Citrus Sinensis ID: 015746

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-
Protein Sequence
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHcccEEEEEcccccccccccccccccccHHHccccEEEEccHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHcccccccccccccEEEEEEHHHHHHHHHHHHcccccccccEEEEcccccccHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccEEccccccccccccccccccccccccccHHHHHccccHHHHcccccccccccccHHHHHHcccccEEEEEEEEccHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccHHHHHHccccccEEEEccHHHHHHHHHcccccEEEEccccccHcHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHccccEEEEEEEEEEcccccccHHHHHHHHHHccccccccccccEEEcEEEHHHHHHHHHHHHccccccccEEEEEcccccEEHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccc
Coil and Loop (DISEMBL)
matlassssslllssppsklaqaslppslrlsfssySHLSslvsispssflacpassrrssvsaFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKEllgsghevtimtvgdensdkmkkppfnrFNEIVsaggktvwgdpaevgnvvGGVTFDVVldnngknldavrpvadwakssgvkQFLFISsagiykpadepphvegdvvkpdaghVQVEKYISENfsnwasfrpqymigsgnnkdceEWFFDRivrkrpvpipgsgmqftniahvRDLSSMLTlavenpeaassNIFNLVSDRAVTLDGMAKLCAQAaglpveivhydpkaagidakkafpfrnmhfyaepraakdilgwrsttnlpeDLKERFEEYVKIGRDKKAMQFEIDDKILEslkvpipv
Flexible Loop (DISEMBL)
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVkasaaekkkvlivntnsgghAVIGFYLAKELLGSGHEVTIMTVgdensdkmkkpPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEpraakdilgwrsttnlpedlkERFEEYVKIGRDKKAMQFEIDDKileslkvpipv
Low Complexity Region (SEG)
MATlassssslllssppsklaqaslppslrlsfssyshlsslvsispssflACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Disordered region (IsUnstruct)
************************************************************************EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV************FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP********GDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI**********
Disordered Region (DISOPRED)
****************************************************************************VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI**
Disordered Region (DISEMBL)
**************************PSLRLSFSSYSHLSSLVSISPSS*******************ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Disordered Region (DISPRO)
*******************************************SISPSSFLACP*****************AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	401	2.2.26 [Sep-21-2011]
Q9LYA9	406	Chloroplast stem-loop bin	yes	no	0.857	0.847	0.823	1e-169
Q9SA52	378	Chloroplast stem-loop bin	no	no	0.783	0.830	0.376	2e-53
Q45291	329	UDP-glucose 4-epimerase O	yes	no	0.605	0.738	0.232	0.0004

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  595 bits (1534), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 284/345 (82%), Positives = 306/345 (88%), Gaps = 1/345 (0%)

Query: 56  SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
           +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct: 60  TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119

Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
           S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239

Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
           GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEAAS NIFN
Sbjct: 240 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 299

Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
            VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAF FRNMHFYAEPRAAKD+L
Sbjct: 300 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLL 359

Query: 355 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
           GW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct: 360 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 404

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  210 bits (534), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/332 (37%), Positives = 180/332 (54%), Gaps = 18/332 (5%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
           SA+ +KK+LI+    GG   IG +L++ L+  GH+VT+ T G   S   K+ P     + 
Sbjct: 49  SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102

Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                K +   GD  +   V   ++   FDVV D NG+  + V P+ +      ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160

Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
            SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G  N   
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220

Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
            EEWFF R+   RP+P+P SG+Q + + HV+DL++   L V   E AS  IFN+  ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279

Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
           T DG+AK CA+A G P  EIVHY+PK      KKAFPFR+ HF+A    AK +LGW+   
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 339

Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
           +L E L + +      G  +K   F  DD IL
Sbjct: 340 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.

Arabidopsis thaliana (taxid: 3702)

>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2

 Score = 46.2 bits (108), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 118/322 (36%), Gaps = 79/322 (24%)

Query: 84  SGGHAVIGFYLAKELLGSGHEVTI-----------------MTVGDENSDKMKKPPFNRF 126
           +GG   +G   A  LL  GH+VTI                 +  GD N    +      F
Sbjct: 6   TGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVLSEGGF 65

Query: 127 NEIVSAGGKTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
             +V    +++ G+  E        NVV  +T           LDA+R       + GV 
Sbjct: 66  EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMR-------AHGVN 108

Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
             +F S+A  Y   D  P  E    +P   +   +  I    +++A        S R   
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168

Query: 233 MIGS----GNNKDCEEWFFDRIV------RKRPV------PIPGSGMQFTNIAHVRDLSS 276
           + G+    G N++ E      ++      R++        P P  G    +  H+ DL+ 
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAK 227

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKK 334
              LA+E+ EA    IFNL S    ++  + ++C +  G  +P E+    P+ AG  A  
Sbjct: 228 AHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVA---PRRAGDPAT- 283

Query: 335 AFPFRNMHFYAEPRAAKDILGW 356
                     A    AK  LGW
Sbjct: 284 --------LIASSEKAKQELGW 297

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	401
224066507	404	predicted protein [Populus trichocarpa]	0.872	0.866	0.874	0.0
224082634	377	predicted protein [Populus trichocarpa]	0.867	0.923	0.876	0.0
225436924	397	PREDICTED: uncharacterized protein At3g6	0.860	0.869	0.847	1e-173
32746733	405	mRNA-binding protein precursor, partial	0.857	0.849	0.828	1e-171
343172519	384	chloroplast stem-loop binding protein, p	0.882	0.921	0.808	1e-171
343172517	384	chloroplast stem-loop binding protein, p	0.882	0.921	0.808	1e-171
449444637	409	PREDICTED: chloroplast stem-loop binding	0.852	0.836	0.830	1e-170
356500206	403	PREDICTED: uncharacterized protein At3g6	1.0	0.995	0.771	1e-169
357440743	401	MRNA-binding protein [Medicago truncatul	0.995	0.995	0.744	1e-169
297821230	408	hypothetical protein ARALYDRAFT_486816 [	0.857	0.843	0.823	1e-169

>gi|224066507|ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa]

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/350 (87%), Positives = 322/350 (92%)

Query: 50  FLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
           F A P  SRR   S+FTVKASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGHEVTI+T
Sbjct: 53  FAAQPICSRRLFTSSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILT 112

Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP 169
           VG+E+SDKMKKPPF+RF+EIVSAGGKTVWG+PAEVG VV G  FDVVLDNNGK+LDAVRP
Sbjct: 113 VGEESSDKMKKPPFSRFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVVLDNNGKDLDAVRP 172

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
           V DWAKS+GVKQFLFISSAGIYK  DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FR
Sbjct: 173 VVDWAKSAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFR 232

Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
           PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH RDLSSMLTLAVENPEAAS
Sbjct: 233 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEAAS 292

Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 349
             IFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK  GIDAKKAFPFRNMHFYAEPRA
Sbjct: 293 GRIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHFYAEPRA 352

Query: 350 AKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
           AK+ILGW+ TTNLPEDLKERF++YVKIGRDKK MQFEIDDKILESLKVP+
Sbjct: 353 AKEILGWQGTTNLPEDLKERFDDYVKIGRDKKPMQFEIDDKILESLKVPV 402

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082634|ref|XP_002306773.1| predicted protein [Populus trichocarpa] gi|222856222|gb|EEE93769.1| predicted protein [Populus trichocarpa]

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/348 (87%), Positives = 322/348 (92%)

Query: 52  ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
           A P  SRR   S+F VKASAAEKKK+LIVNTNSGGHAVIGFY AKELLGSGHEV+I+TVG
Sbjct: 28  AYPTCSRRLFASSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVG 87

Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
           +E+SDKMKKPPF+RF+EIV AGGKTVWG+PAEVG  V G TFDVVLDNNGK+LD VRPV 
Sbjct: 88  EESSDKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVV 147

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
           DWAKS+GVKQFLFISSAGIYKP DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FRPQ
Sbjct: 148 DWAKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQ 207

Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
           YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAHVRDLSSMLTLAVENPEAAS N
Sbjct: 208 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGN 267

Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
           IFN VSDRAVTLDGMAKLCAQAAGLPVEI+HYDPKA GIDAKKAFPFRNMHFYAEPRAAK
Sbjct: 268 IFNCVSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHFYAEPRAAK 327

Query: 352 DILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
           DILGW+ TTNLPEDLKERF+EYVKIGRDKK MQFEIDDKILESLKVP+
Sbjct: 328 DILGWQGTTNLPEDLKERFDEYVKIGRDKKPMQFEIDDKILESLKVPV 375

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436924|ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis vinifera] gi|147789789|emb|CAN73874.1| hypothetical protein VITISV_039540 [Vitis vinifera]

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/348 (84%), Positives = 310/348 (89%), Gaps = 3/348 (0%)

Query: 54  PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
           P S++R S S   VKA   +KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTIMTVG+E
Sbjct: 53  PTSTKRLSFSTLNVKA---QKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEE 109

Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
           NSDKMKKPPF+RF+EI SAGGKTVWGDPAEVG VV G  FDVVLDNNGK++D VRPV DW
Sbjct: 110 NSDKMKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDW 169

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
           AKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAGHV VE YISE F +WA FRPQYM
Sbjct: 170 AKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYM 229

Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
           IGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLTLAVENP AAS NIF
Sbjct: 230 IGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIF 289

Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
           N VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GIDAKKAFPFRNMHFYAEPRAAKDI
Sbjct: 290 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDI 349

Query: 354 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
           LGW   TNLPEDLKERF+EYVKIGRDKK M+FEIDDKILESLKV + V
Sbjct: 350 LGWHGITNLPEDLKERFDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/344 (82%), Positives = 311/344 (90%)

Query: 56  SSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS 115
           S R S+   FTV+ASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGH+VTI+TVG+E+S
Sbjct: 60  SRRFSTFQYFTVQASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESS 119

Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
           DKMKK PFNRF+EI  AGG+T+WGDPA+VG ++ G  FD VLDNNGK+LDAVRPVADWAK
Sbjct: 120 DKMKKTPFNRFSEITGAGGRTIWGDPADVGKILEGEVFDAVLDNNGKDLDAVRPVADWAK 179

Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
           SSG KQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYISE F +WASFRPQYMIG
Sbjct: 180 SSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHVGVEKYISEIFDSWASFRPQYMIG 239

Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
           SGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLT AV+NP AAS +IFN 
Sbjct: 240 SGNNKDCEEWFFDRIVRGRPVPIPGSGMQLTNIAHVRDLSSMLTAAVQNPAAASGHIFNC 299

Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
           VSDRAVTLDGMAKLCA+AAG  VEIVHYDPKA G+DAKKAFPFRNMHFY+EPRAAK+ILG
Sbjct: 300 VSDRAVTLDGMAKLCAKAAGFSVEIVHYDPKAVGVDAKKAFPFRNMHFYSEPRAAKEILG 359

Query: 356 WRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
           W +TTNLPEDLKERF+EYVKIGRDKK M+FE+DDKILE+LKVP+
Sbjct: 360 WSATTNLPEDLKERFDEYVKIGRDKKEMKFELDDKILEALKVPV 403

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172519|gb|AEL98963.1| chloroplast stem-loop binding protein, partial [Silene latifolia]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/355 (80%), Positives = 320/355 (90%), Gaps = 1/355 (0%)

Query: 45  ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
           I P + L  PA  R S+V S+F++ AS   KKKVLIVNT+SGGHAVIGFY AKELLGSGH
Sbjct: 28  IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTSSGGHAVIGFYFAKELLGSGH 87

Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
           +VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG  +FDVVLDNNGK+
Sbjct: 88  QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147

Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
           L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207

Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
           +WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267

Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
           NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNMHF
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327

Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 398
           YAEPRAAK+ILGW+++T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 328 YAEPRAAKEILGWKASTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 382

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172517|gb|AEL98962.1| chloroplast stem-loop binding protein, partial [Silene latifolia]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/355 (80%), Positives = 319/355 (89%), Gaps = 1/355 (0%)

Query: 45  ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
           I P + L  PA  R S+V S+F++ AS   KKKVLIVNTNSGGHAVIGFY AKELL SGH
Sbjct: 28  IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTNSGGHAVIGFYFAKELLASGH 87

Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
           +VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG  +FDVVLDNNGK+
Sbjct: 88  QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147

Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
           L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207

Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
           +WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267

Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
           NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNMHF
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327

Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 398
           YAEPRAAK+ILGW+++T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 328 YAEPRAAKEILGWKASTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 382

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444637|ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Cucumis sativus]

 Score =  602 bits (1553), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 284/342 (83%), Positives = 311/342 (90%)

Query: 58  RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
           R S+V +F+V+AS++ KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTI+TVG+++SDK
Sbjct: 66  RPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDK 125

Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
           M KPPFNRF+EIVS GGKTVWGDPAE+G VV G +FDVVLDNNGK++D VRPV DWAKSS
Sbjct: 126 MNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSS 185

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 237
           GVKQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYI+E FS+WA FRPQYMIGSG
Sbjct: 186 GVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSG 245

Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
           NNKDCEEWFFDRIVR RP+PIPGSGMQ TNIAHVRDLSSMLTLAVE P+ A SNIFN VS
Sbjct: 246 NNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVS 305

Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
            RAVTLDGMAKLCAQAAG PV IVHYDPKA G+DAKKAFPFRNMHFYAEPRAA++ILGW 
Sbjct: 306 GRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWE 365

Query: 358 STTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
            TTNLPEDLKERFEEYVKIGRDKKA++FE+DDKILESL VP+
Sbjct: 366 GTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPV 407

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500206|ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like [Glycine max]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/403 (77%), Positives = 349/403 (86%), Gaps = 2/403 (0%)

Query: 1   MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPAS--SR 58
           MAT+ASSSS++L S+  S L   S P + RLSFSS  H SS       SFL+  +S  + 
Sbjct: 1   MATIASSSSTVLFSASSSNLLPFSHPSTSRLSFSSSLHSSSFSLSISPSFLSYYSSSSTH 60

Query: 59  RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
            ++ +AF++ ASAAEKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVG+E SDKM
Sbjct: 61  FATHAAFSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKM 120

Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
           KKPPFNRF+EIVSAGG+TVWG+PAEVG+VVGG  FDVVLDNNGK+L+ VRPV DWAKSSG
Sbjct: 121 KKPPFNRFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKDLETVRPVIDWAKSSG 180

Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
           VKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI E F +WA FRPQYMIGSGN
Sbjct: 181 VKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSWAVFRPQYMIGSGN 240

Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
           NKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSMLTLAVENPEAA+  IFN VSD
Sbjct: 241 NKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCVSD 300

Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
           RAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPFR  HFYAEPRAAK  LGW+S
Sbjct: 301 RAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPFRTYHFYAEPRAAKAKLGWQS 360

Query: 359 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
           TTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP+ V
Sbjct: 361 TTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357440743|ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 300/403 (74%), Positives = 338/403 (83%), Gaps = 4/403 (0%)

Query: 1   MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPA--SSR 58
           MA LASSS +LL +S  S L    L  S  L  S  S L S      S+FL+ P+  S R
Sbjct: 1   MAMLASSSPTLLFTSTSSNLLP--LSHSCTLRLSFSSSLQSTSLSISSTFLSHPSLTSKR 58

Query: 59  RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
            ++ +  ++ ASAAEKKKVLI+NTNSGGHAVIGFY AKELLG+GH VTI+TVGDE+SDKM
Sbjct: 59  LANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKM 118

Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
           KKPPFNRF+EIVSAGG TVWG+PA+VG+VVGG  FDVVLDNNGK+L++VRPV DWAKS+G
Sbjct: 119 KKPPFNRFSEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNNGKDLESVRPVIDWAKSAG 178

Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
            KQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYI E F +WA FRPQYM GSGN
Sbjct: 179 AKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYIEETFDSWAVFRPQYMTGSGN 238

Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
           NKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSMLTLAVENP+AA+ +IFN VSD
Sbjct: 239 NKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSMLTLAVENPDAANHSIFNCVSD 298

Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
           RAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPFRN+HFYAEPRAAK  LGW S
Sbjct: 299 RAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPFRNVHFYAEPRAAKTKLGWSS 358

Query: 359 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
           TTNLPEDLKERFEEY+KIGRDKK ++FE+DDKILE+LKVP+ V
Sbjct: 359 TTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVPVSV 401

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821230|ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]

 Score =  599 bits (1544), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 284/345 (82%), Positives = 308/345 (89%), Gaps = 1/345 (0%)

Query: 56  SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
           +SRR S   FTVKAS+  +KK VLIVNTNSGGHAVIGFY AKELL +GH VTIMTVGDE+
Sbjct: 62  TSRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDES 121

Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
           SDKMKKPPFNRF+EI+S GGKTVWG+PA+V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 122 SDKMKKPPFNRFSEIISGGGKTVWGNPADVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 181

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 182 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWASFRPQYMI 241

Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
           GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NP+AAS NIFN
Sbjct: 242 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPKAASGNIFN 301

Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
            VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAFPFRNMHFYAEPRAAK+IL
Sbjct: 302 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFPFRNMHFYAEPRAAKEIL 361

Query: 355 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
           GW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct: 362 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 406

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	401
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.857	0.847	0.823	2.8e-153
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.783	0.830	0.373	2.7e-52
WB|WBGene00018737	342	F53B1.4 [Caenorhabditis elegan	0.483	0.567	0.213	0.00031

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 1495 (531.3 bits), Expect = 2.8e-153, P = 2.8e-153
 Identities = 284/345 (82%), Positives = 306/345 (88%)

Query:    56 SSRRSSVSAFTVKASAA-EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
             +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct:    60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119

Query:   115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
             S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct:   120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179

Query:   175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
             KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct:   180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239

Query:   235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
             GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEAAS NIFN
Sbjct:   240 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 299

Query:   295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
              VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAF FRNMHFYAEPRAAKD+L
Sbjct:   300 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLL 359

Query:   355 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
             GW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct:   360 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 404

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 124/332 (37%), Positives = 180/332 (54%)

Query:    70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
             SA+ +KK+LI+    GG   IG +L++ L+  GH+VT+ T G   S   K+ P     + 
Sbjct:    49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102

Query:   130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                  K +   GD  +   V   ++   FDVV D NG+  + V P+ +      ++Q+++
Sbjct:   103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160

Query:   185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
              SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G  N   
Sbjct:   161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220

Query:   242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
              EEWFF R+   RP+P+P SG+Q + + HV+DL++     + N E AS  IFN+  ++ V
Sbjct:   221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGN-EKASREIFNISGEKYV 279

Query:   302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
             T DG+AK CA+A G P  EIVHY+PK      KKAFPFR+ HF+A    AK +LGW+   
Sbjct:   280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 339

Query:   361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
             +L E L + +      G  +K   F  DD IL
Sbjct:   340 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

WB|WBGene00018737 F53B1.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
 Identities = 45/211 (21%), Positives = 86/211 (40%)

Query:   178 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 233
             GVK+ + IS+  +Y  +  D  P  E   +          K   E    S W S++  Y+
Sbjct:   128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187

Query:   234 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
             +   NN         +++ K        +P P+ G G+   +  +V D S  +T      
Sbjct:   188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245

Query:   286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
             E     I+N+ +D  +T   + K+         ++++ +P A         P+ +  +Y 
Sbjct:   246 EGTLGEIYNIGTDFEMTNIELTKMIHFTVS---KLLNREPTAPTFAPIPDRPYHDRRYYI 302

Query:   346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
             +    ++ +GW+ TT   E L +  + YVK+
Sbjct:   303 DFSKIRNAMGWQCTTPFSEGLMKTIDYYVKL 333


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      401       353   0.00079  117 3  11 22  0.42    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  238 KB (2129 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.42u 0.08s 29.50t   Elapsed:  00:00:03
  Total cpu time:  29.42u 0.08s 29.50t   Elapsed:  00:00:03
  Start:  Mon May 20 20:34:09 2013   End:  Mon May 20 20:34:12 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0040017 "positive regulation of locomotion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LYA9	CP41A_ARATH	No assigned EC number	0.8231	0.8578	0.8472	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	401
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	0.0
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	3e-51
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-26
cd08946	200	cd08946, SDR_e, extended (e) SDRs	6e-17
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-14
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-10
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	6e-10
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	5e-09
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	1e-08
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	5e-08
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-07
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	5e-07
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	9e-07
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	5e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-06
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	8e-06
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	9e-06
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	3e-05
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-05
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	5e-05
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-04
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	5e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	8e-04
pfam07992	283	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulp	8e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.001
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	0.002
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	0.003
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	0.004

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  629 bits (1625), Expect = 0.0
 Identities = 242/379 (63%), Positives = 279/379 (73%), Gaps = 1/379 (0%)

Query: 23  ASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNT 82
           A     LR S +S    SS  S    +  A    SRR+S  A    A+A EKKKVLIVNT
Sbjct: 1   ALSSSRLRSSSASSLLSSSSSSSISPALAARAQGSRRASQVAGAAAAAAVEKKKVLIVNT 60

Query: 83  NSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
           NSGGHA IGFYLAKEL+ +GHEVT+ T G E S KMKK PF+RF+E+ SAG KTVWGDPA
Sbjct: 61  NSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPA 120

Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
           +V + V G  FDVV DNNGK+LD V PVADWAKS G+KQFLF SSAG+YK +DEPPHVEG
Sbjct: 121 DVKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG 180

Query: 203 DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 262
           D VKP AGH++VE Y+ +   NW SFRPQY+ G GNNKDCEEWFFDR+VR RPVPIPGSG
Sbjct: 181 DAVKPKAGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSG 240

Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
           +Q T + HV+DL+SM  L V NP+AA   IFN+VSDRAVT DGMAK CA+AAG P EIVH
Sbjct: 241 IQLTQLGHVKDLASMFALVVGNPKAA-GQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVH 299

Query: 323 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA 382
           YDPKA G  AKKAFPFR+ HF+A PR AK+ LGW    +L EDLK+R+E Y   GRD+K 
Sbjct: 300 YDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDRKE 359

Query: 383 MQFEIDDKILESLKVPIPV 401
             FE DDKILE L VP+  
Sbjct: 360 ADFETDDKILEKLGVPVAA 378

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  172 bits (437), Expect = 3e-51
 Identities = 86/267 (32%), Positives = 120/267 (44%), Gaps = 34/267 (12%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            K+LI+    GG   IG  L +ELL +GH+VT+   G       +  P       +  G 
Sbjct: 1   MKILII----GGTRFIGKALVEELLAAGHDVTVFNRG-------RTKP------DLPEGV 43

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           + + GD      +  ++GG  FDVV+D        V    D  K   VKQ++FISSA +Y
Sbjct: 44  EHIVGDRNDRDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGR-VKQYIFISSASVY 102

Query: 192 KPADEP-----PHVEGDVVKPD------AGHVQVEKYISENFS-NWASFRPQYMIGSGNN 239
                      P  E D V          G    E  + E  +  +   RP Y+ G G+ 
Sbjct: 103 LKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDY 162

Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
                +FFDR+ R RP+ +PG G       HV+DL+  L  A  NP+A    IFN+  D 
Sbjct: 163 TGRLAYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAI-GGIFNITGDE 221

Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPK 326
           AVT D + + CA+A G   EIVH +  
Sbjct: 222 AVTWDELLEACAKALGKEAEIVHVEED 248

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  107 bits (269), Expect = 2e-26
 Identities = 67/324 (20%), Positives = 126/324 (38%), Gaps = 37/324 (11%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            ++L+     GG   IG +L + LL +GH+V  +    +  D +         ++     
Sbjct: 1   MRILVT----GGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDL 56

Query: 135 --KTVWGDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFISS 187
             +   G P  V ++    +      ++       N+D    + + A+++GVK+F+F SS
Sbjct: 57  VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASS 116

Query: 188 AGIYKPADEPPHVEGDVVKPD------AGHVQVEKYISENFS----NWASFRPQYMIGSG 237
             +      P  ++ D+  P          +  E+ +              RP  + G G
Sbjct: 117 VSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPG 176

Query: 238 NNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
           +  D         +R     +  + I G G Q  +  +V D++  L LA+ENP+     +
Sbjct: 177 DKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG---V 233

Query: 293 FNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
           FN+ S    +T+  +A+  A+A G    ++ Y P     D +            +   A+
Sbjct: 234 FNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLR-------EGKLLDISKAR 286

Query: 352 DILGWRSTTNLPEDLKERFEEYVK 375
             LGW    +L E L +  E  +K
Sbjct: 287 AALGWEPKVSLEEGLADTLEWLLK 310

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 78.5 bits (194), Expect = 6e-17
 Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 46/226 (20%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTV---WGD 140
           GG   IG +L + LL  GHEV +                +R + +V  A    V   W +
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVV---------------IDRLDVVVHLAALVGVPASWDN 49

Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
           P E         F+        N+     + + A+ +GVK+F++ SSA +Y   +  P  
Sbjct: 50  PDE--------DFET-------NVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEE 94

Query: 201 EGDVVKPD----AGHVQVEKYISENFSNW----ASFRPQYMIGSGNNKDCEEW---FFDR 249
           E    +P        +  E  +     ++       R   + G G     +     F  R
Sbjct: 95  EETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRR 154

Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
            +  +P+ + G G Q  +  HV D+   +  A+ENP      ++N+
Sbjct: 155 ALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENP-LEGGGVYNI 199

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 49/250 (19%)

Query: 77  VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
           +L+     GG   IG +L + LL  G+EV ++                R   + +   + 
Sbjct: 1   ILVT----GGTGFIGSHLVRRLLQEGYEVIVLGRR------------RRSESLNTGRIRF 44

Query: 137 VWGD---PAEVGNVVGGVTFDVVL--------DNNGK--------NLDAVRPVADWAKSS 177
             GD   P  +  ++  V  D V+          + +        N+     + + A+ +
Sbjct: 45  HEGDLTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRA 104

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
           GVK+F+F SS+ +Y    +PP  E   + P         A    VE Y           R
Sbjct: 105 GVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILR 164

Query: 230 PQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
              + G GN              RI+  +P+ + G G Q  +  +V D++  + LA+E+P
Sbjct: 165 LFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHP 224

Query: 286 EAASSNIFNL 295
           +     I+N+
Sbjct: 225 DG--GEIYNI 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 27/214 (12%)

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--------- 224
           A+ +GVK+F++ SS+ +Y      P  E     P + +  V KY  E +           
Sbjct: 104 ARKAGVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPY-AVSKYAGELYCQVFARLYGLP 162

Query: 225 WASFRPQYMIGSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
             S R   + G   + +         F +R ++  P  I G G Q  +  +V D+     
Sbjct: 163 TVSLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANL 222

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
           LA      A   ++N+ + +  +++ +A+L  +  G  +E V+  P+   +         
Sbjct: 223 LAATA--GAGGEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVR-------- 272

Query: 340 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
             H  A+   AK +LGW    +  E L+   E +
Sbjct: 273 --HSLADISKAKKLLGWEPKVSFEEGLRLTVEWF 304

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 51/283 (18%), Positives = 95/283 (33%), Gaps = 68/283 (24%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-------RFNEIVSAGGKTV 137
           G    IG Y+   L   G +V +    +    +      +        F+          
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAY-ARRLLVMGDLGQVLFVEFDLR-------- 57

Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFI 185
             D   +   + G   DVV++  G+            +++    +A  AK +GV++ + I
Sbjct: 58  --DDESIRKALEGS--DVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHI 113

Query: 186 SSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMIGSGN 238
           S+ G             D   P         G    E+ + E F      RP  + G  +
Sbjct: 114 SALGA------------DANSPSKYLRSKAEG----EEAVREAFPEATIVRPSVVFGRED 157

Query: 239 NKDCEEWFFDRIVRKR---PVPIPGSGMQ--FTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                  F +R  +     P P    G Q  F  + +V D++  +  A+++PE      +
Sbjct: 158 R------FLNRFAKLLAFLPFPPLIGGGQTKFQPV-YVGDVAEAIARALKDPETEGK-TY 209

Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 336
            LV  +  TL  + +L  +  G    ++      A + A+   
Sbjct: 210 ELVGPKVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKL 252

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 41/177 (23%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV----WGD 140
           G     G  L KELL  GH+VT                 +R      A G T       D
Sbjct: 5   GATGKTGRRLVKELLARGHQVT---------------ALSRNPSKAPAPGVTPVQKDLFD 49

Query: 141 PAEVGNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
            A++   + G   D V+D  G    + D V+ + D A  +GV++ + +S+AG+Y    + 
Sbjct: 50  LADLAEALAG--VDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLY---RDE 104

Query: 198 PHVEGDVVKPDAGHV-----QVEKYISENFSNWASFRP---------QYMIGSGNNK 240
           P        P            E+ +  +  +W   RP          Y IG+  + 
Sbjct: 105 PGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEGETYEIGTEGDP 161

Length = 182

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 40/267 (14%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
           GG   IG +L   LL  G+EV ++    +N    ++       E  +   + V  D  + 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVV----DNLSSGRRENIEPEFENKAF--RFVKRDLLDT 59

Query: 145 GNVVGGVTFDVVLD-------NNG---------KNLDAVRPVADWAKSSGVKQFLFISSA 188
            + V     D V           G         +N+ A   V +  +++GVK+ +F SS+
Sbjct: 60  ADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSS 119

Query: 189 GIYKPADEPPHVEGDVVKP----DAGHVQVEKYISEN-----FSNWASFRPQYMIGSGNN 239
            +Y  A   P  E     P     A  +  E  IS       F  W  FR   ++G  + 
Sbjct: 120 TVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWI-FRFANIVGPRST 178

Query: 240 KDCEEWFFDRI--VRKRP--VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
                  +D I  +++ P  + + G G Q  +  +V D    + LA E       NIFNL
Sbjct: 179 HGV---IYDFINKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEG-VNIFNL 234

Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVH 322
            +D  ++++ +A++  +  GL     +
Sbjct: 235 GNDDTISVNEIAEIVIEELGLKPRFKY 261

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 54.0 bits (130), Expect = 5e-08
 Identities = 74/349 (21%), Positives = 129/349 (36%), Gaps = 91/349 (26%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---------- 124
           ++ L+    +G    IG +LA+ L   GH V       ++ + M +P  +          
Sbjct: 1   QRALV----TGAGGFIGSHLAERLKAEGHYVRG--ADWKSPEHMTQPTDDDEFHLVDLRE 54

Query: 125 -RFNEIVSAGGKTVWGDPAEVG-------NVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
                  + G   V+   A++G       N    +  + +++ N   L+A       A+ 
Sbjct: 55  MENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFN--MLEA-------ARI 105

Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVK-------PDAGH--VQVEKYISENFSNWAS 227
           +GV++FLF SSA +Y P  +   +E  VV+       P         EK  +E       
Sbjct: 106 NGVERFLFASSACVY-PEFK--QLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQ--H 160

Query: 228 FRPQYMIGSGNNKDC------------EEWFFDR------IVRK-------RPVPIPGSG 262
           +   Y I      +               W   R      + RK           I G G
Sbjct: 161 YNEDYGI------ETRIVRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDG 214

Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
           +Q  +  ++ D    L   +E+         NL SD  V+++ +A++    +G P+EI+H
Sbjct: 215 LQTRSFTYIDDCVEGLRRLMESDFGEP---VNLGSDEMVSMNELAEMVLSFSGKPLEIIH 271

Query: 323 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
           + P   G+        RN    ++    K+ LGW   T L E L+  + 
Sbjct: 272 HTPGPQGVRG------RN----SDNTLLKEELGWEPNTPLEEGLRITYF 310

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 50/237 (21%), Positives = 88/237 (37%), Gaps = 33/237 (13%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG 149
           +G  + + LL     V  + V +      K   F   + +    G   + DP  +     
Sbjct: 10  LGTAVVELLLAKVASVVAL-VRNPE----KAKAF-AADGVEVRQGD--YDDPETLERAFE 61

Query: 150 GVTFDVVL----DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
           GV  D +L     +    +   +   D AK +GVK  +++S++G     D P  +  D  
Sbjct: 62  GV--DRLLLISPSDLEDRIQQHKNFIDAAKQAGVKHIVYLSASGA--DEDSPFLLARD-- 115

Query: 206 KPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ 264
                H   EKY+  +   +   RP  +M       D    F   I+ +  +  P  G  
Sbjct: 116 -----HGATEKYLEASGIPYTILRPGWFM-------DNLLEFLPSILEEGTIYGPA-GDG 162

Query: 265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
                  RD++     A+  P      ++NL    A++   +A + ++A G PV  V
Sbjct: 163 KVAFVDRRDIAEAAAAALTEPGHE-GKVYNLTGPEALSYAELAAILSEALGKPVRYV 218

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 5e-07
 Identities = 52/234 (22%), Positives = 81/234 (34%), Gaps = 40/234 (17%)

Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEP-PHVEGDVVKPDAGH------VQV 214
           N+D  + V D   ++GV + +  SS  +Y    D P P  E   ++            +V
Sbjct: 86  NVDGTQNVLDACAAAGVPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEV 145

Query: 215 EKYISENFS-----NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
           E+ ++E        N    RP  ++G G         F    R           QF    
Sbjct: 146 EQLLAEFRRRHPELNVTVLRPATILGPGT--RNTTRDFLSPRRLPVPGGFDPPFQFL--- 200

Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
           H  D++  L LAV    A ++ IFN+  D  V L  +  L       PV +    P  A 
Sbjct: 201 HEDDVARALVLAV---RAGATGIFNVAGDGPVPLSLVLALL---GRRPVPLPS--PLPAA 252

Query: 330 IDAKKAFPFRN-----MHFYAEP-----RAAKDILGWRSTTNLPEDLKERFEEY 373
           + A +    R      + F   P       A+  LGW+          E   ++
Sbjct: 253 LAAARRLGLRPLPPEQLDFLQYPPVMDTTRARVELGWQPK----HTSAEVLRDF 302

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 50.0 bits (120), Expect = 8e-07
 Identities = 57/325 (17%), Positives = 117/325 (36%), Gaps = 62/325 (19%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VLIV    GG+  IG +L   LL  G +V +          +          +    G 
Sbjct: 1   RVLIV----GGNGFIGSHLVDALLEEGPQVRVF------DRSIPPYELPL-GGVDYIKGD 49

Query: 136 TVWGDPAEVGNVVGG-------VTFDVVLDNNG-------KNLDAVRPVADWAKSSGVKQ 181
               + A++ + + G        +      +N         N+     + +   ++G+ +
Sbjct: 50  Y--ENRADLESALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGK 107

Query: 182 FLFISSAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWASFRPQY 232
            +F SS G +Y   ++ P  E D   P + +    + +EKY+         ++   R   
Sbjct: 108 IIFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISN 167

Query: 233 MIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
             G G   D ++       ++I+R  P+ I G G    +  ++ DL   L   + +    
Sbjct: 168 PYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRS--KG 225

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI-----DAKKAFPFRNMHF 343
              +FN+ S    +L  +     +  G  V++++   +   +     D  +         
Sbjct: 226 LEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPARTTDVPKIVLDISR--------- 276

Query: 344 YAEPRAAKDILGWRSTTNLPEDLKE 368
                 A+  LGW    +L + L++
Sbjct: 277 ------ARAELGWSPKISLEDGLEK 295

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 18/153 (11%)

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
           V D AK +GV+ F+F S   + K     PH +    K      +VE+YI  +       R
Sbjct: 90  VVDAAKRAGVQHFVFSSVPDVEKLTLAVPHFDS---K-----AEVEEYIRASGLPATILR 141

Query: 230 PQ-YMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGM-QFTNIAHVRDLSSMLTLAVENPE 286
           P  +M     N         ++      + +P     +   I  V D+   +    ++P 
Sbjct: 142 PAFFM----EN-FLTPPAPQKMEDGTLTLVLPLDPDTKLPMID-VADIGPAVAAIFKDPA 195

Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
             +     L  D  +T + +A   ++  G PV 
Sbjct: 196 KFNGKTIELAGDE-LTPEEIAAAFSKVLGKPVT 227

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 53/273 (19%), Positives = 89/273 (32%), Gaps = 79/273 (28%)

Query: 77  VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
           VLI+     G   +G  LA++LL  G +VT  T   E      K   +R   +       
Sbjct: 1   VLIL-----GCGYLGQRLARQLLAQGWQVTGTTRSPE------KLAADRPAGVTPLAADL 49

Query: 137 VWGDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVAD-----WAKSSGVKQFLFISS 187
               P  + +V      D ++ +     G       P         A+   V++ +++SS
Sbjct: 50  T--QPGLLADV------DHLVISLPPPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSS 101

Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF- 246
            G+Y                D     V++    N S       + ++      + E+   
Sbjct: 102 TGVY---------------GDQQGEWVDETSPPNPST---ESGRALL------EAEQALL 137

Query: 247 ----------------------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
                                   R+ +    P  G+    TN  HV DL   L  A++ 
Sbjct: 138 ALGSKPTTILRLAGIYGPGRHPLRRLAQGTGRPPAGN--APTNRIHVDDLVGALAFALQR 195

Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
           P      ++N+V D  VT     +  A+  GLP
Sbjct: 196 PAP--GPVYNVVDDLPVTRGEFYQAAAELLGLP 226

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 21/156 (13%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
           G    IG  LA+ELL  GHEVT++     N+ ++ K       E V+     +  D   +
Sbjct: 5   GATGFIGRALARELLEQGHEVTLL---VRNTKRLSKE----DQEPVAVVEGDL-RDLDSL 56

Query: 145 GNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
            + V GV  DVV+          D    +++  R V + AK +GVK F+FISS G Y   
Sbjct: 57  SDAVQGV--DVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDL 114

Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
            E            A   + E  + E    +   RP
Sbjct: 115 HEETEPSPS-SPYLAVKAKTEAVLREASLPYTIVRP 149

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 47.0 bits (112), Expect = 8e-06
 Identities = 55/310 (17%), Positives = 105/310 (33%), Gaps = 53/310 (17%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
           G    IG  + +EL+ +GHEV  +   D  + K++           +AG +   GD  ++
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLE-----------AAGAQVHRGDLEDL 55

Query: 145 GNVVGGVT---------FDVVLDNNGKN--LD--AVRPVADWAKSSGVKQFLFISSAGIY 191
             +              F    DN  +   +D  A+  + +  + +G K  ++ S   + 
Sbjct: 56  DILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTG-KPLIYTSGIWLL 114

Query: 192 KP------ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
            P       +E P                 +             P  + G G+       
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALELAERGVRASVVRLPPVVHGRGD-----HG 169

Query: 246 FF----DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
           F          K      G G       H  D + +  LA+E  +A S  +++ V++  +
Sbjct: 170 FVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGS--VYHAVAEEGI 227

Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF----PFRNMHFYAEPRAAKDILGWR 357
            +  +A+   +  G+PV  +  +      +A   F     F  +      +  +  LGW+
Sbjct: 228 PVKDIAEAIGRRLGVPVVSIPAE------EAAAHFGWLAMFVALDQPVSSQKTRRRLGWK 281

Query: 358 ST-TNLPEDL 366
               +L EDL
Sbjct: 282 PQQPSLLEDL 291

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 46.6 bits (111), Expect = 9e-06
 Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 44/270 (16%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---- 140
           GG   +G +L K LL +G +V ++   +   +  ++          +   + + GD    
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLE---ADRVRVLEGDLTQP 61

Query: 141 -----PAEVGNVVGGVT----FDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLF 184
                 A    + G V          D           N+D    V + A    +++F +
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRFHY 121

Query: 185 ISSA---GIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISENF-------SNWASFRPQYM 233
           +S+A   G  +    E      +  +      +  K  +E              +RP  +
Sbjct: 122 VSTAYVAGNREGNIRETEL---NPGQNFKNPYEQSKAEAEQLVRAAATQIPLTVYRPSIV 178

Query: 234 IGSGNNKDCEE----WFFDRIVRKRP--VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
           +G       E+    +    ++ K    +P+PG+     N+  V  ++  +    + PEA
Sbjct: 179 VGDSKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLSKKPEA 238

Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
               IF+L      TL  +A L   A   P
Sbjct: 239 N-GQIFHLTDPTPQTLREIADLFKSAFLSP 267

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 56/246 (22%), Positives = 84/246 (34%), Gaps = 65/246 (26%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           KVL+V    G    +G ++ +ELL  G++V  +                R      A   
Sbjct: 1   KVLVV----GATGKVGRHVVRELLDRGYQVRALV---------------RDPS--QAEKL 39

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV----------------------RPVADW 173
              G  AEV  VVG +T    L    + +DAV                        + D 
Sbjct: 40  EAAG--AEV--VVGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDA 95

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
           AK +GVK+F+ +SS G  KP   P    G  +  DA     E Y+  +  ++   RP   
Sbjct: 96  AKKAGVKRFVLVSSIGADKP-SHPLEALGPYL--DAKRK-AEDYLRASGLDYTIVRPG-- 149

Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                         D       V + G G +        D++ +L  A++ P A     F
Sbjct: 150 -----------GLTDDPAGTGRVVLGGDGTRLDGPISRADVAEVLAEALDTPAAI-GKTF 197

Query: 294 NLVSDR 299
            L    
Sbjct: 198 ELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 38/264 (14%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT----VGDENSDKMKKPPFNRFNEIVS 131
           KVL+    +G +  IG  L  +LL  G EV I        + +    + P  + F ++  
Sbjct: 1   KVLV----TGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDSFTDLF- 55

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS---- 187
             G       A   +V+     D + D    N +  R +A  A   GVK+F+F+SS    
Sbjct: 56  -LGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLSSVKVN 114

Query: 188 --AGIYKPADE--PPHVEGD--VVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---GN 238
               +  P DE  PP  +      K +A    +E   S+        RP  + G    GN
Sbjct: 115 GEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEV-VILRPPMVYGPGVRGN 173

Query: 239 NKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
                   F R++R   R +P+P G+     ++  + +L   + L +  P  A++  F L
Sbjct: 174 --------FARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLP-KAANGTF-L 223

Query: 296 VSD-RAVTLDGMAKLCAQAAGLPV 318
           VSD   V+   +     +A G P 
Sbjct: 224 VSDGPPVSTAELVDEIRRALGKPT 247

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 32/166 (19%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN 146
            G  + +E L  GHEVT +     +  K+                K V GD     +V  
Sbjct: 11  TGSAIVREALARGHEVTALVR---DPAKLP---------AEHEKLKVVQGDVLDLEDVKE 58

Query: 147 VVGGVTFDVVLD--NNGKNL-------DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
            + G   D V+       +L       +  R +    K++GVK+ + +  AG      + 
Sbjct: 59  ALEG--QDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDDRPKV 116

Query: 198 PHVEGDVVKPD------AGHVQVEKYISENFSNWASFRPQYMIGSG 237
             V   ++ P         H ++ K + E+  +W + RP  +   G
Sbjct: 117 TLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGG 162

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 15/128 (11%)

Query: 245 WFFDRIVRKRPVPIPGSG-MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR--AV 301
           +F    V  +P+ I G G  Q  ++ H  DL ++     +NP+     +FN+   R  +V
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSV 275

Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY-AEPRAAKDILGWRSTT 360
           +L  +  LC +  G  +E    D    G          +  +Y ++ R  K+  GW+   
Sbjct: 276 SLLELIALCEEITGRKMESY-KDENRPG----------DQIWYISDIRKIKEKPGWKPER 324

Query: 361 NLPEDLKE 368
           +  E L E
Sbjct: 325 DPREILAE 332

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 44/240 (18%), Positives = 77/240 (32%), Gaps = 32/240 (13%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG 149
           +G  + +ELL  GHEV       E +  +         E+V         DP  +     
Sbjct: 12  VGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGD----LRDPKSLVAGAK 62

Query: 150 GVTFDVVL-----DNNGKNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG 202
           GV   +++      ++      V  V   A+++  GVK  + +S  G    +        
Sbjct: 63  GVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALA--- 119

Query: 203 DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 262
                      VE  +  +   + + R               +         PV   G G
Sbjct: 120 ------RAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGLPVIPRGIG 169

Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
               +   V D++  L  A++ P  A    + L    A+TL  +A       G PV ++ 
Sbjct: 170 R--LSPIAVDDVAEALAAALDAPATA-GRTYELAGPEALTLAELASGLDYTIGRPVGLIP 226

Length = 275

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 52/295 (17%), Positives = 94/295 (31%), Gaps = 99/295 (33%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K++I    +GG   IG  L + L  +GHEV +++         ++P      +       
Sbjct: 1   KIVI----TGGTGFIGRALTRRLTAAGHEVVVLS---------RRPG-----KAEGLAEV 42

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNL------------------DAVRPVADWAKSS 177
             W   +     + G   D V++  G+ +                  ++ R + +   ++
Sbjct: 43  ITWDGLSLGPWELPGA--DAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANA 100

Query: 178 GVKQFLFI--SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
                + I  S+ G Y  + +    E                  ++F             
Sbjct: 101 PAPPKVLISASAVGYYGHSGDEVLTE-------------NSPSGKDFL------------ 135

Query: 236 SGNNKDCEEWFFD------RIVRKRPVPI--PGSGM--------------------QFTN 267
           +   K  E+          R+V  R   +  P  G                     Q+ +
Sbjct: 136 AEVCKAWEKAAQPASELGTRVVILRTGVVLGPDGGALPKMLLPFRLGLGGPLGSGRQWMS 195

Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA----AGLPV 318
             H+ DL  ++  A+ENP+   S   N V+   VT     K   +A    AGLPV
Sbjct: 196 WIHIDDLVRLIEFAIENPD--LSGPVNAVAPNPVTNAEFTKALGRALHRPAGLPV 248

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|219686 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 59  RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
           R  + +  +       K+V++V    GG   IG  LA  L   G EVT++   D    + 
Sbjct: 127 RGVIDSDEILELLELPKRVVVV----GG-GYIGLELAAALAKLGKEVTVVERRDRLLARA 181

Query: 119 KKPPFNRFNE-IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDA--------VRP 169
                    E +              V   VG      V   +G+ LDA         RP
Sbjct: 182 DDEISAALLEKLEKLLLGVTVLLVVVVVVKVGDGKVVEVKLGDGEELDADVVLVAIGRRP 241

Query: 170 VADWAKSSGVK 180
             +  + +GV+
Sbjct: 242 NTELLEQAGVE 252

This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain. Length = 283

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 52/265 (19%), Positives = 93/265 (35%), Gaps = 50/265 (18%)

Query: 79  IVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW 138
           I+ T + G   IG  +A  LL +G  V  +   DE           R   + + G + V 
Sbjct: 1   ILVTGATGR--IGSKVATTLLEAGRPVRALVRSDE-----------RAAALAARGAEVVV 47

Query: 139 GDPAEVGNV------VGGVTF----DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
           GD  +   +      V  V F        D     + A    A   + +GVK+ + +SS 
Sbjct: 48  GDLDDPAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSV 107

Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
           G   P      +         GH  +E+ ++         RP + +        E     
Sbjct: 108 GA-DPESPSGLIR--------GHWLMEQVLNWAGLPVVHLRPAWFM--------ENLLSQ 150

Query: 249 -RIVRKR---PVPIPGSGMQFTNIAHV--RDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
              +RK     +P PG G     +  +   D++ +    + +PE     ++ L     +T
Sbjct: 151 APSIRKAGVLALPFPGDGR----LPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLT 206

Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKA 327
           ++ +A   ++  G PV  V    + 
Sbjct: 207 MNEIAAALSRVLGRPVRYVPVPEEQ 231

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 46/185 (24%), Positives = 72/185 (38%), Gaps = 55/185 (29%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
            VL+  ++ G    IGF +A+ELL  G  V I +  +EN +K  K       E+   G  
Sbjct: 2   NVLVTASSRG----IGFNVARELLKKGARVVISSRNEENLEKALK-------ELKEYGEV 50

Query: 135 ---KTVWGDPAEVGNVV-------GGVTFDVVLDNNGK--------------------NL 164
              K    D  ++ N+V       GG+  D ++ N G                      L
Sbjct: 51  YAVKADLSDKDDLKNLVKEAWELLGGI--DALVWNAGNVRCEPCMLHEAGYSDWLEAALL 108

Query: 165 DAVRP-------VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 217
             V P       +  W +       +++SS  + +P   PP V  DV +  AG VQ+ K 
Sbjct: 109 HLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM--PPLVLADVTR--AGLVQLAKG 164

Query: 218 ISENF 222
           +S  +
Sbjct: 165 VSRTY 169

Length = 259

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 65/269 (24%), Positives = 100/269 (37%), Gaps = 74/269 (27%)

Query: 148 VGGVTFDVVLDNNGKNLDAVRP-------VADWAKSSGVKQFLFISSAGIY-----KPAD 195
           VGG+       N     D +R        V   A   GVK+ +F+ S+ IY     +P D
Sbjct: 62  VGGIVA-----NMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSSCIYPDLAPQPID 116

Query: 196 E------PPHV--EGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
           E      PP    EG  +   AG    E Y  +   ++ S  P  + G  +N       F
Sbjct: 117 ESDLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDYISVMPTNLYGPHDN-------F 169

Query: 248 D--------RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
           D         ++RK         + V + GSG       +  DL+  +   +EN +    
Sbjct: 170 DPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDLARAIVFLLENYD--EP 227

Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP-KAAGIDAKKAFPFRNMHFYAEPRA 349
            I N+ S   +++  +A+  A+  G   EIV +D  K  G                 PR 
Sbjct: 228 IIVNVGSGVEISIRELAEAIAEVVGFKGEIV-FDTSKPDGQ----------------PRK 270

Query: 350 AKDI-----LGWRSTTNLPEDLKERFEEY 373
             D+     LGW   T L + ++E +E Y
Sbjct: 271 LLDVSKLRALGWFPFTPLEQGIRETYEWY 299

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 46/237 (19%), Positives = 84/237 (35%), Gaps = 60/237 (25%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF----NRFNEIV 130
           K  L++    G   ++G +L +ELL S +   +  +        +K  F     +  +IV
Sbjct: 1   KTALVL----GATGLVGKHLLRELLKSPYYSKVTAIV------RRKLTFPEAKEKLVQIV 50

Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVL-------------DNNGK-NLDAVRPVADWAKS 176
               + +        N       DV               +N  K + D V  +A  AK+
Sbjct: 51  VDF-ERLDEYLEAFQNP------DVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKA 103

Query: 177 SGVKQFLFISSAGIYKPADEP-----PHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRP 230
           +GV+ FL +SS G    AD         V+G          +VE+ + +  F     FRP
Sbjct: 104 AGVQHFLLVSSLG----ADPKSSFLYLKVKG----------EVERDLQKLGFERLTIFRP 149

Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS-SMLTLAVENPE 286
             ++G        E    +++R     +   G           ++ +M+  A++   
Sbjct: 150 GLLLGERQESRPGERLAQKLLR----ILSPLGFPKYKPIPAETVAKAMVKAALKESS 202

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	401
PLN00016	378	RNA-binding protein; Provisional	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.97
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.97
PRK05865	854	hypothetical protein; Provisional	99.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.96
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.96
PLN02778	298	3,5-epimerase/4-reductase	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
PLN02583	297	cinnamoyl-CoA reductase	99.94
PLN02996	491	fatty acyl-CoA reductase	99.93
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.92
PRK12320	699	hypothetical protein; Provisional	99.92
PLN02260	668	probable rhamnose biosynthetic enzyme	99.9
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.9
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.89
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.89
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.87
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.86
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.86
PLN02503	605	fatty acyl-CoA reductase 2	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.84
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.82
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.82
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.8
KOG2774	366	consensus NAD dependent epimerase [General functio	99.79
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.77
PRK06482	276	short chain dehydrogenase; Provisional	99.76
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.75
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.75
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.72
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK07074	257	short chain dehydrogenase; Provisional	99.71
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.71
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.71
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.71
PRK09135	249	pteridine reductase; Provisional	99.7
PRK05875	276	short chain dehydrogenase; Provisional	99.69
PRK12828	239	short chain dehydrogenase; Provisional	99.68
PRK08263	275	short chain dehydrogenase; Provisional	99.68
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.68
PRK07774	250	short chain dehydrogenase; Provisional	99.67
PRK07067	257	sorbitol dehydrogenase; Provisional	99.65
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK06194	287	hypothetical protein; Provisional	99.65
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.64
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.64
PRK06180	277	short chain dehydrogenase; Provisional	99.62
PRK07806	248	short chain dehydrogenase; Provisional	99.62
PRK12827	249	short chain dehydrogenase; Provisional	99.62
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK12829	264	short chain dehydrogenase; Provisional	99.62
PRK06914	280	short chain dehydrogenase; Provisional	99.62
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.61
PRK09186	256	flagellin modification protein A; Provisional	99.6
PRK07577	234	short chain dehydrogenase; Provisional	99.6
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.6
PRK06138	252	short chain dehydrogenase; Provisional	99.59
PRK06182	273	short chain dehydrogenase; Validated	99.59
PRK06128	300	oxidoreductase; Provisional	99.59
PRK07775	274	short chain dehydrogenase; Provisional	99.59
PRK06841	255	short chain dehydrogenase; Provisional	99.59
PRK12746	254	short chain dehydrogenase; Provisional	99.59
PRK07060	245	short chain dehydrogenase; Provisional	99.59
PRK07890	258	short chain dehydrogenase; Provisional	99.59
PRK05876	275	short chain dehydrogenase; Provisional	99.58
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK12939	250	short chain dehydrogenase; Provisional	99.57
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.57
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.57
PRK08219	227	short chain dehydrogenase; Provisional	99.57
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
PRK06701	290	short chain dehydrogenase; Provisional	99.56
PRK06123	248	short chain dehydrogenase; Provisional	99.56
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.55
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.55
PRK05717	255	oxidoreductase; Validated	99.55
PRK06500	249	short chain dehydrogenase; Provisional	99.54
PRK08324	681	short chain dehydrogenase; Validated	99.54
PRK06523	260	short chain dehydrogenase; Provisional	99.53
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.52
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.52
COG2910	211	Putative NADH-flavin reductase [General function p	99.52
PRK06398	258	aldose dehydrogenase; Validated	99.52
PRK05993	277	short chain dehydrogenase; Provisional	99.52
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.52
PRK10538	248	malonic semialdehyde reductase; Provisional	99.51
PRK07856	252	short chain dehydrogenase; Provisional	99.51
PRK06179	270	short chain dehydrogenase; Provisional	99.51
PLN02253	280	xanthoxin dehydrogenase	99.51
PRK12937	245	short chain dehydrogenase; Provisional	99.51
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.5
PRK07069	251	short chain dehydrogenase; Validated	99.5
PRK08017	256	oxidoreductase; Provisional	99.5
PRK06181	263	short chain dehydrogenase; Provisional	99.5
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.5
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.5
PRK08339	263	short chain dehydrogenase; Provisional	99.5
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.49
PRK08628	258	short chain dehydrogenase; Provisional	99.49
PRK06196	315	oxidoreductase; Provisional	99.49
PRK07985	294	oxidoreductase; Provisional	99.49
PRK06114	254	short chain dehydrogenase; Provisional	99.49
PRK06949	258	short chain dehydrogenase; Provisional	99.49
PRK09291	257	short chain dehydrogenase; Provisional	99.48
PRK08643	256	acetoin reductase; Validated	99.48
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.48
PRK09134	258	short chain dehydrogenase; Provisional	99.47
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.47
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.47
PRK08265	261	short chain dehydrogenase; Provisional	99.47
PRK09242	257	tropinone reductase; Provisional	99.47
PRK07478	254	short chain dehydrogenase; Provisional	99.46
PRK07814	263	short chain dehydrogenase; Provisional	99.46
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.46
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.46
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.46
PRK07063	260	short chain dehydrogenase; Provisional	99.46
PRK07041	230	short chain dehydrogenase; Provisional	99.45
PRK08264	238	short chain dehydrogenase; Validated	99.45
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.45
PRK07825	273	short chain dehydrogenase; Provisional	99.45
PRK06483	236	dihydromonapterin reductase; Provisional	99.45
PRK08226	263	short chain dehydrogenase; Provisional	99.45
PRK07326	237	short chain dehydrogenase; Provisional	99.44
PRK06057	255	short chain dehydrogenase; Provisional	99.44
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.44
PRK07454	241	short chain dehydrogenase; Provisional	99.44
PRK12743	256	oxidoreductase; Provisional	99.44
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.43
PRK12744	257	short chain dehydrogenase; Provisional	99.43
PRK06172	253	short chain dehydrogenase; Provisional	99.43
PRK05650	270	short chain dehydrogenase; Provisional	99.43
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.43
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.42
PRK05693	274	short chain dehydrogenase; Provisional	99.42
PRK12747	252	short chain dehydrogenase; Provisional	99.42
PRK08589	272	short chain dehydrogenase; Validated	99.42
PRK07677	252	short chain dehydrogenase; Provisional	99.42
PRK08267	260	short chain dehydrogenase; Provisional	99.42
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.41
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.41
PRK12742	237	oxidoreductase; Provisional	99.41
PRK06198	260	short chain dehydrogenase; Provisional	99.41
PRK07035	252	short chain dehydrogenase; Provisional	99.41
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PRK07109	334	short chain dehydrogenase; Provisional	99.41
PRK07102	243	short chain dehydrogenase; Provisional	99.4
PRK05867	253	short chain dehydrogenase; Provisional	99.4
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.4
PRK07024	257	short chain dehydrogenase; Provisional	99.39
PRK06197	306	short chain dehydrogenase; Provisional	99.39
PRK07062	265	short chain dehydrogenase; Provisional	99.39
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.38
PRK07831	262	short chain dehydrogenase; Provisional	99.38
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.37
PRK06101	240	short chain dehydrogenase; Provisional	99.37
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.37
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.36
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.35
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.35
PRK07576	264	short chain dehydrogenase; Provisional	99.34
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.34
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.34
PRK07904	253	short chain dehydrogenase; Provisional	99.34
PRK06924	251	short chain dehydrogenase; Provisional	99.33
PRK06484	520	short chain dehydrogenase; Validated	99.33
PRK07023	243	short chain dehydrogenase; Provisional	99.32
PRK08251	248	short chain dehydrogenase; Provisional	99.32
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.32
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.32
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.32
PRK05866	293	short chain dehydrogenase; Provisional	99.31
PRK06125	259	short chain dehydrogenase; Provisional	99.31
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.3
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.3
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.29
PRK05872	296	short chain dehydrogenase; Provisional	99.27
PRK07578	199	short chain dehydrogenase; Provisional	99.27
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.27
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.26
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.25
PRK06139	330	short chain dehydrogenase; Provisional	99.25
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.25
PRK06953	222	short chain dehydrogenase; Provisional	99.25
PRK09072	263	short chain dehydrogenase; Provisional	99.24
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.23
PRK08703	239	short chain dehydrogenase; Provisional	99.23
PRK08278	273	short chain dehydrogenase; Provisional	99.23
PRK06940	275	short chain dehydrogenase; Provisional	99.22
PRK05884	223	short chain dehydrogenase; Provisional	99.2
PRK07832	272	short chain dehydrogenase; Provisional	99.2
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.17
PRK05854	313	short chain dehydrogenase; Provisional	99.17
PRK07201	657	short chain dehydrogenase; Provisional	99.17
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.16
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.15
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.15
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.15
PRK08177	225	short chain dehydrogenase; Provisional	99.14
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.14
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.13
PRK05855	582	short chain dehydrogenase; Validated	99.13
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.13
PRK07791	286	short chain dehydrogenase; Provisional	99.13
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.11
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.11
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.11
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.1
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.08
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.08
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.08
PRK12367	245	short chain dehydrogenase; Provisional	99.07
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.04
PRK06484	520	short chain dehydrogenase; Validated	99.03
PLN02780	320	ketoreductase/ oxidoreductase	99.02
PRK05599	246	hypothetical protein; Provisional	99.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.92
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.91
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.89
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.86
PRK08303	305	short chain dehydrogenase; Provisional	98.83
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.83
KOG0725	270	consensus Reductases with broad range of substrate	98.83
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.81
PLN00015	308	protochlorophyllide reductase	98.8
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.76
PRK08862	227	short chain dehydrogenase; Provisional	98.74
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.65
KOG1208	314	consensus Dehydrogenases with different specificit	98.65
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.65
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.59
PRK08309	177	short chain dehydrogenase; Provisional	98.56
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.54
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.54
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.53
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.53
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.52
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.5
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.5
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.5
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.48
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.43
PRK09620	229	hypothetical protein; Provisional	98.29
PTZ00325	321	malate dehydrogenase; Provisional	98.26
COG1028	251	FabG Dehydrogenases with different specificities (	98.26
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.21
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.17
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.09
PLN00106	323	malate dehydrogenase	97.89
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.88
PRK06720	169	hypothetical protein; Provisional	97.87
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.73
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.66
PRK05086	312	malate dehydrogenase; Provisional	97.63
COG3268	382	Uncharacterized conserved protein [Function unknow	97.59
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.53
PRK14982	340	acyl-ACP reductase; Provisional	97.5
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.47
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.46
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.4
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.38
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	97.38
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.37
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.29
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.27
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.24
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.22
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.22
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.21
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.14
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.09
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.06
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.02
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.98
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.97
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.96
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	96.91
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.89
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.89
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.88
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.83
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.82
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.81
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.8
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.8
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.79
PRK08328	231	hypothetical protein; Provisional	96.75
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.74
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.68
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	96.67
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.66
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.64
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.61
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.6
PRK09496	453	trkA potassium transporter peripheral membrane com	96.58
PRK08223	287	hypothetical protein; Validated	96.57
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.57
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.54
PRK04148	134	hypothetical protein; Provisional	96.51
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.51
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.5
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.44
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.37
PLN02383	344	aspartate semialdehyde dehydrogenase	96.34
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.33
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.33
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.22
PRK09496	453	trkA potassium transporter peripheral membrane com	96.12
PLN02775	286	Probable dihydrodipicolinate reductase	96.11
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.08
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.07
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.05
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.05
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.03
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.97
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.87
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	95.87
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	95.85
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.85
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.84
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.84
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	95.82
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.8
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.78
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	95.74
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.74
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.71
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	95.7
PRK14851	679	hypothetical protein; Provisional	95.69
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	95.68
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.67
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.67
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.67
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.66
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.64
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.63
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.59
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.58
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.54
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.53
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	95.53
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.52
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.52
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.5
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	95.47
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.46
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.46
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	95.44
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.41
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.41
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.4
PRK07411	390	hypothetical protein; Validated	95.39
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.39
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.38
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.38
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.38
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.35
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	95.35
PRK07877	722	hypothetical protein; Provisional	95.33
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.31
PRK10669	558	putative cation:proton antiport protein; Provision	95.27
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.26
PRK06849	389	hypothetical protein; Provisional	95.26
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.23
PRK08655	437	prephenate dehydrogenase; Provisional	95.23
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.2
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.17
PRK14852	989	hypothetical protein; Provisional	95.16
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.16
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.13
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.11
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.1
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	95.1
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.1
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.09
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.05
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.04
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.04
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.03
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.03
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	94.98
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.98
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	94.9
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	94.88
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	94.88
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	94.87
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.78
PRK08462	445	biotin carboxylase; Validated	94.78
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	94.77
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.76
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.76
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.75
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.75
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.74
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	94.73
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.73
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.72
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	94.7
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.65
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.65
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.65
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.64
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.62
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	94.59
TIGR00036	266	dapB dihydrodipicolinate reductase.	94.57
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.57
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.57
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.56
PRK06223	307	malate dehydrogenase; Reviewed	94.55
PRK12815	1068	carB carbamoyl phosphate synthase large subunit; R	94.55
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	94.47
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	94.46
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.45
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	94.43
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	94.42
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.37
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	94.35
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.35
PRK08818	370	prephenate dehydrogenase; Provisional	94.35
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	94.29
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.28
PRK13303	265	L-aspartate dehydrogenase; Provisional	94.27
COG2130	340	Putative NADP-dependent oxidoreductases [General f	94.26
PTZ00117	319	malate dehydrogenase; Provisional	94.26
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.19
PRK13886	241	conjugal transfer protein TraL; Provisional	94.18
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	94.11
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.09
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.09
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.03
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.02
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.01
PLN02494	477	adenosylhomocysteinase	94.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	93.99
PRK15059	292	tartronate semialdehyde reductase; Provisional	93.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.95
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	93.94
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	93.92
PRK05442	326	malate dehydrogenase; Provisional	93.9
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	93.89
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	93.86
TIGR01369	1050	CPSaseII_lrg carbamoyl-phosphate synthase, large s	93.84
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	93.82
KOG0409	327	consensus Predicted dehydrogenase [General functio	93.8
PRK07417	279	arogenate dehydrogenase; Reviewed	93.79
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	93.77
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	93.75

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=1e-53  Score=418.87  Aligned_cols=335  Identities=68%  Similarity=1.131  Sum_probs=287.8

Q ss_pred             cccccccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHH
Q 015746           66 TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG  145 (401)
Q Consensus        66 ~~~~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~  145 (401)
                      .......++++|||||||||||||||++++++|+++||+|++++|+......+...+...+.++...+++++++|..++.
T Consensus        44 ~~~~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~  123 (378)
T PLN00016         44 AAAAAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVK  123 (378)
T ss_pred             hhhhcccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHH
Confidence            34445556789999999999999999999999999999999999988654444333333444554557999999988888


Q ss_pred             HhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCe
Q 015746          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~  225 (401)
                      .++...++|+|||+++.+..++.+++++|++.|+++|||+||.++|+.....++.|+++..+..+|..+|+++++.++++
T Consensus       124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~  203 (378)
T PLN00016        124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNW  203 (378)
T ss_pred             hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCe
Confidence            88765568999999999999999999999999999999999999999876677888887777668999999999999999


Q ss_pred             EEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHH
Q 015746          226 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       226 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~e  305 (401)
                      +++||+++||++....+..+++.++..++++.+++++.+.++|+|++|+|++++.+++++... +++||+++++.+++.|
T Consensus       204 ~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~-~~~yni~~~~~~s~~e  282 (378)
T PLN00016        204 TSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAA-GQIFNIVSDRAVTFDG  282 (378)
T ss_pred             EEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcccc-CCEEEecCCCccCHHH
Confidence            999999999998766666778888999999888999999999999999999999999986544 4899999999999999


Q ss_pred             HHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccCCh
Q 015746          306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF  385 (401)
Q Consensus       306 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~  385 (401)
                      +++.+.+.+|.+.++..+++........+..|+...++.+|++|++++|||+|.++++|+|+++++||+..++.+|+++|
T Consensus       283 l~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~~~~~~~  362 (378)
T PLN00016        283 MAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDRKEADF  362 (378)
T ss_pred             HHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCccccCc
Confidence            99999999999887766655544333334456666677789999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHhcCCCCCC
Q 015746          386 EIDDKILESLKVPIPV  401 (401)
Q Consensus       386 ~~~~~~~~~~~~~~~~  401 (401)
                      +.||+||++++.++.+
T Consensus       363 ~~~~~~~~~~~~~~~~  378 (378)
T PLN00016        363 ETDDKILEKLGVPVAA  378 (378)
T ss_pred             cccHHHHHHhcCCCCC
Confidence            9999999999998864

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.2e-42  Score=307.81  Aligned_cols=276  Identities=24%  Similarity=0.299  Sum_probs=226.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||.||||+|.+.+|++.||+|+++++-.......          +....++++.+|   .+.++++|+..
T Consensus         1 ~~iLVt----GGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~----------v~~~~~~f~~gDi~D~~~L~~vf~~~   66 (329)
T COG1087           1 MKVLVT----GGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIA----------LLKLQFKFYEGDLLDRALLTAVFEEN   66 (329)
T ss_pred             CeEEEe----cCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHH----------hhhccCceEEeccccHHHHHHHHHhc
Confidence            689999    9999999999999999999999999866544321          110115677776   67899999999


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHH
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~e  215 (401)
                      ++|+|||+||.                |+.++.+|+++|++.|+++|||.||+.|||.+...|+.|+.+..|. ++|+.+
T Consensus        67 ~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~-NPYG~s  145 (329)
T COG1087          67 KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPI-NPYGRS  145 (329)
T ss_pred             CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCC-CcchhH
Confidence            99999999992                8999999999999999999999999999999999999999988764 556655


Q ss_pred             HHHHH-----h----CCCeEEEecCeeecCCCCC----------CcHHHHHHHHHcCCC-cccCC------CCcceeeee
Q 015746          216 KYISE-----N----FSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRP-VPIPG------SGMQFTNIA  269 (401)
Q Consensus       216 k~~~e-----~----g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~v  269 (401)
                      |++.|     .    +++++++|..++.|....+          ..++..++.++...+ +.++|      ||...||||
T Consensus       146 Klm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYI  225 (329)
T COG1087         146 KLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYI  225 (329)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeee
Confidence            55544     2    8999999999999964332          144444444444444 56666      578899999


Q ss_pred             eHHHHHHHHHHHhcCCCcCCC-cEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechH
Q 015746          270 HVRDLSSMLTLAVENPEAASS-NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR  348 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~~~g-~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (401)
                      ||.|+|++++.+++.-...+. .+||++.|+..|..|+++.++++.|++.+....+.+ .+.         +..+++|++
T Consensus       226 HV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR-~GD---------pa~l~Ad~~  295 (329)
T COG1087         226 HVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRR-AGD---------PAILVADSS  295 (329)
T ss_pred             ehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCC-CCC---------CceeEeCHH
Confidence            999999999999986655322 599999999999999999999999999988655444 333         278899999


Q ss_pred             HHHHhcCCCCCC-CHHHHHHHHHHHHHH
Q 015746          349 AAKDILGWRSTT-NLPEDLKERFEEYVK  375 (401)
Q Consensus       349 k~~~~lG~~p~~-~l~e~l~~~~~~~~~  375 (401)
                      |++++|||+|++ ++++.++..+.|...
T Consensus       296 kA~~~Lgw~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         296 KARQILGWQPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             HHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence            999999999998 999999999999984

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-41  Score=305.03  Aligned_cols=282  Identities=17%  Similarity=0.206  Sum_probs=236.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~  148 (401)
                      |++|||    ||.||||+.+++.++++..  +|++++.-.=...      ...+..+. .++..++++|   .+.+.+++
T Consensus         1 ~~iLVT----GGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn------~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~   70 (340)
T COG1088           1 MKILVT----GGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGN------LENLADVEDSPRYRFVQGDICDRELVDRLF   70 (340)
T ss_pred             CcEEEe----cCcchHHHHHHHHHHhcCCCceEEEEecccccCC------HHHHHhhhcCCCceEEeccccCHHHHHHHH
Confidence            689999    9999999999999999854  4566654221000      00112222 2477788877   77888999


Q ss_pred             cCCcccEEEeCCC----------------CChhhHHHHHHHHHhCCCC-EEEEecccccccCCCC--CCCCCCCCCCCCC
Q 015746          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADE--PPHVEGDVVKPDA  209 (401)
Q Consensus       149 ~~~~~d~Vv~~a~----------------~~~~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~--~~~~E~~~~~~~~  209 (401)
                      ...++|+|+|+|+                .|+.||.+|++++++...+ ||+++|+..|||.-..  ..++|+++..|. 
T Consensus        71 ~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~Ps-  149 (340)
T COG1088          71 KEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPS-  149 (340)
T ss_pred             HhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCC-
Confidence            9888999999999                3899999999999999764 8999999999997543  368999999886 


Q ss_pred             ChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHH
Q 015746          210 GHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (401)
Q Consensus       210 ~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~  279 (401)
                      ++|.++|...+         +|++++|.|+++-|||.+.. .+++.++..++.|++++++|+|.+.|+|+||+|-++++.
T Consensus       150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~  229 (340)
T COG1088         150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAID  229 (340)
T ss_pred             CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHH
Confidence            88888875544         59999999999999998765 488888999999999999999999999999999999999


Q ss_pred             HHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-----EEecCCCcccccccccCCCccceEeechHHHHHhc
Q 015746          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-----IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL  354 (401)
Q Consensus       280 ~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  354 (401)
                      .++++...  |++||++++...+..|+++.|.+.+|++.+     +.++..+. +-         ..++.+|.+|++++|
T Consensus       230 ~Vl~kg~~--GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRp-GH---------D~RYaid~~Ki~~eL  297 (340)
T COG1088         230 LVLTKGKI--GETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRP-GH---------DRRYAIDASKIKREL  297 (340)
T ss_pred             HHHhcCcC--CceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCC-CC---------ccceeechHHHhhhc
Confidence            99999888  799999999999999999999999999877     55554432 22         277889999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          355 GWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       355 G~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      ||.|.++|+++|+++++||.++..+
T Consensus       298 gW~P~~~fe~GlrkTv~WY~~N~~W  322 (340)
T COG1088         298 GWRPQETFETGLRKTVDWYLDNEWW  322 (340)
T ss_pred             CCCcCCCHHHHHHHHHHHHHhchHH
Confidence            9999999999999999999988544

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.8e-40  Score=321.76  Aligned_cols=294  Identities=18%  Similarity=0.187  Sum_probs=220.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+||||++|+++|+++|++|++++|......................++.++.+|   .+.+..++
T Consensus        13 ~~~~~vlVt----GatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~   88 (348)
T PRK15181         13 LAPKRWLIT----GVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC   88 (348)
T ss_pred             ccCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            346899999    99999999999999999999999998654322100000000001111256777887   55677778


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      ++  +|+|||+|+.                |+.++.+++++|++.|+++|||+||.++||...+.+..|+.+..|. +.|
T Consensus        89 ~~--~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~-~~Y  165 (348)
T PRK15181         89 KN--VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPL-SPY  165 (348)
T ss_pred             hC--CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCC-Chh
Confidence            76  5999999983                6789999999999999999999999999997666667776655443 456


Q ss_pred             HHHHHHHH---------hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          213 QVEKYISE---------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       213 ~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      +..|...|         .+++++++||+++|||++..     .+++.++.+++.++++.++|+|.+.++|+|++|+|+++
T Consensus       166 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~  245 (348)
T PRK15181        166 AVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN  245 (348)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence            65554433         38999999999999997542     36778888888899999999999999999999999999


Q ss_pred             HHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCC
Q 015746          279 TLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  357 (401)
Q Consensus       279 ~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  357 (401)
                      +.++..... ..+++||+++++.++++|+++.+.+.++....... ..   ........+.....+.+|.+|++++|||.
T Consensus       246 ~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~d~~k~~~~lGw~  321 (348)
T PRK15181        246 LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS-RA---EPIYKDFRDGDVKHSQADITKIKTFLSYE  321 (348)
T ss_pred             HHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCccccccc-CC---CcccCCCCCCcccccccCHHHHHHHhCCC
Confidence            988765322 23589999999999999999999999974321000 00   00000001112245678999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHh
Q 015746          358 STTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~~  376 (401)
                      |+++++|+|+++++||+.+
T Consensus       322 P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        322 PEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             CCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999865

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.9e-38  Score=315.62  Aligned_cols=290  Identities=19%  Similarity=0.225  Sum_probs=213.8

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc----CCCC-C----CCccc---chhcCCCeEEE
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK----MKKP-P----FNRFN---EIVSAGGKTVW  138 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~----~~~~-~----~~~~~---~l~~~~~~~~~  138 (401)
                      ..++|+||||    ||+||||++|+++|+++|++|++++|.......    .... +    ...+.   .....+++++.
T Consensus        44 ~~~~k~VLVT----GatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~  119 (442)
T PLN02572         44 SSKKKKVMVI----GGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV  119 (442)
T ss_pred             cccCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence            3457899999    999999999999999999999998753321100    0000 0    00010   11123578888


Q ss_pred             cC---HhhHHHhhcCCcccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCC-EEEEecccccccCCC
Q 015746          139 GD---PAEVGNVVGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPAD  195 (401)
Q Consensus       139 ~D---~~~~~~~~~~~~~d~Vv~~a~~-------------------~~~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~  195 (401)
                      +|   .+.+.+++++.++|+|||+|+.                   |+.++.+++++|++.|++ +||++||..+||...
T Consensus       120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~  199 (442)
T PLN02572        120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN  199 (442)
T ss_pred             CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence            87   6778888887778999999952                   577899999999999986 899999999998643


Q ss_pred             CCCCCC-----------CC---CCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC------------
Q 015746          196 EPPHVE-----------GD---VVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK------------  240 (401)
Q Consensus       196 ~~~~~E-----------~~---~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~------------  240 (401)
                       .+++|           +.   +..| .+.|+..|+..|         +|++++++||+++|||+...            
T Consensus       200 -~~~~E~~i~~~~~~~e~~~~~~~~P-~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~  277 (442)
T PLN02572        200 -IDIEEGYITITHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLD  277 (442)
T ss_pred             -CCCcccccccccccccccccCCCCC-CCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccC
Confidence             22222           21   2222 245555554433         38999999999999997532            


Q ss_pred             ------CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCC-CcEEEecCCCCCCHHHHHHHHHHH
Q 015746          241 ------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS-SNIFNLVSDRAVTLDGMAKLCAQA  313 (401)
Q Consensus       241 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-g~~~~~~~~~~~t~~el~~~i~~~  313 (401)
                            ..+..++.++..++++.++|+|++.++|+||+|++++++.++++....+ ..+||+++ +.++++|+++.+.+.
T Consensus       278 ~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~  356 (442)
T PLN02572        278 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKA  356 (442)
T ss_pred             cccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHH
Confidence                  2455667778889888899999999999999999999999998753221 25899986 679999999999999


Q ss_pred             ---hCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC---CHHHHHHHHHHHHHHh
Q 015746          314 ---AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT---NLPEDLKERFEEYVKI  376 (401)
Q Consensus       314 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~---~l~e~l~~~~~~~~~~  376 (401)
                         +|.+..+...+.+....        ....+.+|.+|+++ |||+|++   ++++++.++++||++.
T Consensus       357 ~~~~g~~~~~~~~p~~~~~~--------~~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        357 GEKLGLDVEVISVPNPRVEA--------EEHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             HHhhCCCCCeeeCCCCcccc--------cccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence               88776665554332111        11355678999975 9999998   9999999999999855

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.1e-38  Score=311.94  Aligned_cols=277  Identities=19%  Similarity=0.229  Sum_probs=215.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcCHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..||||||    ||+||||++|+++|+++||+|++++|.......       .... ....+++++.+|.  ++..+.+ 
T Consensus       119 ~~mkILVT----GatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~-------~~~~~~~~~~~~~~~~Di--~~~~~~~-  184 (436)
T PLN02166        119 KRLRIVVT----GGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKE-------NLVHLFGNPRFELIRHDV--VEPILLE-  184 (436)
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCCCccHh-------HhhhhccCCceEEEECcc--ccccccC-
Confidence            34799999    999999999999999999999999986422110       0000 0113566776663  2223444 


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC-----CCCCC--
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPD--  208 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~-----~~~~~--  208 (401)
                       +|+|||+|+.                |+.++.+++++|++.++ +|||+||.+|||.....+.+|+.     +..+.  
T Consensus       185 -~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~  262 (436)
T PLN02166        185 -VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  262 (436)
T ss_pred             -CCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCc
Confidence             6999999972                57889999999999986 89999999999976666777764     22221  


Q ss_pred             --CChHHHHHHHHH----hCCCeEEEecCeeecCCCC---CCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHH
Q 015746          209 --AGHVQVEKYISE----NFSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (401)
Q Consensus       209 --~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~  279 (401)
                        .+|..+|+++.+    .+++++++||+++||++..   ..++..++.++.+++++.++|++++.++|+|++|+++++.
T Consensus       263 Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~  342 (436)
T PLN02166        263 YDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLV  342 (436)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHH
Confidence              234445555443    3899999999999999753   3467788899999999999999999999999999999999


Q ss_pred             HHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCC
Q 015746          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST  359 (401)
Q Consensus       280 ~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~  359 (401)
                      .++++..   +++||+++++.+|++|+++.+.+.+|.+.++...+.....          .....+|++|++++|||+|+
T Consensus       343 ~~~~~~~---~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~----------~~~~~~d~~Ka~~~LGw~P~  409 (436)
T PLN02166        343 ALMEGEH---VGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADD----------PHKRKPDISKAKELLNWEPK  409 (436)
T ss_pred             HHHhcCC---CceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCC----------ccccccCHHHHHHHcCCCCC
Confidence            9997643   3699999999999999999999999987766554432211          14567899999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhcC
Q 015746          360 TNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       360 ~~l~e~l~~~~~~~~~~~~  378 (401)
                      ++++++|+++++||++...
T Consensus       410 ~sl~egl~~~i~~~~~~~~  428 (436)
T PLN02166        410 ISLREGLPLMVSDFRNRIL  428 (436)
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            9999999999999987643

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.4e-37  Score=304.17  Aligned_cols=293  Identities=17%  Similarity=0.214  Sum_probs=213.2

Q ss_pred             ccccccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhH
Q 015746           69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (401)
Q Consensus        69 ~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~  144 (401)
                      ..+.+.|+||||    |||||||++++++|+++ |++|++++|..++...+.....    .....+++++.+|   .+.+
T Consensus         9 ~~~~~~~~VlVT----GgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~----~~~~~~~~~~~~Dl~d~~~l   80 (386)
T PLN02427          9 GKPIKPLTICMI----GAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDT----VPWSGRIQFHRINIKHDSRL   80 (386)
T ss_pred             CCcccCcEEEEE----CCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccc----ccCCCCeEEEEcCCCChHHH
Confidence            445566899999    99999999999999998 5999999987644322111100    0011367888887   5667


Q ss_pred             HHhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC---
Q 015746          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV---  205 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~---  205 (401)
                      .+++.+  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||..+||.....+..|+.+.   
T Consensus        81 ~~~~~~--~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~  157 (386)
T PLN02427         81 EGLIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQD  157 (386)
T ss_pred             HHHhhc--CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccc
Confidence            778876  4999999973                4667889999999888 79999999999986432222222211   


Q ss_pred             -----------------------CCCCChHHHHHHHHH----hCCCeEEEecCeeecCCCC------------CCcHHHH
Q 015746          206 -----------------------KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN------------KDCEEWF  246 (401)
Q Consensus       206 -----------------------~~~~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~~------------~~~~~~~  246 (401)
                                             .+..+|..+|+++.+    .+++++++||++||||+..            ..++..+
T Consensus       158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~  237 (386)
T PLN02427        158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF  237 (386)
T ss_pred             cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHH
Confidence                                   111344555555544    3899999999999999742            1244455


Q ss_pred             HHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC-CCCCHHHHHHHHHHHhCCCce-----E
Q 015746          247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVE-----I  320 (401)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~-~~~t~~el~~~i~~~~g~~~~-----~  320 (401)
                      +..+..++++.+++++++.++|+|++|+|++++.+++++...+|++||++++ +.++++|+++.+.+.+|....     .
T Consensus       238 ~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~  317 (386)
T PLN02427        238 SNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEE  317 (386)
T ss_pred             HHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccc
Confidence            6777888998889989999999999999999999998865333589999987 599999999999999985211     0


Q ss_pred             --EecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          321 --VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       321 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                        ...+.....    ............|.+|++++|||+|+++++++|+++++||++.
T Consensus       318 ~~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~  371 (386)
T PLN02427        318 PTVDVSSKEFY----GEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT  371 (386)
T ss_pred             cccccCccccc----CccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence              111111000    0000122556789999999999999999999999999999876

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2e-37  Score=275.10  Aligned_cols=279  Identities=20%  Similarity=0.188  Sum_probs=229.6

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +...++|+||    ||.||||+|||++|+.+||+|++++.--.......      -.+...+.++.+..|.  ...++..
T Consensus        24 p~~~lrI~it----GgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~------~~~~~~~~fel~~hdv--~~pl~~e   91 (350)
T KOG1429|consen   24 PSQNLRILIT----GGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENL------EHWIGHPNFELIRHDV--VEPLLKE   91 (350)
T ss_pred             CCCCcEEEEe----cCcchHHHHHHHHHHhcCCeEEEEecccccchhhc------chhccCcceeEEEeec--hhHHHHH
Confidence            3445899999    99999999999999999999999987553332211      1233345677777763  3446666


Q ss_pred             CcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCC----CCC
Q 015746          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAG  210 (401)
Q Consensus       151 ~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~----~~~  210 (401)
                      .  |.|+|+|+.                |..++.+++-.|++.+ +||++.||.+|||++...|..|+.+.+.    +++
T Consensus        92 v--D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~  168 (350)
T KOG1429|consen   92 V--DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRS  168 (350)
T ss_pred             h--hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchh
Confidence            5  999999883                7899999999999999 5899999999999998888888876432    123


Q ss_pred             hHHHHH-----HHHH----hCCCeEEEecCeeecCCC---CCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          211 HVQVEK-----YISE----NFSNWASFRPQYMIGSGN---NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       211 ~~~~ek-----~~~e----~g~~~~ilRp~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      -|..+|     ++..    .|+++.|.|+.+.|||.-   ++..+..|+.+.+++.++.++|+|.|.|+|.++.|+++.+
T Consensus       169 cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegl  248 (350)
T KOG1429|consen  169 CYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGL  248 (350)
T ss_pred             hhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHH
Confidence            344444     4333    389999999999999953   4568899999999999999999999999999999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCC
Q 015746          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS  358 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p  358 (401)
                      +++++.+..   .-+|+++++.+|+.|+++++.++.+-...+.+..+...+.          +...-|+.++++.|||.|
T Consensus       249 l~Lm~s~~~---~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp----------~kR~pDit~ake~LgW~P  315 (350)
T KOG1429|consen  249 LRLMESDYR---GPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDP----------RKRKPDITKAKEQLGWEP  315 (350)
T ss_pred             HHHhcCCCc---CCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCc----------cccCccHHHHHHHhCCCC
Confidence            999999887   4599999999999999999999998777777776655543          566789999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHhc
Q 015746          359 TTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       359 ~~~l~e~l~~~~~~~~~~~  377 (401)
                      +++|+|+|..++.|+++..
T Consensus       316 kv~L~egL~~t~~~fr~~i  334 (350)
T KOG1429|consen  316 KVSLREGLPLTVTYFRERI  334 (350)
T ss_pred             CCcHHHhhHHHHHHHHHHH
Confidence            9999999999999998763

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=8.2e-37  Score=303.15  Aligned_cols=277  Identities=19%  Similarity=0.238  Sum_probs=215.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ..||||||    |||||||++|+++|+++|++|++++|........      ....+...+++++.+|.  ++..+.+  
T Consensus       118 ~~~kILVT----GatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~------~~~~~~~~~~~~i~~D~--~~~~l~~--  183 (442)
T PLN02206        118 KGLRVVVT----GGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN------VMHHFSNPNFELIRHDV--VEPILLE--  183 (442)
T ss_pred             CCCEEEEE----CcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh------hhhhccCCceEEEECCc--cChhhcC--
Confidence            45899999    9999999999999999999999998754221110      00111223567777773  2334444  


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC-----CCC----
Q 015746          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-----VKP----  207 (401)
Q Consensus       153 ~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~-----~~~----  207 (401)
                      +|+|||+|+.                |+.++.+++++|++.|+ +|||+||..+|+.....+.+|+.+     ..+    
T Consensus       184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y  262 (442)
T PLN02206        184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY  262 (442)
T ss_pred             CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchH
Confidence            6999999972                57789999999999997 899999999999776667777642     111    


Q ss_pred             CCChHHHHHHHHH----hCCCeEEEecCeeecCCC---CCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHH
Q 015746          208 DAGHVQVEKYISE----NFSNWASFRPQYMIGSGN---NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (401)
Q Consensus       208 ~~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~  280 (401)
                      ..+|..+|+++.+    ++++++++||+++|||+.   ...++..++.+++.++++.+++++++.++|+|++|+|++++.
T Consensus       263 ~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~  342 (442)
T PLN02206        263 DEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR  342 (442)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHH
Confidence            1235555555543    389999999999999974   234667788888899999999999999999999999999999


Q ss_pred             HhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC
Q 015746          281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT  360 (401)
Q Consensus       281 ~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~  360 (401)
                      ++++..   +++||+++++.++++|+++.+++.+|.+..+...+....+          .....+|++|++++|||+|++
T Consensus       343 a~e~~~---~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~----------~~~~~~d~sKa~~~LGw~P~~  409 (442)
T PLN02206        343 LMEGEH---VGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDD----------PHKRKPDITKAKELLGWEPKV  409 (442)
T ss_pred             HHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCC----------ccccccCHHHHHHHcCCCCCC
Confidence            997653   3699999999999999999999999877766554432211          134568999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhc
Q 015746          361 NLPEDLKERFEEYVKIG  377 (401)
Q Consensus       361 ~l~e~l~~~~~~~~~~~  377 (401)
                      +++|+|+++++||++..
T Consensus       410 ~l~egl~~~~~~~~~~~  426 (442)
T PLN02206        410 SLRQGLPLMVKDFRQRV  426 (442)
T ss_pred             CHHHHHHHHHHHHHHhh
Confidence            99999999999998653

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=5.3e-37  Score=297.57  Aligned_cols=288  Identities=22%  Similarity=0.236  Sum_probs=213.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH----hhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~~~~~~  148 (401)
                      ||+||||    ||+||||++|+++|+++ ||+|++++|..+....+.          ...+++++.+|.    +.+.+++
T Consensus         1 m~~ilVt----GatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~~~~~~   66 (347)
T PRK11908          1 MKKVLIL----GVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----------NHPRMHFFEGDITINKEWIEYHV   66 (347)
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----------cCCCeEEEeCCCCCCHHHHHHHH
Confidence            5799999    99999999999999987 799999998664322111          113577777773    4456666


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC------C
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------K  206 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~------~  206 (401)
                      ++  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||..+||.....++.|+...      .
T Consensus        67 ~~--~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~  143 (347)
T PRK11908         67 KK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPIN  143 (347)
T ss_pred             cC--CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCC
Confidence            65  5999999873                4678999999999988 69999999999997655566665432      1


Q ss_pred             CCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCC---------CCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          207 PDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNN---------KDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       207 ~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                      .+.+.|+..|...|         .+++++++||+++|||+..         ..++..++.++..++++.+++++++.++|
T Consensus       144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~  223 (347)
T PRK11908        144 KPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAF  223 (347)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecc
Confidence            12245655554333         4889999999999999742         23566778888889998888889999999


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCC-CCCCHHHHHHHHHHHhCCCceEEecC--CCccccc---ccccCCCccc
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYD--PKAAGID---AKKAFPFRNM  341 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~-~~~t~~el~~~i~~~~g~~~~~~~~~--~~~~~~~---~~~~~~~~~~  341 (401)
                      +|++|++++++.+++++.. ..|++||++++ +.+|++|+++.|.+.+|....+...+  .......   ..........
T Consensus       224 i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (347)
T PRK11908        224 TDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQ  303 (347)
T ss_pred             ccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhc
Confidence            9999999999999988642 33589999997 58999999999999998644331100  0000000   0000001123


Q ss_pred             eEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          342 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       342 ~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      .+..|++|++++|||+|+++++|+++++++||+++..
T Consensus       304 ~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~  340 (347)
T PRK11908        304 NRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVA  340 (347)
T ss_pred             cccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            5556889999999999999999999999999987644

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.4e-36  Score=295.52  Aligned_cols=292  Identities=14%  Similarity=0.132  Sum_probs=215.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      |++||||    |||||||+++++.|+++|++|+++.+..........     +..+ ...+++++.+|   .+++.++++
T Consensus         1 ~~~vlVt----GatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   71 (355)
T PRK10217          1 MRKILIT----GGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMS-----LAPVAQSERFAFEKVDICDRAELARVFT   71 (355)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhh-----hhhcccCCceEEEECCCcChHHHHHHHh
Confidence            5799999    999999999999999999986655443222111100     0010 11246666776   677888888


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHh---------CCCCEEEEecccccccCCC--CCCCCCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKS---------SGVKQFLFISSAGIYKPAD--EPPHVEG  202 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~---------~gv~~~v~~SS~~vy~~~~--~~~~~E~  202 (401)
                      +.++|+|||+|+.                |+.++.+++++|++         .++++||++||.++|+...  ..+++|+
T Consensus        72 ~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~  151 (355)
T PRK10217         72 EHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET  151 (355)
T ss_pred             hcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC
Confidence            7668999999983                67889999999986         3567999999999998542  3457777


Q ss_pred             CCCCCCCChHHHHHHHH---------HhCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          203 DVVKPDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~---------e~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                      .+..+. +.|+..|...         +.+++++++||+++|||+... .++..++..+..++++.+++++++.++|+|++
T Consensus       152 ~~~~p~-s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  230 (355)
T PRK10217        152 TPYAPS-SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVE  230 (355)
T ss_pred             CCCCCC-ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence            665543 5565544332         348999999999999998743 36677778888888888899999999999999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccc--ccccccCCCccceEeechHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG--IDAKKAFPFRNMHFYAEPRAA  350 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~  350 (401)
                      |++++++.+++....  +++||+++++.++++|+++.+.+.+|........+.....  .......+.....+.+|++|+
T Consensus       231 D~a~a~~~~~~~~~~--~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  308 (355)
T PRK10217        231 DHARALYCVATTGKV--GETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKI  308 (355)
T ss_pred             HHHHHHHHHHhcCCC--CCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHH
Confidence            999999999987543  5899999999999999999999999853221111000000  000011122234567899999


Q ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          351 KDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       351 ~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      +++|||+|.++++|+|+++++||+.+.
T Consensus       309 ~~~lg~~p~~~l~e~l~~~~~~~~~~~  335 (355)
T PRK10217        309 ARELGWLPQETFESGMRKTVQWYLANE  335 (355)
T ss_pred             HHhcCCCCcCcHHHHHHHHHHHHHhCH
Confidence            999999999999999999999999874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=4.4e-36  Score=292.96  Aligned_cols=273  Identities=19%  Similarity=0.178  Sum_probs=212.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    |||||||+++++.|+++||+|++++|......  ...         ...++++.+|   .+.+..++.
T Consensus        20 ~~~~IlVt----GgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~--~~~---------~~~~~~~~~Dl~d~~~~~~~~~   84 (370)
T PLN02695         20 EKLRICIT----GAGGFIASHIARRLKAEGHYIIASDWKKNEHM--SED---------MFCHEFHLVDLRVMENCLKVTK   84 (370)
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHhCCCEEEEEEecccccc--ccc---------cccceEEECCCCCHHHHHHHHh
Confidence            46899999    99999999999999999999999998653211  000         0124566667   455666666


Q ss_pred             CCcccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCC----CCCCCCC--CCC
Q 015746          150 GVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE----PPHVEGD--VVK  206 (401)
Q Consensus       150 ~~~~d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~----~~~~E~~--~~~  206 (401)
                      +  +|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+....    .++.|++  +..
T Consensus        85 ~--~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~  162 (370)
T PLN02695         85 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE  162 (370)
T ss_pred             C--CCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCC
Confidence            5  5999999862                 4678899999999999999999999999986532    2466654  333


Q ss_pred             CCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHc-CCCcccCCCCcceeeeeeH
Q 015746          207 PDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       207 ~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v  271 (401)
                      | .+.|+..|...|         .+++++++||+++|||+...     .+...|+..+.+ +.++.+++++++.++|+|+
T Consensus       163 p-~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v  241 (370)
T PLN02695        163 P-QDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFI  241 (370)
T ss_pred             C-CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeH
Confidence            3 356665554443         48999999999999997532     245667777765 4778889999999999999


Q ss_pred             HHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHH
Q 015746          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK  351 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  351 (401)
                      +|++++++.+++...   +++||+++++.++++|+++.+.+..|.+.++...+.....           ....+|++|++
T Consensus       242 ~D~a~ai~~~~~~~~---~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~-----------~~~~~d~sk~~  307 (370)
T PLN02695        242 DECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGV-----------RGRNSDNTLIK  307 (370)
T ss_pred             HHHHHHHHHHHhccC---CCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCc-----------cccccCHHHHH
Confidence            999999999887643   3799999999999999999999999977666554432111           23457999999


Q ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          352 DILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       352 ~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      ++|||+|+++++++|+++++||+++.
T Consensus       308 ~~lgw~p~~~l~e~i~~~~~~~~~~~  333 (370)
T PLN02695        308 EKLGWAPTMRLKDGLRITYFWIKEQI  333 (370)
T ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.7e-36  Score=291.18  Aligned_cols=292  Identities=15%  Similarity=0.144  Sum_probs=215.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc--ccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      |+||||    ||+||||++++++|+++|++|++++|..+..  ..+.... .........+++++.+|   .+.+.++++
T Consensus         1 ~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALIT----GITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIY-EDPHNVNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEE----cCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhh-hccccccccceeEEEeccCCHHHHHHHHH
Confidence            589999    9999999999999999999999999876421  1110000 00000012357777777   677888888


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC---EEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK---QFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~---~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      +.++|+|||+|+.                |+.++.+++++|++.+++   +|||+||..+||.....++.|+.+..|. +
T Consensus        76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~-~  154 (343)
T TIGR01472        76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPR-S  154 (343)
T ss_pred             hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCC-C
Confidence            8778999999983                466899999999998864   8999999999997666678888776554 5


Q ss_pred             hHHHHHHHHH---------hCCCeEEEecCeeecCCCCCC----cHHHHHHHHHcCCC-cccCCCCcceeeeeeHHHHHH
Q 015746          211 HVQVEKYISE---------NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSS  276 (401)
Q Consensus       211 ~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~  276 (401)
                      .|+..|...|         ++++++..|+.++|||+....    .+..++.++..+++ ..++|++++.++|+|++|+|+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~  234 (343)
T TIGR01472       155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVE  234 (343)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHH
Confidence            5665554444         378889999999999964332    23344556666664 356688999999999999999


Q ss_pred             HHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEec-------CCC----cccccccccCCCccceEee
Q 015746          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-------DPK----AAGIDAKKAFPFRNMHFYA  345 (401)
Q Consensus       277 ~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~  345 (401)
                      +++.+++++.   +++||+++++++|++|+++.+.+.+|.+..+...       +..    ..........+.....+..
T Consensus       235 a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (343)
T TIGR01472       235 AMWLMLQQDK---PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLG  311 (343)
T ss_pred             HHHHHHhcCC---CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcC
Confidence            9999998754   2589999999999999999999999976432110       000    0000001112223355667


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVK  375 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~  375 (401)
                      |.+|++++|||+|+++++|+|++++++|++
T Consensus       312 d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       312 DATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             CHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            999999999999999999999999999984

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=8e-36  Score=311.32  Aligned_cols=292  Identities=18%  Similarity=0.237  Sum_probs=219.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHh---h-HH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA---E-VG  145 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~---~-~~  145 (401)
                      ...+|+||||    ||+||||++++++|+++ ||+|++++|........          +...+++++.+|..   . +.
T Consensus       312 ~~~~~~VLVT----GatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----------~~~~~~~~~~gDl~d~~~~l~  377 (660)
T PRK08125        312 AKRRTRVLIL----GVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----------LGHPRFHFVEGDISIHSEWIE  377 (660)
T ss_pred             hhcCCEEEEE----CCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----------cCCCceEEEeccccCcHHHHH
Confidence            4457899999    99999999999999986 79999999976432211          11136788888842   2 45


Q ss_pred             HhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC----
Q 015746          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----  205 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~----  205 (401)
                      +++++  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||..+||.....+++|+++.    
T Consensus       378 ~~l~~--~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~  454 (660)
T PRK08125        378 YHIKK--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVG  454 (660)
T ss_pred             HHhcC--CCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccC
Confidence            66765  5999999972                5788999999999998 79999999999997655677787643    


Q ss_pred             --CCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCC---------CCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          206 --KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNN---------KDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       206 --~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                        ..+.+.|+.+|...|         ++++++++||+++|||+..         ...+..++.++..++++.++|++.+.
T Consensus       455 p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~  534 (660)
T PRK08125        455 PINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK  534 (660)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee
Confidence              112234555554333         3899999999999999753         13566778888888888888999999


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC-CCCHHHHHHHHHHHhCCCceEEecCCCc-cc-ccc---cccCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVEIVHYDPKA-AG-IDA---KKAFPF  338 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~-~~t~~el~~~i~~~~g~~~~~~~~~~~~-~~-~~~---~~~~~~  338 (401)
                      ++|+|++|++++++.++++... ..|++||+++++ .++++|+++.+.+.+|.+.....++... .. ...   ......
T Consensus       535 rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  614 (660)
T PRK08125        535 RCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQ  614 (660)
T ss_pred             eceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccc
Confidence            9999999999999999987542 336899999985 7999999999999998643222222211 00 000   000011


Q ss_pred             ccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          339 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       339 ~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      ......+|++|++++|||+|+++++|+|+++++||++..+.
T Consensus       615 ~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~  655 (660)
T PRK08125        615 DVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_pred             cccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcccc
Confidence            22445679999999999999999999999999999987654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.4e-35  Score=284.06  Aligned_cols=286  Identities=15%  Similarity=0.161  Sum_probs=214.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc--cCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ++|+||||    ||+||||++++++|+++|++|++++|......  .+....  ........+++++.+|   .+.+.++
T Consensus         5 ~~~~vlVT----GatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~   78 (340)
T PLN02653          5 PRKVALIT----GITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIY--IDPHPNKARMKLHYGDLSDASSLRRW   78 (340)
T ss_pred             CCCEEEEE----CCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhc--cccccccCceEEEEecCCCHHHHHHH
Confidence            46899999    99999999999999999999999998764321  111000  0000011246677777   6677788


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC-----EEEEecccccccCCCCCCCCCCCCCC
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGDVVK  206 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~-----~~v~~SS~~vy~~~~~~~~~E~~~~~  206 (401)
                      +...++|+|||+|+.                |+.++.+++++|++.+++     +||++||..+||.... ++.|+.+..
T Consensus        79 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~  157 (340)
T PLN02653         79 LDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFH  157 (340)
T ss_pred             HHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCC
Confidence            887778999999983                567899999999998875     8999999999997654 778877766


Q ss_pred             CCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcH----HHHHHHHHcCCCccc-CCCCcceeeeeeHH
Q 015746          207 PDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPI-PGSGMQFTNIAHVR  272 (401)
Q Consensus       207 ~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~  272 (401)
                      |. +.|+..|...|         +++.++..|+.++|||+....++    ..++.++..+++..+ +|++++.++|+|++
T Consensus       158 p~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~  236 (340)
T PLN02653        158 PR-SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAG  236 (340)
T ss_pred             CC-ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHH
Confidence            53 55555554433         36777888999999996544333    333455666766554 48899999999999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCc--eEEecCCCcccccccccCCCccceEeechHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV--EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA  350 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  350 (401)
                      |+|++++.+++...   +++||++++++++++|+++.+.+.+|.+.  .+. +....       ..+.......+|++|+
T Consensus       237 D~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~-~~~~~-------~~~~~~~~~~~d~~k~  305 (340)
T PLN02653        237 DYVEAMWLMLQQEK---PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVE-IDPRY-------FRPAEVDNLKGDASKA  305 (340)
T ss_pred             HHHHHHHHHHhcCC---CCcEEecCCCceeHHHHHHHHHHHcCCCCCccee-eCccc-------CCccccccccCCHHHH
Confidence            99999999998753   36899999999999999999999998641  221 11110       0122224566899999


Q ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          351 KDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       351 ~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      +++|||+|+++++|+|+++++||++.-
T Consensus       306 ~~~lgw~p~~~l~~gi~~~~~~~~~~~  332 (340)
T PLN02653        306 REVLGWKPKVGFEQLVKMMVDEDLELA  332 (340)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999999998653

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=8.7e-35  Score=282.47  Aligned_cols=288  Identities=19%  Similarity=0.261  Sum_probs=214.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch---hcCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~D---~~~~~  145 (401)
                      +++++||||    |||||||++++++|+++|++|++++|..........    +....   ...+++++.+|   .+++.
T Consensus         3 ~~~~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~l~   74 (352)
T PLN02240          3 LMGRTILVT----GGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALR----RVKELAGDLGDNLVFHKVDLRDKEALE   74 (352)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHH----HHHHhhcccCccceEEecCcCCHHHHH
Confidence            345799999    999999999999999999999999875432210000    00000   11256677776   67777


Q ss_pred             HhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC-
Q 015746          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD-  208 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~-  208 (401)
                      .+++..++|+|||+++.                |+.++.+++++|++.++++||++||.++|+.....+++|+.+..+. 
T Consensus        75 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~  154 (352)
T PLN02240         75 KVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATN  154 (352)
T ss_pred             HHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCC
Confidence            77776678999999973                4677889999999999999999999999987666778888777654 


Q ss_pred             ---CChHHHHHHHHH-----hCCCeEEEecCeeecCCCC-------C---CcHHHHHHHHHcCC--CcccCC------CC
Q 015746          209 ---AGHVQVEKYISE-----NFSNWASFRPQYMIGSGNN-------K---DCEEWFFDRIVRKR--PVPIPG------SG  262 (401)
Q Consensus       209 ---~~~~~~ek~~~e-----~g~~~~ilRp~~v~G~~~~-------~---~~~~~~~~~~~~~~--~~~~~~------~~  262 (401)
                         .+|..+|+++.+     .+++++++|++++||++..       .   ..+..++..+..++  .+.++|      +|
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  234 (352)
T PLN02240        155 PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG  234 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence               234445555432     2577899999999997431       1   11223455555543  344554      67


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCC---CcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCc
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENP---EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR  339 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~---~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  339 (401)
                      .+.++|+|++|+|++++.+++..   ....+++||+++++++|++|+++.+.+.+|.+.++...+.....          
T Consensus       235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----------  304 (352)
T PLN02240        235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGD----------  304 (352)
T ss_pred             CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCCCC----------
Confidence            89999999999999999988653   12335899999999999999999999999987776555432211          


Q ss_pred             cceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          340 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       340 ~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      ...+..|++|++++|||+|+++++|+|+++++|+++++
T Consensus       305 ~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  342 (352)
T PLN02240        305 AEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP  342 (352)
T ss_pred             hhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence            13455789999999999999999999999999999875

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.4e-34  Score=280.82  Aligned_cols=293  Identities=18%  Similarity=0.155  Sum_probs=219.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|+||||    ||+||||++++++|+++|++|++++|+........       ..+. ...++++.+|   .+++.+++
T Consensus         3 ~~k~ilIt----GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~   71 (349)
T TIGR02622         3 QGKKVLVT----GHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLF-------ELLNLAKKIEDHFGDIRDAAKLRKAI   71 (349)
T ss_pred             CCCEEEEE----CCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHH-------HHHhhcCCceEEEccCCCHHHHHHHH
Confidence            46899999    99999999999999999999999998775432110       0010 1245566666   77888888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCC-CCEEEEecccccccCCC-CCCCCCCCCCCCC--
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPAD-EPPHVEGDVVKPD--  208 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~-~~~~~E~~~~~~~--  208 (401)
                      +..++|+|||+|+.                |+.++.+++++|++.+ +++||++||..+|+... ..++.|+.+..+.  
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~  151 (349)
T TIGR02622        72 AEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDP  151 (349)
T ss_pred             hhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCc
Confidence            88789999999983                5788999999999887 78999999999998643 2356666554432  


Q ss_pred             --CChHHHHHHHHHh-----------CCCeEEEecCeeecCCCC--CCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          209 --AGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNN--KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       209 --~~~~~~ek~~~e~-----------g~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                        .+|.++|.++..+           +++++++||+++|||++.  ..+++.++..+..++++.+ +++++.++|+|++|
T Consensus       152 Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D  230 (349)
T TIGR02622       152 YSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLE  230 (349)
T ss_pred             chhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHH
Confidence              3455555555432           789999999999999752  3467788888888888765 56889999999999


Q ss_pred             HHHHHHHHhcCCC---cCCCcEEEecCC--CCCCHHHHHHHHHHHhC-CCceEEecCCCcccccccccCCCccceEeech
Q 015746          274 LSSMLTLAVENPE---AASSNIFNLVSD--RAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP  347 (401)
Q Consensus       274 ~a~~~~~~~~~~~---~~~g~~~~~~~~--~~~t~~el~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (401)
                      ++++++.++++..   ...+++||++++  ++++..|+++.+.+.++ .+..+...+...        .+.......+|+
T Consensus       231 ~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~  302 (349)
T TIGR02622       231 PLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLN--------HPHEARLLKLDS  302 (349)
T ss_pred             HHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCC--------CCcccceeecCH
Confidence            9999998887531   111479999974  78999999999998775 334433211100        111124567899


Q ss_pred             HHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccCCh
Q 015746          348 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF  385 (401)
Q Consensus       348 ~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~  385 (401)
                      +|++++|||+|+++++++|+++++|+++.-+....+..
T Consensus       303 ~k~~~~lgw~p~~~l~~gi~~~i~w~~~~~~~~~~~~~  340 (349)
T TIGR02622       303 SKARTLLGWHPRWGLEEAVSRTVDWYKAWLRGEDMLQL  340 (349)
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCCChHHh
Confidence            99999999999999999999999999987555544443

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.2e-34  Score=279.95  Aligned_cols=283  Identities=21%  Similarity=0.277  Sum_probs=208.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+||||++++++|+++|++|++++|.........    ..+..+...++.++.+|   .+.+.+++...
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   72 (338)
T PRK10675          1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVL----PVIERLGGKHPTFVEGDIRNEALLTEILHDH   72 (338)
T ss_pred             CeEEEE----CCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHH----HHHHHhcCCCceEEEccCCCHHHHHHHHhcC
Confidence            689999    99999999999999999999999886543221100    00111112245556666   66777778765


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH--
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ--  213 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~--  213 (401)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+.....+++|+.+...+.+.|+  
T Consensus        73 ~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~s  152 (338)
T PRK10675         73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_pred             CCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHH
Confidence            68999999873                355788999999999999999999999999766667888876522234444  


Q ss_pred             ---HHHHHHHh-----CCCeEEEecCeeecCCCCC-----------CcHHHHHHHHHcCC--CcccCC------CCccee
Q 015746          214 ---VEKYISEN-----FSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIVRKR--PVPIPG------SGMQFT  266 (401)
Q Consensus       214 ---~ek~~~e~-----g~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~~~~--~~~~~~------~~~~~~  266 (401)
                         +|+++.++     +++++++|++++||+....           .+.. ++.++..++  ++.+++      ++.+++
T Consensus       153 K~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (338)
T PRK10675        153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPTEDGTGVR  231 (338)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHH-HHHHHHhcCCCceEEeCCcCCCCCCcEEE
Confidence               45555432     5788999999999974211           1222 344444432  234443      578899


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEee
Q 015746          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA  345 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (401)
                      +|+|++|+|++++.+++... ..++++||+++++.++++|+++.+.+.+|.+.++...+.....          .....+
T Consensus       232 ~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~  301 (338)
T PRK10675        232 DYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGD----------LPAYWA  301 (338)
T ss_pred             eeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCc----------hhhhhc
Confidence            99999999999999998632 2234899999999999999999999999988766554432211          134557


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      |++|+++.|||+|.++++++|+++++||.++
T Consensus       302 ~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        302 DASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             CHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999876

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=7.5e-35  Score=277.32  Aligned_cols=263  Identities=21%  Similarity=0.281  Sum_probs=202.7

Q ss_pred             EEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcccEEE
Q 015746           78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVL  157 (401)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d~Vv  157 (401)
                      |||    ||+||||++|++.|+++|++|+++.+...                      ....|.+++.++++..++|+||
T Consensus         1 lIt----Ga~GfiG~~l~~~L~~~g~~v~~~~~~~~----------------------~Dl~~~~~l~~~~~~~~~d~Vi   54 (306)
T PLN02725          1 FVA----GHRGLVGSAIVRKLEALGFTNLVLRTHKE----------------------LDLTRQADVEAFFAKEKPTYVI   54 (306)
T ss_pred             Ccc----cCCCcccHHHHHHHHhCCCcEEEeecccc----------------------CCCCCHHHHHHHHhccCCCEEE
Confidence            699    99999999999999999999876643220                      1112678899998888899999


Q ss_pred             eCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC----CCCCCCChHHHHH
Q 015746          158 DNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEK  216 (401)
Q Consensus       158 ~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~----~~~~~~~~~~~ek  216 (401)
                      |+|+.                 |+.++.+++++|++.++++|||+||..||+.....+++|++    +..|....|+..|
T Consensus        55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  134 (306)
T PLN02725         55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAK  134 (306)
T ss_pred             EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHH
Confidence            99862                 56689999999999999999999999999976667888876    3333222355444


Q ss_pred             HHH---------HhCCCeEEEecCeeecCCCC-----CCcHHHHHH----HHHcCCCccc-CCCCcceeeeeeHHHHHHH
Q 015746          217 YIS---------ENFSNWASFRPQYMIGSGNN-----KDCEEWFFD----RIVRKRPVPI-PGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       217 ~~~---------e~g~~~~ilRp~~v~G~~~~-----~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~v~v~D~a~~  277 (401)
                      ...         +.+++++++||+++||++..     ...+..++.    ....+.++.+ ++++.+.++|+|++|++++
T Consensus       135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~  214 (306)
T PLN02725        135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADA  214 (306)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHH
Confidence            333         24899999999999999753     123333333    3345666655 7889999999999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCC
Q 015746          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  357 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  357 (401)
                      ++.+++....  ++.||+++++.+++.|+++.+++.+|.+..+...+.....          .....+|++|++ .|||+
T Consensus       215 ~~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~~-~lg~~  281 (306)
T PLN02725        215 VVFLMRRYSG--AEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDG----------TPRKLMDSSKLR-SLGWD  281 (306)
T ss_pred             HHHHHhcccc--CcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCc----------ccccccCHHHHH-HhCCC
Confidence            9999987543  3678999999999999999999999987665433222111          134557999997 59999


Q ss_pred             CCCCHHHHHHHHHHHHHHhcCC
Q 015746          358 STTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      |+++++|+|+++++|++++...
T Consensus       282 p~~~~~~~l~~~~~~~~~~~~~  303 (306)
T PLN02725        282 PKFSLKDGLQETYKWYLENYET  303 (306)
T ss_pred             CCCCHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999987543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.9e-34  Score=275.49  Aligned_cols=282  Identities=16%  Similarity=0.209  Sum_probs=215.2

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhhc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +||||    ||||+||++++++|+++|  ++|++++|........      ....+ ...+++++.+|   ++++.++++
T Consensus         1 ~ilIt----GatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   70 (317)
T TIGR01181         1 RILVT----GGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLE------NLADLEDNPRYRFVKGDIGDRELVSRLFT   70 (317)
T ss_pred             CEEEE----cCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhh------hhhhhccCCCcEEEEcCCcCHHHHHHHHh
Confidence            59999    999999999999999987  7898887643211100      00111 11256777777   677888888


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC-EEEEecccccccCCCCC-CCCCCCCCCCC---
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEP-PHVEGDVVKPD---  208 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~~-~~~E~~~~~~~---  208 (401)
                      +.++|+|||+++.                |+.++.+++++|++.+.+ ++|++||.++|+..... ++.|..+..+.   
T Consensus        71 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y  150 (317)
T TIGR01181        71 EHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPY  150 (317)
T ss_pred             hcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCch
Confidence            7678999999983                566788999999987544 89999999999865432 57777665443   


Q ss_pred             -CChHHHHHHHH----HhCCCeEEEecCeeecCCCC-CCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHh
Q 015746          209 -AGHVQVEKYIS----ENFSNWASFRPQYMIGSGNN-KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (401)
Q Consensus       209 -~~~~~~ek~~~----e~g~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~  282 (401)
                       .+|..+|.++.    +.+++++++||+.+||+... ..+++.++..+..++++++++++++.++|+|++|+++++..++
T Consensus       151 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~  230 (317)
T TIGR01181       151 SASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVL  230 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHH
Confidence             23444555443    34899999999999999754 3467778888888888888899999999999999999999999


Q ss_pred             cCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCH
Q 015746          283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL  362 (401)
Q Consensus       283 ~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l  362 (401)
                      ++...  +++||+++++.++++|+++.+.+.+|.+..........         +.....+.+|++|++++|||+|++++
T Consensus       231 ~~~~~--~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~k~~~~lG~~p~~~~  299 (317)
T TIGR01181       231 EKGRV--GETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDR---------PGHDRRYAIDASKIKRELGWAPKYTF  299 (317)
T ss_pred             cCCCC--CceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCC---------ccchhhhcCCHHHHHHHhCCCCCCcH
Confidence            87543  58999999999999999999999999754332221111         11123446889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcC
Q 015746          363 PEDLKERFEEYVKIGR  378 (401)
Q Consensus       363 ~e~l~~~~~~~~~~~~  378 (401)
                      +++++++++||+++..
T Consensus       300 ~~~i~~~~~~~~~~~~  315 (317)
T TIGR01181       300 EEGLRKTVQWYLDNEW  315 (317)
T ss_pred             HHHHHHHHHHHHhccC
Confidence            9999999999987653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.9e-34  Score=280.10  Aligned_cols=289  Identities=15%  Similarity=0.175  Sum_probs=211.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~~  149 (401)
                      |+||||    ||+||||++++++|+++|++ |+++++...... ..     ....+. ...++++.+|   .+++.++++
T Consensus         1 mkilIT----GgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   70 (352)
T PRK10084          1 MKILVT----GGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-LE-----SLADVSDSERYVFEHADICDRAELDRIFA   70 (352)
T ss_pred             CeEEEE----CCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-HH-----HHHhcccCCceEEEEecCCCHHHHHHHHH
Confidence            589999    99999999999999999976 555554321110 00     000010 1235556666   677888887


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhC---------CCCEEEEecccccccCCC---------
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSS---------GVKQFLFISSAGIYKPAD---------  195 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~---------gv~~~v~~SS~~vy~~~~---------  195 (401)
                      ..++|+|||+|+.                |+.++.+++++|++.         ++++||++||..+|+...         
T Consensus        71 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (352)
T PRK10084         71 QHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE  150 (352)
T ss_pred             hcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence            6678999999983                678999999999874         467899999999998531         


Q ss_pred             -CCCCCCCCCCCCC----CChHHHHHHHHH----hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcce
Q 015746          196 -EPPHVEGDVVKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       196 -~~~~~E~~~~~~~----~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                       ..+++|+.+..|.    .+|..+|.++..    ++++++++|++.+|||+... .++..++..+..++++.+++++++.
T Consensus       151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (352)
T PRK10084        151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI  230 (352)
T ss_pred             cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeE
Confidence             1235676665543    234444444432    48999999999999998642 4566677788888888889999999


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEee
Q 015746          266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA  345 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (401)
                      ++|+|++|+++++..+++....  +++||+++++.++++|+++.+++.+|...+.. .+.. .........+.....+.+
T Consensus       231 ~~~v~v~D~a~a~~~~l~~~~~--~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-~~~~-~~~~~~~~~~~~~~~~~~  306 (352)
T PRK10084        231 RDWLYVEDHARALYKVVTEGKA--GETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-TSYR-EQITYVADRPGHDRRYAI  306 (352)
T ss_pred             EeeEEHHHHHHHHHHHHhcCCC--CceEEeCCCCcCcHHHHHHHHHHHhccccccc-cchh-hhccccccCCCCCceeee
Confidence            9999999999999999986443  58999999999999999999999998632210 0000 000001112223356778


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      |++|++++|||+|+++++++|+++++||+++.
T Consensus       307 d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  338 (352)
T PRK10084        307 DASKISRELGWKPQETFESGIRKTVEWYLANT  338 (352)
T ss_pred             CHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCH
Confidence            99999999999999999999999999999863

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.3e-34  Score=303.46  Aligned_cols=283  Identities=20%  Similarity=0.310  Sum_probs=217.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCC--cccCCCCCCCcccchhcCCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~  144 (401)
                      .++|+||||    |||||||++++++|+++  ||+|++++|....  ...+.       ......+++++.+|   .+.+
T Consensus         4 ~~~~~VLVT----GatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~-------~~~~~~~v~~~~~Dl~d~~~~   72 (668)
T PLN02260          4 YEPKNILIT----GAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLN-------PSKSSPNFKFVKGDIASADLV   72 (668)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhh-------hcccCCCeEEEECCCCChHHH
Confidence            457899999    99999999999999998  6899998875311  11100       00012367888888   4455


Q ss_pred             HHhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCC-CCEEEEecccccccCCCCCC---CCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPP---HVEGDV  204 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~---~~E~~~  204 (401)
                      ..++...++|+|||+|+.                |+.++.+++++|++.+ +++|||+||..+||.....+   ..|+.+
T Consensus        73 ~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~  152 (668)
T PLN02260         73 NYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQ  152 (668)
T ss_pred             HHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCC
Confidence            556654568999999984                4677899999999987 89999999999999764332   245544


Q ss_pred             CCCC----CChHHHHHHHHH----hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          205 VKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       205 ~~~~----~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                      ..|.    .+|..+|+++.+    ++++++++||++|||+++.. .+++.++..+..++++.++|++.+.++|+|++|+|
T Consensus       153 ~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva  232 (668)
T PLN02260        153 LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVA  232 (668)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHH
Confidence            4332    345556665544    38899999999999998643 36777788888889999999999999999999999


Q ss_pred             HHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce--EEecCCCcccccccccCCCccceEeechHHHHHh
Q 015746          276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE--IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI  353 (401)
Q Consensus       276 ~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  353 (401)
                      +++..+++....  +++||+++++.+++.|+++.+.+.+|.+..  +...+..          |+....+.+|++|++ +
T Consensus       233 ~a~~~~l~~~~~--~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~----------p~~~~~~~~d~~k~~-~  299 (668)
T PLN02260        233 EAFEVVLHKGEV--GHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENR----------PFNDQRYFLDDQKLK-K  299 (668)
T ss_pred             HHHHHHHhcCCC--CCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCC----------CCCcceeecCHHHHH-H
Confidence            999999976544  589999999999999999999999997643  2222211          222356678999997 5


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          354 LGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       354 lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      |||+|.++++|+|+++++||+++..
T Consensus       300 lGw~p~~~~~egl~~~i~w~~~~~~  324 (668)
T PLN02260        300 LGWQERTSWEEGLKKTMEWYTSNPD  324 (668)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhChh
Confidence            9999999999999999999997643

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=8.1e-35  Score=276.33  Aligned_cols=265  Identities=16%  Similarity=0.234  Sum_probs=205.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |+||||    ||+||||++++++|+++| +|++++|....                   +.....|.+.+.+++++.++|
T Consensus         1 m~iLVt----G~~GfiGs~l~~~L~~~g-~V~~~~~~~~~-------------------~~~Dl~d~~~~~~~~~~~~~D   56 (299)
T PRK09987          1 MNILLF----GKTGQVGWELQRALAPLG-NLIALDVHSTD-------------------YCGDFSNPEGVAETVRKIRPD   56 (299)
T ss_pred             CeEEEE----CCCCHHHHHHHHHhhccC-CEEEecccccc-------------------ccCCCCCHHHHHHHHHhcCCC
Confidence            689999    999999999999999999 79888875421                   111223688888999877789


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH-----
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ-----  213 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~-----  213 (401)
                      +|||+|+.                |+.++.+++++|++.|+ +|||+||..||+.....|++|+++..|. +.|+     
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~-~~Yg~sK~~  134 (299)
T PRK09987         57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPL-NVYGETKLA  134 (299)
T ss_pred             EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCC-CHHHHHHHH
Confidence            99999983                56789999999999997 7999999999988766789998887664 5555     


Q ss_pred             HHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCC--CcceeeeeeHHHHHHHHHHHhcCCCcCCCc
Q 015746          214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS--GMQFTNIAHVRDLSSMLTLAVENPEAASSN  291 (401)
Q Consensus       214 ~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~  291 (401)
                      +|+++..+..+++++|++++|||+.. .++..++..+..++++.++++  +.+.+.+.+++|+++++..++++...  ++
T Consensus       135 ~E~~~~~~~~~~~ilR~~~vyGp~~~-~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~--~g  211 (299)
T PRK09987        135 GEKALQEHCAKHLIFRTSWVYAGKGN-NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV--AG  211 (299)
T ss_pred             HHHHHHHhCCCEEEEecceecCCCCC-CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC--CC
Confidence            45555555778999999999999753 467777888888888888887  66666666778888888888766433  36


Q ss_pred             EEEecCCCCCCHHHHHHHHHHHh---CCCc---eEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHH
Q 015746          292 IFNLVSDRAVTLDGMAKLCAQAA---GLPV---EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED  365 (401)
Q Consensus       292 ~~~~~~~~~~t~~el~~~i~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~  365 (401)
                      +||+++++.+|+.|+++.+.+.+   |.+.   .+...+.....     ....++.+..+|++|+++.|||+|. +|+|+
T Consensus       212 iyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~-----~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~  285 (299)
T PRK09987        212 LYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYP-----TPARRPHNSRLNTEKFQQNFALVLP-DWQVG  285 (299)
T ss_pred             eEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcC-----CCCCCCCcccCCHHHHHHHhCCCCc-cHHHH
Confidence            99999999999999999998864   4333   23233211111     0122446778999999999999985 99999


Q ss_pred             HHHHHHHHH
Q 015746          366 LKERFEEYV  374 (401)
Q Consensus       366 l~~~~~~~~  374 (401)
                      |+++++.+.
T Consensus       286 l~~~~~~~~  294 (299)
T PRK09987        286 VKRMLTELF  294 (299)
T ss_pred             HHHHHHHHh
Confidence            999998663

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-34  Score=257.57  Aligned_cols=285  Identities=22%  Similarity=0.288  Sum_probs=222.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCC--cccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ++||||    ||.||||++.+..+...  .+..+.++.-.=.  ..-+++       -...++.+++.+|   ...+..+
T Consensus         7 ~~vlIt----gg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~-------~~n~p~ykfv~~di~~~~~~~~~   75 (331)
T KOG0747|consen    7 KNVLIT----GGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP-------VRNSPNYKFVEGDIADADLVLYL   75 (331)
T ss_pred             ceEEEe----cCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh-------hccCCCceEeeccccchHHHHhh
Confidence            799999    99999999999999987  3444444321100  111110       1123577888887   4555566


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCCEEEEecccccccCCCCCCCC-CCCCCCCCC
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV-EGDVVKPDA  209 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~~~~~~~~-E~~~~~~~~  209 (401)
                      +...++|.|+|+|+.                |+.++..++++++.. ++++|||+||..|||+..+.... |.+.++|. 
T Consensus        76 ~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPt-  154 (331)
T KOG0747|consen   76 FETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPT-  154 (331)
T ss_pred             hccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCC-
Confidence            666679999999983                789999999999999 58999999999999998776666 77777775 


Q ss_pred             ChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHH
Q 015746          210 GHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (401)
Q Consensus       210 ~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~  279 (401)
                      +.|++.|++.|         ++++++++|.++||||++.. ..++-|+.....+++.++.|+|.+.++|+|++|+++++.
T Consensus       155 npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~  234 (331)
T KOG0747|consen  155 NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFK  234 (331)
T ss_pred             CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHH
Confidence            77777776666         38999999999999998865 377788888889999999999999999999999999999


Q ss_pred             HHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCC
Q 015746          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST  359 (401)
Q Consensus       280 ~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~  359 (401)
                      .++++...  |+|||++.+...+..|+++.+.+.+.+...-.+.++..   ..-+..|....++.++.+|++ .|||+|.
T Consensus       235 ~v~~Kg~~--geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~---~~v~dRp~nd~Ry~~~~eKik-~LGw~~~  308 (331)
T KOG0747|consen  235 AVLEKGEL--GEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFI---FFVEDRPYNDLRYFLDDEKIK-KLGWRPT  308 (331)
T ss_pred             HHHhcCCc--cceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcc---eecCCCCcccccccccHHHHH-hcCCccc
Confidence            99999554  69999999999999999999999886632211111111   111122333366889999999 6999999


Q ss_pred             CCHHHHHHHHHHHHHHhc
Q 015746          360 TNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       360 ~~l~e~l~~~~~~~~~~~  377 (401)
                      ++|++||+.+++||.+.-
T Consensus       309 ~p~~eGLrktie~y~~~~  326 (331)
T KOG0747|consen  309 TPWEEGLRKTIEWYTKNF  326 (331)
T ss_pred             CcHHHHHHHHHHHHHhhh
Confidence            999999999999998763

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.8e-33  Score=270.63  Aligned_cols=290  Identities=16%  Similarity=0.135  Sum_probs=204.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++|+||||    ||+||||++++++|+++||+|++++|+.++....      .+..+.  ..+++++.+|   .+++.+
T Consensus         8 ~~~~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~   77 (342)
T PLN02214          8 PAGKTVCVT----GAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT------HLRELEGGKERLILCKADLQDYEALKA   77 (342)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH------HHHHhhCCCCcEEEEecCcCChHHHHH
Confidence            346899999    9999999999999999999999999976532110      000111  1246667777   677888


Q ss_pred             hhcCCcccEEEeCCCC-----------ChhhHHHHHHHHHhCCCCEEEEeccc-ccccCCCC---CCCCCCCCCC-----
Q 015746          147 VVGGVTFDVVLDNNGK-----------NLDAVRPVADWAKSSGVKQFLFISSA-GIYKPADE---PPHVEGDVVK-----  206 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~-----------~~~~~~~ll~aa~~~gv~~~v~~SS~-~vy~~~~~---~~~~E~~~~~-----  206 (401)
                      ++.++  |+|||+|+.           |+.++.+++++|++.++++|||+||. ++|+....   .+++|+++..     
T Consensus        78 ~~~~~--d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~  155 (342)
T PLN02214         78 AIDGC--DGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCK  155 (342)
T ss_pred             HHhcC--CEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcc
Confidence            88864  999999984           57889999999999999999999996 58875332   2467775311     


Q ss_pred             CCCChHH-----HHHHHHH----hCCCeEEEecCeeecCCCCCC---cHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          207 PDAGHVQ-----VEKYISE----NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       207 ~~~~~~~-----~ek~~~e----~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                      .+.+.|+     +|+++.+    ++++++++||++||||+....   ....++ .++.+... .++  ++.++|||++|+
T Consensus       156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~-~~~--~~~~~~i~V~Dv  231 (342)
T PLN02214        156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAK-TYA--NLTQAYVDVRDV  231 (342)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCcc-cCC--CCCcCeeEHHHH
Confidence            1123444     4444433    389999999999999976432   122223 34455443 333  356899999999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCC-CceEEecCCCcccccccccCCCccceEeechHHHHHh
Q 015746          275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI  353 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  353 (401)
                      |++++.+++++..  ++.||+++ ..++++|+++.+++.++. +.+.... ..         .+.......+|++|++ +
T Consensus       232 a~a~~~al~~~~~--~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~~~-~~---------~~~~~~~~~~d~~k~~-~  297 (342)
T PLN02214        232 ALAHVLVYEAPSA--SGRYLLAE-SARHRGEVVEILAKLFPEYPLPTKCK-DE---------KNPRAKPYKFTNQKIK-D  297 (342)
T ss_pred             HHHHHHHHhCccc--CCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCCCc-cc---------cCCCCCccccCcHHHH-H
Confidence            9999999998654  35899987 578999999999999863 1111100 00         0111234458899998 5


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHhcCCCccCChhhhHHHHH
Q 015746          354 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILE  393 (401)
Q Consensus       354 lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (401)
                      |||+| ++++|+|+++++||++.+.. .+-+....++-|+
T Consensus       298 LG~~p-~~lee~i~~~~~~~~~~~~~-~~~~~~~~~~~~~  335 (342)
T PLN02214        298 LGLEF-TSTKQSLYDTVKSLQEKGHL-APPPPSSSQESLE  335 (342)
T ss_pred             cCCcc-cCHHHHHHHHHHHHHHcCCC-CCCCCchhHHHHh
Confidence            99999 69999999999999998765 4445554444443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2.1e-33  Score=265.08  Aligned_cols=265  Identities=17%  Similarity=0.220  Sum_probs=205.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcccE
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV  155 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d~  155 (401)
                      +||||    |||||||++++++|+++||+|++++|...                   +    ..|.+++.+++++.++|+
T Consensus         1 kilv~----G~tG~iG~~l~~~l~~~g~~v~~~~r~~~-------------------d----~~~~~~~~~~~~~~~~d~   53 (287)
T TIGR01214         1 RILIT----GANGQLGRELVQQLSPEGRVVVALTSSQL-------------------D----LTDPEALERLLRAIRPDA   53 (287)
T ss_pred             CEEEE----cCCCHHHHHHHHHHHhcCCEEEEeCCccc-------------------C----CCCHHHHHHHHHhCCCCE
Confidence            58999    99999999999999999999999998621                   1    126888999998888999


Q ss_pred             EEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHHH
Q 015746          156 VLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVE  215 (401)
Q Consensus       156 Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~e  215 (401)
                      |||+++.                |+.++.+++++|++.+. +||++||.++|+.....+++|+++..+.    .+|..+|
T Consensus        54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E  132 (287)
T TIGR01214        54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGE  132 (287)
T ss_pred             EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHH
Confidence            9999983                35679999999999886 8999999999987666788888766553    2445566


Q ss_pred             HHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEe
Q 015746          216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (401)
Q Consensus       216 k~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~  295 (401)
                      +++...+.+++++||+++||++....+...++..+..++++.+.++  ++++++|++|+|+++..+++.+... +++||+
T Consensus       133 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~-~~~~ni  209 (287)
T TIGR01214       133 QAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARA-RGVYHL  209 (287)
T ss_pred             HHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCC-CCeEEE
Confidence            6666678999999999999998655566677777777777777664  5689999999999999999876333 489999


Q ss_pred             cCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccC-CCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHH
Q 015746          296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF-PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  372 (401)
Q Consensus       296 ~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~  372 (401)
                      ++++.+++.|+++.+.+.+|.+......+............ ........+|++|++++|||++ ++++++|.+++++
T Consensus       210 ~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~-~~~~~~l~~~~~~  286 (287)
T TIGR01214       210 ANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPL-PHWREALRAYLQE  286 (287)
T ss_pred             ECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCC-ccHHHHHHHHHhh
Confidence            99999999999999999999765422211000000000000 1112456789999999999954 6999999998763

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=2.2e-33  Score=267.71  Aligned_cols=268  Identities=17%  Similarity=0.211  Sum_probs=192.0

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hh-HHHhhcC--
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AE-VGNVVGG--  150 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~-~~~~~~~--  150 (401)
                      ||||    ||+||||++|+++|+++|++|+++.|........        ..+    .++...|.   ++ +..++.+  
T Consensus         2 ilVt----Ga~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~----~~~~~~d~~~~~~~~~~~~~~~~   65 (308)
T PRK11150          2 IIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNL----VDLDIADYMDKEDFLAQIMAGDD   65 (308)
T ss_pred             EEEe----cCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------Hhh----hhhhhhhhhhHHHHHHHHhcccc
Confidence            8999    9999999999999999999877776655322110        000    01112232   22 3334332  


Q ss_pred             -CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHH
Q 015746          151 -VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (401)
Q Consensus       151 -~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~e  215 (401)
                       .++|+|||+|+.              |+.++.+++++|++.++ +|||+||.++|+.....+..|..+..|. +.|+..
T Consensus        66 ~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~s  143 (308)
T PRK11150         66 FGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL-NVYGYS  143 (308)
T ss_pred             cCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC-CHHHHH
Confidence             257999999872              57789999999999998 6999999999997655566676655553 556654


Q ss_pred             HHH-----HH----hCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccC-CCCcceeeeeeHHHHHHHHHH
Q 015746          216 KYI-----SE----NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTL  280 (401)
Q Consensus       216 k~~-----~e----~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~~~~~  280 (401)
                      |+.     .+    .+++++++||+++||++....     ....+..++.++++..++ |+++..++|+|++|++++++.
T Consensus       144 K~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~  223 (308)
T PRK11150        144 KFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLW  223 (308)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHH
Confidence            444     33    378999999999999976432     233455677777765444 666778999999999999999


Q ss_pred             HhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCC-ceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCC
Q 015746          281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST  359 (401)
Q Consensus       281 ~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~  359 (401)
                      +++...   +++||+++++.+++.|+++.+.+.+|.. ......+....+        .......+|++|+++ +||+|+
T Consensus       224 ~~~~~~---~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~d~~k~~~-~g~~p~  291 (308)
T PRK11150        224 FWENGV---SGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKG--------RYQAFTQADLTKLRA-AGYDKP  291 (308)
T ss_pred             HHhcCC---CCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCcccccc--------ccceecccCHHHHHh-cCCCCC
Confidence            988643   3699999999999999999999999853 222222211100        011334679999986 799987


Q ss_pred             -CCHHHHHHHHHHHHH
Q 015746          360 -TNLPEDLKERFEEYV  374 (401)
Q Consensus       360 -~~l~e~l~~~~~~~~  374 (401)
                       ++++|+|+++++|+.
T Consensus       292 ~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        292 FKTVAEGVAEYMAWLN  307 (308)
T ss_pred             CCCHHHHHHHHHHHhh
Confidence             499999999999975

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.2e-33  Score=257.20  Aligned_cols=285  Identities=21%  Similarity=0.257  Sum_probs=225.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~~~  148 (401)
                      .++||||    ||.||||+|.+.+|+++||.|+++++-......    ...+...+..  .++.++.+|   .+.++++|
T Consensus         2 ~~~VLVt----GgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~----sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF   73 (343)
T KOG1371|consen    2 GKHVLVT----GGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLE----SLKRVRQLLGEGKSVFFVEGDLNDAEALEKLF   73 (343)
T ss_pred             CcEEEEe----cCCcceehHHHHHHHhCCCcEEEEecccccchh----HHHHHHHhcCCCCceEEEEeccCCHHHHHHHH
Confidence            4789999    999999999999999999999999865433211    0112233333  678888887   88899999


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      +..++|.|+|+|+.                |+.++.+++++|++.+++.+||.||+.+||.+...|++|+++...+.++|
T Consensus        74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~py  153 (343)
T KOG1371|consen   74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPY  153 (343)
T ss_pred             hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcc
Confidence            99999999999993                78999999999999999999999999999999999999999877333555


Q ss_pred             HH-----HHHHHHh----CCCeEEEecCeeecCCCCC-----------CcHHHHHHHHHc---------CCCcccCCCCc
Q 015746          213 QV-----EKYISEN----FSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIVR---------KRPVPIPGSGM  263 (401)
Q Consensus       213 ~~-----ek~~~e~----g~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~~---------~~~~~~~~~~~  263 (401)
                      +.     |+++...    +..++.||..+++|.+..+           +..+ .+.++..         |.+... .+|+
T Consensus       154 g~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t-~dgt  231 (343)
T KOG1371|consen  154 GKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTT-IDGT  231 (343)
T ss_pred             hhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccc-cCCC
Confidence            54     4444443    5678899999999932111           1221 2222222         333322 3568


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccce
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH  342 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (401)
                      ..++|+|+-|+|+.++.++++... ..-++||++.+...++.||+..++++.|.++++..++. +.+..         ..
T Consensus       232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~-R~gdv---------~~  301 (343)
T KOG1371|consen  232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPR-RNGDV---------AF  301 (343)
T ss_pred             eeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCC-CCCCc---------ee
Confidence            899999999999999999998775 22359999999999999999999999999999877766 43332         67


Q ss_pred             EeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       343 ~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      .+.+.++++++|||+|.+++++++++.+.|+..+..
T Consensus       302 ~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np~  337 (343)
T KOG1371|consen  302 VYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNPS  337 (343)
T ss_pred             eeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCCC
Confidence            889999999999999999999999999999997744

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.1e-32  Score=266.40  Aligned_cols=282  Identities=20%  Similarity=0.201  Sum_probs=198.1

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      +.++|+||||    ||+||||++++++|+++||+|+++.|+..........  ..+...  .+++++.+|   .+++.++
T Consensus         6 ~~~~~~vlIt----G~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~--~~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          6 PTGKKTACVI----GGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHL--RALQEL--GDLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCCCCeEEEE----CCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH--HhcCCC--CceEEEEcCCCChHHHHHH
Confidence            3457899999    9999999999999999999999999886432211000  000111  246777777   5667777


Q ss_pred             hcCCcccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCCEEEEecccccccCCC----CCCCCCCCC---
Q 015746          148 VGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPAD----EPPHVEGDV---  204 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~~~----~~~~~E~~~---  204 (401)
                      +.+  +|+|||+|+.               |+.++.+++++|++. ++++|||+||..+|+...    ..+++|+.+   
T Consensus        78 ~~~--~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~  155 (338)
T PLN00198         78 IAG--CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDV  155 (338)
T ss_pred             Hhc--CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCch
Confidence            876  5999999982               467788999999886 588999999999998532    234455421   


Q ss_pred             -----CCCCCChHHHHH-----HHHH----hCCCeEEEecCeeecCCCCCC---cHHHHHHHHHcCCCcccCC-CCcc--
Q 015746          205 -----VKPDAGHVQVEK-----YISE----NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPG-SGMQ--  264 (401)
Q Consensus       205 -----~~~~~~~~~~ek-----~~~e----~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~--  264 (401)
                           ..++.+.|+..|     ++.+    ++++++++||++||||+....   .+. ++..+..++++.+.| ++.+  
T Consensus       156 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~  234 (338)
T PLN00198        156 EFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQML  234 (338)
T ss_pred             hhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccc
Confidence                 112234455444     3333    389999999999999975432   222 334566677666655 3333  


Q ss_pred             --eeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCC-CceEEecCCCcccccccccCCCccc
Q 015746          265 --FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNM  341 (401)
Q Consensus       265 --~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~  341 (401)
                        .++|+|++|++++++.+++.+..  ++.|+ ++++.+++.|+++.+.+.++. +.+.... ..          + ...
T Consensus       235 ~~~~~~i~V~D~a~a~~~~~~~~~~--~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~-~~----------~-~~~  299 (338)
T PLN00198        235 SGSISITHVEDVCRAHIFLAEKESA--SGRYI-CCAANTSVPELAKFLIKRYPQYQVPTDFG-DF----------P-SKA  299 (338)
T ss_pred             cCCcceeEHHHHHHHHHHHhhCcCc--CCcEE-EecCCCCHHHHHHHHHHHCCCCCCCcccc-cc----------C-CCC
Confidence              37999999999999999988654  24675 445679999999999998863 2222111 10          0 013


Q ss_pred             eEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          342 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       342 ~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      ...+|.+|+++ +||+|+++++|+|+++++||++++..
T Consensus       300 ~~~~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~~~~  336 (338)
T PLN00198        300 KLIISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAKGLL  336 (338)
T ss_pred             ccccChHHHHh-CCceecCcHHHHHHHHHHHHHHcCCC
Confidence            45578999987 69999999999999999999987643

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=8.5e-33  Score=265.21  Aligned_cols=278  Identities=20%  Similarity=0.168  Sum_probs=197.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+||||++++++|+++||+|++++|+..........  ..+.. ...+++++.+|   ++.+..+++
T Consensus         3 ~~~~ilVt----GatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   75 (322)
T PLN02662          3 EGKVVCVT----GASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHL--LALDG-AKERLHLFKANLLEEGSFDSVVD   75 (322)
T ss_pred             CCCEEEEE----CChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHH--HhccC-CCCceEEEeccccCcchHHHHHc
Confidence            45899999    9999999999999999999999999976532211000  00000 01356778887   567888888


Q ss_pred             CCcccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCCEEEEecccc--cccCC---CCCCCCCCCCCCCC
Q 015746          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAG--IYKPA---DEPPHVEGDVVKPD  208 (401)
Q Consensus       150 ~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~--vy~~~---~~~~~~E~~~~~~~  208 (401)
                      +.  |+|||+|+.               |+.++.+++++|++. ++++|||+||.+  +|+..   ...+++|+.+..+.
T Consensus        76 ~~--d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~  153 (322)
T PLN02662         76 GC--EGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPA  153 (322)
T ss_pred             CC--CEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChh
Confidence            75  999999972               477899999999887 899999999986  46532   22356676554331


Q ss_pred             -----CChHH-----HHHHHH----HhCCCeEEEecCeeecCCCCC--CcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          209 -----AGHVQ-----VEKYIS----ENFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       209 -----~~~~~-----~ek~~~----e~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                           .+.|+     +|+++.    +.+++++++||+++|||+...  .....++..++.+.+.  +  +.+.++|+|++
T Consensus       154 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~  229 (322)
T PLN02662        154 FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVR  229 (322)
T ss_pred             HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHH
Confidence                 12344     444433    348999999999999997543  2333445556555442  2  23568999999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD  352 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  352 (401)
                      |+|++++.+++++..  ++.||++ ++.++++|+++.+.+.++...    .+.....   .  .+ ......+|++|+++
T Consensus       230 Dva~a~~~~~~~~~~--~~~~~~~-g~~~s~~e~~~~i~~~~~~~~----~~~~~~~---~--~~-~~~~~~~d~~k~~~  296 (322)
T PLN02662        230 DVANAHIQAFEIPSA--SGRYCLV-ERVVHYSEVVKILHELYPTLQ----LPEKCAD---D--KP-YVPTYQVSKEKAKS  296 (322)
T ss_pred             HHHHHHHHHhcCcCc--CCcEEEe-CCCCCHHHHHHHHHHHCCCCC----CCCCCCC---c--cc-cccccccChHHHHH
Confidence            999999999998654  2478887 567999999999999986421    1111000   0  00 11345689999985


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          353 ILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       353 ~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                       |||++ ++++++|+++++||++++.
T Consensus       297 -lg~~~-~~~~~~l~~~~~~~~~~~~  320 (322)
T PLN02662        297 -LGIEF-IPLEVSLKDTVESLKEKGF  320 (322)
T ss_pred             -hCCcc-ccHHHHHHHHHHHHHHcCC
Confidence             99997 6999999999999998875

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.4e-32  Score=259.67  Aligned_cols=274  Identities=27%  Similarity=0.369  Sum_probs=214.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+||||++|+++|+++||+|++++|...+.....            .++.++.+|   .+.........
T Consensus         1 ~~ILVt----G~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~   64 (314)
T COG0451           1 MRILVT----GGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAKGV   64 (314)
T ss_pred             CeEEEE----cCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHhcC
Confidence            459999    99999999999999999999999999886654321            255666666   34455555554


Q ss_pred             cccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCC-CCCCCCCC-CCCCCCCChH
Q 015746          152 TFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEG-DVVKPDAGHV  212 (401)
Q Consensus       152 ~~d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~-~~~~~~E~-~~~~~~~~~~  212 (401)
                      + |+|||+++.                 |+.++.+++++|++.++++|||.||.++|+.. ...+++|+ .+..|. +.|
T Consensus        65 ~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~-~~Y  142 (314)
T COG0451          65 P-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL-NPY  142 (314)
T ss_pred             C-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC-CHH
Confidence            3 999999883                 46789999999999999999999998877754 33367777 455444 256


Q ss_pred             HHHHHHHH-----h----CCCeEEEecCeeecCCCCCC----cHHHHHHHHHcCCC-cccCCCCcceeeeeeHHHHHHHH
Q 015746          213 QVEKYISE-----N----FSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       213 ~~ek~~~e-----~----g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      +..|+..|     +    +++++++||++||||+....    +...++.++..+.+ ..+.+++.+.++++|++|+++++
T Consensus       143 g~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  222 (314)
T COG0451         143 GVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADAL  222 (314)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHH
Confidence            65555444     3    59999999999999987664    45555666777776 66777888889999999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCC-CCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHHHHhcCC
Q 015746          279 TLAVENPEAASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW  356 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~-~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~  356 (401)
                      +.+++++..  + +||+++++ .++++|+++.+.+.+|.+.. +...+.        ...........+|..|+++.|||
T Consensus       223 ~~~~~~~~~--~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~lg~  291 (314)
T COG0451         223 LLALENPDG--G-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL--------GRRGDLREGKLLDISKARAALGW  291 (314)
T ss_pred             HHHHhCCCC--c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC--------CCCCcccccccCCHHHHHHHhCC
Confidence            999999887  3 99999997 89999999999999998866 333332        11122235667899999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHhc
Q 015746          357 RSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       357 ~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      .|.+++++++.++++|+....
T Consensus       292 ~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         292 EPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHhh
Confidence            999999999999999998764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1e-32  Score=263.54  Aligned_cols=271  Identities=19%  Similarity=0.255  Sum_probs=199.8

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC--
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG--  150 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~--  150 (401)
                      ||||    ||+||||++++++|+++|+ +|++++|..... .        +..+.   ...+.+|   .+.++.+...  
T Consensus         1 ilIt----GatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~--------~~~~~---~~~~~~d~~~~~~~~~~~~~~~   64 (314)
T TIGR02197         1 IIVT----GGAGFIGSNLVKALNERGITDILVVDNLRDGH-K--------FLNLA---DLVIADYIDKEDFLDRLEKGAF   64 (314)
T ss_pred             CEEe----CCcchhhHHHHHHHHHcCCceEEEEecCCCch-h--------hhhhh---heeeeccCcchhHHHHHHhhcc
Confidence            6999    9999999999999999998 788887755321 1        11111   1122233   4445554431  


Q ss_pred             CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH----
Q 015746          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV----  212 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~----  212 (401)
                      .++|+|||+|+.              |+.++.+++++|++.++ +|||+||.++|+... .++.|+++...+.+.|    
T Consensus        65 ~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~-~~~~e~~~~~~p~~~Y~~sK  142 (314)
T TIGR02197        65 GKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGE-AGFREGRELERPLNVYGYSK  142 (314)
T ss_pred             CCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCC-CCcccccCcCCCCCHHHHHH
Confidence            357999999983              57889999999999987 799999999999764 3566665432222444    


Q ss_pred             -HHHHHHHHh------CCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccC------CCCcceeeeeeHHHH
Q 015746          213 -QVEKYISEN------FSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIP------GSGMQFTNIAHVRDL  274 (401)
Q Consensus       213 -~~ek~~~e~------g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~v~D~  274 (401)
                       .+|+++.++      +++++++|++.+||++...     .++..++..+..++++.++      ++|++.++|+|++|+
T Consensus       143 ~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~  222 (314)
T TIGR02197       143 FLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDV  222 (314)
T ss_pred             HHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHH
Confidence             455556542      4689999999999997532     3455677778888777654      567788999999999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhc
Q 015746          275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL  354 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  354 (401)
                      +++++.++.. ..  +++||++++++++++|+++.+.+.+|.+.++...+.+....      ........+|.+|+++.|
T Consensus       223 a~~i~~~~~~-~~--~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~k~~~~l  293 (314)
T TIGR02197       223 VDVNLWLLEN-GV--SGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALR------GKYQYFTQADITKLRAAG  293 (314)
T ss_pred             HHHHHHHHhc-cc--CceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccc------cccccccccchHHHHHhc
Confidence            9999999988 32  47999999999999999999999999876544333221100      001123558999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHH
Q 015746          355 GWRSTTNLPEDLKERFEEYV  374 (401)
Q Consensus       355 G~~p~~~l~e~l~~~~~~~~  374 (401)
                      ||+|.++++|+++++++||+
T Consensus       294 ~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       294 YYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             CCCCcccHHHHHHHHHHHHh
Confidence            99999999999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.2e-32  Score=262.87  Aligned_cols=279  Identities=15%  Similarity=0.126  Sum_probs=199.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+||||++++++|+++||+|++++|+...........  .... ...+++++.+|   .+++.++++
T Consensus         4 ~~k~vlVt----G~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~~~~~~D~~d~~~~~~~~~   76 (325)
T PLN02989          4 GGKVVCVT----GASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLL--ALDG-AKERLKLFKADLLDEGSFELAID   76 (325)
T ss_pred             CCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHH--hccC-CCCceEEEeCCCCCchHHHHHHc
Confidence            36899999    99999999999999999999999988875432110000  0000 01256777777   667778887


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCCEEEEecccccccCC-----CCCCCCCCCCCCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPA-----DEPPHVEGDVVKP  207 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~~-----~~~~~~E~~~~~~  207 (401)
                      +  +|+|||+|+.                |+.++.+++++|.+. ++++||++||..+|+..     ...+++|+.+..|
T Consensus        77 ~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p  154 (325)
T PLN02989         77 G--CETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNP  154 (325)
T ss_pred             C--CCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCch
Confidence            6  5999999983                467789999999885 57899999998877543     2345677776543


Q ss_pred             C-----CChHH-----HHHHHHH----hCCCeEEEecCeeecCCCCC--CcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          208 D-----AGHVQ-----VEKYISE----NFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       208 ~-----~~~~~-----~ek~~~e----~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                      .     .+.|+     +|+++..    ++++++++||+++|||+...  .+...++..+..++...  +  .+.++|+|+
T Consensus       155 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v  230 (325)
T PLN02989        155 SFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDV  230 (325)
T ss_pred             hHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEH
Confidence            2     13354     4444432    48999999999999998654  24445566666665432  2  245799999


Q ss_pred             HHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHH
Q 015746          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK  351 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  351 (401)
                      +|+|++++.+++.+..  +++||++ ++.++++|+++.+.+.++.. .+   .......     .+.....+..|++|++
T Consensus       231 ~Dva~a~~~~l~~~~~--~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~~---~~~~~~~-----~~~~~~~~~~~~~k~~  298 (325)
T PLN02989        231 RDVALAHVKALETPSA--NGRYIID-GPVVTIKDIENVLREFFPDL-CI---ADRNEDI-----TELNSVTFNVCLDKVK  298 (325)
T ss_pred             HHHHHHHHHHhcCccc--CceEEEe-cCCCCHHHHHHHHHHHCCCC-CC---CCCCCCc-----ccccccCcCCCHHHHH
Confidence            9999999999988654  3589995 55899999999999999732 11   1111000     0111135568899988


Q ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          352 DILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       352 ~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      + |||.|.++++|+|+++++||++.+
T Consensus       299 ~-lg~~p~~~l~~gi~~~~~~~~~~~  323 (325)
T PLN02989        299 S-LGIIEFTPTETSLRDTVLSLKEKC  323 (325)
T ss_pred             H-cCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6 999999999999999999998764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.5e-32  Score=261.05  Aligned_cols=277  Identities=16%  Similarity=0.179  Sum_probs=196.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+||||++++++|+++||+|+++.|+..+...+....  .... ...+++++.+|   .+.+.++++
T Consensus         4 ~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   76 (322)
T PLN02986          4 GGKLVCVT----GASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLL--ALDG-AKERLKLFKADLLEESSFEQAIE   76 (322)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHH--hccC-CCCceEEEecCCCCcchHHHHHh
Confidence            35899999    99999999999999999999999999775432211000  0000 01356777787   667888888


Q ss_pred             CCcccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCCEEEEecccccc--cCC---CCCCCCCCCCCCC-
Q 015746          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVKP-  207 (401)
Q Consensus       150 ~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy--~~~---~~~~~~E~~~~~~-  207 (401)
                      +  +|+|||+|+.               |+.++.+++++|++. +++||||+||.++|  +..   .+.+++|+++..+ 
T Consensus        77 ~--~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~  154 (322)
T PLN02986         77 G--CDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPS  154 (322)
T ss_pred             C--CCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChH
Confidence            6  5999999973               467889999999986 78999999998864  332   1234667665432 


Q ss_pred             ----CCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC--CcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          208 ----DAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       208 ----~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          ..+.|+..|.+.|         ++++++++||+++|||....  .....++..+..+++.  ++  .+.++|+|++
T Consensus       155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~  230 (322)
T PLN02986        155 LCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVR  230 (322)
T ss_pred             HhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHH
Confidence                1244554443333         48999999999999997543  2233455666666653  33  4568999999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD  352 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  352 (401)
                      |+|++++.+++++..  +++||++ ++.++++|+++.+.+.++. ..+... .+..+.        ......+|.+|+++
T Consensus       231 Dva~a~~~al~~~~~--~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~~~-~~~~~~--------~~~~~~~d~~~~~~  297 (322)
T PLN02986        231 DVALAHIKALETPSA--NGRYIID-GPIMSVNDIIDILRELFPD-LCIADT-NEESEM--------NEMICKVCVEKVKN  297 (322)
T ss_pred             HHHHHHHHHhcCccc--CCcEEEe-cCCCCHHHHHHHHHHHCCC-CCCCCC-Cccccc--------cccCCccCHHHHHH
Confidence            999999999998755  3589995 5679999999999999873 221111 010000        01223478888865


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          353 ILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       353 ~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                       |||+|+ +++|+|+++++||++.+
T Consensus       298 -lg~~~~-~l~e~~~~~~~~~~~~~  320 (322)
T PLN02986        298 -LGVEFT-PMKSSLRDTILSLKEKC  320 (322)
T ss_pred             -cCCccc-CHHHHHHHHHHHHHHcC
Confidence             999996 99999999999999875

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=3e-32  Score=264.64  Aligned_cols=281  Identities=17%  Similarity=0.178  Sum_probs=192.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      .++||||    ||+||||++++++|+++|++|++++|+......+....  ..... ...++++.+|   .+.+.+++.+
T Consensus         5 ~k~iLVT----GatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~   77 (351)
T PLN02650          5 KETVCVT----GASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL--DLPGA-TTRLTLWKADLAVEGSFDDAIRG   77 (351)
T ss_pred             CCEEEEe----CCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH--hccCC-CCceEEEEecCCChhhHHHHHhC
Confidence            5789999    99999999999999999999999999765432211000  00000 0246677777   5677788876


Q ss_pred             CcccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CCEEEEecccccccCCC-CCC-CCCCCCC-------
Q 015746          151 VTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPAD-EPP-HVEGDVV-------  205 (401)
Q Consensus       151 ~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~-~~~-~~E~~~~-------  205 (401)
                        +|+|||+|+.               |+.++.+++++|++.+ +++|||+||.++|+... ..+ ++|+.+.       
T Consensus        78 --~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~  155 (351)
T PLN02650         78 --CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRR  155 (351)
T ss_pred             --CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhc
Confidence              4999999972               4678999999999987 78999999998776432 223 4555321       


Q ss_pred             -CCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcHHHHHHHH--HcCCCcccCCCCcceeeeeeHHH
Q 015746          206 -KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRI--VRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       206 -~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                       ..+.+.|+..|...|         ++++++++||+++|||+........++..+  ..++.. .++.. +.++|+|++|
T Consensus       156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~r~~v~V~D  233 (351)
T PLN02650        156 KKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYSII-KQGQFVHLDD  233 (351)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccCcC-CCcceeeHHH
Confidence             011234554443333         389999999999999976543223333322  223322 22222 3479999999


Q ss_pred             HHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCC-ceEEecCCCcccccccccCCCccceEeechHHHHH
Q 015746          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD  352 (401)
Q Consensus       274 ~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  352 (401)
                      +|++++.+++++..  +++| +++++.+++.|+++.+.+.++.. .+. ..+.          .+.......+|.+|++ 
T Consensus       234 va~a~~~~l~~~~~--~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~-~~~~----------~~~~~~~~~~d~~k~~-  298 (351)
T PLN02650        234 LCNAHIFLFEHPAA--EGRY-ICSSHDATIHDLAKMLREKYPEYNIPA-RFPG----------IDEDLKSVEFSSKKLT-  298 (351)
T ss_pred             HHHHHHHHhcCcCc--CceE-EecCCCcCHHHHHHHHHHhCcccCCCC-CCCC----------cCcccccccCChHHHH-
Confidence            99999999987654  2478 45567899999999999988621 111 1110          0111134456888875 


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHhcCCC
Q 015746          353 ILGWRSTTNLPEDLKERFEEYVKIGRDK  380 (401)
Q Consensus       353 ~lG~~p~~~l~e~l~~~~~~~~~~~~~~  380 (401)
                      +|||+|+++++|+|+++++||++.+..+
T Consensus       299 ~lG~~p~~~l~egl~~~i~~~~~~~~~~  326 (351)
T PLN02650        299 DLGFTFKYSLEDMFDGAIETCREKGLIP  326 (351)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999999887653

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=8e-32  Score=258.42  Aligned_cols=281  Identities=21%  Similarity=0.275  Sum_probs=207.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCCc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVT  152 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~~  152 (401)
                      +||||    ||+|+||++++++|+++|++|++++|..........    .....  .+++++.+|   .+++.+++...+
T Consensus         1 kvlV~----GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   70 (328)
T TIGR01179         1 KILVT----GGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALK----RGERI--TRVTFVEGDLRDRELLDRLFEEHK   70 (328)
T ss_pred             CEEEe----CCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhh----hhccc--cceEEEECCCCCHHHHHHHHHhCC
Confidence            58999    999999999999999999999988764432211000    00000  145566666   677888887667


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC----CChH
Q 015746          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHV  212 (401)
Q Consensus       153 ~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~  212 (401)
                      +|+|||+++.                |+.++.+++++|++.++++||++||.++|+.....+++|+.+..+.    .+|.
T Consensus        71 ~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~  150 (328)
T TIGR01179        71 IDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKL  150 (328)
T ss_pred             CcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHH
Confidence            8999999983                5778899999999999999999999999987766678888766543    2344


Q ss_pred             HHHHHHHH-----hCCCeEEEecCeeecCCCCC----------CcHHHHHHHHH-cCCCcccC------CCCcceeeeee
Q 015746          213 QVEKYISE-----NFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIV-RKRPVPIP------GSGMQFTNIAH  270 (401)
Q Consensus       213 ~~ek~~~e-----~g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~v~  270 (401)
                      .+|.++.+     .+++++++||+.+||+....          .++..++.... ...++.++      +++.+.++|||
T Consensus       151 ~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  230 (328)
T TIGR01179       151 MSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH  230 (328)
T ss_pred             HHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeee
Confidence            44544433     47899999999999985321          13333333333 23333333      35677899999


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHH
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA  349 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  349 (401)
                      ++|+++++..++..... ..+++||+++++.++++|+++.+++.+|.+.++...+.....          ......+++|
T Consensus       231 ~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~~~  300 (328)
T TIGR01179       231 VMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGD----------PASLVADASK  300 (328)
T ss_pred             HHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCcc----------ccchhcchHH
Confidence            99999999999976322 335899999999999999999999999998777554432211          1344578999


Q ss_pred             HHHhcCCCCCCC-HHHHHHHHHHHHHHh
Q 015746          350 AKDILGWRSTTN-LPEDLKERFEEYVKI  376 (401)
Q Consensus       350 ~~~~lG~~p~~~-l~e~l~~~~~~~~~~  376 (401)
                      ++++|||+|.++ ++++|+++++|+.++
T Consensus       301 ~~~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       301 IRRELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             HHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence            999999999887 999999999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.2e-32  Score=263.17  Aligned_cols=286  Identities=15%  Similarity=0.153  Sum_probs=195.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .+..|+||||    ||+||||++++++|+++|++|++++|+..+...+..    .+.  ...+++++.+|   .+.+.++
T Consensus         7 ~~~~~~vLVt----G~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~--~~~~~~~~~~Dl~~~~~~~~~   76 (353)
T PLN02896          7 ESATGTYCVT----GATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS----KWK--EGDRLRLFRADLQEEGSFDEA   76 (353)
T ss_pred             ccCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH----hhc--cCCeEEEEECCCCCHHHHHHH
Confidence            3457899999    999999999999999999999999987643321100    000  01356777777   5667777


Q ss_pred             hcCCcccEEEeCCCC------------------C-----hhhHHHHHHHHHhCC-CCEEEEecccccccCCC-----CCC
Q 015746          148 VGGVTFDVVLDNNGK------------------N-----LDAVRPVADWAKSSG-VKQFLFISSAGIYKPAD-----EPP  198 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~------------------~-----~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~-----~~~  198 (401)
                      +.+  +|+|||+|+.                  |     +.++.+++++|++.+ +++||++||.++|+...     ..+
T Consensus        77 ~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         77 VKG--CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             HcC--CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCc
Confidence            775  5999999983                  1     257889999998875 88999999999998532     134


Q ss_pred             CCCCCCC--------CCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcHHHHHHHHH---cCCCc--
Q 015746          199 HVEGDVV--------KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIV---RKRPV--  256 (401)
Q Consensus       199 ~~E~~~~--------~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~--  256 (401)
                      ++|+.+.        .+..+.|+..|++.|         ++++++++||++||||+.... ++.++..+.   .+...  
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~  233 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS-VPSSIQVLLSPITGDSKLF  233 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC-CCchHHHHHHHhcCCcccc
Confidence            5665221        112234554444433         389999999999999976532 222233332   33321  


Q ss_pred             ccCCCC---cceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCC-ceEEecCCCcccccc
Q 015746          257 PIPGSG---MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDA  332 (401)
Q Consensus       257 ~~~~~~---~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~  332 (401)
                      ...+..   ...++|+|++|+|++++.+++.+..  +.+|++ +++.++++|+++.+.+.++.. ..+.. .+....   
T Consensus       234 ~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~--~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~-~~~~~~---  306 (353)
T PLN02896        234 SILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA--EGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRL-DEEKRG---  306 (353)
T ss_pred             ccccccccccCceeEEeHHHHHHHHHHHHhCCCc--CccEEe-cCCCCCHHHHHHHHHHhCCCCCccccc-cccccC---
Confidence            222211   1246999999999999999987544  247865 567899999999999999732 22211 111111   


Q ss_pred             cccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccCC
Q 015746          333 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ  384 (401)
Q Consensus       333 ~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~  384 (401)
                            . ....+|.+++++ |||+|+++++++|+++++||++++..++..+
T Consensus       307 ------~-~~~~~~~~~~~~-lGw~p~~~l~~~i~~~~~~~~~~~~~~~~~~  350 (353)
T PLN02896        307 ------S-IPSEISSKKLRD-LGFEYKYGIEEIIDQTIDCCVDHGFLPQNRK  350 (353)
T ss_pred             ------c-cccccCHHHHHH-cCCCccCCHHHHHHHHHHHHHHCCCCCcccc
Confidence                  0 123467888875 9999999999999999999999987655544

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=9.8e-33  Score=259.88  Aligned_cols=261  Identities=22%  Similarity=0.321  Sum_probs=193.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      ||||||    ||+|+||++|++.|.++|++|+++.|..-                       ...|.+.+.+.+...+||
T Consensus         1 MriLI~----GasG~lG~~l~~~l~~~~~~v~~~~r~~~-----------------------dl~d~~~~~~~~~~~~pd   53 (286)
T PF04321_consen    1 MRILIT----GASGFLGSALARALKERGYEVIATSRSDL-----------------------DLTDPEAVAKLLEAFKPD   53 (286)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHTTTSEEEEEESTTCS------------------------TTSHHHHHHHHHHH--S
T ss_pred             CEEEEE----CCCCHHHHHHHHHHhhCCCEEEEeCchhc-----------------------CCCCHHHHHHHHHHhCCC
Confidence            799999    99999999999999999999999977631                       112788899999888899


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHH--
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK--  216 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek--  216 (401)
                      +|||+|+.                |+.++.+++++|++.|+ ++||+||..||+.....|+.|++++.|. +.|+..|  
T Consensus        54 ~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~-~~YG~~K~~  131 (286)
T PF04321_consen   54 VVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPL-NVYGRSKLE  131 (286)
T ss_dssp             EEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----S-SHHHHHHHH
T ss_pred             eEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCC-CHHHHHHHH
Confidence            99999983                67889999999999998 7999999999988777889999998876 6666544  


Q ss_pred             ---HHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc--CCCc
Q 015746          217 ---YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSN  291 (401)
Q Consensus       217 ---~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~g~  291 (401)
                         .+.+....+.|+|++++||+.. ..++.++++.+..++.+.++.+  +.+++++++|+|+++..++++...  ..++
T Consensus       132 ~E~~v~~~~~~~~IlR~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~d--~~~~p~~~~dlA~~i~~l~~~~~~~~~~~G  208 (286)
T PF04321_consen  132 GEQAVRAACPNALILRTSWVYGPSG-RNFLRWLLRRLRQGEPIKLFDD--QYRSPTYVDDLARVILELIEKNLSGASPWG  208 (286)
T ss_dssp             HHHHHHHH-SSEEEEEE-SEESSSS-SSHHHHHHHHHHCTSEEEEESS--CEE--EEHHHHHHHHHHHHHHHHH-GGG-E
T ss_pred             HHHHHHHhcCCEEEEecceecccCC-CchhhhHHHHHhcCCeeEeeCC--ceeCCEEHHHHHHHHHHHHHhcccccccce
Confidence               5555567999999999999943 4588888888888999888764  679999999999999999987754  2247


Q ss_pred             EEEecCCCCCCHHHHHHHHHHHhCCCc-eEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHH
Q 015746          292 IFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF  370 (401)
Q Consensus       292 ~~~~~~~~~~t~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~  370 (401)
                      +||+++++.+|+.|+++.+.+.+|.+. .+..++.......     ..++.+..++++|+++.||++++ +|+++|++++
T Consensus       209 iyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~-----~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~  282 (286)
T PF04321_consen  209 IYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRA-----APRPRNTSLDCRKLKNLLGIKPP-PWREGLEELV  282 (286)
T ss_dssp             EEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTS-----SGS-SBE-B--HHHHHCTTS----BHHHHHHHHH
T ss_pred             eEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCC-----CCCCCcccccHHHHHHccCCCCc-CHHHHHHHHH
Confidence            999999999999999999999999887 5555544433221     23457888999999999999995 8999999999


Q ss_pred             HHH
Q 015746          371 EEY  373 (401)
Q Consensus       371 ~~~  373 (401)
                      +.|
T Consensus       283 ~~~  285 (286)
T PF04321_consen  283 KQY  285 (286)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            876

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=3.7e-31  Score=245.10  Aligned_cols=281  Identities=19%  Similarity=0.221  Sum_probs=203.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+||||+||+++||++||.|+++.|++++..+...  ...++.. ..++..+.+|   ++.+.++++
T Consensus         5 ~~~~VcVT----GAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~--L~~l~~a-~~~l~l~~aDL~d~~sf~~ai~   77 (327)
T KOG1502|consen    5 EGKKVCVT----GASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEH--LRKLEGA-KERLKLFKADLLDEGSFDKAID   77 (327)
T ss_pred             CCcEEEEe----CCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHH--HHhcccC-cccceEEeccccccchHHHHHh
Confidence            56899999    999999999999999999999999999987432100  0011111 1246777777   889999999


Q ss_pred             CCcccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CCEEEEecccccccCC-----CCCCCCCCCCCCCC
Q 015746          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPA-----DEPPHVEGDVVKPD  208 (401)
Q Consensus       150 ~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~-----~~~~~~E~~~~~~~  208 (401)
                      ++  |.|||.|..               .+.|+.|++++|++.. ||||||+||..+-..+     ....++|+.+.++.
T Consensus        78 gc--dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~  155 (327)
T KOG1502|consen   78 GC--DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLD  155 (327)
T ss_pred             CC--CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHH
Confidence            97  999999983               4789999999999998 9999999998765422     34467788775543


Q ss_pred             -----CChHHHHHHH---------HHhCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          209 -----AGHVQVEKYI---------SENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       209 -----~~~~~~ek~~---------~e~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                           ..-|...|.+         .+.+++.+.+.|+.|+||.....  .-...+-.+++|..-.. .+  .+..||||+
T Consensus       156 ~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~-~n--~~~~~VdVr  232 (327)
T KOG1502|consen  156 FCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY-PN--FWLAFVDVR  232 (327)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC-CC--CceeeEeHH
Confidence                 1234444433         44589999999999999976552  22233445566643222 22  335599999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD  352 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  352 (401)
                      |+|.+++.+++++.+.  +.|.|.+.. .++.|+++++.+.+....    ++......     .........++++|+++
T Consensus       233 DVA~AHv~a~E~~~a~--GRyic~~~~-~~~~ei~~~l~~~~P~~~----ip~~~~~~-----~~~~~~~~~~~~~k~k~  300 (327)
T KOG1502|consen  233 DVALAHVLALEKPSAK--GRYICVGEV-VSIKEIADILRELFPDYP----IPKKNAEE-----HEGFLTSFKVSSEKLKS  300 (327)
T ss_pred             HHHHHHHHHHcCcccC--ceEEEecCc-ccHHHHHHHHHHhCCCCC----CCCCCCcc-----ccccccccccccHHHHh
Confidence            9999999999999994  588888655 669999999999996433    23322221     01112334578999998


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          353 ILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       353 ~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      +.||+. ++++|.+.++++++++.+.
T Consensus       301 lg~~~~-~~l~e~~~dt~~sl~~~~~  325 (327)
T KOG1502|consen  301 LGGFKF-RPLEETLSDTVESLREKGL  325 (327)
T ss_pred             ccccee-cChHHHHHHHHHHHHHhcC
Confidence            444666 6999999999999998764

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=5.9e-31  Score=252.73  Aligned_cols=280  Identities=21%  Similarity=0.234  Sum_probs=204.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+||||+++++.|+++||+|++++|+.+....+           ...+++++.+|   .+++.+++++.
T Consensus         1 ~~vlIt----G~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~l~~~~~~~   65 (328)
T TIGR03466         1 MKVLVT----GATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-----------EGLDVEIVEGDLRDPASLRKAVAGC   65 (328)
T ss_pred             CeEEEE----CCccchhHHHHHHHHHCCCEEEEEEecCcccccc-----------ccCCceEEEeeCCCHHHHHHHHhCC
Confidence            589999    9999999999999999999999999977543211           11256677776   66777888764


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccC-CCCCCCCCCCCCCCC--CChHH-
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD--AGHVQ-  213 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~-~~~~~~~E~~~~~~~--~~~~~-  213 (401)
                        |+|||+++.              |+.++.+++++|++.++++||++||..+|+. ....+++|+.+..+.  .+.|. 
T Consensus        66 --d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  143 (328)
T TIGR03466        66 --RALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKR  143 (328)
T ss_pred             --CEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHH
Confidence              999999863              5778899999999999999999999999985 344577777665442  23444 


Q ss_pred             ----HHHHHHH----hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcC
Q 015746          214 ----VEKYISE----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (401)
Q Consensus       214 ----~ek~~~e----~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~  284 (401)
                          +|+++.+    .+++++++||+++||++.... ....++.....++.. .+.+  ...+|+|++|+|++++.++++
T Consensus       144 sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~v~D~a~a~~~~~~~  220 (328)
T TIGR03466       144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMP-AYVD--TGLNLVHVDDVAEGHLLALER  220 (328)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCc-eeeC--CCcceEEHHHHHHHHHHHHhC
Confidence                5554444    388999999999999976432 222333444443322 2222  236899999999999999988


Q ss_pred             CCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccc---------cccccCCCc--------cceEeech
Q 015746          285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI---------DAKKAFPFR--------NMHFYAEP  347 (401)
Q Consensus       285 ~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~--------~~~~~~~~  347 (401)
                      ...  |+.|+++ ++.++++|+++.+.+.+|.+......+......         ......|..        .....+|+
T Consensus       221 ~~~--~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  297 (328)
T TIGR03466       221 GRI--GERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSS  297 (328)
T ss_pred             CCC--CceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCCh
Confidence            543  5788886 678999999999999999876554443221000         000011110        13566899


Q ss_pred             HHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          348 RAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       348 ~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      +|+++.|||+|. +++++|.++++||++++.
T Consensus       298 ~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~  327 (328)
T TIGR03466       298 AKAVRELGYRQR-PAREALRDAVEWFRANGY  327 (328)
T ss_pred             HHHHHHcCCCCc-CHHHHHHHHHHHHHHhCC
Confidence            999999999995 999999999999998753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=9.9e-32  Score=257.34  Aligned_cols=268  Identities=18%  Similarity=0.243  Sum_probs=201.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    |||||||++++++|+++||+|++++|+.++..           .+...+++++.+|   ++++.++++++
T Consensus         1 MkIlVt----GatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-----------~l~~~~v~~v~~Dl~d~~~l~~al~g~   65 (317)
T CHL00194          1 MSLLVI----GATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-----------FLKEWGAELVYGDLSLPETLPPSFKGV   65 (317)
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-----------hHhhcCCEEEECCCCCHHHHHHHHCCC
Confidence            689999    99999999999999999999999999864322           1122478888888   67788889885


Q ss_pred             cccEEEeCCCC-----------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 015746          152 TFDVVLDNNGK-----------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (401)
Q Consensus       152 ~~d~Vv~~a~~-----------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e  220 (401)
                        |+|||+++.           |+.++.+++++|+++|++||||+||.+++... ..+        ...+|..+|+++++
T Consensus        66 --d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~-~~~--------~~~~K~~~e~~l~~  134 (317)
T CHL00194         66 --TAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP-YIP--------LMKLKSDIEQKLKK  134 (317)
T ss_pred             --CEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC-CCh--------HHHHHHHHHHHHHH
Confidence              999998762           56788999999999999999999996543211 011        12368889999999


Q ss_pred             hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       221 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                      .+++++++||+.+|+..     +..+...++.+.+..+. ++.+.++|+|++|+|++++.+++++... |++||+++++.
T Consensus       135 ~~l~~tilRp~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~~-~~~~ni~g~~~  207 (317)
T CHL00194        135 SGIPYTIFRLAGFFQGL-----ISQYAIPILEKQPIWIT-NESTPISYIDTQDAAKFCLKSLSLPETK-NKTFPLVGPKS  207 (317)
T ss_pred             cCCCeEEEeecHHhhhh-----hhhhhhhhccCCceEec-CCCCccCccCHHHHHHHHHHHhcCcccc-CcEEEecCCCc
Confidence            99999999999888641     22222334445555444 3556789999999999999999876554 49999999999


Q ss_pred             CCHHHHHHHHHHHhCCCceEEecCCCcccccc--cc------cCCC--------cc-ceEeechHHHHHhcCCCCC--CC
Q 015746          301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA--KK------AFPF--------RN-MHFYAEPRAAKDILGWRST--TN  361 (401)
Q Consensus       301 ~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--~~------~~~~--------~~-~~~~~~~~k~~~~lG~~p~--~~  361 (401)
                      +|++|+++.+.+.+|++..+..+|........  ..      ..+.        .. .....+.+++++.||+.|.  ++
T Consensus       208 ~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~  287 (317)
T CHL00194        208 WNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELIS  287 (317)
T ss_pred             cCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhh
Confidence            99999999999999999888777654321111  00      0010        01 2333467788889999983  58


Q ss_pred             HHHHHHHHHHHHHH
Q 015746          362 LPEDLKERFEEYVK  375 (401)
Q Consensus       362 l~e~l~~~~~~~~~  375 (401)
                      +++++++.+...++
T Consensus       288 ~~~~~~~~~~~~~~  301 (317)
T CHL00194        288 LEDYFQEYFERILK  301 (317)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999988776654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.97  E-value=1.4e-30  Score=243.91  Aligned_cols=227  Identities=21%  Similarity=0.316  Sum_probs=174.5

Q ss_pred             EEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcC---HhhHHHhhcCC
Q 015746           78 LIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D---~~~~~~~~~~~  151 (401)
                      |||    ||+||||++|+++|+++|  ++|+++++.......         ..+...+. +++.+|   .+++.++++++
T Consensus         1 LVT----GgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~---------~~~~~~~~~~~~~~Di~d~~~l~~a~~g~   67 (280)
T PF01073_consen    1 LVT----GGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL---------KDLQKSGVKEYIQGDITDPESLEEALEGV   67 (280)
T ss_pred             CEE----cCCcHHHHHHHHHHHHCCCceEEEEcccccccccc---------hhhhcccceeEEEeccccHHHHHHHhcCC
Confidence            699    999999999999999999  799999987754321         01111122 367777   88999999997


Q ss_pred             cccEEEeCCCC---------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC-CCCC---CCCCCCCC-C---
Q 015746          152 TFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPH---VEGDVVKP-D---  208 (401)
Q Consensus       152 ~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~-~~~~---~E~~~~~~-~---  208 (401)
                        |+|||+|+.               |+.+++||+++|++.++++|||+||..++++.. ..++   +|..+... .   
T Consensus        68 --d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~  145 (280)
T PF01073_consen   68 --DVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDP  145 (280)
T ss_pred             --ceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCc
Confidence              999999883               789999999999999999999999999988621 2222   33333221 1   


Q ss_pred             --CChHHHHHHHHHh-C--------CCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          209 --AGHVQVEKYISEN-F--------SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       209 --~~~~~~ek~~~e~-g--------~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                        .+|..+|+++.+. +        +..++|||..||||++.. +.+.++..+..+......|++....+++|++|+|.+
T Consensus       146 Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~a  224 (280)
T PF01073_consen  146 YAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHA  224 (280)
T ss_pred             hHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHH
Confidence              3445555554443 2        678999999999998754 455556666667666778888889999999999999


Q ss_pred             HHHHhcC---C---CcCCCcEEEecCCCCCC-HHHHHHHHHHHhCCCceE
Q 015746          278 LTLAVEN---P---EAASSNIFNLVSDRAVT-LDGMAKLCAQAAGLPVEI  320 (401)
Q Consensus       278 ~~~~~~~---~---~~~~g~~~~~~~~~~~t-~~el~~~i~~~~g~~~~~  320 (401)
                      ++++++.   +   ...+|+.|+|++++++. +.|+...+.+.+|.+.+.
T Consensus       225 hvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  225 HVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             HHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            9988653   2   33468999999999999 999999999999998665

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=1.2e-29  Score=231.70  Aligned_cols=259  Identities=18%  Similarity=0.221  Sum_probs=212.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |+||||    |++|++|+.|++.|. .+++|++++|..-                   ++    .|++.+.+++...+||
T Consensus         1 M~iLi~----G~~GqLG~~L~~~l~-~~~~v~a~~~~~~-------------------Di----td~~~v~~~i~~~~PD   52 (281)
T COG1091           1 MKILIT----GANGQLGTELRRALP-GEFEVIATDRAEL-------------------DI----TDPDAVLEVIRETRPD   52 (281)
T ss_pred             CcEEEE----cCCChHHHHHHHHhC-CCceEEeccCccc-------------------cc----cChHHHHHHHHhhCCC
Confidence            459999    999999999999998 7799999988772                   11    2789999999999999


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHH
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~  214 (401)
                      +|||+|+.                |..+..|++++|++.|. ++||+||.+||......|+.|++.++|.    .+|+..
T Consensus        53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~G  131 (281)
T COG1091          53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAG  131 (281)
T ss_pred             EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHH
Confidence            99999993                78899999999999998 6999999999998887899999999886    344444


Q ss_pred             HHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEE
Q 015746          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  294 (401)
Q Consensus       215 ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~  294 (401)
                      |..+.+.+....|+|.+++||... .+++..+++....++++.+..  +|..+++++.|+|+++..++.....  +.+||
T Consensus       132 E~~v~~~~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~--~~~yH  206 (281)
T COG1091         132 EEAVRAAGPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKE--GGVYH  206 (281)
T ss_pred             HHHHHHhCCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhcccc--CcEEE
Confidence            445555678999999999999976 447777777788888887765  4888999999999999999999887  34999


Q ss_pred             ecCCCCCCHHHHHHHHHHHhCCCceEEe-cCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHH
Q 015746          295 LVSDRAVTLDGMAKLCAQAAGLPVEIVH-YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  373 (401)
Q Consensus       295 ~~~~~~~t~~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~  373 (401)
                      +++...+||.|+++.|.+.++.+..... ....+...     -.-++.+..+++.|+++.+|++++ .|+++++++++.+
T Consensus       207 ~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~-----~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~~  280 (281)
T COG1091         207 LVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPT-----PAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDEL  280 (281)
T ss_pred             EeCCCcccHHHHHHHHHHHhCCCccccccccccccCc-----cCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhhc
Confidence            9998889999999999999987664432 11111111     112346677999999999999885 8999999988753

>PRK05865 hypothetical protein; Provisional

Probab=99.97  E-value=1.3e-29  Score=264.58  Aligned_cols=246  Identities=20%  Similarity=0.234  Sum_probs=189.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+||||++++++|+++||+|++++|......              ..+++++.+|   .+++.+++++ 
T Consensus         1 MkILVT----GATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~--------------~~~v~~v~gDL~D~~~l~~al~~-   61 (854)
T PRK05865          1 MRIAVT----GASGVLGRGLTARLLSQGHEVVGIARHRPDSW--------------PSSADFIAADIRDATAVESAMTG-   61 (854)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCchhhc--------------ccCceEEEeeCCCHHHHHHHHhC-
Confidence            689999    99999999999999999999999998753210              0145666666   6778888876 


Q ss_pred             cccEEEeCCCC-------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCC
Q 015746          152 TFDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (401)
Q Consensus       152 ~~d~Vv~~a~~-------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~  224 (401)
                       +|+|||+|+.       |+.++.+++++|++.++++|||+||..                     |..+|+++.+++++
T Consensus        62 -vD~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------K~aaE~ll~~~gl~  119 (854)
T PRK05865         62 -ADVVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH---------------------QPRVEQMLADCGLE  119 (854)
T ss_pred             -CCEEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH---------------------HHHHHHHHHHcCCC
Confidence             5999999984       578899999999999999999999853                     77889999999999


Q ss_pred             eEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHH
Q 015746          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (401)
Q Consensus       225 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~  304 (401)
                      ++++||+++||++.     ..++..+.. .++...|++.+.++|+|++|+|++++.+++..... +++||+++++.+|++
T Consensus       120 ~vILRp~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~-ggvyNIgsg~~~Si~  192 (854)
T PRK05865        120 WVAVRCALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVID-SGPVNLAAPGELTFR  192 (854)
T ss_pred             EEEEEeceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcC-CCeEEEECCCcccHH
Confidence            99999999999963     223444432 23333455566789999999999999999765433 479999999999999


Q ss_pred             HHHHHHHHHhC---CCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          305 GMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       305 el~~~i~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      |+++.+.+...   .+......+...        .........+|++|+++.|||+|+++++++|+++++||+..
T Consensus       193 EIae~l~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        193 RIAAALGRPMVPIGSPVLRRVTSFAE--------LELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             HHHHHHhhhhccCCchhhhhccchhh--------hhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence            99999987542   111100000000        00111244689999999999999999999999999999875

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=1.1e-29  Score=218.59  Aligned_cols=268  Identities=18%  Similarity=0.195  Sum_probs=215.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      +++||||    ||+|.+|++|++.+.++|.  +-.++....+                      ...-+.++.+++|+..
T Consensus         1 s~kIlVt----Gg~GLVGsAi~~vv~~q~~~~e~wvf~~skd----------------------~DLt~~a~t~~lF~~e   54 (315)
T KOG1431|consen    1 SKKILVT----GGTGLVGSAIVKVVQEQGFDDENWVFIGSKD----------------------ADLTNLADTRALFESE   54 (315)
T ss_pred             CceEEEe----cCCchHHHHHHHHHHhcCCCCcceEEecccc----------------------ccccchHHHHHHHhcc
Confidence            5799999    9999999999999999986  3222222221                      1112678899999999


Q ss_pred             cccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC----CCCCCCC
Q 015746          152 TFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAG  210 (401)
Q Consensus       152 ~~d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~----~~~~~~~  210 (401)
                      +|..|||+|+.                 |+....|++..|-+.|++++|++.|.|+|.+....|++|..    ++.|..-
T Consensus        55 kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~  134 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNF  134 (315)
T ss_pred             CCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCch
Confidence            99999999882                 56677899999999999999999999999998888999876    3444334


Q ss_pred             hHHHHH---------HHHHhCCCeEEEecCeeecCCCCCC-----cHHHHHHHH----HcCC-CcccCCCCcceeeeeeH
Q 015746          211 HVQVEK---------YISENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRI----VRKR-PVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       211 ~~~~ek---------~~~e~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~----~~~~-~~~~~~~~~~~~~~v~v  271 (401)
                      -|...|         |..++|..++.+-|+++|||+++..     .++.++.++    ..|. ++.+||.|..+|.|+|+
T Consensus       135 gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys  214 (315)
T KOG1431|consen  135 GYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYS  214 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhH
Confidence            455555         4455699999999999999987654     566665554    2344 68999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcCCCcEEEecCCC--CCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHH
Q 015746          272 RDLSSMLTLAVENPEAASSNIFNLVSDR--AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA  349 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~~~g~~~~~~~~~--~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  349 (401)
                      +|+|+++++++.+-...  +-.+++.++  .+|.+|+++++.++++...+...-..+..+.          ....++++|
T Consensus       215 ~DLA~l~i~vlr~Y~~v--Epiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq----------~kKtasnsK  282 (315)
T KOG1431|consen  215 DDLADLFIWVLREYEGV--EPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQ----------FKKTASNSK  282 (315)
T ss_pred             hHHHHHHHHHHHhhcCc--cceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCC----------cccccchHH
Confidence            99999999999987663  467777776  8999999999999999998887766666554          345689999


Q ss_pred             HHHhcCCCCCCC-HHHHHHHHHHHHHHhcCCC
Q 015746          350 AKDILGWRSTTN-LPEDLKERFEEYVKIGRDK  380 (401)
Q Consensus       350 ~~~~lG~~p~~~-l~e~l~~~~~~~~~~~~~~  380 (401)
                      ++. |+|.++.+ |+++|.++++||.++..+.
T Consensus       283 L~s-l~pd~~ft~l~~ai~~t~~Wy~~Ny~qa  313 (315)
T KOG1431|consen  283 LRS-LLPDFKFTPLEQAISETVQWYLDNYEQA  313 (315)
T ss_pred             HHH-hCCCcccChHHHHHHHHHHHHHHhHHhh
Confidence            987 89999885 9999999999999886543

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=2.4e-29  Score=245.34  Aligned_cols=270  Identities=18%  Similarity=0.250  Sum_probs=186.9

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~  145 (401)
                      ..++|+||||    ||+||||++++++|+++||+|+++.|+.+....+....  .+.+.  ...+++++.+|   .+.+.
T Consensus        50 ~~~~k~VLVT----GatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~--~~~~~~~~~~~~~~v~~Dl~d~~~l~  123 (367)
T PLN02686         50 DAEARLVCVT----GGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREME--MFGEMGRSNDGIWTVMANLTEPESLH  123 (367)
T ss_pred             CCCCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--hhccccccCCceEEEEcCCCCHHHHH
Confidence            4567899999    99999999999999999999999888764322111000  00000  01246677777   66778


Q ss_pred             HhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCCEEEEeccc--ccccCC--CC--CCCCCC
Q 015746          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSA--GIYKPA--DE--PPHVEG  202 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~-gv~~~v~~SS~--~vy~~~--~~--~~~~E~  202 (401)
                      +++.++  |.|||+++.                |+.++.+++++|++. ++++|||+||.  .+|+..  ..  ..+.|+
T Consensus       124 ~~i~~~--d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~  201 (367)
T PLN02686        124 EAFDGC--AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEE  201 (367)
T ss_pred             HHHHhc--cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence            888875  999998762                467799999999986 79999999996  477642  12  235554


Q ss_pred             CCCC------C----CCChHHHHHHHHH----hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          203 DVVK------P----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       203 ~~~~------~----~~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                      .+..      +    ..+|..+|+++..    .|++++++||++||||+........ +..++.+. ..+++++.  ++|
T Consensus       202 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~-~~~~~~g~-~~~~g~g~--~~~  277 (367)
T PLN02686        202 SWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTA-TIAYLKGA-QEMLADGL--LAT  277 (367)
T ss_pred             CCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChh-HHHHhcCC-CccCCCCC--cCe
Confidence            3221      1    1234445554432    4899999999999999754322122 22444554 56677664  579


Q ss_pred             eeHHHHHHHHHHHhcCC-CcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeech
Q 015746          269 AHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP  347 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~-~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (401)
                      +||+|++++++.+++.. ....+++| +++++.++++|+++.+.+.+|.+......+....+         ....+.+|+
T Consensus       278 v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---------d~~~~~~d~  347 (367)
T PLN02686        278 ADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSSDD---------TPARFELSN  347 (367)
T ss_pred             EEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcC---------CcccccccH
Confidence            99999999999999853 11224688 77788999999999999999987665433322111         126678899


Q ss_pred             HHHHHhcCCCCCCCH
Q 015746          348 RAAKDILGWRSTTNL  362 (401)
Q Consensus       348 ~k~~~~lG~~p~~~l  362 (401)
                      +|++++|||.|+-..
T Consensus       348 ~kl~~~l~~~~~~~~  362 (367)
T PLN02686        348 KKLSRLMSRTRRCCY  362 (367)
T ss_pred             HHHHHHHHHhhhccc
Confidence            999999999986443

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=5.3e-28  Score=215.42  Aligned_cols=295  Identities=18%  Similarity=0.160  Sum_probs=228.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+.|||    |-||+-|.+|++.|+++||+|+++.|.......-+- ..........+.+++..+|   ...+.++++
T Consensus         1 ~~K~ALIT----GITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~   75 (345)
T COG1089           1 MGKVALIT----GITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILE   75 (345)
T ss_pred             CCceEEEe----cccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHH
Confidence            36789999    999999999999999999999999998644332111 1122334444567788887   677888889


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC--CEEEEecccccccCCCCCCCCCCCCCCCCCCh
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv--~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~  211 (401)
                      ..+||-|+|++++                +-.++.+++++.+..|.  -||...||...||...+.|..|+.|..|. ++
T Consensus        76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr-SP  154 (345)
T COG1089          76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SP  154 (345)
T ss_pred             hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC-CH
Confidence            9999999999994                46789999999999875  38999999999999999999999999886 99


Q ss_pred             HHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcHHHHH----HHHHcCCC-cccCCCCcceeeeeeHHHHHHH
Q 015746          212 VQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFF----DRIVRKRP-VPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       212 ~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      |++.|+-.-         +|+-.+.=++.+--+|.....++..-+    .++..|.. -...|+-+..|||-|..|.+++
T Consensus       155 YAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~  234 (345)
T COG1089         155 YAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEA  234 (345)
T ss_pred             HHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHH
Confidence            999995543         466555555555556666655555533    33444433 3456888999999999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccc-----------ccccccCCCccceEeec
Q 015746          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----------IDAKKAFPFRNMHFYAE  346 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  346 (401)
                      ++.+++.+..   ..|+++.++..|++|++++-.+..|.+.++..-...+.+           .+.+...|....-...|
T Consensus       235 mwlmLQq~~P---ddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgd  311 (345)
T COG1089         235 MWLMLQQEEP---DDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGD  311 (345)
T ss_pred             HHHHHccCCC---CceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCC
Confidence            9999999885   789999999999999999999999987765321111111           12233445555677789


Q ss_pred             hHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          347 PRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       347 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      +.|+++.|||+|+++++|.+++++++..+.
T Consensus       312 p~KA~~~LGW~~~~~~~elv~~Mv~~dl~~  341 (345)
T COG1089         312 PTKAKEKLGWRPEVSLEELVREMVEADLEA  341 (345)
T ss_pred             HHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999987764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.96  E-value=4.4e-29  Score=228.38  Aligned_cols=204  Identities=29%  Similarity=0.469  Sum_probs=172.4

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCCcc
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~~~  153 (401)
                      ||||    |||||||++++++|+++|++|+.+.|+.......          ....+++++.+|   .+.+.++++..++
T Consensus         1 IlI~----GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~~~dl~~~~~~~~~~~~~~~   66 (236)
T PF01370_consen    1 ILIT----GATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----------EKKLNVEFVIGDLTDKEQLEKLLEKANI   66 (236)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----------HHHTTEEEEESETTSHHHHHHHHHHHTE
T ss_pred             EEEE----ccCCHHHHHHHHHHHHcCCccccccccccccccc----------cccceEEEEEeeccccccccccccccCc
Confidence            7999    9999999999999999999999999888544210          001156666666   7888899988889


Q ss_pred             cEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHH
Q 015746          154 DVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (401)
Q Consensus       154 d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~  217 (401)
                      |+|||+|+.                |+.++.+++++|++.++++||++||..+|+.....+++|+.+..+. +.|+..|.
T Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~-~~Y~~~K~  145 (236)
T PF01370_consen   67 DVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPL-SPYGASKR  145 (236)
T ss_dssp             SEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHS-SHHHHHHH
T ss_pred             eEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence            999999984                5788999999999999999999999999999877788999888443 66666554


Q ss_pred             HHH---------hCCCeEEEecCeeecCC----CCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcC
Q 015746          218 ISE---------NFSNWASFRPQYMIGSG----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (401)
Q Consensus       218 ~~e---------~g~~~~ilRp~~v~G~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~  284 (401)
                      ..|         .+++++++||+.+||+.    ....++..++.++.+++++.++++++++++++|++|+|++++.++++
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  225 (236)
T PF01370_consen  146 AAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN  225 (236)
T ss_dssp             HHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC
Confidence            433         38999999999999999    44558888999999999999999999999999999999999999999


Q ss_pred             CCcCCCcEEEec
Q 015746          285 PEAASSNIFNLV  296 (401)
Q Consensus       285 ~~~~~g~~~~~~  296 (401)
                      +... +++||++
T Consensus       226 ~~~~-~~~yNig  236 (236)
T PF01370_consen  226 PKAA-GGIYNIG  236 (236)
T ss_dssp             SCTT-TEEEEES
T ss_pred             CCCC-CCEEEeC
Confidence            9933 5899985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=9.3e-29  Score=220.69  Aligned_cols=266  Identities=18%  Similarity=0.190  Sum_probs=193.4

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcccEE
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV  156 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d~V  156 (401)
                      |+||    |||||||++|+.+|.+.||+|++++|++.+......           ..+.    ..+.+...... .+|+|
T Consensus         1 IliT----GgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~----~~~~~~~~~~~-~~Dav   60 (297)
T COG1090           1 ILIT----GGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT----LWEGLADALTL-GIDAV   60 (297)
T ss_pred             CeEe----ccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc----ccchhhhcccC-CCCEE
Confidence            6899    999999999999999999999999999976643211           1122    12334444442 36999


Q ss_pred             EeCCCCC------------------hhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCCCCCCCCCCh---HH
Q 015746          157 LDNNGKN------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQ  213 (401)
Q Consensus       157 v~~a~~~------------------~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~---~~  213 (401)
                      ||+||.+                  +..|..|+++..+.  +.+.||..|.++.||+..+..++|+++....-..   +.
T Consensus        61 INLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~  140 (297)
T COG1090          61 INLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQD  140 (297)
T ss_pred             EECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHH
Confidence            9999953                  67788999988744  6678999999999999999999999665543111   22


Q ss_pred             HHHHHHH---hCCCeEEEecCeeecCCCCCCcHHHHHH--HHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcC
Q 015746          214 VEKYISE---NFSNWASFRPQYMIGSGNNKDCEEWFFD--RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (401)
Q Consensus       214 ~ek~~~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~  288 (401)
                      .|+....   .|.+++++|.|+|.++....  +..++.  +.--|++   +|+|.|+++|||++|+++++..++++....
T Consensus       141 WE~~a~~a~~~gtRvvllRtGvVLs~~GGa--L~~m~~~fk~glGG~---~GsGrQ~~SWIhieD~v~~I~fll~~~~ls  215 (297)
T COG1090         141 WEEEALQAQQLGTRVVLLRTGVVLSPDGGA--LGKMLPLFKLGLGGK---LGSGRQWFSWIHIEDLVNAILFLLENEQLS  215 (297)
T ss_pred             HHHHHhhhhhcCceEEEEEEEEEecCCCcc--hhhhcchhhhccCCc---cCCCCceeeeeeHHHHHHHHHHHHhCcCCC
Confidence            3443332   28899999999999986542  222211  1222333   499999999999999999999999998885


Q ss_pred             CCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC-CHHHHHH
Q 015746          289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLK  367 (401)
Q Consensus       289 ~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~-~l~e~l~  367 (401)
                      +  .||+++|.+++.+|+...+++.++++..+ .+|.........+..........+-+.|+.+ .||+.++ ++++++.
T Consensus       216 G--p~N~taP~PV~~~~F~~al~r~l~RP~~~-~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~-aGF~F~y~dl~~AL~  291 (297)
T COG1090         216 G--PFNLTAPNPVRNKEFAHALGRALHRPAIL-PVPSFALRLLLGEMADLLLGGQRVLPKKLEA-AGFQFQYPDLEEALA  291 (297)
T ss_pred             C--cccccCCCcCcHHHHHHHHHHHhCCCccc-cCcHHHHHHHhhhhHHHHhccchhhHHHHHH-CCCeeecCCHHHHHH
Confidence            4  99999999999999999999999988765 4555433222221111122333344667765 7999887 8999999


Q ss_pred             HHHH
Q 015746          368 ERFE  371 (401)
Q Consensus       368 ~~~~  371 (401)
                      +++.
T Consensus       292 ~il~  295 (297)
T COG1090         292 DILK  295 (297)
T ss_pred             HHHh
Confidence            8765

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=2.7e-28  Score=230.42  Aligned_cols=263  Identities=22%  Similarity=0.240  Sum_probs=181.7

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcccEE
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV  156 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d~V  156 (401)
                      ||||    ||+||||+++++.|+++||+|++++|+.+........           .+..+  +...+...+.+  +|+|
T Consensus         1 vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~--~~~~~~~~~~~--~D~V   61 (292)
T TIGR01777         1 ILIT----GGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-----------GYKPW--APLAESEALEG--ADAV   61 (292)
T ss_pred             CEEE----cccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-----------eeecc--cccchhhhcCC--CCEE
Confidence            6999    9999999999999999999999999988654321100           11111  11333445554  5999


Q ss_pred             EeCCCC------------------ChhhHHHHHHHHHhCCCC--EEEEecccccccCCCCCCCCCCCCCCCCC----ChH
Q 015746          157 LDNNGK------------------NLDAVRPVADWAKSSGVK--QFLFISSAGIYKPADEPPHVEGDVVKPDA----GHV  212 (401)
Q Consensus       157 v~~a~~------------------~~~~~~~ll~aa~~~gv~--~~v~~SS~~vy~~~~~~~~~E~~~~~~~~----~~~  212 (401)
                      ||+++.                  |+.++.+++++|++.+++  +||+.|+.++|+.....++.|+.+..+..    .+.
T Consensus        62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~  141 (292)
T TIGR01777        62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCR  141 (292)
T ss_pred             EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHH
Confidence            999983                  466799999999999873  67778888899976666788877443220    122


Q ss_pred             HHHHHH---HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCC
Q 015746          213 QVEKYI---SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  289 (401)
Q Consensus       213 ~~ek~~---~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~  289 (401)
                      ..|+.+   .+.+++++++||+++||+.+.  ....++........ ..++++++.++|+|++|+|+++..+++++..  
T Consensus       142 ~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~--  216 (292)
T TIGR01777       142 DWEEAAQAAEDLGTRVVLLRTGIVLGPKGG--ALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALENASI--  216 (292)
T ss_pred             HHHHHhhhchhcCCceEEEeeeeEECCCcc--hhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhcCccc--
Confidence            233332   234799999999999999643  23333222221111 2257788999999999999999999987654  


Q ss_pred             CcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCC-ccceEeechHHHHHhcCCCCCC-CHHHHH
Q 015746          290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF-RNMHFYAEPRAAKDILGWRSTT-NLPEDL  366 (401)
Q Consensus       290 g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~k~~~~lG~~p~~-~l~e~l  366 (401)
                      +++||+++++.++++|+++.+.+.+|.+..+ .+|.........+ .+. .......+++|+++ +||+|.+ +++|++
T Consensus       217 ~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~  292 (292)
T TIGR01777       217 SGPVNATAPEPVRNKEFAKALARALHRPAFF-PVPAFVLRALLGE-MADLLLKGQRVLPEKLLE-AGFQFQYPDLDEAL  292 (292)
T ss_pred             CCceEecCCCccCHHHHHHHHHHHhCCCCcC-cCCHHHHHHHhch-hhHHHhCCcccccHHHHh-cCCeeeCcChhhcC
Confidence            3699999999999999999999999976543 3333221111000 111 11345577889875 9999998 688764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=5.4e-28  Score=237.23  Aligned_cols=235  Identities=17%  Similarity=0.234  Sum_probs=182.7

Q ss_pred             ccccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHH
Q 015746           69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        69 ~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~  145 (401)
                      .....+++||||    |||||||++++++|+++||+|++++|+..+........  ... ...++++++.+|   ++++.
T Consensus        55 ~~~~~~~kVLVt----GatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~--~~~-~~~~~v~~v~~Dl~d~~~l~  127 (390)
T PLN02657         55 SKEPKDVTVLVV----GATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKE--DTK-KELPGAEVVFGDVTDADSLR  127 (390)
T ss_pred             ccCCCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhh--HHh-hhcCCceEEEeeCCCHHHHH
Confidence            344567899999    99999999999999999999999999875432110000  000 011367788887   77788


Q ss_pred             HhhcCC--cccEEEeCCCC-----------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          146 NVVGGV--TFDVVLDNNGK-----------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       146 ~~~~~~--~~d~Vv~~a~~-----------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      +++++.  ++|+|||+++.           |+.++.+++++|++.|+++||++||.++|++.     .+     ...+|.
T Consensus       128 ~~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~-----~~-----~~~sK~  197 (390)
T PLN02657        128 KVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPL-----LE-----FQRAKL  197 (390)
T ss_pred             HHHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcc-----hH-----HHHHHH
Confidence            888754  47999998762           46778999999999999999999999887432     11     123677


Q ss_pred             HHHHHHHH--hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee-eeeeHHHHHHHHHHHhcCCCcCC
Q 015746          213 QVEKYISE--NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT-NIAHVRDLSSMLTLAVENPEAAS  289 (401)
Q Consensus       213 ~~ek~~~e--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~D~a~~~~~~~~~~~~~~  289 (401)
                      ..|+.+.+  .+++++++||+.+||+.      ..++..+..++++.++|+++..+ ++||++|+|++++.++.++... 
T Consensus       198 ~~E~~l~~~~~gl~~tIlRp~~~~~~~------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~-  270 (390)
T PLN02657        198 KFEAELQALDSDFTYSIVRPTAFFKSL------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKI-  270 (390)
T ss_pred             HHHHHHHhccCCCCEEEEccHHHhccc------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcccc-
Confidence            78888776  78999999999999752      22466777888888889988654 5799999999999999876544 


Q ss_pred             CcEEEecCC-CCCCHHHHHHHHHHHhCCCceEEecCCCc
Q 015746          290 SNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKA  327 (401)
Q Consensus       290 g~~~~~~~~-~~~t~~el~~~i~~~~g~~~~~~~~~~~~  327 (401)
                      +++||++++ +.+|++|+++++.+.+|++.++..+|...
T Consensus       271 ~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~  309 (390)
T PLN02657        271 NKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQI  309 (390)
T ss_pred             CCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHH
Confidence            489999986 68999999999999999998888776543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.96  E-value=4.7e-28  Score=232.51  Aligned_cols=254  Identities=15%  Similarity=0.168  Sum_probs=186.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ++|+||||    ||+||||++++++|+++|  ++|++++|+..+...+.       ..+...+++++.+|   .+.+.++
T Consensus         3 ~~k~vLVT----GatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~~v~~Dl~d~~~l~~~   71 (324)
T TIGR03589         3 NNKSILIT----GGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQ-------QKFPAPCLRFFIGDVRDKERLTRA   71 (324)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHH-------HHhCCCcEEEEEccCCCHHHHHHH
Confidence            46899999    999999999999999986  78999988764321110       01111356677777   6777778


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCCh
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~  211 (401)
                      +++  +|+|||+|+.                |+.++.+++++|++.++++||++||...+.+     .     ..+..+|
T Consensus        72 ~~~--iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p-----~-----~~Y~~sK  139 (324)
T TIGR03589        72 LRG--VDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANP-----I-----NLYGATK  139 (324)
T ss_pred             Hhc--CCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC-----C-----CHHHHHH
Confidence            876  5999999983                4678999999999999999999999643211     0     0122356


Q ss_pred             HHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCC-CcccCCCCcceeeeeeHHHHHHHHHHHhc
Q 015746          212 VQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (401)
Q Consensus       212 ~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a~~~~~~~~  283 (401)
                      .++|+++..       .|++++++||+++|||+.  .+++.+...+..+. ++++. ++.+.++|+|++|++++++.+++
T Consensus       140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHh
Confidence            666665532       479999999999999864  36677776666665 46664 57788999999999999999998


Q ss_pred             CCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHH
Q 015746          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP  363 (401)
Q Consensus       284 ~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~  363 (401)
                      +..  ++++|+ +.+..+++.|+++.+.+..+  ..+  .+.+..+.         .....+|.++++++|||+|+++++
T Consensus       217 ~~~--~~~~~~-~~~~~~sv~el~~~i~~~~~--~~~--~~~~~g~~---------~~~~~~~~~~~~~~lg~~~~~~l~  280 (324)
T TIGR03589       217 RML--GGEIFV-PKIPSMKITDLAEAMAPECP--HKI--VGIRPGEK---------LHEVMITEDDARHTYELGDYYAIL  280 (324)
T ss_pred             hCC--CCCEEc-cCCCcEEHHHHHHHHHhhCC--eeE--eCCCCCch---------hHhhhcChhhhhhhcCCCCeEEEc
Confidence            743  257885 55667999999999999653  222  12211110         123447899999999999999999


Q ss_pred             HHHHH
Q 015746          364 EDLKE  368 (401)
Q Consensus       364 e~l~~  368 (401)
                      ++++.
T Consensus       281 ~~~~~  285 (324)
T TIGR03589       281 PSISF  285 (324)
T ss_pred             ccccc
Confidence            99874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=4.9e-27  Score=221.95  Aligned_cols=297  Identities=16%  Similarity=0.179  Sum_probs=216.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ++.+++||    ||+||+|+|++++|++++  .+|++++..+.......     +...+....++.+.+|..+...+..+
T Consensus         3 ~~~~vlVt----GG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~-----e~~~~~~~~v~~~~~D~~~~~~i~~a   73 (361)
T KOG1430|consen    3 KKLSVLVT----GGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPA-----ELTGFRSGRVTVILGDLLDANSISNA   73 (361)
T ss_pred             cCCEEEEE----CCccHHHHHHHHHHHhcccccEEEEeccCccccccch-----hhhcccCCceeEEecchhhhhhhhhh
Confidence            46789999    999999999999999998  79999998774221100     00111245788888885554444444


Q ss_pred             Cc-ccEEEeCCC----------------CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCC-CCCCCC------CC
Q 015746          151 VT-FDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP-HVEGDV------VK  206 (401)
Q Consensus       151 ~~-~d~Vv~~a~----------------~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~-~~E~~~------~~  206 (401)
                      .+ + .|+|+++                .|+.+|.+++++|++.|+++|||+||.+|........ .+|+.+      ..
T Consensus        74 ~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~  152 (361)
T KOG1430|consen   74 FQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDP  152 (361)
T ss_pred             ccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccc
Confidence            32 4 6777766                3899999999999999999999999999876554322 222222      22


Q ss_pred             CCCChHHHHHHHHHhC----CCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHh
Q 015746          207 PDAGHVQVEKYISENF----SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (401)
Q Consensus       207 ~~~~~~~~ek~~~e~g----~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~  282 (401)
                      +..+|..+|+++.+..    +..++|||..||||++.. .++.++..+..++..-..+++..+.++++++.++.+++.+.
T Consensus       153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~-~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~  231 (361)
T KOG1430|consen  153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR-LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAA  231 (361)
T ss_pred             cchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc-ccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHH
Confidence            3356777888887763    679999999999998765 56666777888888888888888899999999998887764


Q ss_pred             c----CCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccc----------cccccCC----C----c
Q 015746          283 E----NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGI----------DAKKAFP----F----R  339 (401)
Q Consensus       283 ~----~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~----------~~~~~~~----~----~  339 (401)
                      .    +....+|++|+|.+++++...+....+.+.+|...+ ....|-.....          ..++.-|    .    .
T Consensus       232 ~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~  311 (361)
T KOG1430|consen  232 RALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALL  311 (361)
T ss_pred             HHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeee
Confidence            3    344456899999999999999999999999999877 32322211000          0000011    1    1


Q ss_pred             cceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCC
Q 015746          340 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDK  380 (401)
Q Consensus       340 ~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  380 (401)
                      .-...++.+|++++|||+|..+++|++.+++.|+.......
T Consensus       312 ~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~~  352 (361)
T KOG1430|consen  312 GVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDSA  352 (361)
T ss_pred             ccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhcc
Confidence            13456789999999999999999999999999887765443

>PLN02778 3,5-epimerase/4-reductase

Probab=99.95  E-value=3.7e-26  Score=216.61  Aligned_cols=258  Identities=16%  Similarity=0.119  Sum_probs=184.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ..|+||||    ||+||||++|+++|+++||+|+...++.                          .|.+.+...+...+
T Consensus         8 ~~~kiLVt----G~tGfiG~~l~~~L~~~g~~V~~~~~~~--------------------------~~~~~v~~~l~~~~   57 (298)
T PLN02778          8 ATLKFLIY----GKTGWIGGLLGKLCQEQGIDFHYGSGRL--------------------------ENRASLEADIDAVK   57 (298)
T ss_pred             CCCeEEEE----CCCCHHHHHHHHHHHhCCCEEEEecCcc--------------------------CCHHHHHHHHHhcC
Confidence            35899999    9999999999999999999997532211                          14455666666667


Q ss_pred             ccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC------CCCCCCCCCCCC
Q 015746          153 FDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD------EPPHVEGDVVKP  207 (401)
Q Consensus       153 ~d~Vv~~a~~-------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~------~~~~~E~~~~~~  207 (401)
                      +|+|||+|+.                   |+.++.+++++|++.|++ ++++||.++|+...      ..++.|++++.+
T Consensus        58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~  136 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNF  136 (298)
T ss_pred             CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCC
Confidence            8999999983                   466899999999999996 66778888886532      224777776655


Q ss_pred             CCChHHHHHHHHHh----CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhc
Q 015746          208 DAGHVQVEKYISEN----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (401)
Q Consensus       208 ~~~~~~~ek~~~e~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~  283 (401)
                      ..+.|+..|.+.|.    ..+..++|+..++|++..  ....|+..++.++++...+     .+|+|++|++++++.+++
T Consensus       137 ~~s~Yg~sK~~~E~~~~~y~~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~  209 (298)
T PLN02778        137 TGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAK  209 (298)
T ss_pred             CCCchHHHHHHHHHHHHHhhccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHh
Confidence            54667776666664    235788999888886532  2345788888887755443     379999999999999997


Q ss_pred             CCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHH
Q 015746          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP  363 (401)
Q Consensus       284 ~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~  363 (401)
                      ...   +++||+++++.+++.|+++++++.+|.+.++..+.-.+..  .....|.  ....+|++|+++.++-.++ ..+
T Consensus       210 ~~~---~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~--~~~~~~~--~~~~Ld~~k~~~~~~~~~~-~~~  281 (298)
T PLN02778        210 RNL---TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQA--KVIVAPR--SNNELDTTKLKREFPELLP-IKE  281 (298)
T ss_pred             CCC---CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHH--HHHhCCC--ccccccHHHHHHhcccccc-hHH
Confidence            643   2599999999999999999999999965432211111110  0000011  1225899999998775443 578


Q ss_pred             HHHHHHHHHHHHh
Q 015746          364 EDLKERFEEYVKI  376 (401)
Q Consensus       364 e~l~~~~~~~~~~  376 (401)
                      ++++..++.++..
T Consensus       282 ~~~~~~~~~~~~~  294 (298)
T PLN02778        282 SLIKYVFEPNKKT  294 (298)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999988887644

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=243.33  Aligned_cols=287  Identities=18%  Similarity=0.231  Sum_probs=198.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHH--hCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---------hh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELL--GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---------AE  143 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---------~~  143 (401)
                      |+||||    |||||||++++++|+  ++|++|++++|..... .+..    ........+++++.+|.         +.
T Consensus         1 m~ILVT----GatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~-~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   71 (657)
T PRK07201          1 MRYFVT----GGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS-RLEA----LAAYWGADRVVPLVGDLTEPGLGLSEAD   71 (657)
T ss_pred             CeEEEe----CCccHHHHHHHHHHHhcCCCCEEEEEECcchHH-HHHH----HHHhcCCCcEEEEecccCCccCCcCHHH
Confidence            589999    999999999999999  5799999999964321 1000    00000113577777773         23


Q ss_pred             HHHhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC-----
Q 015746          144 VGNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-----  205 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~-----  205 (401)
                      +..+ .  ++|+|||+|+.             |+.++.+++++|++.++++|||+||.++|+.... ++.|+...     
T Consensus        72 ~~~l-~--~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~  147 (657)
T PRK07201         72 IAEL-G--DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGL  147 (657)
T ss_pred             HHHh-c--CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCC
Confidence            4443 4  46999999983             7889999999999999999999999999986532 34444321     


Q ss_pred             --CCCCChHHHHHHHHH-hCCCeEEEecCeeecCCCCCCc--------HHHHHHHHHc-CCCcccCCCCcceeeeeeHHH
Q 015746          206 --KPDAGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKDC--------EEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       206 --~~~~~~~~~ek~~~e-~g~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D  273 (401)
                        .+..+|..+|+++.+ .+++++++||++|||+...+..        +..++..+.. ....++++.+...++++|++|
T Consensus       148 ~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdd  227 (657)
T PRK07201        148 PTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDY  227 (657)
T ss_pred             CCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHH
Confidence              122456667777764 4899999999999998643211        1112223211 112344555667789999999


Q ss_pred             HHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCc---eEEecCCCccccccc-----------------
Q 015746          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV---EIVHYDPKAAGIDAK-----------------  333 (401)
Q Consensus       274 ~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~---~~~~~~~~~~~~~~~-----------------  333 (401)
                      +++++..+++.+... |++||+++++++++.|+++.+.+.+|.+.   ....+|.........                 
T Consensus       228 va~ai~~~~~~~~~~-g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (657)
T PRK07201        228 VADALDHLMHKDGRD-GQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLG  306 (657)
T ss_pred             HHHHHHHHhcCcCCC-CCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcC
Confidence            999999998865443 58999999999999999999999999877   444444321100000                 


Q ss_pred             ---ccCCCccceEeechHHHHHhc---CCCCCCCHHHHHHHHHHHHHHh
Q 015746          334 ---KAFPFRNMHFYAEPRAAKDIL---GWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       334 ---~~~~~~~~~~~~~~~k~~~~l---G~~p~~~l~e~l~~~~~~~~~~  376 (401)
                         ....+......+|.+++++.|   |+... .+.+.+.+.++||.++
T Consensus       307 ~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        307 IPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERH  354 (657)
T ss_pred             CCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhc
Confidence               001112244578889999888   55543 6889999999988776

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=3.5e-26  Score=215.72  Aligned_cols=216  Identities=16%  Similarity=0.217  Sum_probs=163.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC----C
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG----V  151 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~----~  151 (401)
                      +||||    ||||+||++++++|+++|++|++++|++++....           ....+...+.|++.+..+++.    .
T Consensus         1 ~ilVt----GatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~d~~d~~~l~~a~~~~~~~~   65 (285)
T TIGR03649         1 TILLT----GGTGKTASRIARLLQAASVPFLVASRSSSSSAGP-----------NEKHVKFDWLDEDTWDNPFSSDDGME   65 (285)
T ss_pred             CEEEE----cCCChHHHHHHHHHHhCCCcEEEEeCCCccccCC-----------CCccccccCCCHHHHHHHHhcccCcC
Confidence            58999    9999999999999999999999999998643210           001223334458888888832    1


Q ss_pred             c-ccEEEeCCCC---ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHh-CCCeE
Q 015746          152 T-FDVVLDNNGK---NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWA  226 (401)
Q Consensus       152 ~-~d~Vv~~a~~---~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~-g~~~~  226 (401)
                      + +|.|+|+++.   ......+++++|++.|++|||++||.+++...              ..+...++++++. |++++
T Consensus        66 g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~--------------~~~~~~~~~l~~~~gi~~t  131 (285)
T TIGR03649        66 PEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGG--------------PAMGQVHAHLDSLGGVEYT  131 (285)
T ss_pred             CceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCC--------------chHHHHHHHHHhccCCCEE
Confidence            2 5999998874   24678899999999999999999987654211              1344567888886 99999


Q ss_pred             EEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHH
Q 015746          227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  306 (401)
Q Consensus       227 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el  306 (401)
                      +|||+++|+.....    .++..+..+..+ ..+.++..++|||++|+|++++.++.++... +++|++.+++.+|++|+
T Consensus       132 ilRp~~f~~~~~~~----~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~-~~~~~l~g~~~~s~~ei  205 (285)
T TIGR03649       132 VLRPTWFMENFSEE----FHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYRALTDKVAP-NTDYVVLGPELLTYDDV  205 (285)
T ss_pred             EEeccHHhhhhccc----ccccccccCCeE-EecCCCCccCcccHHHHHHHHHHHhcCCCcC-CCeEEeeCCccCCHHHH
Confidence            99999988653111    112223333333 3345677799999999999999999987554 38999999999999999


Q ss_pred             HHHHHHHhCCCceEEecCCC
Q 015746          307 AKLCAQAAGLPVEIVHYDPK  326 (401)
Q Consensus       307 ~~~i~~~~g~~~~~~~~~~~  326 (401)
                      ++.+.+.+|+++.+..+++.
T Consensus       206 a~~l~~~~g~~v~~~~~~~~  225 (285)
T TIGR03649       206 AEILSRVLGRKITHVKLTEE  225 (285)
T ss_pred             HHHHHHHhCCceEEEeCCHH
Confidence            99999999999988877664

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=4.8e-25  Score=209.15  Aligned_cols=253  Identities=14%  Similarity=0.098  Sum_probs=170.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+||||++++++|+++||+|+++.|+........     .+..+  ...+++++.+|   .+.+..+
T Consensus         5 ~~k~vlVT----GatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~~l~~~~~~~~~~~~Dl~d~~~~~~~   75 (297)
T PLN02583          5 SSKSVCVM----DASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEK-----EIRGLSCEEERLKVFDVDPLDYHSILDA   75 (297)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHH-----HHHhcccCCCceEEEEecCCCHHHHHHH
Confidence            35789999    99999999999999999999999998643211000     00111  01256777777   6677788


Q ss_pred             hcCCcccEEEeCCC--------------CChhhHHHHHHHHHhC-CCCEEEEecccccc--cCC---CCCCCCCCCCCCC
Q 015746          148 VGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVKP  207 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~--------------~~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy--~~~---~~~~~~E~~~~~~  207 (401)
                      +.++  |.|+|.++              .|+.++.+++++|.+. ++++||++||..++  ++.   ...+++|+.+..+
T Consensus        76 l~~~--d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~  153 (297)
T PLN02583         76 LKGC--SGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQ  153 (297)
T ss_pred             HcCC--CEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCH
Confidence            8875  99999754              2578999999999886 68899999998764  311   2235677665322


Q ss_pred             ----------CCChHHHHHHHH----HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          208 ----------DAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       208 ----------~~~~~~~ek~~~----e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                                ..+|..+|+++.    +.++++++|||++||||+.....      ..+.+.. ..++++  .++||||+|
T Consensus       154 ~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~------~~~~~~~-~~~~~~--~~~~v~V~D  224 (297)
T PLN02583        154 NFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN------PYLKGAA-QMYENG--VLVTVDVNF  224 (297)
T ss_pred             HHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch------hhhcCCc-ccCccc--CcceEEHHH
Confidence                      123444555543    34899999999999999764321      1222322 223333  367999999


Q ss_pred             HHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHh
Q 015746          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI  353 (401)
Q Consensus       274 ~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  353 (401)
                      +|++++.+++++..  ++.|++.++....+.++++++.+.++.- ++   +.......     + ......++++|+++ 
T Consensus       225 va~a~~~al~~~~~--~~r~~~~~~~~~~~~~~~~~~~~~~p~~-~~---~~~~~~~~-----~-~~~~~~~~~~k~~~-  291 (297)
T PLN02583        225 LVDAHIRAFEDVSS--YGRYLCFNHIVNTEEDAVKLAQMLSPLI-PS---PPPYEMQG-----S-EVYQQRIRNKKLNK-  291 (297)
T ss_pred             HHHHHHHHhcCccc--CCcEEEecCCCccHHHHHHHHHHhCCCC-CC---CCcccccC-----C-CccccccChHHHHH-
Confidence            99999999997765  3479888876566788999999998632 11   11100000     0 01335578899976 


Q ss_pred             cCCCC
Q 015746          354 LGWRS  358 (401)
Q Consensus       354 lG~~p  358 (401)
                      |||+.
T Consensus       292 l~~~~  296 (297)
T PLN02583        292 LMEDF  296 (297)
T ss_pred             hCccc
Confidence            99864

>PLN02996 fatty acyl-CoA reductase

Probab=99.93  E-value=6e-25  Score=221.14  Aligned_cols=241  Identities=14%  Similarity=0.149  Sum_probs=172.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCC-------CC-C--------Ccccchhc
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKK-------PP-F--------NRFNEIVS  131 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~-------~~-~--------~~~~~l~~  131 (401)
                      ...+++||||    |||||||++++++|++.+.   +|+++.|..........       .+ +        ..+.+...
T Consensus         8 ~~~~k~VlvT----GaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~   83 (491)
T PLN02996          8 FLENKTILVT----GATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS   83 (491)
T ss_pred             HhCCCeEEEe----CCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence            3567899999    9999999999999998753   68999997754322110       00 0        01111112


Q ss_pred             CCCeEEEcCHh----------hHHHhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhC-CCCEEEEecc
Q 015746          132 AGGKTVWGDPA----------EVGNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSS-GVKQFLFISS  187 (401)
Q Consensus       132 ~~~~~~~~D~~----------~~~~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~-gv~~~v~~SS  187 (401)
                      .+++++.||..          .+..++++  +|+|||+|+.             |+.++.+++++|++. ++++|||+||
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~--vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST  161 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWKE--IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST  161 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHhC--CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence            57899999932          24566665  5999999983             789999999999986 7889999999


Q ss_pred             cccccCCC----CCCCCCCC---------------------------------------------------CCCCCCChH
Q 015746          188 AGIYKPAD----EPPHVEGD---------------------------------------------------VVKPDAGHV  212 (401)
Q Consensus       188 ~~vy~~~~----~~~~~E~~---------------------------------------------------~~~~~~~~~  212 (401)
                      .+|||...    +.++.+..                                                   +..+..+|.
T Consensus       162 ~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~  241 (491)
T PLN02996        162 AYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKA  241 (491)
T ss_pred             eEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHH
Confidence            99998642    11222100                                                   011223444


Q ss_pred             HHHHHHHHh--CCCeEEEecCeeecCCCCCC--------cHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHh
Q 015746          213 QVEKYISEN--FSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (401)
Q Consensus       213 ~~ek~~~e~--g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~  282 (401)
                      .+|+++.++  +++++++||++|||++..+.        ....++..+.+|....++|++++.++++||+|++++++.++
T Consensus       242 ~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~  321 (491)
T PLN02996        242 MGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM  321 (491)
T ss_pred             HHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence            455555443  79999999999999875431        11233444566676678899999999999999999999998


Q ss_pred             cCCC--cCCCcEEEecCC--CCCCHHHHHHHHHHHhCCC
Q 015746          283 ENPE--AASSNIFNLVSD--RAVTLDGMAKLCAQAAGLP  317 (401)
Q Consensus       283 ~~~~--~~~g~~~~~~~~--~~~t~~el~~~i~~~~g~~  317 (401)
                      ....  ...+++||++++  +++++.|+++.+.+.++..
T Consensus       322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence            7631  122579999998  8999999999999988643

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.92  E-value=1.2e-23  Score=204.78  Aligned_cols=236  Identities=19%  Similarity=0.269  Sum_probs=163.9

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcc---cCCCCC-CCccc--chhcCCCeEEEcCH------
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSD---KMKKPP-FNRFN--EIVSAGGKTVWGDP------  141 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~---~~~~~~-~~~~~--~l~~~~~~~~~~D~------  141 (401)
                      +||||    |||||||++++++|+++|  ++|+++.|+.+...   ++.... ...+.  .....+++++.+|.      
T Consensus         1 ~vlvt----GatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~g   76 (367)
T TIGR01746         1 TVLLT----GATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLG   76 (367)
T ss_pred             CEEEe----ccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCC
Confidence            58999    999999999999999999  67999999865321   110000 00000  00013678888882      


Q ss_pred             ---hhHHHhhcCCcccEEEeCCC-------------CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC
Q 015746          142 ---AEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (401)
Q Consensus       142 ---~~~~~~~~~~~~d~Vv~~a~-------------~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~  205 (401)
                         +.+..+..+  +|+|||+++             .|+.++.+++++|.+.++++|||+||.++|+.....+..|+.+.
T Consensus        77 l~~~~~~~~~~~--~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~  154 (367)
T TIGR01746        77 LSDAEWERLAEN--VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI  154 (367)
T ss_pred             cCHHHHHHHHhh--CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence               345555554  599999998             36788999999999999989999999999986433332333221


Q ss_pred             ---------CCCCChHHHHHHHHHh---CCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCc-ceee
Q 015746          206 ---------KPDAGHVQVEKYISEN---FSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGM-QFTN  267 (401)
Q Consensus       206 ---------~~~~~~~~~ek~~~e~---g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~  267 (401)
                               .+..+|+.+|+++.+.   |++++++||+.+||+...+     ..+..++......+.+   .+.. ...+
T Consensus       155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~  231 (367)
T TIGR01746       155 VTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY---PDSPELTED  231 (367)
T ss_pred             cccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC---CCCCccccC
Confidence                     1223455566655543   8999999999999974322     1233333333333322   2222 3578


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEE
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV  321 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~  321 (401)
                      |+|++|++++++.++..+.. .++++||++++++++++|+++.+.+ +|.+.+..
T Consensus       232 ~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~  285 (367)
T TIGR01746       232 LTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLV  285 (367)
T ss_pred             cccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcC
Confidence            99999999999999987654 2258999999999999999999999 88876643

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK12320 hypothetical protein; Provisional

Probab=99.92  E-value=2.2e-23  Score=213.87  Aligned_cols=225  Identities=16%  Similarity=0.209  Sum_probs=162.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH--hhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~--~~~~~~~~~~~  152 (401)
                      ||||||    ||+||||++++++|+++||+|++++|.....              ...+++++.+|.  ..+.+++.+  
T Consensus         1 MkILVT----GAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------------~~~~ve~v~~Dl~d~~l~~al~~--   60 (699)
T PRK12320          1 MQILVT----DATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------------LDPRVDYVCASLRNPVLQELAGE--   60 (699)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------------ccCCceEEEccCCCHHHHHHhcC--
Confidence            589999    9999999999999999999999999865321              113577788872  235566665  


Q ss_pred             ccEEEeCCCC--------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCC
Q 015746          153 FDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (401)
Q Consensus       153 ~d~Vv~~a~~--------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~  224 (401)
                      +|+|||+++.        |+.++.|++++|++.|+ ++||+||.  ||...              .....|.++.+.+++
T Consensus        61 ~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~--------------~~~~aE~ll~~~~~p  123 (699)
T PRK12320         61 ADAVIHLAPVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE--------------LYRQAETLVSTGWAP  123 (699)
T ss_pred             CCEEEEcCccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc--------------cccHHHHHHHhcCCC
Confidence            5999999983        56889999999999998 69999986  33221              112478888888899


Q ss_pred             eEEEecCeeecCCCCCC---cHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCC
Q 015746          225 WASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (401)
Q Consensus       225 ~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~  301 (401)
                      ++++|++++||++....   ++..++....++++          ..++|++|++++++.+++.+.  + ++||+++++.+
T Consensus       124 ~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~p----------I~vIyVdDvv~alv~al~~~~--~-GiyNIG~~~~~  190 (699)
T PRK12320        124 SLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARP----------IRVLHLDDLVRFLVLALNTDR--N-GVVDLATPDTT  190 (699)
T ss_pred             EEEEeCceecCCCCcccHhHHHHHHHHHHHcCCc----------eEEEEHHHHHHHHHHHHhCCC--C-CEEEEeCCCee
Confidence            99999999999965432   33333333333332          345899999999999998643  2 49999999999


Q ss_pred             CHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHH
Q 015746          302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE  364 (401)
Q Consensus       302 t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e  364 (401)
                      |+.|+++++..... ...+.  +.            ..+....-+...++..++|.|+..|+.
T Consensus       191 Si~el~~~i~~~~p-~~~~~--~~------------~~~~~~~pdi~~a~~~~~w~~~~~~~~  238 (699)
T PRK12320        191 NVVTAWRLLRSVDP-HLRTR--RV------------RSWEQLIPEVDIAAVQEDWNFEFGWQA  238 (699)
T ss_pred             EHHHHHHHHHHhCC-Ccccc--cc------------ccHHHhCCCCchhhhhcCCCCcchHHH
Confidence            99999999977621 11111  00            011333456666777789999876654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.90  E-value=5.5e-22  Score=208.24  Aligned_cols=253  Identities=16%  Similarity=0.136  Sum_probs=176.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ....|+||||    ||+||||++|++.|.++|++|.....                      .+    .|.+.+...+..
T Consensus       377 ~~~~mkiLVt----Ga~G~iG~~l~~~L~~~g~~v~~~~~----------------------~l----~d~~~v~~~i~~  426 (668)
T PLN02260        377 GKPSLKFLIY----GRTGWIGGLLGKLCEKQGIAYEYGKG----------------------RL----EDRSSLLADIRN  426 (668)
T ss_pred             CCCCceEEEE----CCCchHHHHHHHHHHhCCCeEEeecc----------------------cc----ccHHHHHHHHHh
Confidence            3456899999    99999999999999999999842110                      01    166778888887


Q ss_pred             CcccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCC------CCCCCCCCCCC
Q 015746          151 VTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA------DEPPHVEGDVV  205 (401)
Q Consensus       151 ~~~d~Vv~~a~~-------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~------~~~~~~E~~~~  205 (401)
                      .++|+|||+|+.                   |+.++.+|+++|++.|++ +|++||.+||+..      ...|+.|++++
T Consensus       427 ~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        427 VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCC
Confidence            789999999973                   567899999999999995 7888898998642      13478888766


Q ss_pred             CCCCChHHHHHHHHHh----CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCC-cccCCCCcceeeeeeHHHHHHHHHH
Q 015746          206 KPDAGHVQVEKYISEN----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTL  280 (401)
Q Consensus       206 ~~~~~~~~~ek~~~e~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~~~~~  280 (401)
                      .+..+.|+..|+..|.    ..++.++|+.++||.+...  ...|+..+++... +.+ +     .+..+++|++.+++.
T Consensus       506 ~~~~~~Yg~sK~~~E~~~~~~~~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~v-p-----~~~~~~~~~~~~~~~  577 (668)
T PLN02260        506 NFTGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNI-P-----NSMTVLDELLPISIE  577 (668)
T ss_pred             CCCCChhhHHHHHHHHHHHhhhhheEEEEEEecccCCCC--ccHHHHHHhccceeecc-C-----CCceehhhHHHHHHH
Confidence            5544555555544443    1467889999999754221  1346667766544 223 2     235677889988888


Q ss_pred             HhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC
Q 015746          281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT  360 (401)
Q Consensus       281 ~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~  360 (401)
                      +++...   +++||+++++.+|+.|+++.+.+.++....+..+......   ......++.. .+|+.|+++.+|. + .
T Consensus       578 l~~~~~---~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~---~~~~a~rp~~-~l~~~k~~~~~~~-~-~  648 (668)
T PLN02260        578 MAKRNL---RGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQA---KVIVAPRSNN-EMDASKLKKEFPE-L-L  648 (668)
T ss_pred             HHHhCC---CceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhh---hHhhCCCccc-cccHHHHHHhCcc-c-c
Confidence            887422   3799999999999999999999988522112222211111   0011122344 7999999988898 5 4


Q ss_pred             CHHHHHHHHHH
Q 015746          361 NLPEDLKERFE  371 (401)
Q Consensus       361 ~l~e~l~~~~~  371 (401)
                      +|+|+|.+++.
T Consensus       649 ~~~~~l~~~~~  659 (668)
T PLN02260        649 SIKESLIKYVF  659 (668)
T ss_pred             chHHHHHHHHh
Confidence            89999998764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.90  E-value=6.1e-22  Score=193.27  Aligned_cols=223  Identities=21%  Similarity=0.257  Sum_probs=181.0

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      -..+|+||||    ||+|-||+.+++++++.+. +++.++|++-+...+...-...++   ...+.++.||   .+.+..
T Consensus       247 ~~~gK~vLVT----GagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~---~~~~~~~igdVrD~~~~~~  319 (588)
T COG1086         247 MLTGKTVLVT----GGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP---ELKLRFYIGDVRDRDRVER  319 (588)
T ss_pred             HcCCCEEEEe----CCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC---CcceEEEecccccHHHHHH
Confidence            3457999999    9999999999999999975 688889988665443321111111   2467788887   788889


Q ss_pred             hhcCCcccEEEeCCC----------------CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          147 VVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~----------------~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      ++++.+||+|+|+|+                .|+.|+.|++++|.++|+++||++||..+-.+..-          ...+
T Consensus       320 ~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNv----------mGaT  389 (588)
T COG1086         320 AMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNV----------MGAT  389 (588)
T ss_pred             HHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchH----------hhHH
Confidence            999999999999999                38999999999999999999999999775433211          1235


Q ss_pred             hHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhc
Q 015746          211 HVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (401)
Q Consensus       211 ~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~  283 (401)
                      |..+|+++...       +-.++.+|+|+|.|+.+  ..++.|.+++.+|+|+++. +.+-.|-|+.+.|.++.++++..
T Consensus       390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG--SViPlFk~QI~~GgplTvT-dp~mtRyfMTI~EAv~LVlqA~a  466 (588)
T COG1086         390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG--SVIPLFKKQIAEGGPLTVT-DPDMTRFFMTIPEAVQLVLQAGA  466 (588)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC--CCHHHHHHHHHcCCCcccc-CCCceeEEEEHHHHHHHHHHHHh
Confidence            66666666554       25689999999999964  4889999999999998875 46678899999999999999998


Q ss_pred             CCCcCCCcEEEecCCCCCCHHHHHHHHHHHhC
Q 015746          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (401)
Q Consensus       284 ~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g  315 (401)
                      ....  |++|.+..|++++..|+++.|-+..|
T Consensus       467 ~~~g--GeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         467 IAKG--GEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             hcCC--CcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            8555  79999999999999999999999997

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.89  E-value=7.7e-23  Score=188.22  Aligned_cols=212  Identities=20%  Similarity=0.298  Sum_probs=154.0

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCccc-chhcCCCe----EEEcC---HhhHHHh
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFN-EIVSAGGK----TVWGD---PAEVGNV  147 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~l~~~~~~----~~~~D---~~~~~~~  147 (401)
                      ||||    ||+|.||+.|+++|++.+. ++++++|++.+.-.+...    +. .....++.    .+.+|   .+.+..+
T Consensus         1 VLVT----Ga~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~----l~~~~~~~~v~~~~~~vigDvrd~~~l~~~   72 (293)
T PF02719_consen    1 VLVT----GAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERE----LRSRFPDPKVRFEIVPVIGDVRDKERLNRI   72 (293)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHH----CHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred             CEEE----ccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHH----HhhcccccCcccccCceeecccCHHHHHHH
Confidence            7999    9999999999999999984 799999988654332211    10 00112343    34666   7788999


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCCh
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~  211 (401)
                      ++..+||+|||+|+.                |+.+++|++++|.+.++++||++||.-+..+.               +-
T Consensus        73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Pt---------------nv  137 (293)
T PF02719_consen   73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPT---------------NV  137 (293)
T ss_dssp             TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-----------------SH
T ss_pred             HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCC---------------cH
Confidence            998889999999993                79999999999999999999999997765432               55


Q ss_pred             HHHHHHHHH-----h-------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHH
Q 015746          212 VQVEKYISE-----N-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (401)
Q Consensus       212 ~~~ek~~~e-----~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~  279 (401)
                      +++.|.++|     .       +..++++|+|+|.|+.  +.+++.|.+++.+|+|+.+.. .+-.|-|+.+++.++.++
T Consensus       138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~--GSVip~F~~Qi~~g~PlTvT~-p~mtRffmti~EAv~Lvl  214 (293)
T PF02719_consen  138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR--GSVIPLFKKQIKNGGPLTVTD-PDMTRFFMTIEEAVQLVL  214 (293)
T ss_dssp             HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT--TSCHHHHHHHHHTTSSEEECE-TT-EEEEE-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC--CcHHHHHHHHHHcCCcceeCC-CCcEEEEecHHHHHHHHH
Confidence            665555555     3       2468999999999985  448999999999999998754 567789999999999999


Q ss_pred             HHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCC
Q 015746          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (401)
Q Consensus       280 ~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~  316 (401)
                      .+......  |++|....|+++...||++.+.+.+|.
T Consensus       215 ~a~~~~~~--geifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  215 QAAALAKG--GEIFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             HHHHH--T--TEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred             HHHhhCCC--CcEEEecCCCCcCHHHHHHHHHhhccc
Confidence            99987665  789999999999999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.89  E-value=3.3e-22  Score=178.34  Aligned_cols=282  Identities=20%  Similarity=0.240  Sum_probs=201.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc-cCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +..+-|.    |||||+|++++.+|.+.|-+|++--|..+... .++...  .+.++.  -..+..-|++++.++++-. 
T Consensus        61 GiVaTVF----GAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG--dLGQvl--~~~fd~~DedSIr~vvk~s-  131 (391)
T KOG2865|consen   61 GIVATVF----GATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG--DLGQVL--FMKFDLRDEDSIRAVVKHS-  131 (391)
T ss_pred             ceEEEEe----cccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc--ccccee--eeccCCCCHHHHHHHHHhC-
Confidence            4567799    99999999999999999999999999875432 222111  111111  1233344799999999887 


Q ss_pred             ccEEEeCCCC------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 015746          153 FDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (401)
Q Consensus       153 ~d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e  220 (401)
                       .+|||+.|.            |+.+.+.+++.|++.|+.|||++|+.+..       +.  .+.....+|+..|+.+++
T Consensus       132 -NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------v~--s~Sr~LrsK~~gE~aVrd  201 (391)
T KOG2865|consen  132 -NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------VK--SPSRMLRSKAAGEEAVRD  201 (391)
T ss_pred             -cEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------cc--ChHHHHHhhhhhHHHHHh
Confidence             999999993            67889999999999999999999987632       11  111123489999999999


Q ss_pred             hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc-ceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM-QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       221 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      ...+.+|+||..+||..+.  +++.+.....+-+.+++++.|. ..-.+|+|-|+|.+|+.++.+++.. |++|..+|+.
T Consensus       202 afPeAtIirPa~iyG~eDr--fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~-Gktye~vGP~  278 (391)
T KOG2865|consen  202 AFPEATIIRPADIYGTEDR--FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSM-GKTYEFVGPD  278 (391)
T ss_pred             hCCcceeechhhhcccchh--HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcccc-CceeeecCCc
Confidence            9999999999999998754  5666555555567788888774 4566899999999999999999665 5999999999


Q ss_pred             CCCHHHHHHHHHHHhCCCceEEecCCCcccccc--c--ccCCCc--------------cceEeechHHHHHhcCCCCCCC
Q 015746          300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA--K--KAFPFR--------------NMHFYAEPRAAKDILGWRSTTN  361 (401)
Q Consensus       300 ~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--~--~~~~~~--------------~~~~~~~~~k~~~~lG~~p~~~  361 (401)
                      .+++.||++.+-+.+.....+...+-+......  .  ..-|+.              ....+++...-.++||..+ +.
T Consensus       279 ~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~-t~  357 (391)
T KOG2865|consen  279 RYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVL-TK  357 (391)
T ss_pred             hhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCcee-ee
Confidence            999999999999888654444333332111000  0  011111              1223334444445689886 57


Q ss_pred             HHHHHHHHHHHHHHhcC
Q 015746          362 LPEDLKERFEEYVKIGR  378 (401)
Q Consensus       362 l~e~l~~~~~~~~~~~~  378 (401)
                      ++..--+.+..|+..++
T Consensus       358 le~~~~e~l~~yR~~~~  374 (391)
T KOG2865|consen  358 LELYPVEFLRQYRKGGR  374 (391)
T ss_pred             cccccHHHHHHHhhccc
Confidence            88777777777776643

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.88  E-value=9e-21  Score=165.79  Aligned_cols=291  Identities=16%  Similarity=0.175  Sum_probs=212.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC-cccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-RFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+..|||    |-||.-|+++++-|+.+||+|.++.|......-.+-.... .........+..-.+|   ...+.+++.
T Consensus        28 rkvALIT----GItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~  103 (376)
T KOG1372|consen   28 RKVALIT----GITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS  103 (376)
T ss_pred             ceEEEEe----cccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence            3578999    9999999999999999999999999987664422110000 0011112345566666   677888999


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC---EEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK---QFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~---~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      ..+|+-|+|+|++                +-.++.+++++.+..+..   ||...|+...||...+.|..|..|..|. +
T Consensus       104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPR-S  182 (376)
T KOG1372|consen  104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPR-S  182 (376)
T ss_pred             ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCC-C
Confidence            8999999999984                456899999999988642   7999999999999989999999998875 9


Q ss_pred             hHHHHHHHHH---------hCCCeEEEecCeeec---CCCCCCcHHHHHHHHHc-----CCCcccCCCCcceeeeeeHHH
Q 015746          211 HVQVEKYISE---------NFSNWASFRPQYMIG---SGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       211 ~~~~ek~~~e---------~g~~~~ilRp~~v~G---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~v~D  273 (401)
                      +|++.|...-         +++-   -+-|++|.   |+.+.+++..-+.+.+.     .......|+-+..++|-|..|
T Consensus       183 PYa~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~d  259 (376)
T KOG1372|consen  183 PYAAAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGD  259 (376)
T ss_pred             hhHHhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHH
Confidence            9999885432         2221   12234443   45555565554444332     223344588888999999999


Q ss_pred             HHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCC-----C-----cccccccccCCCccceE
Q 015746          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP-----K-----AAGIDAKKAFPFRNMHF  343 (401)
Q Consensus       274 ~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~  343 (401)
                      .+++++.++.++..   .-|.++.++..+++|++++-....|....+.--..     .     ....+.+...|-....+
T Consensus       260 YVEAMW~mLQ~d~P---dDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~L  336 (376)
T KOG1372|consen  260 YVEAMWLMLQQDSP---DDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTL  336 (376)
T ss_pred             HHHHHHHHHhcCCC---CceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhh
Confidence            99999999999887   56999999999999999999999886544421100     0     11222244456666778


Q ss_pred             eechHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Q 015746          344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK  375 (401)
Q Consensus       344 ~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~  375 (401)
                      .-|.+|+++.|||+|+.++++-+++++..=.+
T Consensus       337 qGdasKAk~~LgW~pkv~f~eLVkeMv~~Die  368 (376)
T KOG1372|consen  337 QGDASKAKKTLGWKPKVTFPELVKEMVASDIE  368 (376)
T ss_pred             cCChHHHHHhhCCCCccCHHHHHHHHHHhHHH
Confidence            88999999999999999999999999875443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.87  E-value=4.9e-22  Score=181.87  Aligned_cols=219  Identities=22%  Similarity=0.368  Sum_probs=163.2

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCCcc
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~~~  153 (401)
                      |+|+    ||||.+|+.+++.|++.+++|++++|+..+.         ....+...+++++.+|   .+++.+++++.  
T Consensus         1 I~V~----GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~---------~~~~l~~~g~~vv~~d~~~~~~l~~al~g~--   65 (233)
T PF05368_consen    1 ILVT----GATGNQGRSVVRALLSAGFSVRALVRDPSSD---------RAQQLQALGAEVVEADYDDPESLVAALKGV--   65 (233)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTGCEEEEESSSHHH---------HHHHHHHTTTEEEES-TT-HHHHHHHHTTC--
T ss_pred             CEEE----CCccHHHHHHHHHHHhCCCCcEEEEeccchh---------hhhhhhcccceEeecccCCHHHHHHHHcCC--
Confidence            7999    9999999999999999999999999998432         2244555688999888   78888999987  


Q ss_pred             cEEEeCCCCC----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCeEEEe
Q 015746          154 DVVLDNNGKN----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR  229 (401)
Q Consensus       154 d~Vv~~a~~~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~~ilR  229 (401)
                      |+||.+.+..    .....+++++|+++|+|+||+.|-...+.... ....+   ......|+.+|+++++.+++|++||
T Consensus        66 d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~-~~~p~---~~~~~~k~~ie~~l~~~~i~~t~i~  141 (233)
T PF05368_consen   66 DAVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESS-GSEPE---IPHFDQKAEIEEYLRESGIPYTIIR  141 (233)
T ss_dssp             SEEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTT-TSTTH---HHHHHHHHHHHHHHHHCTSEBEEEE
T ss_pred             ceEEeecCcchhhhhhhhhhHHHhhhccccceEEEEEecccccccc-ccccc---chhhhhhhhhhhhhhhccccceecc
Confidence            9999887743    77899999999999999999766544442110 00000   0001256789999999999999999


Q ss_pred             cCeeecCCCCCCcHHHHHHHH--HcCC--CcccCCCCcceeeee-eHHHHHHHHHHHhcCCCcC-CCcEEEecCCCCCCH
Q 015746          230 PQYMIGSGNNKDCEEWFFDRI--VRKR--PVPIPGSGMQFTNIA-HVRDLSSMLTLAVENPEAA-SSNIFNLVSDRAVTL  303 (401)
Q Consensus       230 p~~v~G~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~v-~v~D~a~~~~~~~~~~~~~-~g~~~~~~~~~~~t~  303 (401)
                      +|.++......      +...  ..+.  .+.++++++....++ +.+|+++++..++.++... +++.+.+++ +.+|.
T Consensus       142 ~g~f~e~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~  214 (233)
T PF05368_consen  142 PGFFMENLLPP------FAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTY  214 (233)
T ss_dssp             E-EEHHHHHTT------THHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEH
T ss_pred             ccchhhhhhhh------hcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCH
Confidence            99876532111      1111  1111  356777777666775 9999999999999998776 467888775 77999


Q ss_pred             HHHHHHHHHHhCCCceEE
Q 015746          304 DGMAKLCAQAAGLPVEIV  321 (401)
Q Consensus       304 ~el~~~i~~~~g~~~~~~  321 (401)
                      +|+++.+.+.+|++++++
T Consensus       215 ~eia~~~s~~~G~~v~y~  232 (233)
T PF05368_consen  215 NEIAAILSKVLGKKVKYV  232 (233)
T ss_dssp             HHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHHHHHHCCccEEe
Confidence            999999999999988764

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.86  E-value=2e-21  Score=171.01  Aligned_cols=175  Identities=29%  Similarity=0.470  Sum_probs=135.5

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCCcc
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~~~  153 (401)
                      |+|+    ||||++|+.++++|+++||+|++++|++++...             ..+++++.+|   ++++.+++.++  
T Consensus         1 I~V~----GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~~~--   61 (183)
T PF13460_consen    1 ILVF----GATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALKGA--   61 (183)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHTTS--
T ss_pred             eEEE----CCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhhhc--
Confidence            7999    999999999999999999999999999875432             3588899888   77888999986  


Q ss_pred             cEEEeCCCC---ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC--CCCCCChHHHHHHHHHhCCCeEEE
Q 015746          154 DVVLDNNGK---NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV--VKPDAGHVQVEKYISENFSNWASF  228 (401)
Q Consensus       154 d~Vv~~a~~---~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~--~~~~~~~~~~ek~~~e~g~~~~il  228 (401)
                      |+||++++.   +...+++++++|++.|++|||++|+.++|+........+..+  ......+...|+++.+.+++|++|
T Consensus        62 d~vi~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~iv  141 (183)
T PF13460_consen   62 DAVIHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIV  141 (183)
T ss_dssp             SEEEECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEE
T ss_pred             chhhhhhhhhcccccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEE
Confidence            999999984   477899999999999999999999999998654321111111  011124556778888889999999


Q ss_pred             ecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcC
Q 015746          229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (401)
Q Consensus       229 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~  284 (401)
                      ||+.+||+.....             .+ +...+....++|+.+|+|++++.++++
T Consensus       142 rp~~~~~~~~~~~-------------~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  142 RPGWIYGNPSRSY-------------RL-IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EESEEEBTTSSSE-------------EE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             ECcEeEeCCCcce-------------eE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999864321             01 111334456899999999999999874

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.86  E-value=1.8e-20  Score=173.49  Aligned_cols=212  Identities=15%  Similarity=0.193  Sum_probs=148.9

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH----hhHHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGN  146 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~~~~  146 (401)
                      ...+|+||||    ||+|+||+.++++|+++||+|+++.|+.++......       .  ..+++++.+|.    +++.+
T Consensus        14 ~~~~~~ilIt----GasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------~--~~~~~~~~~Dl~d~~~~l~~   80 (251)
T PLN00141         14 NVKTKTVFVA----GATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-------Q--DPSLQIVRADVTEGSDKLVE   80 (251)
T ss_pred             cccCCeEEEE----CCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-------c--CCceEEEEeeCCCCHHHHHH
Confidence            3457899999    999999999999999999999999998754322110       0  12577777773    34445


Q ss_pred             hh-cCCcccEEEeCCCC------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC-CC----C
Q 015746          147 VV-GGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KP----D  208 (401)
Q Consensus       147 ~~-~~~~~d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~-~~----~  208 (401)
                      .+ .+  +|+||++++.            |..++.++++++++.++++||++||.++|+.....+..+.... ++    .
T Consensus        81 ~~~~~--~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~  158 (251)
T PLN00141         81 AIGDD--SDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTL  158 (251)
T ss_pred             HhhcC--CCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHH
Confidence            55 33  6999999874            3457899999999999999999999999985433332221111 10    0


Q ss_pred             CChHHHHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcC
Q 015746          209 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (401)
Q Consensus       209 ~~~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~  288 (401)
                      ..|...|+++++.++++++|||+++++......              +.+.........+++.+|+|++++.++..+...
T Consensus       159 ~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~--------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~  224 (251)
T PLN00141        159 VAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGN--------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESS  224 (251)
T ss_pred             HHHHHHHHHHHhcCCcEEEEECCCccCCCCCce--------------EEECCCCccccCcccHHHHHHHHHHHhcChhhc
Confidence            135566777888899999999999998642211              111111112235789999999999999887754


Q ss_pred             CCcEEEecC---CCCCCHHHHHHHHHH
Q 015746          289 SSNIFNLVS---DRAVTLDGMAKLCAQ  312 (401)
Q Consensus       289 ~g~~~~~~~---~~~~t~~el~~~i~~  312 (401)
                      + +++.+.+   +...++++++..+++
T Consensus       225 ~-~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        225 Y-KVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             C-cEEEEecCCCCCchhHHHHHHHhhc
Confidence            4 6777776   234788888887764

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.85  E-value=7.3e-20  Score=186.02  Aligned_cols=237  Identities=14%  Similarity=0.160  Sum_probs=159.6

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCC-------CC-CCc--------ccchhc
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKK-------PP-FNR--------FNEIVS  131 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~-------~~-~~~--------~~~l~~  131 (401)
                      ...+++||||    |||||||.+|+++|++.+.   +|+++.|..........       .+ +.+        +.....
T Consensus       116 f~~~k~VlVT----GaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~  191 (605)
T PLN02503        116 FLRGKNFLIT----GATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML  191 (605)
T ss_pred             hhcCCEEEEc----CCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence            4567999999    9999999999999998765   68999997654321110       00 000        111113


Q ss_pred             CCCeEEEcCH---------hhHHHhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhC-CCCEEEEeccc
Q 015746          132 AGGKTVWGDP---------AEVGNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSS-GVKQFLFISSA  188 (401)
Q Consensus       132 ~~~~~~~~D~---------~~~~~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~-gv~~~v~~SS~  188 (401)
                      .++.++.+|.         ++...+.++  +|+|||+|+.             |+.++.+++++|++. ++++|||+||.
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~--vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa  269 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIAKE--VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA  269 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHHhc--CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence            4688888882         234445544  6999999993             689999999999887 47899999999


Q ss_pred             ccccCCCCCCCCCCCCC----------------------------------------------------------CCCCC
Q 015746          189 GIYKPADEPPHVEGDVV----------------------------------------------------------KPDAG  210 (401)
Q Consensus       189 ~vy~~~~~~~~~E~~~~----------------------------------------------------------~~~~~  210 (401)
                      .|||...+ .+.|....                                                          ....+
T Consensus       270 yVyG~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN  348 (605)
T PLN02503        270 YVNGQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD  348 (605)
T ss_pred             eeecCCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC
Confidence            99987531 11111110                                                          00013


Q ss_pred             hHHHHHHHHH-----h--CCCeEEEecCeeec----------CCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          211 HVQVEKYISE-----N--FSNWASFRPQYMIG----------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       211 ~~~~ek~~~e-----~--g~~~~ilRp~~v~G----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                      .|...|.+.|     .  +++++|+||++|.+          ++... ..+. +..+.+|.--.++++++...++|+||.
T Consensus       349 tYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~-~~p~-~~~~g~G~lr~~~~~~~~~~DiVPVD~  426 (605)
T PLN02503        349 TYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRM-MDPI-VLYYGKGQLTGFLADPNGVLDVVPADM  426 (605)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccc-cchh-hhheeccceeEEEeCCCeeEeEEeecH
Confidence            3444444444     3  78999999999943          33211 1111 212223433347789999999999999


Q ss_pred             HHHHHHHHhcC-CCc--CCCcEEEecCC--CCCCHHHHHHHHHHHhCC
Q 015746          274 LSSMLTLAVEN-PEA--ASSNIFNLVSD--RAVTLDGMAKLCAQAAGL  316 (401)
Q Consensus       274 ~a~~~~~~~~~-~~~--~~g~~~~~~~~--~~~t~~el~~~i~~~~g~  316 (401)
                      ++.+++.++.. ...  ..+++||++++  +++++.|+.+.+.+.+..
T Consensus       427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            99999988432 211  12589999988  899999999999987753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.84  E-value=9.2e-20  Score=182.15  Aligned_cols=224  Identities=15%  Similarity=0.185  Sum_probs=147.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC-Cccc---chhcCCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFN---EIVSAGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~---~l~~~~~~~~~~D---~~~~  144 (401)
                      .++++||||    ||+|+||++++++|+++||+|++++|+.++...+..... ..+.   .....+++++.+|   .+++
T Consensus        78 ~~gKvVLVT----GATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI  153 (576)
T PLN03209         78 KDEDLAFVA----GATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI  153 (576)
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence            356789999    999999999999999999999999998865432211000 0000   0001246777777   5667


Q ss_pred             HHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      .+++.+.  |+|||++|.              |+.++.+++++|++.|++|||++||.+++........ ..........
T Consensus       154 ~~aLggi--DiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~-~~sk~~~~~~  230 (576)
T PLN03209        154 GPALGNA--SVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAI-LNLFWGVLCW  230 (576)
T ss_pred             HHHhcCC--CEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccc-hhhHHHHHHH
Confidence            7777765  999999884              3567899999999999999999999886421110000 0000001124


Q ss_pred             hHHHHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCC
Q 015746          211 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS  290 (401)
Q Consensus       211 ~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g  290 (401)
                      +..+|+++.+.|++|++||||+++++.+....         . ..+....++.....++..+|||++++.++.++....+
T Consensus       231 KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~---------t-~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~  300 (576)
T PLN03209        231 KRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------T-HNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYC  300 (576)
T ss_pred             HHHHHHHHHHcCCCEEEEECCeecCCcccccc---------c-cceeeccccccCCCccCHHHHHHHHHHHHcCchhccc
Confidence            56678888888999999999999987433110         0 0011111111112357899999999999998876556


Q ss_pred             cEEEecCCCCCCHHHHHHHHHH
Q 015746          291 NIFNLVSDRAVTLDGMAKLCAQ  312 (401)
Q Consensus       291 ~~~~~~~~~~~t~~el~~~i~~  312 (401)
                      ++|.+.++.......+.+++.+
T Consensus       301 kvvevi~~~~~p~~~~~~~~~~  322 (576)
T PLN03209        301 KVVEVIAETTAPLTPMEELLAK  322 (576)
T ss_pred             eEEEEEeCCCCCCCCHHHHHHh
Confidence            8999998764444555555544

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.82  E-value=5.7e-19  Score=199.87  Aligned_cols=241  Identities=17%  Similarity=0.232  Sum_probs=162.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC----CeEEEEecCCCCcccCCCCC-----CCcccchhcCCCeEEEcCH---
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPP-----FNRFNEIVSAGGKTVWGDP---  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g----~~V~~~~r~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~D~---  141 (401)
                      .++||||    |||||+|.+++++|++++    ++|+++.|............     ...+......+++++.+|.   
T Consensus       971 ~~~VlvT----GatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443       971 PITVFLT----GATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred             CceEEEe----CCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCc
Confidence            4789999    999999999999999987    78999999764332111000     0000011113577787772   


Q ss_pred             ------hhHHHhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC-------
Q 015746          142 ------AEVGNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-------  195 (401)
Q Consensus       142 ------~~~~~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~-------  195 (401)
                            +.+..+..+  +|+|||+|+.             |+.++.+++++|++.++++|+|+||.++|+...       
T Consensus      1047 ~lgl~~~~~~~l~~~--~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~ 1124 (1389)
T TIGR03443      1047 KFGLSDEKWSDLTNE--VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDE 1124 (1389)
T ss_pred             cCCcCHHHHHHHHhc--CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhh
Confidence                  345556555  5999999983             788999999999999999999999999996421       


Q ss_pred             -----CCCCCCCCCCC---------CCCChHHHHHHHHHh---CCCeEEEecCeeecCCCCCC-cHHHHHHHHHcC-CCc
Q 015746          196 -----EPPHVEGDVVK---------PDAGHVQVEKYISEN---FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRK-RPV  256 (401)
Q Consensus       196 -----~~~~~E~~~~~---------~~~~~~~~ek~~~e~---g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~-~~~  256 (401)
                           ...+.|+.+..         +..+|+.+|+++.+.   |++++++||+.|||+...+. ....++..++++ ...
T Consensus      1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred             hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence                 11233332211         223455555555443   89999999999999865432 112222233221 112


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEE
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV  321 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~  321 (401)
                      ..+.+....++|++++|++++++.++.++.. ..+.+||++++..+++.++++.+.+. |.+.+..
T Consensus      1205 ~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~ 1269 (1389)
T TIGR03443      1205 GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIV 1269 (1389)
T ss_pred             CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCcc
Confidence            2233444568999999999999999876643 22469999999899999999999764 6655543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.82  E-value=1.6e-18  Score=162.44  Aligned_cols=236  Identities=17%  Similarity=0.227  Sum_probs=160.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcc---cCCCC--CCCcccchhcCCCeEEEcC--------
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSD---KMKKP--PFNRFNEIVSAGGKTVWGD--------  140 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~---~~~~~--~~~~~~~l~~~~~~~~~~D--------  140 (401)
                      ++||+|    |||||+|.+++.+|+.+-. +|++++|..+.-.   ++.+.  ....|++....+++++.||        
T Consensus         1 ~~vlLT----GATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL   76 (382)
T COG3320           1 RNVLLT----GATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL   76 (382)
T ss_pred             CeEEEe----cCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence            579999    9999999999999998854 9999999886322   11111  1235667778899999998        


Q ss_pred             -HhhHHHhhcCCcccEEEeCCC-------------CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC--
Q 015746          141 -PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV--  204 (401)
Q Consensus       141 -~~~~~~~~~~~~~d~Vv~~a~-------------~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~--  204 (401)
                       ..++..+.+..  |.|||+++             .|+.++..+++.|.....|.|.|+||++|+........+++..  
T Consensus        77 ~~~~~~~La~~v--D~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          77 SERTWQELAENV--DLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             CHHHHHHHhhhc--ceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence             45677777765  99999998             3899999999999888888999999999987543322222211  


Q ss_pred             -----------CCCCCChHHHHHHHHHh---CCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcce
Q 015746          205 -----------VKPDAGHVQVEKYISEN---FSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       205 -----------~~~~~~~~~~ek~~~e~---g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                 ..+..+|+.+|+++++.   |++++|+|||+|.|+...+     +++..|+..++.-+.++-..   ..
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~---~~  231 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSE---YS  231 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcc---cc
Confidence                       23447888888888875   8999999999999986532     35556666665544433111   11


Q ss_pred             eeeee-----------HHHHHHHHHHHhcCCCcCCCcEEE-ecCCCCCCHHHHHHHHHH--HhCCCceE
Q 015746          266 TNIAH-----------VRDLSSMLTLAVENPEAASSNIFN-LVSDRAVTLDGMAKLCAQ--AAGLPVEI  320 (401)
Q Consensus       266 ~~~v~-----------v~D~a~~~~~~~~~~~~~~g~~~~-~~~~~~~t~~el~~~i~~--~~g~~~~~  320 (401)
                      .+.+.           +.-+++.+..+..++...- ..|+ ..-|..+.+.++.+.+.+  ..+.+...
T Consensus       232 ~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f-~~~~~~~~~~~i~l~~~~~w~~~~~~a~~~~~~  299 (382)
T COG3320         232 LDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRF-NQLHMLTHPDEIGLDEYVDWLISLDIAGYPEWL  299 (382)
T ss_pred             hhhCccceeeEEeehhhhhHHHHHHHhccCccchh-hheecccCCCccchhHHHHhHhhhhccCCchhh
Confidence            22222           2223333333333333222 2333 333788999999999998  55554433

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.80  E-value=9.1e-20  Score=168.58  Aligned_cols=193  Identities=17%  Similarity=0.241  Sum_probs=109.4

Q ss_pred             EEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcc---cCCCC-CCCc-ccch---hcCCCeEEEcC--------
Q 015746           79 IVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSD---KMKKP-PFNR-FNEI---VSAGGKTVWGD--------  140 (401)
Q Consensus        79 Vt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~---~~~~~-~~~~-~~~l---~~~~~~~~~~D--------  140 (401)
                      ||    |||||+|++|+++|++++.  +|+++.|......   ++... .... +...   ...+++++.||        
T Consensus         1 lT----GaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL   76 (249)
T PF07993_consen    1 LT----GATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGL   76 (249)
T ss_dssp             EE-----TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG-
T ss_pred             Cc----CCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCC
Confidence            79    9999999999999999987  8999999874422   11110 0001 1111   25699999999        


Q ss_pred             -HhhHHHhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC-----
Q 015746          141 -PAEVGNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE-----  201 (401)
Q Consensus       141 -~~~~~~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E-----  201 (401)
                       .+++..+.+.  +|+|||+|+.             |+.+++++++.|.+.+.++|+|+||..+.+.... ...|     
T Consensus        77 ~~~~~~~L~~~--v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~  153 (249)
T PF07993_consen   77 SDEDYQELAEE--VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPE  153 (249)
T ss_dssp             -HHHHHHHHHH----EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HH
T ss_pred             ChHHhhccccc--cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-ccccccccc
Confidence             3556666665  5999999993             7999999999999877779999999555554332 1111     


Q ss_pred             --CC--CCC-----CCCChHHHHHHHHHh----CCCeEEEecCeeecCCCC-----CCcHHH-HHHHHHcCCCcccCCCC
Q 015746          202 --GD--VVK-----PDAGHVQVEKYISEN----FSNWASFRPQYMIGSGNN-----KDCEEW-FFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       202 --~~--~~~-----~~~~~~~~ek~~~e~----g~~~~ilRp~~v~G~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~  262 (401)
                        ..  ...     +..+|+.+|+++.+.    |++++|+||+.|+|....     .+.... +...+..+......++.
T Consensus       154 ~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~  233 (249)
T PF07993_consen  154 EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDP  233 (249)
T ss_dssp             H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB--
T ss_pred             ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCC
Confidence              11  111     113455555555443    899999999999994322     222333 33344445544566766


Q ss_pred             cceeeeeeHHHHHHHH
Q 015746          263 MQFTNIAHVRDLSSML  278 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~  278 (401)
                      ....+++.|+.+|++|
T Consensus       234 ~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  234 DARLDLVPVDYVARAI  249 (249)
T ss_dssp             -TT--EEEHHHHHHHH
T ss_pred             CceEeEECHHHHHhhC
Confidence            6779999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.79  E-value=1.1e-17  Score=145.52  Aligned_cols=281  Identities=13%  Similarity=0.064  Sum_probs=196.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ....+||||    ||-|.+|..+++.|..+ |-+-++++.-....+.+...+.         -+.....|...+.+++.+
T Consensus        42 ~~~PrvLIT----G~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GP---------yIy~DILD~K~L~eIVVn  108 (366)
T KOG2774|consen   42 QKAPRVLIT----GSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGP---------YIYLDILDQKSLEEIVVN  108 (366)
T ss_pred             CCCCeEEEe----cchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCC---------chhhhhhccccHHHhhcc
Confidence            344689999    99999999999999877 6554444432222222222211         122223368889999999


Q ss_pred             CcccEEEeCCC---------------CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHH
Q 015746          151 VTFDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (401)
Q Consensus       151 ~~~d~Vv~~a~---------------~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~e  215 (401)
                      .++|++||+.+               .|+.+..|+++.|++.+. ++..-|++++||+.....-+.+-....++.-|+++
T Consensus       109 ~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVS  187 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVS  187 (366)
T ss_pred             cccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechh
Confidence            89999999765               489999999999999998 47778999999986543333343334445788888


Q ss_pred             HHHHHh---------CCCeEEEecCeeecCC---CC-CCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHh
Q 015746          216 KYISEN---------FSNWASFRPQYMIGSG---NN-KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (401)
Q Consensus       216 k~~~e~---------g~~~~ilRp~~v~G~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~  282 (401)
                      |..+|.         |+.+..+|.+.++...   ++ .++....+..+++++....+-.++.+...++.+||-++++.++
T Consensus       188 KVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~  267 (366)
T KOG2774|consen  188 KVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLL  267 (366)
T ss_pred             HHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHH
Confidence            877763         7889999988887642   21 2234444555555555677777888899999999999999999


Q ss_pred             cCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHh-CCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC
Q 015746          283 ENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAA-GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT  360 (401)
Q Consensus       283 ~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~  360 (401)
                      ..+.. -..++||+++- .+|..|+++.+.+.+ |.++.+..  ..  .......||+     .+|.+.+++++-|+-.+
T Consensus       268 ~a~~~~lkrr~ynvt~~-sftpee~~~~~~~~~p~~~i~y~~--~s--rq~iad~wp~-----~~dds~ar~~wh~~h~~  337 (366)
T KOG2774|consen  268 AADSQSLKRRTYNVTGF-SFTPEEIADAIRRVMPGFEIDYDI--CT--RQSIADSWPM-----SLDDSEARTEWHEKHSL  337 (366)
T ss_pred             hCCHHHhhhheeeecee-ccCHHHHHHHHHhhCCCceeeccc--ch--hhhhhhhccc-----ccCchhHhhHHHHhhhh
Confidence            87765 23489999964 699999999999988 44443321  11  1112334443     37778888888888887


Q ss_pred             CHHHHHHHHHHHHHHh
Q 015746          361 NLPEDLKERFEEYVKI  376 (401)
Q Consensus       361 ~l~e~l~~~~~~~~~~  376 (401)
                      .+...+.-++..-+++
T Consensus       338 ~l~~~i~~~i~~~~~n  353 (366)
T KOG2774|consen  338 HLLSIISTVVAVHKSN  353 (366)
T ss_pred             hHHHHHHHHHHHHHhh
Confidence            7777776666655544

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.77  E-value=5.1e-18  Score=146.86  Aligned_cols=265  Identities=16%  Similarity=0.139  Sum_probs=181.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHH-----HHHhCC----CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAK-----ELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE  143 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~-----~Ll~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~  143 (401)
                      +.++.++-    +++|+|+..|..     ++-..+    |+|++++|.+.+.+-       .|+++..+++..       
T Consensus        11 ~sr~a~~~----~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri-------tw~el~~~Gip~-------   72 (315)
T KOG3019|consen   11 KSRDAVSN----WSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI-------TWPELDFPGIPI-------   72 (315)
T ss_pred             ccccCCCC----ccccchhccccCcccccccCCCCcccccceEEEecCCCCccc-------ccchhcCCCCce-------
Confidence            34566777    999999988877     555544    999999999866532       455665555542       


Q ss_pred             HHHhhcCCcccEEEeCCCC--------------------ChhhHHHHHHHHHhCC--CCEEEEecccccccCCCCCCCCC
Q 015746          144 VGNVVGGVTFDVVLDNNGK--------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                            .  ++++++.++.                    -+..++.++++..++.  .+.+|++|..++|-+.+...|+|
T Consensus        73 ------s--c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e  144 (315)
T KOG3019|consen   73 ------S--CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSE  144 (315)
T ss_pred             ------e--hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccc
Confidence                  1  1333333331                    2567889999998884  35799999999999988888888


Q ss_pred             CCCCCCCC-ChHHH---HHHHHH--hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          202 GDVVKPDA-GHVQV---EKYISE--NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       202 ~~~~~~~~-~~~~~---ek~~~e--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                      ++...... -...+   |..+..  ...+.++||.|.|.|.+...-..-.+.=++-.|+|+   |+|.|+++|||++|++
T Consensus       145 ~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~  221 (315)
T KOG3019|consen  145 KIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLV  221 (315)
T ss_pred             ccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHH
Confidence            87654310 00111   111111  257899999999999976542111112244556765   8899999999999999


Q ss_pred             HHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccccccc-ccCCCccceEeechHHHHHhc
Q 015746          276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK-KAFPFRNMHFYAEPRAAKDIL  354 (401)
Q Consensus       276 ~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~l  354 (401)
                      ..+..+++++.-.  +++|-+.+++++..|+++.+.++++++..+ .+|+.....-.. +..........+-+.|+.+ +
T Consensus       222 ~li~~ale~~~v~--GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~-pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~-~  297 (315)
T KOG3019|consen  222 NLIYEALENPSVK--GVINGVAPNPVRNGEFCQQLGSALSRPSWL-PVPDFVVQALFGPERATVVLEGQKVLPQRALE-L  297 (315)
T ss_pred             HHHHHHHhcCCCC--ceecccCCCccchHHHHHHHHHHhCCCccc-CCcHHHHHHHhCccceeEEeeCCcccchhHhh-c
Confidence            9999999998874  599999999999999999999999988754 454432221111 1111122333445677765 8


Q ss_pred             CCCCCC-CHHHHHHHHH
Q 015746          355 GWRSTT-NLPEDLKERF  370 (401)
Q Consensus       355 G~~p~~-~l~e~l~~~~  370 (401)
                      ||+.++ .+.++++++.
T Consensus       298 Gf~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  298 GFEFKYPYVKDALRAIM  314 (315)
T ss_pred             CceeechHHHHHHHHHh
Confidence            999887 7888888764

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.2e-17  Score=154.86  Aligned_cols=211  Identities=19%  Similarity=0.162  Sum_probs=139.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      .|+||||    ||+|+||++++++|+++|++|+++.|+.+....+..        ....++.++.+|   .+++.+++..
T Consensus         2 ~k~vlVt----Gasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~   69 (276)
T PRK06482          2 SKTWFIT----GASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA--------RYGDRLWVLQLDVTDSAAVRAVVDR   69 (276)
T ss_pred             CCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hccCceEEEEccCCCHHHHHHHHHH
Confidence            4789999    999999999999999999999999998754332211        111256666776   5555555432


Q ss_pred             -----CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 -----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 -----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                           .++|+|||++|.                    |+.++.++++++    ++.+.++||++||.........     
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  144 (276)
T PRK06482         70 AFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG-----  144 (276)
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCC-----
Confidence                 247999999983                    567777888876    6667789999999764322100     


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCee---ecCCCCCC---------cHHHHHHHHHcCCCcccCCCC
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYM---IGSGNNKD---------CEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v---~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  262 (401)
                        ...+..+|.+.+.++..       +|++++++|||.+   ||++....         .... +.+....+.+.+    
T Consensus       145 --~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----  217 (276)
T PRK06482        145 --FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGD-LRRALADGSFAI----  217 (276)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHH-HHHHHhhccCCC----
Confidence              01111234433333322       3899999999988   55432210         1112 222222232222    


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g  315 (401)
                           +.+++|++++++.++..+..  +..||+++++..+..|+++.+.+.++
T Consensus       218 -----~~d~~~~~~a~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        218 -----PGDPQKMVQAMIASADQTPA--PRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             -----CCCHHHHHHHHHHHHcCCCC--CeEEecChHHHHHHHHHHHHHHHHHH
Confidence                 24789999999999986654  46899999988888888888877764

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.3e-16  Score=149.15  Aligned_cols=212  Identities=25%  Similarity=0.283  Sum_probs=162.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||||++|++++++|+++||+|++++|+++....+.            .++++..+|   +..+...+.+.
T Consensus         1 ~~ilV~----GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~G~   64 (275)
T COG0702           1 MKILVT----GATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAKGV   64 (275)
T ss_pred             CeEEEE----ecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhccc
Confidence            689999    99999999999999999999999999997765432            478888887   77777777776


Q ss_pred             cccEEEeCCCC-------ChhhHHHHHHHHHhCC--CCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhC
Q 015746          152 TFDVVLDNNGK-------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF  222 (401)
Q Consensus       152 ~~d~Vv~~a~~-------~~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g  222 (401)
                        |.++++.+.       ......++++.++..+  +++++++|..+......         ..+...+..+|+.+.+.|
T Consensus        65 --~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~---------~~~~~~~~~~e~~l~~sg  133 (275)
T COG0702          65 --DGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASP---------SALARAKAAVEAALRSSG  133 (275)
T ss_pred             --cEEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCc---------cHHHHHHHHHHHHHHhcC
Confidence              888877662       2344556666666655  77899999866543221         112237888999999999


Q ss_pred             CCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCC
Q 015746          223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (401)
Q Consensus       223 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t  302 (401)
                      ++++++|+..+|.......    .......+.+....+.+  ...++..+|++.++..++..+... +++|.+++++..+
T Consensus       134 ~~~t~lr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~-~~~~~l~g~~~~~  206 (275)
T COG0702         134 IPYTTLRRAAFYLGAGAAF----IEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATA-GRTYELAGPEALT  206 (275)
T ss_pred             CCeEEEecCeeeeccchhH----HHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCccc-CcEEEccCCceec
Confidence            9999999777766543221    12333444444444444  688999999999999999988744 5999999999999


Q ss_pred             HHHHHHHHHHHhCCCceE
Q 015746          303 LDGMAKLCAQAAGLPVEI  320 (401)
Q Consensus       303 ~~el~~~i~~~~g~~~~~  320 (401)
                      ..|+++.+.+..|++...
T Consensus       207 ~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         207 LAELASGLDYTIGRPVGL  224 (275)
T ss_pred             HHHHHHHHHHHhCCccee
Confidence            999999999999999887

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.75  E-value=7.1e-17  Score=154.65  Aligned_cols=228  Identities=18%  Similarity=0.213  Sum_probs=146.8

Q ss_pred             cccccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----Hhh
Q 015746           68 KASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAE  143 (401)
Q Consensus        68 ~~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~  143 (401)
                      .....+++.|||+    ||||.+|+.|++.|+++|+.|+++.|+.++..++..      -...+.+...+..+    .+.
T Consensus        73 ~~~~~~~~~VlVv----GatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~------~~~~d~~~~~v~~~~~~~~d~  142 (411)
T KOG1203|consen   73 NNNSKKPTTVLVV----GATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG------VFFVDLGLQNVEADVVTAIDI  142 (411)
T ss_pred             CCCCCCCCeEEEe----cCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc------ccccccccceeeeccccccch
Confidence            3444567899999    999999999999999999999999999987765433      01122344444444    344


Q ss_pred             HHHhhcCCc--ccEEEeCCC-------------CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC
Q 015746          144 VGNVVGGVT--FDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (401)
Q Consensus       144 ~~~~~~~~~--~d~Vv~~a~-------------~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~  208 (401)
                      +..+.+...  ..+++-+++             +++.+++|+++||+.+|++|||++|+++.-......+.... .....
T Consensus       143 ~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~-~~~~~  221 (411)
T KOG1203|consen  143 LKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLL-NGLVL  221 (411)
T ss_pred             hhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhh-hhhhh
Confidence            444444431  234554444             36899999999999999999999999876544433222221 11112


Q ss_pred             CChHHHHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcC
Q 015746          209 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (401)
Q Consensus       209 ~~~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~  288 (401)
                      ..|+.+|+++.+.|++++|||++...-......      .......+....+++.  --.+...|+|+.++.++.++...
T Consensus       222 ~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~i~r~~vael~~~all~~~~~  293 (411)
T KOG1203|consen  222 KAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQR------EVVVDDEKELLTVDGG--AYSISRLDVAELVAKALLNEAAT  293 (411)
T ss_pred             HHHHhHHHHHHhcCCCcEEEeccccccCCCCcc------eecccCcccccccccc--ceeeehhhHHHHHHHHHhhhhhc
Confidence            367889999999999999999998766433221      1111122222222221  13678999999999999988875


Q ss_pred             CCcEEEecCCCCCCHHHHHHHHHHHhC
Q 015746          289 SSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (401)
Q Consensus       289 ~g~~~~~~~~~~~t~~el~~~i~~~~g  315 (401)
                      ..++.+++. .+-......+.+.+...
T Consensus       294 ~~k~~~~v~-~~~gpg~~~~~l~~~~~  319 (411)
T KOG1203|consen  294 FKKVVELVL-KPEGPGRPYKVLLELFP  319 (411)
T ss_pred             cceeEEeec-CCCCCCccHHHHHhhcc
Confidence            434555443 22333344444444443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=148.00  Aligned_cols=206  Identities=14%  Similarity=0.139  Sum_probs=133.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|++++......    .+... ...+.++.+|   .+.+.+++.
T Consensus         6 ~~~~vlIt----Gasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   76 (262)
T PRK13394          6 NGKTAVVT----GAASGIGKEIALELARAGAAVAIADLNQDGANAVAD----EINKA-GGKAIGVAMDVTNEDAVNAGID   76 (262)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH----HHHhc-CceEEEEECCCCCHHHHHHHHH
Confidence            46889999    999999999999999999999999998754432111    01110 1235566676   555555544


Q ss_pred             CC-----cccEEEeCCCC--------------------Chhh----HHHHHHHH-HhCCCCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWA-KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa-~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|+|||+++.                    |+.+    +.++++++ ++.+.++||++||...+....   .
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~---~  153 (262)
T PRK13394         77 KVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASP---L  153 (262)
T ss_pred             HHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCC---C
Confidence            32     37999999984                    3334    66778888 777788999999965543211   0


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCC-------CcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-------PVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  265 (401)
                          ...+..+|.+.+.+++.       .+++++++||+.++++.....     +.......       ...+++.+...
T Consensus       154 ----~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T PRK13394        154 ----KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ-----IPEQAKELGISEEEVVKKVMLGKTVD  224 (262)
T ss_pred             ----CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh-----hHhhhhccCCChHHHHHHHHhcCCCC
Confidence                01122345554443322       378999999999998853211     11111100       00122334455


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+|++++|++++++.++..... .+|+.|+++++.
T Consensus       225 ~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        225 GVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            7899999999999999986543 457899999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=1.6e-16  Score=146.09  Aligned_cols=205  Identities=14%  Similarity=0.123  Sum_probs=129.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++||+|+++.|...........   ... ....++.++.+|   .+++.+++
T Consensus         4 ~~~~~vlIt----Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~D~~~~~~v~~~~   75 (249)
T PRK12825          4 LMGRVALVT----GAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVE---AVE-ALGRRAQAVQADVTDKAALEAAV   75 (249)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH---HHH-hcCCceEEEECCcCCHHHHHHHH
Confidence            346799999    9999999999999999999998877765432110000   000 011346677777   55666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ++.     ++|+|||+++.                    |+.+..++++.+    ++.+.++||++||...+.....   
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~---  152 (249)
T PRK12825         76 AAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG---  152 (249)
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC---
Confidence            432     47999999983                    344455555555    5677889999999887643211   


Q ss_pred             CCCCCCCCCCChHHHHHHH-------HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~-------~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          ...+..+|.+.+.++       .+.+++++++||+.++++.............    .+.      .....+++++
T Consensus       153 ----~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~----~~~------~~~~~~~~~~  218 (249)
T PRK12825        153 ----RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK----DAE------TPLGRSGTPE  218 (249)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh----hcc------CCCCCCcCHH
Confidence                001112333332222       1248999999999999986543221111111    110      0112378999


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      |+++++..++++... ..|++|+++++..+
T Consensus       219 dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        219 DIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            999999999977543 45799999988643

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.3e-16  Score=146.28  Aligned_cols=211  Identities=15%  Similarity=0.144  Sum_probs=139.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ++++|||    ||+|+||+.++++|+++|++|++++|+.++...+.       ..+...+++++.+|   .+++..++..
T Consensus         2 ~k~ilIt----Gat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (257)
T PRK07074          2 KRTALVT----GAAGGIGQALARRFLAAGDRVLALDIDAAALAAFA-------DALGDARFVPVACDLTDAASLAAALAN   70 (257)
T ss_pred             CCEEEEE----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4689999    99999999999999999999999999875432211       11111245666666   5666555543


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .     ++|+|||+++.                    |+.+..++++++    ++.+.++||++||...+....      
T Consensus        71 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------  144 (257)
T PRK07074         71 AAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALG------  144 (257)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCC------
Confidence            2     47999999983                    334444455544    455667899999965432111      


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                        ...+..+|.+.+.+++.       .+++++++|||+++++.....  ....+.......         ....+|++++
T Consensus       145 --~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  213 (257)
T PRK07074        145 --HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATPD  213 (257)
T ss_pred             --CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCHH
Confidence              11223356555544433       278999999999988743211  001112222111         1235789999


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHH
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQ  312 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~  312 (401)
                      |++++++.++.+... ..|+++++.++......||++.+.+
T Consensus       214 d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        214 DVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            999999999976433 4479999999999999999988765

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.71  E-value=1.4e-16  Score=147.53  Aligned_cols=203  Identities=13%  Similarity=0.130  Sum_probs=131.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++.....       .++.  ..++.++.+|   .+++.++
T Consensus         3 ~~~~vlIt----G~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~   71 (258)
T PRK12429          3 KGKVALVT----GAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-------EALQKAGGKAIGVAMDVTDEEAINAG   71 (258)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            35789999    99999999999999999999999999876543211       1111  1345666776   5666555


Q ss_pred             hcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     .+|+|||+++.                    |+.+    +..+++++++.+.++||++||...+.....  
T Consensus        72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--  149 (258)
T PRK12429         72 IDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG--  149 (258)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC--
Confidence            5432     47999999983                    3344    666777777778889999999765533211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc--CCCc-----ccCCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPV-----PIPGSGMQ  264 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~  264 (401)
                           ...+..+|.+.+.+.+    +   .++.++++||+.++++.....     +.....  +.+.     ..++....
T Consensus       150 -----~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  219 (258)
T PRK12429        150 -----KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVP  219 (258)
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCC
Confidence                 0111124444333222    1   378899999999998753221     111111  1110     11222333


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      .+.+++++|+|+++..++..... .+|+.|++.++
T Consensus       220 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        220 QKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             ccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            46799999999999999876543 45689999876

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.71  E-value=2e-16  Score=146.33  Aligned_cols=206  Identities=15%  Similarity=0.181  Sum_probs=129.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+....+..    .+.. ...++.++.+|   .+++..+++.
T Consensus         1 ~~~vlIt----Ga~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~   71 (255)
T TIGR01963         1 GKTALVT----GAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAK----VATD-AGGSVIYLVADVTKEDEIADMIAA   71 (255)
T ss_pred             CCEEEEc----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCceEEEECCCCCHHHHHHHHHH
Confidence            3689999    999999999999999999999999998754332110    0000 01246666676   5544444332


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .     .+|+|||+++.                    |+.++..+++    .+++.++++||++||...+.....     
T Consensus        72 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~-----  146 (255)
T TIGR01963        72 AAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF-----  146 (255)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC-----
Confidence            1     37999999984                    3334344444    446677889999999766543211     


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcc-------cCCCCcceee
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP-------IPGSGMQFTN  267 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  267 (401)
                        ...+..+|.+.+.+.+.       .+++++++||+.++++....     .+..........       ....+.+.++
T Consensus       147 --~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T TIGR01963       147 --KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK-----QIADQAKTRGIPEEQVIREVMLPGQPTKR  219 (255)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH-----HHHhhhcccCCCchHHHHHHHHccCcccc
Confidence              01122345444433322       38899999999999874211     111111111110       1122445578


Q ss_pred             eeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~  300 (401)
                      +++++|+|++++.++++.. ..+|++|+++++..
T Consensus       220 ~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       220 FVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             CcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            9999999999999998753 33568999998753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.71  E-value=3.6e-16  Score=144.15  Aligned_cols=201  Identities=14%  Similarity=0.179  Sum_probs=128.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.++.....       ..+.  ...+.++.+|   .+++.++
T Consensus         5 ~~~~ilIt----Gasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~~   73 (251)
T PRK12826          5 EGRVALVT----GAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-------ELVEAAGGKARARQVDVRDRAALKAA   73 (251)
T ss_pred             CCCEEEEc----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            45789999    99999999999999999999999999864332111       1111  1235666666   6666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+++.                    |+.++.++++++    ++.+.++||++||...+....  +
T Consensus        74 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~--~  151 (251)
T PRK12826         74 VAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY--P  151 (251)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC--C
Confidence            6532     47999999973                    344455666655    455677999999987762110  0


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                          ....+..+|.+++.++..       .+++++++||+.++|+.........+...+....++         ..++++
T Consensus       152 ----~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  218 (251)
T PRK12826        152 ----GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEP  218 (251)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCH
Confidence                001111234333333322       388999999999999854321111111222222222         246799


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|+|+++..++..... .+|++|++.+|.
T Consensus       219 ~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        219 EDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            9999999998876553 357999998765

>PRK09135 pteridine reductase; Provisional

Probab=99.70  E-value=4.6e-16  Score=143.28  Aligned_cols=206  Identities=17%  Similarity=0.217  Sum_probs=127.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +.++||||    ||+|+||++++++|+++|++|++++|+.... ..+..    .+.......+.++.+|   .+.+..++
T Consensus         5 ~~~~vlIt----Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~   76 (249)
T PRK09135          5 SAKVALIT----GGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAA----ELNALRPGSAAALQADLLDPDALPELV   76 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHhhcCCceEEEEcCCCCHHHHHHHH
Confidence            34789999    9999999999999999999999999875321 11100    0111111245667777   55566665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +..     ++|+|||+++.                    |+.++.++++++...   .-..++.+++.....     +..
T Consensus        77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  151 (249)
T PRK09135         77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAER-----PLK  151 (249)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcC-----CCC
Confidence            532     47999999983                    577788898888642   123566666533211     110


Q ss_pred             CCCCCCCCCChHHHHHHHHH----h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          201 EGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e----~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                        ....+..+|++++.++..    +  +++++++||+.++|+.....+...+......+.+....         .+++|+
T Consensus       152 --~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~d~  220 (249)
T PRK09135        152 --GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRI---------GTPEDI  220 (249)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCC---------cCHHHH
Confidence              001122345555544433    2  58899999999999976433222222333333332222         258999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecCCCCCC
Q 015746          275 SSMLTLAVENPEAASSNIFNLVSDRAVT  302 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~~~~~t  302 (401)
                      ++++..++......+|++||+++++.++
T Consensus       221 a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        221 AEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             HHHHHHHcCccccccCcEEEECCCeecc
Confidence            9999776655443457999999987654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.69  E-value=9.4e-16  Score=143.80  Aligned_cols=221  Identities=16%  Similarity=0.188  Sum_probs=140.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~  147 (401)
                      +++++||||    ||+|+||+++++.|+++|++|++++|+.++......    .+.... ..++.++.+|   .+++.++
T Consensus         5 ~~~k~vlIt----Gasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (276)
T PRK05875          5 FQDRTYLVT----GGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAE----EIEALKGAGAVRYEPADVTDEDQVARA   76 (276)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----HHHhccCCCceEEEEcCCCCHHHHHHH
Confidence            446899999    999999999999999999999999998654322111    000000 1245666666   5566665


Q ss_pred             hcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|+|||+++.                     |+.+..++++++.+    .+..+||++||...+..... 
T Consensus        77 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-  155 (276)
T PRK05875         77 VDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW-  155 (276)
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC-
Confidence            5532     47999999973                     34455556554433    34458999999887643211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            ...+..+|.+.+.+++..       +++++++|||.+.++...... .......+....+.         ..+.
T Consensus       156 ------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~  220 (276)
T PRK05875        156 ------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPL---------PRVG  220 (276)
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCC---------CCCc
Confidence                  011223555555544432       688999999998776432110 01111122222221         2356


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC----CHHHHHHHHHHHhCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV----TLDGMAKLCAQAAGL  316 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~----t~~el~~~i~~~~g~  316 (401)
                      +++|++++++.+++++.. ..|+++++.+++.+    +..|+++.+.+..|.
T Consensus       221 ~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        221 EVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            799999999999987654 34699999998876    778888777766544

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6e-16  Score=141.50  Aligned_cols=192  Identities=16%  Similarity=0.192  Sum_probs=126.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+..+....       ..++...+++.+.+|   .+++.++++
T Consensus         6 ~~k~vlIt----Gatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (239)
T PRK12828          6 QGKVVAIT----GGFGGLGRATAAWLAARGARVALIGRGAAPLSQT-------LPGVPADALRIGGIDLVDPQAARRAVD   74 (239)
T ss_pred             CCCEEEEE----CCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHH-------HHHHhhcCceEEEeecCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999977543211       111222244555555   555655554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+++.                    |+.++.++++++    ++.+.++||++||...++.....   
T Consensus        75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  151 (239)
T PRK12828         75 EVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGM---  151 (239)
T ss_pred             HHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCc---
Confidence            32     47999999883                    334455666655    45577899999998877543110   


Q ss_pred             CCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ..+..+|.+.+.++.       +.++++.++|||+++++.....            .+    .  .....+++++|
T Consensus       152 ----~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------~~----~--~~~~~~~~~~d  209 (239)
T PRK12828        152 ----GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------MP----D--ADFSRWVTPEQ  209 (239)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------CC----c--hhhhcCCCHHH
Confidence                011123433333332       2489999999999998732110            00    0  01123789999


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +|+++..++.+... ..|+.+++.+++.
T Consensus       210 va~~~~~~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        210 IAAVIAFLLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HHHHHHHHhCcccccccceEEEecCCEe
Confidence            99999999987643 3468999988763

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9e-16  Score=143.93  Aligned_cols=212  Identities=14%  Similarity=0.071  Sum_probs=135.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.++...+..        .....+..+.+|   .+++..+++
T Consensus         2 ~~k~vlIt----Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~   69 (275)
T PRK08263          2 MEKVWFIT----GASRGFGRAWTEAALERGDRVVATARDTATLADLAE--------KYGDRLLPLALDVTDRAAVFAAVE   69 (275)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hccCCeeEEEccCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998754332111        111234555565   556555554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||++|.                    |+.++.++++    .+++.+.+++|++||...+.....    
T Consensus        70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----  145 (275)
T PRK08263         70 TAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM----  145 (275)
T ss_pred             HHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC----
Confidence            32     47999999984                    3444444444    456677789999999877654321    


Q ss_pred             CCCCCCCCCChHHHHHHH---------H---HhCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccCCCCc
Q 015746          201 EGDVVKPDAGHVQVEKYI---------S---ENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~---------~---e~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                              ...|+..|..         .   ..|++++++|||.+..+.....     .... ...+...     ..+..
T Consensus       146 --------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~  211 (275)
T PRK08263        146 --------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA-YDTLREE-----LAEQW  211 (275)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchh-hhhHHHH-----HHHHH
Confidence                    1344444432         1   2489999999999877543110     0000 1111000     00001


Q ss_pred             ceeee-eeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhC
Q 015746          264 QFTNI-AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (401)
Q Consensus       264 ~~~~~-v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g  315 (401)
                      ....+ ++++|++++++.+++.+...+ +.++..+++.+++.++.+.+.+..+
T Consensus       212 ~~~~~~~~p~dva~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  263 (275)
T PRK08263        212 SERSVDGDPEAAAEALLKLVDAENPPL-RLFLGSGVLDLAKADYERRLATWEE  263 (275)
T ss_pred             HhccCCCCHHHHHHHHHHHHcCCCCCe-EEEeCchHHHHHHHHHHHHHHHHHH
Confidence            11234 789999999999999876543 5565555678999999999988643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.68  E-value=2.5e-15  Score=139.55  Aligned_cols=198  Identities=14%  Similarity=0.118  Sum_probs=128.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .+++++|||    ||+|+||++++++|+++|++|++++|+... ..+       ..++.  ...+.++.+|   .+++.+
T Consensus         6 ~~~k~vlVt----Gas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   73 (260)
T PRK12823          6 FAGKVVVVT----GAAQGIGRGVALRAAAEGARVVLVDRSELV-HEV-------AAELRAAGGEALALTADLETYAGAQA   73 (260)
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHH-------HHHHHhcCCeEEEEEEeCCCHHHHHH
Confidence            446899999    999999999999999999999999987421 110       01111  1134455555   555555


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|++||+||.                     |+    ..++.++..+++.+..+||++||...++... 
T Consensus        74 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-  152 (260)
T PRK12823         74 AMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINR-  152 (260)
T ss_pred             HHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCC-
Confidence            54431     47999999973                     11    2334666777677767899999988764211 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCC------------CCcHHHHHHHHHcCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNN------------KDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~------------~~~~~~~~~~~~~~~~~~  257 (401)
                              ..+..+|.+.+.+.+.       .++++++|+||+++++...            ......++..+..+.++.
T Consensus       153 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T PRK12823        153 --------VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK  224 (260)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence                    1133456555443332       2899999999999997310            011223344444444443


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+         .+++|+|++++.++.+... ..|+++++.+++
T Consensus       225 ~~---------~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        225 RY---------GTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             cC---------CCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            33         3689999999998876543 457999998875

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2e-15  Score=139.26  Aligned_cols=199  Identities=17%  Similarity=0.226  Sum_probs=132.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....+.       +++.  ...+.++.+|   .+++..+
T Consensus         5 ~~k~vlIt----Gasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (250)
T PRK07774          5 DDKVAIVT----GAAGGIGQAYAEALAREGASVVVADINAEGAERVA-------KQIVADGGTAIAVQVDVSDPDSAKAM   73 (250)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            45889999    99999999999999999999999999865432211       1111  1134556666   5555554


Q ss_pred             hcCC-----cccEEEeCCCC-----------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCC
Q 015746          148 VGGV-----TFDVVLDNNGK-----------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~-----------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~  195 (401)
                      +...     ++|+|||++|.                       |+.++.++++++..    .+.++||++||...|....
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  153 (250)
T PRK07774         74 ADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSN  153 (250)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCcc
Confidence            4421     47999999983                       45566666666654    3456899999988775321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                                .+..+|.+.+.+++..       ++.+++++||.+..+.........+...+.++.+...         +
T Consensus       154 ----------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~  214 (250)
T PRK07774        154 ----------FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR---------M  214 (250)
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCC---------C
Confidence                      1223566655554432       6889999999998775433222233444444444322         3


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+++|++++++.++..... .+|++|++.+++.+
T Consensus       215 ~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        215 GTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             cCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            4689999999999887543 45799999988654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.65  E-value=1.3e-15  Score=141.29  Aligned_cols=206  Identities=17%  Similarity=0.176  Sum_probs=133.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||+++++.|+++|++|++++|+.+....+..       ++ ...+.++.+|   .+++..+++.
T Consensus         6 ~~~vlIt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~~   73 (257)
T PRK07067          6 GKVALLT----GAASGIGEAVAERYLAEGARVVIADIKPARARLAAL-------EI-GPAAIAVSLDVTRQDSIDRIVAA   73 (257)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-------Hh-CCceEEEEccCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998765433211       11 1235566666   5666665553


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----C-CCEEEEecccc-cccCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----G-VKQFLFISSAG-IYKPADEPPH  199 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----g-v~~~v~~SS~~-vy~~~~~~~~  199 (401)
                      .     ++|+|||+++.                    |+.+..++++++...    + -.+||++||.. .++...    
T Consensus        74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  149 (257)
T PRK07067         74 AVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL----  149 (257)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC----
Confidence            2     47999999983                    556777777777542    1 24799999964 333211    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc---CCCcccCCCCcceeeee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---KRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v  269 (401)
                          ...+..+|.+.+.+.+.       .++++++|+||.++++.....  ..++.....   +.....++++.....+.
T Consensus       150 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T PRK07067        150 ----VSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV--DALFARYENRPPGEKKRLVGEAVPLGRMG  223 (257)
T ss_pred             ----CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh--hhhhhhccCCCHHHHHHHHhhcCCCCCcc
Confidence                11223456554444332       488999999999999742210  001111100   00111223344456788


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      +++|+|++++.++..... ..|++|++.+|+.+
T Consensus       224 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        224 VPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            999999999999987644 45799999988754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.65  E-value=6.1e-15  Score=135.32  Aligned_cols=199  Identities=15%  Similarity=0.192  Sum_probs=127.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|++.+...+.       .++.  ...+.++.+|   ++++.++
T Consensus         4 ~~~~ilIt----Gasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T PRK05653          4 QGKTALVT----GASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-------AELRAAGGEARVLVFDVSDEAAVRAL   72 (246)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHHH
Confidence            35789999    99999999999999999999999999875432211       1111  1245566666   5556555


Q ss_pred             hcC-----CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +++     ..+|+|||+++.                    |+.+..++++++    ++.+.++||++||........  +
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~--~  150 (246)
T PRK05653         73 IEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP--G  150 (246)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC--C
Confidence            543     247999999974                    344555666655    456778999999975432111  0


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                           ...+..+|.+.+.+.+.       .++.++++||+.++++.... ....+........         ....++++
T Consensus       151 -----~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~  215 (246)
T PRK05653        151 -----QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKEI---------PLGRLGQP  215 (246)
T ss_pred             -----CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhcC---------CCCCCcCH
Confidence                 01112244433332222       37899999999999986432 1111111121111         12457889


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|+++++..++..... .+|++|++++|.
T Consensus       216 ~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        216 EEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            9999999999976443 357999999875

>PRK06194 hypothetical protein; Provisional

Probab=99.65  E-value=1.5e-15  Score=143.15  Aligned_cols=203  Identities=15%  Similarity=0.100  Sum_probs=130.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+......       .++.  ..++.++.+|   .+++.++
T Consensus         5 ~~k~vlVt----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~~~~~   73 (287)
T PRK06194          5 AGKVAVIT----GAASGFGLAFARIGAALGMKLVLADVQQDALDRAV-------AELRAQGAEVLGVRTDVSDAAQVEAL   73 (287)
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            45789999    99999999999999999999999999765433211       1111  1245567777   5666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCC------CEEEEeccccccc
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGV------KQFLFISSAGIYK  192 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv------~~~v~~SS~~vy~  192 (401)
                      ++..     ++|+|||+||.                    |+.++.+++++    +.+.+.      .++|++||...+.
T Consensus        74 ~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  153 (287)
T PRK06194         74 ADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL  153 (287)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            5532     47999999984                    34445554443    454443      5899999987764


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH----h-----CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE----N-----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e----~-----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                      ....       ...+..+|.+.+.++..    +     ++++..+.||.+..+          +.....+++..+++++.
T Consensus       154 ~~~~-------~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~----------~~~~~~~~~~~~~~~~~  216 (287)
T PRK06194        154 APPA-------MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG----------IWQSERNRPADLANTAP  216 (287)
T ss_pred             CCCC-------CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc----------cccccccCchhcccCcc
Confidence            3211       01122345444443332    2     244556666555333          23344456777788888


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceE
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI  320 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~  320 (401)
                      +.++|++++|....+....                 .++..|+++.+.+.+......
T Consensus       217 ~~~~~~~~~~~~~~~~~~~-----------------~~s~~dva~~i~~~~~~~~~~  256 (287)
T PRK06194        217 PTRSQLIAQAMSQKAVGSG-----------------KVTAEEVAQLVFDAIRAGRFY  256 (287)
T ss_pred             ccchhhHHHHHHHhhhhcc-----------------CCCHHHHHHHHHHHHHcCCeE
Confidence            8999999999887753221                 179999999999987544333

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.64  E-value=1.6e-15  Score=140.78  Aligned_cols=211  Identities=14%  Similarity=0.117  Sum_probs=128.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++||||    ||+|+||++++++|+++|++|++++|+..........    +.... ...+.++.+|   .+++..+++
T Consensus         2 ~k~ilIt----G~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~   73 (259)
T PRK12384          2 NQVAVVI----GGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQE----INAEYGEGMAYGFGADATSEQSVLALSR   73 (259)
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHhcCCceeEEEEccCCCHHHHHHHHH
Confidence            4689999    9999999999999999999999999986543321110    00000 1246667777   555555544


Q ss_pred             C-----CcccEEEeCCCC--------------------ChhhHHHHHH----HHHhCC-CCEEEEecccc-cccCCCCCC
Q 015746          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSG-VKQFLFISSAG-IYKPADEPP  198 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~g-v~~~v~~SS~~-vy~~~~~~~  198 (401)
                      .     .++|+|||++|.                    |+.++.++++    .+++.+ -.++|++||.. .++....  
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~--  151 (259)
T PRK12384         74 GVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHN--  151 (259)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCC--
Confidence            3     247999999983                    4555444444    444455 35899999854 3432211  


Q ss_pred             CCCCCCCCCCCChHHHHHHH----H---HhCCCeEEEecCeeecCCCCCCcHHHHHHHHH--cCCCcccCCCCcceeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYI----S---ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--RKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~----~---e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v  269 (401)
                            ..+..+|.+.+.++    .   ..|+++.++|||.++++.......+.+.....  .+.....+.++.....++
T Consensus       152 ------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T PRK12384        152 ------SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGC  225 (259)
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCC
Confidence                  11223454432222    2   24899999999998876433222222211110  000011222333456678


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +++|++++++.++.+... ..|++|++.+++.
T Consensus       226 ~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        226 DYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             CHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            999999999988876543 4579999998863

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.64  E-value=4.4e-15  Score=137.61  Aligned_cols=204  Identities=15%  Similarity=0.194  Sum_probs=129.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       ..+..  ..+.++.+|   .+++.+
T Consensus         8 ~~~k~vlIt----Ga~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~i~~~~~~~~~~~~D~~~~~~~~~   76 (255)
T PRK07523          8 LTGRRALVT----GSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA-------ESLKGQGLSAHALAFDVTDHDAVRA   76 (255)
T ss_pred             CCCCEEEEE----CCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-------HHHHhcCceEEEEEccCCCHHHHHH
Confidence            346899999    99999999999999999999999999875432211       11111  134555566   666666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+++.                    |+.++.++++++.+    .+.++||++||...+..... 
T Consensus        77 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-  155 (255)
T PRK07523         77 AIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG-  155 (255)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC-
Confidence            66542     37999999984                    34556666666654    35679999999765422110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            ...+..+|.+.+.+.+       .+|++++++|||.+.++...... ...+...+....+.         ..+.
T Consensus       156 ------~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~  220 (255)
T PRK07523        156 ------IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPA---------GRWG  220 (255)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCC---------CCCc
Confidence                  0111224444433322       24899999999999987432110 01112222222222         2345


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      .++|+|.+++.++.+... .+|+++++.++...+
T Consensus       221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        221 KVEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             CHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence            799999999999986543 457999999886543

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.7e-15  Score=137.79  Aligned_cols=189  Identities=17%  Similarity=0.128  Sum_probs=117.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||++++++|+++|++|++++|+.++...+..        ....++.++.+|   .+.+.++++.
T Consensus         4 ~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~d~~~~~~~~~~   71 (277)
T PRK06180          4 MKTWLIT----GVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA--------LHPDRALARLLDVTDFDAIDAVVAD   71 (277)
T ss_pred             CCEEEEe----cCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh--------hcCCCeeEEEccCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998755432211        111245555666   5566655553


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .     ++|+|||++|.                    |+.++.+++++    +++.+.++||++||...+.....  .  
T Consensus        72 ~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~--~--  147 (277)
T PRK06180         72 AEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPG--I--  147 (277)
T ss_pred             HHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCC--c--
Confidence            2     37999999984                    34556666666    44556678999999776543210  0  


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC------cHHHH---HHHHHcCCCcccCCCCcce
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD------CEEWF---FDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~  265 (401)
                         ..+..+|.+++.+.+.       .|++++++|||.++++.....      ....+   +......   .....+   
T Consensus       148 ---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---  218 (277)
T PRK06180        148 ---GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQA---REAKSG---  218 (277)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHH---HHhhcc---
Confidence               0111234433332222       389999999999987632110      11111   1111100   000111   


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ..+.+++|+|++++.+++.+..
T Consensus       219 ~~~~~~~dva~~~~~~l~~~~~  240 (277)
T PRK06180        219 KQPGDPAKAAQAILAAVESDEP  240 (277)
T ss_pred             CCCCCHHHHHHHHHHHHcCCCC
Confidence            2345799999999999988765

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.7e-15  Score=134.92  Aligned_cols=207  Identities=17%  Similarity=0.153  Sum_probs=125.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+. ...+..    .+... ...+.++.+|   ++++.+++
T Consensus         5 ~~k~vlIt----GasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~----~l~~~-~~~~~~~~~D~~~~~~~~~~~   75 (248)
T PRK07806          5 PGKTALVT----GSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVA----EIEAA-GGRASAVGADLTDEESVAALM   75 (248)
T ss_pred             CCcEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHH----HHHhc-CCceEEEEcCCCCHHHHHHHH
Confidence            35799999    999999999999999999999999987532 111000    00110 1245566666   66666555


Q ss_pred             cC-----CcccEEEeCCCC--------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCCCCCCC
Q 015746          149 GG-----VTFDVVLDNNGK--------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKP  207 (401)
Q Consensus       149 ~~-----~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~  207 (401)
                      +.     .++|+|||+++.              |+.++.++++++...  ...+||++||..........+...  ...+
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~--~~~Y  153 (248)
T PRK07806         76 DTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPE--YEPV  153 (248)
T ss_pred             HHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCcc--ccHH
Confidence            42     147999999873              567888999988764  224899999965421111011110  0111


Q ss_pred             CCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC-CCcccCCCCcceeeeeeHHHHHHHHH
Q 015746          208 DAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLT  279 (401)
Q Consensus       208 ~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~~~~  279 (401)
                      ..+|.++|.+++.       .++++++++|+.+-++..         ..+... .+-.+.........+++++|+|++++
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT---------ATLLNRLNPGAIEARREAAGKLYTVSEFAAEVA  224 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh---------hhhhccCCHHHHHHHHhhhcccCCHHHHHHHHH
Confidence            2345555544433       278888898887765421         111110 00000000011236889999999999


Q ss_pred             HHhcCCCcCCCcEEEecCCCC
Q 015746          280 LAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       280 ~~~~~~~~~~g~~~~~~~~~~  300 (401)
                      .+++... .+|++|++++++.
T Consensus       225 ~l~~~~~-~~g~~~~i~~~~~  244 (248)
T PRK07806        225 RAVTAPV-PSGHIEYVGGADY  244 (248)
T ss_pred             HHhhccc-cCccEEEecCccc
Confidence            9998553 3469999999874

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.3e-14  Score=133.56  Aligned_cols=203  Identities=14%  Similarity=0.182  Sum_probs=127.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+|+||++++++|+++|++|+++.|..............++.. ....+.++.+|   .+.+.++++
T Consensus         5 ~~~~ilIt----Gasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          5 DSRRVLIT----GGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999877543221100000000000 01245667777   555555553


Q ss_pred             C-----CcccEEEeCCCC--------------------ChhhHHHHHHHHH-----hCCCCEEEEecccccccCCCCCCC
Q 015746          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~-----~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      .     .++|+|||++|.                    |+.++.++++++.     +.+.++||++||...+.....   
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  156 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG---  156 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC---
Confidence            2     247999999983                    4566778888877     556678999999876543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          ...+..+|.+.+.+.+.       .+++++++|||.++++........   ..+....+..         .+.+++
T Consensus       157 ----~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~~---------~~~~~~  220 (249)
T PRK12827        157 ----QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPVQ---------RLGEPD  220 (249)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCCc---------CCcCHH
Confidence                01122344443332222       389999999999999864432111   2222222221         234789


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      |++++++.++.+... .+|+++++.++.
T Consensus       221 ~va~~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        221 EVAALVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence            999999998876543 457899988763

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=1.1e-14  Score=134.40  Aligned_cols=202  Identities=14%  Similarity=0.179  Sum_probs=128.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++...+..       .+. ...+.++.+|   ++++..++
T Consensus         4 ~~~~vlIt----Gasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~   72 (251)
T PRK07231          4 EGKVAIVT----GASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-------EILAGGRAIAVAADVSDEADVEAAV   72 (251)
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HHhcCCeEEEEECCCCCHHHHHHHH
Confidence            45799999    999999999999999999999999998855432111       111 1245667776   66666665


Q ss_pred             cCC-----cccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+++.                     |+.+    ++.+++.+++.+.++||++||...+.+.... 
T Consensus        73 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  151 (251)
T PRK07231         73 AAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL-  151 (251)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc-
Confidence            443     47999999984                     2233    4455555555677899999998876543211 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcH---HHHHHHHHcCCCcccCCCCcceeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                            ..+..+|.+.+.++..       .+++++.++||.+.++.......   ..+........         ....+
T Consensus       152 ------~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  216 (251)
T PRK07231        152 ------GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI---------PLGRL  216 (251)
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC---------CCCCC
Confidence                  0111234333322222       27899999999997653221100   01111111111         12346


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ++++|+|++++.++..+.. .+|+.+.+.++..+
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        217 GTPEDIANAALFLASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCeEEECCCccC
Confidence            7999999999999976643 45688888876543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.62  E-value=9.5e-15  Score=135.82  Aligned_cols=207  Identities=17%  Similarity=0.150  Sum_probs=125.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+.++||||    ||+|+||++++++|+++|++|++++|+.+....+..       ......+.++.+|   ++.+..++
T Consensus         9 ~~~~~vlIt----Ga~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~   77 (264)
T PRK12829          9 LDGLRVLVT----GGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-------RLPGAKVTATVADVADPAQVERVF   77 (264)
T ss_pred             cCCCEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HHhcCceEEEEccCCCHHHHHHHH
Confidence            456899999    999999999999999999999999997654332110       1111134566666   56565555


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCC-CEEEEecccccc-cCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGV-KQFLFISSAGIY-KPADE  196 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv-~~~v~~SS~~vy-~~~~~  196 (401)
                      +..     ++|+|||+++.                     |+.++.++++++    +..+. ++|+++||...+ +....
T Consensus        78 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~  157 (264)
T PRK12829         78 DTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGR  157 (264)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCC
Confidence            432     47999999984                     234555555554    44455 578888875532 21111


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCccc-C---CCCcce
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI-P---GSGMQF  265 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~  265 (401)
                              ..+..+|.+.+.++..       .++.++++|||+++++..... .......  .+..... .   ......
T Consensus       158 --------~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~  226 (264)
T PRK12829        158 --------TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV-IEARAQQ--LGIGLDEMEQEYLEKISL  226 (264)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH-hhhhhhc--cCCChhHHHHHHHhcCCC
Confidence                    1122345554444333       378999999999999853221 1000000  0010000 0   000112


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~  300 (401)
                      ..+++++|+++++..++.... ..+|+.|+++++..
T Consensus       227 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        227 GRMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             CCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            347899999999999886542 34578999998753

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.1e-15  Score=137.75  Aligned_cols=207  Identities=13%  Similarity=0.087  Sum_probs=127.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHH--
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGN--  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~--  146 (401)
                      ++++||||    ||+|+||+++++.|+++|++|++++|+.+....+...    ..... ..+++++.+|   ++++..  
T Consensus         2 ~~k~~lIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~   73 (280)
T PRK06914          2 NKKIAIVT----GASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ----ATQLNLQQNIKVQQLDVTDQNSIHNFQ   73 (280)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH----HHhcCCCCceeEEecCCCCHHHHHHHH
Confidence            35789999    9999999999999999999999999987544322110    00000 1256677777   444443  


Q ss_pred             -hhcC-CcccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCCEEEEeccccc-ccCCCCCCC
Q 015746          147 -VVGG-VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGI-YKPADEPPH  199 (401)
Q Consensus       147 -~~~~-~~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~v-y~~~~~~~~  199 (401)
                       +.+. .++|+|||+++.                    |+.++.+++++    +++.+.++||++||... ++.....  
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~--  151 (280)
T PRK06914         74 LVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLS--  151 (280)
T ss_pred             HHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCc--
Confidence             2222 147999999983                    34455555555    46667779999999643 3322111  


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC------------cHHHHHHHHHcCCCcccCC
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD------------CEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~------------~~~~~~~~~~~~~~~~~~~  260 (401)
                            .+..+|.+.+.+++.       ++++++++|||.++++.....            ....++..+....     .
T Consensus       152 ------~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  220 (280)
T PRK06914        152 ------PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-----N  220 (280)
T ss_pred             ------hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-----h
Confidence                  122356555554433       489999999999988732110            0011111111100     0


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHH
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~  304 (401)
                        .....+++++|+|++++.+++++...  ..|+++.+..+++.
T Consensus       221 --~~~~~~~~~~dva~~~~~~~~~~~~~--~~~~~~~~~~~~~~  260 (280)
T PRK06914        221 --SGSDTFGNPIDVANLIVEIAESKRPK--LRYPIGKGVKLMIL  260 (280)
T ss_pred             --hhhhccCCHHHHHHHHHHHHcCCCCC--cccccCCchHHHHH
Confidence              01234678999999999999987762  57888876655444

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.61  E-value=2.2e-14  Score=132.31  Aligned_cols=202  Identities=14%  Similarity=0.173  Sum_probs=126.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....+..    .+.. ...++.++.+|   .+++.+++.
T Consensus         2 ~~~~ilIt----Gas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~d~~~~~~~~~~~~   72 (250)
T TIGR03206         2 KDKTAIVT----GGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAA----DIRA-KGGNAQAFACDITDRDSVDTAVA   72 (250)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHH----HHHh-cCCcEEEEEcCCCCHHHHHHHHH
Confidence            36899999    999999999999999999999999988754432211    0000 01246667776   555555554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+++.                    |+.+..++++++    ++.+.++||++||...+......   
T Consensus        73 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~---  149 (250)
T TIGR03206        73 AAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGE---  149 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCC---
Confidence            21     37999999983                    445555655554    35667799999998877543211   


Q ss_pred             CCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                          ..+..+|.+.+.+.+    +   .+++++++|||.++++.....     ....++..+....+.         ..+
T Consensus       150 ----~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  216 (250)
T TIGR03206       150 ----AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRL  216 (250)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCC
Confidence                011223433322222    2   289999999999988732110     001122222222221         123


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ...+|+|+++..++..+.. ..|+++++.++.
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       217 GQPDDLPGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             cCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence            4679999999999877653 457999998763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09186 flagellin modification protein A; Provisional

Probab=99.60  E-value=1.4e-14  Score=134.11  Aligned_cols=204  Identities=16%  Similarity=0.121  Sum_probs=126.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCccc-chhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-EIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+|+||||    ||+|+||+++++.|+++|++|++++|+.++......    .+. ......+.++.+|   ++++.+++
T Consensus         3 ~~k~vlIt----Gas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (256)
T PRK09186          3 KGKTILIT----GAGGLIGSALVKAILEAGGIVIAADIDKEALNELLE----SLGKEFKSKKLSLVELDITDQESLEEFL   74 (256)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHH----HHHhhcCCCceeEEEecCCCHHHHHHHH
Confidence            35899999    999999999999999999999999998755432110    000 0011234455666   66666666


Q ss_pred             cCC-----cccEEEeCCCC-----------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          149 GGV-----TFDVVLDNNGK-----------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~-----------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +..     ++|+|||+|+.                       |+    ..++.+++.+++.+.++||++||...+.....
T Consensus        75 ~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  154 (256)
T PRK09186         75 SKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF  154 (256)
T ss_pred             HHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc
Confidence            542     27999999852                       12    33456666666677779999999765432211


Q ss_pred             CCCCCCCCC----CCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          197 PPHVEGDVV----KPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       197 ~~~~E~~~~----~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                       ...++.+.    .+..+|.+.+.+.+    +   .++++++++||.++++..     ..+........+         .
T Consensus       155 -~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~~---------~  219 (256)
T PRK09186        155 -EIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCCN---------G  219 (256)
T ss_pred             -hhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcCC---------c
Confidence             11122211    12234444443332    1   378999999998876531     112222211111         1


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+++++|+|++++.++++... .+|+++.+.++.
T Consensus       220 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        220 KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             cCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            2367999999999999986653 457888888764

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.60  E-value=9.4e-14  Score=126.80  Aligned_cols=189  Identities=14%  Similarity=0.161  Sum_probs=121.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc-
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG-  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~-  149 (401)
                      .|+||||    ||+|+||++++++|+++|++|++++|+.++..                ..+++.+|   .+++.++++ 
T Consensus         3 ~k~vlIt----G~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------------~~~~~~~D~~~~~~~~~~~~~   62 (234)
T PRK07577          3 SRTVLVT----GATKGIGLALSLRLANLGHQVIGIARSAIDDF----------------PGELFACDLADIEQTAATLAQ   62 (234)
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEeCCccccc----------------CceEEEeeCCCHHHHHHHHHH
Confidence            5789999    99999999999999999999999999875411                11234444   555554443 


Q ss_pred             ---CCcccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCC
Q 015746          150 ---GVTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       150 ---~~~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                         ..++|+|||+++.                    |+.+    ...++.++++.+.++||++||...|+.....     
T Consensus        63 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----  137 (234)
T PRK07577         63 INEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRT-----  137 (234)
T ss_pred             HHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCch-----
Confidence               2357999999984                    1222    3445566666777899999998876543211     


Q ss_pred             CCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                         .+..+|.+.+.+.+.       .|+.++++|||.+..+.....  ........+....+.   +      ....++|
T Consensus       138 ---~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~  205 (234)
T PRK07577        138 ---SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM---R------RLGTPEE  205 (234)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC---C------CCcCHHH
Confidence               122244444333322       389999999999987642110  011111222222221   1      1237899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|.+++.++..+.. .+|+.+++.++.
T Consensus       206 ~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        206 VAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHHHHHHhCcccCCccceEEEecCCc
Confidence            99999999987643 457899888765

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.60  E-value=7.7e-14  Score=129.16  Aligned_cols=202  Identities=12%  Similarity=0.144  Sum_probs=125.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +|.||||    ||+|+||++++++|+++|++|++++|..... .....    .+.. ...++.++.+|   .+++.++++
T Consensus         2 ~k~vlIt----G~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~   72 (256)
T PRK12745          2 RPVALVT----GGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQ----ELRA-LGVEVIFFPADVADLSAHEAMLD   72 (256)
T ss_pred             CcEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHH----HHHh-cCCceEEEEecCCCHHHHHHHHH
Confidence            4689999    9999999999999999999999999875321 11000    0000 01246667777   555555554


Q ss_pred             CC-----cccEEEeCCCC----------------------ChhhHHHHHHHHHhC-----C-----CCEEEEeccccccc
Q 015746          150 GV-----TFDVVLDNNGK----------------------NLDAVRPVADWAKSS-----G-----VKQFLFISSAGIYK  192 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~aa~~~-----g-----v~~~v~~SS~~vy~  192 (401)
                      ..     ++|+|||++|.                      |+.++.++++++...     +     .++||++||...+.
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  152 (256)
T PRK12745         73 AAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM  152 (256)
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc
Confidence            32     47999999973                      445566666655332     1     46799999977653


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                      +....       ..+..+|.+.+.+++.       .+++++++|||.++++.... ....+......+ ..+       .
T Consensus       153 ~~~~~-------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~-~~~-------~  216 (256)
T PRK12745        153 VSPNR-------GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKYDALIAKG-LVP-------M  216 (256)
T ss_pred             CCCCC-------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhHHhhhhhc-CCC-------c
Confidence            32110       1122355554443322       48899999999998875432 111221111111 111       1


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ..+.+++|+++++..++..... ..|++|++.++..
T Consensus       217 ~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        217 PRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence            3456899999999988876533 4579999988754

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.59  E-value=8.5e-15  Score=135.21  Aligned_cols=200  Identities=14%  Similarity=0.135  Sum_probs=125.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +++++|||    ||+|+||++++++|+++|++|+++.|+.+.......       ++ ....+.++.+|   ++++.+++
T Consensus         4 ~~k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~   72 (252)
T PRK06138          4 AGRVAIVT----GAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA-------AIAAGGRAFARQGDVGSAEAVEALV   72 (252)
T ss_pred             CCcEEEEe----CCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH-------HHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            45799999    999999999999999999999999998754322111       11 01235666676   56666555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccc-cCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIY-KPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy-~~~~~~~  198 (401)
                      +..     ++|+|||+++.                    |+.++    ..+++++++.+.++||++||...+ +.....+
T Consensus        73 ~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~  152 (252)
T PRK06138         73 DFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAA  152 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccH
Confidence            432     47999999994                    23333    345555666777899999997654 3221111


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc----HHHHHHHHHcCCCcccCCCCcceee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              +..+|.+.+.+++.       .+++++++|||.++++......    ....+.....+.        .....
T Consensus       153 --------Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  216 (252)
T PRK06138        153 --------YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNR  216 (252)
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCC
Confidence                    12244444443333       2899999999999887432100    000011111110        11123


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +++++|+++.++.++.++.. ..|..+.+.++.
T Consensus       217 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        217 FGTAEEVAQAALFLASDESSFATGTTLVVDGGW  249 (252)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence            67899999999999988654 346888887653

>PRK06182 short chain dehydrogenase; Validated

Probab=99.59  E-value=4.2e-14  Score=132.43  Aligned_cols=197  Identities=17%  Similarity=0.131  Sum_probs=123.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++|+||    ||+|+||++++++|+++|++|++++|+.++...           +...+++++.+|   .+++.++++
T Consensus         2 ~~k~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-----------~~~~~~~~~~~Dv~~~~~~~~~~~   66 (273)
T PRK06182          2 QKKVALVT----GASSGIGKATARRLAAQGYTVYGAARRVDKMED-----------LASLGVHPLSLDVTDEASIKAAVD   66 (273)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-----------HHhCCCeEEEeeCCCHHHHHHHHH
Confidence            35799999    999999999999999999999999998754432           112246666666   666666665


Q ss_pred             CC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||++|.                    |+.+    ++.++..+++.+.+++|++||.+.+......   
T Consensus        67 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~---  143 (273)
T PRK06182         67 TIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLG---  143 (273)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCc---
Confidence            22     57999999984                    2223    5667777777777799999997643221100   


Q ss_pred             CCCCCCCCCChHHHHHHH-------HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC---CCc--------ccCCCC
Q 015746          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK---RPV--------PIPGSG  262 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~-------~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~  262 (401)
                          ..+..+|.+.+.+.       ...|++++++|||.+.++.....     ...+...   .+.        ..+...
T Consensus       144 ----~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (273)
T PRK06182        144 ----AWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIA-----ADHLLKTSGNGAYAEQAQAVAASMRST  214 (273)
T ss_pred             ----cHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhh-----hhhhcccccccchHHHHHHHHHHHHHh
Confidence                01223454444432       12389999999999988742110     0001000   000        000111


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~  298 (401)
                      .....+.+++|+|++++.+++....  ...|+++.+
T Consensus       215 ~~~~~~~~~~~vA~~i~~~~~~~~~--~~~~~~g~~  248 (273)
T PRK06182        215 YGSGRLSDPSVIADAISKAVTARRP--KTRYAVGFG  248 (273)
T ss_pred             hccccCCCHHHHHHHHHHHHhCCCC--CceeecCcc
Confidence            1123456899999999999987543  246766543

>PRK06128 oxidoreductase; Provisional

Probab=99.59  E-value=7.4e-14  Score=132.72  Aligned_cols=205  Identities=14%  Similarity=0.159  Sum_probs=130.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++..++.+.... ..    ....+.  ...+.++.+|   .+++.+
T Consensus        53 l~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~Dl~~~~~v~~  123 (300)
T PRK06128         53 LQGRKALIT----GADSGIGRATAIAFAREGADIALNYLPEEEQDA-AE----VVQLIQAEGRKAVALPGDLKDEAFCRQ  123 (300)
T ss_pred             cCCCEEEEe----cCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHH-HH----HHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence            456899999    999999999999999999999888765432110 00    001111  1235566666   555555


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +++..     ++|+|||++|.                     |+.++.++++++...  .-.+||++||...|...... 
T Consensus       124 ~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  202 (300)
T PRK06128        124 LVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL-  202 (300)
T ss_pred             HHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc-
Confidence            55432     47999999983                     456677777877643  12489999998887543211 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                            ..+..+|.+.+.+.+.       .|+++++|+||.+.++.... ......+..+....++         ..+.+
T Consensus       203 ------~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~  267 (300)
T PRK06128        203 ------LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPM---------KRPGQ  267 (300)
T ss_pred             ------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCC---------CCCcC
Confidence                  1122345444443322       38999999999999985322 1112222222222222         23458


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+|+|.+++.++.+... ..|++|++.++..+
T Consensus       268 p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        268 PVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            89999999998876543 45799999988654

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.7e-14  Score=133.86  Aligned_cols=199  Identities=15%  Similarity=0.203  Sum_probs=124.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .++.||||    ||+|+||++++++|+++|++|+++.|+.+.......    .+... ...+.++.+|   .+++.++++
T Consensus         9 ~~~~vlVt----Ga~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   79 (274)
T PRK07775          9 DRRPALVA----GASSGIGAATAIELAAAGFPVALGARRVEKCEELVD----KIRAD-GGEAVAFPLDVTDPDSVKSFVA   79 (274)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCeEEEEECCCCCHHHHHHHHH
Confidence            45789999    999999999999999999999999987643322110    00000 1245566666   566665554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+++.                    |+.++.++++++.    +.+..+||++||...|.....    
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----  155 (274)
T PRK07775         80 QAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH----  155 (274)
T ss_pred             HHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC----
Confidence            32     47999999984                    3455566666543    345568999999887754311    


Q ss_pred             CCCCCCCCCChHHHHHHHHHh-------CCCeEEEecCeeecCCCC---CCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          201 EGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                         ...+..+|.+.+.++...       |++++++|||.+.++...   ......++.....      ++ +.....+++
T Consensus       156 ---~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~  225 (274)
T PRK07775        156 ---MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDYFLR  225 (274)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------hc-ccccccccC
Confidence               011223555555544432       899999999988654211   1111112221111      11 112356899


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEec
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLV  296 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~  296 (401)
                      ++|+|++++.+++++..  +.+||+.
T Consensus       226 ~~dva~a~~~~~~~~~~--~~~~~~~  249 (274)
T PRK07775        226 ASDLARAITFVAETPRG--AHVVNME  249 (274)
T ss_pred             HHHHHHHHHHHhcCCCC--CCeeEEe
Confidence            99999999999987643  4678776

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.59  E-value=5.3e-14  Score=130.24  Aligned_cols=199  Identities=15%  Similarity=0.158  Sum_probs=126.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+......        ...+....+.++.+|   .+++.++++
T Consensus        14 ~~k~vlIt----Gas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~--------~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (255)
T PRK06841         14 SGKVAVVT----GGASGIGHAIAELFAAKGARVALLDRSEDVAEV--------AAQLLGGNAKGLVCDVSDSQSVEAAVA   81 (255)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHhhCCceEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999997643211        011112234456666   555555554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccc-cCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIY-KPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy-~~~~~~~~  199 (401)
                      ..     ++|+|||++|.                    |+.+..++++++..    .+.++||++||...+ +....   
T Consensus        82 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  158 (255)
T PRK06841         82 AVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH---  158 (255)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC---
Confidence            32     47999999983                    45566666666543    456799999997643 32211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                           ..+..+|.+.+.+.+.       .|++++.|+||.+..+.............+....+         ...+.+++
T Consensus       159 -----~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  224 (255)
T PRK06841        159 -----VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP---------AGRFAYPE  224 (255)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCC---------CCCCcCHH
Confidence                 1112244443332222       37899999999998764321111111111222211         13456899


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      |++++++.++..+.. .+|+++.+.++..
T Consensus       225 ~va~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        225 EIAAAALFLASDAAAMITGENLVIDGGYT  253 (255)
T ss_pred             HHHHHHHHHcCccccCccCCEEEECCCcc
Confidence            999999999987654 5679999988754

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3e-14  Score=131.81  Aligned_cols=200  Identities=17%  Similarity=0.174  Sum_probs=126.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ++++|+||    ||+|+||++++++|+++|++|.++ .|+.++....       ...+.  ...+.++.+|   .+++.+
T Consensus         5 ~~~~ilIt----Gasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~D~~d~~~i~~   73 (254)
T PRK12746          5 DGKVALVT----GASRGIGRAIAMRLANDGALVAIHYGRNKQAADET-------IREIESNGGKAFLIEADLNSIDGVKK   73 (254)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-------HHHHHhcCCcEEEEEcCcCCHHHHHH
Confidence            35799999    999999999999999999999875 5655332211       01111  1235566666   566665


Q ss_pred             hhcC-----------CcccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccC
Q 015746          147 VVGG-----------VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (401)
Q Consensus       147 ~~~~-----------~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~  193 (401)
                      +++.           .++|+|||++|.                    |+.++.++++++.+.  +.++||++||..++.+
T Consensus        74 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~  153 (254)
T PRK12746         74 LVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG  153 (254)
T ss_pred             HHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence            5542           247999999983                    456666777776653  3358999999887753


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                      ...       ...+..+|.+.+.+.+.       .++++++++||.++++..........+........        ...
T Consensus       154 ~~~-------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~--------~~~  218 (254)
T PRK12746        154 FTG-------SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSS--------VFG  218 (254)
T ss_pred             CCC-------CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcC--------CcC
Confidence            211       11123456665544322       37899999999998874221000001111111111        112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      .+++++|+++++..++.+... ..|++|++.++
T Consensus       219 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        219 RIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            456899999999988876543 34689999876

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.3e-14  Score=130.69  Aligned_cols=198  Identities=15%  Similarity=0.141  Sum_probs=128.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++++||    ||+|+||+++++.|+++|++|++++|+.++...+..          ..+..++.+|   .+.+.+++
T Consensus         7 ~~~~~~lIt----Ga~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~   72 (245)
T PRK07060          7 FSGKSVLVT----GASSGIGRACAVALAQRGARVVAAARNAAALDRLAG----------ETGCEPLRLDVGDDAAIRAAL   72 (245)
T ss_pred             cCCCEEEEe----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HhCCeEEEecCCCHHHHHHHH
Confidence            345799999    999999999999999999999999998754322110          1134455555   55666666


Q ss_pred             cCC-cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CCEEEEecccccccCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~g-v~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      +.. ++|+|||+++.                    |+.++.++++++.+    .+ .++||++||...+.....      
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  146 (245)
T PRK07060         73 AAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD------  146 (245)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC------
Confidence            543 47999999983                    34555666665544    23 368999999876543211      


Q ss_pred             CCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcH-HHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                       ...+..+|.+++.+++.       .+++++.+||+.++++....... ......+....         ....+++++|+
T Consensus       147 -~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~  216 (245)
T PRK07060        147 -HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI---------PLGRFAEVDDV  216 (245)
T ss_pred             -CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC---------CCCCCCCHHHH
Confidence             11122355555553332       37899999999999875321100 00111111111         12347899999


Q ss_pred             HHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          275 SSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       275 a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +++++.++..+.. .+|+++++.+|.
T Consensus       217 a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        217 AAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HHHHHHHcCcccCCccCcEEeECCCc
Confidence            9999999987653 457999998764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.1e-14  Score=133.12  Aligned_cols=204  Identities=15%  Similarity=0.148  Sum_probs=126.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ..++.++.+|   .+++..+
T Consensus         4 ~~k~vlIt----Ga~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (258)
T PRK07890          4 KGKVVVVS----GVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA-------AEIDDLGRRALAVPTDITDEDQCANL   72 (258)
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-------HHHHHhCCceEEEecCCCCHHHHHHH
Confidence            46899999    99999999999999999999999999875433211       1111  1245666666   5566555


Q ss_pred             hcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+++.                     |+.+...+++++...   ..++||++||...+.+...  
T Consensus        73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--  150 (258)
T PRK07890         73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK--  150 (258)
T ss_pred             HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC--
Confidence            5432     47999999973                     345556677766542   1248999999876543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc---ccC---CCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV---PIP---GSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~  265 (401)
                           ...+..+|.+++.+++.       .+++++++|||.++++....     ++.....+...   .+.   -.....
T Consensus       151 -----~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (258)
T PRK07890        151 -----YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG-----YFRHQAGKYGVTVEQIYAETAANSDL  220 (258)
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH-----HhhhcccccCCCHHHHHHHHhhcCCc
Confidence                 11123355555444433       37999999999999985321     11111110000   000   001112


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      ..+.+++|++++++.+++... ..+|+++.+.+++
T Consensus       221 ~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        221 KRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             cccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            346789999999999887543 3456888777765

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.58  E-value=5.5e-14  Score=131.88  Aligned_cols=212  Identities=18%  Similarity=0.162  Sum_probs=131.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .+++++|||    ||+|+||++++++|+++|++|++++|+.+......       .++..  ..+.++.+|   .+++.+
T Consensus         4 ~~~k~vlVT----Gas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~   72 (275)
T PRK05876          4 FPGRGAVIT----GGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-------NHLRAEGFDVHGVMCDVRHREEVTH   72 (275)
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            346789999    99999999999999999999999998875443211       11111  235556666   566665


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||++|.                    |+.+..++++++.    +.+ ..++|++||...+.+.. 
T Consensus        73 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~-  151 (275)
T PRK05876         73 LADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA-  151 (275)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC-
Confidence            55432     47999999983                    4455666666553    444 45899999987764321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHH---------HHH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKY---------ISE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~---------~~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                 ....|+..|.         ..|   .|+++++++||.+.++..... ................++....
T Consensus       152 -----------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  219 (275)
T PRK05876        152 -----------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS-ERIRGAACAQSSTTGSPGPLPL  219 (275)
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch-hhhcCccccccccccccccccc
Confidence                       1234444443         223   389999999999987643210 0000000011111222333334


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHh
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~  314 (401)
                      .+++++++|+|+.++.++.+.     +.+.+.+  .....++.+...+..
T Consensus       220 ~~~~~~~~dva~~~~~ai~~~-----~~~~~~~--~~~~~~~~~~~~~~~  262 (275)
T PRK05876        220 QDDNLGVDDIAQLTADAILAN-----RLYVLPH--AASRASIRRRFERID  262 (275)
T ss_pred             cccCCCHHHHHHHHHHHHHcC-----CeEEecC--hhhHHHHHHHHHHHH
Confidence            567899999999999999764     4455543  345566665555554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.58  E-value=1.2e-13  Score=127.00  Aligned_cols=198  Identities=18%  Similarity=0.233  Sum_probs=122.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .+++||||    ||+|+||++++++|+++|++|+++.|+.... ..+       ..++.  ...+.++.+|   .+++.+
T Consensus         4 ~~~~vlIt----G~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (248)
T PRK05557          4 EGKVALVT----GASRGIGRAIAERLAAQGANVVINYASSEAGAEAL-------VAEIGALGGKALAVQGDVSDAESVER   72 (248)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-------HHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            35799999    9999999999999999999998888876431 110       00111  1245666666   555555


Q ss_pred             hhcC-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccc-cccCCCC
Q 015746          147 VVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAG-IYKPADE  196 (401)
Q Consensus       147 ~~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~-vy~~~~~  196 (401)
                      +++.     .++|+|||+++.                    |+.++.++++++..    .+.++||++||.. +++....
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~  152 (248)
T PRK05557         73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQ  152 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCC
Confidence            5543     147999999984                    34555566665543    4567899999964 4443211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                      .        .+..+|.+.+.+++       ..++.+++++||.+.++.... ....+........+.         ..+.
T Consensus       153 ~--------~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~  214 (248)
T PRK05557        153 A--------NYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA-LPEDVKEAILAQIPL---------GRLG  214 (248)
T ss_pred             c--------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc-cChHHHHHHHhcCCC---------CCCc
Confidence            1        11224444433332       237899999999886653221 112222233322221         2346


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +++|+++++..++..... .+|++|++.++.
T Consensus       215 ~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        215 QPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             CHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            899999999888876332 457999998763

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.57  E-value=6.6e-14  Score=128.99  Aligned_cols=202  Identities=13%  Similarity=0.114  Sum_probs=128.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++......    .+.. ...++.++.+|   .+++.++++
T Consensus         6 ~~~~vlIt----Ga~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   76 (250)
T PRK12939          6 AGKRALVT----GAARGLGAAFAEALAEAGATVAFNDGLAAEARELAA----ALEA-AGGRAHAIAADLADPASVQRFFD   76 (250)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HHHh-cCCcEEEEEccCCCHHHHHHHHH
Confidence            45899999    999999999999999999999999887754332111    0000 01246666676   566666554


Q ss_pred             C-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCCCCC
Q 015746          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      .     .++|+|||++|.                    |+.+..++++++..    .+..+||++||...+......   
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  153 (250)
T PRK12939         77 AAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL---  153 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc---
Confidence            3     247999999984                    34555566665543    344589999997665332110   


Q ss_pred             CCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ..+..+|.+.+.+++.       .++.++.++||.+..+.........+......+.         ....+++++|
T Consensus       154 ----~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d  220 (250)
T PRK12939        154 ----GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR---------ALERLQVPDD  220 (250)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC---------CCCCCCCHHH
Confidence                0112244444443332       3788999999998776432111112222232222         2234678999


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|++++.++..... ..|+++.+.++.
T Consensus       221 va~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        221 VAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHHHHHhCccccCccCcEEEECCCc
Confidence            99999999987643 457999998864

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.57  E-value=3e-14  Score=138.78  Aligned_cols=238  Identities=15%  Similarity=0.183  Sum_probs=156.6

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCC---CeEEEEecCCCCcccCC-------CCCCCcccch---hcCCCeEE
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMK-------KPPFNRFNEI---VSAGGKTV  137 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~~~r~~~~~~~~~-------~~~~~~~~~l---~~~~~~~~  137 (401)
                      ...+++||||    |||||+|..++++|+..-   -+++.+.|.....+...       .+-+..+.+.   .-.++..+
T Consensus         9 f~~~k~i~vT----G~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi   84 (467)
T KOG1221|consen    9 FYKNKTIFVT----GATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPI   84 (467)
T ss_pred             HhCCCeEEEE----cccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceec
Confidence            3567999999    999999999999999873   27888888775543211       0000011100   11356777


Q ss_pred             EcC---------HhhHHHhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhC-CCCEEEEecccccccCC
Q 015746          138 WGD---------PAEVGNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPA  194 (401)
Q Consensus       138 ~~D---------~~~~~~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~~  194 (401)
                      .||         ..++..+.+.  +|+|||+|+.             |..+++++++.|++. +.+-||++|++.+....
T Consensus        85 ~GDi~~~~LGis~~D~~~l~~e--V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~  162 (467)
T KOG1221|consen   85 AGDISEPDLGISESDLRTLADE--VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNV  162 (467)
T ss_pred             cccccCcccCCChHHHHHHHhc--CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccc
Confidence            777         3555544444  6999999993             899999999999998 57889999998776321


Q ss_pred             ---CCCCCCCCCC------------------------------CCCCCChHHHHHHHHHh--CCCeEEEecCeeecCCCC
Q 015746          195 ---DEPPHVEGDV------------------------------VKPDAGHVQVEKYISEN--FSNWASFRPQYMIGSGNN  239 (401)
Q Consensus       195 ---~~~~~~E~~~------------------------------~~~~~~~~~~ek~~~e~--g~~~~ilRp~~v~G~~~~  239 (401)
                         .+.++.+...                              ..+.-+|-.+|..+.+.  +++.+|+||+.|......
T Consensus       163 ~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  163 GHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             ccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccC
Confidence               2223322221                              11112334445544443  789999999999986443


Q ss_pred             CCcHHH---------HHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCC----CcEEEecCC--CCCCHH
Q 015746          240 KDCEEW---------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS----SNIFNLVSD--RAVTLD  304 (401)
Q Consensus       240 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~----g~~~~~~~~--~~~t~~  304 (401)
                      + +..|         ++-...+|.--.+..+.+...++|.+|.++.+++.+.-.-....    -.+||++++  .++++.
T Consensus       243 P-~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~  321 (467)
T KOG1221|consen  243 P-FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWG  321 (467)
T ss_pred             C-CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHH
Confidence            2 1111         11112233333556788888999999999999887663221111    259999986  589999


Q ss_pred             HHHHHHHHHhC
Q 015746          305 GMAKLCAQAAG  315 (401)
Q Consensus       305 el~~~i~~~~g  315 (401)
                      ++.+...+...
T Consensus       322 ~~~e~~~~~~~  332 (467)
T KOG1221|consen  322 DFIELALRYFE  332 (467)
T ss_pred             HHHHHHHHhcc
Confidence            99999999874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.57  E-value=7.6e-14  Score=129.57  Aligned_cols=203  Identities=14%  Similarity=0.194  Sum_probs=129.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.++.+...       .++.  ...+.++.+|   ++++.++
T Consensus        11 ~~k~ilIt----Ga~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~i~~~~~~~~~~~~Dl~d~~~i~~~   79 (259)
T PRK08213         11 SGKTALVT----GGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA-------AHLEALGIDALWIAADVADEADIERL   79 (259)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            46899999    99999999999999999999999999765432211       1111  1245566676   5555444


Q ss_pred             hcC-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHhC-----CCCEEEEecccccccCCCCC
Q 015746          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS-----GVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~-----gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +..     .++|+|||+++.                    |+.++.++++++...     +.++||++||...+......
T Consensus        80 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~  159 (259)
T PRK08213         80 AEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE  159 (259)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc
Confidence            432     247999999983                    456677888876543     56689999997655432110


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                       ..  ....+..+|.+.+.+++.       .++++.+++|+.+..+.... ....+.+.+..+.+...++         .
T Consensus       160 -~~--~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~---------~  226 (259)
T PRK08213        160 -VM--DTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG-TLERLGEDLLAHTPLGRLG---------D  226 (259)
T ss_pred             -cc--CcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh-hhHHHHHHHHhcCCCCCCc---------C
Confidence             00  001112244444444333       27889999999887654322 2333444444444443333         5


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+|++.++..++..... .+|+++++.++.
T Consensus       227 ~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        227 DEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            79999998888876654 467899888763

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.57  E-value=4.5e-14  Score=128.18  Aligned_cols=187  Identities=18%  Similarity=0.195  Sum_probs=120.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+|+||+++++.|+++ ++|++++|+.++...+.        + ...+++++.+|   .+++.+++.
T Consensus         2 ~~~~vlVt----G~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~--------~-~~~~~~~~~~D~~~~~~~~~~~~   67 (227)
T PRK08219          2 ERPTALIT----GASRGIGAAIARELAPT-HTLLLGGRPAERLDELA--------A-ELPGATPFPVDLTDPEAIAAAVE   67 (227)
T ss_pred             CCCEEEEe----cCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHH--------H-HhccceEEecCCCCHHHHHHHHH
Confidence            35799999    99999999999999999 99999999865432111        0 01256677777   667777776


Q ss_pred             CC-cccEEEeCCCCC--------------------hhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC
Q 015746          150 GV-TFDVVLDNNGKN--------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       150 ~~-~~d~Vv~~a~~~--------------------~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      .. ++|+|||+++..                    +.+    +.++++++++.+ +++|++||...++.....       
T Consensus        68 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~~-------  139 (227)
T PRK08219         68 QLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPGW-------  139 (227)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCCC-------
Confidence            53 479999999841                    122    455666665554 589999998776533211       


Q ss_pred             CCCCCChHHHHHHHHHh-----C-CCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          205 VKPDAGHVQVEKYISEN-----F-SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e~-----g-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      ..+..+|.+.+.++...     + +++..++||.+.++...         .+........     ....+++++|+++++
T Consensus       140 ~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~---------~~~~~~~~~~-----~~~~~~~~~dva~~~  205 (227)
T PRK08219        140 GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR---------GLVAQEGGEY-----DPERYLRPETVAKAV  205 (227)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh---------hhhhhhcccc-----CCCCCCCHHHHHHHH
Confidence            11123455544433321     4 78888888876554211         1111100001     124578999999999


Q ss_pred             HHHhcCCCcCCCcEEEecC
Q 015746          279 TLAVENPEAASSNIFNLVS  297 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~  297 (401)
                      +.+++++..  +.++++.-
T Consensus       206 ~~~l~~~~~--~~~~~~~~  222 (227)
T PRK08219        206 RFAVDAPPD--AHITEVVV  222 (227)
T ss_pred             HHHHcCCCC--CccceEEE
Confidence            999988664  56777664

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=3.9e-14  Score=130.70  Aligned_cols=203  Identities=13%  Similarity=0.140  Sum_probs=126.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+++||||    ||+|+||++++++|+++|++|+++ .|+.++...+..    .+.. ...++.++.+|   ++++.+++
T Consensus         3 ~~~~vlIt----Ga~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~   73 (250)
T PRK08063          3 SGKVALVT----GSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAE----EIEA-LGRKALAVKANVGDVEKIKEMF   73 (250)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHh-cCCeEEEEEcCCCCHHHHHHHH
Confidence            35799999    999999999999999999998774 565543221110    0000 01245566666   66666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||++|.                    |+.++.++++++.    +.+.++||++||...+.....   
T Consensus        74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---  150 (250)
T PRK08063         74 AQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN---  150 (250)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC---
Confidence            542     47999999983                    3444555555554    345669999999766532211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                          ...+..+|.+.+.+++.       .++++++|+||.+..+..... ....+........+         ...++++
T Consensus       151 ----~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  217 (250)
T PRK08063        151 ----YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEP  217 (250)
T ss_pred             ----ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCH
Confidence                01122356665555433       478999999999977642110 00111112211111         1236789


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +|+|++++.+++++.. ..|+.+++.++..
T Consensus       218 ~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        218 EDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            9999999999987654 4579999988764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=5.4e-14  Score=129.81  Aligned_cols=195  Identities=14%  Similarity=0.124  Sum_probs=119.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhc--CCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~~  147 (401)
                      +++||||    ||+|+||++++++|+++|++|++..|.... ...       ....+..  ..+.++.+|   .+++..+
T Consensus         6 ~~~vlit----Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (252)
T PRK06077          6 DKVVVVT----GSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNE-------TLKMVKENGGEGIGVLADVSTREGCETL   74 (252)
T ss_pred             CcEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHH-------HHHHHHHcCCeeEEEEeccCCHHHHHHH
Confidence            5799999    999999999999999999999887764321 110       0011111  133445555   5555554


Q ss_pred             hcC-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCC
Q 015746          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       148 ~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ++.     .++|+|||++|.                    |+.+..++++++.+.  ..++||++||...|....     
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  149 (252)
T PRK06077         75 AKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY-----  149 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC-----
Confidence            443     147999999983                    344555666655543  224899999988775321     


Q ss_pred             CCCCCCCCCChHHHHHHH-----H----Hh--CCCeEEEecCeeecCCCCC--CcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          201 EGDVVKPDAGHVQVEKYI-----S----EN--FSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~-----~----e~--g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                             ..+.|+..|..     .    +.  ++.+.+++||.+.++....  ............        +......
T Consensus       150 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~  214 (252)
T PRK06077        150 -------GLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--------KFTLMGK  214 (252)
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--------hcCcCCC
Confidence                   12445544432     2    22  6788999999997763211  000000000010        0111235


Q ss_pred             eeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                      +++++|+|++++.+++.+.. .|++|++.+++.
T Consensus       215 ~~~~~dva~~~~~~~~~~~~-~g~~~~i~~g~~  246 (252)
T PRK06077        215 ILDPEEVAEFVAAILKIESI-TGQVFVLDSGES  246 (252)
T ss_pred             CCCHHHHHHHHHHHhCcccc-CCCeEEecCCee
Confidence            79999999999999975543 358999998853

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.6e-13  Score=129.79  Aligned_cols=202  Identities=13%  Similarity=0.140  Sum_probs=129.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchh--cCCCeEEEcC---HhhH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEV  144 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~  144 (401)
                      ..++|+||||    ||+|+||.+++++|+++|++|++++|+.... ....       ..+.  ...+.++.+|   .+.+
T Consensus        43 ~~~~k~iLIt----GasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~  111 (290)
T PRK06701         43 KLKGKVALIT----GGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK-------QRVEKEGVKCLLIPGDVSDEAFC  111 (290)
T ss_pred             CCCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH-------HHHHhcCCeEEEEEccCCCHHHH
Confidence            3446899999    9999999999999999999999999876331 1100       1111  1235566676   5555


Q ss_pred             HHhhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~  196 (401)
                      .++++..     ++|+|||+++.                     |+.+..++++++...  ...+||++||...|.....
T Consensus       112 ~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~  191 (290)
T PRK06701        112 KDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET  191 (290)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC
Confidence            5555431     47999999983                     456677777776552  2248999999887754321


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                      .       ..+..+|.+.+.+.+.       .|++++.|+||.++.+..........+......         .....+.
T Consensus       192 ~-------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~---------~~~~~~~  255 (290)
T PRK06701        192 L-------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN---------TPMQRPG  255 (290)
T ss_pred             c-------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhc---------CCcCCCc
Confidence            1       1122355544443322       389999999999988743221111222222211         1223467


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +++|+|++++.++.+... .+|.++++.++.
T Consensus       256 ~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        256 QPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            899999999999987643 457899998764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.56  E-value=6.5e-14  Score=129.03  Aligned_cols=198  Identities=16%  Similarity=0.163  Sum_probs=122.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++.+|||    ||+|+||++++++|+++|++|++..+..+ ....+       ...+.  ...+.++.+|   .+++.++
T Consensus         2 ~~~~lVt----G~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~Dl~~~~~~~~~   70 (248)
T PRK06123          2 RKVMIIT----GASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV-------VQAIRRQGGEALAVAADVADEADVLRL   70 (248)
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH-------HHHHHhCCCcEEEEEeccCCHHHHHHH
Confidence            4679999    99999999999999999999887764432 11110       01111  1234455565   5566665


Q ss_pred             hcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC------C-CCEEEEeccccc-ccC
Q 015746          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS------G-VKQFLFISSAGI-YKP  193 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~------g-v~~~v~~SS~~v-y~~  193 (401)
                      +...     ++|+|||+++.                     |+.++.++++++.+.      + -.+||++||... ++.
T Consensus        71 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  150 (248)
T PRK06123         71 FEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS  150 (248)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC
Confidence            5432     47999999984                     344555666655432      1 136999999754 443


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                      ...       ...+..+|.+.+.+++.       .++++++|||+.++++.........++..+....++...       
T Consensus       151 ~~~-------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~-------  216 (248)
T PRK06123        151 PGE-------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRG-------  216 (248)
T ss_pred             CCC-------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCC-------
Confidence            211       01133466666554432       289999999999999853222222233333333333222       


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                        .+++|++++++.++.+... ..|++|++.++
T Consensus       217 --~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        217 --GTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             --cCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence              2689999999998886543 45789999875

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.55  E-value=1.7e-13  Score=126.50  Aligned_cols=201  Identities=12%  Similarity=0.052  Sum_probs=122.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .++++|||    ||+|+||+.++++|+++|++|++++|+....              ....+.++.+|   .+++.++++
T Consensus         7 ~~k~vlIt----Gas~~iG~~la~~l~~~G~~v~~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~~~~~~   68 (252)
T PRK08220          7 SGKTVWVT----GAAQGIGYAVALAFVEAGAKVIGFDQAFLTQ--------------EDYPFATFVLDVSDAAAVAQVCQ   68 (252)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecchhhh--------------cCCceEEEEecCCCHHHHHHHHH
Confidence            45899999    9999999999999999999999999876100              01235556666   666666654


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+++.                    |+.+..++++++    ++.+..+||++||.........    
T Consensus        69 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----  144 (252)
T PRK08220         69 RLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG----  144 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC----
Confidence            32     37999999984                    344455555554    3445568999999765432211    


Q ss_pred             CCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHH-HHcCCCcccCCCCcceeeeeeHH
Q 015746          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                         ...+..+|.+.+.+.+.       .++++++++||.++++....-........ ...+. ............+++++
T Consensus       145 ---~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  220 (252)
T PRK08220        145 ---MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF-PEQFKLGIPLGKIARPQ  220 (252)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH-HHHHhhcCCCcccCCHH
Confidence               11122345444333322       48999999999999884321000000000 00000 00000111224578999


Q ss_pred             HHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          273 DLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       273 D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      |+|++++.++.... ...|+++.+.++.
T Consensus       221 dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        221 EIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             HHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            99999999987653 3456888888764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.55  E-value=7.6e-14  Score=128.38  Aligned_cols=199  Identities=15%  Similarity=0.149  Sum_probs=119.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      |++||||    ||+|+||++++++|+++|++|+++ .|+.++..+..       .++.  ...+.++.+|   ++++.++
T Consensus         1 ~~~~lIt----Ga~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~i~~~   69 (247)
T PRK09730          1 MAIALVT----GGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-------NLITQAGGKAFVLQADISDENQVVAM   69 (247)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-------HHHHhCCCeEEEEEccCCCHHHHHHH
Confidence            4689999    999999999999999999999875 45443222111       1111  1235556666   5666665


Q ss_pred             hcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHh----C---CCCEEEEecccccccCC
Q 015746          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS----S---GVKQFLFISSAGIYKPA  194 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~----~---gv~~~v~~SS~~vy~~~  194 (401)
                      ++..     ++|+|||+++.                     |+.++.++++++..    .   +..+||++||...+...
T Consensus        70 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~  149 (247)
T PRK09730         70 FTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA  149 (247)
T ss_pred             HHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC
Confidence            5532     47999999984                     22333333333222    1   12479999997654322


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                      ..      ....+..+|.+.+.+++.       .+++++++||+.+|++.............+....+...         
T Consensus       150 ~~------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  214 (247)
T PRK09730        150 PG------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQR---------  214 (247)
T ss_pred             CC------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCC---------
Confidence            10      001133456665544332       38999999999999985432212222333333333211         


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ..+++|+|++++.++.+... ..|+.|++.++
T Consensus       215 ~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        215 GGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             CcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            12689999999999876533 44688888764

>PRK05717 oxidoreductase; Validated

Probab=99.55  E-value=2.6e-13  Score=125.70  Aligned_cols=200  Identities=14%  Similarity=0.153  Sum_probs=124.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ...+.++.+|   .+++.+++
T Consensus         8 ~~~k~vlIt----G~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~~~~~~   75 (255)
T PRK05717          8 HNGRVALVT----GAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA-------KAL-GENAWFIAMDVADEAQVAAGV   75 (255)
T ss_pred             cCCCEEEEe----CCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-------HHc-CCceEEEEccCCCHHHHHHHH
Confidence            346899999    99999999999999999999999988764332211       011 1245667777   44444333


Q ss_pred             cC----C-cccEEEeCCCC----------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCC
Q 015746          149 GG----V-TFDVVLDNNGK----------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~----~-~~d~Vv~~a~~----------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +.    . ++|+|||++|.                      |+.++.++++++...   ...++|++||...+.....  
T Consensus        76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~--  153 (255)
T PRK05717         76 AEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD--  153 (255)
T ss_pred             HHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC--
Confidence            32    2 47999999983                      355677888877531   2257999998765433211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH----h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e----~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                           ...+..+|.+.+.+.+.    +  ++++..++||.+.++.........+........+.         ..+.+++
T Consensus       154 -----~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  219 (255)
T PRK05717        154 -----TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPA---------GRVGTVE  219 (255)
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCC---------CCCcCHH
Confidence                 11122355554444432    2  57889999999988743221111111111111111         1245899


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      |++.++..++.+... ..|+++.+.++.
T Consensus       220 ~va~~~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        220 DVAAMVAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HHHHHHHHHcCchhcCccCcEEEECCCc
Confidence            999999988876533 456888887664

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.3e-13  Score=127.08  Aligned_cols=198  Identities=14%  Similarity=0.110  Sum_probs=123.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++|+||    ||+|+||++++++|+++|++|++++|+.+....+.       .++ ...+.++.+|   .+++..+++
T Consensus         5 ~~k~vlIt----Gasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~   72 (249)
T PRK06500          5 QGKTALIT----GGTSGIGLETARQFLAEGARVAITGRDPASLEAAR-------AEL-GESALVIRADAGDVAAQKALAQ   72 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-------HHh-CCceEEEEecCCCHHHHHHHHH
Confidence            45799999    99999999999999999999999998764332211       011 1234555566   444444333


Q ss_pred             C-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecc-cccccCCCCCCCCC
Q 015746          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISS-AGIYKPADEPPHVE  201 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS-~~vy~~~~~~~~~E  201 (401)
                      .     -++|+|||++|.                    |+.++.++++++...  ...++|++|| .+.|+.....    
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~----  148 (249)
T PRK06500         73 ALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSS----  148 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCcc----
Confidence            2     147999999983                    466777888888642  2236777776 4445432111    


Q ss_pred             CCCCCCCCChHHHHHHH----HH---hCCCeEEEecCeeecCCC-----CCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          202 GDVVKPDAGHVQVEKYI----SE---NFSNWASFRPQYMIGSGN-----NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~----~e---~g~~~~ilRp~~v~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                          .+..+|.+.+.++    .+   .++++.++|||.++++..     .......+...+....++..         +.
T Consensus       149 ----~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  215 (249)
T PRK06500        149 ----VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGR---------FG  215 (249)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCC---------Cc
Confidence                1122444444444    22   278999999999998731     11122223333333333322         23


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .++|+|+++..++.+... ..|..+.+.++.
T Consensus       216 ~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        216 TPEEIAKAVLYLASDESAFIVGSEIIVDGGM  246 (249)
T ss_pred             CHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            789999999998876543 346778777663

>PRK08324 short chain dehydrogenase; Validated

Probab=99.54  E-value=1.1e-13  Score=145.39  Aligned_cols=210  Identities=18%  Similarity=0.151  Sum_probs=131.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||+++++.|+++|++|++++|+.+.......       ++.. .++.++.+|   .+++.++
T Consensus       420 l~gk~vLVT----GasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-------~l~~~~~v~~v~~Dvtd~~~v~~~  488 (681)
T PRK08324        420 LAGKVALVT----GAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-------ELGGPDRALGVACDVTDEAAVQAA  488 (681)
T ss_pred             CCCCEEEEe----cCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-------HHhccCcEEEEEecCCCHHHHHHH
Confidence            346899999    999999999999999999999999998754332111       1110 245666666   5555555


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCC-CEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGV-KQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv-~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|+|||++|.                    |+.+..++++++    ++.+. .+||++||...+......
T Consensus       489 ~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~  568 (681)
T PRK08324        489 FEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNF  568 (681)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCc
Confidence            5432     47999999993                    455566665544    45454 689999997665322110


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeee-cCCCCCCcHHHHHHHHHcCCCc----ccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMI-GSGNNKDCEEWFFDRIVRKRPV----PIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  265 (401)
                             ..+..+|.+.+.+++.       .|+++++++|+.+| +........ ........+...    ..++++...
T Consensus       569 -------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~l  640 (681)
T PRK08324        569 -------GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEW-IEARAAAYGLSEEELEEFYRARNLL  640 (681)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchh-hhhhhhhccCChHHHHHHHHhcCCc
Confidence                   0011233333333332       26899999999998 553221110 001111122221    134455566


Q ss_pred             eeeeeHHHHHHHHHHHhcCC-CcCCCcEEEecCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRA  300 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~-~~~~g~~~~~~~~~~  300 (401)
                      +.+++++|+|++++.++... ....|++|++.+|..
T Consensus       641 ~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        641 KREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             CCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            78999999999999998632 234479999998864

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.7e-13  Score=124.29  Aligned_cols=198  Identities=16%  Similarity=0.169  Sum_probs=123.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.....              ..++.++.+|   .+++.+++
T Consensus         7 ~~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~   68 (260)
T PRK06523          7 LAGKRALVT----GGTKGIGAATVARLLEAGARVVTTARSRPDDL--------------PEGVEFVAADLTTAEGCAAVA   68 (260)
T ss_pred             CCCCEEEEE----CCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------------CCceeEEecCCCCHHHHHHHH
Confidence            446899999    99999999999999999999999999864321              1245566666   45554443


Q ss_pred             cCC-----cccEEEeCCCC----------------------ChhhHH----HHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK----------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~----------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +..     ++|+|||++|.                      |+.+..    .+++.+++.+..++|++||...+....  
T Consensus        69 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--  146 (260)
T PRK06523         69 RAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP--  146 (260)
T ss_pred             HHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC--
Confidence            221     47999999982                      333333    344555556667899999977654311  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc----------HHHHHHHHH---cCCCcc
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----------EEWFFDRIV---RKRPVP  257 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~----------~~~~~~~~~---~~~~~~  257 (401)
                         + ....+..+|.+++.+.+.       .|+++++|+||.+.++......          .......+.   .+.+  
T Consensus       147 ---~-~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  220 (260)
T PRK06523        147 ---E-STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP--  220 (260)
T ss_pred             ---C-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc--
Confidence               0 011122344444433322       3799999999999887421100          000111111   1111  


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVT  302 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~~t  302 (401)
                             ...+..++|+|+++..++.+.. ...|+++.+.++...+
T Consensus       221 -------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        221 -------LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             -------cCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence                   1224478999999999997653 3557999999886544

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.53  E-value=6.2e-13  Score=123.20  Aligned_cols=198  Identities=19%  Similarity=0.183  Sum_probs=124.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+++||    ||+|+||++++++|+++|++|+++.++.+...          ..+...++.++.+|   .+++.++++
T Consensus         6 ~~k~~lIt----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~----------~~l~~~~~~~~~~Dl~~~~~~~~~~~   71 (255)
T PRK06463          6 KGKVALIT----GGTRGIGRAIAEAFLREGAKVAVLYNSAENEA----------KELREKGVFTIKCDVGNRDQVKKSKE   71 (255)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH----------HHHHhCCCeEEEecCCCHHHHHHHHH
Confidence            35899999    99999999999999999999998876543211          11111245666666   666666554


Q ss_pred             CC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||++|.                    |+.+    ++.+++.+++.+..++|++||...++....    
T Consensus        72 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----  147 (255)
T PRK06463         72 VVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE----  147 (255)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC----
Confidence            32     47999999984                    3344    455666666565568999999877643210    


Q ss_pred             CCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCC----CCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNN----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                       . ...+..+|.+.+.+.+.       .+++++.++||.+-.+...    ......+...+....+.         ..+.
T Consensus       148 -~-~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  216 (255)
T PRK06463        148 -G-TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL---------KTTG  216 (255)
T ss_pred             -C-ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCc---------CCCc
Confidence             0 01122345444333332       3789999999988654211    00001111122222221         2245


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .++|+|++++.++.+... .+|+++.+.+++
T Consensus       217 ~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        217 KPEDIANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             CHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            789999999999986654 567999998875

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.52  E-value=4.9e-13  Score=123.16  Aligned_cols=199  Identities=16%  Similarity=0.148  Sum_probs=123.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++++|||    ||+|+||++++++|+++|++|+++.+.. +....+       ..++.  ...+.++.+|   .+.+.+
T Consensus         5 ~~~~~lIt----G~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~~~~   73 (247)
T PRK12935          5 NGKVAIVT----GGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL-------VNELGKEGHDVYAVQADVSKVEDANR   73 (247)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH-------HHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            45899999    9999999999999999999998765533 221111       01111  1245667776   555665


Q ss_pred             hhcC-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCC
Q 015746          147 VVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++.     ..+|+|||+++.                    |+.++.++++++..    .+.++||++||...+....  
T Consensus        74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--  151 (247)
T PRK12935         74 LVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF--  151 (247)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC--
Confidence            5544     247999999984                    34556666666643    3445899999965432211  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                      +     ...+..+|.+.+.+.+    +   .++++++++||.+.++.... ...........+.         +.+.+.+
T Consensus       152 ~-----~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~  216 (247)
T PRK12935        152 G-----QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAKI---------PKKRFGQ  216 (247)
T ss_pred             C-----CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHhC---------CCCCCcC
Confidence            0     1112234554333322    2   28999999999997753221 1111111222211         2245789


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      ++|++++++.+++......|++||+.++.
T Consensus       217 ~edva~~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        217 ADEIAKGVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence            99999999999976543457999999874

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.52  E-value=2.9e-13  Score=123.76  Aligned_cols=193  Identities=17%  Similarity=0.239  Sum_probs=120.3

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhc--CCCeEEEcC---HhhHHHhhcC
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||||    |++|+||++++++|+++||+|++++|+..+ ...+.       ..+..  ..+.++.+|   .+++.+++..
T Consensus         1 vlIt----G~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   69 (239)
T TIGR01830         1 ALVT----GASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV-------EELKAYGVKALGVVCDVSDREDVKAVVEE   69 (239)
T ss_pred             CEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH-------HHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            6899    999999999999999999999999987521 11110       11111  135566666   5556665543


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccc-cccCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAG-IYKPADEPPHV  200 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~-vy~~~~~~~~~  200 (401)
                      .     ++|+|||++|.                    |+.++.++++++..    .+.++||++||.. +|+....    
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~----  145 (239)
T TIGR01830        70 IEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ----  145 (239)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC----
Confidence            2     47999999994                    34456667776654    4556899999964 5543221    


Q ss_pred             CCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ..+..+|.+.+.+...       .|+.++++||+.+.++.... ....+...+....+.         ..+.+++|
T Consensus       146 ----~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~  211 (239)
T TIGR01830       146 ----ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSEKVKKKILSQIPL---------GRFGTPEE  211 (239)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cChHHHHHHHhcCCc---------CCCcCHHH
Confidence                1122244433333222       38899999999886653221 112222233333222         12457899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ++++++.++..... ..|++||+.++
T Consensus       212 ~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       212 VANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            99999988865433 35789999765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.52  E-value=2.3e-13  Score=114.86  Aligned_cols=189  Identities=19%  Similarity=0.272  Sum_probs=129.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |||-|.    ||+|.+|++|+++++++||+|++++|++.+....             +++.+++.|   ++.+.+.+.++
T Consensus         1 mKIaiI----gAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------~~~~i~q~Difd~~~~a~~l~g~   63 (211)
T COG2910           1 MKIAII----GASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------QGVTILQKDIFDLTSLASDLAGH   63 (211)
T ss_pred             CeEEEE----ecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------ccceeecccccChhhhHhhhcCC
Confidence            789999    9999999999999999999999999999766421             256667776   66666778876


Q ss_pred             cccEEEeCCCCC--------hhhHHHHHHHHHhCCCCEEEEeccccc-ccCCCCCCCCCCCCCCCC----CChHH---HH
Q 015746          152 TFDVVLDNNGKN--------LDAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPD----AGHVQ---VE  215 (401)
Q Consensus       152 ~~d~Vv~~a~~~--------~~~~~~ll~aa~~~gv~~~v~~SS~~v-y~~~~~~~~~E~~~~~~~----~~~~~---~e  215 (401)
                        |+||..-+..        ......+++..+.+|+.|++.++.++- |-....  ...+.+.-|.    ..+.+   .+
T Consensus        64 --DaVIsA~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~--rLvD~p~fP~ey~~~A~~~ae~L~  139 (211)
T COG2910          64 --DAVISAFGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT--RLVDTPDFPAEYKPEALAQAEFLD  139 (211)
T ss_pred             --ceEEEeccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc--eeecCCCCchhHHHHHHHHHHHHH
Confidence              9999865532        334566888888899999999887652 222211  1111111111    01111   23


Q ss_pred             HHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCC-cccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEE
Q 015746          216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  294 (401)
Q Consensus       216 k~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~  294 (401)
                      .+..+..++||.|-|..++-|+...+       ...-|+. +..-..|   -++|+..|.|-+++..++++...+ +.|.
T Consensus       140 ~Lr~~~~l~WTfvSPaa~f~PGerTg-------~yrlggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~r-qRft  208 (211)
T COG2910         140 SLRAEKSLDWTFVSPAAFFEPGERTG-------NYRLGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIR-QRFT  208 (211)
T ss_pred             HHhhccCcceEEeCcHHhcCCccccC-------ceEeccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccc-eeee
Confidence            34445589999999999999965442       1122222 2222233   367899999999999999998876 6665


Q ss_pred             e
Q 015746          295 L  295 (401)
Q Consensus       295 ~  295 (401)
                      +
T Consensus       209 v  209 (211)
T COG2910         209 V  209 (211)
T ss_pred             e
Confidence            4

>PRK06398 aldose dehydrogenase; Validated

Probab=99.52  E-value=9.2e-13  Score=122.40  Aligned_cols=194  Identities=11%  Similarity=0.113  Sum_probs=122.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...                .+.++.+|   ++++.++++
T Consensus         5 ~gk~vlIt----Gas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----------------~~~~~~~D~~~~~~i~~~~~   64 (258)
T PRK06398          5 KDKVAIVT----GGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----------------DVDYFKVDVSNKEQVIKGID   64 (258)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCccccC----------------ceEEEEccCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999998764321                34555665   566665554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||++|.                    |+.++..+++++    ++.+..++|++||...+.....    
T Consensus        65 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  140 (258)
T PRK06398         65 YVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN----  140 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC----
Confidence            32     47999999983                    345555555544    4455568999999877643211    


Q ss_pred             CCCCCCCCCChHHHHHHHHH----h--CCCeEEEecCeeecCCCCCC-------cHHHHHHHHHcCCCcccCCCCcceee
Q 015746          201 EGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e----~--g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                         ...+..+|.+.+.+.+.    .  .++++.|+||.+..+.....       ....+.+....      ++.......
T Consensus       141 ---~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  211 (258)
T PRK06398        141 ---AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKR  211 (258)
T ss_pred             ---CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCC
Confidence               11223456655544433    2  37889999998866521100       00000000000      011111123


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..++|+|++++.++..... ..|+++.+.++.
T Consensus       212 ~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        212 VGKPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             CcCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            56799999999998876543 457888888774

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.52  E-value=3.8e-13  Score=126.29  Aligned_cols=141  Identities=20%  Similarity=0.203  Sum_probs=98.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+....           +...+++++.+|   .+++..+++.
T Consensus         4 ~k~vlIt----GasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-----------l~~~~~~~~~~Dl~d~~~~~~~~~~   68 (277)
T PRK05993          4 KRSILIT----GCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-----------LEAEGLEAFQLDYAEPESIAALVAQ   68 (277)
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-----------HHHCCceEEEccCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998754432           222356667777   5555555442


Q ss_pred             ------CcccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          151 ------VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       151 ------~~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                            .++|+|||++|.                    |+.+    ++++++.+++.+.++||++||...+.+...    
T Consensus        69 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----  144 (277)
T PRK05993         69 VLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKY----  144 (277)
T ss_pred             HHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCc----
Confidence                  148999999983                    2333    667888888888789999999765432110    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecC
Q 015746          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGS  236 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~  236 (401)
                         ...+..+|.+++.+.+       ..|+++++|+||.+..+
T Consensus       145 ---~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        145 ---RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence               0011224444444332       24899999999998765

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.52  E-value=5.6e-13  Score=123.52  Aligned_cols=205  Identities=12%  Similarity=0.185  Sum_probs=127.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+....+..    .+.. ....+.++.+|   .+++.+++
T Consensus         9 l~~k~vlVt----G~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~----~l~~-~~~~~~~~~~D~~~~~~i~~~~   79 (255)
T PRK06113          9 LDGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVVD----EIQQ-LGGQAFACRCDITSEQELSALA   79 (255)
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----HHHh-cCCcEEEEEccCCCHHHHHHHH
Confidence            446899999    999999999999999999999999987654322110    0000 01234556666   55555544


Q ss_pred             cCC-----cccEEEeCCCC-------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK-------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~-------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +..     ++|+|||+++.                   |+.++.++++++.    +.+..++|++||.........    
T Consensus        80 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  155 (255)
T PRK06113         80 DFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----  155 (255)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC----
Confidence            331     47999999983                   4556666777664    334458999999765422110    


Q ss_pred             CCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                         ...+..+|.+.+.+++.       .+++++++.||.+..+.......+.+...+.+..++.         .+..++|
T Consensus       156 ---~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d  223 (255)
T PRK06113        156 ---MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQD  223 (255)
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCC---------CCcCHHH
Confidence               11122344444443333       3788999999998766422211122223333332221         2347899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      +++++..++..... .+|+++++.++...
T Consensus       224 ~a~~~~~l~~~~~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        224 IANAALFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             HHHHHHHHcCccccCccCCEEEECCCccc
Confidence            99999999976543 45799999988543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.51  E-value=3e-13  Score=124.83  Aligned_cols=185  Identities=16%  Similarity=0.105  Sum_probs=114.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC-
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~-  150 (401)
                      |+|+||    ||+|+||.+++++|+++|++|++++|+.++...+..        ....++.++.+|   .+++.++++. 
T Consensus         1 ~~vlIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~i~~~~~~~   68 (248)
T PRK10538          1 MIVLVT----GATAGFGECITRRFIQQGHKVIATGRRQERLQELKD--------ELGDNLYIAQLDVRNRAAIEEMLASL   68 (248)
T ss_pred             CEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhccceEEEEecCCCHHHHHHHHHHH
Confidence            689999    999999999999999999999999998754332111        011246666776   5555555442 


Q ss_pred             ----CcccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 ----VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ----~~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                          .++|+|||++|.                     |+.+    ++.++.++++.+.++||++||...+.....     
T Consensus        69 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  143 (248)
T PRK10538         69 PAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-----  143 (248)
T ss_pred             HHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC-----
Confidence                147999999984                     1223    455666666777779999999765422110     


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                        ...+..+|.+.+.+...       .++.+++++||.+.|..........-....     ...+. +   ..++.++|+
T Consensus       144 --~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~-----~~~~~-~---~~~~~~~dv  212 (248)
T PRK10538        144 --GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA-----EKTYQ-N---TVALTPEDV  212 (248)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH-----Hhhcc-c---cCCCCHHHH
Confidence              00122244444443322       278899999999986632110000000000     00011 1   134689999


Q ss_pred             HHHHHHHhcCCCc
Q 015746          275 SSMLTLAVENPEA  287 (401)
Q Consensus       275 a~~~~~~~~~~~~  287 (401)
                      |++++.++..+..
T Consensus       213 A~~~~~l~~~~~~  225 (248)
T PRK10538        213 SEAVWWVATLPAH  225 (248)
T ss_pred             HHHHHHHhcCCCc
Confidence            9999999986654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.51  E-value=9.7e-13  Score=121.67  Aligned_cols=197  Identities=17%  Similarity=0.160  Sum_probs=124.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.++..             ...++.++.+|   .+++.+++.
T Consensus         5 ~~k~~lIt----Gas~gIG~~la~~l~~~g~~v~~~~r~~~~~~-------------~~~~~~~~~~D~~~~~~~~~~~~   67 (252)
T PRK07856          5 TGRVVLVT----GGTRGIGAGIARAFLAAGATVVVCGRRAPETV-------------DGRPAEFHAADVRDPDQVAALVD   67 (252)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCChhhhh-------------cCCceEEEEccCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999774310             01245566666   556666554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh-----CCCCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~-----~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|+|||++|.                    |+.++.++++++..     .+..+||++||...+.+...   
T Consensus        68 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---  144 (252)
T PRK07856         68 AIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG---  144 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC---
Confidence            32     47999999983                    45566667766543     23358999999776533211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHHh------CCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e~------g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          ...+..+|.+.+.+.+..      .+.+..++||.+..+...... .......+....+.         ..+..++
T Consensus       145 ----~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~  211 (252)
T PRK07856        145 ----TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL---------GRLATPA  211 (252)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC---------CCCcCHH
Confidence                011222444444433332      367888999998776321100 00111222222221         1234789


Q ss_pred             HHHHHHHHHhcCCC-cCCCcEEEecCCCCCC
Q 015746          273 DLSSMLTLAVENPE-AASSNIFNLVSDRAVT  302 (401)
Q Consensus       273 D~a~~~~~~~~~~~-~~~g~~~~~~~~~~~t  302 (401)
                      |+|+.++.++.... ..+|+.+.+.+|...+
T Consensus       212 ~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        212 DIAWACLFLASDLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             HHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence            99999999987654 3567999999876544

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.51  E-value=9.3e-13  Score=123.03  Aligned_cols=192  Identities=19%  Similarity=0.147  Sum_probs=118.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++|+||    ||+|+||++++++|+++|++|++++|+.++....             .+++++.+|   ++++.++++.
T Consensus         4 ~~~vlVt----Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~   66 (270)
T PRK06179          4 SKVALVT----GASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-------------PGVELLELDVTDDASVQAAVDE   66 (270)
T ss_pred             CCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-------------CCCeeEEeecCCHHHHHHHHHH
Confidence            4689999    9999999999999999999999999987543211             245666666   6667776654


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .     ++|+|||++|.                    |+.++.++++    .+++.+.++||++||...+.....   . 
T Consensus        67 ~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~-  142 (270)
T PRK06179         67 VIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY---M-  142 (270)
T ss_pred             HHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC---c-
Confidence            2     47999999994                    2334444444    456778889999999766543211   0 


Q ss_pred             CCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          202 GDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                         ..+..+|.+.+.+..       +.|+++++++||.+.++.....     ....+ ..... .......  .......
T Consensus       143 ---~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~--~~~~~~~  215 (270)
T PRK06179        143 ---ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERA-VVSKAVA--KAVKKAD  215 (270)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHH-HHHHHHH--hccccCC
Confidence               011224444444332       2489999999999987632211     00000 00000 0000000  0011234


Q ss_pred             eHHHHHHHHHHHhcCCCcCCCcEEEe
Q 015746          270 HVRDLSSMLTLAVENPEAASSNIFNL  295 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~~~g~~~~~  295 (401)
                      ..+|+|+.++.++..+..  +..|..
T Consensus       216 ~~~~va~~~~~~~~~~~~--~~~~~~  239 (270)
T PRK06179        216 APEVVADTVVKAALGPWP--KMRYTA  239 (270)
T ss_pred             CHHHHHHHHHHHHcCCCC--CeeEec
Confidence            789999999999987664  245543

>PLN02253 xanthoxin dehydrogenase

Probab=99.51  E-value=1.9e-13  Score=128.40  Aligned_cols=207  Identities=14%  Similarity=0.062  Sum_probs=126.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+|++|||    ||+|+||++++++|+++|++|++++|+.+....+..       ++. ..++.++.+|   .+++.++
T Consensus        16 l~~k~~lIt----Gas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~d~~~~~~~   84 (280)
T PLN02253         16 LLGKVALVT----GGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD-------SLGGEPNVCFFHCDVTVEDDVSRA   84 (280)
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-------HhcCCCceEEEEeecCCHHHHHHH
Confidence            346889999    999999999999999999999999987644322111       111 1245566666   6666665


Q ss_pred             hcCC-----cccEEEeCCCC----------------------ChhhHHHHHHHHHh----CCCCEEEEeccccc-ccCCC
Q 015746          148 VGGV-----TFDVVLDNNGK----------------------NLDAVRPVADWAKS----SGVKQFLFISSAGI-YKPAD  195 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~v-y~~~~  195 (401)
                      +...     ++|+|||++|.                      |+.++.++++++..    .+..++|++||... ++...
T Consensus        85 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~  164 (280)
T PLN02253         85 VDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG  164 (280)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC
Confidence            5531     47999999983                      34455566665543    23347899888654 33221


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-----cHHHHHHHH----HcCCCcccC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRI----VRKRPVPIP  259 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~----~~~~~~~~~  259 (401)
                      .        ..+..+|.+.+.+.+.       .++++..++||.+.++.....     .....+..+    ..+.+  +.
T Consensus       165 ~--------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~  234 (280)
T PLN02253        165 P--------HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN--LK  234 (280)
T ss_pred             C--------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC--Cc
Confidence            1        1123356555544433       278899999999987632110     001111111    11111  10


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHH
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~e  305 (401)
                            ...++++|+|++++.++.+... ..|+++++.+|...+..+
T Consensus       235 ------~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
T PLN02253        235 ------GVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNHS  275 (280)
T ss_pred             ------CCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhccch
Confidence                  1236899999999999876543 457899998876544433

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3.5e-13  Score=123.87  Aligned_cols=201  Identities=16%  Similarity=0.183  Sum_probs=124.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +.++||||    ||+|+||++++++|+++|++|+++.|+.+.. ..+..    .+.. ....+.++.+|   .+++.+++
T Consensus         4 ~~~~vlIt----G~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~~~   74 (245)
T PRK12937          4 SNKVAIVT----GASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVA----EIEA-AGGRAIAVQADVADAAAVTRLF   74 (245)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----HHHh-cCCeEEEEECCCCCHHHHHHHH
Confidence            35789999    9999999999999999999998887755321 11000    0111 11245666666   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +..     ++|+|||++|.                    |+.+..++++++.+.  ...+||++||...+.....     
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-----  149 (245)
T PRK12937         75 DAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG-----  149 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC-----
Confidence            532     47999999983                    455666667666543  2248999998765432211     


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                        ...+..+|.+.+.+++.       .++.+++++||.+..+..........+..+.+..+...         +.+++|+
T Consensus       150 --~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~  218 (245)
T PRK12937        150 --YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLER---------LGTPEEI  218 (245)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCC---------CCCHHHH
Confidence              01122355555544433       27889999999887653211111222334443333222         3378999


Q ss_pred             HHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          275 SSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       275 a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ++++..++.++.. .+|+++++.++
T Consensus       219 a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        219 AAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HHHHHHHcCccccCccccEEEeCCC
Confidence            9999998876543 45789998765

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.50  E-value=8.5e-13  Score=121.21  Aligned_cols=201  Identities=16%  Similarity=0.194  Sum_probs=124.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++||||    ||+|+||++++++|+++|++|+++.|+... ...+..    .... ....+.++.+|   .+.+.++++
T Consensus         2 ~k~vlIt----G~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~v~~~~~   72 (245)
T PRK12824          2 KKIALVT----GAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFE----EYGF-TEDQVRLKELDVTDTEECAEALA   72 (245)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH----Hhhc-cCCeEEEEEcCCCCHHHHHHHHH
Confidence            4689999    999999999999999999999999988531 110000    0000 11246677777   555555554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~----ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+++.                    |+.+..+    +++.+++.+.++||++||...+......   
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~---  149 (245)
T PRK12824         73 EIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQ---  149 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCC---
Confidence            31     47999999983                    3344444    4556666667799999998766432111   


Q ss_pred             CCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ..+..+|.+.+.+.+       ..++++++++|+.+.++..... .......+....+.         ..+..++|
T Consensus       150 ----~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~  215 (245)
T PRK12824        150 ----TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM-GPEVLQSIVNQIPM---------KRLGTPEE  215 (245)
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc-CHHHHHHHHhcCCC---------CCCCCHHH
Confidence                011223433222222       2378999999999987743221 11222222222222         22346899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +++++..++..... ..|+++++.++..
T Consensus       216 va~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        216 IAAAVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             HHHHHHHHcCccccCccCcEEEECCCee
Confidence            99999888865433 4579999998864

>PRK07069 short chain dehydrogenase; Validated

Probab=99.50  E-value=1.5e-13  Score=126.76  Aligned_cols=200  Identities=14%  Similarity=0.199  Sum_probs=121.7

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecC-CCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHhhcC
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +||||    ||+|+||+++++.|+++|++|++++|+ .+....+..    .+..... ..+..+.+|   .+++.++++.
T Consensus         1 ~ilVt----G~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (251)
T PRK07069          1 RAFIT----GAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAA----EINAAHGEGVAFAAVQDVTDEAQWQALLAQ   72 (251)
T ss_pred             CEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH----HHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence            48999    999999999999999999999999987 332221110    0000000 012234444   6666655543


Q ss_pred             C-----cccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .     ++|+|||+++.                    |+.    .+.+++.++++.+.++||++||...+......    
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~----  148 (251)
T PRK07069         73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY----  148 (251)
T ss_pred             HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC----
Confidence            2     37999999983                    223    67788888888777899999998876543211    


Q ss_pred             CCCCCCCCChHHHHHHHHH-------h--CCCeEEEecCeeecCCCCCCc----HHHHHHHHHcCCCcccCCCCcceeee
Q 015746          202 GDVVKPDAGHVQVEKYISE-------N--FSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~--g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                         ..+..+|.+.+.+.+.       .  +++++.++||.+.++......    .......+.++.+.         ..+
T Consensus       149 ---~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  216 (251)
T PRK07069        149 ---TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL---------GRL  216 (251)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCC---------CCC
Confidence               0122344444433322       2  377899999999887432100    00111122222221         224


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+++|++++++.++.++.. .+|+.+.+.++.
T Consensus       217 ~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        217 GEPDDVAHAVLYLASDESRFVTGAELVIDGGI  248 (251)
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEEEECCCe
Confidence            5789999999998876543 456777776653

>PRK08017 oxidoreductase; Provisional

Probab=99.50  E-value=4.8e-13  Score=123.82  Aligned_cols=183  Identities=19%  Similarity=0.147  Sum_probs=114.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||+++++.|+++|++|++++|+.++.+.+           ...+++.+.+|   .+++..+++.
T Consensus         2 ~k~vlVt----Gasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~   66 (256)
T PRK08017          2 QKSVLIT----GCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-----------NSLGFTGILLDLDDPESVERAADE   66 (256)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-----------HhCCCeEEEeecCCHHHHHHHHHH
Confidence            3689999    9999999999999999999999999987544321           11245566665   4443333321


Q ss_pred             ------CcccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          151 ------VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       151 ------~~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                            ..+|.+||++|.                    |+.++    ..+++.+++.+.+++|++||...+.....    
T Consensus        67 i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----  142 (256)
T PRK08017         67 VIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG----  142 (256)
T ss_pred             HHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC----
Confidence                  247999999984                    12222    34577777788789999999644322110    


Q ss_pred             CCCCCCCCCChHHHHHHH-------HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCC-CcccCCCCcceeeeeeHH
Q 015746          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~-------~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~  272 (401)
                         ...+..+|...+.+.       ...+++++++|||.+..+.         ...+..+. .......+...+.+++++
T Consensus       143 ---~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T PRK08017        143 ---RGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF---------TDNVNQTQSDKPVENPGIAARFTLGPE  210 (256)
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch---------hhcccchhhccchhhhHHHhhcCCCHH
Confidence               001122444444432       2248899999998875441         11111111 111122233335679999


Q ss_pred             HHHHHHHHHhcCCCc
Q 015746          273 DLSSMLTLAVENPEA  287 (401)
Q Consensus       273 D~a~~~~~~~~~~~~  287 (401)
                      |+++.+..+++++..
T Consensus       211 d~a~~~~~~~~~~~~  225 (256)
T PRK08017        211 AVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999987765

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.4e-13  Score=125.49  Aligned_cols=187  Identities=16%  Similarity=0.180  Sum_probs=115.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||+++++.|+++|++|++++|+..+...+..    .+... ..++.++.+|   .+.+..+++.
T Consensus         1 ~~~vlVt----Gasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~----~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          1 GKVVIIT----GASEGIGRALAVRLARAGAQLVLAARNETRLASLAQ----ELADH-GGEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CCEEEEe----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCcEEEEEccCCCHHHHHHHHHH
Confidence            4689999    999999999999999999999999998654332110    01111 1245666666   5556655553


Q ss_pred             C-----cccEEEeCCCC---------------------ChhhHHHHHHHHHh---CCCCEEEEecccccccCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~---~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .     ++|+|||+++.                     |+.++.++++.+..   .+.+++|++||...+......    
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----  147 (263)
T PRK06181         72 AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTR----  147 (263)
T ss_pred             HHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCc----
Confidence            2     47999999983                     34455666666642   234689999998776432110    


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                         ..+..+|.+.+.+.+.       .++++++++||.+..+.....     +.  ..+.+..  ..+.+...+++++|+
T Consensus       148 ---~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-----~~--~~~~~~~--~~~~~~~~~~~~~dv  215 (263)
T PRK06181        148 ---SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA-----LD--GDGKPLG--KSPMQESKIMSAEEC  215 (263)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh-----cc--ccccccc--cccccccCCCCHHHH
Confidence               0011233333333222       378999999999877632210     00  0111111  112222468999999


Q ss_pred             HHHHHHHhcCC
Q 015746          275 SSMLTLAVENP  285 (401)
Q Consensus       275 a~~~~~~~~~~  285 (401)
                      |++++.+++..
T Consensus       216 a~~i~~~~~~~  226 (263)
T PRK06181        216 AEAILPAIARR  226 (263)
T ss_pred             HHHHHHHhhCC
Confidence            99999999864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.50  E-value=8.1e-13  Score=121.33  Aligned_cols=197  Identities=15%  Similarity=0.143  Sum_probs=120.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++++|||    ||+|+||++++++|+++|+.|++..|+.++.+.+..       .+ ..++.++.+|   .+++.++++
T Consensus         5 ~~~~vlIt----Ga~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T PRK12936          5 SGRKALVT----GASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA-------EL-GERVKIFPANLSDRDEVKALGQ   72 (245)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-------Hh-CCceEEEEccCCCHHHHHHHHH
Confidence            45799999    999999999999999999999888887654332110       11 1245666666   555555443


Q ss_pred             C-----CcccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEeccccc-ccCCCCCCC
Q 015746          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGI-YKPADEPPH  199 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~v-y~~~~~~~~  199 (401)
                      .     .++|+|||+++.                    |+.+..++++++.    +.+.++||++||... ++.....  
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~--  150 (245)
T PRK12936         73 KAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQA--  150 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCc--
Confidence            2     147999999983                    3445555555543    345568999999654 4332211  


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                            .+..+|.+.+.+.+       ..++++++++||.+..+.... .....-..+....+         ...+.+++
T Consensus       151 ------~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~  214 (245)
T PRK12936        151 ------NYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDKQKEAIMGAIP---------MKRMGTGA  214 (245)
T ss_pred             ------chHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChHHHHHHhcCCC---------CCCCcCHH
Confidence                  12224443322222       237999999999886653211 00111111111111         12245799


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      |+++++..++..... .+|+++++.++.
T Consensus       215 ~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        215 EVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            999999888865543 457999998774

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.50  E-value=6.9e-13  Score=122.47  Aligned_cols=198  Identities=12%  Similarity=0.162  Sum_probs=123.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++||||    ||+|+||+++++.|+++|++|+++.+... ....+.       ..+ ..++.++.+|   ++++.++++
T Consensus         5 ~k~ilIt----Gas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~   72 (253)
T PRK08642          5 EQTVLVT----GGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA-------DEL-GDRAIALQADVTDREQVQAMFA   72 (253)
T ss_pred             CCEEEEe----CCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHHH
Confidence            4789999    99999999999999999999988765432 211110       011 1256666776   566666554


Q ss_pred             CC------cccEEEeCCCC--------------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccC
Q 015746          150 GV------TFDVVLDNNGK--------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       150 ~~------~~d~Vv~~a~~--------------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~  193 (401)
                      ..      ++|+|||+++.                          |+.+..++++++.    +.+..++|++||...+..
T Consensus        73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  152 (253)
T PRK08642         73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP  152 (253)
T ss_pred             HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC
Confidence            42      27999999863                          2445566666654    345568999998644321


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                      .  .+.     ..+..+|.+.+.+++.       .++++..|+||.+..+.............+....+.         .
T Consensus       153 ~--~~~-----~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~  216 (253)
T PRK08642        153 V--VPY-----HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPL---------R  216 (253)
T ss_pred             C--CCc-----cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCc---------C
Confidence            1  011     1223355555554444       278899999999876532111111222222222221         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      .+.+++|+++++..++.... ..+|+++.+.++.
T Consensus       217 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        217 KVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             CCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            36789999999999998654 3567999888764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.8e-13  Score=126.26  Aligned_cols=206  Identities=12%  Similarity=0.186  Sum_probs=127.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++.+|||    ||+|.||++++++|+++|++|++++|+.++...+..    .+......++.++.+|   ++++.++++
T Consensus         7 ~~k~~lIt----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          7 SGKLAFTT----ASSKGIGFGVARVLARAGADVILLSRNEENLKKARE----KIKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998754432111    0111112246666776   555665554


Q ss_pred             CC----cccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          150 GV----TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       150 ~~----~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      ..    ++|++||++|.                    |    +..++.++..+++.+..++|++||...+......    
T Consensus        79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~----  154 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNI----  154 (263)
T ss_pred             HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcc----
Confidence            21    47999999984                    1    2345667777777766799999998765322110    


Q ss_pred             CCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCC----------cHHHHHHHHHcCCCcccCCCCcc
Q 015746          202 GDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                         ..+..+|.+.+.+.+    |   +|+++..|.||.+..+.....          ......+.+....|.        
T Consensus       155 ---~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------  223 (263)
T PRK08339        155 ---ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL--------  223 (263)
T ss_pred             ---hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc--------
Confidence               111123444333222    2   379999999999866521000          001111111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                       ..+..++|+|.++..++.+... .+|+++.+.++..++
T Consensus       224 -~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        224 -GRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             -ccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence             2245789999999999876543 567999998876554

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.49  E-value=6e-13  Score=122.62  Aligned_cols=201  Identities=14%  Similarity=0.123  Sum_probs=124.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+...  ....    ....+ ...+.++.+|   .+++..++
T Consensus         3 ~~~k~vlIt----Gas~gIG~~ia~~l~~~G~~vi~~~r~~~~--~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~   71 (248)
T TIGR01832         3 LEGKVALVT----GANTGLGQGIAVGLAEAGADIVGAGRSEPS--ETQQ----QVEAL-GRRFLSLTADLSDIEAIKALV   71 (248)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCchHH--HHHH----HHHhc-CCceEEEECCCCCHHHHHHHH
Confidence            346899999    999999999999999999999999986521  1000    01111 1245667777   55555544


Q ss_pred             cC-----CcccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCCCCC
Q 015746          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +.     .++|+|||++|.                    |+.+..++++++.    +.+ .+++|++||...|.+.... 
T Consensus        72 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-  150 (248)
T TIGR01832        72 DSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV-  150 (248)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC-
Confidence            32     148999999983                    4455555666553    333 4589999998877543211 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcH-HHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                            ..+..+|.+.+.+.+.       .|+++++++||.+..+....... ......+....         ....++.
T Consensus       151 ------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  215 (248)
T TIGR01832       151 ------PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERI---------PAGRWGT  215 (248)
T ss_pred             ------chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcC---------CCCCCcC
Confidence                  1122355554443322       28999999999998764221000 00011111111         1135678


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ++|+|++++.++..... ..|+++.+.++.
T Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       216 PDDIGGPAVFLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             HHHHHHHHHHHcCccccCcCCcEEEeCCCE
Confidence            99999999999986543 456888877653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.49  E-value=6.3e-13  Score=123.29  Aligned_cols=206  Identities=17%  Similarity=0.159  Sum_probs=127.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++. ++.       .++.  ..++.++.+|   .+++.+
T Consensus         5 l~~~~ilIt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   72 (258)
T PRK08628          5 LKDKVVIVT----GGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFA-------EELRALQPRAEFVQVDLTDDAQCRD   72 (258)
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHH-------HHHHhcCCceEEEEccCCCHHHHHH
Confidence            346799999    9999999999999999999999999887543 110       1111  1245667777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC-------------------ChhhHHHHHHHHHh---CCCCEEEEecccccccCCCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK-------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~-------------------~~~~~~~ll~aa~~---~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +++..     ++|+|||++|.                   |+.+..++.+.+..   .+.++||++||...+....    
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----  148 (258)
T PRK08628         73 AVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG----  148 (258)
T ss_pred             HHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC----
Confidence            55532     47999999993                   23444455555432   2335899999976553221    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                         ....+..+|.+.+.+.+.       .+++++.|+||.++++.....     ........+....+.   +     ..
T Consensus       149 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~  217 (258)
T PRK08628        149 ---GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPL---G-----HR  217 (258)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCc---c-----cc
Confidence               111122345444444433       378999999999998742110     000011111111111   1     13


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHH
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~e  305 (401)
                      ++.++|+|++++.++..... .+|+.+.+.++. ..+++
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~-~~~~~  255 (258)
T PRK08628        218 MTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY-VHLDR  255 (258)
T ss_pred             CCCHHHHHHHHHHHhChhhccccCceEEecCCc-ccccc
Confidence            56889999999999987643 456888887664 44444

>PRK06196 oxidoreductase; Provisional

Probab=99.49  E-value=2.1e-12  Score=123.54  Aligned_cols=201  Identities=15%  Similarity=0.101  Sum_probs=119.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++.....       .++  .++.++.+|   .+++.+++
T Consensus        24 l~~k~vlIT----GasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~-------~~l--~~v~~~~~Dl~d~~~v~~~~   90 (315)
T PRK06196         24 LSGKTAIVT----GGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL-------AGI--DGVEVVMLDLADLESVRAFA   90 (315)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh--hhCeEEEccCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875433211       111  136667777   55555554


Q ss_pred             cC-----CcccEEEeCCCC------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          149 GG-----VTFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       149 ~~-----~~~d~Vv~~a~~------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +.     .++|+|||+||.                  |+.+    ++.++..+++.+..++|++||.+.+...  ..+.+
T Consensus        91 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~--~~~~~  168 (315)
T PRK06196         91 ERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP--IRWDD  168 (315)
T ss_pred             HHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC--CCccc
Confidence            32     247999999983                  2333    4556666666665699999997643221  11111


Q ss_pred             ---CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHH-HHHcCCCcccCCCCcce
Q 015746          202 ---GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       202 ---~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  265 (401)
                         ..+. +....|+..|...+            .|+++++|+||.+.++............ ........++ .     
T Consensus       169 ~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-----  241 (315)
T PRK06196        169 PHFTRGY-DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPI-D-----  241 (315)
T ss_pred             cCccCCC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhh-h-----
Confidence               1111 11234665554322            3799999999999988532210000000 0000000000 0     


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEE
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFN  294 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~  294 (401)
                      ..+..++|+|..++.++..+.. ..++.|.
T Consensus       242 ~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~  271 (315)
T PRK06196        242 PGFKTPAQGAATQVWAATSPQLAGMGGLYC  271 (315)
T ss_pred             hhcCCHhHHHHHHHHHhcCCccCCCCCeEe
Confidence            0134689999999998876543 2234453

>PRK07985 oxidoreductase; Provisional

Probab=99.49  E-value=1.8e-12  Score=122.82  Aligned_cols=203  Identities=16%  Similarity=0.160  Sum_probs=124.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC--cccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .+++++|||    ||+|+||++++++|+++|++|+++.|+...  .+.+..    .... ....+.++.+|   .+++.+
T Consensus        47 ~~~k~vlIT----Gas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~  117 (294)
T PRK07985         47 LKDRKALVT----GGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKK----IIEE-CGRKAVLLPGDLSDEKFARS  117 (294)
T ss_pred             cCCCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHH----HHHH-cCCeEEEEEccCCCHHHHHH
Confidence            345899999    999999999999999999999988765422  111100    0000 01234556666   555555


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +++..     ++|++||+++.                     |+.++.++++++...  .-.+||++||...+...... 
T Consensus       118 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~-  196 (294)
T PRK07985        118 LVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHL-  196 (294)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCc-
Confidence            44332     37999999883                     455666777766542  12489999998877543110 


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                            ..+..+|.+++.+.+    +   .|+++.+|+||+++++.... .........+....+.         ..+..
T Consensus       197 ------~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~r~~~  261 (294)
T PRK07985        197 ------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM---------KRAGQ  261 (294)
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC---------CCCCC
Confidence                  112224444333222    2   38999999999999884211 1111122222222222         12347


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ++|+|.+++.++..... ..|+++.+.+|.
T Consensus       262 pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        262 PAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            89999999999976543 457899988875

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.3e-12  Score=119.36  Aligned_cols=203  Identities=14%  Similarity=0.132  Sum_probs=123.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..++++|||    ||+|+||++++++|+++|++|++++|+.+.. +.+       ..++.  ..++.++.+|   .+++.
T Consensus         6 ~~~k~~lVt----G~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~i~   74 (254)
T PRK06114          6 LDGQVAFVT----GAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAET-------AEHIEAAGRRAIQIAADVTSKADLR   74 (254)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHH-------HHHHHhcCCceEEEEcCCCCHHHHH
Confidence            346899999    9999999999999999999999999876421 111       01111  1235556666   55555


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++...     ++|+|||++|.                    |+.++    +.++..+++.+.++||++||...+.....
T Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  154 (254)
T PRK06114         75 AAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG  154 (254)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC
Confidence            555432     37999999983                    34444    34444555556568999999764422211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                      .+     ...+..+|.+.+.+.+.       .|+++.+|+||.+.++.............+....|+.         -+.
T Consensus       155 ~~-----~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~---------r~~  220 (254)
T PRK06114        155 LL-----QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQ---------RMA  220 (254)
T ss_pred             CC-----cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCC---------CCc
Confidence            00     01122244433332222       3899999999999887432110111122222222221         234


Q ss_pred             eHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      .++|++..++.++.+.. ...|+++.+.+|.
T Consensus       221 ~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        221 KVDEMVGPAVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             CHHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence            78999999999887644 3567999888764

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.49  E-value=9.3e-13  Score=122.05  Aligned_cols=202  Identities=17%  Similarity=0.170  Sum_probs=122.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|+++.|+.++.+.+...    +.. ...++.++.+|   .+++.+++
T Consensus         7 ~~~k~ilIt----Gasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~~~~~~   77 (258)
T PRK06949          7 LEGKVALVT----GASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAE----IEA-EGGAAHVVSLDVTDYQSIKAAV   77 (258)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEecCCCHHHHHHHH
Confidence            456899999    9999999999999999999999999987654322110    000 01245666666   55666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC--------CCEEEEecccccc
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG--------VKQFLFISSAGIY  191 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g--------v~~~v~~SS~~vy  191 (401)
                      +..     ++|+|||+++.                    |+.+..++++++.    +..        ..++|++||...+
T Consensus        78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  157 (258)
T PRK06949         78 AHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL  157 (258)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence            432     47999999983                    3444455555443    222        2489999998765


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                      .....       ...+..+|.+.+.+.+.       .++++++|+||+++++.............+....+.        
T Consensus       158 ~~~~~-------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--------  222 (258)
T PRK06949        158 RVLPQ-------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPR--------  222 (258)
T ss_pred             CCCCC-------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCC--------
Confidence            43210       00011233333222222       379999999999998854321111111112111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSD  298 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~  298 (401)
                       ..+...+|+++++..++.... ..+|+++.+.++
T Consensus       223 -~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        223 -KRVGKPEDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             -CCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence             123467999999999988654 355788877765

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.9e-13  Score=125.40  Aligned_cols=194  Identities=14%  Similarity=0.019  Sum_probs=114.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||++++++|+++|++|++++|+.++...+...    .. ....++.++.+|   ++++.+++..
T Consensus         2 ~~~vlVt----Gasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~~   72 (257)
T PRK09291          2 SKTILIT----GAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAE----AA-RRGLALRVEKLDLTDAIDRAQAAEW   72 (257)
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcceEEEeeCCCHHHHHHHhcC
Confidence            4689999    9999999999999999999999999976443221100    00 001245566666   6667776653


Q ss_pred             CcccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCC
Q 015746          151 VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~  206 (401)
                       ++|+|||+++.                    |+.    .++.++..+++.+.++||++||...+.....       ...
T Consensus        73 -~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~-------~~~  144 (257)
T PRK09291         73 -DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF-------TGA  144 (257)
T ss_pred             -CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC-------cch
Confidence             57999999983                    222    2344556666777789999999754322110       011


Q ss_pred             CCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCC-cccCCCCcceeeeeeHHHHHHHH
Q 015746          207 PDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       207 ~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      +..+|.+.+.+..       ..|+++++||||.+..+.... ....+......... +.. .+......+++.+|++..+
T Consensus       145 Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  222 (257)
T PRK09291        145 YCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT-MAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAM  222 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh-hhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHH
Confidence            2235555554332       248999999999875432111 00000000000000 110 1111223456899999999


Q ss_pred             HHHhcCCC
Q 015746          279 TLAVENPE  286 (401)
Q Consensus       279 ~~~~~~~~  286 (401)
                      +.++..+.
T Consensus       223 ~~~l~~~~  230 (257)
T PRK09291        223 VEVIPADT  230 (257)
T ss_pred             HHHhcCCC
Confidence            88887654

>PRK08643 acetoin reductase; Validated

Probab=99.48  E-value=1.5e-12  Score=120.58  Aligned_cols=205  Identities=16%  Similarity=0.169  Sum_probs=120.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ++++|||    ||+|+||+++++.|+++|++|++++|+.+....+..    .+... ..++.++.+|   ++.+.++++.
T Consensus         2 ~k~~lIt----Gas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   72 (256)
T PRK08643          2 SKVALVT----GAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAAD----KLSKD-GGKAIAVKADVSDRDQVFAAVRQ   72 (256)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCeEEEEECCCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998754432211    00000 1245566666   5555555543


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCC-CCEEEEecccccccCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSG-VKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~g-v~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      .     ++|+|||++|.                    |+.++..+++    .+++.+ -.++|++||...+.....    
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  148 (256)
T PRK08643         73 VVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE----  148 (256)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC----
Confidence            2     47999999984                    2333333333    333333 248999999764322111    


Q ss_pred             CCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc--CCCcc----cCCCCcceee
Q 015746          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVP----IPGSGMQFTN  267 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~  267 (401)
                         ...+..+|.+.+.+.+.       .|++++.|+||.+.++....     +......  +.+..    .+-.......
T Consensus       149 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (256)
T PRK08643        149 ---LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD-----IAHQVGENAGKPDEWGMEQFAKDITLGR  220 (256)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH-----HHhhhccccCCCchHHHHHHhccCCCCC
Confidence               01122345544433322       37899999999998763110     0110000  00000    0000001112


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +...+|+|.++..++..... .+|+++.+.++.
T Consensus       221 ~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        221 LSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            45789999999999876544 567999888764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.48  E-value=1.5e-12  Score=120.79  Aligned_cols=202  Identities=19%  Similarity=0.234  Sum_probs=124.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||..++++|+++|++|+++.|+ ++...+..    .+... ...+.++.+|   .+++..++
T Consensus        13 l~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935         13 LDGKVAIVT----GGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRR----LIEKE-GRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHH----HHHhc-CCceEEEEcCCCCHHHHHHHH
Confidence            456899999    999999999999999999999999987 32221110    00111 1246677777   55555555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+++.                    |+.+.    +.++..+++.+.+++|++||...+......  
T Consensus        83 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--  160 (258)
T PRK06935         83 KEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV--  160 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc--
Confidence            432     47999999983                    33443    344455555566789999998776432111  


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                           ..+..+|.+.+.+.+.       .|+++++|+||.+..+...... .......+....+.         ..+..+
T Consensus       161 -----~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  226 (258)
T PRK06935        161 -----PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA---------GRWGEP  226 (258)
T ss_pred             -----hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCC---------CCCCCH
Confidence                 1122345544443322       3799999999998776321100 00111122221111         234578


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|++..+..++.+... ..|+++.+.++.
T Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        227 DDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            9999999998876543 457899888774

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2.2e-12  Score=119.69  Aligned_cols=203  Identities=13%  Similarity=0.188  Sum_probs=123.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|++|||    ||+|+||++++++|+++|++|+++.+... ....+..    .+.. ....+.++.+|   .+++.+++
T Consensus         8 ~~k~vlIt----Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~d~~~~~~~~   78 (258)
T PRK09134          8 APRAALVT----GAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAA----EIRA-LGRRAVALQADLADEAEVRALV   78 (258)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH----HHHh-cCCeEEEEEcCCCCHHHHHHHH
Confidence            35789999    99999999999999999999988876532 2211100    0000 01245667776   55565555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----CCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||++|.                    |+.++.++++++...    +.+++|+++|...+.....   
T Consensus        79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~---  155 (258)
T PRK09134         79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD---  155 (258)
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC---
Confidence            432     47999999983                    466667777766543    3357898888655432210   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH----h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e----~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ...+..+|.+++.+.+.    .  .+.++.++||.++......  ...+ .......+.   +      ...+++|
T Consensus       156 ----~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~-~~~~~~~~~---~------~~~~~~d  219 (258)
T PRK09134        156 ----FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDF-ARQHAATPL---G------RGSTPEE  219 (258)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHH-HHHHhcCCC---C------CCcCHHH
Confidence                00122244443333322    2  3788999999887653211  1122 222222221   1      1257999


Q ss_pred             HHHHHHHHhcCCCcCCCcEEEecCCCCCCHH
Q 015746          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (401)
Q Consensus       274 ~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~  304 (401)
                      +|++++.+++.+. .+|+.|++.++..++++
T Consensus       220 ~a~~~~~~~~~~~-~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        220 IAAAVRYLLDAPS-VTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HHHHHHHHhcCCC-cCCCEEEECCCeecccc
Confidence            9999999998654 34689999987654443

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=5.5e-12  Score=115.22  Aligned_cols=193  Identities=15%  Similarity=0.144  Sum_probs=124.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhh-HHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE-VGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~-~~~~~~~~  151 (401)
                      ++++++||    ||+|+||++++++|+++|++|++++|+.....              ..++.++.+|..+ ++++++..
T Consensus         4 ~~k~~lVt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~   65 (235)
T PRK06550          4 MTKTVLIT----GAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------------SGNFHFLQLDLSDDLEPLFDWV   65 (235)
T ss_pred             CCCEEEEc----CCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------------CCcEEEEECChHHHHHHHHHhh
Confidence            45789999    99999999999999999999999998753211              1246677788433 45555443


Q ss_pred             -cccEEEeCCCC---------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCCCCCCC
Q 015746          152 -TFDVVLDNNGK---------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (401)
Q Consensus       152 -~~d~Vv~~a~~---------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~  205 (401)
                       ++|+|||+++.                     |+.++.++++++.    +.+..+||++||...+.....       ..
T Consensus        66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------~~  138 (235)
T PRK06550         66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG-------GA  138 (235)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-------Cc
Confidence             47999999983                     3445555555553    344468999999765432211       11


Q ss_pred             CCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcH-HHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          206 KPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       206 ~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      .+..+|.+.+.+.+.       .|+++++++||.+.++.....+. ..+...+....+.         ..+...+|+|++
T Consensus       139 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~  209 (235)
T PRK06550        139 AYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPI---------KRWAEPEEVAEL  209 (235)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCc---------CCCCCHHHHHHH
Confidence            122355554443322       38999999999998875432211 1112222222221         224578999999


Q ss_pred             HHHHhcCCC-cCCCcEEEecCCC
Q 015746          278 LTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       278 ~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      ++.++.+.. ...|+++.+.++.
T Consensus       210 ~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        210 TLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             HHHHcChhhccCCCcEEEECCce
Confidence            999997654 3457888888763

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=2e-12  Score=118.75  Aligned_cols=200  Identities=17%  Similarity=0.173  Sum_probs=121.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++++||||    ||+|+||++++++|+++|++|+++ +|+.++...+..    .+.. ....+.++.+|   ++++.+++
T Consensus         4 ~~~~ilI~----Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T PRK05565          4 MGKVAIVT----GASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLE----EIKE-EGGDAIAVKADVSSEEDVENLV   74 (247)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHh-cCCeEEEEECCCCCHHHHHHHH
Confidence            46799999    999999999999999999999998 887644322110    0000 11246667777   55555555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCC-CCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPA-DEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~-~~~~  198 (401)
                      ...     ++|+|||++|.                    |+.+..++++++    .+.+.++||++||...+... ...+
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~  154 (247)
T PRK05565         75 EQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVL  154 (247)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccH
Confidence            422     47999999984                    334444444444    44556789999997654322 1111


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                              +..+|.+.+.++.       +.|++++++|||.+..+...... ......+....         ....+..+
T Consensus       155 --------y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~-~~~~~~~~~~~---------~~~~~~~~  216 (247)
T PRK05565        155 --------YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS-EEDKEGLAEEI---------PLGRLGKP  216 (247)
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC-hHHHHHHHhcC---------CCCCCCCH
Confidence                    1113322222221       23899999999998765432211 11111111111         11235588


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|+++.++.++..... .+|+++++.++.
T Consensus       217 ~~va~~~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        217 EEIAKVVLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence            9999999999877654 467899988764

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.6e-12  Score=121.05  Aligned_cols=200  Identities=14%  Similarity=0.190  Sum_probs=121.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++++|||    ||+|.||++++++|+++|++|++++|+.++...+..       ++ ..++.++.+|   .+++.++++
T Consensus         5 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~Dl~~~~~~~~~~~   72 (261)
T PRK08265          5 AGKVAIVT----GGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA-------SL-GERARFIATDITDDAAIERAVA   72 (261)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hh-CCeeEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998754332111       11 1246666776   555665554


Q ss_pred             CC-----cccEEEeCCCC-------------------ChhhHHHHHHHHHh---CCCCEEEEecccccccCCCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK-------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~-------------------~~~~~~~ll~aa~~---~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      ..     ++|++||++|.                   |+.+...+++++..   .+-.++|++||...+.....      
T Consensus        73 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------  146 (261)
T PRK08265         73 TVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG------  146 (261)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------
Confidence            32     47999999984                   34444444444332   23358999999765422111      


Q ss_pred             CCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                       ...+..+|.+.+.+.+.       .|++++.|+||.+..+.....  ......+.+...  .      .....+..++|
T Consensus       147 -~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~--~------~p~~r~~~p~d  217 (261)
T PRK08265        147 -RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP--F------HLLGRVGDPEE  217 (261)
T ss_pred             -CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc--c------CCCCCccCHHH
Confidence             11122345444433322       378999999998866521100  000001111110  0      01112457899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|+++..++..... .+|+++.+.++.
T Consensus       218 va~~~~~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        218 VAQVVAFLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHHHHHHHcCccccCccCcEEEECCCe
Confidence            99999999986543 467899888774

>PRK09242 tropinone reductase; Provisional

Probab=99.47  E-value=2e-12  Score=119.93  Aligned_cols=203  Identities=13%  Similarity=0.215  Sum_probs=127.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+|++|||    ||+|.||+.++++|+++|++|++++|+.+....+..    .+... ...++.++.+|   .+++..++
T Consensus         8 ~~k~~lIt----Ga~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          8 DGQTALIT----GASKGIGLAIAREFLGLGADVLIVARDADALAQARD----ELAEEFPEREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            46899999    999999999999999999999999998754332111    00000 01245566666   45554444


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||++|.                    |+.+..++++++    ++.+.++||++||...+.+....  
T Consensus        80 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~--  157 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG--  157 (257)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC--
Confidence            321     47999999984                    445555666655    44555789999998766433211  


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                           ..+..+|.+.+.+++.       .+++++.++||.+.++..... ....+........+...         +...
T Consensus       158 -----~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  223 (257)
T PRK09242        158 -----APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRR---------VGEP  223 (257)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCC---------CcCH
Confidence                 1122355554444332       379999999999988753211 11222333333333222         2367


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|++.++..++..... .+|+++.+.++.
T Consensus       224 ~~va~~~~~l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        224 EEVAAAVAFLCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             HHHHHHHHHHhCcccccccCCEEEECCCe
Confidence            9999999998875433 456888887653

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.46  E-value=2.2e-12  Score=119.42  Aligned_cols=203  Identities=13%  Similarity=0.094  Sum_probs=123.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .++++|||    ||+|.||.+++++|+++|++|++++|+.++.+.+..    .+... ..++.++.+|   ++++.++++
T Consensus         5 ~~k~~lIt----Gas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T PRK07478          5 NGKVAIIT----GASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVA----EIRAE-GGEAVALAGDVRDEAYAKALVA   75 (254)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCcEEEEEcCCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998755432211    01110 1245566666   555555554


Q ss_pred             CC-----cccEEEeCCCC---------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK---------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~---------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|++||++|.                     |+    ..++.++..+++.+..++|++||...+....  + 
T Consensus        76 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~--~-  152 (254)
T PRK07478         76 LAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF--P-  152 (254)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC--C-
Confidence            21     48999999984                     22    2334456666666667899999976653210  0 


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                         ....+..+|.+.+.+.+.       .|+.++.|+||.+-.+.... .........+....+.         ..+..+
T Consensus       153 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  220 (254)
T PRK07478        153 ---GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHAL---------KRMAQP  220 (254)
T ss_pred             ---CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCC---------CCCcCH
Confidence               011122345444333322       27899999999997662111 0001111111111111         124578


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|+|+.++.++.+... .+|+++.+.++.
T Consensus       221 ~~va~~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        221 EEIAQAALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHHHHHHHHcCchhcCCCCCeEEeCCch
Confidence            9999999999876543 457899888764

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.46  E-value=2.2e-12  Score=120.20  Aligned_cols=203  Identities=13%  Similarity=0.189  Sum_probs=122.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.++...+..    .+.. ...++.++.+|   .+.+.+++
T Consensus         8 ~~~~~vlIt----GasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~----~l~~-~~~~~~~~~~D~~~~~~~~~~~   78 (263)
T PRK07814          8 LDDQVAVVT----GAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAE----QIRA-AGRRAHVVAADLAHPEATAGLA   78 (263)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCcEEEEEccCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998754332111    0000 01245566666   55565555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh-----CCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS-----SGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~-----~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+|+.                    |+.++.++++++..     .+.++||++||........  +
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~  156 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR--G  156 (263)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC--C
Confidence            432     47999999983                    45667788887753     4556899999965332110  0


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHh------CCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e~------g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                           ...+..+|.+++.+.+..      .+.++.|+||.+..+..... .-..+...+....+.         ..+..+
T Consensus       157 -----~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  222 (263)
T PRK07814        157 -----FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPL---------RRLGDP  222 (263)
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCC---------CCCcCH
Confidence                 011222344433333332      46788899998865521100 001111122111111         123478


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|+|++++.++.+... ..|+.+.+.++.
T Consensus       223 ~~va~~~~~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        223 EDIAAAAVYLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             HHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            9999999999976533 456888887653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.46  E-value=1.9e-12  Score=119.76  Aligned_cols=200  Identities=18%  Similarity=0.198  Sum_probs=123.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .++++|||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+..+.+|   .+++.++
T Consensus         8 ~~k~~lIt----Gas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~~   76 (254)
T PRK08085          8 AGKNILIT----GSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-------AKLRQEGIKAHAAPFNVTHKQEVEAA   76 (254)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-------HHHHhcCCeEEEEecCCCCHHHHHHH
Confidence            46889999    99999999999999999999999999865433211       1111  1134455555   5555555


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +...     ++|+|||++|.                    |+.+..+++++    +++.+..+||++||.........  
T Consensus        77 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--  154 (254)
T PRK08085         77 IEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT--  154 (254)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC--
Confidence            5431     47999999983                    23344444444    33445568999999754321110  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                           ...+..+|.+.+.+.+.       .|++++.|+||.+.++...... ...+...+....+.         ..+..
T Consensus       155 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~  220 (254)
T PRK08085        155 -----ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA---------ARWGD  220 (254)
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC---------CCCcC
Confidence                 11122355554444433       3899999999999887432110 01122222222222         22457


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+|++.++..++..... .+|+++.+.++.
T Consensus       221 ~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        221 PQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            89999999998886543 567888888764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.46  E-value=2.8e-12  Score=118.78  Aligned_cols=203  Identities=12%  Similarity=0.172  Sum_probs=126.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++|+||    ||+|+||+.++++|+++|++|++++|+.+....+..    .+.. ...++.++.+|   .+++.+++
T Consensus         9 ~~~k~ilIt----Gas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124          9 LAGQVALVT----GSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVA----ALRA-AGGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH----HHHh-cCCceEEEEccCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998754332110    0000 01235666666   55555555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHH----HHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll----~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+++.                    |+.++.++.    +.+++.+.++||++||...+.....   
T Consensus        80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  156 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG---  156 (256)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC---
Confidence            432     47999999993                    233334444    4555566779999999765432211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                          ...+..+|.+.+.+.+.       .++++..|+||.+.++...... ...+...+....+         ...++++
T Consensus       157 ----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  223 (256)
T PRK06124        157 ----DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTP---------LGRWGRP  223 (256)
T ss_pred             ----ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCC---------CCCCCCH
Confidence                01122244443333222       3799999999999987532110 0111122222211         1236789


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|++++++.++.++.. .+|+.+.+.++.
T Consensus       224 ~~~a~~~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        224 EEIAGAAVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence            9999999999987654 457888887664

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.46  E-value=1.9e-12  Score=119.31  Aligned_cols=199  Identities=17%  Similarity=0.178  Sum_probs=117.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ++++||||    ||+|+||+.+++.|+++|++|+++.+ +.+....+.       .++.  ..++.++.+|   .+++.+
T Consensus         1 m~k~ilIt----Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~   69 (248)
T PRK06947          1 MRKVVLIT----GASRGIGRATAVLAAARGWSVGINYARDAAAAEETA-------DAVRAAGGRACVVAGDVANEADVIA   69 (248)
T ss_pred             CCcEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHhcCCcEEEEEeccCCHHHHHH
Confidence            36789999    99999999999999999999987654 333222110       1111  1245666676   455555


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH-HhCC------CCEEEEeccccc-cc
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA-KSSG------VKQFLFISSAGI-YK  192 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa-~~~g------v~~~v~~SS~~v-y~  192 (401)
                      +++..     ++|+|||++|.                     |+.+...+++++ +...      -.+||++||... ++
T Consensus        70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~  149 (248)
T PRK06947         70 MFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG  149 (248)
T ss_pred             HHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC
Confidence            44321     48999999983                     334444554332 2221      136999998654 33


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                      ....       ...+..+|.+.+.+...       .+++++++|||.+..+.....-............+.   +     
T Consensus       150 ~~~~-------~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---~-----  214 (248)
T PRK06947        150 SPNE-------YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPL---G-----  214 (248)
T ss_pred             CCCC-------CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCC---C-----
Confidence            2211       11233466665543322       379999999999988742211001111111111111   1     


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                       -+..++|+++.++.++.++.. ..|+++.+.++
T Consensus       215 -~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        215 -RAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             -CCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence             124789999999999887653 45788887765

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.7e-12  Score=120.61  Aligned_cols=204  Identities=14%  Similarity=0.151  Sum_probs=123.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+.......    ++... ....+.++.+|   .+++..++
T Consensus         6 ~~k~vlVt----Gas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (260)
T PRK07063          6 AGKVALVT----GAAQGIGAAIARAFAREGAAVALADLDAALAERAAA----AIARDVAGARVLAVPADVTDAASVAAAV   77 (260)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhccCCceEEEEEccCCCHHHHHHHH
Confidence            46899999    999999999999999999999999997754432211    00000 11245566666   55566555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||++|.                    |+.++..+++++    ++.+..++|++||...+.....   
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  154 (260)
T PRK07063         78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG---  154 (260)
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC---
Confidence            431     47999999983                    344444444443    4445568999999765432211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                          ...+..+|.+.+.+.+.       .|+++..|+||.+-.+.....     .............+..         -
T Consensus       155 ----~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------r  221 (260)
T PRK07063        155 ----CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMK---------R  221 (260)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCC---------C
Confidence                01122344444433322       278999999999866532110     0000111111111211         2


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +..++|+|.+++.++.+... ..|+++.+.+|..
T Consensus       222 ~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        222 IGRPEEVAMTAVFLASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             CCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence            34789999999999887543 5678998887753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.7e-12  Score=118.16  Aligned_cols=196  Identities=19%  Similarity=0.212  Sum_probs=122.4

Q ss_pred             EEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhhcCC-c
Q 015746           78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVGGV-T  152 (401)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~~~~-~  152 (401)
                      |||    ||+|+||+.++++|+++|++|++++|+.++.....       .++. ..+++++.+|   .+++.++++.. +
T Consensus         1 lIt----Gas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   69 (230)
T PRK07041          1 LVV----GGSSGIGLALARAFAAEGARVTIASRSRDRLAAAA-------RALGGGAPVRTAALDITDEAAVDAFFAEAGP   69 (230)
T ss_pred             Cee----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHhcCCceEEEEccCCCHHHHHHHHHhcCC
Confidence            689    99999999999999999999999999864432211       0110 1356667776   67777777654 3


Q ss_pred             ccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          153 FDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       153 ~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      +|++||+++.                    |+.+..+++++....+.++||++||.+.|......       ..+..+|.
T Consensus        70 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~-------~~Y~~sK~  142 (230)
T PRK07041         70 FDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASG-------VLQGAINA  142 (230)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcc-------hHHHHHHH
Confidence            7999999984                    34455666665555556799999998877542110       00112344


Q ss_pred             HHHHHHHHh-----CCCeEEEecCeeecCCCCC---CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcC
Q 015746          213 QVEKYISEN-----FSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (401)
Q Consensus       213 ~~ek~~~e~-----g~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~  284 (401)
                      +.+.+.+..     +++++.++|+.+..+....   .....++.......+.         ..+..++|+|++++.++++
T Consensus       143 a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~  213 (230)
T PRK07041        143 ALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAAN  213 (230)
T ss_pred             HHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcC
Confidence            444433332     5678888888876542110   0011122222222221         1123689999999999986


Q ss_pred             CCcCCCcEEEecCCCCC
Q 015746          285 PEAASSNIFNLVSDRAV  301 (401)
Q Consensus       285 ~~~~~g~~~~~~~~~~~  301 (401)
                      . ...|++|++.++.++
T Consensus       214 ~-~~~G~~~~v~gg~~~  229 (230)
T PRK07041        214 G-FTTGSTVLVDGGHAI  229 (230)
T ss_pred             C-CcCCcEEEeCCCeec
Confidence            4 344689999987653

>PRK08264 short chain dehydrogenase; Validated

Probab=99.45  E-value=4.5e-12  Score=116.06  Aligned_cols=167  Identities=16%  Similarity=0.103  Sum_probs=111.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+++||||    ||+|+||++++++|+++|+ +|++++|+.++...            ...++.++.+|   .+++.+++
T Consensus         5 ~~~~vlIt----Ggsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~   68 (238)
T PRK08264          5 KGKVVLVT----GANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------LGPRVVPLQLDVTDPASVAAAA   68 (238)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------cCCceEEEEecCCCHHHHHHHH
Confidence            34789999    9999999999999999999 99999998754432            11255666666   67777777


Q ss_pred             cCC-cccEEEeCCCC---------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK---------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~---------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      +.. .+|+|||+++.                     |+.+..++++++.    +.+.++||++||...+.+....     
T Consensus        69 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~-----  143 (238)
T PRK08264         69 EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNL-----  143 (238)
T ss_pred             HhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCc-----
Confidence            654 37999999985                     3455666666643    4566789999998776532110     


Q ss_pred             CCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                        ..+..+|.+.+.+...       .+++++++||+.+.++....             .    .+      ..+..+|++
T Consensus       144 --~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-------------~----~~------~~~~~~~~a  198 (238)
T PRK08264        144 --GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-------------L----DA------PKASPADVA  198 (238)
T ss_pred             --hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-------------C----Cc------CCCCHHHHH
Confidence              0111234444332222       27899999999987653110             0    00      135678888


Q ss_pred             HHHHHHhcCC
Q 015746          276 SMLTLAVENP  285 (401)
Q Consensus       276 ~~~~~~~~~~  285 (401)
                      +.++..+...
T Consensus       199 ~~~~~~~~~~  208 (238)
T PRK08264        199 RQILDALEAG  208 (238)
T ss_pred             HHHHHHHhCC
Confidence            8888777754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.45  E-value=3.7e-12  Score=117.17  Aligned_cols=199  Identities=16%  Similarity=0.174  Sum_probs=119.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      +++.+|||    ||+|+||++++++|+++|++|++..+.. .....       ...++..  ..+..+.+|   .+++.+
T Consensus         2 ~~k~~lVt----G~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~~~~   70 (246)
T PRK12938          2 SQRIAYVT----GGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVK-------WLEDQKALGFDFIASEGNVGDWDSTKA   70 (246)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHH-------HHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            35789999    9999999999999999999988865432 21111       0111111  134445566   555555


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+++.                    |+.+    ++.+++.+++.+.++||++||......... 
T Consensus        71 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  149 (246)
T PRK12938         71 AFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG-  149 (246)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC-
Confidence            54421     47999999984                    2233    444566666677779999999654322110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                            ...+..+|.+.+.+.+.       .++++++++||.+.++.... ..+.++..+....+.         ..+..
T Consensus       150 ------~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~  213 (246)
T PRK12938        150 ------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGS  213 (246)
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCCc---------cCCcC
Confidence                  00111233333322221       37899999999998874321 112233333332222         12346


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ++|++.++..++.++.. ..|+++.+.++.
T Consensus       214 ~~~v~~~~~~l~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        214 PDEIGSIVAWLASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             HHHHHHHHHHHcCcccCCccCcEEEECCcc
Confidence            89999999988876543 457888887653

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1e-12  Score=123.01  Aligned_cols=176  Identities=19%  Similarity=0.169  Sum_probs=113.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|.||++++++|+++|++|++++|+.++...+..       ++.  .+.++.+|   ++++.++++
T Consensus         4 ~~~~ilVt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~--~~~~~~~D~~~~~~~~~~~~   70 (273)
T PRK07825          4 RGKVVAIT----GGARGIGLATARALAALGARVAIGDLDEALAKETAA-------ELG--LVVGGPLDVTDPASFAAFLD   70 (273)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------Hhc--cceEEEccCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998755432111       111  35566666   555555443


Q ss_pred             CC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     .+|++||++|.                    |+.+    ++.++..+++.+.++||++||...+.....    
T Consensus        71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  146 (273)
T PRK07825         71 AVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG----  146 (273)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC----
Confidence            32     47999999984                    2333    344555666777789999999776533211    


Q ss_pred             CCCCCCCCCChHHHHHH-------HHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~-------~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                         ...+..+|.+.+.+       +...|+++++|+|+.+..+...             +.+      +.....+++++|
T Consensus       147 ---~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------~~~------~~~~~~~~~~~~  204 (273)
T PRK07825        147 ---MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------GTG------GAKGFKNVEPED  204 (273)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------ccc------cccCCCCCCHHH
Confidence               01112244433322       2224899999999987544211             000      001134679999


Q ss_pred             HHHHHHHHhcCCCc
Q 015746          274 LSSMLTLAVENPEA  287 (401)
Q Consensus       274 ~a~~~~~~~~~~~~  287 (401)
                      +|+.++.++.++..
T Consensus       205 va~~~~~~l~~~~~  218 (273)
T PRK07825        205 VAAAIVGTVAKPRP  218 (273)
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999987654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.45  E-value=8.1e-12  Score=114.27  Aligned_cols=193  Identities=15%  Similarity=0.212  Sum_probs=117.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +|++|||    ||+|.||++++++|+++|++|++++|+.+...          ..+...++.++.+|   .+++.++++.
T Consensus         2 ~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~~   67 (236)
T PRK06483          2 PAPILIT----GAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI----------DGLRQAGAQCIQADFSTNAGIMAFIDE   67 (236)
T ss_pred             CceEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCchhHH----------HHHHHcCCEEEEcCCCCHHHHHHHHHH
Confidence            5789999    99999999999999999999999999764321          12222345666676   4555554433


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCC--CCEEEEecccccccCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSG--VKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~g--v~~~v~~SS~~vy~~~~~~~~  199 (401)
                      .     ++|++||++|.                    |+.+.    +.++...++.+  ..++|++||.........   
T Consensus        68 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~---  144 (236)
T PRK06483         68 LKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK---  144 (236)
T ss_pred             HHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC---
Confidence            2     37999999984                    22222    33444444444  458999998654321110   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH----h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e----~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ...+..+|.+.+.+.+.    +  ++++..|+||.+.......   ..+........++..         +...+|
T Consensus       145 ----~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~  208 (236)
T PRK06483        145 ----HIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLKI---------EPGEEE  208 (236)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCcccc---------CCCHHH
Confidence                11122344444443332    2  5789999999875432111   111222222222222         236899


Q ss_pred             HHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          274 LSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       274 ~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                      +++++..++. ....+|+++.+.++..
T Consensus       209 va~~~~~l~~-~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        209 IIDLVDYLLT-SCYVTGRSLPVDGGRH  234 (236)
T ss_pred             HHHHHHHHhc-CCCcCCcEEEeCcccc
Confidence            9999999987 3345579998887753

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.45  E-value=4.2e-12  Score=118.11  Aligned_cols=200  Identities=16%  Similarity=0.191  Sum_probs=122.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .++++|||    ||+|+||++++++|+++|++|++++|+......        ...+.  ...+.++.+|   .+++.++
T Consensus         5 ~~~~~lIt----G~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~--------~~~~~~~~~~~~~~~~Dl~~~~~v~~~   72 (263)
T PRK08226          5 TGKTALIT----GALQGIGEGIARVFARHGANLILLDISPEIEKL--------ADELCGRGHRCTAVVADVRDPASVAAA   72 (263)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEecCCHHHHHH--------HHHHHHhCCceEEEECCCCCHHHHHHH
Confidence            45899999    999999999999999999999999987632110        01111  1245566676   5556655


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +...     ++|+|||++|.                    |+.+..++++++.    +.+..+||++||........  +
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--~  150 (263)
T PRK08226         73 IKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD--P  150 (263)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC--C
Confidence            5432     47999999993                    4555666666544    34556899999865321100  0


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-------CcHHHHHHHHHcCCCcccCCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-------DCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                          ....+..+|.+.+.+.+.       .+++++.|+||.+.++....       .....++..+..+.|..       
T Consensus       151 ----~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------  219 (263)
T PRK08226        151 ----GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLR-------  219 (263)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCC-------
Confidence                001122244443333322       27899999999998863111       11122333343333321       


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                        .+..++|+|+++..++.... ..+|+++.+.++.
T Consensus       220 --~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        220 --RLADPLEVGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             --CCCCHHHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence              23478999999988886543 3557888888764

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.8e-12  Score=117.31  Aligned_cols=189  Identities=20%  Similarity=0.199  Sum_probs=117.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++||||    ||+|+||++++++|+++|++|++++|++++...+.       .++.. .+++++.+|   .+++..+++
T Consensus         6 ~~~ilIt----Gatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~D~~~~~~~~~~~~   74 (237)
T PRK07326          6 GKVALIT----GGSKGIGFAIAEALLAEGYKVAITARDQKELEEAA-------AELNNKGNVLGLAADVRDEADVQRAVD   74 (237)
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHH-------HHHhccCcEEEEEccCCCHHHHHHHHH
Confidence            4789999    99999999999999999999999999875433211       11110 356667776   555555554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh---CCCCEEEEecccccccCCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~---~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      ..     ++|+|||+++.                    |+.+..++++++.+   .+.+++|++||...+......    
T Consensus        75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~----  150 (237)
T PRK07326         75 AIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGG----  150 (237)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCC----
Confidence            21     47999999883                    33444555555543   244689999997654322110    


Q ss_pred             CCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          202 GDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                         ..+..+|.+.+.+.+       ..|++++++||+.+.++.....             +..    ..  ...+..+|+
T Consensus       151 ---~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------------~~~----~~--~~~~~~~d~  208 (237)
T PRK07326        151 ---AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-------------PSE----KD--AWKIQPEDI  208 (237)
T ss_pred             ---chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-------------cch----hh--hccCCHHHH
Confidence               001113332222222       2489999999999876532110             000    00  012678999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          275 SSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      ++.++.++..+...-...+.+..++
T Consensus       209 a~~~~~~l~~~~~~~~~~~~~~~~~  233 (237)
T PRK07326        209 AQLVLDLLKMPPRTLPSKIEVRPSR  233 (237)
T ss_pred             HHHHHHHHhCCccccccceEEecCC
Confidence            9999999988876433455555444

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.4e-12  Score=119.25  Aligned_cols=197  Identities=18%  Similarity=0.203  Sum_probs=119.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.........       ++   +..++.+|   .+++.+++
T Consensus         5 ~~~~~vlIt----GasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-------~~---~~~~~~~D~~~~~~~~~~~   70 (255)
T PRK06057          5 LAGRVAVIT----GGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD-------EV---GGLFVPTDVTDEDAVNALF   70 (255)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-------Hc---CCcEEEeeCCCHHHHHHHH
Confidence            456899999    999999999999999999999999997654322110       11   11344444   66666666


Q ss_pred             cCC-----cccEEEeCCCC----------------------ChhhHH----HHHHHHHhCCCCEEEEeccc-ccccCCCC
Q 015746          149 GGV-----TFDVVLDNNGK----------------------NLDAVR----PVADWAKSSGVKQFLFISSA-GIYKPADE  196 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~----------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~-~vy~~~~~  196 (401)
                      +..     ++|+|||++|.                      |+.++.    .++..+++.+..++|++||. ++++....
T Consensus        71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~  150 (255)
T PRK06057         71 DTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS  150 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC
Confidence            532     47999999983                      222222    33444445555689999885 45553211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc---HHHHHHHHHcCCCcccCCCCccee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                             ...+..+|.+.+.+.+.       .|+++++++||.+.++.....+   .... .+...  ..+       ..
T Consensus       151 -------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~--~~~-------~~  213 (255)
T PRK06057        151 -------QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERA-ARRLV--HVP-------MG  213 (255)
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHH-HHHHh--cCC-------CC
Confidence                   01122345443333332       3899999999999887432110   0110 01110  011       12


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+.+++|+++++..++.+... ..|+.+.+.++.
T Consensus       214 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        214 RFAEPEEIAAAVAFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCcEEEECCCe
Confidence            467899999999888876543 446888887653

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.44  E-value=4.5e-12  Score=118.18  Aligned_cols=200  Identities=18%  Similarity=0.167  Sum_probs=124.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..++++|||    ||+|.||++++++|+++|++|+++.|+.++.....       ..+.  ..++.++.+|   .+++.+
T Consensus         8 ~~~k~~lIt----Ga~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~   76 (265)
T PRK07097          8 LKGKIALIT----GASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-------AAYRELGIEAHGYVCDVTDEDGVQA   76 (265)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEcCCCCHHHHHH
Confidence            456889999    99999999999999999999999988775433211       1111  1245666777   555555


Q ss_pred             hhcC-----CcccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCCCEEEEecccc-cccCCCC
Q 015746          147 VVGG-----VTFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAG-IYKPADE  196 (401)
Q Consensus       147 ~~~~-----~~~d~Vv~~a~~--------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~-vy~~~~~  196 (401)
                      ++..     .++|+|||++|.                    |+.+..    .++..+++.+..+||++||.. .++... 
T Consensus        77 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  155 (265)
T PRK07097         77 MVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET-  155 (265)
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC-
Confidence            5543     247999999994                    333333    344455555667899999864 333211 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-------cHHHHHHHHHcCCCcccCCCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  262 (401)
                             ...+..+|.+.+.+.+.       .|+.++.|+||.+.++.....       -...+...+....+.      
T Consensus       156 -------~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  222 (265)
T PRK07097        156 -------VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPA------  222 (265)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCc------
Confidence                   11122345544443333       389999999999988742210       000111112221111      


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                         ..+...+|+|..++.++.... ..+|+++.+.++.
T Consensus       223 ---~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        223 ---ARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             ---cCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence               124468999999999998753 3457888888764

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.2e-12  Score=118.37  Aligned_cols=183  Identities=11%  Similarity=0.094  Sum_probs=115.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +|+++|||    ||+|+||+.++++|+++|++|++++|+.++...+..    ...+ ...++.++.+|   .+++.++++
T Consensus         5 ~~k~vlIt----G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~   75 (241)
T PRK07454          5 SMPRALIT----GASSGIGKATALAFAKAGWDLALVARSQDALEALAA----ELRS-TGVKAAAYSIDLSNPEAIAPGIA   75 (241)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-CCCcEEEEEccCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998754322110    0000 01256677777   555555554


Q ss_pred             C-----CcccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 G-----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~--------------------~~~~~~~----ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      .     .++|+|||++|.                    |+.+..+    +++.+++.+.++||++||...+++....   
T Consensus        76 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---  152 (241)
T PRK07454         76 ELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQW---  152 (241)
T ss_pred             HHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCc---
Confidence            3     147999999984                    2333333    4444555666789999998877543210   


Q ss_pred             CCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ..+..+|++.+.+.+       ..++++++||||.+-.+.....            .......    ...++.++|
T Consensus       153 ----~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~~~~~~~----~~~~~~~~~  212 (241)
T PRK07454        153 ----GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------TVQADFD----RSAMLSPEQ  212 (241)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------ccccccc----cccCCCHHH
Confidence                011123444333222       2389999999999877632110            0000000    012468999


Q ss_pred             HHHHHHHHhcCCCc
Q 015746          274 LSSMLTLAVENPEA  287 (401)
Q Consensus       274 ~a~~~~~~~~~~~~  287 (401)
                      +|++++.++..+..
T Consensus       213 va~~~~~l~~~~~~  226 (241)
T PRK07454        213 VAQTILHLAQLPPS  226 (241)
T ss_pred             HHHHHHHHHcCCcc
Confidence            99999999988754

>PRK12743 oxidoreductase; Provisional

Probab=99.44  E-value=4.4e-12  Score=117.57  Aligned_cols=198  Identities=14%  Similarity=0.109  Sum_probs=120.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      +++||||    ||+|+||++++++|+++|++|+++.+... ....+.       .++.  ...+.++.+|   ++++..+
T Consensus         2 ~k~vlIt----Gas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~   70 (256)
T PRK12743          2 AQVAIVT----ASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA-------EEVRSHGVRAEIRQLDLSDLPEGAQA   70 (256)
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHHH
Confidence            5789999    99999999999999999999988876442 221110       1111  1245666676   5555554


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CCEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~g-v~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|+|||++|.                    |+.+...+++++..    .+ -++||++||......... 
T Consensus        71 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~-  149 (256)
T PRK12743         71 LDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPG-  149 (256)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCC-
Confidence            4431     47999999983                    44555666665543    22 248999999653221110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                            ...+..+|.+.+.+++.       .+++++.|+||.++++...... .........+.+..         .+.+
T Consensus       150 ------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~---------~~~~  213 (256)
T PRK12743        150 ------ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD-SDVKPDSRPGIPLG---------RPGD  213 (256)
T ss_pred             ------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC-hHHHHHHHhcCCCC---------CCCC
Confidence                  01122244444443322       3789999999999987432110 11111111121211         1347


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+|++.++..++..... .+|+++.+.++.
T Consensus       214 ~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        214 THEIASLVAWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            89999999988876543 457899888775

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.43  E-value=6.2e-12  Score=118.04  Aligned_cols=202  Identities=16%  Similarity=0.198  Sum_probs=124.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++++||    ||+|+||++++++|+++|++|++++|+.+....+..    .+... ..++.++.+|   .+++..+++
T Consensus         9 ~~k~vlVt----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~Dl~~~~~v~~~~~   79 (278)
T PRK08277          9 KGKVAVIT----GGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVA----EIKAA-GGEALAVKADVLDKESLEQARQ   79 (278)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCeEEEEECCCCCHHHHHHHHH
Confidence            45889999    999999999999999999999999997654332111    00000 1235566676   455555544


Q ss_pred             C-----CcccEEEeCCCC-----------------------------------ChhhH----HHHHHHHHhCCCCEEEEe
Q 015746          150 G-----VTFDVVLDNNGK-----------------------------------NLDAV----RPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~-----------------------------------~~~~~----~~ll~aa~~~gv~~~v~~  185 (401)
                      .     -++|+|||+++.                                   |+.+.    +.++..+++.+..+||++
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~i  159 (278)
T PRK08277         80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINI  159 (278)
T ss_pred             HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            2     147999999983                                   12222    244455555655689999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC------cHHHHHHHHHc
Q 015746          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVR  252 (401)
Q Consensus       186 SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~  252 (401)
                      ||...+......       ..+..+|.+.+.+.+.       .++++..|+||.+.++.....      ........+..
T Consensus       160 sS~~~~~~~~~~-------~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
T PRK08277        160 SSMNAFTPLTKV-------PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILA  232 (278)
T ss_pred             ccchhcCCCCCC-------chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhc
Confidence            998877533111       1122355554444332       278999999999988742110      00011112222


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcC-CC-cCCCcEEEecCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-PE-AASSNIFNLVSDR  299 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~-~~-~~~g~~~~~~~~~  299 (401)
                      ..+.         .-+...+|+|++++.++.. .. ..+|+++.+.+|.
T Consensus       233 ~~p~---------~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        233 HTPM---------GRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             cCCc---------cCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence            2221         2245789999999998887 43 3567899888763

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.7e-12  Score=120.39  Aligned_cols=208  Identities=15%  Similarity=0.143  Sum_probs=121.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+|+||.+++++|+++|++|+++.+...........   ..+++.  ...+.++.+|   .+++.++
T Consensus         7 ~~k~vlIt----Ga~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~D~~~~~~~~~~   79 (257)
T PRK12744          7 KGKVVLIA----GGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE---TVAAVKAAGAKAVAFQADLTTAAAVEKL   79 (257)
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH---HHHHHHHhCCcEEEEecCcCCHHHHHHH
Confidence            45899999    9999999999999999999988877654321110000   001111  1245666676   5666655


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEe-ccc-ccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFI-SSA-GIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~-SS~-~vy~~~~~~~  198 (401)
                      +...     ++|++||++|.                    |+.++..+++++...  ...+++++ ||. +.+.+.    
T Consensus        80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~----  155 (257)
T PRK12744         80 FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPF----  155 (257)
T ss_pred             HHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCC----
Confidence            5432     47999999994                    455666666766542  11356665 332 333211    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                           ...+..+|.+.+.+.+..       +++++.++||.+.++............   .... ...........+.++
T Consensus       156 -----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~  226 (257)
T PRK12744        156 -----YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVA---YHKT-AAALSPFSKTGLTDI  226 (257)
T ss_pred             -----cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhh---cccc-cccccccccCCCCCH
Confidence                 112334677766655443       689999999999776321110000000   0000 000111111246789


Q ss_pred             HHHHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          272 RDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                      +|++.++..++++....+|+++++.++..
T Consensus       227 ~dva~~~~~l~~~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        227 EDIVPFIRFLVTDGWWITGQTILINGGYT  255 (257)
T ss_pred             HHHHHHHHHhhcccceeecceEeecCCcc
Confidence            99999999999864334579999988743

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.43  E-value=4.1e-12  Score=117.50  Aligned_cols=202  Identities=16%  Similarity=0.128  Sum_probs=123.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++......    .+... ...+.++.+|   .+++..+++
T Consensus         6 ~~k~ilIt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~i~~~~~   76 (253)
T PRK06172          6 SGKVALVT----GGAAGIGRATALAFAREGAKVVVADRDAAGGEETVA----LIREA-GGEALFVACDVTRDAEVKALVE   76 (253)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HHHhc-CCceEEEEcCCCCHHHHHHHHH
Confidence            35899999    999999999999999999999999998754332111    01111 1246667777   555555554


Q ss_pred             CC-----cccEEEeCCCC---------------------ChhhHH----HHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK---------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~---------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|+|||++|.                     |+.+..    .++..+++.+..++|++||...+.....   
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---  153 (253)
T PRK06172         77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK---  153 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC---
Confidence            32     47999999984                     222332    3334444455568999999887654321   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                          ...+..+|.+.+.+.+.       .++++..++||.+-.+.....  ........+....+.         ..+..
T Consensus       154 ----~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  220 (253)
T PRK06172        154 ----MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV---------GRIGK  220 (253)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC---------CCccC
Confidence                11122344444333322       278899999998866532110  001111112121111         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ++|+++.++.++.+... .+|+.+++.++.
T Consensus       221 p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        221 VEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            89999999999887543 567999988874

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.43  E-value=8e-12  Score=116.81  Aligned_cols=178  Identities=15%  Similarity=0.128  Sum_probs=113.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~~~  149 (401)
                      |+||||    ||+|+||++++++|+++|++|++++|+.++.+...       .++.  ...+.++.+|   .+++.+++.
T Consensus         1 ~~vlVt----GasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~~~~   69 (270)
T PRK05650          1 NRVMIT----GAASGLGRAIALRWAREGWRLALADVNEEGGEETL-------KLLREAGGDGFYQRCDVRDYSQLTALAQ   69 (270)
T ss_pred             CEEEEe----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            579999    99999999999999999999999999875433211       1111  1245566666   555555554


Q ss_pred             C-----CcccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 G-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      .     .++|+|||++|.                    |+.    .++.++..+++.+..+||++||...+.+..     
T Consensus        70 ~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----  144 (270)
T PRK05650         70 ACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP-----  144 (270)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC-----
Confidence            2     247999999984                    222    334455566777777999999987654321     


Q ss_pred             CCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCCccee
Q 015746          201 EGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                             ..+.|...|..         .+   .|+.+++++||.+.++.....  ...... .... .   .     ...
T Consensus       145 -------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~-~---~-----~~~  207 (270)
T PRK05650        145 -------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMK-AQVG-K---L-----LEK  207 (270)
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHH-HHHH-H---H-----hhc
Confidence                   12445544432         22   378999999999987643210  000000 0000 0   0     012


Q ss_pred             eeeeHHHHHHHHHHHhcCC
Q 015746          267 NIAHVRDLSSMLTLAVENP  285 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~  285 (401)
                      .+++++|+|+.++.++++.
T Consensus       208 ~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        208 SPITAADIADYIYQQVAKG  226 (270)
T ss_pred             CCCCHHHHHHHHHHHHhCC
Confidence            3468999999999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.43  E-value=4.9e-12  Score=116.64  Aligned_cols=199  Identities=15%  Similarity=0.191  Sum_probs=123.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ..+++|||    ||+|+||+.+++.|+++|++|++++|+.++......    .+... ...+.++.+|   .+++.++++
T Consensus         4 ~~~~~lIt----G~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~   74 (253)
T PRK08217          4 KDKVIVIT----GGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVA----ECGAL-GTEVRGYAANVTDEEDVEATFA   74 (253)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCceEEEEcCCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999988754322110    00000 1245556666   455555444


Q ss_pred             CC-----cccEEEeCCCC-----------------------------ChhhHH----HHHHHHHhC-CCCEEEEeccccc
Q 015746          150 GV-----TFDVVLDNNGK-----------------------------NLDAVR----PVADWAKSS-GVKQFLFISSAGI  190 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~-----------------------------~~~~~~----~ll~aa~~~-gv~~~v~~SS~~v  190 (401)
                      ..     ++|+|||++|.                             |+.+..    .++..+.+. .-.++|++||...
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~  154 (253)
T PRK08217         75 QIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR  154 (253)
T ss_pred             HHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence            32     47999999983                             112222    223333333 2247999999887


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                      |+.....        .+..+|.+.+.+++.       .+++++.++|+.+.++.... ..+.+........+.       
T Consensus       155 ~~~~~~~--------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~-------  218 (253)
T PRK08217        155 AGNMGQT--------NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV-------  218 (253)
T ss_pred             cCCCCCc--------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc-------
Confidence            7543211        122355554443322       37999999999998875422 122233333333322       


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                        ..+.+++|+++++..++... ..+|++|++.++.
T Consensus       219 --~~~~~~~~~a~~~~~l~~~~-~~~g~~~~~~gg~  251 (253)
T PRK08217        219 --GRLGEPEEIAHTVRFIIEND-YVTGRVLEIDGGL  251 (253)
T ss_pred             --CCCcCHHHHHHHHHHHHcCC-CcCCcEEEeCCCc
Confidence              23458899999999998653 3457999999864

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.42  E-value=3.6e-12  Score=106.72  Aligned_cols=146  Identities=19%  Similarity=0.154  Sum_probs=112.1

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~  148 (401)
                      .+.+|.++|+    ||||-+|+.+++++++++.  +|+++.|...-.            ...+..+..+..|.+.|++..
T Consensus        15 ~mq~~s~fvl----GAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d------------~at~k~v~q~~vDf~Kl~~~a   78 (238)
T KOG4039|consen   15 RMQNMSGFVL----GATGLCGGGLLKHAQEAPQFSKVYAILRRELPD------------PATDKVVAQVEVDFSKLSQLA   78 (238)
T ss_pred             hhhccceEEE----eccccccHHHHHHHHhcccceeEEEEEeccCCC------------ccccceeeeEEechHHHHHHH
Confidence            3567899999    9999999999999999984  799999876221            122235566667877777776


Q ss_pred             cCCc-ccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHH
Q 015746          149 GGVT-FDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (401)
Q Consensus       149 ~~~~-~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~  214 (401)
                      .+.+ +|+.+.+-|.             +-+....+.++|++.|+++|+++||.++.....         ..+...|-.+
T Consensus        79 ~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSr---------FlY~k~KGEv  149 (238)
T KOG4039|consen   79 TNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSR---------FLYMKMKGEV  149 (238)
T ss_pred             hhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccc---------eeeeeccchh
Confidence            6553 7999987663             567788899999999999999999988754332         2233467788


Q ss_pred             HHHHHHhCC-CeEEEecCeeecCCCCCC
Q 015746          215 EKYISENFS-NWASFRPQYMIGSGNNKD  241 (401)
Q Consensus       215 ek~~~e~g~-~~~ilRp~~v~G~~~~~~  241 (401)
                      |+-+.|..+ .++|+|||.+.|.+....
T Consensus       150 E~~v~eL~F~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  150 ERDVIELDFKHIIILRPGPLLGERTESR  177 (238)
T ss_pred             hhhhhhccccEEEEecCcceeccccccc
Confidence            998888866 488999999999876553

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.42  E-value=3.8e-12  Score=119.21  Aligned_cols=141  Identities=22%  Similarity=0.143  Sum_probs=91.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.++...           +...+++++.+|   .+++.++++.
T Consensus         1 mk~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~   65 (274)
T PRK05693          1 MPVVLIT----GCSSGIGRALADAFKAAGYEVWATARKAEDVEA-----------LAAAGFTAVQLDVNDGAALARLAEE   65 (274)
T ss_pred             CCEEEEe----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-----------HHHCCCeEEEeeCCCHHHHHHHHHH
Confidence            4789999    999999999999999999999999998754322           112245556666   5666655543


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh---CCCCEEEEecccccccCCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~---~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      .     ++|+|||++|.                    |+.++.++++++..   .+..++|++||...+....   ..  
T Consensus        66 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~--  140 (274)
T PRK05693         66 LEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP---FA--  140 (274)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC---Cc--
Confidence            2     48999999983                    34455555555422   2335799999865432211   00  


Q ss_pred             CCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecC
Q 015746          203 DVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGS  236 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~  236 (401)
                        ..+..+|.+.+.+..    |   .|+++++++||.+..+
T Consensus       141 --~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        141 --GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             --cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence              011123433333222    2   4899999999999765

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.42  E-value=5.1e-12  Score=116.81  Aligned_cols=201  Identities=16%  Similarity=0.188  Sum_probs=117.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ++|++|||    ||+|+||++++++|+++|++|++.. |+.++.....       .++.  ...+..+..|   .+++..
T Consensus         3 ~~k~~lIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   71 (252)
T PRK12747          3 KGKVALVT----GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV-------YEIQSNGGSAFSIGANLESLHGVEA   71 (252)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHHHhcCCceEEEecccCCHHHHHH
Confidence            35899999    9999999999999999999998875 3333222110       1111  1123344444   333332


Q ss_pred             hhc----------C-CcccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccC
Q 015746          147 VVG----------G-VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (401)
Q Consensus       147 ~~~----------~-~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~  193 (401)
                      +++          + .++|+|||+||.                    |+.++..+++++...  ...+||++||...+..
T Consensus        72 ~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~  151 (252)
T PRK12747         72 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  151 (252)
T ss_pred             HHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC
Confidence            221          1 158999999993                    455555666555432  1248999999876543


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                      ....       ..+..+|.+++.+.+.       .|++++.|.||.+.++..................        ....
T Consensus       152 ~~~~-------~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~  216 (252)
T PRK12747        152 LPDF-------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--------SAFN  216 (252)
T ss_pred             CCCc-------hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhc--------Cccc
Confidence            2110       1122344444433322       2899999999999887421100000111111110        0112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+.+++|+|+++..++..... ..|+++.+.++.
T Consensus       217 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        217 RLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             CCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            356899999999998875443 457889888764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.42  E-value=5e-12  Score=118.41  Aligned_cols=202  Identities=13%  Similarity=0.124  Sum_probs=119.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .++++|||    ||+|+||++++++|+++|++|++++|+ +....+.       .++.  ..++.++.+|   .+++..+
T Consensus         5 ~~k~vlIt----Gas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~   72 (272)
T PRK08589          5 ENKVAVIT----GASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-------DKIKSNGGKAKAYHVDISDEQQVKDF   72 (272)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-------HHHHhcCCeEEEEEeecCCHHHHHHH
Confidence            46899999    999999999999999999999999998 4332211       1111  1235566666   5555554


Q ss_pred             hcCC-----cccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|++||++|.                     |+.+    ++.++..+++.+ .++|++||...+..... 
T Consensus        73 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-  150 (272)
T PRK08589         73 ASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLY-  150 (272)
T ss_pred             HHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCC-
Confidence            4432     37999999984                     1222    234455555555 58999999776543211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC---cHHHHHHHHHcCCCcccCCCCcceee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                            ...+..+|.+.+.+.+.       .|++++.|.||.+..+.....   ....+............     ....
T Consensus       151 ------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  219 (272)
T PRK08589        151 ------RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-----PLGR  219 (272)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC-----CCCC
Confidence                  01122244443333332       279999999999876632110   00000000000000000     0112


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..++|+|+++..++.+... .+|+++.+.++.
T Consensus       220 ~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        220 LGKPEEVAKLVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence            45789999999998876543 457888888764

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.42  E-value=7e-12  Score=115.94  Aligned_cols=201  Identities=16%  Similarity=0.221  Sum_probs=123.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +|++|||    ||+|+||++++++|+++|++|++++|+.+....+..    .+... ...+.++.+|   ++++.++++.
T Consensus         1 ~k~~lIt----G~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   71 (252)
T PRK07677          1 EKVVIIT----GGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKL----EIEQF-PGQVLTVQMDVRNPEDVQKMVEQ   71 (252)
T ss_pred             CCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCcEEEEEecCCCHHHHHHHHHH
Confidence            3789999    999999999999999999999999998754332110    00000 1245666666   5566655543


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      .     ++|+|||++|.                    |+.+..++++++.    +.+ ..+||++||...+.....    
T Consensus        72 ~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----  147 (252)
T PRK07677         72 IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG----  147 (252)
T ss_pred             HHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC----
Confidence            2     47999999972                    3455666666663    222 358999998754432111    


Q ss_pred             CCCCCCCCCChHHHHHHHH----H----hCCCeEEEecCeeecCCCCCCc--HHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          201 EGDVVKPDAGHVQVEKYIS----E----NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~----e----~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                         ...+..+|.+.+.+.+    +    +|+++..|+||.+.+.......  .....+.+.+..++.         .+..
T Consensus       148 ---~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  215 (252)
T PRK07677        148 ---VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLG---------RLGT  215 (252)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCC---------CCCC
Confidence               1112235554443332    2    3789999999999854211110  122233333332221         2447


Q ss_pred             HHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      .+|+++++..++.... ..+|+++.+.++.
T Consensus       216 ~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        216 PEEIAGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence            8999999988887653 3567888888764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.42  E-value=2.6e-12  Score=119.30  Aligned_cols=181  Identities=19%  Similarity=0.146  Sum_probs=111.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      |++||||    ||+|+||+.++++|+++|++|++++|+.+....+..       .+....+.++.+|   .+++.+++.+
T Consensus         1 mk~vlIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~v~~~~~~   69 (260)
T PRK08267          1 MKSIFIT----GAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-------ELGAGNAWTGALDVTDRAAWDAALAD   69 (260)
T ss_pred             CcEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------HhcCCceEEEEecCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998764432211       1112346666776   5555555442


Q ss_pred             ------CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccc-cccCCCCCCC
Q 015746          151 ------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAG-IYKPADEPPH  199 (401)
Q Consensus       151 ------~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~-vy~~~~~~~~  199 (401)
                            .++|+|||++|.                    |+.++.++++++    ++.+..+||++||.. +|+.....  
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~--  147 (260)
T PRK08267         70 FAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLA--  147 (260)
T ss_pred             HHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCch--
Confidence                  257999999984                    345555565555    445556899999965 44432211  


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                            .+..+|.+.+.+...       .++++++++||.+........ ...........           ..-.+..+
T Consensus       148 ------~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~-----------~~~~~~~~  209 (260)
T PRK08267        148 ------VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGT-SNEVDAGSTKR-----------LGVRLTPE  209 (260)
T ss_pred             ------hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccc-cchhhhhhHhh-----------ccCCCCHH
Confidence                  112244444333322       378999999999866532210 00000000000           01124679


Q ss_pred             HHHHHHHHHhcCC
Q 015746          273 DLSSMLTLAVENP  285 (401)
Q Consensus       273 D~a~~~~~~~~~~  285 (401)
                      |+++.++.++++.
T Consensus       210 ~va~~~~~~~~~~  222 (260)
T PRK08267        210 DVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.41  E-value=7.2e-12  Score=114.79  Aligned_cols=197  Identities=19%  Similarity=0.234  Sum_probs=119.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~~  148 (401)
                      |.+|||    ||+|+||++++++|+++|++|+++.|.. +.....       ..++.  ...+.++.+|   ++++.+++
T Consensus         1 k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~~   69 (242)
T TIGR01829         1 RIALVT----GGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAW-------LQEQGALGFDFRVVEGDVSSFESCKAAV   69 (242)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-------HHHHHhhCCceEEEEecCCCHHHHHHHH
Confidence            579999    9999999999999999999999998832 211110       00111  1245667776   55555554


Q ss_pred             cC-----CcccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GG-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~-----~~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +.     .++|+|||++|.                    |+.+.    +.++..+++.+.++||++||.........   
T Consensus        70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---  146 (242)
T TIGR01829        70 AKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG---  146 (242)
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC---
Confidence            32     147999999983                    23333    33556666677779999999654321110   


Q ss_pred             CCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          ...+..+|.+.+.+++    +   .++.++.++|+.+.++.... .....+..+....+..         .+...+
T Consensus       147 ----~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~  212 (242)
T TIGR01829       147 ----QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA-MREDVLNSIVAQIPVG---------RLGRPE  212 (242)
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc-cchHHHHHHHhcCCCC---------CCcCHH
Confidence                0111123333222221    1   38999999999998875322 1122233333333221         133678


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      |+++++..++.++.. ..|+++.+.++.
T Consensus       213 ~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       213 EIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            999999888766543 457999998874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.41  E-value=1.7e-12  Score=118.56  Aligned_cols=182  Identities=19%  Similarity=0.194  Sum_probs=126.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++++||    |||+.||..++++|.++||+|+.+.|+.++...+...    +.......++++..|   ++++..+.
T Consensus         4 ~~~~~~lIT----GASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~----l~~~~~v~v~vi~~DLs~~~~~~~l~   75 (265)
T COG0300           4 MKGKTALIT----GASSGIGAELAKQLARRGYNLILVARREDKLEALAKE----LEDKTGVEVEVIPADLSDPEALERLE   75 (265)
T ss_pred             CCCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHH----HHHhhCceEEEEECcCCChhHHHHHH
Confidence            457899999    9999999999999999999999999999877654321    122122346677777   55555544


Q ss_pred             c---C--CcccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 G---G--VTFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~---~--~~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      .   +  ..+|++||+||.                    |    ...+..++.-+.+.+-.++|.++|.+.|-+.     
T Consensus        76 ~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~-----  150 (265)
T COG0300          76 DELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT-----  150 (265)
T ss_pred             HHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-----
Confidence            3   2  358999999994                    2    3446667777777777799999998877543     


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                             |..+.|.+.|...-            .|+.++.|.||.+....         .+  ..+.......   ...-
T Consensus       151 -------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f---------~~--~~~~~~~~~~---~~~~  209 (265)
T COG0300         151 -------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEF---------FD--AKGSDVYLLS---PGEL  209 (265)
T ss_pred             -------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccc---------cc--cccccccccc---chhh
Confidence                   22377887773322            37999999999876652         22  1111111100   1145


Q ss_pred             eeeHHHHHHHHHHHhcCCCc
Q 015746          268 IAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ++..+|+|+..+.++++...
T Consensus       210 ~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         210 VLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             ccCHHHHHHHHHHHHhcCCc
Confidence            67899999999999998764

>PRK12742 oxidoreductase; Provisional

Probab=99.41  E-value=1.4e-11  Score=112.57  Aligned_cols=196  Identities=16%  Similarity=0.194  Sum_probs=119.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .++++||||    ||+|+||++++++|+++|++|+++.|.. +..+.+.          ...++.++.+|   .+.+.+.
T Consensus         4 ~~~k~vlIt----GasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----------~~~~~~~~~~D~~~~~~~~~~   69 (237)
T PRK12742          4 FTGKKVLVL----GGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA----------QETGATAVQTDSADRDAVIDV   69 (237)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH----------HHhCCeEEecCCCCHHHHHHH
Confidence            346899999    9999999999999999999998876643 2211110          01134555666   4556666


Q ss_pred             hcCC-cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCCCC
Q 015746          148 VGGV-TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       148 ~~~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      +... ++|++||++|.                    |+.+..+++..+...  +..++|++||......    +..  ..
T Consensus        70 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~~--~~  143 (237)
T PRK12742         70 VRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM----PVA--GM  143 (237)
T ss_pred             HHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC----CCC--CC
Confidence            5543 37999999984                    334444454433332  2358999999654211    110  01


Q ss_pred             CCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          205 VKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      ..+..+|.+.+.+.+.       .++++++|+||.+..+......  ...+.+....+.         ..+..++|++++
T Consensus       144 ~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~---------~~~~~p~~~a~~  212 (237)
T PRK12742        144 AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--PMKDMMHSFMAI---------KRHGRPEEVAGM  212 (237)
T ss_pred             cchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--HHHHHHHhcCCC---------CCCCCHHHHHHH
Confidence            1223456665554433       3799999999999776432211  111222221111         123578999999


Q ss_pred             HHHHhcCCCc-CCCcEEEecCC
Q 015746          278 LTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       278 ~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      +..++.+... .+|+++.+.++
T Consensus       213 ~~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        213 VAWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             HHHHcCcccCcccCCEEEeCCC
Confidence            9999876554 45788888776

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.41  E-value=4.4e-12  Score=117.73  Aligned_cols=201  Identities=14%  Similarity=0.197  Sum_probs=125.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      .++++|+||    ||+|+||++++++|+++|++ |++++|+.++.....       .++.  ...+.++.+|   ++++.
T Consensus         4 ~~~k~vlIt----Ga~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~   72 (260)
T PRK06198          4 LDGKVALVT----GGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-------AELEALGAKAVFVQADLSDVEDCR   72 (260)
T ss_pred             CCCcEEEEe----CCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-------HHHHhcCCeEEEEEccCCCHHHHH
Confidence            346889999    99999999999999999999 999998765432110       1111  1234455566   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPAD  195 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~  195 (401)
                      ++++..     ++|+|||+++.                    |+.+..++++++.    +.+ ..+||++||...++...
T Consensus        73 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~  152 (260)
T PRK06198         73 RVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP  152 (260)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC
Confidence            655432     47999999983                    3445556655553    332 35799999988765431


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC------CcHHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK------DCEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~  262 (401)
                      .       ...+..+|.+++.+.+.       .+++++.++||+++++....      .....++.......+       
T Consensus       153 ~-------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------  218 (260)
T PRK06198        153 F-------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP-------  218 (260)
T ss_pred             C-------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC-------
Confidence            1       01122355555444332       26889999999998875321      001111222111111       


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        ...+++++|+++++..++.+... ..|+++++.++.
T Consensus       219 --~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        219 --FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             --ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence              23356899999999999876653 457899888764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.41  E-value=3.1e-12  Score=118.18  Aligned_cols=202  Identities=11%  Similarity=0.113  Sum_probs=122.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.++...+..    .+.+. ...+.++.+|   .+++..++
T Consensus         6 l~~k~vlIt----Gas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~   76 (252)
T PRK07035          6 LTGKIALVT----GASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVAD----AIVAA-GGKAEALACHIGEMEQIDALF   76 (252)
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhc-CCeEEEEEcCCCCHHHHHHHH
Confidence            346789999    999999999999999999999999997654332111    00000 1124455555   55555544


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhHHHHH----HHHHhCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll----~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+++.                     |+.+...++    +.+++.+..++|++||...+.+...  
T Consensus        77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  154 (252)
T PRK07035         77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDF--  154 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCC--
Confidence            432     37999999983                     233444444    4445566678999998654332110  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                           ...+..+|.+.+.+++..       |++++.+.||.+..+...... ...+........+.         ..+..
T Consensus       155 -----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  220 (252)
T PRK07035        155 -----QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL---------RRHAE  220 (252)
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC---------CCcCC
Confidence                 011223555555544432       789999999998665321100 01122222222221         12347


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ++|+|+.+..++.+... .+|+++.+.++
T Consensus       221 ~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        221 PSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            89999999998887654 45789988765

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=4.2e-12  Score=116.35  Aligned_cols=181  Identities=18%  Similarity=0.168  Sum_probs=113.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+|+||.+++++|+++|++|++++|+.++...+..    .+.. ...++.++.+|   ++++.++++
T Consensus         6 ~~~~vlVt----G~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK07666          6 QGKNALIT----GAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAE----EVEA-YGVKVVIATADVSDYEEVTAAIE   76 (239)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHH-hCCeEEEEECCCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998754322110    0000 11246667777   566666555


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+++.                    |+.++.++++++.    +.+.+++|++||...+......   
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~---  153 (239)
T PRK07666         77 QLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT---  153 (239)
T ss_pred             HHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC---
Confidence            21     47999999984                    2334444555443    4566789999997755432110   


Q ss_pred             CCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                          ..+..+|.+.+.++.       ..|++++++|||.+.++.....       . ...      +++   ..++..+|
T Consensus       154 ----~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-------~-~~~------~~~---~~~~~~~~  212 (239)
T PRK07666        154 ----SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-------G-LTD------GNP---DKVMQPED  212 (239)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-------c-ccc------cCC---CCCCCHHH
Confidence                011224444333322       2489999999999987632210       0 000      111   23468899


Q ss_pred             HHHHHHHHhcCCC
Q 015746          274 LSSMLTLAVENPE  286 (401)
Q Consensus       274 ~a~~~~~~~~~~~  286 (401)
                      +|+.++.+++++.
T Consensus       213 ~a~~~~~~l~~~~  225 (239)
T PRK07666        213 LAEFIVAQLKLNK  225 (239)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999998763

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.41  E-value=4e-12  Score=122.56  Aligned_cols=188  Identities=14%  Similarity=0.177  Sum_probs=120.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++|+||    ||+|+||++++++|+++|++|++++|+.++.+.+..    .+... ...+.++.+|   .+++.+++
T Consensus         6 l~~k~vlIT----Gas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~----~l~~~-g~~~~~v~~Dv~d~~~v~~~~   76 (334)
T PRK07109          6 IGRQVVVIT----GASAGVGRATARAFARRGAKVVLLARGEEGLEALAA----EIRAA-GGEALAVVADVADAEAVQAAA   76 (334)
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHc-CCcEEEEEecCCCHHHHHHHH
Confidence            346789999    999999999999999999999999998754432111    00000 1235556666   56666554


Q ss_pred             cCC-----cccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+++.                    |    +..++.++..+++.+..+||++||...|....    
T Consensus        77 ~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~----  152 (334)
T PRK07109         77 DRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP----  152 (334)
T ss_pred             HHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC----
Confidence            421     47999999984                    1    33455677777777667899999988875421    


Q ss_pred             CCCCCCCCCCChHHHHHHH---------HH-----hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKYI---------SE-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~---------~e-----~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                              ....|...|..         .|     .++.+++|+|+.+.++...     . .........       ...
T Consensus       153 --------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~-----~-~~~~~~~~~-------~~~  211 (334)
T PRK07109        153 --------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD-----W-ARSRLPVEP-------QPV  211 (334)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh-----h-hhhhccccc-------cCC
Confidence                    11345544432         22     2588999999998765311     1 111111110       111


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~  297 (401)
                      ..+..++|+|++++.+++++.    +.+.+++
T Consensus       212 ~~~~~pe~vA~~i~~~~~~~~----~~~~vg~  239 (334)
T PRK07109        212 PPIYQPEVVADAILYAAEHPR----RELWVGG  239 (334)
T ss_pred             CCCCCHHHHHHHHHHHHhCCC----cEEEeCc
Confidence            235689999999999998863    3455553

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2.4e-12  Score=118.30  Aligned_cols=178  Identities=16%  Similarity=0.170  Sum_probs=113.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+|+||    ||+|+||++++++|+++|++|++++|+.++...+..    ........+++++.+|   .+++.++++.
T Consensus         1 ~~~vlIt----Gas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          1 MKKILII----GATSDIARACARRYAAAGARLYLAARDVERLERLAD----DLRARGAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----HHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence            5789999    999999999999999999999999998754432111    0001112356677777   5566666554


Q ss_pred             C--cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCCCCCC
Q 015746          151 V--TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       151 ~--~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      .  ++|+|||++|.                    |+.++.++++++.    +.+.++||++||...+....       ..
T Consensus        73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------~~  145 (243)
T PRK07102         73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA-------SN  145 (243)
T ss_pred             HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC-------CC
Confidence            3  46999999883                    4455555665543    45667899999965322110       01


Q ss_pred             CCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          205 VKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      ..+..+|.+.+.+.+       ..|++++.++|+.++++....             ..  ..+     ...+.++|+++.
T Consensus       146 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-------------~~--~~~-----~~~~~~~~~a~~  205 (243)
T PRK07102        146 YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-------------LK--LPG-----PLTAQPEEVAKD  205 (243)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-------------cC--CCc-----cccCCHHHHHHH
Confidence            112234444333332       238899999999998762110             00  111     123578999999


Q ss_pred             HHHHhcCCC
Q 015746          278 LTLAVENPE  286 (401)
Q Consensus       278 ~~~~~~~~~  286 (401)
                      ++.++++..
T Consensus       206 i~~~~~~~~  214 (243)
T PRK07102        206 IFRAIEKGK  214 (243)
T ss_pred             HHHHHhCCC
Confidence            999999654

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.40  E-value=5.9e-12  Score=116.50  Aligned_cols=203  Identities=17%  Similarity=0.146  Sum_probs=124.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..++++|||    ||+|.||++++++|+++|++|++++|+.++.+.+..    .+... ..++..+.+|   ++++.+++
T Consensus         7 ~~~k~vlVt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~-~~~~~~~~~D~~~~~~~~~~~   77 (253)
T PRK05867          7 LHGKRALIT----GASTGIGKRVALAYVEAGAQVAIAARHLDALEKLAD----EIGTS-GGKVVPVCCDVSQHQQVTSML   77 (253)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----HHHhc-CCeEEEEEccCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998754432211    00000 1234556666   55665555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||++|.                    |+.+...+++++.    +.+ -.++|++||....-...  +
T Consensus        78 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~  155 (253)
T PRK05867         78 DQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV--P  155 (253)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--C
Confidence            421     48999999983                    3455555555443    333 24799999865321110  0


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                         .....+..+|.+.+.+.+.       .|+++..|+||.+-.+.... . ...........+.         ..+..+
T Consensus       156 ---~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~~~---------~r~~~p  221 (253)
T PRK05867        156 ---QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKIPL---------GRLGRP  221 (253)
T ss_pred             ---CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcCCC---------CCCcCH
Confidence               0011123355555444333       38999999999997764221 1 1112222222221         124578


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|+|++++.++..... .+|+++.+.+|.
T Consensus       222 ~~va~~~~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        222 EELAGLYLYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence            9999999999876443 567999988874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.40  E-value=9.3e-12  Score=115.15  Aligned_cols=200  Identities=14%  Similarity=0.160  Sum_probs=122.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|++|||    ||+|.||+.++++|+++|++|++++|.....  ...    ..... ..++.++.+|   .+++.+++
T Consensus         6 l~~k~~lIt----Gas~gIG~aia~~l~~~G~~vv~~~~~~~~~--~~~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~   74 (251)
T PRK12481          6 LNGKVAIIT----GCNTGLGQGMAIGLAKAGADIVGVGVAEAPE--TQA----QVEAL-GRKFHFITADLIQQKDIDSIV   74 (251)
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCchHHH--HHH----HHHHc-CCeEEEEEeCCCCHHHHHHHH
Confidence            346899999    9999999999999999999999988754211  000    01111 1245566666   66666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||++|.                    |+.+...+.++    +++.+ -.++|++||...+...... 
T Consensus        75 ~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-  153 (251)
T PRK12481         75 SQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV-  153 (251)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC-
Confidence            432     48999999983                    44444444444    33333 2589999998776432111 


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                            ..+..+|.+.+.+.+       .+|+++..|+||.+-.+..... ......+.+....|.         ..+..
T Consensus       154 ------~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~  218 (251)
T PRK12481        154 ------PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA---------SRWGT  218 (251)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC---------CCCcC
Confidence                  112335655544333       2489999999999866532110 000111122222221         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ++|+|+++..++..... ..|+++.+.++
T Consensus       219 peeva~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        219 PDDLAGPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHHHHHHHHHhCccccCcCCceEEECCC
Confidence            89999999999976443 55788888776

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.39  E-value=5.7e-12  Score=116.90  Aligned_cols=175  Identities=16%  Similarity=0.159  Sum_probs=111.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+....+...    +...  .++.++.+|   .+++.++++.
T Consensus         2 ~~~vlIt----Gas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~~--~~~~~~~~Dl~~~~~i~~~~~~   71 (257)
T PRK07024          2 PLKVFIT----GASSGIGQALAREYARQGATLGLVARRTDALQAFAAR----LPKA--ARVSVYAADVRDADALAAAAAD   71 (257)
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cccC--CeeEEEEcCCCCHHHHHHHHHH
Confidence            5799999    9999999999999999999999999987544321110    0000  145666776   5555555433


Q ss_pred             ----C-cccEEEeCCCC---------------------ChhhHHH----HHHHHHhCCCCEEEEecccccc-cCCCCCCC
Q 015746          151 ----V-TFDVVLDNNGK---------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIY-KPADEPPH  199 (401)
Q Consensus       151 ----~-~~d~Vv~~a~~---------------------~~~~~~~----ll~aa~~~gv~~~v~~SS~~vy-~~~~~~~~  199 (401)
                          . .+|++||++|.                     |+.++.+    ++..+++.+.++||++||...+ +.+..   
T Consensus        72 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~---  148 (257)
T PRK07024         72 FIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGA---  148 (257)
T ss_pred             HHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCC---
Confidence                1 37999999983                     2334444    4446666776799999986644 22111   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                           ..+..+|.+.+.+..       ..|++++++|||.+.++....             .....       ..++.++
T Consensus       149 -----~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~-------~~~~~~~  203 (257)
T PRK07024        149 -----GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-------------NPYPM-------PFLMDAD  203 (257)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc-------------CCCCC-------CCccCHH
Confidence                 112234544444332       248999999999998763210             00000       0135799


Q ss_pred             HHHHHHHHHhcCCC
Q 015746          273 DLSSMLTLAVENPE  286 (401)
Q Consensus       273 D~a~~~~~~~~~~~  286 (401)
                      |+++.++.++.+..
T Consensus       204 ~~a~~~~~~l~~~~  217 (257)
T PRK07024        204 RFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999998643

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.39  E-value=2.5e-11  Score=115.60  Aligned_cols=205  Identities=12%  Similarity=0.041  Sum_probs=116.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++......    .+.. .....+.++.+|   .+++.++
T Consensus        14 ~~~k~vlIt----Gas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dl~d~~~v~~~   85 (306)
T PRK06197         14 QSGRVAVVT----GANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAA----RITAATPGADVTLQELDLTSLASVRAA   85 (306)
T ss_pred             CCCCEEEEc----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhCCCCceEEEECCCCCHHHHHHH
Confidence            346899999    999999999999999999999999997654321100    0000 001245667777   5555555


Q ss_pred             hcCC-----cccEEEeCCCC------------------Chhh----HHHHHHHHHhCCCCEEEEeccccccc--CCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYK--PADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~--~~~~~~  198 (401)
                      ++..     ++|+|||+||.                  |+.+    +..+++.+++.+.++||++||.+.+.  ......
T Consensus        86 ~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~  165 (306)
T PRK06197         86 ADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDD  165 (306)
T ss_pred             HHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccc
Confidence            4321     48999999983                  3344    66778888777667999999987543  211111


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEE--EecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWAS--FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~i--lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                      ..+..+. +....|+..|...+            .++++++  +.||.+..+.... . ...+....... .+++.    
T Consensus       166 ~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~-~-~~~~~~~~~~~-~~~~~----  237 (306)
T PRK06197        166 LQWERRY-NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN-L-PRALRPVATVL-APLLA----  237 (306)
T ss_pred             cCcccCC-CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccccc-C-cHHHHHHHHHH-Hhhhc----
Confidence            1111111 12245666664333            2555544  4799987663221 1 11111111100 01111    


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCcCCCcEEEec
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~  296 (401)
                          ...+.-+..++.+...+...+|+.|+..
T Consensus       238 ----~~~~~g~~~~~~~~~~~~~~~g~~~~~~  265 (306)
T PRK06197        238 ----QSPEMGALPTLRAATDPAVRGGQYYGPD  265 (306)
T ss_pred             ----CCHHHHHHHHHHHhcCCCcCCCeEEccC
Confidence                2345666677777666554455666543

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.39  E-value=5.1e-12  Score=117.70  Aligned_cols=206  Identities=16%  Similarity=0.204  Sum_probs=122.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~  147 (401)
                      .+++.+|||    ||+|+||++++++|+++|++|++++|+.++.......    +.+. ....+.++.+|   .+++.++
T Consensus         6 l~~k~~lIt----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~   77 (265)
T PRK07062          6 LEGRVAVVT----GGSSGIGLATVELLLEAGASVAICGRDEERLASAEAR----LREKFPGARLLAARCDVLDEADVAAF   77 (265)
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH----HHhhCCCceEEEEEecCCCHHHHHHH
Confidence            346889999    9999999999999999999999999987654322110    0000 01134455555   5555554


Q ss_pred             hcCC-----cccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|++||++|.                    |    +..++.++..+++.+..++|++||...+...... 
T Consensus        78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  156 (265)
T PRK07062         78 AAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHM-  156 (265)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCc-
Confidence            4321     47999999984                    1    2234555566666666689999997765332110 


Q ss_pred             CCCCCCCCCCCChHHHHHHH----H---HhCCCeEEEecCeeecCCCCCCc---------HHHHHHHHHcCCCcccCCCC
Q 015746          199 HVEGDVVKPDAGHVQVEKYI----S---ENFSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~----~---e~g~~~~ilRp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  262 (401)
                            ..+..+|.+.+.+.    .   +.|++++.|+||.+..+.....+         ...+...+......+     
T Consensus       157 ------~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  225 (265)
T PRK07062        157 ------VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-----  225 (265)
T ss_pred             ------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-----
Confidence                  01112333322222    1   24899999999998765321100         001111111111111     


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                        ...+...+|+|.++..++.+.. ..+|+++.+.++.
T Consensus       226 --~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        226 --LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             --cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence              1124578999999999887644 3557899888763

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.38  E-value=1.9e-11  Score=113.86  Aligned_cols=196  Identities=14%  Similarity=0.205  Sum_probs=120.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+......              .++.++.+|   ++++.+++
T Consensus         7 l~~k~vlIt----G~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~~~~~   68 (266)
T PRK06171          7 LQGKIIIVT----GGSSGIGLAIVKELLANGANVVNADIHGGDGQH--------------ENYQFVPTDVSSAEEVNHTV   68 (266)
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCcccccc--------------CceEEEEccCCCHHHHHHHH
Confidence            346899999    999999999999999999999999987754321              134555555   55666555


Q ss_pred             cCC-----cccEEEeCCCC-----------------------------ChhhHHHHHHHHH----hCCCCEEEEeccccc
Q 015746          149 GGV-----TFDVVLDNNGK-----------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGI  190 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~-----------------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~v  190 (401)
                      +..     ++|+|||++|.                             |+.++..+++++.    +.+..+||++||...
T Consensus        69 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  148 (266)
T PRK06171         69 AEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG  148 (266)
T ss_pred             HHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc
Confidence            432     47999999983                             2334445555554    334458999999776


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeec-CCCCCCc-----------HHHHHHHHH
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIG-SGNNKDC-----------EEWFFDRIV  251 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G-~~~~~~~-----------~~~~~~~~~  251 (401)
                      +.....       ...+..+|.+.+.+.+.       .|+++++|+||.+.. +......           ...+...+.
T Consensus       149 ~~~~~~-------~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (266)
T PRK06171        149 LEGSEG-------QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYT  221 (266)
T ss_pred             cCCCCC-------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhc
Confidence            533211       11122355554443333       389999999998852 2111000           011111111


Q ss_pred             cCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       252 ~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .....+       ...+..++|+|.++..++..... .+|+++++.++.
T Consensus       222 ~~~~~p-------~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        222 KTSTIP-------LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             cccccc-------CCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence            100111       12245789999999999876543 567899888764

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.8e-11  Score=113.80  Aligned_cols=203  Identities=14%  Similarity=0.153  Sum_probs=123.7

Q ss_pred             cccCeEEEEecCCCccc-cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHA-VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG-~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~  146 (401)
                      ..++++|||    ||+| .||+.+++.|+++|++|++++|+.++.+....    .+.. .....+.++.+|   .+++.+
T Consensus        15 ~~~k~vlIt----G~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~   86 (262)
T PRK07831         15 LAGKVVLVT----AAAGTGIGSATARRALEEGARVVISDIHERRLGETAD----ELAAELGLGRVEAVVCDVTSEAQVDA   86 (262)
T ss_pred             cCCCEEEEE----CCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HHHHhcCCceEEEEEccCCCHHHHHH
Confidence            346899999    9998 69999999999999999999887754332110    0000 011245666677   555665


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~g-v~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||++|.                    |+.+...+++++    +..+ -.++|++||...+.... 
T Consensus        87 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-  165 (262)
T PRK07831         87 LIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH-  165 (262)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-
Confidence            55432     47999999983                    344444444443    3333 35799998865432211 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            ....+..+|.+.+.+.+.       +|+++..|+||.++.+.............+....++.         -+.
T Consensus       166 ------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------r~~  230 (262)
T PRK07831        166 ------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFG---------RAA  230 (262)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCC---------CCc
Confidence                  011122355554443332       3789999999999887432111122233333333321         234


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      .++|+|++++.++.+... ..|+++.+.++
T Consensus       231 ~p~~va~~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        231 EPWEVANVIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCceEEeCCC
Confidence            689999999999887643 45788887764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.37  E-value=9.6e-12  Score=115.64  Aligned_cols=204  Identities=13%  Similarity=0.131  Sum_probs=120.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .++++||||    ||++.||++++++|+++|++|+++.|.. +.......    .+.......+.++.+|   ++++.++
T Consensus         6 l~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~   77 (260)
T PRK08416          6 MKGKTLVIS----GGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAE----DLEQKYGIKAKAYPLNILEPETYKEL   77 (260)
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            456899999    9999999999999999999998886643 22211100    0001111245666666   5566655


Q ss_pred             hcCC-----cccEEEeCCCC--------------------------Ch----hhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      ++..     ++|++||+|+.                          |+    ..++.++..+++.+..+||++||...+.
T Consensus        78 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (260)
T PRK08416         78 FKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV  157 (260)
T ss_pred             HHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc
Confidence            5432     47999999962                          11    1123344445555556899999975432


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcc
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                      ...       ....+..+|.+.+.+.+.       .|+++..|.||.+-.+.... .-............+.        
T Consensus       158 ~~~-------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--------  222 (260)
T PRK08416        158 YIE-------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL--------  222 (260)
T ss_pred             CCC-------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC--------
Confidence            111       011233467666554433       38999999999886542110 0001111112222221        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       ..+..++|+|.+++.++..... ..|+.+.+.++.
T Consensus       223 -~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        223 -NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             -CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence             1245789999999999876543 457888887764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.1e-11  Score=113.80  Aligned_cols=173  Identities=16%  Similarity=0.125  Sum_probs=115.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      |++|+||    ||+|+||++++++|+++|++|++++|+.+....+...         ..++.++.+|   .+++.++++.
T Consensus         1 ~~~vlIt----Gas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~   67 (240)
T PRK06101          1 MTAVLIT----GATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ---------SANIFTLAFDVTDHPGTKAALSQ   67 (240)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---------cCCCeEEEeeCCCHHHHHHHHHh
Confidence            4689999    9999999999999999999999999987543322110         1245566666   6777777665


Q ss_pred             C--cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccc-cccCCCCCCCCCCCCC
Q 015746          151 V--TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAG-IYKPADEPPHVEGDVV  205 (401)
Q Consensus       151 ~--~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~-vy~~~~~~~~~E~~~~  205 (401)
                      .  .+|.+||++|.                    |+.++.++++++...  +.+++|++||.. .++....        .
T Consensus        68 ~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------~  139 (240)
T PRK06101         68 LPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRA--------E  139 (240)
T ss_pred             cccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCC--------c
Confidence            3  37899998872                    456677888877652  224799988854 3322111        1


Q ss_pred             CCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          206 KPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       206 ~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      .+..+|.+.+.+.+       ..|++++++|||.++++.....             ....       ...+..+|+|+.+
T Consensus       140 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-------------~~~~-------~~~~~~~~~a~~i  199 (240)
T PRK06101        140 AYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-------------TFAM-------PMIITVEQASQEI  199 (240)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-------------CCCC-------CcccCHHHHHHHH
Confidence            12235555554432       2489999999999988743210             0000       0135899999999


Q ss_pred             HHHhcCCCc
Q 015746          279 TLAVENPEA  287 (401)
Q Consensus       279 ~~~~~~~~~  287 (401)
                      +.+++....
T Consensus       200 ~~~i~~~~~  208 (240)
T PRK06101        200 RAQLARGKS  208 (240)
T ss_pred             HHHHhcCCC
Confidence            999988643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=5.2e-11  Score=110.38  Aligned_cols=203  Identities=14%  Similarity=0.112  Sum_probs=122.0

Q ss_pred             ccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCccc----CCCCCCCcccchh--cCCCeEEEcC---H
Q 015746           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDK----MKKPPFNRFNEIV--SAGGKTVWGD---P  141 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~l~--~~~~~~~~~D---~  141 (401)
                      ++++||||    ||+|  .||.+++++|+++|++|++++|++.....    ..........++.  ...++++.+|   .
T Consensus         4 ~~k~vlIt----Gas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   79 (256)
T PRK12748          4 MKKIALVT----GASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP   79 (256)
T ss_pred             CCcEEEEe----CCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            45789999    9996  69999999999999999999987321100    0000000000111  1246677777   4


Q ss_pred             hhHHHhhcC-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEeccccccc
Q 015746          142 AEVGNVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYK  192 (401)
Q Consensus       142 ~~~~~~~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~  192 (401)
                      +++..+++.     .++|+|||+++.                    |+.++.++++++..    .+.++||++||...+.
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            444444432     147999999983                    45666677776643    2445899999987665


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                      +...       ...+..+|.+.+.+++.       .+++++.++||.+..+....    .....+....+.         
T Consensus       160 ~~~~-------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~~~~---------  219 (256)
T PRK12748        160 PMPD-------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----ELKHHLVPKFPQ---------  219 (256)
T ss_pred             CCCC-------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hHHHhhhccCCC---------
Confidence            3211       01122355555554333       37899999999887653221    111112111111         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+...+|+++.+..++..... ..|+++++.++.
T Consensus       220 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        220 GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence            1133579999999888876543 447899998763

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.36  E-value=2.1e-11  Score=113.41  Aligned_cols=198  Identities=18%  Similarity=0.172  Sum_probs=121.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.++...+..       ++ ..++.++.+|   .+++.++++
T Consensus         5 ~~k~vlVt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~   72 (263)
T PRK06200          5 HGQVALIT----GGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ-------RF-GDHVLVVEGDVTSYADNQRAVD   72 (263)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hh-CCcceEEEccCCCHHHHHHHHH
Confidence            45799999    999999999999999999999999998754432211       11 1245666666   555555544


Q ss_pred             CC-----cccEEEeCCCC-------------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCC
Q 015746          150 GV-----TFDVVLDNNGK-------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~  195 (401)
                      ..     ++|++||++|.                         |+.+...+++++.    +.+ .++|++||...+....
T Consensus        73 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~  151 (263)
T PRK06200         73 QTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGG  151 (263)
T ss_pred             HHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCC
Confidence            32     48999999984                         1223334444443    333 4799999987764321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH----h--CCCeEEEecCeeecCCCCCC----------cHHHHHHHHHcCCCcccC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e----~--g~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~~~  259 (401)
                      ..       ..+..+|.+.+.+.+.    .  ++++..|.||.+..+.....          ..+...+.+....|    
T Consensus       152 ~~-------~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  220 (263)
T PRK06200        152 GG-------PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP----  220 (263)
T ss_pred             CC-------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC----
Confidence            11       1122355554444333    2  57899999999876532110          00001111111111    


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCC-Cc-CCCcEEEecCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENP-EA-ASSNIFNLVSDR  299 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~-~~-~~g~~~~~~~~~  299 (401)
                           ..-+..++|+|.+++.++.+. .. ..|+++.+.+|.
T Consensus       221 -----~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        221 -----LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             -----CCCCCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence                 123457899999999988765 33 457899888763

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.35  E-value=2.2e-11  Score=113.17  Aligned_cols=199  Identities=18%  Similarity=0.202  Sum_probs=117.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+|.||+.++++|+++|++|++++|+.+.......    ++...  .++.++.+|   .+++.++++..
T Consensus         1 m~vlIt----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~--~~~~~~~~Dv~d~~~~~~~~~~~   70 (259)
T PRK08340          1 MNVLVT----ASSRGIGFNVARELLKKGARVVISSRNEENLEKALK----ELKEY--GEVYAVKADLSDKDDLKNLVKEA   70 (259)
T ss_pred             CeEEEE----cCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HHHhc--CCceEEEcCCCCHHHHHHHHHHH
Confidence            689999    999999999999999999999999998754332111    00110  145566666   56666655421


Q ss_pred             -----cccEEEeCCCCC----------------------hhh----HHHHHHHHH-hCCCCEEEEecccccccCCCCCCC
Q 015746          152 -----TFDVVLDNNGKN----------------------LDA----VRPVADWAK-SSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       152 -----~~d~Vv~~a~~~----------------------~~~----~~~ll~aa~-~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                           ++|+|||++|..                      +.+    +..++..+. +.+..+||++||...+.+....  
T Consensus        71 ~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~--  148 (259)
T PRK08340         71 WELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPL--  148 (259)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCc--
Confidence                 489999999841                      111    222333333 3344589999998765322100  


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc----------HHH-HHHHHHcCCCcccCCC
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----------EEW-FFDRIVRKRPVPIPGS  261 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~----------~~~-~~~~~~~~~~~~~~~~  261 (401)
                           ..+..+|.+.+.+.+.       .|+++..|.||.+-.+......          ... ..+.+....|      
T Consensus       149 -----~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------  217 (259)
T PRK08340        149 -----VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP------  217 (259)
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC------
Confidence                 0111234443333222       2788899999988665321100          000 0011111111      


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                         ..-+..++|+|+++..++..... .+|+++.+.++.
T Consensus       218 ---~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        218 ---LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             ---ccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence               12245789999999999986543 567888888774

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.35  E-value=3.8e-12  Score=133.37  Aligned_cols=212  Identities=15%  Similarity=0.183  Sum_probs=122.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+....+..    .+.. .....+..+.+|   .+++.++
T Consensus       412 l~gkvvLVT----GasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~----~l~~~~~~~~~~~v~~Dvtd~~~v~~a  483 (676)
T TIGR02632       412 LARRVAFVT----GGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAA----EINGQFGAGRAVALKMDVTDEQAVKAA  483 (676)
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----HHHhhcCCCcEEEEECCCCCHHHHHHH
Confidence            456899999    999999999999999999999999998754332110    0000 011134456666   6666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCC-CEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGV-KQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~~~  197 (401)
                      +...     ++|+|||+||.                    |+.+    ++.++..+++.+. .+||++||...+..... 
T Consensus       484 ~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~-  562 (676)
T TIGR02632       484 FADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN-  562 (676)
T ss_pred             HHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC-
Confidence            5532     47999999994                    1222    2344455555542 48999999654322111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeee-cCCCCCCcHHHHHHHHH-cCCC----cccCCCCcc
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMI-GSGNNKDCEEWFFDRIV-RKRP----VPIPGSGMQ  264 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~  264 (401)
                            ...+..+|.+.+.+++.       .|++++.|+|+.|+ |.+.....  +...+.. .+..    ...+.....
T Consensus       563 ------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~  634 (676)
T TIGR02632       563 ------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGE--WREERAAAYGIPADELEEHYAKRTL  634 (676)
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccccc--chhhhhhcccCChHHHHHHHHhcCC
Confidence                  00111233333333322       27899999999987 33211100  0000000 0100    001111222


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~  300 (401)
                      ...+++++|+|++++.++.... ...|+++++.+|..
T Consensus       635 l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       635 LKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             cCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            3456799999999999887543 34579999988753

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.34  E-value=2.4e-11  Score=113.29  Aligned_cols=202  Identities=16%  Similarity=0.185  Sum_probs=121.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||.+++++|+++|++|++++|+.+.......    .+... ..++.++.+|   .+++.++++
T Consensus         8 ~~k~ilIt----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          8 AGKNVVVV----GGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVA----QLQQA-GPEGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHh-CCceEEEECCCCCHHHHHHHHH
Confidence            45799999    999999999999999999999999998754322110    01100 1234555666   566666554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      ..     ++|+|||+++.                    |+.++.++++++...   .-++||++||...+.....     
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~-----  153 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM-----  153 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC-----
Confidence            42     47999999872                    466666777665432   1258999999765422110     


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcH--HHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE--EWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                        ...+..+|.+.+.+.+.       .+++++.++||.+.+........  ..+...+...  .+       ...+...+
T Consensus       154 --~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~  222 (264)
T PRK07576        154 --QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--VP-------LKRNGTKQ  222 (264)
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--CC-------CCCCCCHH
Confidence              00011234443333332       37889999999887532111000  0011111111  11       12345789


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      |+|++++.++..+.. .+|+.+.+.++.
T Consensus       223 dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        223 DIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHHHHHHcChhhcCccCCEEEECCCc
Confidence            999999999986443 456888888764

>TIGR02415 23BDH acetoin reductases

Probab=99.34  E-value=3.3e-11  Score=111.33  Aligned_cols=201  Identities=15%  Similarity=0.155  Sum_probs=118.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++|||    ||+|+||.+++++|+++|++|+++.|+.+....+.       .++.  ...+.++.+|   ++++.+++.
T Consensus         1 k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~i~~~~~   69 (254)
T TIGR02415         1 KVALVT----GGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-------KEINQAGGKAVAYKLDVSDKDQVFSAID   69 (254)
T ss_pred             CEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            479999    99999999999999999999999998764332110       1111  1235666666   555555543


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCC-CEEEEeccccc-ccCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGV-KQFLFISSAGI-YKPADEPP  198 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~----ll~aa~~~gv-~~~v~~SS~~v-y~~~~~~~  198 (401)
                      ..     ++|+|||+++.                    |+.+...    ++..+++.+. ++||++||... ++....  
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  147 (254)
T TIGR02415        70 QAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPIL--  147 (254)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCC--
Confidence            32     47999999984                    2333333    3444444442 58999998654 332211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc--CCCcc----cCCCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVP----IPGSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~  265 (401)
                            ..+..+|.+.+.+.+.       .++.+.+++||.+..+....     +......  +.+..    .+......
T Consensus       148 ------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (254)
T TIGR02415       148 ------SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE-----IDEETSEIAGKPIGEGFEEFSSEIAL  216 (254)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh-----hhhhhhhcccCchHHHHHHHHhhCCC
Confidence                  1122356555544432       27889999999886653111     1100000  00000    00000011


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+.+++|+++++..++++... .+|+++.+.++.
T Consensus       217 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       217 GRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             CCCCCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence            2356889999999999988654 456788777664

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.34  E-value=1e-11  Score=110.46  Aligned_cols=181  Identities=17%  Similarity=0.183  Sum_probs=115.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhhHHHhhc-
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG-  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~~~~~-  149 (401)
                      .|.|+||    ||++.||..++++|.++|++|++..|+.++...+...       +....+.....   |.+++..+++ 
T Consensus         6 ~kv~lIT----GASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~-------~~~~~~~~~~~DVtD~~~~~~~i~~   74 (246)
T COG4221           6 GKVALIT----GASSGIGEATARALAEAGAKVVLAARREERLEALADE-------IGAGAALALALDVTDRAAVEAAIEA   74 (246)
T ss_pred             CcEEEEe----cCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHh-------hccCceEEEeeccCCHHHHHHHHHH
Confidence            4789999    9999999999999999999999999999877654321       11112333334   4555444433 


Q ss_pred             ---CC-cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          150 ---GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       150 ---~~-~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                         .. ++|++||+||.                    |+.+    ++.++..+.+.+-.++|.+||++..-..       
T Consensus        75 ~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y-------  147 (246)
T COG4221          75 LPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY-------  147 (246)
T ss_pred             HHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC-------
Confidence               33 38999999993                    4444    4555556666666699999997732111       


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC-CcH--HHHHHHHHcCCCcccCCCCccee
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK-DCE--EWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                           |..+-|++.|+...            .+++++.|-||.+-...... .+-  ..-.+...            ...
T Consensus       148 -----~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~~  210 (246)
T COG4221         148 -----PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KGG  210 (246)
T ss_pred             -----CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh------------ccC
Confidence                 11134444443222            27899999999885432110 000  00011111            113


Q ss_pred             eeeeHHHHHHHHHHHhcCCCcCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEAAS  289 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~~~  289 (401)
                      .++..+|+|+.+..+++.|...+
T Consensus       211 ~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         211 TALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             CCCCHHHHHHHHHHHHhCCCccc
Confidence            45689999999999999998754

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.34  E-value=2.9e-11  Score=112.05  Aligned_cols=179  Identities=13%  Similarity=0.160  Sum_probs=112.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCC-cccCCCCCCCcccchhcCCCeEEEcC---HhhHHH-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN-  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~-  146 (401)
                      ..++||||    ||+|.||++++++|+++| ++|++++|+.+. .+.+..    .+......+++++.+|   .+++.+ 
T Consensus         7 ~~~~vlIt----Gas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~----~l~~~~~~~v~~~~~D~~~~~~~~~~   78 (253)
T PRK07904          7 NPQTILLL----GGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVA----QMKAAGASSVEVIDFDALDTDSHPKV   78 (253)
T ss_pred             CCcEEEEE----cCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHH----HHHhcCCCceEEEEecCCChHHHHHH
Confidence            45789999    999999999999999995 899999998764 222110    1111111256677777   444333 


Q ss_pred             ---hhcCCcccEEEeCCCCC--------------------h----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          147 ---VVGGVTFDVVLDNNGKN--------------------L----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       147 ---~~~~~~~d~Vv~~a~~~--------------------~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                         +.+.-++|++||++|..                    +    ..++.+++++++.+..+||++||...+....  + 
T Consensus        79 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~--~-  155 (253)
T PRK07904         79 IDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRR--S-  155 (253)
T ss_pred             HHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCC--C-
Confidence               33222589999988742                    1    2234577788888778999999976432211  0 


Q ss_pred             CCCCCCCCCCChHHHHHH-------HHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~-------~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          ...+..+|.+...+       +...++++++++||.+..+...         ..   ...         ...+..+
T Consensus       156 ----~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~---------~~---~~~---------~~~~~~~  210 (253)
T PRK07904        156 ----NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA---------HA---KEA---------PLTVDKE  210 (253)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc---------cC---CCC---------CCCCCHH
Confidence                00112234333211       2234899999999999875211         00   000         1135889


Q ss_pred             HHHHHHHHHhcCCCc
Q 015746          273 DLSSMLTLAVENPEA  287 (401)
Q Consensus       273 D~a~~~~~~~~~~~~  287 (401)
                      |+|+.++.++++...
T Consensus       211 ~~A~~i~~~~~~~~~  225 (253)
T PRK07904        211 DVAKLAVTAVAKGKE  225 (253)
T ss_pred             HHHHHHHHHHHcCCC
Confidence            999999999987654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.33  E-value=2.3e-11  Score=112.26  Aligned_cols=195  Identities=16%  Similarity=0.151  Sum_probs=113.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ||+||||    ||+|+||++++++|+++|++|++++|... ....+.        .....+++++.+|   .+++.++++
T Consensus         1 ~k~vlIt----GasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~   68 (251)
T PRK06924          1 MRYVIIT----GTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA--------EQYNSNLTFHSLDLQDVHELETNFN   68 (251)
T ss_pred             CcEEEEe----cCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH--------hccCCceEEEEecCCCHHHHHHHHH
Confidence            4789999    99999999999999999999999999762 221111        1112356667776   555655554


Q ss_pred             CC---------cccEEEeCCCC---------------------Chhh----HHHHHHHHHhC-CCCEEEEecccccccCC
Q 015746          150 GV---------TFDVVLDNNGK---------------------NLDA----VRPVADWAKSS-GVKQFLFISSAGIYKPA  194 (401)
Q Consensus       150 ~~---------~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~-gv~~~v~~SS~~vy~~~  194 (401)
                      ..         ..+.+||++|.                     |+.+    ++.++..+++. +.++||++||...+...
T Consensus        69 ~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  148 (251)
T PRK06924         69 EILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY  148 (251)
T ss_pred             HHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC
Confidence            32         11278888773                     3333    44555656554 34589999997654322


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH----H-----hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCC
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~----e-----~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~  260 (401)
                      ..       ...+..+|.+.+.+.+    +     .++++..|+||.+-.+....     ......++......+     
T Consensus       149 ~~-------~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----  216 (251)
T PRK06924        149 FG-------WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKE-----  216 (251)
T ss_pred             CC-------cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhh-----
Confidence            10       0111224444333332    2     26788999999886542110     000000111111000     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEec
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~  296 (401)
                      .    .-+..++|+|+.++.++.+....+|+++.+.
T Consensus       217 ~----~~~~~~~dva~~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        217 E----GKLLSPEYVAKALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             c----CCcCCHHHHHHHHHHHHhcccCCCCCEeehh
Confidence            0    1246899999999999987555556777654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.33  E-value=4.4e-11  Score=122.38  Aligned_cols=199  Identities=17%  Similarity=0.182  Sum_probs=124.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .++++|||    ||+|.||.+++++|+++|++|++++|+.++...+...       + ...+..+.+|   ++++.++++
T Consensus       268 ~~k~~lIt----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~  335 (520)
T PRK06484        268 SPRVVAIT----GGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEA-------L-GDEHLSVQADITDEAAVESAFA  335 (520)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h-CCceeEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110       1 1133344555   666666554


Q ss_pred             CC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      ..     ++|++||+||.                     |+.++.++++++...  +-.+||++||...+......    
T Consensus       336 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  411 (520)
T PRK06484        336 QIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPR----  411 (520)
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCC----
Confidence            32     48999999983                     455666666665442  23589999997765432110    


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                         ..+..+|.+.+.+.+.       .|++++.|+||.+.++.....  ........+.+..+..         .+..++
T Consensus       412 ---~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  479 (520)
T PRK06484        412 ---NAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLG---------RLGDPE  479 (520)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCC---------CCcCHH
Confidence               1122244444333222       379999999999987632110  0001122222222221         235789


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      |+|++++.++..... .+|+++.+.++.
T Consensus       480 dia~~~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        480 EVAEAIAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHHHHHHHHhCccccCccCcEEEECCCc
Confidence            999999999876543 557999988764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.32  E-value=7.2e-11  Score=108.49  Aligned_cols=142  Identities=18%  Similarity=0.146  Sum_probs=91.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.++..  .        .....++.++.+|   .+++.+++..
T Consensus         1 ~~~vlIt----GasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~--------~~~~~~~~~~~~D~~~~~~~~~~~~~   66 (243)
T PRK07023          1 AVRAIVT----GHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A--------AAAGERLAEVELDLSDAAAAAAWLAG   66 (243)
T ss_pred             CceEEEe----cCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h--------hccCCeEEEEEeccCCHHHHHHHHHH
Confidence            5799999    99999999999999999999999998764311  0        0011245556666   5555553322


Q ss_pred             ---------CcccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          151 ---------VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       151 ---------~~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                               ..+|.+||+++.                     |+.+    ++.+++.+++.+.++||++||...+.....
T Consensus        67 ~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  146 (243)
T PRK07023         67 DLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG  146 (243)
T ss_pred             HHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC
Confidence                     247999999883                     2333    444555555555679999999876643211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------hCCCeEEEecCeeecC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------NFSNWASFRPQYMIGS  236 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------~g~~~~ilRp~~v~G~  236 (401)
                      .       ..+..+|.+++.+++.      .++++..|+||.+-.+
T Consensus       147 ~-------~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        147 W-------SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             c-------hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            0       0112234444444431      3788999999987544

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.32  E-value=8.1e-12  Score=115.07  Aligned_cols=178  Identities=18%  Similarity=0.200  Sum_probs=111.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++|||    ||+|+||++++++|+++|++|++++|+.++...+...    +.. .....+.++.+|   .+++.++++
T Consensus         2 ~k~vlIt----Gas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (248)
T PRK08251          2 RQKILIT----GASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAE----LLARYPGIKVAVAALDVNDHDQVFEVFA   73 (248)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHhhCCCceEEEEEcCCCCHHHHHHHHH
Confidence            5789999    9999999999999999999999999987544322110    000 001245667777   555555544


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||++|.                    |+.+..++++++    ++.+.++||++||...+..... +  
T Consensus        74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~--  150 (248)
T PRK08251         74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG-V--  150 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC-C--
Confidence            22     47999999983                    344444455544    4556779999999664322110 0  


Q ss_pred             CCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                         ...+..+|.+.+.+...       .+++++.++||++.++....          ...           ....+..+|
T Consensus       151 ---~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~----------~~~-----------~~~~~~~~~  206 (248)
T PRK08251        151 ---KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK----------AKS-----------TPFMVDTET  206 (248)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc----------ccc-----------CCccCCHHH
Confidence               01112344444333322       26889999999987652211          000           012467899


Q ss_pred             HHHHHHHHhcCCC
Q 015746          274 LSSMLTLAVENPE  286 (401)
Q Consensus       274 ~a~~~~~~~~~~~  286 (401)
                      .++.++.++++..
T Consensus       207 ~a~~i~~~~~~~~  219 (248)
T PRK08251        207 GVKALVKAIEKEP  219 (248)
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999998654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.32  E-value=1.1e-10  Score=108.12  Aligned_cols=200  Identities=10%  Similarity=0.077  Sum_probs=118.7

Q ss_pred             cccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .++|+++||    ||+  +.||+.++++|+++|++|++..|+.. ...       ...++....+.++.+|   ++++.+
T Consensus         5 l~~k~~lIt----Gas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~~-------~~~~~~~~~~~~~~~Dl~~~~~v~~   72 (252)
T PRK06079          5 LSGKKIVVM----GVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MKK-------SLQKLVDEEDLLVECDVASDESIER   72 (252)
T ss_pred             cCCCEEEEe----CCCCCCchHHHHHHHHHHCCCEEEEecCchH-HHH-------HHHhhccCceeEEeCCCCCHHHHHH
Confidence            346899999    999  79999999999999999999988732 111       1112222245666677   555555


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|++||++|.                        |+.+...+.+++...  .-.++|++||........
T Consensus        73 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~  152 (252)
T PRK06079         73 AFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIP  152 (252)
T ss_pred             HHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCC
Confidence            44331     48999999983                        233333444433321  124799999865432110


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                             ....+..+|.+.+.+.+.       .|+++..|.||.|-.+.... .....+.+.+....+.         ..
T Consensus       153 -------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r  216 (252)
T PRK06079        153 -------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD---------GV  216 (252)
T ss_pred             -------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc---------cC
Confidence                   001122345444433322       38999999999997653211 0011222222222221         12


Q ss_pred             eeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      +..++|+|+++..++.... ...|+++.+.++.
T Consensus       217 ~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        217 GVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             CCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            4578999999999997654 3557888887763

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.32  E-value=5.7e-11  Score=109.96  Aligned_cols=200  Identities=14%  Similarity=0.141  Sum_probs=122.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..++.+|||    ||+|.||++++++|+++|++|+++++.....  ..    ..+..+ ...+..+.+|   .+++.+++
T Consensus         8 l~~k~~lIt----G~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~--~~----~~~~~~-~~~~~~~~~Dl~~~~~~~~~~   76 (253)
T PRK08993          8 LEGKVAVVT----GCDTGLGQGMALGLAEAGCDIVGINIVEPTE--TI----EQVTAL-GRRFLSLTADLRKIDGIPALL   76 (253)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEecCcchHH--HH----HHHHhc-CCeEEEEECCCCCHHHHHHHH
Confidence            446899999    9999999999999999999999887653210  00    001111 1234555566   56666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||++|.                    |+.+..++++++.    +.+ -.++|++||...+...... 
T Consensus        77 ~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  155 (253)
T PRK08993         77 ERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV-  155 (253)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC-
Confidence            432     48999999983                    4556666666543    333 2479999998776543211 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                            ..+..+|.+.+.+.+.       .|+++..++||.+..+...... .......+...-+.         .-+..
T Consensus       156 ------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~  220 (253)
T PRK08993        156 ------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA---------GRWGL  220 (253)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC---------CCCcC
Confidence                  1223456655444332       3889999999999776321100 00011112211111         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      .+|+|+.++.++.+... ..|+++.+.++
T Consensus       221 p~eva~~~~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        221 PSDLMGPVVFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            89999999999986544 45788887765

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.32  E-value=4.3e-11  Score=111.27  Aligned_cols=201  Identities=19%  Similarity=0.184  Sum_probs=119.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..++++|||    ||+|.||.+++++|+++|++|+++.|+.... ..+.       .++.  ...+.++.+|   .+++.
T Consensus         5 ~~~k~~lIt----Ga~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~i~   73 (261)
T PRK08936          5 LEGKVVVIT----GGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA-------EEIKKAGGEAIAVKGDVTVESDVV   73 (261)
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHHcCCeEEEEEecCCCHHHHH
Confidence            356899999    9999999999999999999999888854321 1100       1111  1234455556   55555


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCC-CEEEEecccccccCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGV-KQFLFISSAGIYKPAD  195 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~  195 (401)
                      ++++..     ++|++||+++.                    |+.+    ++.+++.+++.+. .++|++||...+....
T Consensus        74 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~  153 (261)
T PRK08936         74 NLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP  153 (261)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC
Confidence            544321     47999999994                    2222    3445566666553 5899999965432211


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHH----HH---hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYI----SE---NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~----~e---~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                      .       ...+..+|.+.+.+.    .+   .+++++.|+||.+..+.....+ .......+....+.         ..
T Consensus       154 ~-------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~  217 (261)
T PRK08936        154 L-------FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM---------GY  217 (261)
T ss_pred             C-------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC---------CC
Confidence            0       001222443332222    22   3899999999999887532211 11112222222221         12


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +...+|+++.+..++..... .+|..+.+.++.
T Consensus       218 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        218 IGKPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEECCCc
Confidence            45789999999998886543 556788777664

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.31  E-value=4.3e-11  Score=113.31  Aligned_cols=181  Identities=15%  Similarity=0.179  Sum_probs=110.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++|+||    ||+|+||++++++|+++|++|++++|+.+..+.+..    .+... ...+.++.+|   .+++.+++
T Consensus        38 ~~~k~vlIt----GasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~----~l~~~-~~~~~~~~~Dl~d~~~v~~~~  108 (293)
T PRK05866         38 LTGKRILLT----GASSGIGEAAAEQFARRGATVVAVARREDLLDAVAD----RITRA-GGDAMAVPCDLSDLDAVDALV  108 (293)
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhc-CCcEEEEEccCCCHHHHHHHH
Confidence            345889999    999999999999999999999999998754432211    00000 1234555666   56666665


Q ss_pred             cC----C-cccEEEeCCCCC----------------------hhhH----HHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          149 GG----V-TFDVVLDNNGKN----------------------LDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       149 ~~----~-~~d~Vv~~a~~~----------------------~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +.    . ++|+|||++|..                      +.+.    +.++..+++.+..++|++||.+++....  
T Consensus       109 ~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  186 (293)
T PRK05866        109 ADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS--  186 (293)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--
Confidence            52    1 479999999841                      2222    3334445566767999999987654211  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                      +.    ...+..+|.+.+.+.+.       .++++++++||.+-.+....         .   .  ..  .+   ...+.
T Consensus       187 p~----~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~---------~---~--~~--~~---~~~~~  243 (293)
T PRK05866        187 PL----FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP---------T---K--AY--DG---LPALT  243 (293)
T ss_pred             CC----cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc---------c---c--cc--cC---CCCCC
Confidence            10    01122244443332222       27899999999875542110         0   0  00  01   12357


Q ss_pred             HHHHHHHHHHHhcCCC
Q 015746          271 VRDLSSMLTLAVENPE  286 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~  286 (401)
                      .+|+|+.++.++++..
T Consensus       244 pe~vA~~~~~~~~~~~  259 (293)
T PRK05866        244 ADEAAEWMVTAARTRP  259 (293)
T ss_pred             HHHHHHHHHHHHhcCC
Confidence            8999999999998643

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.31  E-value=4.9e-11  Score=110.75  Aligned_cols=203  Identities=12%  Similarity=0.162  Sum_probs=120.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++|+||    ||+|.||+.+++.|+++|++|++++|+.++...+..    .+......++.++.+|   .+++.++++
T Consensus         6 ~~k~vlIt----G~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          6 AGKRVLIT----GASKGIGAAAAEAFAAEGCHLHLVARDADALEALAA----DLRAAHGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            45899999    999999999999999999999999998754432110    0111111245556665   666766665


Q ss_pred             CC-cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCCCCCCCC
Q 015746          150 GV-TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       150 ~~-~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      .. ++|++||++|.                    |+.+...+++    .+++.+-.++|++||........  .+     
T Consensus        78 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--~~-----  150 (259)
T PRK06125         78 EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA--DY-----  150 (259)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC--Cc-----
Confidence            43 48999999983                    3344434444    44555445899999865432110  00     


Q ss_pred             CCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc---------HHHHHHHHHcCCCcccCCCCcceeee
Q 015746          205 VKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                      ..+..+|.+.+.+.+.       .|++++.|.||.+..+.....+         ............+         ...+
T Consensus       151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  221 (259)
T PRK06125        151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLP---------LGRP  221 (259)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCC---------cCCC
Confidence            0011234443333322       3789999999998765210000         0000011111111         1124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..++|+|++++.++.+... .+|+++.+.++.
T Consensus       222 ~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        222 ATPEEVADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             cCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence            5889999999999876544 467899888774

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.30  E-value=3.9e-11  Score=104.76  Aligned_cols=202  Identities=18%  Similarity=0.200  Sum_probs=134.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC--Hhh-HHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAE-VGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D--~~~-~~~~~~~~  151 (401)
                      .++++.    |+.||.|+++++.....|+.|..+.|+..+.-          .+-....+.+.++|  ..+ +...+.+ 
T Consensus        53 e~tlvl----ggnpfsgs~vlk~A~~vv~svgilsen~~k~~----------l~sw~~~vswh~gnsfssn~~k~~l~g-  117 (283)
T KOG4288|consen   53 EWTLVL----GGNPFSGSEVLKNATNVVHSVGILSENENKQT----------LSSWPTYVSWHRGNSFSSNPNKLKLSG-  117 (283)
T ss_pred             HHHhhh----cCCCcchHHHHHHHHhhceeeeEeecccCcch----------hhCCCcccchhhccccccCcchhhhcC-
Confidence            579999    99999999999999999999999999874321          11111245555555  122 3344444 


Q ss_pred             cccEEEeCCCC----------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHH-H
Q 015746          152 TFDVVLDNNGK----------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-E  220 (401)
Q Consensus       152 ~~d~Vv~~a~~----------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~-e  220 (401)
                       +..++.+++.          |-....+.+.++.++|+++|+|+|.... |-.   ++.   +..+..+|+++|.-+. .
T Consensus       118 -~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~~~---~~i---~rGY~~gKR~AE~Ell~~  189 (283)
T KOG4288|consen  118 -PTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-GLP---PLI---PRGYIEGKREAEAELLKK  189 (283)
T ss_pred             -CcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-CCC---Ccc---chhhhccchHHHHHHHHh
Confidence             4777777662          4556678888999999999999996432 211   111   1122347888877544 4


Q ss_pred             hCCCeEEEecCeeecCCCCCC------cHHHHHHHHHcCC-----CcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCC
Q 015746          221 NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKR-----PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  289 (401)
Q Consensus       221 ~g~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~  289 (401)
                      ++.+-+++|||.+||.+.-..      .+...++++.+.-     .+++.|  .....++.++++|.+++.++++++-.+
T Consensus       190 ~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg--~l~~ppvnve~VA~aal~ai~dp~f~G  267 (283)
T KOG4288|consen  190 FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLG--PLLAPPVNVESVALAALKAIEDPDFKG  267 (283)
T ss_pred             cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccc--cccCCCcCHHHHHHHHHHhccCCCcCc
Confidence            588899999999999854332      1111233333322     134444  456789999999999999999998743


Q ss_pred             CcEEEecCCCCCCHHHHHHHHH
Q 015746          290 SNIFNLVSDRAVTLDGMAKLCA  311 (401)
Q Consensus       290 g~~~~~~~~~~~t~~el~~~i~  311 (401)
                                .++..|+.++-.
T Consensus       268 ----------vv~i~eI~~~a~  279 (283)
T KOG4288|consen  268 ----------VVTIEEIKKAAH  279 (283)
T ss_pred             ----------eeeHHHHHHHHH
Confidence                      356666655543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.30  E-value=4.3e-11  Score=110.24  Aligned_cols=191  Identities=13%  Similarity=0.092  Sum_probs=114.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~  146 (401)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.++...+..    .+.......+.++.+|     .+++.+
T Consensus        10 ~~~k~vlIt----G~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~d~~~~~~~~~~~   81 (247)
T PRK08945         10 LKDRIILVT----GAGDGIGREAALTYARHGATVILLGRTEEKLEAVYD----EIEAAGGPQPAIIPLDLLTATPQNYQQ   81 (247)
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH----HHHhcCCCCceEEEecccCCCHHHHHH
Confidence            457899999    999999999999999999999999998754332211    0111111234444444     333333


Q ss_pred             hhcC-----CcccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGG-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~-----~~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++.     .++|+|||+++.                     |+.++.++++++    ++.+.++||++||...+.....
T Consensus        82 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~  161 (247)
T PRK08945         82 LADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN  161 (247)
T ss_pred             HHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC
Confidence            3221     147999999973                     344544555544    5567779999999765422111


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                             ...+..+|.+.+.++...       ++.+++++|+.+-++....         ......      .   ..+.
T Consensus       162 -------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---------~~~~~~------~---~~~~  216 (247)
T PRK08945        162 -------WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---------AFPGED------P---QKLK  216 (247)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---------hcCccc------c---cCCC
Confidence                   011223455544443332       6788899998876542110         000000      0   1245


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEe
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNL  295 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~  295 (401)
                      ..+|+++++..++.+... ..|+++-.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~  243 (247)
T PRK08945        217 TPEDIMPLYLYLMGDDSRRKNGQSFDA  243 (247)
T ss_pred             CHHHHHHHHHHHhCccccccCCeEEeC
Confidence            789999999998876543 34566543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.29  E-value=9.3e-11  Score=107.37  Aligned_cols=192  Identities=14%  Similarity=0.189  Sum_probs=118.3

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHhhcC
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||||    ||+|+||.+++++|+++|++|+++.|..+. ...+       ..++.  ..++.++.+|   .+++.++++.
T Consensus         1 vlIt----Gas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   69 (239)
T TIGR01831         1 VLVT----GASRGIGRAIANRLAADGFEICVHYHSGRSDAESV-------VSAIQAQGGNARLLQFDVADRVACRTLLEA   69 (239)
T ss_pred             CEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-------HHHHHHcCCeEEEEEccCCCHHHHHHHHHH
Confidence            6899    999999999999999999999998875422 1111       01111  1246667777   5555554432


Q ss_pred             ----C-cccEEEeCCCC--------------------ChhhHHHHHHHH-----HhCCCCEEEEecccc-cccCCCCCCC
Q 015746          151 ----V-TFDVVLDNNGK--------------------NLDAVRPVADWA-----KSSGVKQFLFISSAG-IYKPADEPPH  199 (401)
Q Consensus       151 ----~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa-----~~~gv~~~v~~SS~~-vy~~~~~~~~  199 (401)
                          . ++|++||++|.                    |+.++.++++++     ++.+.++||++||.. .++.....  
T Consensus        70 ~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~--  147 (239)
T TIGR01831        70 DIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQV--  147 (239)
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCc--
Confidence                1 37999999883                    455666666654     223446899999965 44332111  


Q ss_pred             CCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                            .+..+|.+.+.+.+    +   .|++++.++||.+.++.... .... ........++.         .+...+
T Consensus       148 ------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~-~~~~~~~~~~~---------~~~~~~  210 (239)
T TIGR01831       148 ------NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEHD-LDEALKTVPMN---------RMGQPA  210 (239)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhHH-HHHHHhcCCCC---------CCCCHH
Confidence                  12235555433222    2   38999999999998774322 1111 22222222221         233679


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      |+++++..++.+... ..|.+..+.++
T Consensus       211 ~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       211 EVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHHHHHHHcCchhcCccCCEEEecCC
Confidence            999999999987544 45677777765

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.27  E-value=9.9e-11  Score=111.02  Aligned_cols=186  Identities=18%  Similarity=0.160  Sum_probs=113.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|.||.++++.|+++|++|++++|+.++...+..       ++. ...+..+.+|   .+++.++
T Consensus         7 l~gk~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~-------~l~~~~~~~~~~~Dv~d~~~v~~~   75 (296)
T PRK05872          7 LAGKVVVVT----GAARGIGAELARRLHARGAKLALVDLEEAELAALAA-------ELGGDDRVLTVVADVTDLAAMQAA   75 (296)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HhcCCCcEEEEEecCCCHHHHHHH
Confidence            346899999    999999999999999999999999998764432211       111 1123333355   5666555


Q ss_pred             hcC-----CcccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCC
Q 015746          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       148 ~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ++.     -++|+|||++|.                    |+.+..++++++...   +..+||++||...+....    
T Consensus        76 ~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----  151 (296)
T PRK05872         76 AEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP----  151 (296)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC----
Confidence            443     147999999994                    445555556555321   225899999987764321    


Q ss_pred             CCCCCCCCCCChHHHHH-----HHH-------HhCCCeEEEecCeeecCCCCCCcHH-HHHHHHHcCCCcccCCCCccee
Q 015746          200 VEGDVVKPDAGHVQVEK-----YIS-------ENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek-----~~~-------e~g~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                              ....|...|     +.+       ..|+.++++.||.+..+........ .....+....+.+       ..
T Consensus       152 --------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~  216 (296)
T PRK05872        152 --------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LR  216 (296)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------cc
Confidence                    113454444     222       2388999999999876532110000 1112222211111       12


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc
Q 015746          267 NIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      .++.++|++++++.++.+...
T Consensus       217 ~~~~~~~va~~i~~~~~~~~~  237 (296)
T PRK05872        217 RTTSVEKCAAAFVDGIERRAR  237 (296)
T ss_pred             CCCCHHHHHHHHHHHHhcCCC
Confidence            345899999999999987553

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.27  E-value=1.5e-10  Score=103.17  Aligned_cols=165  Identities=18%  Similarity=0.222  Sum_probs=108.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC-cc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-TF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~-~~  153 (401)
                      |++|||    ||+|.||.+++++|+++ ++|++++|+..                   .+.+...|.+++.++++.. ++
T Consensus         1 ~~vlIt----Gas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~i   56 (199)
T PRK07578          1 MKILVI----GASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKV   56 (199)
T ss_pred             CeEEEE----cCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCC
Confidence            589999    99999999999999999 99999998652                   1234444677788877754 58


Q ss_pred             cEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCCCCCCCCCCh
Q 015746          154 DVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       154 d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~  211 (401)
                      |+|||++|.                    |+.++.++++++...  +..+|+++||.......            +....
T Consensus        57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~------------~~~~~  124 (199)
T PRK07578         57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI------------PGGAS  124 (199)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC------------CCchH
Confidence            999999983                    345556677665442  22479999986543211            11133


Q ss_pred             HHHHH-----HH----HH--hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHH
Q 015746          212 VQVEK-----YI----SE--NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (401)
Q Consensus       212 ~~~ek-----~~----~e--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~  280 (401)
                      |.+.|     +.    .|  .|+++..|+||.+-.+..          ..  +..  +.+     ..++.++|+|+.+..
T Consensus       125 Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~----------~~--~~~--~~~-----~~~~~~~~~a~~~~~  185 (199)
T PRK07578        125 AATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE----------KY--GPF--FPG-----FEPVPAARVALAYVR  185 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh----------hh--hhc--CCC-----CCCCCHHHHHHHHHH
Confidence            44333     22    22  378899999998743311          00  000  111     235789999999999


Q ss_pred             HhcCCCcCCCcEEEec
Q 015746          281 AVENPEAASSNIFNLV  296 (401)
Q Consensus       281 ~~~~~~~~~g~~~~~~  296 (401)
                      +++....  |++|+++
T Consensus       186 ~~~~~~~--g~~~~~~  199 (199)
T PRK07578        186 SVEGAQT--GEVYKVG  199 (199)
T ss_pred             Hhcccee--eEEeccC
Confidence            9986533  6788753

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.27  E-value=4e-11  Score=115.09  Aligned_cols=110  Identities=18%  Similarity=0.212  Sum_probs=74.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+|+||.+++++|+++|++|++++|+.++...+...    +. .....+.++.+|   .+++.++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~v~~~~~   75 (322)
T PRK07453          5 AKGTVIIT----GASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQE----LG-IPPDSYTIIHIDLGDLDSVRRFVD   75 (322)
T ss_pred             CCCEEEEE----cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----hh-ccCCceEEEEecCCCHHHHHHHHH
Confidence            46889999    9999999999999999999999999987544321110    00 011245666666   555555554


Q ss_pred             C-----CcccEEEeCCCC---------------------ChhhHHHHHHHH----HhCC--CCEEEEecccccc
Q 015746          150 G-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG--VKQFLFISSAGIY  191 (401)
Q Consensus       150 ~-----~~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~g--v~~~v~~SS~~vy  191 (401)
                      .     .++|+|||+||.                     |+.++.++++++    ++.+  ..|+|++||...+
T Consensus        76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~  149 (322)
T PRK07453         76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTAN  149 (322)
T ss_pred             HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccC
Confidence            3     148999999983                     233444444444    3343  3589999997764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.26  E-value=8.4e-11  Score=109.40  Aligned_cols=199  Identities=14%  Similarity=0.196  Sum_probs=117.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++++||    ||+|+||++++++|+++|++|++++|+.+..+.+..        .....+..+.+|   .+++.++++
T Consensus         4 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~~~~~~~~~~~   71 (262)
T TIGR03325         4 KGEVVLVT----GGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA--------AHGDAVVGVEGDVRSLDDHKEAVA   71 (262)
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCceEEEEeccCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998754433211        011235555665   444555444


Q ss_pred             CC-----cccEEEeCCCC-------------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCC
Q 015746          150 GV-----TFDVVLDNNGK-------------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~  195 (401)
                      ..     ++|++||++|.                         |+.++..+++++..    .+ .++|++||...+.+..
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~  150 (262)
T TIGR03325        72 RCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNG  150 (262)
T ss_pred             HHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCC
Confidence            31     47999999973                         23334455555543    23 4688888765442211


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH----h--CCCeEEEecCeeecCCCCCCcH---H----HH-HHHHHcCCCcccCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKDCE---E----WF-FDRIVRKRPVPIPGS  261 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e----~--g~~~~ilRp~~v~G~~~~~~~~---~----~~-~~~~~~~~~~~~~~~  261 (401)
                      .       ...+..+|.+.+.+.+.    .  .+++..|.||.+..+.......   .    .+ ........ .+    
T Consensus       151 ~-------~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p----  218 (262)
T TIGR03325       151 G-------GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV-LP----  218 (262)
T ss_pred             C-------CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc-CC----
Confidence            1       01122355554443322    2  3778899999987653211000   0    00 11111111 11    


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCC--cCCCcEEEecCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDR  299 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~--~~~g~~~~~~~~~  299 (401)
                         ...+...+|+|++++.++.+..  ...|+++.+.++.
T Consensus       219 ---~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       219 ---IGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             ---CCCCCChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence               1124478999999998887643  2457888888763

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.25  E-value=3e-10  Score=105.31  Aligned_cols=203  Identities=12%  Similarity=0.089  Sum_probs=116.6

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccC---CCCCCCcc-cchh--cCCCeEEEcC---
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKM---KKPPFNRF-NEIV--SAGGKTVWGD---  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~~~~~~~-~~l~--~~~~~~~~~D---  140 (401)
                      .++++||||    ||+|  .||++++++|+++|++|+++.|........   .......+ .++.  ...+.++.+|   
T Consensus         4 l~~k~vlVt----Gas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~   79 (256)
T PRK12859          4 LKNKVAVVT----GVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ   79 (256)
T ss_pred             cCCcEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            346899999    9995  899999999999999998876542111000   00000000 1111  1245566676   


Q ss_pred             HhhHHHhhcCC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccc
Q 015746          141 PAEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIY  191 (401)
Q Consensus       141 ~~~~~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy  191 (401)
                      .+++.+++...     .+|+|||+++.                    |+.+.    +.++..+++.+-.+||++||...+
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  159 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence            55555554322     37999999983                    33333    344555555444689999997654


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                      .....       ...+..+|.+.+.+.+.       .+++++.|+||.+..+....    .+...+....+.        
T Consensus       160 ~~~~~-------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~~--------  220 (256)
T PRK12859        160 GPMVG-------ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFPF--------  220 (256)
T ss_pred             CCCCC-------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCCC--------
Confidence            22110       01112244443333222       37899999999986653211    111222222221        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSD  298 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~  298 (401)
                       ..+...+|+|+++..++.... ..+|+++.+.++
T Consensus       221 -~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        221 -GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             -CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence             123468999999999887654 345788888765

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.1e-10  Score=112.30  Aligned_cols=179  Identities=20%  Similarity=0.190  Sum_probs=113.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .+++||||    ||+|.||++++++|+++|++|++++|+.++.+.+.       .++.  ...+.++.+|   .+++.++
T Consensus         6 ~~k~vlIT----GAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~-------~~~~~~g~~~~~~~~Dv~d~~~v~~~   74 (330)
T PRK06139          6 HGAVVVIT----GASSGIGQATAEAFARRGARLVLAARDEEALQAVA-------EECRALGAEVLVVPTDVTDADQVKAL   74 (330)
T ss_pred             CCCEEEEc----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence            45799999    99999999999999999999999999876543221       1111  1234445555   5666665


Q ss_pred             hcC-----CcccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++.     -++|++||++|.                    |+.++.++.+    ..++.+..+||++||...+....   
T Consensus        75 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p---  151 (330)
T PRK06139         75 ATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP---  151 (330)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC---
Confidence            532     247999999983                    3444444444    34555556899999977654321   


Q ss_pred             CCCCCCCCCCCChHHHHHH---------HHH---h-CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKY---------ISE---N-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~---------~~e---~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               ....|...|.         ..|   . ++.++.+.||.+.++.....      .... +...      ...
T Consensus       152 ---------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~------~~~~-~~~~------~~~  209 (330)
T PRK06139        152 ---------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG------ANYT-GRRL------TPP  209 (330)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc------cccc-cccc------cCC
Confidence                     1134444443         222   1 68899999999988743211      0000 1100      011


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ..+++++|+|++++.+++++..
T Consensus       210 ~~~~~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        210 PPVYDPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CCCCCHHHHHHHHHHHHhCCCC
Confidence            2356899999999999987654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.25  E-value=2.3e-10  Score=109.11  Aligned_cols=210  Identities=15%  Similarity=0.131  Sum_probs=122.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      .+++++|||    ||+|+||++++++|+++|++|++.++.... ....       ..++.  ...+.++.+|   .+++.
T Consensus        10 l~~k~~lVT----Gas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~-------~~~i~~~g~~~~~~~~Dv~d~~~~~   78 (306)
T PRK07792         10 LSGKVAVVT----GAAAGLGRAEALGLARLGATVVVNDVASALDASDV-------LDEIRAAGAKAVAVAGDISQRATAD   78 (306)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHH-------HHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            456899999    999999999999999999999998875422 1111       01111  1245566666   55555


Q ss_pred             HhhcC----CcccEEEeCCCC--------------------ChhhHHHHHHHHHh----C----C---CCEEEEeccccc
Q 015746          146 NVVGG----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----S----G---VKQFLFISSAGI  190 (401)
Q Consensus       146 ~~~~~----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~----g---v~~~v~~SS~~v  190 (401)
                      ++++.    -++|+|||++|.                    |+.++.++++++..    .    +   ..++|++||...
T Consensus        79 ~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         79 ELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            55432    147999999984                    34566666665431    1    1   248999998765


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                      +.....       ...+..+|.+++.+.+.       +|+++..|.|+.  ..    .+.    ..+....+. ...   
T Consensus       159 ~~~~~~-------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t----~~~----~~~~~~~~~-~~~---  217 (306)
T PRK07792        159 LVGPVG-------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RT----AMT----ADVFGDAPD-VEA---  217 (306)
T ss_pred             ccCCCC-------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CC----chh----hhhccccch-hhh---
Confidence            432211       01122344444433322       378888888863  11    111    111111000 000   


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC------------------CCCCHHHHHHHHHHH
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD------------------RAVTLDGMAKLCAQA  313 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~------------------~~~t~~el~~~i~~~  313 (401)
                      ....++.++|++.++..++..... .+|++|.+.++                  .+++..|+.+.+.+.
T Consensus       218 ~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (306)
T PRK07792        218 GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDY  286 (306)
T ss_pred             hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence            112345899999999888876543 45677777653                  346666777777666

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.25  E-value=5.2e-10  Score=101.40  Aligned_cols=178  Identities=14%  Similarity=0.128  Sum_probs=114.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh--
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV--  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~--  148 (401)
                      |++++||    ||+|+||++++++|+++|++|++++|+.++...+           ...+++++.+|   .+++.+++  
T Consensus         1 ~~~vlvt----G~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~v~~~~~~   65 (222)
T PRK06953          1 MKTVLIV----GASRGIGREFVRQYRADGWRVIATARDAAALAAL-----------QALGAEALALDVADPASVAGLAWK   65 (222)
T ss_pred             CceEEEE----cCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-----------HhccceEEEecCCCHHHHHHHHHH
Confidence            5789999    9999999999999999999999999987544322           11244566666   55555543  


Q ss_pred             -cCCcccEEEeCCCC----------------------ChhhHHHHHHHHHhC---CCCEEEEecccc-cccCCCCCCCCC
Q 015746          149 -GGVTFDVVLDNNGK----------------------NLDAVRPVADWAKSS---GVKQFLFISSAG-IYKPADEPPHVE  201 (401)
Q Consensus       149 -~~~~~d~Vv~~a~~----------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~-vy~~~~~~~~~E  201 (401)
                       .+.++|+|||+++.                      |+.++.++++++...   +-.++|++||.. .++.....+   
T Consensus        66 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~---  142 (222)
T PRK06953         66 LDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTT---  142 (222)
T ss_pred             hcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCC---
Confidence             33358999999873                      345666777766541   224789998854 454321110   


Q ss_pred             CCCCCCCCChHHHHHHHHHh-----CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHH
Q 015746          202 GDVVKPDAGHVQVEKYISEN-----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e~-----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~  276 (401)
                        ...+..+|.+.+.+++..     +++++.++||++..+...                     +    ..++..+|.++
T Consensus       143 --~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~  195 (222)
T PRK06953        143 --GWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVA  195 (222)
T ss_pred             --ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHH
Confidence              012334666666555543     677899999998766311                     0    01246788888


Q ss_pred             HHHHHhcCCCc-CCCcEEEec
Q 015746          277 MLTLAVENPEA-ASSNIFNLV  296 (401)
Q Consensus       277 ~~~~~~~~~~~-~~g~~~~~~  296 (401)
                      .++.++..... ..+..|...
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~  216 (222)
T PRK06953        196 GMRRVIAQATRRDNGRFFQYD  216 (222)
T ss_pred             HHHHHHHhcCcccCceEEeeC
Confidence            88887765543 334555544

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.24  E-value=1.7e-10  Score=107.38  Aligned_cols=176  Identities=18%  Similarity=0.186  Sum_probs=109.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....+..       ++ ....+.++.+|   .+++..++
T Consensus         4 ~~~~vlIt----G~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~   72 (263)
T PRK09072          4 KDKRVLLT----GASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA-------RLPYPGRHRWVVADLTSEAGREAVL   72 (263)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HHhcCCceEEEEccCCCHHHHHHHH
Confidence            35789999    999999999999999999999999998754332111       11 01245666666   55555444


Q ss_pred             cC----CcccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCC
Q 015746          149 GG----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +.    -++|+|||++|.                    |+.++.++++++.    +.+..++|++||...+....     
T Consensus        73 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----  147 (263)
T PRK09072         73 ARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP-----  147 (263)
T ss_pred             HHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-----
Confidence            32    247999999984                    3455556666554    34446799998865432211     


Q ss_pred             CCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|...|..         .+   .++.++.+.||.+..+....     ..... . ..   .+     ..+
T Consensus       148 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~-----~~~~~-~-~~---~~-----~~~  205 (263)
T PRK09072        148 -------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE-----AVQAL-N-RA---LG-----NAM  205 (263)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh-----hcccc-c-cc---cc-----CCC
Confidence                   11334444432         22   37889999999886552110     00000 0 00   01     134


Q ss_pred             eeHHHHHHHHHHHhcCCC
Q 015746          269 AHVRDLSSMLTLAVENPE  286 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~  286 (401)
                      ..++|+|+.++.++++..
T Consensus       206 ~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        206 DDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             CCHHHHHHHHHHHHhCCC
Confidence            578999999999999764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.23  E-value=1.3e-10  Score=106.27  Aligned_cols=194  Identities=17%  Similarity=0.213  Sum_probs=115.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++++||||    ||+|+||+++++.|+++|++|++++|+.++...+.       ..+. ..+++++.+|   .+.+.+++
T Consensus         4 ~~~~vlIt----Ga~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~   72 (238)
T PRK05786          4 KGKKVAII----GVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMK-------KTLSKYGNIHYVVGDVSSTESARNVI   72 (238)
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEECCCCCHHHHHHHH
Confidence            35799999    99999999999999999999999999875432210       1111 1245667776   55555544


Q ss_pred             cCC-----cccEEEeCCCC------------------ChhhHHHHHHHHHhC--CCCEEEEeccccc-ccCCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK------------------NLDAVRPVADWAKSS--GVKQFLFISSAGI-YKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~v-y~~~~~~~~~E~  202 (401)
                      +..     ++|.+||+++.                  |+.+...+++.+...  .-.+||++||... ++...       
T Consensus        73 ~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-------  145 (238)
T PRK05786         73 EKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP-------  145 (238)
T ss_pred             HHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC-------
Confidence            332     36999999873                  122323333333221  1147999998654 22110       


Q ss_pred             CCCCCCCChHHHHHHH----HH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          203 DVVKPDAGHVQVEKYI----SE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~----~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                      ....+..+|.+.+.++    .+   .+++++++||++++++.....    ....      ....+     ..++..+|++
T Consensus       146 ~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~~------~~~~~-----~~~~~~~~va  210 (238)
T PRK05786        146 DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NWKK------LRKLG-----DDMAPPEDFA  210 (238)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hhhh------hcccc-----CCCCCHHHHH
Confidence            0011222444433322    22   389999999999998743210    0111      00001     1245789999


Q ss_pred             HHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          276 SMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       276 ~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ++++.++.++.. ..|+.+.+.++.
T Consensus       211 ~~~~~~~~~~~~~~~g~~~~~~~~~  235 (238)
T PRK05786        211 KVIIWLLTDEADWVDGVVIPVDGGA  235 (238)
T ss_pred             HHHHHHhcccccCccCCEEEECCcc
Confidence            999999976554 346788776543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.23  E-value=2.3e-10  Score=104.87  Aligned_cols=190  Identities=14%  Similarity=0.060  Sum_probs=112.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~  146 (401)
                      +.+++|+||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.......+.++..|     .+++.+
T Consensus         4 l~~k~vlIt----G~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~D~~~~~~~~~~~   75 (239)
T PRK08703          4 LSDKTILVT----GASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD----AIVEAGHPEPFAIRFDLMSAEEKEFEQ   75 (239)
T ss_pred             CCCCEEEEE----CCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH----HHHHcCCCCcceEEeeecccchHHHHH
Confidence            345899999    999999999999999999999999998854332110    0000001123334444     223333


Q ss_pred             hh----cC--CcccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCC
Q 015746          147 VV----GG--VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~----~~--~~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~  195 (401)
                      ++    ..  .++|+|||++|.                     |+.+..++++++    ++.+..++|++||.....+. 
T Consensus        76 ~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-  154 (239)
T PRK08703         76 FAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK-  154 (239)
T ss_pred             HHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC-
Confidence            22    11  147999999983                     344444444444    44455689999985533211 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH----h----CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE----N----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e----~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                        +    ....+..+|.+.+.+++.    .    ++++++|+||.++++.....         ..+.         ....
T Consensus       155 --~----~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---------~~~~---------~~~~  210 (239)
T PRK08703        155 --A----YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---------HPGE---------AKSE  210 (239)
T ss_pred             --C----CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---------CCCC---------Cccc
Confidence              0    111233466665554433    2    48899999999998843210         0111         1112


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEE
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFN  294 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~  294 (401)
                      +...+|++..+..++..... ..|++..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~  238 (239)
T PRK08703        211 RKSYGDVLPAFVWWASAESKGRSGEIVY  238 (239)
T ss_pred             cCCHHHHHHHHHHHhCccccCcCCeEee
Confidence            45889999999999975433 4456653

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.3e-10  Score=108.98  Aligned_cols=196  Identities=14%  Similarity=0.137  Sum_probs=116.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .++++|||    ||+|+||++++++|+++|++|++++|+.+....+.........++.  ...+.++.+|   .+++.++
T Consensus         5 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          5 SGKTLFIT----GASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            45789999    9999999999999999999999999987543221100000000111  1245666677   5666665


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||++|.                    |+.++.++++++..    .+-.++|++||........   
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---  157 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKW---  157 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccc---
Confidence            5532     58999999983                    45667777776653    3334799999854221110   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                      .  .....+..+|++++.+++.       .++.++.|.|+.++...        +...+..+..        ....+..+
T Consensus       158 ~--~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~--------~~~~~~~~~~--------~~~~~~~p  219 (273)
T PRK08278        158 F--APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA--------AVRNLLGGDE--------AMRRSRTP  219 (273)
T ss_pred             c--CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH--------HHHhcccccc--------cccccCCH
Confidence            0  0011223456666555443       27888999998432211        1111111111        11235688


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEE
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIF  293 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~  293 (401)
                      +|+|+.++.++..... .+|+++
T Consensus       220 ~~va~~~~~l~~~~~~~~~G~~~  242 (273)
T PRK08278        220 EIMADAAYEILSRPAREFTGNFL  242 (273)
T ss_pred             HHHHHHHHHHhcCccccceeEEE
Confidence            9999999999987653 344544

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.22  E-value=3.4e-10  Score=106.16  Aligned_cols=204  Identities=12%  Similarity=0.096  Sum_probs=117.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++.++||    |+ |+||++++++|. +|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.+++
T Consensus         2 ~k~~lIt----Ga-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~i~~~~   68 (275)
T PRK06940          2 KEVVVVI----GA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-------KTLREAGFDVSTQEVDVSSRESVKALA   68 (275)
T ss_pred             CCEEEEE----CC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEEeecCCHHHHHHHH
Confidence            4678999    87 789999999996 8999999999765433211       1111  1234556666   55666555


Q ss_pred             cC----CcccEEEeCCCC-------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCC-C----C---CCCC
Q 015746          149 GG----VTFDVVLDNNGK-------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD-E----P---PHVE  201 (401)
Q Consensus       149 ~~----~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~-~----~---~~~E  201 (401)
                      +.    -++|+|||+||.             |+.++.++++++...  .-.++|++||........ .    .   .+..
T Consensus        69 ~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         69 ATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             HHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccc
Confidence            42    248999999994             566677777766542  113467777755432110 0    0   0000


Q ss_pred             CC--------C--CCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCC---cHHHHHHHHHcCCCc
Q 015746          202 GD--------V--VKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPV  256 (401)
Q Consensus       202 ~~--------~--~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~  256 (401)
                      .+        +  ..+....|.+.|...         +   .|++++.|.||.+..+.....   ........+....++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  228 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA  228 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc
Confidence            00        0  001123455555331         2   378999999999977632110   001112222222221


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                               ..+...+|+|+++..++.+... .+|+++.+.++.
T Consensus       229 ---------~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        229 ---------GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             ---------ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence                     1245789999999998875443 567888888764

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.20  E-value=2.3e-10  Score=103.91  Aligned_cols=178  Identities=11%  Similarity=0.177  Sum_probs=111.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+++||    ||+|.||++++++|+++|++|++++|+.++...+..          ..+++++.+|   .+++.++++..
T Consensus         1 m~vlIt----Gas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~   66 (223)
T PRK05884          1 VEVLVT----GGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLF   66 (223)
T ss_pred             CeEEEE----eCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHH
Confidence            579999    999999999999999999999999998754432111          0134556666   66666666532


Q ss_pred             --cccEEEeCCCC-------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCC
Q 015746          152 --TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       152 --~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                        ++|++||+++.                         |+.+..++++++...  .-.++|++||...   ..       
T Consensus        67 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---~~-------  136 (223)
T PRK05884         67 PHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---PA-------  136 (223)
T ss_pred             hhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---CC-------
Confidence              47999999762                         222333344433221  1248999998641   00       


Q ss_pred             CCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                       ...+..+|.+...+.+.       .|+++..|.||.+..+.         .+.. ...+            .-.++|++
T Consensus       137 -~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~---------~~~~-~~~p------------~~~~~~ia  193 (223)
T PRK05884        137 -GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG---------YDGL-SRTP------------PPVAAEIA  193 (223)
T ss_pred             -ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh---------hhhc-cCCC------------CCCHHHHH
Confidence             01122344443333322       37899999999985441         1111 0011            11689999


Q ss_pred             HHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          276 SMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       276 ~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +++..++..... .+|+++.+.++.
T Consensus       194 ~~~~~l~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        194 RLALFLTTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             HHHHHHcCchhhccCCcEEEeCCCe
Confidence            999998876543 567888887765

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.20  E-value=2.2e-10  Score=107.22  Aligned_cols=186  Identities=15%  Similarity=0.060  Sum_probs=106.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+++||    ||+|.||.+++++|+++|++|++++|+.+.......    .+.......+.++.+|   ++++.++++..
T Consensus         1 k~vlIt----Gas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (272)
T PRK07832          1 KRCFVT----GAASGIGRATALRLAAQGAELFLTDRDADGLAQTVA----DARALGGTVPEHRALDISDYDAVAAFAADI   72 (272)
T ss_pred             CEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhcCCCcceEEEeeCCCHHHHHHHHHHH
Confidence            579999    999999999999999999999999987654322110    0011111112334445   55555444331


Q ss_pred             -----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hC-CCCEEEEecccccccCCCCCCCCC
Q 015746          152 -----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SS-GVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       152 -----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~-gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                           ++|+|||++|.                    |+.+..++++++.    +. ...+||++||...+.....     
T Consensus        73 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~-----  147 (272)
T PRK07832         73 HAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW-----  147 (272)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC-----
Confidence                 37999999983                    3455556666543    22 2358999999764322110     


Q ss_pred             CCCCCCCCChHHHHHHH-------HHhCCCeEEEecCeeecCCCCCCc------HHHHHHHHHcCCCcccCCCCcceeee
Q 015746          202 GDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDC------EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~-------~e~g~~~~ilRp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                        ...+..+|.+.+.+.       ...++++++++||.+.++......      ...........    .      ....
T Consensus       148 --~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~  215 (272)
T PRK07832        148 --HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR----F------RGHA  215 (272)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh----c------ccCC
Confidence              011122343322222       224899999999999877421100      00000010000    0      1124


Q ss_pred             eeHHHHHHHHHHHhcCC
Q 015746          269 AHVRDLSSMLTLAVENP  285 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~  285 (401)
                      +..+|+|+.++.++++.
T Consensus       216 ~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        216 VTPEKAAEKILAGVEKN  232 (272)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            68999999999999643

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.17  E-value=1.5e-09  Score=101.58  Aligned_cols=200  Identities=16%  Similarity=0.179  Sum_probs=114.9

Q ss_pred             ccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      +++.+|||    ||++  .||+.++++|+++|++|++..|+....+.+...    ...+  .....+.+|   .+++.++
T Consensus         6 ~~k~~lVT----Gas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~----~~~~--g~~~~~~~Dv~d~~~v~~~   75 (271)
T PRK06505          6 QGKRGLIM----GVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPL----AESL--GSDFVLPCDVEDIASVDAV   75 (271)
T ss_pred             CCCEEEEe----CCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHH----HHhc--CCceEEeCCCCCHHHHHHH
Confidence            45789999    9997  999999999999999999988864322111100    0001  112344555   5555555


Q ss_pred             hcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHh---CCCCEEEEecccccccCCC
Q 015746          148 VGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~---~gv~~~v~~SS~~vy~~~~  195 (401)
                      ++..     ++|++||+||.                        |+.+..++++++..   .+ .++|++||....... 
T Consensus        76 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~-G~Iv~isS~~~~~~~-  153 (271)
T PRK06505         76 FEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG-GSMLTLTYGGSTRVM-  153 (271)
T ss_pred             HHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC-ceEEEEcCCCccccC-
Confidence            4332     48999999983                        22233333333321   12 479999987543211 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                        |    ....+..+|.+...+.+    |   .|+++..|.||.+..+.... .-............|+.         .
T Consensus       154 --~----~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~---------r  218 (271)
T PRK06505        154 --P----NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLR---------R  218 (271)
T ss_pred             --C----ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCcc---------c
Confidence              0    01112235555433222    2   37999999999987653211 00001111122222211         2


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..++|+|++++.++..... .+|+++.+.++.
T Consensus       219 ~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        219 TVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             cCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence            34689999999999876543 457899888774

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.3e-09  Score=104.20  Aligned_cols=155  Identities=14%  Similarity=0.019  Sum_probs=93.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++++||    ||+|+||.+++++|+++|++|++++|+.++..+...    .+... ....+.++.+|   .+++.++
T Consensus        12 l~gk~~lIT----Gas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~----~l~~~~~~~~v~~~~~Dl~d~~sv~~~   83 (313)
T PRK05854         12 LSGKRAVVT----GASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVA----AIRTAVPDAKLSLRALDLSSLASVAAL   83 (313)
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhCCCCceEEEEecCCCHHHHHHH
Confidence            456899999    999999999999999999999999998765432111    00000 01245666777   5555554


Q ss_pred             hcC-----CcccEEEeCCCC-------------------ChhhHH----HHHHHHHhCCCCEEEEecccccccC-CCCCC
Q 015746          148 VGG-----VTFDVVLDNNGK-------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKP-ADEPP  198 (401)
Q Consensus       148 ~~~-----~~~d~Vv~~a~~-------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~vy~~-~~~~~  198 (401)
                      ++.     -++|++||+||.                   |+.+..    .++..+++. ..++|++||...+.. ....+
T Consensus        84 ~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~  162 (313)
T PRK05854         84 GEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDD  162 (313)
T ss_pred             HHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccc
Confidence            433     147999999983                   333433    334444443 348999998765432 11122


Q ss_pred             CCCCCCCCCCCChHHHHHHH-----HH---------hCCCeEEEecCeeecC
Q 015746          199 HVEGDVVKPDAGHVQVEKYI-----SE---------NFSNWASFRPQYMIGS  236 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~-----~e---------~g~~~~ilRp~~v~G~  236 (401)
                      +.+..... ....|+..|..     .+         .|+.+..+.||.+...
T Consensus       163 ~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        163 LNWERSYA-GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             ccccccCc-chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            22222111 12345555422     21         2588999999998665

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.17  E-value=2.8e-10  Score=119.79  Aligned_cols=179  Identities=15%  Similarity=0.142  Sum_probs=113.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..++++|||    ||+|+||++++++|+++|++|++++|+.+....+..    .+.. ....+.++.+|   .+++.+++
T Consensus       369 ~~~k~vlIt----Gas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~~~~~~~~~~  439 (657)
T PRK07201        369 LVGKVVLIT----GASSGIGRATAIKVAEAGATVFLVARNGEALDELVA----EIRA-KGGTAHAYTCDLTDSAAVDHTV  439 (657)
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHh-cCCcEEEEEecCCCHHHHHHHH
Confidence            446899999    999999999999999999999999998755432111    0000 01245666666   56666655


Q ss_pred             cCC-----cccEEEeCCCC----------------------ChhhHH----HHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK----------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~----------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +..     ++|+|||++|.                      |+.++.    .++..+++.+..+||++||.+.|......
T Consensus       440 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  519 (657)
T PRK07201        440 KDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRF  519 (657)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCc
Confidence            532     47999999984                      122222    33444556677799999999887543210


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                             ..+..+|.+.+.+...       .++++++|+||.+..+.....            .   .+.    ....+.
T Consensus       520 -------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~---~~~----~~~~~~  573 (657)
T PRK07201        520 -------SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------K---RYN----NVPTIS  573 (657)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------c---ccc----CCCCCC
Confidence                   0011234333333222       389999999999977632210            0   001    012457


Q ss_pred             HHHHHHHHHHHhcCC
Q 015746          271 VRDLSSMLTLAVENP  285 (401)
Q Consensus       271 v~D~a~~~~~~~~~~  285 (401)
                      .+++|+.++..+.+.
T Consensus       574 ~~~~a~~i~~~~~~~  588 (657)
T PRK07201        574 PEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999988654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.16  E-value=1e-09  Score=101.94  Aligned_cols=203  Identities=10%  Similarity=0.075  Sum_probs=114.5

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .+|.++||    ||+  +.||++++++|+++|++|++..|+....+.+.+.    ..++...++.++.+|   .+++.++
T Consensus         6 ~~k~~lIt----Ga~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~d~~~v~~~   77 (257)
T PRK08594          6 EGKTYVVM----GVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVREL----ADTLEGQESLLLPCDVTSDEEITAC   77 (257)
T ss_pred             CCCEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHH----HHHcCCCceEEEecCCCCHHHHHHH
Confidence            46899999    997  8999999999999999999988754221111100    011111245566666   5555554


Q ss_pred             hcC----C-cccEEEeCCCCC------------------------hhhHHHHHHHHHhC--CCCEEEEecccccccCCCC
Q 015746          148 VGG----V-TFDVVLDNNGKN------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       148 ~~~----~-~~d~Vv~~a~~~------------------------~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++.    . ++|++||++|..                        +.+...+++++...  .-.++|++||........ 
T Consensus        78 ~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-  156 (257)
T PRK08594         78 FETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQ-  156 (257)
T ss_pred             HHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCC-
Confidence            432    1 489999998731                        12222233333221  114899999966432110 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                            ....+..+|.+.+.+.+.       .|+++..|.||.+..+..... ........+....+.         ..+
T Consensus       157 ------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~  221 (257)
T PRK08594        157 ------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPL---------RRT  221 (257)
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCc---------ccc
Confidence                  001122345554433322       379999999999876521100 000111111111111         124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..++|+|++++.++..... ..|+++.+.++.
T Consensus       222 ~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        222 TTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             CCHHHHHHHHHHHcCcccccccceEEEECCch
Confidence            5789999999999876543 557888887763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.15  E-value=1.7e-09  Score=100.70  Aligned_cols=198  Identities=12%  Similarity=0.145  Sum_probs=115.7

Q ss_pred             ccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~  145 (401)
                      +++.+|||    ||  ++.||++++++|+++|++|++..|.....+.+        .++..  .....+.+|   .+++.
T Consensus         5 ~~k~~lIT----Ga~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~Dv~~~~~v~   72 (261)
T PRK08690          5 QGKKILIT----GMISERSIAYGIAKACREQGAELAFTYVVDKLEERV--------RKMAAELDSELVFRCDVASDDEIN   72 (261)
T ss_pred             CCcEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHH--------HHHHhccCCceEEECCCCCHHHHH
Confidence            45789999    97  67999999999999999999887653211111        11110  123455666   66666


Q ss_pred             HhhcCC-----cccEEEeCCCCC-------------------------hhhHHHHHHH----HHhCCCCEEEEecccccc
Q 015746          146 NVVGGV-----TFDVVLDNNGKN-------------------------LDAVRPVADW----AKSSGVKQFLFISSAGIY  191 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~~-------------------------~~~~~~ll~a----a~~~gv~~~v~~SS~~vy  191 (401)
                      ++++..     ++|++||+||..                         +.+...+.++    .++.+ .++|++||.+.+
T Consensus        73 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~  151 (261)
T PRK08690         73 QVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAV  151 (261)
T ss_pred             HHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccc
Confidence            555332     489999999842                         1111122222    22222 479999987654


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHH-------HhCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCc
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~-------e~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                      ....       ....+..+|.+.+.+.+       ..|++++.|.||.+-.+..... ......+.+....|+       
T Consensus       152 ~~~~-------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-------  217 (261)
T PRK08690        152 RAIP-------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL-------  217 (261)
T ss_pred             cCCC-------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC-------
Confidence            2211       01112335655544332       2489999999999876521110 001112222222222       


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        ..+..++|+|+++..++.+... ..|+++.+.++.
T Consensus       218 --~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        218 --RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             --CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence              1245789999999999986543 557889888774

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.15  E-value=1.8e-09  Score=100.26  Aligned_cols=200  Identities=11%  Similarity=0.119  Sum_probs=114.2

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~  145 (401)
                      +++.++||    ||+  +.||+.++++|+++|++|++..|+.+.....     ....++..  ..+.++.+|   ++++.
T Consensus         5 ~~k~~lIt----Gas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~d~~~v~   75 (258)
T PRK07370          5 TGKKALVT----GIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFE-----KKVRELTEPLNPSLFLPCDVQDDAQIE   75 (258)
T ss_pred             CCcEEEEe----CCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHH-----HHHHHHHhccCcceEeecCcCCHHHHH
Confidence            45789999    986  7999999999999999998887654321100     01111111  123455555   56665


Q ss_pred             HhhcCC-----cccEEEeCCCC------------------------ChhhHHH----HHHHHHhCCCCEEEEeccccccc
Q 015746          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~----ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      ++++..     ++|++||++|.                        |+.+...    ++..+++.  .++|++||.....
T Consensus        76 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g~Iv~isS~~~~~  153 (258)
T PRK07370         76 ETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--GSIVTLTYLGGVR  153 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--CeEEEEecccccc
Confidence            555432     48999999983                        2233333    33334332  4899999965432


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcc
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                      ...       ....+..+|.+.+.+.+.       .|++++.|.||.+..+.... .......+.+....++        
T Consensus       154 ~~~-------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------  218 (258)
T PRK07370        154 AIP-------NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL--------  218 (258)
T ss_pred             CCc-------ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc--------
Confidence            110       001122244443332222       27899999999987652110 0001111222211121        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       ..+...+|++.++..++.+... ..|+++.+.++.
T Consensus       219 -~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        219 -RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             -CcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence             1245789999999999886543 557888887764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.15  E-value=8.2e-10  Score=103.04  Aligned_cols=201  Identities=13%  Similarity=0.112  Sum_probs=113.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---Hh----hHHH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PA----EVGN  146 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~----~~~~  146 (401)
                      +.++||    ||+|+||++++++|+++|++|+++.|.. ++...+..    .+.......+.++.+|   .+    .+.+
T Consensus         2 ~~~lIT----Gas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~   73 (267)
T TIGR02685         2 PAAVVT----GAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAA----ELNARRPNSAVTCQADLSNSATLFSRCEA   73 (267)
T ss_pred             CEEEEe----CCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH----HHHhccCCceEEEEccCCCchhhHHHHHH
Confidence            469999    9999999999999999999999987653 22211100    0000011134455666   33    2233


Q ss_pred             hhc----CC-cccEEEeCCCC-------------------------------ChhhHHHHHHHHH----hC------CCC
Q 015746          147 VVG----GV-TFDVVLDNNGK-------------------------------NLDAVRPVADWAK----SS------GVK  180 (401)
Q Consensus       147 ~~~----~~-~~d~Vv~~a~~-------------------------------~~~~~~~ll~aa~----~~------gv~  180 (401)
                      +++    .. ++|+|||+||.                               |+.+...+++++.    ..      +..
T Consensus        74 ~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~  153 (267)
T TIGR02685        74 IIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNL  153 (267)
T ss_pred             HHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCe
Confidence            332    22 48999999983                               1112334444332    11      123


Q ss_pred             EEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC
Q 015746          181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK  253 (401)
Q Consensus       181 ~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  253 (401)
                      ++|++||.....+.     .  ....+..+|.+++.+.+.       .|++++.|+||.+..+....   ..........
T Consensus       154 ~iv~~~s~~~~~~~-----~--~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~~~~~~~~~  223 (267)
T TIGR02685       154 SIVNLCDAMTDQPL-----L--GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FEVQEDYRRK  223 (267)
T ss_pred             EEEEehhhhccCCC-----c--ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---hhHHHHHHHh
Confidence            68888875543211     0  011122355555444333       38999999999987663321   1111222211


Q ss_pred             CCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       254 ~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+  + +     ..+..++|++++++.++.+... .+|+.+.+.++..+
T Consensus       224 ~~--~-~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       224 VP--L-G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             CC--C-C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence            11  1 1     1234789999999999976544 46789988877544

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.14  E-value=5.9e-10  Score=101.24  Aligned_cols=145  Identities=21%  Similarity=0.277  Sum_probs=90.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      |++|+||    ||+|+||++++++|+++|++|++++|+.++...+.        .+  .++.+..+|   .+++.++++.
T Consensus         1 ~k~vlIt----G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~--~~~~~~~~D~~d~~~~~~~~~~   66 (225)
T PRK08177          1 KRTALII----GASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ--------AL--PGVHIEKLDMNDPASLDQLLQR   66 (225)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH--------hc--cccceEEcCCCCHHHHHHHHHH
Confidence            4789999    99999999999999999999999999876543221        11  134555555   5555555443


Q ss_pred             ---CcccEEEeCCCC----------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCCCCC
Q 015746          151 ---VTFDVVLDNNGK----------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       151 ---~~~d~Vv~~a~~----------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                         .++|+|||++|.                      |+.+...+++++...   +..+++++||..  +.....+. + 
T Consensus        67 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~~~~-~-  142 (225)
T PRK08177         67 LQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVELPDG-G-  142 (225)
T ss_pred             hhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--cccccCCC-C-
Confidence               358999999873                      344555555555432   224788888743  22111110 0 


Q ss_pred             CCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecC
Q 015746          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGS  236 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~  236 (401)
                      ....+..+|.+.+.+.+.       .++.++.++||.+-.+
T Consensus       143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            111122345554444433       2688999999998665

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.14  E-value=2.7e-09  Score=91.11  Aligned_cols=193  Identities=14%  Similarity=0.174  Sum_probs=126.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~~  148 (401)
                      +.+.++||    ||+..||++|++.|.++|++|.+.+++.........       .+.. .+-..+.+|   +.++...+
T Consensus        13 ~sk~~~vt----Gg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~-------~L~g~~~h~aF~~DVS~a~~v~~~l   81 (256)
T KOG1200|consen   13 MSKVAAVT----GGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAG-------DLGGYGDHSAFSCDVSKAHDVQNTL   81 (256)
T ss_pred             hcceeEEe----cCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHh-------hcCCCCccceeeeccCcHHHHHHHH
Confidence            45789999    999999999999999999999999988865543221       1111 123334455   44444433


Q ss_pred             cC----C-cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC--CCEEEEeccccc-ccCCCC
Q 015746          149 GG----V-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG--VKQFLFISSAGI-YKPADE  196 (401)
Q Consensus       149 ~~----~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~g--v~~~v~~SS~~v-y~~~~~  196 (401)
                      +.    . .|+++|||||+                    |+.++.-+.+++-+    .+  .-++|.+||+-- -|....
T Consensus        82 ~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ  161 (256)
T KOG1200|consen   82 EEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ  161 (256)
T ss_pred             HHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc
Confidence            32    2 48999999995                    34444333333322    22  228999999432 121111


Q ss_pred             CCCCCCCCCCCCCChHH------------HHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQ------------VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~------------~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                   +.|+            +.|-+...++++..+-||+|-.|-... +.+..++.+....|...+|    
T Consensus       162 -------------tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~-mp~~v~~ki~~~iPmgr~G----  223 (256)
T KOG1200|consen  162 -------------TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEA-MPPKVLDKILGMIPMGRLG----  223 (256)
T ss_pred             -------------hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhh-cCHHHHHHHHccCCccccC----
Confidence                         2232            233344458999999999998874322 4455688888888887777    


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                           ..+|+|..+..+..+... ..|..+.+++|-
T Consensus       224 -----~~EevA~~V~fLAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  224 -----EAEEVANLVLFLASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             -----CHHHHHHHHHHHhccccccccceeEEEeccc
Confidence                 468999998887755443 457889888763

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.13  E-value=8.1e-10  Score=111.04  Aligned_cols=193  Identities=16%  Similarity=0.182  Sum_probs=116.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..++++|||    ||+|.||..++++|.++|++|++++|..... .        +.++ ...+..++.+|   .+++.++
T Consensus       208 ~~g~~vlIt----GasggIG~~la~~l~~~Ga~vi~~~~~~~~~-~--------l~~~~~~~~~~~~~~Dv~~~~~~~~~  274 (450)
T PRK08261        208 LAGKVALVT----GAARGIGAAIAEVLARDGAHVVCLDVPAAGE-A--------LAAVANRVGGTALALDITAPDAPARI  274 (450)
T ss_pred             CCCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCccHH-H--------HHHHHHHcCCeEEEEeCCCHHHHHHH
Confidence            356899999    9999999999999999999999998853211 0        0000 00123344444   5555555


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCC----CEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGV----KQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv----~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||++|.                    |+.++.++.+++.....    .+||++||...+....   
T Consensus       275 ~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~---  351 (450)
T PRK08261        275 AEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR---  351 (450)
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC---
Confidence            4421     47999999983                    46677778887766322    5899999976542211   


Q ss_pred             CCCCCCCCCCCChHHHHHH-----HH-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKY-----IS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~-----~~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|...|.     ..       +.++.++.+.||.+-.+....  .+.......+.. ..+ .      
T Consensus       352 ---------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~--~~~~~~~~~~~~-~~l-~------  412 (450)
T PRK08261        352 ---------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA--IPFATREAGRRM-NSL-Q------  412 (450)
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc--cchhHHHHHhhc-CCc-C------
Confidence                     1134544443     22       238899999999875432110  000011111100 011 1      


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .....+|+++++..++..... .+|+++.+.++.
T Consensus       413 ~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        413 QGGLPVDVAETIAWLASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             CCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            112468999999988875443 457899887653

>PRK05855 short chain dehydrogenase; Validated

Probab=99.13  E-value=1.1e-09  Score=113.50  Aligned_cols=194  Identities=16%  Similarity=0.104  Sum_probs=114.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ...+++|||    ||+|+||++++++|+++|++|++++|+.++...+...    ... ...++.++.+|   ++++.+++
T Consensus       313 ~~~~~~lv~----G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dv~~~~~~~~~~  383 (582)
T PRK05855        313 FSGKLVVVT----GAGSGIGRETALAFAREGAEVVASDIDEAAAERTAEL----IRA-AGAVAHAYRVDVSDADAMEAFA  383 (582)
T ss_pred             CCCCEEEEE----CCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCeEEEEEcCCCCHHHHHHHH
Confidence            345789999    9999999999999999999999999987544321110    000 01245666676   56666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCC-CEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGV-KQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv-~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+||.                    |+.++.+++++    +++.+. .+||++||...|...... 
T Consensus       384 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-  462 (582)
T PRK05855        384 EWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL-  462 (582)
T ss_pred             HHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC-
Confidence            432     47999999984                    45555555554    344442 489999999887643210 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc----HHHHHHHHHcCCCcccCCCCcceee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                            ..+..+|.+.+.+...       .|+++++|+||.+-.+-.....    ........ +......+.     ..
T Consensus       463 ------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~  530 (582)
T PRK05855        463 ------PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARR-RGRADKLYQ-----RR  530 (582)
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhH-Hhhhhhhcc-----cc
Confidence                  1112234433332221       3899999999998654211100    00000000 000000011     01


Q ss_pred             eeeHHHHHHHHHHHhcCCCc
Q 015746          268 IAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ....+|+|+.++.++.+...
T Consensus       531 ~~~p~~va~~~~~~~~~~~~  550 (582)
T PRK05855        531 GYGPEKVAKAIVDAVKRNKA  550 (582)
T ss_pred             CCCHHHHHHHHHHHHHcCCC
Confidence            13679999999999987654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.13  E-value=3.1e-09  Score=98.67  Aligned_cols=199  Identities=14%  Similarity=0.177  Sum_probs=113.7

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .++.+|||    ||+  +.||+.++++|+++|++|++.+|+.+..+.+...    ..++  ....++.+|   .+++.++
T Consensus         9 ~~k~~lIt----Gas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~----~~~~--~~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          9 AGKRGLVV----GIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPL----AEEL--DAPIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----HHhh--ccceEEecCcCCHHHHHHH
Confidence            46899999    998  5999999999999999999998875321111100    0011  123345555   5555554


Q ss_pred             hcCC-----cccEEEeCCCC------------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCC
Q 015746          148 VGGV-----TFDVVLDNNGK------------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      ++..     ++|++||+||.                        |+.+...+.+    .+++ + .++|++||.+.....
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-~-g~Ii~iss~~~~~~~  156 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-G-GSLLTMSYYGAEKVV  156 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-C-CEEEEEeccccccCC
Confidence            4332     48999999973                        2333333333    3332 2 479999986543211


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCccee
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                         +    ....+..+|.+...+.+    |   .|+++..|.||.+..+-... .......+......+.         .
T Consensus       157 ---~----~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~  220 (258)
T PRK07533        157 ---E----NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL---------R  220 (258)
T ss_pred             ---c----cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc---------C
Confidence               0    00111223444322222    2   37899999999986652111 0011112222222221         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      .+..++|+|.+++.++.+.. ...|+++.+.++.
T Consensus       221 r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        221 RLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGY  254 (258)
T ss_pred             CCCCHHHHHHHHHHHhChhhccccCcEEeeCCcc
Confidence            24578999999999987643 3557888887763

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.13  E-value=1.9e-09  Score=101.75  Aligned_cols=199  Identities=16%  Similarity=0.166  Sum_probs=114.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC------cccCCCCCCCcccchh--cCCCeEEEcC---H
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN------SDKMKKPPFNRFNEIV--SAGGKTVWGD---P  141 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~l~--~~~~~~~~~D---~  141 (401)
                      +++++|||    ||++.||+.++++|+++|++|++++|+...      .+.+..    ...++.  ...+.++.+|   .
T Consensus         5 ~~k~~lIT----Gas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~Dv~~~   76 (286)
T PRK07791          5 DGRVVIVT----GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQA----VVDEIVAAGGEAVANGDDIADW   76 (286)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHH----HHHHHHhcCCceEEEeCCCCCH
Confidence            46899999    999999999999999999999998876511      000000    011111  1234455566   5


Q ss_pred             hhHHHhhcC----C-cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC------CCEEEEec
Q 015746          142 AEVGNVVGG----V-TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG------VKQFLFIS  186 (401)
Q Consensus       142 ~~~~~~~~~----~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~g------v~~~v~~S  186 (401)
                      +++.++++.    . ++|++||+||.                    |+.++..+++++    ++.+      -.+||++|
T Consensus        77 ~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~is  156 (286)
T PRK07791         77 DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTS  156 (286)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeC
Confidence            555554432    1 48999999984                    444544444433    2221      14899999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccC
Q 015746          187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       187 S~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  259 (401)
                      |...+.....       ...+..+|.+.+.+.+    |   .|++++.|.|+ +..+     +............+.   
T Consensus       157 S~~~~~~~~~-------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~-----~~~~~~~~~~~~~~~---  220 (286)
T PRK07791        157 SGAGLQGSVG-------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR-----MTETVFAEMMAKPEE---  220 (286)
T ss_pred             chhhCcCCCC-------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC-----cchhhHHHHHhcCcc---
Confidence            9665332111       0111223433332222    2   48999999998 4222     111112222211111   


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        +  ...+..++|+|++++.++..... .+|+++.+.++.
T Consensus       221 --~--~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        221 --G--EFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             --c--ccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence              1  11245799999999998876543 567899888775

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.11  E-value=4.5e-09  Score=95.98  Aligned_cols=185  Identities=15%  Similarity=0.121  Sum_probs=110.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      |+|+||    ||+|+||++++++|+++|  +.|....|+....             ....++.++.+|   .+++.++.+
T Consensus         1 ~~vlIt----Gas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------------~~~~~~~~~~~Dls~~~~~~~~~~   63 (235)
T PRK09009          1 MNILIV----GGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------------FQHDNVQWHALDVTDEAEIKQLSE   63 (235)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------------cccCceEEEEecCCCHHHHHHHHH
Confidence            689999    999999999999999986  4555555544211             112355666777   555555544


Q ss_pred             CC-cccEEEeCCCCC--------------------------hh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          150 GV-TFDVVLDNNGKN--------------------------LD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       150 ~~-~~d~Vv~~a~~~--------------------------~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      .. ++|+|||++|..                          +.    .++.++..+++.+..+++++||..  +.....+
T Consensus        64 ~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~~  141 (235)
T PRK09009         64 QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDNR  141 (235)
T ss_pred             hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccCC
Confidence            33 479999999842                          11    223344445545556899998732  1111011


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                      .  .....+..+|.+++.+.+.         .++.+..+.||.+..+....         +....+         ...+.
T Consensus       142 ~--~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~~---------~~~~~  201 (235)
T PRK09009        142 L--GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNVP---------KGKLF  201 (235)
T ss_pred             C--CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhccc---------cCCCC
Confidence            1  0111233455555544332         25778889999987764221         111111         12246


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ..+|+|++++.++..... ..|..+.+.++
T Consensus       202 ~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        202 TPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             CHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            889999999999987653 35677776654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.11  E-value=3.3e-09  Score=98.66  Aligned_cols=200  Identities=12%  Similarity=0.079  Sum_probs=114.5

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~  144 (401)
                      ..+|.+|||    ||++  .||..++++|+++|++|++..|+....+.+        .++..  ....++.+|   ++++
T Consensus         6 ~~~k~~lIT----Gas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~--------~~l~~~~g~~~~~~~Dv~~~~~v   73 (260)
T PRK06603          6 LQGKKGLIT----GIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRV--------KPLAEEIGCNFVSELDVTNPKSI   73 (260)
T ss_pred             cCCcEEEEE----CCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHH--------HHHHHhcCCceEEEccCCCHHHH
Confidence            346889999    9997  799999999999999999888763211111        11110  011234455   6666


Q ss_pred             HHhhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~  193 (401)
                      .++++..     ++|++||+++.                        |+.+...+++++...  .-.++|++||......
T Consensus        74 ~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~  153 (260)
T PRK06603         74 SNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV  153 (260)
T ss_pred             HHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC
Confidence            6555321     48999999873                        122333333332211  1147999999664321


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcce
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                      ..       ....+..+|.+.+.+.+.       .|+++..|.||.+-.+.... .-.......+....|.         
T Consensus       154 ~~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------  217 (260)
T PRK06603        154 IP-------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL---------  217 (260)
T ss_pred             CC-------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc---------
Confidence            10       011123455554443322       37899999999986652110 0001112222222222         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+..++|+|++++.++..... .+|+++.+.++.
T Consensus       218 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        218 KRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             CCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcc
Confidence            1235789999999999986543 457888888764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.11  E-value=3.5e-09  Score=99.20  Aligned_cols=201  Identities=14%  Similarity=0.134  Sum_probs=116.3

Q ss_pred             cccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      +.++.+|||    ||+  +.||..++++|+++|++|++..|+....+.+...    ..++  .....+.+|   .+++.+
T Consensus         8 ~~~k~~lIt----Gas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l----~~~~--~~~~~~~~Dl~~~~~v~~   77 (272)
T PRK08159          8 MAGKRGLIL----GVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPL----AAEL--GAFVAGHCDVTDEASIDA   77 (272)
T ss_pred             ccCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH----HHhc--CCceEEecCCCCHHHHHH
Confidence            345889999    997  8999999999999999999887753211111000    0011  123345566   566665


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|++||+||.                        |+.+...+++++...  +-.++|++||.+..... 
T Consensus        78 ~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-  156 (272)
T PRK08159         78 VFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM-  156 (272)
T ss_pred             HHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC-
Confidence            54332     48999999973                        344444555544432  12489999986543211 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHc-CCCcccCCCCccee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVR-KRPVPIPGSGMQFT  266 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~  266 (401)
                        |    ....+..+|.+...+.+.       .|+++..|.||.+..+.... .-... ...... ..|.         .
T Consensus       157 --p----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~p~---------~  220 (272)
T PRK08159        157 --P----HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRY-ILKWNEYNAPL---------R  220 (272)
T ss_pred             --C----cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchH-HHHHHHhCCcc---------c
Confidence              0    011122355554333322       37899999999986542110 00000 111111 1111         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+..++|+|++++.++..... .+|+++.+.++.
T Consensus       221 r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             ccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence            245789999999999986543 567899998875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.10  E-value=4.6e-09  Score=97.80  Aligned_cols=205  Identities=12%  Similarity=0.127  Sum_probs=115.4

Q ss_pred             ccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      .++.+|||    ||++  .||+.++++|+++|++|++..|+....+..        .++.  ...+.++.+|   ++++.
T Consensus         5 ~~k~~lIT----Gas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~--------~~~~~~~~~~~~~~~Dl~~~~~v~   72 (262)
T PRK07984          5 SGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV--------EEFAAQLGSDIVLPCDVAEDASID   72 (262)
T ss_pred             CCCEEEEe----CCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHH--------HHHHhccCCceEeecCCCCHHHHH
Confidence            45789999    9985  899999999999999999888863111110        1111  0123455566   56666


Q ss_pred             HhhcC----C-cccEEEeCCCC-------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccC
Q 015746          146 NVVGG----V-TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (401)
Q Consensus       146 ~~~~~----~-~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~  193 (401)
                      +++..    . ++|++||++|.                         |+.+...+.+++...  .-.++|++||.+....
T Consensus        73 ~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~  152 (262)
T PRK07984         73 AMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA  152 (262)
T ss_pred             HHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC
Confidence            55533    1 47999999983                         122222333333221  1147999998664321


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcce
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                      ..       ....+..+|.+.+.+.+.       .|+++..|.||.+..+.... .-.....+.+....+.         
T Consensus       153 ~~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------  216 (262)
T PRK07984        153 IP-------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------  216 (262)
T ss_pred             CC-------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC---------
Confidence            10       011122344444333222       37899999999986642110 0001111222212221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC-CCHHH
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA-VTLDG  305 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~-~t~~e  305 (401)
                      ..+..++|++.++..++.+... ..|+++.+.++.. +.++|
T Consensus       217 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~~~~~~  258 (262)
T PRK07984        217 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNE  258 (262)
T ss_pred             cCCCCHHHHHHHHHHHcCcccccccCcEEEECCCccccccch
Confidence            1245789999999999876543 5578888887642 34443

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.08  E-value=4.3e-09  Score=97.90  Aligned_cols=201  Identities=13%  Similarity=0.126  Sum_probs=111.7

Q ss_pred             ccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      +.++||||    ||  ++.||..++++|+++|++|++..|.....+.+...    ..++  .....+.+|   ++++.++
T Consensus         5 ~~k~vlIt----Gas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          5 AGKRILIT----GLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEF----AAEF--GSDLVFPCDVASDEQIDAL   74 (260)
T ss_pred             CCcEEEEe----CCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHH----HHhc--CCcceeeccCCCHHHHHHH
Confidence            45889999    96  67999999999999999999876542211111000    0001  112234444   6666665


Q ss_pred             hcCC-----cccEEEeCCCCC-------------------------hhhHHHHHHHHHhC--CCCEEEEecccccccCCC
Q 015746          148 VGGV-----TFDVVLDNNGKN-------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~~-------------------------~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~  195 (401)
                      ++..     ++|++||+||..                         +.+...+.+++...  +-.++|++||....... 
T Consensus        75 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~-  153 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV-  153 (260)
T ss_pred             HHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC-
Confidence            5432     489999999741                         12222233332221  12479999986643211 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                          ..  ...+..+|.+...+.+    |   .|++++.|.||.+-.+..... -.....+.+....+.         ..
T Consensus       154 ----~~--~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r  218 (260)
T PRK06997        154 ----PN--YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL---------RR  218 (260)
T ss_pred             ----CC--cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc---------cc
Confidence                00  0012234444333222    2   378999999999866421110 001111112111121         12


Q ss_pred             eeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      +..++|+++++..++.... ..+|+++.+.++.
T Consensus       219 ~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        219 NVTIEEVGNVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             cCCHHHHHHHHHHHhCccccCcceeEEEEcCCh
Confidence            4578999999999998754 3567899888764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.08  E-value=2.6e-09  Score=100.20  Aligned_cols=199  Identities=12%  Similarity=0.103  Sum_probs=112.7

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .+|.||||    ||+  +.||+.++++|+++|++|++.+|+.+..+.+...    ..++. .. .++.+|   .+++.++
T Consensus         4 ~~k~~lIt----Gas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~----~~~~~-~~-~~~~~Dv~d~~~v~~~   73 (274)
T PRK08415          4 KGKKGLIV----GVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPI----AQELG-SD-YVYELDVSKPEHFKSL   73 (274)
T ss_pred             CCcEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHH----HHhcC-Cc-eEEEecCCCHHHHHHH
Confidence            46899999    997  7999999999999999999988874211111000    00111 11 345555   5555555


Q ss_pred             hcCC-----cccEEEeCCCC------------------------ChhhHH----HHHHHHHhCCCCEEEEecccccccCC
Q 015746          148 VGGV-----TFDVVLDNNGK------------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~------------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      ++..     ++|++||+||.                        |+.+..    .++..+++.  .++|++||.+.....
T Consensus        74 ~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~  151 (274)
T PRK08415         74 AESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKYV  151 (274)
T ss_pred             HHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccCC
Confidence            4332     48999999983                        223333    333333332  479999986533211


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCccee
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                         +    ....+..+|.+...+.+    |   .|+++..|.||.+..+..... -............|.         .
T Consensus       152 ---~----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~  215 (274)
T PRK08415        152 ---P----HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL---------K  215 (274)
T ss_pred             ---C----cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch---------h
Confidence               0    00112234444332222    2   378999999999876421100 000000000011111         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      -+..++|+|++++.++.... ..+|+++.+.++.
T Consensus       216 r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence            24578999999999988653 3567899888875

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.08  E-value=5.1e-09  Score=100.19  Aligned_cols=111  Identities=21%  Similarity=0.220  Sum_probs=73.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++++++||    ||++.||.+++++|+++| ++|++++|+.++...+...    +. .....+.++.+|   .+++.+++
T Consensus         2 ~~k~vlIT----Gas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         2 QKPTVIIT----GASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKS----LG-MPKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH----hc-CCCCeEEEEEcCCCCHHHHHHHH
Confidence            35789999    999999999999999999 9999999987544322110    00 011235556666   55555544


Q ss_pred             cC-----CcccEEEeCCCC---------------------Chhh----HHHHHHHHHhCC--CCEEEEeccccccc
Q 015746          149 GG-----VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYK  192 (401)
Q Consensus       149 ~~-----~~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~g--v~~~v~~SS~~vy~  192 (401)
                      +.     .++|++||+||.                     |+.+    ++.++..+++.+  ..+||++||...+.
T Consensus        73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~  148 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT  148 (314)
T ss_pred             HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence            32     148999999983                     2222    344455555543  35899999987653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.07  E-value=5.7e-09  Score=96.16  Aligned_cols=81  Identities=19%  Similarity=0.257  Sum_probs=56.2

Q ss_pred             cccccccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---Hh
Q 015746           66 TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PA  142 (401)
Q Consensus        66 ~~~~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~  142 (401)
                      ++.....++++++||    ||+|+||++++++|+++|++|++++|+.........          ......+.+|   .+
T Consensus         6 ~~~~~~l~~k~~lIT----Gas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~   71 (245)
T PRK12367          6 PMAQSTWQGKRIGIT----GASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----------ESPNEWIKWECGKEE   71 (245)
T ss_pred             hhhHHhhCCCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----------cCCCeEEEeeCCCHH
Confidence            334444567899999    999999999999999999999999987622111000          0011233444   66


Q ss_pred             hHHHhhcCCcccEEEeCCCC
Q 015746          143 EVGNVVGGVTFDVVLDNNGK  162 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~~  162 (401)
                      ++.+.+..  +|++||+||.
T Consensus        72 ~~~~~~~~--iDilVnnAG~   89 (245)
T PRK12367         72 SLDKQLAS--LDVLILNHGI   89 (245)
T ss_pred             HHHHhcCC--CCEEEECCcc
Confidence            66666654  6999999984

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.04  E-value=6.9e-09  Score=96.26  Aligned_cols=199  Identities=11%  Similarity=0.053  Sum_probs=112.2

Q ss_pred             ccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCCC--CcccCCCCCCCcccchhcCCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~  145 (401)
                      .+++++||    ||  ++.||.+++++|+++|++|++++|+..  ..+.+..       ++ ...+.++.+|   ++++.
T Consensus         6 ~~k~~lIt----Ga~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~-------~~-~~~~~~~~~Dv~~~~~i~   73 (256)
T PRK07889          6 EGKRILVT----GVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK-------RL-PEPAPVLELDVTNEEHLA   73 (256)
T ss_pred             cCCEEEEe----CCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHH-------hc-CCCCcEEeCCCCCHHHHH
Confidence            45789999    99  899999999999999999999987641  1111110       11 1134556666   55555


Q ss_pred             HhhcC-----CcccEEEeCCCCC------------------------hhhHHHHHHHHHhC--CCCEEEEecccccccCC
Q 015746          146 NVVGG-----VTFDVVLDNNGKN------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKPA  194 (401)
Q Consensus       146 ~~~~~-----~~~d~Vv~~a~~~------------------------~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~  194 (401)
                      ++++.     -++|++||+||..                        +.+...+.+++...  .-.++|++|+.+..+.+
T Consensus        74 ~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~  153 (256)
T PRK07889         74 SLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWP  153 (256)
T ss_pred             HHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCC
Confidence            55432     1489999999842                        22222333332211  11478888764321110


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCccee
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                      .        ...+..+|.+...+.+.       .|+++..|.||.+..+..... ......+.+....++.        +
T Consensus       154 ~--------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--------~  217 (256)
T PRK07889        154 A--------YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLG--------W  217 (256)
T ss_pred             c--------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccc--------c
Confidence            0        00012345443332222       388999999999876521110 0011111111111110        1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+..++|+|++++.++.+... ..|+++.+.++.
T Consensus       218 ~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        218 DVKDPTPVARAVVALLSDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             ccCCHHHHHHHHHHHhCcccccccceEEEEcCce
Confidence            245789999999999987543 457888887763

>PRK06484 short chain dehydrogenase; Validated

Probab=99.03  E-value=6.3e-09  Score=106.54  Aligned_cols=198  Identities=13%  Similarity=0.146  Sum_probs=116.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .++.+|||    ||++.||..++++|+++|++|++++|+.++...+..       ++ ...+.++.+|   ++++.++++
T Consensus         4 ~~k~~lIT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~   71 (520)
T PRK06484          4 QSRVVLVT----GAAGGIGRAACQRFARAGDQVVVADRNVERARERAD-------SL-GPDHHALAMDVSDEAQIREGFE   71 (520)
T ss_pred             CCeEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hh-CCceeEEEeccCCHHHHHHHHH
Confidence            45789999    999999999999999999999999998765432211       11 1133445555   666666554


Q ss_pred             CC-----cccEEEeCCCC----------------------ChhhHHHHH----HHHHhCCCC-EEEEecccccccCCCCC
Q 015746          150 GV-----TFDVVLDNNGK----------------------NLDAVRPVA----DWAKSSGVK-QFLFISSAGIYKPADEP  197 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~----------------------~~~~~~~ll----~aa~~~gv~-~~v~~SS~~vy~~~~~~  197 (401)
                      ..     ++|++||++|.                      |+.++..++    ...++.+-. ++|++||......... 
T Consensus        72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~-  150 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK-  150 (520)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC-
Confidence            32     48999999874                      233333344    444333433 8999999765433211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcH-HHH-HHHHHcCCCcccCCCCcceeee
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWF-FDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                            ...+..+|.+.+.+.+.       .+++++.|+||.+..+....... ... ...+....+         ...+
T Consensus       151 ------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~  215 (520)
T PRK06484        151 ------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIP---------LGRL  215 (520)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCC---------CCCC
Confidence                  11122355554443322       37899999999886553211000 000 011111111         1124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ...+|+++++..++..... ..|+++.+.++
T Consensus       216 ~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        216 GRPEEIAEAVFFLASDQASYITGSTLVVDGG  246 (520)
T ss_pred             cCHHHHHHHHHHHhCccccCccCceEEecCC
Confidence            5789999999988876432 34566666544

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.02  E-value=2.5e-09  Score=102.52  Aligned_cols=172  Identities=15%  Similarity=0.127  Sum_probs=104.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC-----Hh---hH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD-----PA---EV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D-----~~---~~  144 (401)
                      ++.++||    ||+|.||++++++|+++|++|++++|+.++.+.+...    +... ....+..+.+|     .+   .+
T Consensus        53 g~~~lIT----GAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~----l~~~~~~~~~~~~~~Dl~~~~~~~~~~l  124 (320)
T PLN02780         53 GSWALVT----GPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS----IQSKYSKTQIKTVVVDFSGDIDEGVKRI  124 (320)
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH----HHHHCCCcEEEEEEEECCCCcHHHHHHH
Confidence            5789999    9999999999999999999999999988654432110    0000 00123333334     22   23


Q ss_pred             HHhhcCCcccEEEeCCCC----------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK----------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~----------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      .+.+.+..+|++||+||.                      |+.++.++.+    .+++.+..++|++||...+.... . 
T Consensus       125 ~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~-  202 (320)
T PLN02780        125 KETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-D-  202 (320)
T ss_pred             HHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-C-
Confidence            334444446799999983                      3334444444    44455666899999977642110 0 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                              |..+.|++.|...+            .|++++.++||.+-.+-..          . ....          .
T Consensus       203 --------p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~-~~~~----------~  253 (320)
T PLN02780        203 --------PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I-RRSS----------F  253 (320)
T ss_pred             --------ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c-cCCC----------C
Confidence                    11245555553322            2789999999998665211          0 0000          0


Q ss_pred             eeeeHHHHHHHHHHHhcC
Q 015746          267 NIAHVRDLSSMLTLAVEN  284 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~  284 (401)
                      .....+++|+.++..+..
T Consensus       254 ~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        254 LVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CCCCHHHHHHHHHHHhCC
Confidence            124678899998888853

>PRK05599 hypothetical protein; Provisional

Probab=99.00  E-value=4.9e-09  Score=96.64  Aligned_cols=184  Identities=16%  Similarity=0.188  Sum_probs=108.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC-
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~-  150 (401)
                      |.+|||    ||++.||..++++|. +|++|++++|+.++.+.+..    ++.+.....+.++.+|   .+++.++++. 
T Consensus         1 ~~vlIt----Gas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   71 (246)
T PRK05599          1 MSILIL----GGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLAS----DLRQRGATSVHVLSFDAQDLDTHRELVKQT   71 (246)
T ss_pred             CeEEEE----eCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHH----HHHhccCCceEEEEcccCCHHHHHHHHHHH
Confidence            579999    999999999999998 59999999998765443211    0111111135566666   4555444332 


Q ss_pred             ---C-cccEEEeCCCCC--------------------hhhH----HHHHHHHHhCC-CCEEEEecccccccCCCCCCCCC
Q 015746          151 ---V-TFDVVLDNNGKN--------------------LDAV----RPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ---~-~~d~Vv~~a~~~--------------------~~~~----~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                         . ++|++||++|..                    +.+.    ..++..+++.+ -.++|++||...+....      
T Consensus        72 ~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------  145 (246)
T PRK05599         72 QELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR------  145 (246)
T ss_pred             HHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc------
Confidence               1 489999999841                    1122    23334444433 35899999976542211      


Q ss_pred             CCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                       ....+..+|.+.+.+.+.       .+++++.+.||.+..+....            ..+.+.         ...++|+
T Consensus       146 -~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~------------~~~~~~---------~~~pe~~  203 (246)
T PRK05599        146 -ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG------------MKPAPM---------SVYPRDV  203 (246)
T ss_pred             -CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC------------CCCCCC---------CCCHHHH
Confidence             011223355554443322       37888999999886542100            011000         1468999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecC
Q 015746          275 SSMLTLAVENPEAASSNIFNLVS  297 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~  297 (401)
                      |+.++.++.+...  ++.+.+.+
T Consensus       204 a~~~~~~~~~~~~--~~~~~~~~  224 (246)
T PRK05599        204 AAAVVSAITSSKR--STTLWIPG  224 (246)
T ss_pred             HHHHHHHHhcCCC--CceEEeCc
Confidence            9999999998654  24555543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.95  E-value=2.7e-09  Score=98.93  Aligned_cols=193  Identities=16%  Similarity=0.134  Sum_probs=106.4

Q ss_pred             eEEEEecCCCccccchHHHHHHHHh----CCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHh
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLG----SGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .||||    ||++.||.+++++|++    +|++|+++.|+.+....+..    .+.. .....+.++.+|   .+++.++
T Consensus         2 ~vlIt----Gas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~----~l~~~~~~~~v~~~~~Dl~~~~~v~~~   73 (256)
T TIGR01500         2 VCLVT----GASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKA----EIGAERSGLRVVRVSLDLGAEAGLEQL   73 (256)
T ss_pred             EEEEe----cCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHH----HHHhcCCCceEEEEEeccCCHHHHHHH
Confidence            58999    9999999999999997    79999999998765432211    0000 001235566666   5555544


Q ss_pred             hcCC---------cccEEEeCCCC-----------------------ChhhH----HHHHHHHHhC-C-CCEEEEecccc
Q 015746          148 VGGV---------TFDVVLDNNGK-----------------------NLDAV----RPVADWAKSS-G-VKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~---------~~d~Vv~~a~~-----------------------~~~~~----~~ll~aa~~~-g-v~~~v~~SS~~  189 (401)
                      ++..         ..|+|||+||.                       |+.+.    +.++..+++. + -.++|++||..
T Consensus        74 ~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~  153 (256)
T TIGR01500        74 LKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLC  153 (256)
T ss_pred             HHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHH
Confidence            4321         23689999983                       12222    3344444433 2 24899999977


Q ss_pred             cccCCCCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcH-----HHHHHHHHcCCCcc
Q 015746          190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVP  257 (401)
Q Consensus       190 vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~  257 (401)
                      .+.....       ...+..+|.+.+.+.+.       .++.+..+.||.+-.+.... ..     ......+....+. 
T Consensus       154 ~~~~~~~-------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~-  224 (256)
T TIGR01500       154 AIQPFKG-------WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ-VREESVDPDMRKGLQELKAK-  224 (256)
T ss_pred             hCCCCCC-------chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH-HHHhcCChhHHHHHHHHHhc-
Confidence            5432110       00011234333333222       26888999999986542100 00     0000011111111 


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEE
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  293 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~  293 (401)
                              ..+..++|+|..++.++++.....|+.+
T Consensus       225 --------~~~~~p~eva~~~~~l~~~~~~~~G~~~  252 (256)
T TIGR01500       225 --------GKLVDPKVSAQKLLSLLEKDKFKSGAHV  252 (256)
T ss_pred             --------CCCCCHHHHHHHHHHHHhcCCcCCccee
Confidence                    1245789999999999975444444443

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.92  E-value=1.2e-08  Score=88.02  Aligned_cols=144  Identities=15%  Similarity=0.176  Sum_probs=92.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++++||    ||+|+||.+++++|+++|+ .|+++.|+.+.......    .+..+.  ...+.++.+|   .+++.+++
T Consensus         1 ~~~li~----Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (180)
T smart00822        1 GTYLIT----GGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE----LLAELEALGAEVTVVACDVADRAALAAAL   72 (180)
T ss_pred             CEEEEE----cCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH----HHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            479999    9999999999999999996 68888887643321100    001111  1244566666   45555554


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEeccccc-ccCCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~v-y~~~~~~~~~E~  202 (401)
                      ...     .+|.|||+++.                    |+.+..++++++++.+.+++|++||... ++....      
T Consensus        73 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~------  146 (180)
T smart00822       73 AAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQ------  146 (180)
T ss_pred             HHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCc------
Confidence            332     36999999983                    4677888999998888789999998654 332111      


Q ss_pred             CCCCCCCChHHHHHHHH---HhCCCeEEEecCeee
Q 015746          203 DVVKPDAGHVQVEKYIS---ENFSNWASFRPQYMI  234 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~---e~g~~~~ilRp~~v~  234 (401)
                        ..+..+|...+.++.   ..+++++.+.||.+-
T Consensus       147 --~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 --ANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             --hhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence              111224444444443   347888888887653

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.91  E-value=1e-08  Score=94.61  Aligned_cols=149  Identities=20%  Similarity=0.184  Sum_probs=96.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcC-CCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D---~~~~~~~  147 (401)
                      ..+|.|+||    ||+..||.+++.+|.++|.+++.+.|..+..+.+.+    ++..+... ++.++.+|   .+++.+.
T Consensus        10 ~~~kvVvIT----GASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~----~l~~~~~~~~v~~~~~Dvs~~~~~~~~   81 (282)
T KOG1205|consen   10 LAGKVVLIT----GASSGIGEALAYELAKRGAKLVLVARRARRLERVAE----ELRKLGSLEKVLVLQLDVSDEESVKKF   81 (282)
T ss_pred             hCCCEEEEe----CCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHH----HHHHhCCcCccEEEeCccCCHHHHHHH
Confidence            457899999    999999999999999999998888887766654421    11222222 47888888   4555544


Q ss_pred             hc----CC-cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VG----GV-TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~----~~-~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++    .. ++|++||+||.                    |+    ..|+.++..+++.+-.|+|.+||+.-+-..   |
T Consensus        82 ~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~---P  158 (282)
T KOG1205|consen   82 VEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL---P  158 (282)
T ss_pred             HHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC---C
Confidence            32    22 47999999994                    43    445666666777775699999998755332   2


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH----hCCCe--E--EEecCeeec
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE----NFSNW--A--SFRPQYMIG  235 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e----~g~~~--~--ilRp~~v~G  235 (401)
                      +..    -+..+|++.+.+...    .....  +  ++-||.|-.
T Consensus       159 ~~~----~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~T  199 (282)
T KOG1205|consen  159 FRS----IYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIET  199 (282)
T ss_pred             ccc----ccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceee
Confidence            221    233467776554433    22222  2  367777644

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.89  E-value=3.3e-08  Score=97.10  Aligned_cols=90  Identities=20%  Similarity=0.206  Sum_probs=63.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+|+||    ||+|+||++++++|+++|++|++++|+.++......       .. ..++..+.+|   .+++.+.+
T Consensus       176 l~gK~VLIT----GASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~-------~~-~~~v~~v~~Dvsd~~~v~~~l  243 (406)
T PRK07424        176 LKGKTVAVT----GASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN-------GE-DLPVKTLHWQVGQEAALAELL  243 (406)
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------hc-CCCeEEEEeeCCCHHHHHHHh
Confidence            356899999    999999999999999999999999987654321100       00 0123344444   66777777


Q ss_pred             cCCcccEEEeCCCC-----------------ChhhHHHHHHHHH
Q 015746          149 GGVTFDVVLDNNGK-----------------NLDAVRPVADWAK  175 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~-----------------~~~~~~~ll~aa~  175 (401)
                      .+  +|++||++|.                 |+.++.++++++.
T Consensus       244 ~~--IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l  285 (406)
T PRK07424        244 EK--VDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFF  285 (406)
T ss_pred             CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65  6999999983                 5566666666653

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.86  E-value=1.7e-07  Score=88.84  Aligned_cols=206  Identities=9%  Similarity=0.040  Sum_probs=111.7

Q ss_pred             cccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCCCCcccCCC----CCCCcccchhcC----CCeEEEcCH
Q 015746           72 AEKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK----PPFNRFNEIVSA----GGKTVWGDP  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~l~~~----~~~~~~~D~  141 (401)
                      .++|.+|||    ||  +..||..+++.|.++|++|++ .|..+..+.+..    ....+...+...    ....+.+|.
T Consensus         7 l~gk~alIT----Ga~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          7 LRGKRAFIA----GVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCCCEEEEe----CCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            457899999    99  899999999999999999988 655443322110    000000000000    012222231


Q ss_pred             -----------------------hhHHHhhcCC-----cccEEEeCCCC----------------------ChhhH----
Q 015746          142 -----------------------AEVGNVVGGV-----TFDVVLDNNGK----------------------NLDAV----  167 (401)
Q Consensus       142 -----------------------~~~~~~~~~~-----~~d~Vv~~a~~----------------------~~~~~----  167 (401)
                                             +++.++++..     ++|++||+||.                      |+.+.    
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence                                   2455544331     48999999952                      33333    


Q ss_pred             HHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHH----HH----hCCCeEEEecCeeecCCCC
Q 015746          168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI----SE----NFSNWASFRPQYMIGSGNN  239 (401)
Q Consensus       168 ~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~----~e----~g~~~~ilRp~~v~G~~~~  239 (401)
                      +.++..+++.  .++|++||.........  +    ...+..+|.+.+.+.    .|    .|+++..|.||.+..+...
T Consensus       162 ~~~~p~m~~~--G~II~isS~a~~~~~p~--~----~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~  233 (303)
T PLN02730        162 QHFGPIMNPG--GASISLTYIASERIIPG--Y----GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAK  233 (303)
T ss_pred             HHHHHHHhcC--CEEEEEechhhcCCCCC--C----chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhh
Confidence            3444444443  48999999765322110  0    001122444433322    22    3678899999988765321


Q ss_pred             CC-cHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          240 KD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .. ........+....++         ..+...+|++.+++.++..... ..|+++.+.++.
T Consensus       234 ~~~~~~~~~~~~~~~~pl---------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        234 AIGFIDDMIEYSYANAPL---------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             cccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            10 001111111111121         1234789999999999986543 457888887764

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.83  E-value=6.4e-08  Score=92.17  Aligned_cols=206  Identities=15%  Similarity=0.133  Sum_probs=109.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCC--CCCCCcc-cchhc--CCCeEEEcC---Hhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK--KPPFNRF-NEIVS--AGGKTVWGD---PAE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~--~~~~~~~-~~l~~--~~~~~~~~D---~~~  143 (401)
                      ..++.+|||    ||++.||.+++++|+++|++|++++|+........  ....... ..+..  ..+.++.+|   +++
T Consensus         6 l~~k~~lIT----Ggs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          6 LRGKVALVA----GATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            346899999    99999999999999999999999999753221000  0000000 11111  134556666   556


Q ss_pred             HHHhhcCC-----cccEEEeCC-CC------------------------Chhh----HHHHHHHHHhCCCCEEEEecccc
Q 015746          144 VGNVVGGV-----TFDVVLDNN-GK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       144 ~~~~~~~~-----~~d~Vv~~a-~~------------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      +.++++..     ++|++||++ +.                        |+.+    ++.++..+++.+-.++|++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            65554432     479999998 52                        1112    23344444444335899999854


Q ss_pred             c-ccCCCCCCCCCCCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCc--HHHHHHHHHcCCCcccC
Q 015746          190 I-YKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       190 v-y~~~~~~~~~E~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~  259 (401)
                      . ++...   ..  ....+..+|.++..+.+    |   .|+++..|.||.+-.+......  ............+  ..
T Consensus       162 ~~~~~~~---~~--~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p--~~  234 (305)
T PRK08303        162 AEYNATH---YR--LSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEP--HF  234 (305)
T ss_pred             ccccCcC---CC--CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhcccc--cc
Confidence            3 22110   00  00112234444333322    2   3789999999988554100000  0000000000001  00


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc--CCCcEEE
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFN  294 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~g~~~~  294 (401)
                            .-+..++|+|.+++.++.++..  .+|+++.
T Consensus       235 ------~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        235 ------AISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             ------ccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence                  1123689999999999987642  3445543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.83  E-value=6.2e-08  Score=89.01  Aligned_cols=185  Identities=11%  Similarity=0.014  Sum_probs=110.6

Q ss_pred             HHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC--cccEEEeCCCC---------
Q 015746           94 LAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--TFDVVLDNNGK---------  162 (401)
Q Consensus        94 l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~--~~d~Vv~~a~~---------  162 (401)
                      ++++|+++|++|++++|+.++...         .    .-+.+...|.+++.++++..  ++|+|||+||.         
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~---------~----~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~   67 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL---------D----GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV   67 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh---------h----HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence            478999999999999998754210         0    01233334577777776643  58999999983         


Q ss_pred             ---ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCC---------------CCCCCCCChHHHHHHH----
Q 015746          163 ---NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG---------------DVVKPDAGHVQVEKYI----  218 (401)
Q Consensus       163 ---~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~---------------~~~~~~~~~~~~ek~~----  218 (401)
                         |+.++..+++++...  .-.+||++||...|+.....+..+.               ....+....|...|..    
T Consensus        68 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~  147 (241)
T PRK12428         68 ARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILW  147 (241)
T ss_pred             hhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHH
Confidence               677777888877653  2258999999998864322111111               0112223456655532    


Q ss_pred             ------HH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-C
Q 015746          219 ------SE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  288 (401)
Q Consensus       219 ------~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~  288 (401)
                            .+   .|++++.|+||.+.++.... .....-....... . .     ....+..++|+|++++.++..... .
T Consensus       148 ~~~la~~e~~~~girvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~-~-~-----~~~~~~~pe~va~~~~~l~s~~~~~~  219 (241)
T PRK12428        148 TMRQAQPWFGARGIRVNCVAPGPVFTPILGD-FRSMLGQERVDSD-A-K-----RMGRPATADEQAAVLVFLCSDAARWI  219 (241)
T ss_pred             HHHHHHHhhhccCeEEEEeecCCccCccccc-chhhhhhHhhhhc-c-c-----ccCCCCCHHHHHHHHHHHcChhhcCc
Confidence                  22   37899999999998874221 0000000000000 0 0     011245789999999998865443 4


Q ss_pred             CCcEEEecCCC
Q 015746          289 SSNIFNLVSDR  299 (401)
Q Consensus       289 ~g~~~~~~~~~  299 (401)
                      .|+.+.+.++.
T Consensus       220 ~G~~i~vdgg~  230 (241)
T PRK12428        220 NGVNLPVDGGL  230 (241)
T ss_pred             cCcEEEecCch
Confidence            56888777663

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.83  E-value=1.1e-07  Score=88.66  Aligned_cols=210  Identities=17%  Similarity=0.129  Sum_probs=124.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH--
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN--  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~--  146 (401)
                      ..+|.+|||    ||+..||+.++++|++.|.+|++.+|+.+...........  .......+..+.+|   .++..+  
T Consensus         6 l~gkvalVT----G~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~l~   79 (270)
T KOG0725|consen    6 LAGKVALVT----GGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGG--LGYTGGKVLAIVCDVSKEVDVEKLV   79 (270)
T ss_pred             CCCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCCCeeEEEECcCCCHHHHHHHH
Confidence            357899999    9999999999999999999999999998764332110000  00002346667777   233332  


Q ss_pred             --hhcC--CcccEEEeCCCC---------------------Chh-hHHHHH----HHHHhCCCCEEEEecccccccCCCC
Q 015746          147 --VVGG--VTFDVVLDNNGK---------------------NLD-AVRPVA----DWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 --~~~~--~~~d~Vv~~a~~---------------------~~~-~~~~ll----~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                        .++.  -++|++||++|.                     |+. ....+.    ..+++.+-..++++||...+.....
T Consensus        80 ~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~  159 (270)
T KOG0725|consen   80 EFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG  159 (270)
T ss_pred             HHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC
Confidence              3333  248999999994                     344 233333    3344444557999998765543221


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc----HHHHHHHHHcCCCcccCCCCcce
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                      .+      ..+..+|.+++.+.+.       +|+++..|-||.+..+......    ...+.+........+ .      
T Consensus       160 ~~------~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-~------  226 (270)
T KOG0725|consen  160 SG------VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-L------  226 (270)
T ss_pred             Cc------ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-c------
Confidence            11      1123466666554443       3899999999999887511110    112222100111111 1      


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      -.+...+|++..+..++.+... ..|+.+.+.++..
T Consensus       227 gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  227 GRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFT  262 (270)
T ss_pred             CCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEE
Confidence            1234689999998888877543 4568888887653

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.81  E-value=7.1e-09  Score=95.19  Aligned_cols=183  Identities=14%  Similarity=0.215  Sum_probs=113.3

Q ss_pred             ccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhhcC------CcccE
Q 015746           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVGG------VTFDV  155 (401)
Q Consensus        86 gtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~~~------~~~d~  155 (401)
                      -++.||+.++++|+++|++|++++|+.++...       .+.++. ..+.+++.+|   .+++.++++.      -++|+
T Consensus         4 ~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    4 SSSGIGRAIARALAEEGANVILTDRNEEKLAD-------ALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSHHHHHHHHHHHHTTEEEEEEESSHHHHHH-------HHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCChHHHHHHHHHHCCCEEEEEeCChHHHHH-------HHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            34999999999999999999999999975311       011111 1234567777   5555555433      24899


Q ss_pred             EEeCCCC------------------------ChhhHHHHH----HHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCC
Q 015746          156 VLDNNGK------------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP  207 (401)
Q Consensus       156 Vv~~a~~------------------------~~~~~~~ll----~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~  207 (401)
                      +||+++.                        |+.+...++    ..+++.  .++|++||........            
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~------------  142 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMP------------  142 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBST------------
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCc------------
Confidence            9998773                        122333333    333333  4799999876543321            


Q ss_pred             CCChHHHHHH------------HHH-hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          208 DAGHVQVEKY------------ISE-NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       208 ~~~~~~~ek~------------~~e-~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                      ....|...|.            +.. +|+++..|.||.+..+.... .....+.+......|+..         +..++|
T Consensus       143 ~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r---------~~~~~e  213 (241)
T PF13561_consen  143 GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGR---------LGTPEE  213 (241)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSS---------HBEHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCC---------CcCHHH
Confidence            1134443332            222 58999999999987652110 012233444444444432         237899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      +|.+++.++.+... .+|+++.+.+|
T Consensus       214 vA~~v~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  214 VANAVLFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHHHHHHhCccccCccCCeEEECCC
Confidence            99999999987643 56899999886

...

>PLN00015 protochlorophyllide reductase

Probab=98.80  E-value=4.1e-08  Score=93.63  Aligned_cols=105  Identities=21%  Similarity=0.189  Sum_probs=68.6

Q ss_pred             EEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC---
Q 015746           78 LIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG---  150 (401)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~---  150 (401)
                      |||    ||++.||.+++++|+++| ++|++.+|+.++...+...    +.. ....+.++..|   .+++.++++.   
T Consensus         1 lIT----Gas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~   71 (308)
T PLN00015          1 IIT----GASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKS----AGM-PKDSYTVMHLDLASLDSVRQFVDNFRR   71 (308)
T ss_pred             CEe----CCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH----hcC-CCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence            689    999999999999999999 9999999977543321110    000 01234455555   5555555432   


Q ss_pred             --CcccEEEeCCCC---------------------Chhh----HHHHHHHHHhCC--CCEEEEecccccc
Q 015746          151 --VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIY  191 (401)
Q Consensus       151 --~~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~g--v~~~v~~SS~~vy  191 (401)
                        .++|++||+||.                     |+.+    ++.++..+++.+  ..++|++||...+
T Consensus        72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence              148999999984                     2222    344566665554  4689999997654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.76  E-value=1.8e-08  Score=84.59  Aligned_cols=199  Identities=17%  Similarity=0.173  Sum_probs=122.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~-  151 (401)
                      .++.|+||    |+.-.||+.+++.|.+.|.+|+++.|.+.+...+.+.-        ..-+..+.+|..+|+.+++.. 
T Consensus         6 aG~~vlvT----gagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--------p~~I~Pi~~Dls~wea~~~~l~   73 (245)
T KOG1207|consen    6 AGVIVLVT----GAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--------PSLIIPIVGDLSAWEALFKLLV   73 (245)
T ss_pred             cceEEEee----cccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--------CcceeeeEecccHHHHHHHhhc
Confidence            46899999    99999999999999999999999999997765443211        112677888866666665543 


Q ss_pred             ---cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCC-EEEEecccccccCCCCCCCCCCC
Q 015746          152 ---TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVK-QFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       152 ---~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~-~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                         .+|.++|+||+                    |+.+..++.+.    ....+++ .+|.+||.+.-.+-     +.+.
T Consensus        74 ~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~-----~nHt  148 (245)
T KOG1207|consen   74 PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL-----DNHT  148 (245)
T ss_pred             ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc-----CCce
Confidence               36999999993                    44444444443    3333433 69999997754332     2111


Q ss_pred             CCCCCCChHH---HHH-HHHHh---CCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          204 VVKPDAGHVQ---VEK-YISEN---FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       204 ~~~~~~~~~~---~ek-~~~e~---g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                      .  +..+|.+   ..| ++.|.   .+++..+.|..|...-...+ --+.--..++...|+.         -|.-++.++
T Consensus       149 v--YcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~---------rFaEV~eVV  217 (245)
T KOG1207|consen  149 V--YCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLK---------RFAEVDEVV  217 (245)
T ss_pred             E--EeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchh---------hhhHHHHHH
Confidence            1  1113322   222 22333   46788899999876522110 0001112233333332         345789999


Q ss_pred             HHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          276 SMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       276 ~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .++..++.+... ..|..+.+.+|-
T Consensus       218 nA~lfLLSd~ssmttGstlpveGGf  242 (245)
T KOG1207|consen  218 NAVLFLLSDNSSMTTGSTLPVEGGF  242 (245)
T ss_pred             hhheeeeecCcCcccCceeeecCCc
Confidence            999988877665 456777766653

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.74  E-value=9.5e-08  Score=87.00  Aligned_cols=145  Identities=8%  Similarity=0.068  Sum_probs=89.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++++||    ||++.||+.++++|+++|++|+++.|+.++.+++...    .... ...+..+..|   ++++.++++
T Consensus         4 ~~k~~lVt----Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~----i~~~-~~~~~~~~~D~~~~~~~~~~~~   74 (227)
T PRK08862          4 KSSIILIT----SAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQ----CSAL-TDNVYSFQLKDFSQESIRHLFD   74 (227)
T ss_pred             CCeEEEEE----CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHhc-CCCeEEEEccCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987654332110    0011 1234444454   555555443


Q ss_pred             ----C-C-cccEEEeCCCC---------------------Chhh----HHHHHHHHHhCC-CCEEEEecccccccCCCCC
Q 015746          150 ----G-V-TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       150 ----~-~-~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~  197 (401)
                          . - ++|++||++|.                     |+.+    .+.++...++.+ -..+|++||...+..    
T Consensus        75 ~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~----  150 (227)
T PRK08862         75 AIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQD----  150 (227)
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCC----
Confidence                2 1 48999999972                     1111    223344444433 348999998543311    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecC
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGS  236 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~  236 (401)
                            ...+..+|.+.+.+.+.       .++++..|.||.+-.+
T Consensus       151 ------~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        151 ------LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             ------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                  11122355554333322       3899999999998776

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.65  E-value=3.1e-07  Score=80.74  Aligned_cols=206  Identities=17%  Similarity=0.212  Sum_probs=122.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+|++++|    ||.|.||+.+.++|+++|..+.++.-+.++.....+     +... ....+.++.+|   ..++++++
T Consensus         4 tGKna~vt----ggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-----L~ai~p~~~v~F~~~DVt~~~~~~~~f   74 (261)
T KOG4169|consen    4 TGKNALVT----GGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-----LQAINPSVSVIFIKCDVTNRGDLEAAF   74 (261)
T ss_pred             cCceEEEe----cCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-----HhccCCCceEEEEEeccccHHHHHHHH
Confidence            47899999    999999999999999999998888877766443211     1111 12356777777   44444444


Q ss_pred             cC----C-cccEEEeCCCC------------C----hhhHHHHHHHHHhC--CC-CEEEEecccccccCCCCCCCCCCCC
Q 015746          149 GG----V-TFDVVLDNNGK------------N----LDAVRPVADWAKSS--GV-KQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       149 ~~----~-~~d~Vv~~a~~------------~----~~~~~~ll~aa~~~--gv-~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      +.    . .+|++||.||+            |    +.++.-.+++..+.  |. .-+|..||..-..+-...|.--.+.
T Consensus        75 ~ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsK  154 (261)
T KOG4169|consen   75 DKILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASK  154 (261)
T ss_pred             HHHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcc
Confidence            33    3 37999999995            2    45566677777664  22 3689999955333322222111000


Q ss_pred             ---CCCCCChHHHHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCC----CcceeeeeeHHHHHHH
Q 015746          205 ---VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS----GMQFTNIAHVRDLSSM  277 (401)
Q Consensus       205 ---~~~~~~~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~v~D~a~~  277 (401)
                         ... ..-.+-..+.+..|+.+..++||..-..         +++.+-..+...-+.+    .-....--...+++..
T Consensus       155 aGVvgF-TRSla~~ayy~~sGV~~~avCPG~t~t~---------l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~  224 (261)
T KOG4169|consen  155 AGVVGF-TRSLADLAYYQRSGVRFNAVCPGFTRTD---------LAENIDASGGYLEYSDSIKEALERAPKQSPACCAIN  224 (261)
T ss_pred             cceeee-ehhhhhhhhHhhcCEEEEEECCCcchHH---------HHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHH
Confidence               000 0112235566777999999999875221         1222211111000000    0001112367899999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCC
Q 015746          278 LTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      ++.++|.+.+  |.+|-+..+.
T Consensus       225 ~v~aiE~~~N--Gaiw~v~~g~  244 (261)
T KOG4169|consen  225 IVNAIEYPKN--GAIWKVDSGS  244 (261)
T ss_pred             HHHHHhhccC--CcEEEEecCc
Confidence            9999999666  7899888764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.65  E-value=1.5e-07  Score=89.14  Aligned_cols=197  Identities=17%  Similarity=0.130  Sum_probs=116.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ...+.++||    |||..||..++++|+.+|.+|+...|+.+........-.   .......+.+...|   .+++.+..
T Consensus        33 ~~~~~~vVT----GansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~---~~~~~~~i~~~~lDLssl~SV~~fa  105 (314)
T KOG1208|consen   33 LSGKVALVT----GATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQ---KGKANQKIRVIQLDLSSLKSVRKFA  105 (314)
T ss_pred             CCCcEEEEE----CCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH---hcCCCCceEEEECCCCCHHHHHHHH
Confidence            345899999    999999999999999999999999999855433221100   01223456677888   33333332


Q ss_pred             cC-----CcccEEEeCCCC------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCC-CCCC
Q 015746          149 GG-----VTFDVVLDNNGK------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHV  200 (401)
Q Consensus       149 ~~-----~~~d~Vv~~a~~------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~-~~~~  200 (401)
                      +.     .+.|++|++||+                  |    +..+..+++.+++....|+|++||..- +.... ..+.
T Consensus       106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~  184 (314)
T KOG1208|consen  106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLS  184 (314)
T ss_pred             HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhcc
Confidence            22     247999999994                  3    345677888888876569999999664 21100 1111


Q ss_pred             CCCCCCCCCC-hHHHHHHHHH---------h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAG-HVQVEKYISE---------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~-~~~~ek~~~e---------~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                      ......+... .|+.+|.+..         .  |+....+.||.+....-..  ...++..+..--...+.         
T Consensus       185 ~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r--~~~~~~~l~~~l~~~~~---------  253 (314)
T KOG1208|consen  185 GEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR--VNLLLRLLAKKLSWPLT---------  253 (314)
T ss_pred             chhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec--chHHHHHHHHHHHHHhc---------
Confidence            1111001111 2555553321         1  7889999999998873322  22222222221111111         


Q ss_pred             eeHHHHHHHHHHHhcCCCc
Q 015746          269 AHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~  287 (401)
                      -..+.-|+..+.++.+++-
T Consensus       254 ks~~~ga~t~~~~a~~p~~  272 (314)
T KOG1208|consen  254 KSPEQGAATTCYAALSPEL  272 (314)
T ss_pred             cCHHHHhhheehhccCccc
Confidence            1456777777777777643

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.65  E-value=5.5e-07  Score=82.75  Aligned_cols=180  Identities=17%  Similarity=0.212  Sum_probs=117.8

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~  146 (401)
                      ...++.||||    ||++.+|+.++.+++++|..+.+.+.+.+......       ..+.. ..+..+.+|   .+++.+
T Consensus        35 ~v~g~~vLIT----Ggg~GlGr~ialefa~rg~~~vl~Din~~~~~etv-------~~~~~~g~~~~y~cdis~~eei~~  103 (300)
T KOG1201|consen   35 SVSGEIVLIT----GGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETV-------KEIRKIGEAKAYTCDISDREEIYR  103 (300)
T ss_pred             hccCCEEEEe----CCCchHHHHHHHHHHHhCCeEEEEeccccchHHHH-------HHHHhcCceeEEEecCCCHHHHHH
Confidence            3456899999    99999999999999999999989998886654321       11111 146677777   444443


Q ss_pred             hhc----CC-cccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccc-cCCCC
Q 015746          147 VVG----GV-TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIY-KPADE  196 (401)
Q Consensus       147 ~~~----~~-~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy-~~~~~  196 (401)
                      ..+    .. .+|++||+||+                    |    +..+++++..+.+.+-.++|-++|..-+ +...-
T Consensus       104 ~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl  183 (300)
T KOG1201|consen  104 LAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL  183 (300)
T ss_pred             HHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc
Confidence            322    22 37999999994                    2    3456778888888776799999986543 33222


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH----------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e----------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                      .+        +..+|+++.-+.+.          .|++.+.+.|+.+-..         +++.   ..+.      ..++
T Consensus       184 ~~--------YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg---------mf~~---~~~~------~~l~  237 (300)
T KOG1201|consen  184 AD--------YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG---------MFDG---ATPF------PTLA  237 (300)
T ss_pred             hh--------hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc---------ccCC---CCCC------cccc
Confidence            22        22366664333322          1688888888775311         1222   1111      1346


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc
Q 015746          267 NIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      +.+..+-+|+.++.++.....
T Consensus       238 P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  238 PLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             CCCCHHHHHHHHHHHHHcCCc
Confidence            678899999999999988765

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.59  E-value=3.2e-06  Score=80.09  Aligned_cols=36  Identities=25%  Similarity=0.213  Sum_probs=31.6

Q ss_pred             cccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecC
Q 015746           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVG  111 (401)
Q Consensus        72 ~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~  111 (401)
                      .++|.+|||    ||+  ..||+++++.|.++|++|++.++.
T Consensus         6 ~~gk~alIT----Ga~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          6 LTGKIAFIA----GIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCCCEEEEe----CCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            357899999    995  899999999999999999987654

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.56  E-value=1.4e-07  Score=82.14  Aligned_cols=99  Identities=11%  Similarity=0.154  Sum_probs=71.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+++||    ||+||+|. +++.|+++||+|++++|++++...+...    ...  ...+.++.+|   .+++.++++++
T Consensus         1 m~vlVt----GGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~----l~~--~~~i~~~~~Dv~d~~sv~~~i~~~   69 (177)
T PRK08309          1 MHALVI----GGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRE----STT--PESITPLPLDYHDDDALKLAIKST   69 (177)
T ss_pred             CEEEEE----CcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHH----hhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            689999    99998876 9999999999999999986543322110    000  1245555555   66666665542


Q ss_pred             -----cccEEEeCCCCChhhHHHHHHHHHhCCCC----EEEEec
Q 015746          152 -----TFDVVLDNNGKNLDAVRPVADWAKSSGVK----QFLFIS  186 (401)
Q Consensus       152 -----~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~----~~v~~S  186 (401)
                           ++|.+|+..-  ..+..++..+|++.|++    +||++=
T Consensus        70 l~~~g~id~lv~~vh--~~~~~~~~~~~~~~gv~~~~~~~~h~~  111 (177)
T PRK08309         70 IEKNGPFDLAVAWIH--SSAKDALSVVCRELDGSSETYRLFHVL  111 (177)
T ss_pred             HHHcCCCeEEEEecc--ccchhhHHHHHHHHccCCCCceEEEEe
Confidence                 4688886644  67899999999999998    898864

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.54  E-value=2e-07  Score=65.98  Aligned_cols=59  Identities=15%  Similarity=0.291  Sum_probs=38.3

Q ss_pred             HHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       309 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      .++++.|+++++...+.+..+          ....++|.+|++++|||+|+++|+++|++.++|++++-
T Consensus         1 A~e~vtG~~i~~~~~~rR~GD----------~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np   59 (62)
T PF13950_consen    1 AFEKVTGKKIPVEYAPRRPGD----------PAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP   59 (62)
T ss_dssp             HHHHHHTS---EEEE---TT------------SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred             CcHHHHCCCCCceECCCCCCc----------hhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence            367889999998776654433          37899999999999999999999999999999998763

...

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.54  E-value=6.9e-08  Score=83.11  Aligned_cols=109  Identities=25%  Similarity=0.299  Sum_probs=73.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecC--CCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVG--DENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      |.||||    ||++.||+.++++|+++| +.|+++.|+  .+....+..    .+... ..++.++.+|   .+++..++
T Consensus         1 k~~lIt----Ga~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~----~l~~~-~~~~~~~~~D~~~~~~~~~~~   71 (167)
T PF00106_consen    1 KTVLIT----GASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQ----ELKAP-GAKITFIECDLSDPESIRALI   71 (167)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHH----HHHHT-TSEEEEEESETTSHHHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccc----ccccc-ccccccccccccccccccccc
Confidence            579999    999999999999999995 577888888  222221100    11111 1356777776   55555554


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      +..     .+|++||++|.                    |+.+...+.+++...+-.++|++||.....
T Consensus        72 ~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  140 (167)
T PF00106_consen   72 EEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR  140 (167)
T ss_dssp             HHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc
Confidence            432     48999999994                    345555666666554456899999977654

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.53  E-value=9.3e-07  Score=77.78  Aligned_cols=185  Identities=21%  Similarity=0.218  Sum_probs=108.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcC----------H
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----------P  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----------~  141 (401)
                      ++.|+||    ||+..||..++++|++. |.++++.+ |+++++...     .......+++++++..|          .
T Consensus         3 pksv~It----GaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~-----l~~k~~~d~rvHii~Ldvt~deS~~~~~   73 (249)
T KOG1611|consen    3 PKSVFIT----GANRGIGLGLVKELLKDKGIEVIIATARDPEKAATE-----LALKSKSDSRVHIIQLDVTCDESIDNFV   73 (249)
T ss_pred             CccEEEe----ccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHH-----HHHhhccCCceEEEEEecccHHHHHHHH
Confidence            4679999    99999999999999987 56665554 556553110     01112235788888887          2


Q ss_pred             hhHHHhhcCCcccEEEeCCCC---------------------C----hhhHHHHHHHHHhCCCC-----------EEEEe
Q 015746          142 AEVGNVVGGVTFDVVLDNNGK---------------------N----LDAVRPVADWAKSSGVK-----------QFLFI  185 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~---------------------~----~~~~~~ll~aa~~~gv~-----------~~v~~  185 (401)
                      +++++++...+.++++++||+                     |    +..++.++-..+++..+           .+|++
T Consensus        74 ~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIini  153 (249)
T KOG1611|consen   74 QEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINI  153 (249)
T ss_pred             HHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEe
Confidence            344445444467999999994                     2    34455555555555433           69999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCccc
Q 015746          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI  258 (401)
Q Consensus       186 SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  258 (401)
                      ||.+.--    ..........+..+|-+...+.++.       ++-++.+.||+|-..-..                   
T Consensus       154 sS~~~s~----~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-------------------  210 (249)
T KOG1611|consen  154 SSSAGSI----GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-------------------  210 (249)
T ss_pred             ecccccc----CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-------------------
Confidence            9866421    1111111111222333333333332       455788999998654221                   


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEec
Q 015746          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  296 (401)
Q Consensus       259 ~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~  296 (401)
                         .   -..+.+++-+.-++..+.+-.. .+|..||..
T Consensus       211 ---~---~a~ltveeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  211 ---K---KAALTVEESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             ---C---CcccchhhhHHHHHHHHHhcCcccCcceEccC
Confidence               1   1224667777777777766554 346777654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.53  E-value=6.3e-07  Score=78.59  Aligned_cols=136  Identities=17%  Similarity=0.178  Sum_probs=88.2

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCC-CCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHHhh
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD-ENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~~~  148 (401)
                      .+|||    ||+|.||..+++.|.++|. +|+++.|.. .....     ...+.++..  ..+..+.+|   ++++.+++
T Consensus         2 tylit----GG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~-----~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~   72 (181)
T PF08659_consen    2 TYLIT----GGLGGLGQSLARWLAERGARRLILLGRSGAPSAEA-----EAAIRELESAGARVEYVQCDVTDPEAVAAAL   72 (181)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTH-----HHHHHHHHHTT-EEEEEE--TTSHHHHHHHH
T ss_pred             EEEEE----CCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHH-----HHHHHHHHhCCCceeeeccCccCHHHHHHHH
Confidence            58999    9999999999999999975 788899983 22111     012233333  245556666   77788877


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEecccc-cccCCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~-vy~~~~~~~~~E~  202 (401)
                      ...     +++.|||+++.                    -+.++.+|.++.....++.||++||+. ++|...       
T Consensus        73 ~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g-------  145 (181)
T PF08659_consen   73 AQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG-------  145 (181)
T ss_dssp             HTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT-------
T ss_pred             HHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc-------
Confidence            664     47999999994                    167788999999888889999999977 455542       


Q ss_pred             CCCCCCCChHHHHHHH--------HHhCCCeEEEecCee
Q 015746          203 DVVKPDAGHVQVEKYI--------SENFSNWASFRPQYM  233 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~--------~e~g~~~~ilRp~~v  233 (401)
                            .+.|.+....        +..|.++..|..+.+
T Consensus       146 ------q~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  146 ------QSAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             ------hHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence                  2566644422        223788888776543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.52  E-value=4.2e-07  Score=78.69  Aligned_cols=143  Identities=21%  Similarity=0.198  Sum_probs=93.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHH----H
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG----N  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~----~  146 (401)
                      +..||||    ||+..||..+++++++.|.+|++..|+.+.....+..         .+.+....+|   .+..+    .
T Consensus         5 gnTiLIT----GG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvew   71 (245)
T COG3967           5 GNTILIT----GGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEW   71 (245)
T ss_pred             CcEEEEe----CCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHH
Confidence            4689999    9999999999999999999999999999776544321         1345555555   33222    3


Q ss_pred             hhcCC-cccEEEeCCCC----------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          147 VVGGV-TFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       147 ~~~~~-~~d~Vv~~a~~----------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +.+.+ ..+++||+||+                      |+.+    +..++....+..-.-+|.+||.-.|-+-...|.
T Consensus        72 Lkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~Pv  151 (245)
T COG3967          72 LKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPV  151 (245)
T ss_pred             HHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccccc
Confidence            33333 37999999994                      3333    334445455554447999999776654332222


Q ss_pred             CCCCCCCCCCChHH---HHHHHHH----hCCCeEEEecCeeecC
Q 015746          200 VEGDVVKPDAGHVQ---VEKYISE----NFSNWASFRPQYMIGS  236 (401)
Q Consensus       200 ~E~~~~~~~~~~~~---~ek~~~e----~g~~~~ilRp~~v~G~  236 (401)
                             +..+|-+   ....+++    .++++.-+-|+.|-.+
T Consensus       152 -------YcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         152 -------YCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -------chhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                   2234433   2333444    3788888889888765

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.50  E-value=3.1e-07  Score=88.63  Aligned_cols=95  Identities=20%  Similarity=0.308  Sum_probs=76.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ||+|||.    |+ |+||+.++..|+++| ++|++.+|+.++..++...        ...++++...|   .+++.++++
T Consensus         1 m~~ilvi----Ga-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--------~~~~v~~~~vD~~d~~al~~li~   67 (389)
T COG1748           1 MMKILVI----GA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--------IGGKVEALQVDAADVDALVALIK   67 (389)
T ss_pred             CCcEEEE----CC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--------ccccceeEEecccChHHHHHHHh
Confidence            6899999    87 999999999999998 8999999998877654322        12256666665   778889999


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +.  |+|||++...+..  +++++|.++|+ ++|=+|
T Consensus        68 ~~--d~VIn~~p~~~~~--~i~ka~i~~gv-~yvDts   99 (389)
T COG1748          68 DF--DLVINAAPPFVDL--TILKACIKTGV-DYVDTS   99 (389)
T ss_pred             cC--CEEEEeCCchhhH--HHHHHHHHhCC-CEEEcc
Confidence            87  9999999975554  89999999998 577555

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.50  E-value=1.4e-06  Score=75.72  Aligned_cols=135  Identities=24%  Similarity=0.200  Sum_probs=88.1

Q ss_pred             cCeEEEEecCCCc-cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGG-HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~Gg-tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .++||||    |+ .|.||.++++++.++|+.|++..|..+....+..          +.++.....|   ++++.....
T Consensus         7 ~k~VlIt----gcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~----------~~gl~~~kLDV~~~~~V~~v~~   72 (289)
T KOG1209|consen    7 PKKVLIT----GCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI----------QFGLKPYKLDVSKPEEVVTVSG   72 (289)
T ss_pred             CCeEEEe----ecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH----------hhCCeeEEeccCChHHHHHHHH
Confidence            5789988    65 6999999999999999999999998876543221          2356666666   454444322


Q ss_pred             ------CCcccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          150 ------GVTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ------~~~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                            +-+.|.++|+||.                    |+.+    ++.+.+...++. ..+|+++|...|-+.   |+
T Consensus        73 evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpf---pf  148 (289)
T KOG1209|consen   73 EVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPF---PF  148 (289)
T ss_pred             HHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEecc---ch
Confidence                  2258999999994                    3433    444444444443 269999998887543   11


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeec
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIG  235 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G  235 (401)
                               .+-|.++|.+--            .|++++.+-+|.|-.
T Consensus       149 ---------~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  149 ---------GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             ---------hhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence                     255555554332            266666666666544

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.50  E-value=3.9e-06  Score=77.64  Aligned_cols=143  Identities=20%  Similarity=0.204  Sum_probs=98.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-  147 (401)
                      ...+-||||    |.....|+.++++|.++|+.|.+-.-.++....+....       ..++...+..|   ++++.++ 
T Consensus        27 ~~~k~VlIT----GCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~-------~s~rl~t~~LDVT~~esi~~a~   95 (322)
T KOG1610|consen   27 LSDKAVLIT----GCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET-------KSPRLRTLQLDVTKPESVKEAA   95 (322)
T ss_pred             cCCcEEEEe----cCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh-------cCCcceeEeeccCCHHHHHHHH
Confidence            345779999    99999999999999999999999886666554433211       13466666777   5554443 


Q ss_pred             ------hcCCcccEEEeCCCC---------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          148 ------VGGVTFDVVLDNNGK---------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       148 ------~~~~~~d~Vv~~a~~---------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                            +.+.+.-.|||+||+                     |    ++.+++++-..+++. .|+|++||.+-  ....
T Consensus        96 ~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G--R~~~  172 (322)
T KOG1610|consen   96 QWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG--RVAL  172 (322)
T ss_pred             HHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc--CccC
Confidence                  334457889999993                     3    445667777777775 38999999663  2111


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYM  233 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v  233 (401)
                       |..    -.+..+|+++|.+...       +|+++.+|-||.+
T Consensus       173 -p~~----g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  173 -PAL----GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             -ccc----ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence             000    1122478888876654       3999999999944

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.48  E-value=2.2e-06  Score=79.10  Aligned_cols=181  Identities=18%  Similarity=0.219  Sum_probs=115.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~~~~  150 (401)
                      .+|+||    ||+..+|..++.++..+|++|+++.|+.++..+..+.-    +.+.. ..+.+..+|   .+.....+++
T Consensus        34 ~hi~it----ggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l----~l~~~~~~v~~~S~d~~~Y~~v~~~~~~  105 (331)
T KOG1210|consen   34 RHILIT----GGSSGLGLALALECKREGADVTITARSGKKLLEAKAEL----ELLTQVEDVSYKSVDVIDYDSVSKVIEE  105 (331)
T ss_pred             ceEEEe----cCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhh----hhhhccceeeEeccccccHHHHHHHHhh
Confidence            689999    99999999999999999999999999998766544321    11110 013344444   6667777766


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----C-CCEEEEecccc----cccCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----G-VKQFLFISSAG----IYKPADE  196 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----g-v~~~v~~SS~~----vy~~~~~  196 (401)
                      .     .+|.+|+|||.                    |+.++.|++.++...    . ..+|+.+||..    +||....
T Consensus       106 l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaY  185 (331)
T KOG1210|consen  106 LRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAY  185 (331)
T ss_pred             hhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccc
Confidence            5     48999999993                    677777777655432    2 33788888844    3333221


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH----HH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc--ccCCCCcceee
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYI----SE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV--PIPGSGMQFTN  267 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~----~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  267 (401)
                                 ..+|++..-+.    +|   +++.++..-|+.+-.|+...         =.+.+|.  .+...+   -+
T Consensus       186 -----------s~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~---------En~tkP~~t~ii~g~---ss  242 (331)
T KOG1210|consen  186 -----------SPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER---------ENKTKPEETKIIEGG---SS  242 (331)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc---------ccccCchheeeecCC---CC
Confidence                       12565533322    22   47888888888887775321         1112222  111111   23


Q ss_pred             eeeHHHHHHHHHHHhcCCC
Q 015746          268 IAHVRDLSSMLTLAVENPE  286 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~  286 (401)
                      .+..+++|++++.-+.+..
T Consensus       243 ~~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  243 VIKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             CcCHHHHHHHHHhHHhhcC
Confidence            3678999999888776654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.43  E-value=1.7e-06  Score=79.71  Aligned_cols=93  Identities=19%  Similarity=0.269  Sum_probs=73.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc--CHhhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--DPAEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D~~~~~~~~~~~~  152 (401)
                      |+|||+    ||||. |+.+++.|.++||+|++.+++......+....          ...+..+  |.+++.+.+...+
T Consensus         1 m~ILvl----GGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g----------~~~v~~g~l~~~~l~~~l~~~~   65 (256)
T TIGR00715         1 MTVLLM----GGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ----------ALTVHTGALDPQELREFLKRHS   65 (256)
T ss_pred             CeEEEE----echHH-HHHHHHHHHhCCCeEEEEEccCCccccccccC----------CceEEECCCCHHHHHHHHHhcC
Confidence            689999    99999 99999999999999999999986554332210          1223222  5777889998888


Q ss_pred             ccEEEeCCCC-ChhhHHHHHHHHHhCCCCEE
Q 015746          153 FDVVLDNNGK-NLDAVRPVADWAKSSGVKQF  182 (401)
Q Consensus       153 ~d~Vv~~a~~-~~~~~~~ll~aa~~~gv~~~  182 (401)
                      +|+|||.+.. ....+.|+.++|++.|+..+
T Consensus        66 i~~VIDAtHPfA~~is~~a~~a~~~~~ipyl   96 (256)
T TIGR00715        66 IDILVDATHPFAAQITTNATAVCKELGIPYV   96 (256)
T ss_pred             CCEEEEcCCHHHHHHHHHHHHHHHHhCCcEE
Confidence            9999998775 35778999999999999733

This enzyme was found to be a monomer by gel filtration.

>PRK09620 hypothetical protein; Provisional

Probab=98.29  E-value=2.4e-06  Score=77.46  Aligned_cols=77  Identities=22%  Similarity=0.237  Sum_probs=52.6

Q ss_pred             ccCeEEEEecCCCcc----------------ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGH----------------AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt----------------G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~  136 (401)
                      .+|+||||    +|.                ||+|++|+++|+++|++|+++++.......       .+.  ....+..
T Consensus         2 ~gk~vlIT----aG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-------~~~--~~~~~~~   68 (229)
T PRK09620          2 KGKKVLIT----SGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-------DIN--NQLELHP   68 (229)
T ss_pred             CCCEEEEe----CCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-------ccC--CceeEEE
Confidence            46899999    775                999999999999999999998864321110       000  0012233


Q ss_pred             EEcC---HhhHHHhhcCCcccEEEeCCCC
Q 015746          137 VWGD---PAEVGNVVGGVTFDVVLDNNGK  162 (401)
Q Consensus       137 ~~~D---~~~~~~~~~~~~~d~Vv~~a~~  162 (401)
                      +.++   .+.+.+++...++|+|||+|++
T Consensus        69 V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         69 FEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             EecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            4453   4556667765568999999985

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.26  E-value=7.6e-06  Score=77.90  Aligned_cols=155  Identities=19%  Similarity=0.176  Sum_probs=97.3

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEE-EcCHhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~~~~~~~  147 (401)
                      ..+|+||.|+    |+.|.||+.++..|..++  ++++.+++.......+      .+.+... ...+. ..|+.++.+.
T Consensus         5 ~~~~~KI~Ii----GaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~------Dl~~~~~-~~~v~~~td~~~~~~~   73 (321)
T PTZ00325          5 ALKMFKVAVL----GAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA------DLSHIDT-PAKVTGYADGELWEKA   73 (321)
T ss_pred             CCCCCEEEEE----CCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc------chhhcCc-CceEEEecCCCchHHH
Confidence            4467899999    999999999999999665  5899999832221111      1111111 22232 3345666778


Q ss_pred             hcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCC--CCCCCCCCCCC---
Q 015746          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPD---  208 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~--~~~E~~~~~~~---  208 (401)
                      ++++  |+||+++|.              |+..++++++++++.+++++|+++|..+..-....  .+.+....++.   
T Consensus        74 l~ga--DvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~vi  151 (321)
T PTZ00325         74 LRGA--DLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLF  151 (321)
T ss_pred             hCCC--CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhhee
Confidence            8887  999999994              56688999999999999999999997654321100  00111111111   


Q ss_pred             -CChHH---HHHHH-HHhCCCeEEEecCeeecCCCC
Q 015746          209 -AGHVQ---VEKYI-SENFSNWASFRPQYMIGSGNN  239 (401)
Q Consensus       209 -~~~~~---~ek~~-~e~g~~~~ilRp~~v~G~~~~  239 (401)
                       .+-..   ...++ ...++....++ ++|+|.+.+
T Consensus       152 G~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        152 GVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             echhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence             01111   22223 33477777777 899998776

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.26  E-value=6.2e-06  Score=75.90  Aligned_cols=148  Identities=18%  Similarity=0.163  Sum_probs=84.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc--ccCCCCCCCcccchhc-CCCeEEEcC----HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVS-AGGKTVWGD----PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~D----~~~~  144 (401)
                      ..++.||||    ||++.||..+++.|+++|+.|+++.|..+..  +.....     ..... ..+.+...|    .+++
T Consensus         3 ~~~~~ilIT----Gas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Dvs~~~~~v   73 (251)
T COG1028           3 LSGKVALVT----GASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAA-----IKEAGGGRAAAVAADVSDDEESV   73 (251)
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHH-----HHhcCCCcEEEEEecCCCCHHHH
Confidence            356899999    9999999999999999999999888876541  111100     00000 134444445    3334


Q ss_pred             HHhhcC----C-cccEEEeCCCC---------------------ChhhHHHHHHHHHhCC-CCEEEEecccccccCCCCC
Q 015746          145 GNVVGG----V-TFDVVLDNNGK---------------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       145 ~~~~~~----~-~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~  197 (401)
                      ..+++.    . ++|++||+||.                     |+.+...+.+++...- .+++|++||.... .....
T Consensus        74 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~  152 (251)
T COG1028          74 EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG  152 (251)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC
Confidence            333322    1 37999999994                     2333333333221110 1189999998765 32211


Q ss_pred             CCCCCCCCCCCCChHHHHHHH-------HHhCCCeEEEecCeeec
Q 015746          198 PHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIG  235 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~-------~e~g~~~~ilRp~~v~G  235 (401)
                            ...+..+|.+..-+.       ...|+.++.+.||.+-.
T Consensus       153 ------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t  191 (251)
T COG1028         153 ------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDT  191 (251)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCC
Confidence                  111222444432222       12378999999995543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.21  E-value=5.8e-06  Score=76.41  Aligned_cols=142  Identities=16%  Similarity=0.140  Sum_probs=96.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-------HhhHHHh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-------PAEVGNV  147 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-------~~~~~~~  147 (401)
                      .=..||    |||..||+..+++|+++|.+|+.++|+.++.+.+.+.    ..+-....++++..|       .+.+.+.
T Consensus        50 ~WAVVT----GaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kE----I~~~~~vev~~i~~Dft~~~~~ye~i~~~  121 (312)
T KOG1014|consen   50 SWAVVT----GATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKE----IEEKYKVEVRIIAIDFTKGDEVYEKLLEK  121 (312)
T ss_pred             CEEEEE----CCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence            558899    9999999999999999999999999999988765432    122222234555555       4456677


Q ss_pred             hcCCcccEEEeCCCC----------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          148 VGGVTFDVVLDNNGK----------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +.+..+.++|||+|.                      |.    ..++-++.-+.+.+-.-+|++||.+--.+.       
T Consensus       122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~-------  194 (312)
T KOG1014|consen  122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPT-------  194 (312)
T ss_pred             hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccC-------
Confidence            777778899999993                      22    234455555555555569999986533221       


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecC
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGS  236 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~  236 (401)
                           |..+.|.+.|...+            .|+.+-.+-|..|-++
T Consensus       195 -----p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk  236 (312)
T KOG1014|consen  195 -----PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK  236 (312)
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence                 22367777664222            2777777777777665

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.17  E-value=2e-05  Score=92.60  Aligned_cols=147  Identities=18%  Similarity=0.217  Sum_probs=95.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCc-----------ccCCC--------C-----C-----
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENS-----------DKMKK--------P-----P-----  122 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~-----------~~~~~--------~-----~-----  122 (401)
                      +++.+|||    ||++.||..++++|+++ |++|++++|+....           ..++.        .     +     
T Consensus      1996 ~g~vvLVT----GGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813      1996 SDDVFLVT----GGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence            46799999    99999999999999998 69999999983100           00000        0     0     


Q ss_pred             -C----------Ccccchhc--CCCeEEEcC---HhhHHHhhcCC----cccEEEeCCCC--------------------
Q 015746          123 -F----------NRFNEIVS--AGGKTVWGD---PAEVGNVVGGV----TFDVVLDNNGK--------------------  162 (401)
Q Consensus       123 -~----------~~~~~l~~--~~~~~~~~D---~~~~~~~~~~~----~~d~Vv~~a~~--------------------  162 (401)
                       .          ..+..+..  ..+.++.+|   .+++.+++...    ++|.|||+||.                    
T Consensus      2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence             0          00111111  235566666   55555544332    58999999994                    


Q ss_pred             ChhhHHHHHHHHHhCCCCEEEEeccccc-ccCCCCCCCCCCCCCCCCCChHHHHHHHH-----H----h-CCCeEEEecC
Q 015746          163 NLDAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS-----E----N-FSNWASFRPQ  231 (401)
Q Consensus       163 ~~~~~~~ll~aa~~~gv~~~v~~SS~~v-y~~~~~~~~~E~~~~~~~~~~~~~ek~~~-----e----~-g~~~~ilRp~  231 (401)
                      |+.++.++++++.....++||++||... ||...             ..-|++.|...     .    . ++++..|.+|
T Consensus      2152 nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~g-------------qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG 2218 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAENIKLLALFSSAAGFYGNTG-------------QSDYAMSNDILNKAALQLKALNPSAKVMSFNWG 2218 (2582)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEechhhcCCCCC-------------cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECC
Confidence            5888999999998777778999999764 44321             14455544221     1    1 5678889998


Q ss_pred             eeecC
Q 015746          232 YMIGS  236 (401)
Q Consensus       232 ~v~G~  236 (401)
                      .+-+.
T Consensus      2219 ~wdtg 2223 (2582)
T TIGR02813      2219 PWDGG 2223 (2582)
T ss_pred             eecCC
Confidence            87664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.09  E-value=1e-05  Score=73.56  Aligned_cols=64  Identities=19%  Similarity=0.227  Sum_probs=43.8

Q ss_pred             CccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHHhhcCCcccEEEeC
Q 015746           85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNVVGGVTFDVVLDN  159 (401)
Q Consensus        85 GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~~~~~~~~d~Vv~~  159 (401)
                      .+|||+|++|+++|+++||+|+++.|...... .           ...+++++..+     .+.+.+.+.+  +|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~-----------~~~~v~~i~v~s~~~m~~~l~~~~~~--~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-E-----------PHPNLSIIEIENVDDLLETLEPLVKD--HDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC-C-----------CCCCeEEEEEecHHHHHHHHHHHhcC--CCEEEeC
Confidence            56899999999999999999999987642110 0           01244554443     2344455554  5999999


Q ss_pred             CCC
Q 015746          160 NGK  162 (401)
Q Consensus       160 a~~  162 (401)
                      ||.
T Consensus        89 AAv   91 (229)
T PRK06732         89 MAV   91 (229)
T ss_pred             Ccc
Confidence            995

>PLN00106 malate dehydrogenase

Probab=97.89  E-value=9.7e-05  Score=70.46  Aligned_cols=102  Identities=16%  Similarity=0.185  Sum_probs=75.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcC--CCeEEE-cCHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVW-GDPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~--~~~~~~-~D~~~~~~~~  148 (401)
                      ..||.||    |++|.||..++..|..++.  +++.++........         .++.+.  ...+.. .+.+++.+.+
T Consensus        18 ~~KV~Ii----GaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a---------~Dl~~~~~~~~i~~~~~~~d~~~~l   84 (323)
T PLN00106         18 GFKVAVL----GAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA---------ADVSHINTPAQVRGFLGDDQLGDAL   84 (323)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE---------chhhhCCcCceEEEEeCCCCHHHHc
Confidence            3699999    9999999999999997764  79999887622211         111111  112211 2455677888


Q ss_pred             cCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEeccccc
Q 015746          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGI  190 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~v  190 (401)
                      .++  |+|||+||.              |...++++++.+++.+.+.+|+++|.=+
T Consensus        85 ~~a--DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv  138 (323)
T PLN00106         85 KGA--DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV  138 (323)
T ss_pred             CCC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            887  999999994              6788999999999999999999888444

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.88  E-value=2.4e-05  Score=77.06  Aligned_cols=93  Identities=26%  Similarity=0.438  Sum_probs=68.0

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCC-C-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSG-H-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+|.    || |++|+.+++.|++++ + +|++.+|+.++...+..       .+...++..+..|   .+++.++++++
T Consensus         1 Ilvl----G~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~-------~~~~~~~~~~~~d~~~~~~l~~~~~~~   68 (386)
T PF03435_consen    1 ILVL----GA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAE-------KLLGDRVEAVQVDVNDPESLAELLRGC   68 (386)
T ss_dssp             EEEE-------SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHTTS
T ss_pred             CEEE----cC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHh-------hccccceeEEEEecCCHHHHHHHHhcC
Confidence            7899    99 999999999999996 4 89999999977554321       1122466666666   67788999987


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                        |+|||+++..  ....++++|.+.|+ ++|=+|
T Consensus        69 --dvVin~~gp~--~~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   69 --DVVINCAGPF--FGEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             --SEEEE-SSGG--GHHHHHHHHHHHT--EEEESS
T ss_pred             --CEEEECCccc--hhHHHHHHHHHhCC-Ceeccc
Confidence              9999999865  67789999999998 677643

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06720 hypothetical protein; Provisional

Probab=97.87  E-value=2.1e-05  Score=68.06  Aligned_cols=79  Identities=23%  Similarity=0.298  Sum_probs=53.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      +++.++||    ||+|.||+.+++.|+++|++|++++|+.+......       .++.  .....++..|   .+++.++
T Consensus        15 ~gk~~lVT----Ga~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~v~~~   83 (169)
T PRK06720         15 AGKVAIVT----GGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV-------EEITNLGGEALFVSYDMEKQGDWQRV   83 (169)
T ss_pred             CCCEEEEe----cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            46789999    99999999999999999999999998765332110       1111  1123455566   4444443


Q ss_pred             hc----CC-cccEEEeCCCC
Q 015746          148 VG----GV-TFDVVLDNNGK  162 (401)
Q Consensus       148 ~~----~~-~~d~Vv~~a~~  162 (401)
                      ++    .. ++|++||++|.
T Consensus        84 v~~~~~~~G~iDilVnnAG~  103 (169)
T PRK06720         84 ISITLNAFSRIDMLFQNAGL  103 (169)
T ss_pred             HHHHHHHcCCCCEEEECCCc
Confidence            32    22 47999999883

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.73  E-value=0.00024  Score=59.97  Aligned_cols=189  Identities=13%  Similarity=0.174  Sum_probs=112.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +-..|||    ||...+|...+++|.++|..|..++-...+.....       +++. .++.+...|   .+++..++..
T Consensus         9 glvalvt----ggasglg~ataerlakqgasv~lldlp~skg~~va-------kelg-~~~vf~padvtsekdv~aala~   76 (260)
T KOG1199|consen    9 GLVALVT----GGASGLGKATAERLAKQGASVALLDLPQSKGADVA-------KELG-GKVVFTPADVTSEKDVRAALAK   76 (260)
T ss_pred             CeeEEee----cCcccccHHHHHHHHhcCceEEEEeCCcccchHHH-------HHhC-CceEEeccccCcHHHHHHHHHH
Confidence            4468999    99999999999999999999999998776654321       2222 355666666   5666666544


Q ss_pred             C-----cccEEEeCCCC--------------------------ChhhHHHHHHHHHh--------CCCC--EEEEecccc
Q 015746          151 V-----TFDVVLDNNGK--------------------------NLDAVRPVADWAKS--------SGVK--QFLFISSAG  189 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------------~~~~~~~ll~aa~~--------~gv~--~~v~~SS~~  189 (401)
                      .     +.|+.+||+|+                          |+.++.|+++.-..        .+-+  .+|.+-|..
T Consensus        77 ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasva  156 (260)
T KOG1199|consen   77 AKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVA  156 (260)
T ss_pred             HHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceee
Confidence            3     47999999993                          45556666553221        1111  355555655


Q ss_pred             cccCCCCCCCCCCCCCCCCCChHHHHH---------HHHH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc-CCCc
Q 015746          190 IYKPADEPPHVEGDVVKPDAGHVQVEK---------YISE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR-KRPV  256 (401)
Q Consensus       190 vy~~~~~~~~~E~~~~~~~~~~~~~ek---------~~~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~  256 (401)
                      .|......            +-|.++|         +.++   .|+++..|-||.+-.|--..  ++.-+...+. ..|.
T Consensus       157 afdgq~gq------------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss--lpekv~~fla~~ipf  222 (260)
T KOG1199|consen  157 AFDGQTGQ------------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS--LPEKVKSFLAQLIPF  222 (260)
T ss_pred             eecCccch------------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh--hhHHHHHHHHHhCCC
Confidence            55432211            2233332         2233   48889999888765552111  1111222222 2222


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~  297 (401)
                        +..      .-|..+.+..+-.+++++--. |+++-+.+
T Consensus       223 --psr------lg~p~eyahlvqaiienp~ln-gevir~dg  254 (260)
T KOG1199|consen  223 --PSR------LGHPHEYAHLVQAIIENPYLN-GEVIRFDG  254 (260)
T ss_pred             --chh------cCChHHHHHHHHHHHhCcccC-CeEEEecc
Confidence              211      126778888888888887654 47777665

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.66  E-value=0.00029  Score=67.56  Aligned_cols=153  Identities=8%  Similarity=0.077  Sum_probs=83.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-------CeEEEEecCCCCcccCCCCCCCcccchh---cCCCeEEEcCHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGDENSDKMKKPPFNRFNEIV---SAGGKTVWGDPAE  143 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D~~~  143 (401)
                      ..||+||    ||+|+||++++..|+..+       ++|+++++.... ++..... ..+.+..   ..++.    +..+
T Consensus         2 ~~kV~I~----GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g~~-~Dl~d~~~~~~~~~~----~~~~   71 (325)
T cd01336           2 PIRVLVT----GAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEGVV-MELQDCAFPLLKSVV----ATTD   71 (325)
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-cccccee-eehhhccccccCCce----ecCC
Confidence            3589999    999999999999999854       589999986531 1111100 0111100   01111    1345


Q ss_pred             HHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCC-CC-EEEEecccc------cccCCCCCCCCC
Q 015746          144 VGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFISSAG------IYKPADEPPHVE  201 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~g-v~-~~v~~SS~~------vy~~~~~~~~~E  201 (401)
                      +.+.++++  |+|||+||.              |+...+.+...+++.. .+ .+|.+|...      ++.....  +..
T Consensus        72 ~~~~l~~a--DiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~--~~~  147 (325)
T cd01336          72 PEEAFKDV--DVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPS--IPK  147 (325)
T ss_pred             HHHHhCCC--CEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCC--CCH
Confidence            66777776  999999994              4555677777777763 33 355555311      0000000  000


Q ss_pred             CCC--CCCCCChHHHHHHHHHhCCCeEEEecCeeecCCCCC
Q 015746          202 GDV--VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK  240 (401)
Q Consensus       202 ~~~--~~~~~~~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~  240 (401)
                      ..-  -....+.+...-+....+++...++-.+|+|.+...
T Consensus       148 ~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~s  188 (325)
T cd01336         148 ENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSST  188 (325)
T ss_pred             HHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCCC
Confidence            000  000012222333444457777777777788887654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.63  E-value=0.00034  Score=66.69  Aligned_cols=101  Identities=21%  Similarity=0.259  Sum_probs=69.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHh---CCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEc-CHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWG-DPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~-D~~~~~~~~~  149 (401)
                      |||+|+    ||+|.||++++..|..   .++++++++|++. ....      .+ ++.. .....+.+ +.+++.+.+.
T Consensus         1 ~KI~II----GAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~------al-Dl~~~~~~~~i~~~~~~d~~~~l~   68 (312)
T PRK05086          1 MKVAVL----GAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGV------AV-DLSHIPTAVKIKGFSGEDPTPALE   68 (312)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccce------eh-hhhcCCCCceEEEeCCCCHHHHcC
Confidence            799999    9999999999988854   3568888888643 2110      00 1111 11122333 2445556667


Q ss_pred             CCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ++  |+||.++|.              |...++++++++++.+.+++|.+.|.=
T Consensus        69 ~~--DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP  120 (312)
T PRK05086         69 GA--DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNP  120 (312)
T ss_pred             CC--CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence            75  999999994              456788999999999999888888733

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.59  E-value=8.7e-05  Score=69.05  Aligned_cols=97  Identities=18%  Similarity=0.253  Sum_probs=73.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEE-EcCHhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~~~~~~~~~~~~~  153 (401)
                      ..++|.    ||+||.|..++++|+.+|.+-..-.|+..+.+.+....        .+..... .++++.+++.....  
T Consensus         7 ~d~iiY----GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L--------G~~~~~~p~~~p~~~~~~~~~~--   72 (382)
T COG3268           7 YDIIIY----GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL--------GPEAAVFPLGVPAALEAMASRT--   72 (382)
T ss_pred             eeEEEE----ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc--------CccccccCCCCHHHHHHHHhcc--
Confidence            569999    99999999999999999999877889887776443211        1222222 23488999998886  


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ++|+||+|.....-..++++|.++|. ++.=++
T Consensus        73 ~VVlncvGPyt~~g~plv~aC~~~GT-dY~DiT  104 (382)
T COG3268          73 QVVLNCVGPYTRYGEPLVAACAAAGT-DYADIT  104 (382)
T ss_pred             eEEEeccccccccccHHHHHHHHhCC-Ceeecc
Confidence            99999999877777788888888887 344333

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.53  E-value=8.9e-05  Score=69.55  Aligned_cols=103  Identities=16%  Similarity=0.214  Sum_probs=75.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHh----CCCeEEEEecCCCCcccCCC-CCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLG----SGHEVTIMTVGDENSDKMKK-PPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~----~g~~V~~~~r~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      -.++|.    ||+||.|.++++++..    .|...-+..|++++....-+ .....-.++. ..+ ++.+|   ++.+.+
T Consensus         6 yDvVIy----GASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls-~~~-i~i~D~~n~~Sl~e   79 (423)
T KOG2733|consen    6 YDVVIY----GASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLS-SSV-ILIADSANEASLDE   79 (423)
T ss_pred             eeEEEE----ccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcc-cce-EEEecCCCHHHHHH
Confidence            358999    9999999999999999    68889899999977653211 0000111121 122 44555   899999


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ..+.+  .+|+||+|.....-.+++.+|.++|. +-|=+|
T Consensus        80 mak~~--~vivN~vGPyR~hGE~VVkacienG~-~~vDIS  116 (423)
T KOG2733|consen   80 MAKQA--RVIVNCVGPYRFHGEPVVKACIENGT-HHVDIS  116 (423)
T ss_pred             HHhhh--EEEEeccccceecCcHHHHHHHHcCC-ceeccC
Confidence            98887  99999999888888899999999987 455454

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.50  E-value=0.00011  Score=70.31  Aligned_cols=72  Identities=18%  Similarity=0.206  Sum_probs=52.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhC-C-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-G-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~  148 (401)
                      ...+++|+||    ||+|+||+.++++|+++ | .+++++.|+.++...+..              ++..++..++.+++
T Consensus       152 ~l~~k~VLVt----GAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~--------------el~~~~i~~l~~~l  213 (340)
T PRK14982        152 DLSKATVAVV----GATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA--------------ELGGGKILSLEEAL  213 (340)
T ss_pred             CcCCCEEEEE----ccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH--------------HhccccHHhHHHHH
Confidence            3456899999    99999999999999865 5 589999887654432111              11124545677788


Q ss_pred             cCCcccEEEeCCCC
Q 015746          149 GGVTFDVVLDNNGK  162 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~  162 (401)
                      .++  |+|||+++.
T Consensus       214 ~~a--DiVv~~ts~  225 (340)
T PRK14982        214 PEA--DIVVWVASM  225 (340)
T ss_pred             ccC--CEEEECCcC
Confidence            775  999999985

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.47  E-value=0.00078  Score=64.94  Aligned_cols=94  Identities=18%  Similarity=0.190  Sum_probs=63.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCe---EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +++|+|+    ||||++|+.+++.|.++||.   ++++.+.......+.         +  .+.+....|.+..  .+.+
T Consensus         1 ~~~V~Iv----GAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~---------~--~g~~i~v~d~~~~--~~~~   63 (334)
T PRK14874          1 GYNVAVV----GATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS---------F--KGKELKVEDLTTF--DFSG   63 (334)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee---------e--CCceeEEeeCCHH--HHcC
Confidence            5799999    99999999999999998885   477777654333221         1  1233444443321  2344


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                        +|+||.+.+  -..+..++..+.+.|+ .+|=+|+..
T Consensus        64 --vDvVf~A~g--~g~s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         64 --VDIALFSAG--GSVSKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             --CCEEEECCC--hHHHHHHHHHHHhCCC-EEEECCchh
Confidence              599999887  4466667777777787 577677643

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.46  E-value=0.00064  Score=61.66  Aligned_cols=94  Identities=21%  Similarity=0.298  Sum_probs=70.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~  150 (401)
                      |+++|.     |.|-+|+.+++.|.++||+|+++.++++.......         ......++.+|   ++.+.++ +.+
T Consensus         1 m~iiIi-----G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~---------~~~~~~~v~gd~t~~~~L~~agi~~   66 (225)
T COG0569           1 MKIIII-----GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLA---------DELDTHVVIGDATDEDVLEEAGIDD   66 (225)
T ss_pred             CEEEEE-----CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh---------hhcceEEEEecCCCHHHHHhcCCCc
Confidence            678888     78999999999999999999999999976432110         01367778887   6666666 555


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                        +|+++-..+.+.....-..-+++..|++++|-
T Consensus        67 --aD~vva~t~~d~~N~i~~~la~~~~gv~~via   98 (225)
T COG0569          67 --ADAVVAATGNDEVNSVLALLALKEFGVPRVIA   98 (225)
T ss_pred             --CCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEE
Confidence              49999998887666666666667789887663

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.40  E-value=0.0012  Score=64.46  Aligned_cols=103  Identities=15%  Similarity=0.224  Sum_probs=66.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHH-hhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGN-VVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~-~~~~  150 (401)
                      ++|||.|.    ||||++|+.+++.|+++ +++|+.+.+.......+...    +.++....+.    +..+++. .+.+
T Consensus        37 ~~~kVaIv----GATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~----~~~l~~~~~~----~~~~~~~~~~~~  104 (381)
T PLN02968         37 EKKRIFVL----GASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV----FPHLITQDLP----NLVAVKDADFSD  104 (381)
T ss_pred             cccEEEEE----CCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh----CccccCcccc----ceecCCHHHhcC
Confidence            56899999    99999999999999999 67999998865433222110    1111111111    1111121 1455


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                        .|+||.+.+.  ....+++..+ +.|. ++|-+|+..-+.+
T Consensus       105 --~DvVf~Alp~--~~s~~i~~~~-~~g~-~VIDlSs~fRl~~  141 (381)
T PLN02968        105 --VDAVFCCLPH--GTTQEIIKAL-PKDL-KIVDLSADFRLRD  141 (381)
T ss_pred             --CCEEEEcCCH--HHHHHHHHHH-hCCC-EEEEcCchhccCC
Confidence              4999998764  5777788876 4564 7999999776544

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.38  E-value=0.00024  Score=67.71  Aligned_cols=107  Identities=18%  Similarity=0.213  Sum_probs=68.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcC-------------CCeEEEcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-------------GGKTVWGD  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~D  140 (401)
                      +|+|.|+    | .|.+|..++..|+++||+|++++|+++............+..+...             ++++    
T Consensus         2 ~~~V~VI----G-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~----   72 (308)
T PRK06129          2 MGSVAII----G-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV----   72 (308)
T ss_pred             CcEEEEE----C-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE----
Confidence            4689999    5 9999999999999999999999998754332110000000001111             1121    


Q ss_pred             HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccc
Q 015746          141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (401)
Q Consensus       141 ~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy  191 (401)
                      ..++.+++.++  |+|+.+...+......++..+.+...+..++.||...+
T Consensus        73 ~~~~~~a~~~a--d~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~  121 (308)
T PRK06129         73 TDSLADAVADA--DYVQESAPENLELKRALFAELDALAPPHAILASSTSAL  121 (308)
T ss_pred             ECcHHHhhCCC--CEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence            13455566665  99999988777777777776665544456667765543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.38  E-value=0.0011  Score=58.86  Aligned_cols=176  Identities=16%  Similarity=0.161  Sum_probs=96.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc--ccCCCCCCCcccchhcCCCeEEEcC---H---hhHHH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---P---AEVGN  146 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D---~---~~~~~  146 (401)
                      +-||||    |++-.||..+++.+.+++.+.....+.....  ..++..        .........+|   .   +++.+
T Consensus         7 ~villT----GaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~--------~gd~~v~~~g~~~e~~~l~al~e   74 (253)
T KOG1204|consen    7 KVILLT----GASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVA--------YGDDFVHVVGDITEEQLLGALRE   74 (253)
T ss_pred             eEEEEe----cCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEE--------ecCCcceechHHHHHHHHHHHHh
Confidence            558899    9999999999999999987655444433222  111100        00011112222   1   23333


Q ss_pred             hhcC--CcccEEEeCCCC-----------------------ChhhHHHHHHHH----HhCC-CCEEEEecccccccCCCC
Q 015746          147 VVGG--VTFDVVLDNNGK-----------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~--~~~d~Vv~~a~~-----------------------~~~~~~~ll~aa----~~~g-v~~~v~~SS~~vy~~~~~  196 (401)
                      +.+.  -+-|.|||+||.                       |+....-+..++    ++.. .+.+|++||.+...+-. 
T Consensus        75 ~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~-  153 (253)
T KOG1204|consen   75 APRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFS-  153 (253)
T ss_pred             hhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcccc-
Confidence            3221  257999999993                       344444444443    3332 25799999977643321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHh-----------CCCeEEEecCeeecCCC-----CCCcHHH---HHHHHHcCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGN-----NKDCEEW---FFDRIVRKRPVP  257 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e~-----------g~~~~ilRp~~v~G~~~-----~~~~~~~---~~~~~~~~~~~~  257 (401)
                                 ..+.|++.|.+++.           ++.+..++||.|-...+     +..+-+.   ++..+..     
T Consensus       154 -----------~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~-----  217 (253)
T KOG1204|consen  154 -----------SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE-----  217 (253)
T ss_pred             -----------HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh-----
Confidence                       13566666655442           66788899998765421     1101111   1111111     


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPE  286 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~  286 (401)
                             .-..++..+.++.+..++++..
T Consensus       218 -------~~~ll~~~~~a~~l~~L~e~~~  239 (253)
T KOG1204|consen  218 -------SGQLLDPQVTAKVLAKLLEKGD  239 (253)
T ss_pred             -------cCCcCChhhHHHHHHHHHHhcC
Confidence                   1224567888888888887764

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.37  E-value=0.00023  Score=63.10  Aligned_cols=80  Identities=21%  Similarity=0.248  Sum_probs=55.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~~~~  148 (401)
                      ...++++|+    ||+|.+|+.+++.|++.|++|+++.|+.++...+..    .+.+.  .+..+...   |.+++.+.+
T Consensus        26 l~~~~vlVl----GgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~----~l~~~--~~~~~~~~~~~~~~~~~~~~   95 (194)
T cd01078          26 LKGKTAVVL----GGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAAD----SLRAR--FGEGVGAVETSDDAARAAAI   95 (194)
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----HHHhh--cCCcEEEeeCCCHHHHHHHH
Confidence            356899999    999999999999999999999999998755432211    00000  12223332   467777778


Q ss_pred             cCCcccEEEeCCCCC
Q 015746          149 GGVTFDVVLDNNGKN  163 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~  163 (401)
                      .++  |+||++....
T Consensus        96 ~~~--diVi~at~~g  108 (194)
T cd01078          96 KGA--DVVFAAGAAG  108 (194)
T ss_pred             hcC--CEEEECCCCC
Confidence            776  9999977643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.29  E-value=0.0023  Score=61.67  Aligned_cols=112  Identities=26%  Similarity=0.417  Sum_probs=76.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC-----------------cccchhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN-----------------RFNEIVSAG  133 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~-----------------~~~~l~~~~  133 (401)
                      ....+|+|+    | .|.+|+.+++.|...|. ++++++++.-....+..+-..                 ++.++. +.
T Consensus        22 L~~~~VlVv----G-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in-p~   95 (339)
T PRK07688         22 LREKHVLII----G-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN-SD   95 (339)
T ss_pred             hcCCcEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC-CC
Confidence            345789999    5 59999999999999998 899999875333322222111                 111111 22


Q ss_pred             C--eEEEcC--HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          134 G--KTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       134 ~--~~~~~D--~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      +  +.+..+  .+++..++.++  |+||.+.. |...-..+-++|.+.+++ +|+.+..+.||.
T Consensus        96 v~v~~~~~~~~~~~~~~~~~~~--DlVid~~D-n~~~r~~ln~~~~~~~iP-~i~~~~~g~~G~  155 (339)
T PRK07688         96 VRVEAIVQDVTAEELEELVTGV--DLIIDATD-NFETRFIVNDAAQKYGIP-WIYGACVGSYGL  155 (339)
T ss_pred             cEEEEEeccCCHHHHHHHHcCC--CEEEEcCC-CHHHHHHHHHHHHHhCCC-EEEEeeeeeeeE
Confidence            3  333333  66677788876  99999866 566666778899999975 999888777764

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.27  E-value=0.0018  Score=52.64  Aligned_cols=96  Identities=19%  Similarity=0.193  Sum_probs=56.9

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      ||.|+    ||||++|+.+++.|.++- .++..+..... ....+.... ......  ..+.+...|.+.+    .+  +
T Consensus         1 rV~Iv----GAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~-~~~~~~--~~~~~~~~~~~~~----~~--~   67 (121)
T PF01118_consen    1 RVAIV----GATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVF-PHPKGF--EDLSVEDADPEEL----SD--V   67 (121)
T ss_dssp             EEEEE----STTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTT-GGGTTT--EEEBEEETSGHHH----TT--E
T ss_pred             CEEEE----CCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhc-cccccc--cceeEeecchhHh----hc--C
Confidence            68999    999999999999999963 36555544443 222211100 000000  1222332233333    44  5


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      |+||.+.+  -.....+...+.+.|+ ++|=.|+
T Consensus        68 Dvvf~a~~--~~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   68 DVVFLALP--HGASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             SEEEE-SC--HHHHHHHHHHHHHTTS-EEEESSS
T ss_pred             CEEEecCc--hhHHHHHHHHHhhCCc-EEEeCCH
Confidence            99999976  5667778888888888 5776665

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.24  E-value=0.0031  Score=60.77  Aligned_cols=113  Identities=22%  Similarity=0.341  Sum_probs=74.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC-----------------cccchh-cC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN-----------------RFNEIV-SA  132 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~-----------------~~~~l~-~~  132 (401)
                      ...++|+|+    |+ |.+|+++++.|...|. ++++++++.-....+..+...                 ++.++. ..
T Consensus        22 L~~~~VlIi----G~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v   96 (338)
T PRK12475         22 IREKHVLIV----GA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEV   96 (338)
T ss_pred             hcCCcEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCc
Confidence            345789999    65 6699999999999997 788888876333322221111                 111111 11


Q ss_pred             CCeEEEcC--HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          133 GGKTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       133 ~~~~~~~D--~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      .++.+..|  .+.+.+++.++  |+||.+.. |...-..+-++|.+.+++ +|+.+..+.+|.
T Consensus        97 ~i~~~~~~~~~~~~~~~~~~~--DlVid~~D-~~~~r~~in~~~~~~~ip-~i~~~~~g~~G~  155 (338)
T PRK12475         97 EIVPVVTDVTVEELEELVKEV--DLIIDATD-NFDTRLLINDLSQKYNIP-WIYGGCVGSYGV  155 (338)
T ss_pred             EEEEEeccCCHHHHHHHhcCC--CEEEEcCC-CHHHHHHHHHHHHHcCCC-EEEEEecccEEE
Confidence            23344434  56778888775  99999975 455555566789999985 888887776663

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.22  E-value=0.0013  Score=64.79  Aligned_cols=74  Identities=24%  Similarity=0.324  Sum_probs=51.6

Q ss_pred             ccccCeEEEEecCCCc----------------cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC
Q 015746           71 AAEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG  134 (401)
Q Consensus        71 ~~~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~  134 (401)
                      ...+++||||    ||                +|.+|.+++++|.++|++|+++++... ..   . +         .++
T Consensus       185 ~l~gk~vlIT----gG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---~-~---------~~~  246 (399)
T PRK05579        185 DLAGKRVLIT----AGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---T-P---------AGV  246 (399)
T ss_pred             ccCCCEEEEe----CCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---C-C---------CCc
Confidence            3567899999    99                999999999999999999999987652 11   0 0         122


Q ss_pred             eEE-EcCHhhHHHhhcCC--cccEEEeCCCC
Q 015746          135 KTV-WGDPAEVGNVVGGV--TFDVVLDNNGK  162 (401)
Q Consensus       135 ~~~-~~D~~~~~~~~~~~--~~d~Vv~~a~~  162 (401)
                      ..+ ..|.+++.+.+...  ++|++||+||+
T Consensus       247 ~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav  277 (399)
T PRK05579        247 KRIDVESAQEMLDAVLAALPQADIFIMAAAV  277 (399)
T ss_pred             EEEccCCHHHHHHHHHHhcCCCCEEEEcccc
Confidence            222 12455555554321  37999999985

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.22  E-value=0.00049  Score=59.13  Aligned_cols=105  Identities=20%  Similarity=0.236  Sum_probs=65.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCc---ccchh-cCCCeE-EEcCHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEIV-SAGGKT-VWGDPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~l~-~~~~~~-~~~D~~~~~~~~  148 (401)
                      ||+|-++     |.|-+|+.+++.|+++||+|++.+|++++.+++.......   ..++. ..++-+ ..-|.+.+.+++
T Consensus         1 m~~Ig~I-----GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~   75 (163)
T PF03446_consen    1 MMKIGFI-----GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVL   75 (163)
T ss_dssp             -BEEEEE-------SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHH
T ss_pred             CCEEEEE-----chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhh
Confidence            6899999     6799999999999999999999999986654433221111   11111 112211 222455555554


Q ss_pred             cC-------CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          149 GG-------VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       149 ~~-------~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      .+       .+-+++|++........+.+.+.+.+.|+ +||-
T Consensus        76 ~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~-~~vd  117 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGV-RYVD  117 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTE-EEEE
T ss_pred             hhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccc-eeee
Confidence            44       12478888888888999999999988885 4553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.21  E-value=0.0013  Score=53.67  Aligned_cols=94  Identities=23%  Similarity=0.280  Sum_probs=59.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHh-CCCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      |||.|+    |.+|.+|+.+++.+.+ .|+++.+. +|..+.....   ....+......++.+    .++++++++.  
T Consensus         1 mrV~i~----G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~---d~g~~~~~~~~~~~v----~~~l~~~~~~--   67 (124)
T PF01113_consen    1 MRVGIV----GASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGK---DVGELAGIGPLGVPV----TDDLEELLEE--   67 (124)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTS---BCHHHCTSST-SSBE----BS-HHHHTTH--
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccc---hhhhhhCcCCccccc----chhHHHhccc--
Confidence            689999    9999999999999999 57886665 4544222110   000011111112222    2667777776  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      +|+||++.  +...+...++.|.+.|+. +|.
T Consensus        68 ~DVvIDfT--~p~~~~~~~~~~~~~g~~-~Vi   96 (124)
T PF01113_consen   68 ADVVIDFT--NPDAVYDNLEYALKHGVP-LVI   96 (124)
T ss_dssp             -SEEEEES---HHHHHHHHHHHHHHT-E-EEE
T ss_pred             CCEEEEcC--ChHHhHHHHHHHHhCCCC-EEE
Confidence            59999998  578888899999999874 553

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.14  E-value=0.0034  Score=60.96  Aligned_cols=102  Identities=22%  Similarity=0.223  Sum_probs=60.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCC--CCCcccchhc--CCCeEEEcCHhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKP--PFNRFNEIVS--AGGKTVWGDPAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~--~~~~~~~l~~--~~~~~~~~D~~~~~~~  147 (401)
                      ++++|.|+    ||||++|+.+++.|++..+ +++++.++.....+....  +......+..  ..+.+...|++.+   
T Consensus         2 ~~~~V~I~----GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---   74 (349)
T PRK08664          2 MKLKVGIL----GATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAV---   74 (349)
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHh---
Confidence            46899999    9999999999999998754 888885555333221110  0000000000  1223333344432   


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       .+  +|+|+.+.+.+  ....+++.+.+.|++ +|-.|+
T Consensus        75 -~~--~DvVf~a~p~~--~s~~~~~~~~~~G~~-vIDls~  108 (349)
T PRK08664         75 -DD--VDIVFSALPSD--VAGEVEEEFAKAGKP-VFSNAS  108 (349)
T ss_pred             -cC--CCEEEEeCChh--HHHHHHHHHHHCCCE-EEECCc
Confidence             34  59998877654  345566778788885 444444

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.09  E-value=0.0009  Score=60.14  Aligned_cols=83  Identities=18%  Similarity=0.262  Sum_probs=54.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-----eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-----EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-----~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~  148 (401)
                      .|-+|||    |++..+|..|+++|++...     .+++.+|+.++.+..-..- ..+..-....++.+..|...+..++
T Consensus         3 RKvalIT----GanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~l-k~f~p~~~i~~~yvlvD~sNm~Sv~   77 (341)
T KOG1478|consen    3 RKVALIT----GANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAAL-KAFHPKSTIEVTYVLVDVSNMQSVF   77 (341)
T ss_pred             ceEEEEe----cCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHH-HHhCCCceeEEEEEEEehhhHHHHH
Confidence            3568999    9999999999999998864     3666778887765431110 0111111235778888855544444


Q ss_pred             cCC--------cccEEEeCCC
Q 015746          149 GGV--------TFDVVLDNNG  161 (401)
Q Consensus       149 ~~~--------~~d~Vv~~a~  161 (401)
                      ...        +.|.|+-+||
T Consensus        78 ~A~~di~~rf~~ld~iylNAg   98 (341)
T KOG1478|consen   78 RASKDIKQRFQRLDYIYLNAG   98 (341)
T ss_pred             HHHHHHHHHhhhccEEEEccc
Confidence            332        3699999988

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.06  E-value=0.0095  Score=49.34  Aligned_cols=110  Identities=19%  Similarity=0.285  Sum_probs=74.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeEEE
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKTVW  138 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~~~  138 (401)
                      .++|+|.     |.|-+|+.+++.|...|. ++++++.+.-....+.........++.              .+.+++..
T Consensus         2 ~~~v~ii-----G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~   76 (135)
T PF00899_consen    2 NKRVLII-----GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEA   76 (135)
T ss_dssp             T-EEEEE-----STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEE
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeee
Confidence            4689999     688899999999999998 788888776544444433222221111              13344333


Q ss_pred             c--C--HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          139 G--D--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       139 ~--D--~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      .  +  .+.+...++++  |+||.+... ......+-+.|++.++ .||+.+..+.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~--d~vi~~~d~-~~~~~~l~~~~~~~~~-p~i~~~~~g~~G  130 (135)
T PF00899_consen   77 IPEKIDEENIEELLKDY--DIVIDCVDS-LAARLLLNEICREYGI-PFIDAGVNGFYG  130 (135)
T ss_dssp             EESHCSHHHHHHHHHTS--SEEEEESSS-HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred             eecccccccccccccCC--CEEEEecCC-HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence            2  2  57777888765  999997654 6666778889999997 599888776655

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.02  E-value=0.017  Score=51.53  Aligned_cols=79  Identities=22%  Similarity=0.338  Sum_probs=52.6

Q ss_pred             cccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcC--CCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~~  144 (401)
                      .++|++||+    |-  .--|++.|++.|.++|.++.....++. ..+       +..++..+  .-.++.+|   .+++
T Consensus         4 L~GK~~lI~----Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~-l~k-------rv~~la~~~~s~~v~~cDV~~d~~i   71 (259)
T COG0623           4 LEGKRILIM----GVANNRSIAWGIAKALAEQGAELAFTYQGER-LEK-------RVEELAEELGSDLVLPCDVTNDESI   71 (259)
T ss_pred             cCCceEEEE----EecccccHHHHHHHHHHHcCCEEEEEeccHH-HHH-------HHHHHHhhccCCeEEecCCCCHHHH
Confidence            467999999    64  457999999999999999888776662 211       11222211  12356666   5556


Q ss_pred             HHhhcCC-----cccEEEeCCCC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK  162 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~  162 (401)
                      +++++..     ++|.+||+.+.
T Consensus        72 ~~~f~~i~~~~g~lD~lVHsIaF   94 (259)
T COG0623          72 DALFATIKKKWGKLDGLVHSIAF   94 (259)
T ss_pred             HHHHHHHHHhhCcccEEEEEecc
Confidence            6665443     47999999883

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.98  E-value=0.0024  Score=64.27  Aligned_cols=90  Identities=29%  Similarity=0.382  Sum_probs=60.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ..++|+|+    |+++ +|..+++.|+++|++|++.++.....  +    .....++...++.++.+|..+  ....+  
T Consensus         4 ~~k~v~ii----G~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~--~----~~~~~~l~~~~~~~~~~~~~~--~~~~~--   68 (450)
T PRK14106          4 KGKKVLVV----GAGV-SGLALAKFLKKLGAKVILTDEKEEDQ--L----KEALEELGELGIELVLGEYPE--EFLEG--   68 (450)
T ss_pred             CCCEEEEE----CCCH-HHHHHHHHHHHCCCEEEEEeCCchHH--H----HHHHHHHHhcCCEEEeCCcch--hHhhc--
Confidence            46899999    9888 99999999999999999998865221  0    001233334467787777433  23344  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                      +|+||++++..  ....++.+|++.|+
T Consensus        69 ~d~vv~~~g~~--~~~~~~~~a~~~~i   93 (450)
T PRK14106         69 VDLVVVSPGVP--LDSPPVVQAHKKGI   93 (450)
T ss_pred             CCEEEECCCCC--CCCHHHHHHHHCCC
Confidence            59999998853  22335555555544

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.97  E-value=0.0051  Score=59.12  Aligned_cols=95  Identities=16%  Similarity=0.180  Sum_probs=59.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEE--EecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI--MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      |++|.|+    ||||++|+.+++.|.+++|.+.-  ..++.+...+.       +. +....+.+...|..+    +.+ 
T Consensus         4 ~~~IaIv----GATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~-------l~-~~~~~l~~~~~~~~~----~~~-   66 (336)
T PRK05671          4 PLDIAVV----GATGTVGEALVQILEERDFPVGTLHLLASSESAGHS-------VP-FAGKNLRVREVDSFD----FSQ-   66 (336)
T ss_pred             CCEEEEE----ccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCe-------ec-cCCcceEEeeCChHH----hcC-
Confidence            5799999    99999999999999988875433  22333222210       01 111122222222222    344 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                       +|+||-+.+.  .....++..+.+.|+ ++|=.|+..
T Consensus        67 -vD~vFla~p~--~~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         67 -VQLAFFAAGA--AVSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             -CCEEEEcCCH--HHHHHHHHHHHHCCC-eEEECchhh
Confidence             5999998873  455668888888887 477777754

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.96  E-value=0.012  Score=52.16  Aligned_cols=112  Identities=21%  Similarity=0.305  Sum_probs=73.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCc-----------------ccchhcCCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR-----------------FNEIVSAGG  134 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~-----------------~~~l~~~~~  134 (401)
                      ...+|+|+    |..| +|.++++.|...|. ++++++.+.-....+..+-+..                 +.++ .+.+
T Consensus        18 ~~s~Vlvi----G~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v   91 (198)
T cd01485          18 RSAKVLII----GAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNV   91 (198)
T ss_pred             hhCcEEEE----CCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCC
Confidence            35799999    7777 99999999999996 6888887653322222211100                 1111 1334


Q ss_pred             eEEEc--C----HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCC
Q 015746          135 KTVWG--D----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       135 ~~~~~--D----~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      ++...  +    .++....+..+  |+||.+.. +......+-+.|++.+++ ||+.++.+.||..
T Consensus        92 ~i~~~~~~~~~~~~~~~~~~~~~--dvVi~~~d-~~~~~~~ln~~c~~~~ip-~i~~~~~G~~G~v  153 (198)
T cd01485          92 KLSIVEEDSLSNDSNIEEYLQKF--TLVIATEE-NYERTAKVNDVCRKHHIP-FISCATYGLIGYA  153 (198)
T ss_pred             EEEEEecccccchhhHHHHHhCC--CEEEECCC-CHHHHHHHHHHHHHcCCC-EEEEEeecCEEEE
Confidence            33322  2    23445566654  99998744 466677788899999984 9999988877753

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=96.91  E-value=0.0018  Score=58.90  Aligned_cols=27  Identities=30%  Similarity=0.525  Sum_probs=24.2

Q ss_pred             CccccchHHHHHHHHhCCCeEEEEecC
Q 015746           85 GGHAVIGFYLAKELLGSGHEVTIMTVG  111 (401)
Q Consensus        85 GgtG~iG~~l~~~Ll~~g~~V~~~~r~  111 (401)
                      .++|.||++++++|+++|++|+++++.
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~   48 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTK   48 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcCh
Confidence            568899999999999999999998763

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.89  E-value=0.014  Score=48.79  Aligned_cols=107  Identities=21%  Similarity=0.316  Sum_probs=69.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCccc---------------chhcCCCeE--E
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFN---------------EIVSAGGKT--V  137 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~---------------~l~~~~~~~--~  137 (401)
                      +|+|+    | .|.+|..+++.|...|. ++++++.+.-....+..+.+....               .+. +.+++  +
T Consensus         1 ~Vlii----G-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~-p~v~i~~~   74 (143)
T cd01483           1 RVLLV----G-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN-PGVNVTAV   74 (143)
T ss_pred             CEEEE----C-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC-CCcEEEEE
Confidence            58999    6 59999999999999998 688888765333333222111111               111 23333  2


Q ss_pred             EcC--HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          138 WGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       138 ~~D--~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      ..+  .......+..  +|+||.+... ......+.++|++.+++ ||..++.+.+|
T Consensus        75 ~~~~~~~~~~~~~~~--~diVi~~~d~-~~~~~~l~~~~~~~~i~-~i~~~~~g~~g  127 (143)
T cd01483          75 PEGISEDNLDDFLDG--VDLVIDAIDN-IAVRRALNRACKELGIP-VIDAGGLGLGG  127 (143)
T ss_pred             eeecChhhHHHHhcC--CCEEEECCCC-HHHHHHHHHHHHHcCCC-EEEEcCCCcEE
Confidence            222  2333455665  4999998775 67777888999999974 88888766444

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.89  E-value=0.0036  Score=60.59  Aligned_cols=102  Identities=21%  Similarity=0.143  Sum_probs=62.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~~~~~~~~~~  150 (401)
                      +|++|.|+    ||||++|+.+++.|.+. +++++++.++......+..    .+..+.  +. .....+.+..  ...+
T Consensus         1 ~m~kVaIi----GAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~----~~~~~~--~~~~~~~~~~~~~--~~~~   68 (343)
T PRK00436          1 MMIKVGIV----GASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSD----VHPHLR--GLVDLVLEPLDPE--ILAG   68 (343)
T ss_pred             CCeEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHH----hCcccc--cccCceeecCCHH--HhcC
Confidence            36899999    99999999999999987 6788777764332221111    001011  11 1111122222  3344


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy  191 (401)
                        +|+||-+...  .....++..+.+.|+ ++|=.|+..=+
T Consensus        69 --vD~Vf~alP~--~~~~~~v~~a~~aG~-~VID~S~~fR~  104 (343)
T PRK00436         69 --ADVVFLALPH--GVSMDLAPQLLEAGV-KVIDLSADFRL  104 (343)
T ss_pred             --CCEEEECCCc--HHHHHHHHHHHhCCC-EEEECCcccCC
Confidence              5999987764  466677777777775 68888875433

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.88  E-value=0.0013  Score=63.71  Aligned_cols=35  Identities=26%  Similarity=0.433  Sum_probs=31.1

Q ss_pred             ccCeEEEEecCCCccccchHH--HHHHHHhCCCeEEEEecCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFY--LAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~--l~~~Ll~~g~~V~~~~r~~  112 (401)
                      .+|++|||    ||++.+|.+  +++.| ++|++|+++++..
T Consensus        40 ggK~aLVT----GaSsGIGlA~~IA~al-~~GA~Vi~v~~~~   76 (398)
T PRK13656         40 GPKKVLVI----GASSGYGLASRIAAAF-GAGADTLGVFFEK   76 (398)
T ss_pred             CCCEEEEE----CCCchHhHHHHHHHHH-HcCCeEEEEecCc
Confidence            35899999    999999999  89999 9999999988643

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.83  E-value=0.011  Score=53.78  Aligned_cols=112  Identities=15%  Similarity=0.195  Sum_probs=72.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCe-
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGK-  135 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~-  135 (401)
                      ....+|+|+     |.|.+|.++++.|...|. ++++++.+.-....+..+......++.              .+.++ 
T Consensus        19 L~~~~Vliv-----G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i   93 (228)
T cd00757          19 LKNARVLVV-----GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEI   93 (228)
T ss_pred             HhCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEE
Confidence            345799999     588899999999999997 677777655333323222111111111              12233 


Q ss_pred             -EEEcC--HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          136 -TVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       136 -~~~~D--~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                       .+..+  .+++.+.+.++  |+||.+.. +...-..+-++|++.++ .+|+.+..+.+|
T Consensus        94 ~~~~~~i~~~~~~~~~~~~--DvVi~~~d-~~~~r~~l~~~~~~~~i-p~i~~g~~g~~g  149 (228)
T cd00757          94 EAYNERLDAENAEELIAGY--DLVLDCTD-NFATRYLINDACVKLGK-PLVSGAVLGFEG  149 (228)
T ss_pred             EEecceeCHHHHHHHHhCC--CEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence             22222  56677777775  99999876 45666678888999997 488887666554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.82  E-value=0.0032  Score=60.24  Aligned_cols=167  Identities=9%  Similarity=0.075  Sum_probs=93.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCCCC--cccCCCCCCCcccchh---cCCCeEEEcCH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDEN--SDKMKKPPFNRFNEIV---SAGGKTVWGDP  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~l~---~~~~~~~~~D~  141 (401)
                      .+||.|+    |++|.||..++..|+..|.       +++.++..+..  ......    .+.+..   ..++.+..   
T Consensus         2 p~KV~Ii----Ga~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~----Dl~~~~~~~~~~~~i~~---   70 (322)
T cd01338           2 PVRVAVT----GAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAM----ELEDCAFPLLAEIVITD---   70 (322)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeeh----hhhhccccccCceEEec---
Confidence            4699999    9999999999999998875       78888885432  322111    111111   01233322   


Q ss_pred             hhHHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-C-EEEEecccc---cccCCCCCC-CCC
Q 015746          142 AEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-K-QFLFISSAG---IYKPADEPP-HVE  201 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv-~-~~v~~SS~~---vy~~~~~~~-~~E  201 (401)
                       +..+.+.++  |+||.+||.              |....+.+...+++.+. . .+|.+|-..   +|--....+ ++.
T Consensus        71 -~~~~~~~da--DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~  147 (322)
T cd01338          71 -DPNVAFKDA--DWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPP  147 (322)
T ss_pred             -CcHHHhCCC--CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCCh
Confidence             223556676  999999994              45667788888877763 4 455555311   000000000 111


Q ss_pred             CCCCCCCCChHHHHH----HHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcc
Q 015746          202 GDVVKPDAGHVQVEK----YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek----~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  257 (401)
                      ....  ..++...++    +.+..+++...+|..+|||++.. ..+..+......|.++.
T Consensus       148 ~~Vi--G~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~  204 (322)
T cd01338         148 DNFT--AMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAA  204 (322)
T ss_pred             HheE--EehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHH
Confidence            1100  013333333    33335889899998899999854 34444444445555553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.81  E-value=0.0041  Score=54.48  Aligned_cols=61  Identities=20%  Similarity=0.258  Sum_probs=38.5

Q ss_pred             ccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-H----hhHHHhhcCCcccEEEeCC
Q 015746           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-P----AEVGNVVGGVTFDVVLDNN  160 (401)
Q Consensus        86 gtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~----~~~~~~~~~~~~d~Vv~~a  160 (401)
                      .||..|..|++++..+|++|+.+..... ...             ..++..+... .    +.+.+.+..+  |++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~-------------p~~~~~i~v~sa~em~~~~~~~~~~~--Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LPP-------------PPGVKVIRVESAEEMLEAVKELLPSA--DIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGGGG--SEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc-------------cccceEEEecchhhhhhhhccccCcc--eeEEEec
Confidence            4799999999999999999999988742 110             1266677665 3    3344444444  9999999


Q ss_pred             CC
Q 015746          161 GK  162 (401)
Q Consensus       161 ~~  162 (401)
                      ++
T Consensus        91 AV   92 (185)
T PF04127_consen   91 AV   92 (185)
T ss_dssp             B-
T ss_pred             ch
Confidence            95

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.80  E-value=0.0094  Score=56.82  Aligned_cols=103  Identities=20%  Similarity=0.313  Sum_probs=61.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCC--CeEEEcCHhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAG--GKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~D~~~~~~~~~~  150 (401)
                      |||.|+    |++|++|..++..|+..|+  +|++++|.. +.+++......-.+.+...+  ..+...  .+.. .+.+
T Consensus         1 ~kI~Ii----GatG~vG~~~a~~l~~~g~~~~v~lvd~~~-~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d~~-~l~~   72 (309)
T cd05294           1 MKVSII----GASGRVGSATALLLAKEDVVKEINLISRPK-SLEKLKGLRLDIYDALAAAGIDAEIKIS--SDLS-DVAG   72 (309)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEECcc-cccccccccchhhhchhccCCCcEEEEC--CCHH-HhCC
Confidence            689999    9999999999999999987  499999954 22222111100011111111  222211  1233 3677


Q ss_pred             CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEecc
Q 015746          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFISS  187 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~SS  187 (401)
                      +  |+||-++|.              |....+.+++.+.+.+.+ .+|.+++
T Consensus        73 a--DiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          73 S--DIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             C--CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            6  999999884              234466666666666443 5666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.80  E-value=0.015  Score=51.81  Aligned_cols=111  Identities=19%  Similarity=0.237  Sum_probs=73.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC---------------cccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~---------------~~~~l~~~~~~~  136 (401)
                      ...+|+|+     |.|.+|+++++.|...|. ++++++++.-....+..+...               ++.++. +.+++
T Consensus        20 ~~~~Vlvi-----G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v~i   93 (202)
T TIGR02356        20 LNSHVLII-----GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN-SDIQV   93 (202)
T ss_pred             cCCCEEEE-----CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC-CCCEE
Confidence            45789999     588999999999999996 899988875332222211100               111111 23333


Q ss_pred             EEc----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       137 ~~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      ...    +.+++.+.+.++  |+||.+.. +...-..+-+.|++.+++ ||+.+..+.+|.
T Consensus        94 ~~~~~~i~~~~~~~~~~~~--D~Vi~~~d-~~~~r~~l~~~~~~~~ip-~i~~~~~g~~G~  150 (202)
T TIGR02356        94 TALKERVTAENLELLINNV--DLVLDCTD-NFATRYLINDACVALGTP-LISAAVVGFGGQ  150 (202)
T ss_pred             EEehhcCCHHHHHHHHhCC--CEEEECCC-CHHHHHHHHHHHHHcCCC-EEEEEeccCeEE
Confidence            222    255677778775  99999864 456666677899999974 898887666653

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd00704 MDH Malate dehydrogenase

Probab=96.79  E-value=0.0093  Score=57.10  Aligned_cols=97  Identities=13%  Similarity=0.179  Sum_probs=63.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCC--CCcccCCCCCCCcccchh---cCCCeEEEcCHhh
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGD--ENSDKMKKPPFNRFNEIV---SAGGKTVWGDPAE  143 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~l~---~~~~~~~~~D~~~  143 (401)
                      ||.|+    ||+|.||+.++..|+.+|.       +++.+++..  +.......    .+.+..   ..+.. +.   .+
T Consensus         2 KV~Ii----GAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~----Dl~d~~~~~~~~~~-i~---~~   69 (323)
T cd00704           2 HVLIT----GAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVM----ELQDCAFPLLKGVV-IT---TD   69 (323)
T ss_pred             EEEEE----CCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeee----ehhhhcccccCCcE-Ee---cC
Confidence            79999    9999999999999997653       588888876  33322111    111110   01122 21   23


Q ss_pred             HHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCC-CC-EEEEec
Q 015746          144 VGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFIS  186 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~g-v~-~~v~~S  186 (401)
                      ..+.++++  |+|||+||.              |....+.+...+++.+ .+ .+|.+|
T Consensus        70 ~~~~~~~a--DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          70 PEEAFKDV--DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             hHHHhCCC--CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            45677776  999999994              5667888888888873 54 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08328 hypothetical protein; Provisional

Probab=96.75  E-value=0.019  Score=52.31  Aligned_cols=112  Identities=20%  Similarity=0.335  Sum_probs=73.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCc----------------ccchhcCCCe
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR----------------FNEIVSAGGK  135 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~----------------~~~l~~~~~~  135 (401)
                      ...+|+|+     |.|.+|.++++.|...|. ++++++.+.-....+..+-...                +.++ .+.+.
T Consensus        26 ~~~~VlIi-----G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~   99 (231)
T PRK08328         26 KKAKVAVV-----GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIK   99 (231)
T ss_pred             hCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCE
Confidence            45789999     678899999999999996 6888877664433332221100                0111 12333


Q ss_pred             EE--Ec--CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCC
Q 015746          136 TV--WG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       136 ~~--~~--D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      +.  ..  +.+++.++++++  |+||.+... ...-..+-++|++.+++ +|+.+..+.||..
T Consensus       100 v~~~~~~~~~~~~~~~l~~~--D~Vid~~d~-~~~r~~l~~~~~~~~ip-~i~g~~~g~~G~v  158 (231)
T PRK08328        100 IETFVGRLSEENIDEVLKGV--DVIVDCLDN-FETRYLLDDYAHKKGIP-LVHGAVEGTYGQV  158 (231)
T ss_pred             EEEEeccCCHHHHHHHHhcC--CEEEECCCC-HHHHHHHHHHHHHcCCC-EEEEeeccCEEEE
Confidence            32  22  255667778775  999998765 44445566789999975 9998888777653

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.74  E-value=0.02  Score=50.77  Aligned_cols=111  Identities=18%  Similarity=0.266  Sum_probs=71.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCc---------------ccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR---------------FNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~---------------~~~l~~~~~~~  136 (401)
                      ...+|||.    |+.| +|.++++.|...|. ++++++.+.-....+..+-+..               +.++ .+.+++
T Consensus        20 ~~s~VlIi----G~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i   93 (197)
T cd01492          20 RSARILLI----GLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKV   93 (197)
T ss_pred             HhCcEEEE----cCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEE
Confidence            45799999    8766 99999999999996 6888887653332222211111               1111 123332


Q ss_pred             EE--cCH-hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          137 VW--GDP-AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       137 ~~--~D~-~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      ..  ... +...+.+.++  |+||.+.. +......+-++|++.+++ ||+.++.+.||.
T Consensus        94 ~~~~~~~~~~~~~~~~~~--dvVi~~~~-~~~~~~~ln~~c~~~~ip-~i~~~~~G~~G~  149 (197)
T cd01492          94 SVDTDDISEKPEEFFSQF--DVVVATEL-SRAELVKINELCRKLGVK-FYATGVHGLFGF  149 (197)
T ss_pred             EEEecCccccHHHHHhCC--CEEEECCC-CHHHHHHHHHHHHHcCCC-EEEEEecCCEEE
Confidence            22  211 2234455654  99998754 567777788899999985 899988777764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.68  E-value=0.007  Score=58.39  Aligned_cols=91  Identities=20%  Similarity=0.259  Sum_probs=58.7

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEE---EEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVT---IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +|.|+    ||||++|+.+++.|.+++|.+.   .+.+.......+.           ..+......|.+ . ..+.+  
T Consensus         1 ~VaIv----GAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-----------~~~~~~~~~~~~-~-~~~~~--   61 (339)
T TIGR01296         1 NVAIV----GATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-----------FKGKELEVNEAK-I-ESFEG--   61 (339)
T ss_pred             CEEEE----cCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-----------eCCeeEEEEeCC-h-HHhcC--
Confidence            58999    9999999999999999888754   3445543332211           113344444433 1 23344  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +|+||.+.+.  ..+..++..+.+.|+ ++|=.|+.
T Consensus        62 ~D~v~~a~g~--~~s~~~a~~~~~~G~-~VID~ss~   94 (339)
T TIGR01296        62 IDIALFSAGG--SVSKEFAPKAAKCGA-IVIDNTSA   94 (339)
T ss_pred             CCEEEECCCH--HHHHHHHHHHHHCCC-EEEECCHH
Confidence            4999999884  456666777777787 46656653

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=96.67  E-value=0.009  Score=53.42  Aligned_cols=111  Identities=18%  Similarity=0.313  Sum_probs=78.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC-------cccchhcCCCeEEEc---C----
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-------RFNEIVSAGGKTVWG---D----  140 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~---D----  140 (401)
                      |+|-++     |-|-.|..++++|+++||+|++.+++++..+.++.....       -...+..+++.++-.   |    
T Consensus         1 M~iGmi-----GLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~   75 (300)
T COG1023           1 MQIGMI-----GLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDA   75 (300)
T ss_pred             Ccceee-----ccchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHH
Confidence            466777     799999999999999999999999988654443322211       112333444444433   2    


Q ss_pred             -HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc-cccC
Q 015746          141 -PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG-IYKP  193 (401)
Q Consensus       141 -~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~-vy~~  193 (401)
                       .+++...+..-  |+||+-.-.|+....+-...+.+.|+ +|+=+++.+ +.|.
T Consensus        76 vi~~la~~L~~G--DivIDGGNS~y~Ds~rr~~~l~~kgi-~flD~GTSGG~~G~  127 (300)
T COG1023          76 VIDDLAPLLSAG--DIVIDGGNSNYKDSLRRAKLLAEKGI-HFLDVGTSGGVWGA  127 (300)
T ss_pred             HHHHHHhhcCCC--CEEEECCccchHHHHHHHHHHHhcCC-eEEeccCCCCchhh
Confidence             46666666665  99999888889988888888989998 688877543 5543

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.66  E-value=0.051  Score=49.38  Aligned_cols=153  Identities=15%  Similarity=0.167  Sum_probs=85.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC---------------cccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~---------------~~~~l~~~~~~~  136 (401)
                      ...+|+|+     |.|.+|+++++.|...|. ++++++.+.-....+..+...               ++.++. +.+++
T Consensus        10 ~~~~VlVv-----G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~in-P~~~V   83 (231)
T cd00755          10 RNAHVAVV-----GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDIN-PECEV   83 (231)
T ss_pred             hCCCEEEE-----CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHC-CCcEE
Confidence            45789999     688899999999999996 788887665332222211110               111111 23333


Q ss_pred             EEcC----HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          137 VWGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       137 ~~~D----~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      ...+    ++.+..++.. ++|+||.+... +.....+.++|++.+++ ||...+.+-..++...-+.+-.......--.
T Consensus        84 ~~~~~~i~~~~~~~l~~~-~~D~VvdaiD~-~~~k~~L~~~c~~~~ip-~I~s~g~g~~~dp~~i~i~di~~t~~~pla~  160 (231)
T cd00755          84 DAVEEFLTPDNSEDLLGG-DPDFVVDAIDS-IRAKVALIAYCRKRKIP-VISSMGAGGKLDPTRIRVADISKTSGDPLAR  160 (231)
T ss_pred             EEeeeecCHhHHHHHhcC-CCCEEEEcCCC-HHHHHHHHHHHHHhCCC-EEEEeCCcCCCCCCeEEEccEeccccCcHHH
Confidence            3222    4566666643 37999998763 56667889999999875 7665544432222211111111111001223


Q ss_pred             HHHHHHHHhCCCeEEEecCeeecCC
Q 015746          213 QVEKYISENFSNWASFRPQYMIGSG  237 (401)
Q Consensus       213 ~~ek~~~e~g~~~~ilRp~~v~G~~  237 (401)
                      .+.+.+++.++..   ....||...
T Consensus       161 ~~R~~Lrk~~~~~---~~~~v~S~E  182 (231)
T cd00755         161 KVRKRLRKRGIFF---GVPVVYSTE  182 (231)
T ss_pred             HHHHHHHHcCCCC---CeEEEeCCC
Confidence            4566677766641   244677764

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.64  E-value=0.026  Score=51.68  Aligned_cols=112  Identities=15%  Similarity=0.182  Sum_probs=73.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeEE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKTV  137 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~~  137 (401)
                      ...+|+|+     |.|.+|+.+++.|...|. ++++++.+.-....+..+-.....++.              .+.+++.
T Consensus        23 ~~~~Vlvv-----G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~   97 (240)
T TIGR02355        23 KASRVLIV-----GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAIN   97 (240)
T ss_pred             hCCcEEEE-----CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEE
Confidence            45789999     678899999999999996 788888776444333322111101110              1233333


Q ss_pred             Ec----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          138 WG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       138 ~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      ..    +.+++.+++.++  |+||++... ......+-++|.+.+++ ||+.++.+.+|.
T Consensus        98 ~~~~~i~~~~~~~~~~~~--DlVvd~~D~-~~~r~~ln~~~~~~~ip-~v~~~~~g~~G~  153 (240)
T TIGR02355        98 PINAKLDDAELAALIAEH--DIVVDCTDN-VEVRNQLNRQCFAAKVP-LVSGAAIRMEGQ  153 (240)
T ss_pred             EEeccCCHHHHHHHhhcC--CEEEEcCCC-HHHHHHHHHHHHHcCCC-EEEEEecccEeE
Confidence            22    245677778776  999998754 55555677899999985 888776665553

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.61  E-value=0.022  Score=52.34  Aligned_cols=111  Identities=14%  Similarity=0.189  Sum_probs=71.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC---------------cccchhcCCCe
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGK  135 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~---------------~~~~l~~~~~~  135 (401)
                      ....+|+|+    |+ |.+|..+++.|...|. ++++++.+.-....+..+-..               ++.++ .+.++
T Consensus        30 L~~~~Vlii----G~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l-np~v~  103 (245)
T PRK05690         30 LKAARVLVV----GL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARI-NPHIA  103 (245)
T ss_pred             hcCCeEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHH-CCCCE
Confidence            346799999    66 9999999999999996 788887765333333221111               11111 12333


Q ss_pred             EEEcC----HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          136 TVWGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       136 ~~~~D----~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      +...+    .+.+...+.++  |+||.+.. +...-..+-++|++.++ .||+.+..+.+|
T Consensus       104 i~~~~~~i~~~~~~~~~~~~--DiVi~~~D-~~~~r~~ln~~~~~~~i-p~v~~~~~g~~G  160 (245)
T PRK05690        104 IETINARLDDDELAALIAGH--DLVLDCTD-NVATRNQLNRACFAAKK-PLVSGAAIRMEG  160 (245)
T ss_pred             EEEEeccCCHHHHHHHHhcC--CEEEecCC-CHHHHHHHHHHHHHhCC-EEEEeeeccCCc
Confidence            32222    45566777775  99999875 45555567788999987 488876655444

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.60  E-value=0.028  Score=51.64  Aligned_cols=92  Identities=16%  Similarity=0.266  Sum_probs=70.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~~~~~  149 (401)
                      ++++|||.    |||+ =|+.+++.|.++|++|++...+......             ..++.+..|   |.+++...+.
T Consensus         1 ~~~~Ilvl----gGT~-egr~la~~L~~~g~~v~~Svat~~g~~~-------------~~~~~v~~G~l~~~~~l~~~l~   62 (248)
T PRK08057          1 MMPRILLL----GGTS-EARALARALAAAGVDIVLSLAGRTGGPA-------------DLPGPVRVGGFGGAEGLAAYLR   62 (248)
T ss_pred             CCceEEEE----echH-HHHHHHHHHHhCCCeEEEEEccCCCCcc-------------cCCceEEECCCCCHHHHHHHHH
Confidence            36789999    9886 5999999999999998887766633211             113344433   6899999999


Q ss_pred             CCcccEEEeCCCC-ChhhHHHHHHHHHhCCCCEE
Q 015746          150 GVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQF  182 (401)
Q Consensus       150 ~~~~d~Vv~~a~~-~~~~~~~ll~aa~~~gv~~~  182 (401)
                      +.++++||+..=. ....+.++.++|++.|+..+
T Consensus        63 ~~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyi   96 (248)
T PRK08057         63 EEGIDLVIDATHPYAAQISANAAAACRALGIPYL   96 (248)
T ss_pred             HCCCCEEEECCCccHHHHHHHHHHHHHHhCCcEE
Confidence            8899999986543 36778999999999999733

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.58  E-value=0.0066  Score=61.05  Aligned_cols=92  Identities=23%  Similarity=0.408  Sum_probs=62.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~  150 (401)
                      |+|+|+    |+ |.+|+.+++.|.++|++|++++++++....+..          ..+++++.+|   ...+.++ +.+
T Consensus         1 m~viIi----G~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~~~l~~~~~~~   65 (453)
T PRK09496          1 MKIIIV----GA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----------RLDVRTVVGNGSSPDVLREAGAED   65 (453)
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----------hcCEEEEEeCCCCHHHHHHcCCCc
Confidence            689999    76 999999999999999999999998765432111          1367888888   4455555 444


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF  184 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~  184 (401)
                        +|.||-+...+ .....++..+++. +..++|.
T Consensus        66 --a~~vi~~~~~~-~~n~~~~~~~r~~~~~~~ii~   97 (453)
T PRK09496         66 --ADLLIAVTDSD-ETNMVACQIAKSLFGAPTTIA   97 (453)
T ss_pred             --CCEEEEecCCh-HHHHHHHHHHHHhcCCCeEEE
Confidence              48888776532 2333355566665 5544443

>PRK08223 hypothetical protein; Validated

Probab=96.57  E-value=0.029  Score=52.37  Aligned_cols=112  Identities=18%  Similarity=0.119  Sum_probs=72.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeEE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKTV  137 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~~  137 (401)
                      ...+|+|+     |.|.+|..+++.|...|. ++++++.+.-....+..+-.....++.              .+.+++.
T Consensus        26 ~~s~VlIv-----G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~  100 (287)
T PRK08223         26 RNSRVAIA-----GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIR  100 (287)
T ss_pred             hcCCEEEE-----CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEE
Confidence            45789999     678899999999999996 688888766433333222111111111              1334333


Q ss_pred             Ec----CHhhHHHhhcCCcccEEEeCCCCC-hhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          138 WG----DPAEVGNVVGGVTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       138 ~~----D~~~~~~~~~~~~~d~Vv~~a~~~-~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      ..    +.+++.+++.++  |+||++.... +..-..+-++|++.++. +|+.+..+..|
T Consensus       101 ~~~~~l~~~n~~~ll~~~--DlVvD~~D~~~~~~r~~ln~~c~~~~iP-~V~~~~~g~~g  157 (287)
T PRK08223        101 AFPEGIGKENADAFLDGV--DVYVDGLDFFEFDARRLVFAACQQRGIP-ALTAAPLGMGT  157 (287)
T ss_pred             EEecccCccCHHHHHhCC--CEEEECCCCCcHHHHHHHHHHHHHcCCC-EEEEeccCCeE
Confidence            22    266777888876  9999876542 35556667799999975 88877655433

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.57  E-value=0.051  Score=50.42  Aligned_cols=109  Identities=16%  Similarity=0.299  Sum_probs=70.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCC---------------CcccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPF---------------NRFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~---------------~~~~~l~~~~~~~  136 (401)
                      ...+|+|+     |.|.+|+++++.|...| .++++++.+.-....+..+-.               .++.++ .+.+++
T Consensus        29 ~~s~VlVv-----G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~I-NP~~~V  102 (268)
T PRK15116         29 ADAHICVV-----GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQI-NPECRV  102 (268)
T ss_pred             cCCCEEEE-----CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhH-CCCcEE
Confidence            45789999     68889999999999999 588888876533333322111               011111 123333


Q ss_pred             EEc----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccc
Q 015746          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (401)
Q Consensus       137 ~~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~v  190 (401)
                      ...    +++....++.. ++|+||.+... +..-..+.++|++.+++ ||..+.++-
T Consensus       103 ~~i~~~i~~e~~~~ll~~-~~D~VIdaiD~-~~~k~~L~~~c~~~~ip-~I~~gGag~  157 (268)
T PRK15116        103 TVVDDFITPDNVAEYMSA-GFSYVIDAIDS-VRPKAALIAYCRRNKIP-LVTTGGAGG  157 (268)
T ss_pred             EEEecccChhhHHHHhcC-CCCEEEEcCCC-HHHHHHHHHHHHHcCCC-EEEECCccc
Confidence            222    25666666642 36999998773 55666789999999985 776655443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=96.54  E-value=0.0022  Score=53.26  Aligned_cols=75  Identities=17%  Similarity=0.300  Sum_probs=53.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ..+++|+|.    |+ |.+|+.++..|.+.|.+ |+++.|+.++...+..       .+....+.++  +.+++...+..
T Consensus        10 l~~~~vlvi----Ga-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~-------~~~~~~~~~~--~~~~~~~~~~~   75 (135)
T PF01488_consen   10 LKGKRVLVI----GA-GGAARAVAAALAALGAKEITIVNRTPERAEALAE-------EFGGVNIEAI--PLEDLEEALQE   75 (135)
T ss_dssp             GTTSEEEEE----SS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHH-------HHTGCSEEEE--EGGGHCHHHHT
T ss_pred             cCCCEEEEE----CC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHH-------HcCcccccee--eHHHHHHHHhh
Confidence            457899999    65 88999999999999986 9999999876543211       1111223333  45667777777


Q ss_pred             CcccEEEeCCCC
Q 015746          151 VTFDVVLDNNGK  162 (401)
Q Consensus       151 ~~~d~Vv~~a~~  162 (401)
                      +  |+||++.+.
T Consensus        76 ~--DivI~aT~~   85 (135)
T PF01488_consen   76 A--DIVINATPS   85 (135)
T ss_dssp             E--SEEEE-SST
T ss_pred             C--CeEEEecCC
Confidence            5  999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK04148 hypothetical protein; Provisional

Probab=96.51  E-value=0.019  Score=47.22  Aligned_cols=90  Identities=19%  Similarity=0.241  Sum_probs=65.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH-hhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~-~~~~~~~~~~~  152 (401)
                      .++|+++     |.| -|..++..|.+.|++|++++.++.....           ....+++++.+|. +---++-+++ 
T Consensus        17 ~~kileI-----G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~-----------a~~~~~~~v~dDlf~p~~~~y~~a-   78 (134)
T PRK04148         17 NKKIVEL-----GIG-FYFKVAKKLKESGFDVIVIDINEKAVEK-----------AKKLGLNAFVDDLFNPNLEIYKNA-   78 (134)
T ss_pred             CCEEEEE-----Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHH-----------HHHhCCeEEECcCCCCCHHHHhcC-
Confidence            4789999     677 8999999999999999999998864322           2223677888882 2222333444 


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                       |.|+..- ...+....+++.+++.++.-+|
T Consensus        79 -~liysir-pp~el~~~~~~la~~~~~~~~i  107 (134)
T PRK04148         79 -KLIYSIR-PPRDLQPFILELAKKINVPLII  107 (134)
T ss_pred             -CEEEEeC-CCHHHHHHHHHHHHHcCCCEEE
Confidence             8877653 3478889999999999987444

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.51  E-value=0.0031  Score=60.18  Aligned_cols=105  Identities=14%  Similarity=0.140  Sum_probs=66.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc---------CCCeEEEcCHhhH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS---------AGGKTVWGDPAEV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~---------~~~~~~~~D~~~~  144 (401)
                      .++|.|+     |.|.+|..++..|+..|++|++.+++++........-...+..+..         ..+.+    ..++
T Consensus         7 i~~VaVI-----GaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~----~~~l   77 (321)
T PRK07066          7 IKTFAAI-----GSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF----VATI   77 (321)
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee----cCCH
Confidence            4789999     6799999999999999999999999875433211000000111110         11121    2346


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ++++.++  |.|+.+...+...-+.+...+.+.-.+.-|+.||.+
T Consensus        78 ~~av~~a--DlViEavpE~l~vK~~lf~~l~~~~~~~aIlaSnTS  120 (321)
T PRK07066         78 EACVADA--DFIQESAPEREALKLELHERISRAAKPDAIIASSTS  120 (321)
T ss_pred             HHHhcCC--CEEEECCcCCHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence            6777777  999999998888777777666554222335554433

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.50  E-value=0.0099  Score=58.31  Aligned_cols=74  Identities=26%  Similarity=0.395  Sum_probs=50.0

Q ss_pred             ccccCeEEEEecCCCc----------------cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC
Q 015746           71 AAEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG  134 (401)
Q Consensus        71 ~~~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~  134 (401)
                      ...+++||||    ||                +|.+|..++++|..+|++|+++.+......     +         .++
T Consensus       182 ~~~~~~vlit----~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~-----~---------~~~  243 (390)
T TIGR00521       182 DLEGKRVLIT----AGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT-----P---------PGV  243 (390)
T ss_pred             ccCCceEEEe----cCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC-----C---------CCc
Confidence            3567999999    87                478999999999999999999886653210     0         122


Q ss_pred             eEEE-cCHhhH-HHhhcCC--cccEEEeCCCC
Q 015746          135 KTVW-GDPAEV-GNVVGGV--TFDVVLDNNGK  162 (401)
Q Consensus       135 ~~~~-~D~~~~-~~~~~~~--~~d~Vv~~a~~  162 (401)
                      ..+. .+.+++ +.+++..  +.|++|++||+
T Consensus       244 ~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aav  275 (390)
T TIGR00521       244 KSIKVSTAEEMLEAALNELAKDFDIFISAAAV  275 (390)
T ss_pred             EEEEeccHHHHHHHHHHhhcccCCEEEEcccc
Confidence            2222 235555 4444221  36999999995

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.44  E-value=0.015  Score=56.36  Aligned_cols=99  Identities=19%  Similarity=0.115  Sum_probs=60.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC-CCeEEEE-ecCCCCcccCCCCCCCcccchhcC-CCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~  151 (401)
                      |+|.|+    ||||++|+.+++.|.+. +++++.+ ++.......+..    .+..+... ...+...|   ..++..+ 
T Consensus         1 ~kVaIi----GATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~----~~~~l~~~~~~~~~~~~---~~~~~~~-   68 (346)
T TIGR01850         1 IKVAIV----GASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSE----VHPHLRGLVDLNLEPID---EEEIAED-   68 (346)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHH----hCccccccCCceeecCC---HHHhhcC-
Confidence            589999    99999999999999987 5677754 433322211110    01111100 11122122   2333333 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                       +|+||-+.+  -.....++..+.+.|. ++|=.|+..
T Consensus        69 -~DvVf~alP--~~~s~~~~~~~~~~G~-~VIDlS~~f  102 (346)
T TIGR01850        69 -ADVVFLALP--HGVSAELAPELLAAGV-KVIDLSADF  102 (346)
T ss_pred             -CCEEEECCC--chHHHHHHHHHHhCCC-EEEeCChhh
Confidence             599999876  3566777887777884 799888754

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.37  E-value=0.017  Score=58.02  Aligned_cols=89  Identities=28%  Similarity=0.433  Sum_probs=59.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-HhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~~~~  151 (401)
                      .+++|+||    |++| +|..+++.|+++|++|++.++.......       ....+...++.+..+. ..++   +.. 
T Consensus         4 ~~k~v~v~----G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~-------~~~~l~~~g~~~~~~~~~~~~---~~~-   67 (447)
T PRK02472          4 QNKKVLVL----GLAK-SGYAAAKLLHKLGANVTVNDGKPFSENP-------EAQELLEEGIKVICGSHPLEL---LDE-   67 (447)
T ss_pred             CCCEEEEE----eeCH-HHHHHHHHHHHCCCEEEEEcCCCccchh-------HHHHHHhcCCEEEeCCCCHHH---hcC-
Confidence            35789999    9988 9999999999999999999876532211       1123344466666553 3332   222 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                      .+|.||..+|+...  ..++++|++.|+
T Consensus        68 ~~d~vV~s~gi~~~--~~~~~~a~~~~i   93 (447)
T PRK02472         68 DFDLMVKNPGIPYT--NPMVEKALEKGI   93 (447)
T ss_pred             cCCEEEECCCCCCC--CHHHHHHHHCCC
Confidence            25999999986543  346666666665

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.34  E-value=0.032  Score=53.88  Aligned_cols=95  Identities=18%  Similarity=0.178  Sum_probs=57.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe---EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ..++|.|+    ||||++|+.+++.|.+++|.   +..+.........+        ..   .+......+.+ . ..+.
T Consensus         6 ~~~kVaVv----GAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~--------~~---~~~~~~v~~~~-~-~~~~   68 (344)
T PLN02383          6 NGPSVAIV----GVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKV--------TF---EGRDYTVEELT-E-DSFD   68 (344)
T ss_pred             CCCeEEEE----cCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCee--------ee---cCceeEEEeCC-H-HHHc
Confidence            35799999    99999999999999998884   33333222111111        11   12222222211 1 2334


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      +  +|+||.+++.  .....++..+.+.|+ ++|=.|+..
T Consensus        69 ~--~D~vf~a~p~--~~s~~~~~~~~~~g~-~VIDlS~~f  103 (344)
T PLN02383         69 G--VDIALFSAGG--SISKKFGPIAVDKGA-VVVDNSSAF  103 (344)
T ss_pred             C--CCEEEECCCc--HHHHHHHHHHHhCCC-EEEECCchh
Confidence            5  4999988874  355666666666776 577777744

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.33  E-value=0.037  Score=51.26  Aligned_cols=86  Identities=16%  Similarity=0.147  Sum_probs=58.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      +++|.|+    |++|.+|+.+++.+.+. +.+++++. ++.+.....           ...++.    ..+++++++.+ 
T Consensus         1 ~mkV~Ii----G~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------~~~~i~----~~~dl~~ll~~-   60 (257)
T PRK00048          1 MIKVAVA----GASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------GALGVA----ITDDLEAVLAD-   60 (257)
T ss_pred             CcEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------CCCCcc----ccCCHHHhccC-
Confidence            4799999    99999999999998864 67877754 444322211           111221    23556666654 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                       +|+||++..  ......++..|.++|+ ++|
T Consensus        61 -~DvVid~t~--p~~~~~~~~~al~~G~-~vv   88 (257)
T PRK00048         61 -ADVLIDFTT--PEATLENLEFALEHGK-PLV   88 (257)
T ss_pred             -CCEEEECCC--HHHHHHHHHHHHHcCC-CEE
Confidence             699999985  3445778888889997 466

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.33  E-value=0.045  Score=53.24  Aligned_cols=113  Identities=17%  Similarity=0.181  Sum_probs=73.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT  136 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~  136 (401)
                      ....+|||+    | .|.+|+.+++.|...|. ++++++.+.-....+..+-.....++.              .+.+++
T Consensus        26 L~~~~Vliv----G-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v  100 (355)
T PRK05597         26 LFDAKVAVI----G-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKV  100 (355)
T ss_pred             HhCCeEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEE
Confidence            345799999    5 58899999999999996 688888776433333322111111111              133333


Q ss_pred             EEc----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       137 ~~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      ...    +.++....+.++  |+||.+... +..-..+-++|.+.+++ ||+.+..+.+|.
T Consensus       101 ~~~~~~i~~~~~~~~~~~~--DvVvd~~d~-~~~r~~~n~~c~~~~ip-~v~~~~~g~~g~  157 (355)
T PRK05597        101 TVSVRRLTWSNALDELRDA--DVILDGSDN-FDTRHLASWAAARLGIP-HVWASILGFDAQ  157 (355)
T ss_pred             EEEEeecCHHHHHHHHhCC--CEEEECCCC-HHHHHHHHHHHHHcCCC-EEEEEEecCeEE
Confidence            222    255666778775  999998763 44444566789999985 999887666653

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.22  E-value=0.0039  Score=52.16  Aligned_cols=98  Identities=17%  Similarity=0.252  Sum_probs=63.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcC---CCeEEEcCHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSA---GGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~D~~~~~~~~~  149 (401)
                      |||.|+    |++|.+|++++..|...+.  +++.+++..+.......    .+.+....   ...+..+    ..+.++
T Consensus         1 ~KV~Ii----Ga~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~----Dl~~~~~~~~~~~~i~~~----~~~~~~   68 (141)
T PF00056_consen    1 MKVAII----GAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEAL----DLSHASAPLPSPVRITSG----DYEALK   68 (141)
T ss_dssp             SEEEEE----STTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH----HHHHHHHGSTEEEEEEES----SGGGGT
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeeh----hhhhhhhhcccccccccc----cccccc
Confidence            689999    9999999999999999964  79999998654332110    11111111   1222222    233445


Q ss_pred             CCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      ++  |+||-++|.              |....+.+.+.+.+.+.+ .|+.+|
T Consensus        69 ~a--Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   69 DA--DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             TE--SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             cc--cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            55  999999984              456677777777777644 455444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.12  E-value=0.025  Score=56.84  Aligned_cols=97  Identities=25%  Similarity=0.354  Sum_probs=64.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hhHHHh-h
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-V  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~~~~~-~  148 (401)
                      .+++|+|.    |+ |.+|+.+++.|.+.|++|++++++++....+..        . ..++.++.||.   +.+.++ +
T Consensus       230 ~~~~iiIi----G~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~--------~-~~~~~~i~gd~~~~~~L~~~~~  295 (453)
T PRK09496        230 PVKRVMIV----GG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE--------E-LPNTLVLHGDGTDQELLEEEGI  295 (453)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH--------H-CCCCeEEECCCCCHHHHHhcCC
Confidence            46899999    65 999999999999999999999988864432111        0 12577888884   444333 2


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +  +.|+||-+...+ .....+...|++.+.++++...
T Consensus       296 ~--~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~ii~~~  330 (453)
T PRK09496        296 D--EADAFIALTNDD-EANILSSLLAKRLGAKKVIALV  330 (453)
T ss_pred             c--cCCEEEECCCCc-HHHHHHHHHHHHhCCCeEEEEE
Confidence            2  358888766543 2223344566777877666543

>PLN02775 Probable dihydrodipicolinate reductase

Probab=96.11  E-value=0.069  Score=49.72  Aligned_cols=93  Identities=20%  Similarity=0.306  Sum_probs=61.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC-
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~-  151 (401)
                      ..+|+|.    |++|-+|+.+++.+.+.+.++++.. +... ...+.       -++...++.+.  .+++++.++... 
T Consensus        11 ~i~V~V~----Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~-~~~~~-------~~~~g~~v~~~--~~~dl~~~l~~~~   76 (286)
T PLN02775         11 AIPIMVN----GCTGKMGHAVAEAAVSAGLQLVPVSFTGPA-GVGVT-------VEVCGVEVRLV--GPSEREAVLSSVK   76 (286)
T ss_pred             CCeEEEE----CCCChHHHHHHHHHhcCCCEEEEEeccccc-ccccc-------ceeccceeeee--cCccHHHHHHHhh
Confidence            4699999    9999999999999999888877643 3332 11110       01111122222  245555555333 


Q ss_pred             --ccc-EEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          152 --TFD-VVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       152 --~~d-~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                        .+| ++|++.-  -..+...++.|.+.|+. +|
T Consensus        77 ~~~~~~VvIDFT~--P~a~~~~~~~~~~~g~~-~V  108 (286)
T PLN02775         77 AEYPNLIVVDYTL--PDAVNDNAELYCKNGLP-FV  108 (286)
T ss_pred             ccCCCEEEEECCC--hHHHHHHHHHHHHCCCC-EE
Confidence              589 8999875  57788889999999985 55

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.08  E-value=0.037  Score=52.66  Aligned_cols=97  Identities=24%  Similarity=0.392  Sum_probs=64.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchh---cCCCeEEEcCHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIV---SAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D~~~~~~~~~  149 (401)
                      ++|.|+    | +|.+|+.++..|+..|  ++|++++|+.++...+..    .+.+..   .....+..+|.+    .+.
T Consensus         1 ~kI~II----G-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~----dL~~~~~~~~~~~~i~~~~~~----~l~   67 (306)
T cd05291           1 RKVVII----G-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEAL----DLEDALAFLPSPVKIKAGDYS----DCK   67 (306)
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHh----hHHHHhhccCCCeEEEcCCHH----HhC
Confidence            479999    7 5999999999999999  689999998876554321    111111   112233333333    245


Q ss_pred             CCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      ++  |+||.++|.              |....+.+.+.+++.+.+ .++.+|
T Consensus        68 ~a--DIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          68 DA--DIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             CC--CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            65  999999995              455677788888877654 455555

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.07  E-value=0.058  Score=48.54  Aligned_cols=110  Identities=18%  Similarity=0.286  Sum_probs=71.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCC---------------CcccchhcCCCeEE
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPF---------------NRFNEIVSAGGKTV  137 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~  137 (401)
                      ..+|+|+     |-|.+|+|.++.|.+.|. ++++++-+.-....+..+-.               ++...+ .|..++.
T Consensus        30 ~~~V~Vv-----GiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I-nP~c~V~  103 (263)
T COG1179          30 QAHVCVV-----GIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI-NPECEVT  103 (263)
T ss_pred             hCcEEEE-----ecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh-CCCceEe
Confidence            4689999     678899999999999986 56666654422222211100               011111 1333443


Q ss_pred             EcC----HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCC
Q 015746          138 WGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       138 ~~D----~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      ..|    ++.++.++.. .+|.||++.- ++..-..|+..|++.+++   ++||.++-+..
T Consensus       104 ~~~~f~t~en~~~~~~~-~~DyvIDaiD-~v~~Kv~Li~~c~~~ki~---vIss~Gag~k~  159 (263)
T COG1179         104 AINDFITEENLEDLLSK-GFDYVIDAID-SVRAKVALIAYCRRNKIP---VISSMGAGGKL  159 (263)
T ss_pred             ehHhhhCHhHHHHHhcC-CCCEEEEchh-hhHHHHHHHHHHHHcCCC---EEeeccccCCC
Confidence            333    7888888776 6899999864 467777899999999873   45666665543

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.05  E-value=0.041  Score=52.76  Aligned_cols=99  Identities=11%  Similarity=0.113  Sum_probs=60.2

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCCCC--cccCCCCCCCcccchhcCC-CeEEEcCHhhHH
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDEN--SDKMKKPPFNRFNEIVSAG-GKTVWGDPAEVG  145 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~l~~~~-~~~~~~D~~~~~  145 (401)
                      ||.|+    |++|.||+.++..|..+|.       +++.+++.+..  ......    .+.+...+. ..++..  .+..
T Consensus         1 ~V~Ii----GaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~----Dl~d~~~~~~~~~~~~--~~~~   70 (324)
T TIGR01758         1 RVVVT----GAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVM----ELMDCAFPLLDGVVPT--HDPA   70 (324)
T ss_pred             CEEEE----CCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEe----ehhcccchhcCceecc--CChH
Confidence            68999    9999999999999997543       58888886543  221110    011110000 011111  1334


Q ss_pred             HhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCC-CC-EEEEec
Q 015746          146 NVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFIS  186 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~g-v~-~~v~~S  186 (401)
                      +.+.++  |+||++||.              |+...+.+....++.+ .+ .+|.+|
T Consensus        71 ~~~~~a--DiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        71 VAFTDV--DVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             HHhCCC--CEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            566776  999999994              4556777888887773 44 455555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.05  E-value=0.067  Score=52.75  Aligned_cols=112  Identities=16%  Similarity=0.184  Sum_probs=72.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT-  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~-  136 (401)
                      ...+|||+     |.|.+|..+++.|...|. ++++++.+.-....+..+-.....++.              .+.+++ 
T Consensus        41 ~~~~Vlvi-----G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~  115 (392)
T PRK07878         41 KNARVLVI-----GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVR  115 (392)
T ss_pred             hcCCEEEE-----CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEE
Confidence            45789999     678899999999999997 677887665333333222111111110              123433 


Q ss_pred             -EEc--CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       137 -~~~--D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                       +..  +.++..+++.++  |+||.+.. |...-..+-++|.+.+++ ||+.+..+.+|.
T Consensus       116 ~~~~~i~~~~~~~~~~~~--D~Vvd~~d-~~~~r~~ln~~~~~~~~p-~v~~~~~g~~G~  171 (392)
T PRK07878        116 LHEFRLDPSNAVELFSQY--DLILDGTD-NFATRYLVNDAAVLAGKP-YVWGSIYRFEGQ  171 (392)
T ss_pred             EEeccCChhHHHHHHhcC--CEEEECCC-CHHHHHHHHHHHHHcCCC-EEEEEeccCEEE
Confidence             222  255566778775  99999865 455444566789999975 999988777764

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.03  E-value=0.026  Score=53.13  Aligned_cols=71  Identities=15%  Similarity=0.266  Sum_probs=50.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|+    | .|.+|+.+++.|...|++|++.+|+.++...           ....+...+  +.+++.+.+.++
T Consensus       149 l~gk~v~Ii----G-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-----------~~~~g~~~~--~~~~l~~~l~~a  210 (287)
T TIGR02853       149 IHGSNVMVL----G-FGRTGMTIARTFSALGARVFVGARSSADLAR-----------ITEMGLIPF--PLNKLEEKVAEI  210 (287)
T ss_pred             CCCCEEEEE----c-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-----------HHHCCCeee--cHHHHHHHhccC
Confidence            346899999    5 5889999999999999999999998753221           111122222  345677777765


Q ss_pred             cccEEEeCCCC
Q 015746          152 TFDVVLDNNGK  162 (401)
Q Consensus       152 ~~d~Vv~~a~~  162 (401)
                        |+||++...
T Consensus       211 --DiVint~P~  219 (287)
T TIGR02853       211 --DIVINTIPA  219 (287)
T ss_pred             --CEEEECCCh
Confidence              999998754

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.97  E-value=0.04  Score=54.03  Aligned_cols=37  Identities=38%  Similarity=0.541  Sum_probs=33.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      +.+++|.|+    ||.|.+|..+++.|.++||+|++.+|+.
T Consensus        96 ~~~~~I~Ii----GG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         96 PDLRPVVIV----GGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cccceEEEE----cCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            356899999    9999999999999999999999999853

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.87  E-value=0.02  Score=62.60  Aligned_cols=95  Identities=17%  Similarity=0.095  Sum_probs=62.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCe-------------EEEEecCCCCcccCCCCCCCcccchhcCCCeEEE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHE-------------VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW  138 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~  138 (401)
                      .+++|+|+    |+ |+||+.+++.|.+. +++             |++.+++.+...++...         .++++.+.
T Consensus       568 ~~~rIlVL----GA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~---------~~~~~~v~  633 (1042)
T PLN02819        568 KSQNVLIL----GA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG---------IENAEAVQ  633 (1042)
T ss_pred             cCCcEEEE----CC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh---------cCCCceEE
Confidence            47899999    65 99999999999875 333             66677766544322110         02444444


Q ss_pred             c---CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          139 G---DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       139 ~---D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      .   |.+++.+++.+  +|+||++...  .....++.+|.++|+ +++-.|
T Consensus       634 lDv~D~e~L~~~v~~--~DaVIsalP~--~~H~~VAkaAieaGk-Hvv~ek  679 (1042)
T PLN02819        634 LDVSDSESLLKYVSQ--VDVVISLLPA--SCHAVVAKACIELKK-HLVTAS  679 (1042)
T ss_pred             eecCCHHHHHHhhcC--CCEEEECCCc--hhhHHHHHHHHHcCC-CEEECc
Confidence            4   56677777676  5999999875  335667777777775 555443

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=95.87  E-value=0.09  Score=50.87  Aligned_cols=101  Identities=13%  Similarity=0.165  Sum_probs=56.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCc-ccCCCC-CCCcccchhc--CCCeEEEcCHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENS-DKMKKP-PFNRFNEIVS--AGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~-~~~~~~-~~~~~~~l~~--~~~~~~~~D~~~~~~~~~  149 (401)
                      ++|.|+    |++|++|+++++.|.+++ .+|..+.+..... ..+... +...+..+..  ..+.+...+++    .+.
T Consensus         1 ~kVaIv----GatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~   72 (341)
T TIGR00978         1 MRVAVL----GATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPV----ASK   72 (341)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHH----Hhc
Confidence            589999    999999999999998876 5888775443222 111100 0000000100  01122222332    234


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +  +|+|+.+...+  ....+.+.+.+.|++ +|-.|+.
T Consensus        73 ~--~DvVf~a~p~~--~s~~~~~~~~~~G~~-VIDlsg~  106 (341)
T TIGR00978        73 D--VDIVFSALPSE--VAEEVEPKLAEAGKP-VFSNASN  106 (341)
T ss_pred             c--CCEEEEeCCHH--HHHHHHHHHHHCCCE-EEECChh
Confidence            4  59999988755  334455677778874 6666654

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=95.85  E-value=0.068  Score=49.14  Aligned_cols=91  Identities=20%  Similarity=0.288  Sum_probs=65.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~~~~~~~  151 (401)
                      |+|||.    |||+ =|+.|++.|.++|+ |.+.+-..-...-...         ....+.+..|   |.+++.+.+...
T Consensus         1 m~ILvl----gGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~---------~~~~~~v~~G~lg~~~~l~~~l~~~   65 (249)
T PF02571_consen    1 MKILVL----GGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKP---------ELPGLEVRVGRLGDEEGLAEFLREN   65 (249)
T ss_pred             CEEEEE----echH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhcc---------ccCCceEEECCCCCHHHHHHHHHhC
Confidence            799999    9886 59999999999998 6554433322211100         0013334433   689999999988


Q ss_pred             cccEEEeCCCC-ChhhHHHHHHHHHhCCCC
Q 015746          152 TFDVVLDNNGK-NLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       152 ~~d~Vv~~a~~-~~~~~~~ll~aa~~~gv~  180 (401)
                      ++++||+..=. ....++|+.++|++.|+.
T Consensus        66 ~i~~vIDATHPfA~~is~na~~a~~~~~ip   95 (249)
T PF02571_consen   66 GIDAVIDATHPFAAEISQNAIEACRELGIP   95 (249)
T ss_pred             CCcEEEECCCchHHHHHHHHHHHHhhcCcc
Confidence            89999986543 357789999999999987

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.85  E-value=0.09  Score=51.60  Aligned_cols=110  Identities=15%  Similarity=0.181  Sum_probs=69.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC---------------cccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~---------------~~~~l~~~~~~~  136 (401)
                      ...+|+|+    | .|.+|+++++.|...|. ++++++++.-....+..+...               ++.++. +.+++
T Consensus       134 ~~~~Vlvv----G-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v~v  207 (376)
T PRK08762        134 LEARVLLI----G-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN-PDVQV  207 (376)
T ss_pred             hcCcEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC-CCCEE
Confidence            45789999    5 57899999999999997 788888874222222211110               111111 23333


Q ss_pred             EEc----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       137 ~~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      ...    +.+.+..++.++  |+||++... ...-..+-++|++.+++ ||+.+..+.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~--D~Vv~~~d~-~~~r~~ln~~~~~~~ip-~i~~~~~g~~g  263 (376)
T PRK08762        208 EAVQERVTSDNVEALLQDV--DVVVDGADN-FPTRYLLNDACVKLGKP-LVYGAVFRFEG  263 (376)
T ss_pred             EEEeccCChHHHHHHHhCC--CEEEECCCC-HHHHHHHHHHHHHcCCC-EEEEEeccCEE
Confidence            222    245566777765  999998764 44444577789999974 88887665544

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.84  E-value=0.056  Score=43.20  Aligned_cols=89  Identities=21%  Similarity=0.295  Sum_probs=61.1

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcCCc
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGGVT  152 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~~~  152 (401)
                      |+|.     |.|-+|+.+++.|.+.+++|++++++++..           ..+...++.++.||   ++.+.++ ++  +
T Consensus         1 vvI~-----G~g~~~~~i~~~L~~~~~~vvvid~d~~~~-----------~~~~~~~~~~i~gd~~~~~~l~~a~i~--~   62 (116)
T PF02254_consen    1 VVII-----GYGRIGREIAEQLKEGGIDVVVIDRDPERV-----------EELREEGVEVIYGDATDPEVLERAGIE--K   62 (116)
T ss_dssp             EEEE-----S-SHHHHHHHHHHHHTTSEEEEEESSHHHH-----------HHHHHTTSEEEES-TTSHHHHHHTTGG--C
T ss_pred             eEEE-----cCCHHHHHHHHHHHhCCCEEEEEECCcHHH-----------HHHHhcccccccccchhhhHHhhcCcc--c
Confidence            5788     557899999999999877999999998644           33445578999999   4445554 33  3


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEE
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF  184 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~  184 (401)
                      .+.|+-+... -.....++..+++. +..+++.
T Consensus        63 a~~vv~~~~~-d~~n~~~~~~~r~~~~~~~ii~   94 (116)
T PF02254_consen   63 ADAVVILTDD-DEENLLIALLARELNPDIRIIA   94 (116)
T ss_dssp             ESEEEEESSS-HHHHHHHHHHHHHHTTTSEEEE
T ss_pred             cCEEEEccCC-HHHHHHHHHHHHHHCCCCeEEE
Confidence            5888877653 45556666777774 3345553

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.84  E-value=0.061  Score=51.23  Aligned_cols=96  Identities=18%  Similarity=0.212  Sum_probs=61.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC-C
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-V  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~-~  151 (401)
                      ...+|||+    ||+|.+|..+++.+...|.+|++++++++....+           ...+...+....+ +.+.+.. .
T Consensus       162 ~~~~vlI~----ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~  225 (332)
T cd08259         162 KGDTVLVT----GAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-----------KELGADYVIDGSK-FSEDVKKLG  225 (332)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-----------HHcCCcEEEecHH-HHHHHHhcc
Confidence            35789999    9999999999999999999999998876443211           1112222221111 2222221 1


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ++|.|+++++..  .....++.....|  +||.++..
T Consensus       226 ~~d~v~~~~g~~--~~~~~~~~~~~~g--~~v~~g~~  258 (332)
T cd08259         226 GADVVIELVGSP--TIEESLRSLNKGG--RLVLIGNV  258 (332)
T ss_pred             CCCEEEECCChH--HHHHHHHHhhcCC--EEEEEcCC
Confidence            479999998843  3455555555444  68887754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=95.82  E-value=0.07  Score=49.57  Aligned_cols=108  Identities=21%  Similarity=0.317  Sum_probs=71.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCe-----------EEEcC--
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-----------TVWGD--  140 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~D--  140 (401)
                      .=|.|+     |.|.+|+|++..|++.|. ++.+++-+.-+.+.+.......+.+...+++.           +...|  
T Consensus        75 syVVVV-----G~GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar  149 (430)
T KOG2018|consen   75 SYVVVV-----GAGGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDAR  149 (430)
T ss_pred             cEEEEE-----ecCchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHH
Confidence            347788     678899999999999997 68888877766555544333333333322221           12222  


Q ss_pred             -----HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          141 -----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       141 -----~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                           .++-+.++.+ +||.|++|.. |++.-..++++|-+.|++ +  +||+++-.
T Consensus       150 ~~l~~~~s~edll~g-nPdFvvDciD-NidtKVdLL~y~~~~~l~-V--iss~Gaaa  201 (430)
T KOG2018|consen  150 NMLWTSSSEEDLLSG-NPDFVVDCID-NIDTKVDLLEYCYNHGLK-V--ISSTGAAA  201 (430)
T ss_pred             HhhcCCCchhhhhcC-CCCeEeEhhh-hhhhhhHHHHHHHHcCCc-e--EeccCccc
Confidence                 3444455554 3999999974 588888999999999986 3  35555443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.80  E-value=0.0073  Score=57.00  Aligned_cols=35  Identities=20%  Similarity=0.327  Sum_probs=31.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGD  112 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~  112 (401)
                      ++++++|+    || |.+|+.++..|.+.|++ |++++|+.
T Consensus       125 ~~k~vlI~----GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVI----GA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            45789999    88 89999999999999986 99999986

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.78  E-value=0.081  Score=50.33  Aligned_cols=97  Identities=26%  Similarity=0.266  Sum_probs=64.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcC--CCeEEEc-CHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWG-DPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~-D~~~~~~~~~  149 (401)
                      |||.|+    |++|.||+.++..|+.+|.  +++.++.+  +.....       -++.+.  ...+... ..+++.+.++
T Consensus         1 ~KI~II----GaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~a-------lDL~~~~~~~~i~~~~~~~~~y~~~~   67 (310)
T cd01337           1 VKVAVL----GAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVA-------ADLSHINTPAKVTGYLGPEELKKALK   67 (310)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceee-------hHhHhCCCcceEEEecCCCchHHhcC
Confidence            689999    9999999999999998884  78888876  222111       112211  1222221 2234556777


Q ss_pred             CCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      ++  |+||-+||.              |....+.+.+..++.+.+ .+|.+|
T Consensus        68 da--DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt  117 (310)
T cd01337          68 GA--DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS  117 (310)
T ss_pred             CC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            77  999999994              566677788888777654 455555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=95.74  E-value=0.062  Score=51.47  Aligned_cols=100  Identities=14%  Similarity=0.057  Sum_probs=57.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ||+||||    |+.+-+  .+++.|.+.|  ++|++++.++..........   +-.+  +... .....+.+.+++...
T Consensus         1 ~~~vLv~----g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~~~~~~d~---~~~~--p~~~-~~~~~~~l~~~~~~~   68 (326)
T PRK12767          1 MMNILVT----SAGRRV--QLVKALKKSLLKGRVIGADISELAPALYFADK---FYVV--PKVT-DPNYIDRLLDICKKE   68 (326)
T ss_pred             CceEEEe----cCCccH--HHHHHHHHhccCCEEEEECCCCcchhhHhccC---cEec--CCCC-ChhHHHHHHHHHHHh
Confidence            6899999    886555  8899999994  99999987653321100000   0000  0000 000135666777777


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ++|+|+-+....+.....+.+...+.|+ +++..+
T Consensus        69 ~id~ii~~~d~~~~~~a~~~~~l~~~g~-~~~~~~  102 (326)
T PRK12767         69 KIDLLIPLIDPELPLLAQNRDRFEEIGV-KVLVSS  102 (326)
T ss_pred             CCCEEEECCcHHHHHHHHHHHHHHHcCc-EEEeCC
Confidence            8999997654433334444555555665 344443

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.74  E-value=0.05  Score=52.28  Aligned_cols=97  Identities=24%  Similarity=0.317  Sum_probs=63.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc----C-HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D-PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D-~~~~~~~~  148 (401)
                      ..+|||+    ||+|.+|...++.+...|+.|++.+.+.++...++           ..+.+.+..    | .+.+.++.
T Consensus       143 g~~VLV~----gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-----------~lGAd~vi~y~~~~~~~~v~~~t  207 (326)
T COG0604         143 GETVLVH----GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-----------ELGADHVINYREEDFVEQVRELT  207 (326)
T ss_pred             CCEEEEe----cCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-----------hcCCCEEEcCCcccHHHHHHHHc
Confidence            6899999    99999999999999999977777766665443211           123322211    2 44455566


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      .+.++|+|++..|.  ......++.++..|  +++.+....
T Consensus       208 ~g~gvDvv~D~vG~--~~~~~~l~~l~~~G--~lv~ig~~~  244 (326)
T COG0604         208 GGKGVDVVLDTVGG--DTFAASLAALAPGG--RLVSIGALS  244 (326)
T ss_pred             CCCCceEEEECCCH--HHHHHHHHHhccCC--EEEEEecCC
Confidence            66568999998873  33334555555554  688776543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.71  E-value=0.044  Score=48.45  Aligned_cols=92  Identities=20%  Similarity=0.206  Sum_probs=56.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      ||++.|.     |+|.||..++++|.+.||+|++-.|+.++.....       .....+.   +  -..+...+.+.+  
T Consensus         1 m~~~~i~-----GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~-------a~~l~~~---i--~~~~~~dA~~~a--   61 (211)
T COG2085           1 MMIIAII-----GTGNIGSALALRLAKAGHEVIIGSSRGPKALAAA-------AAALGPL---I--TGGSNEDAAALA--   61 (211)
T ss_pred             CcEEEEe-----ccChHHHHHHHHHHhCCCeEEEecCCChhHHHHH-------HHhhccc---c--ccCChHHHHhcC--
Confidence            4555555     9999999999999999999999876665432210       0111111   1  123344455555  


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecc
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISS  187 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS  187 (401)
                      |+||-..  .+.....++...+.. + .++|.-.+
T Consensus        62 DVVvLAV--P~~a~~~v~~~l~~~~~-~KIvID~t   93 (211)
T COG2085          62 DVVVLAV--PFEAIPDVLAELRDALG-GKIVIDAT   93 (211)
T ss_pred             CEEEEec--cHHHHHhHHHHHHHHhC-CeEEEecC
Confidence            9998754  366666667766653 4 34554443

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=95.70  E-value=0.071  Score=48.33  Aligned_cols=96  Identities=14%  Similarity=0.174  Sum_probs=67.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      +++|||.    |||+ =++.|+++|...+..+++.+-.........         ...+....=.++.+.+.+.++..++
T Consensus         2 ~~~ilvl----GGT~-Dar~la~~L~~~~~~~~~ss~t~~g~~l~~---------~~~~~~~~G~l~~e~l~~~l~e~~i   67 (257)
T COG2099           2 MMRILLL----GGTS-DARALAKKLAAAPVDIILSSLTGYGAKLAE---------QIGPVRVGGFLGAEGLAAFLREEGI   67 (257)
T ss_pred             CceEEEE----eccH-HHHHHHHHhhccCccEEEEEcccccccchh---------ccCCeeecCcCCHHHHHHHHHHcCC
Confidence            6899999    9997 589999999999865555443332221111         0111222233469999999999999


Q ss_pred             cEEEeCCCC-ChhhHHHHHHHHHhCCCCEEE
Q 015746          154 DVVLDNNGK-NLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       154 d~Vv~~a~~-~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      |.||+..-. -...+.|.+++|++.|+..+.
T Consensus        68 ~llIDATHPyAa~iS~Na~~aake~gipy~r   98 (257)
T COG2099          68 DLLIDATHPYAARISQNAARAAKETGIPYLR   98 (257)
T ss_pred             CEEEECCChHHHHHHHHHHHHHHHhCCcEEE
Confidence            999986542 357789999999999997444

>PRK14851 hypothetical protein; Provisional

Probab=95.69  E-value=0.17  Score=53.24  Aligned_cols=109  Identities=17%  Similarity=0.176  Sum_probs=69.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCC--Ce
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAG--GK  135 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~--~~  135 (401)
                      ...+|+|+     |.|.+|+++++.|...|. ++++++.+.-....+..+-.....++.              .+.  ++
T Consensus        42 ~~~~VlIv-----G~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~  116 (679)
T PRK14851         42 AEAKVAIP-----GMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEIT  116 (679)
T ss_pred             hcCeEEEE-----CcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEE
Confidence            45799999     588899999999999996 677777655333222222111111111              122  33


Q ss_pred             EEEcC--HhhHHHhhcCCcccEEEeCCCCC-hhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          136 TVWGD--PAEVGNVVGGVTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       136 ~~~~D--~~~~~~~~~~~~~d~Vv~~a~~~-~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      .+...  .+++...+.++  |+||++.... +..-..+.+.|++.++. +|+.+..+
T Consensus       117 ~~~~~i~~~n~~~~l~~~--DvVid~~D~~~~~~r~~l~~~c~~~~iP-~i~~g~~G  170 (679)
T PRK14851        117 PFPAGINADNMDAFLDGV--DVVLDGLDFFQFEIRRTLFNMAREKGIP-VITAGPLG  170 (679)
T ss_pred             EEecCCChHHHHHHHhCC--CEEEECCCCCcHHHHHHHHHHHHHCCCC-EEEeeccc
Confidence            33332  67788888876  9999887542 44455778899999985 77766444

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=95.68  E-value=0.4  Score=48.20  Aligned_cols=87  Identities=20%  Similarity=0.256  Sum_probs=60.7

Q ss_pred             ccCeEEEEecCCCcc---ccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHh
Q 015746           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~  147 (401)
                      ..++|.|+    |++   |.+|..+++.|++.||  +|+.+........                ++.++    .++.++
T Consensus         6 ~p~siavv----GaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i~----------------G~~~~----~sl~~l   61 (447)
T TIGR02717         6 NPKSVAVI----GASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEIL----------------GVKAY----PSVLEI   61 (447)
T ss_pred             CCCEEEEE----ccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCccC----------------Ccccc----CCHHHC
Confidence            35789999    997   6789999999999998  5766654432111                22222    234443


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      -.  .+|.++-+..  -..+..+++.|.+.|++.+|.+|+
T Consensus        62 p~--~~Dlavi~vp--~~~~~~~l~e~~~~gv~~~vi~s~   97 (447)
T TIGR02717        62 PD--PVDLAVIVVP--AKYVPQVVEECGEKGVKGAVVITA   97 (447)
T ss_pred             CC--CCCEEEEecC--HHHHHHHHHHHHhcCCCEEEEECC
Confidence            23  3688876543  677888899999999998888876

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.67  E-value=0.097  Score=49.09  Aligned_cols=111  Identities=20%  Similarity=0.305  Sum_probs=72.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC---------------cccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~---------------~~~~l~~~~~~~  136 (401)
                      ...+|||+     |.|.+|..+++.|...|. +|++++.+.-....+..+-+.               ++.++. +.+.+
T Consensus        18 ~~s~VLIv-----G~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLN-p~V~V   91 (286)
T cd01491          18 QKSNVLIS-----GLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELN-PYVPV   91 (286)
T ss_pred             hcCcEEEE-----cCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHC-CCCEE
Confidence            35789999     677899999999999996 688887665333333221111               111221 23333


Q ss_pred             EEcCHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       137 ~~~D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      ...+.....+.+..  +|+||.+.. ++.....+-++|++.++ .||...+.+.||.
T Consensus        92 ~~~~~~~~~~~l~~--fdvVV~~~~-~~~~~~~in~~c~~~~i-pfI~a~~~G~~G~  144 (286)
T cd01491          92 TVSTGPLTTDELLK--FQVVVLTDA-SLEDQLKINEFCHSPGI-KFISADTRGLFGS  144 (286)
T ss_pred             EEEeccCCHHHHhc--CCEEEEecC-CHHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence            22221112345555  499998865 77777888899999997 5999999888774

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.67  E-value=0.12  Score=50.49  Aligned_cols=112  Identities=18%  Similarity=0.248  Sum_probs=73.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCc---------------ccchhcCCCe
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR---------------FNEIVSAGGK  135 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~---------------~~~l~~~~~~  135 (401)
                      ....+|+|+     |.|.+|..+++.|...|. ++++++.+.-....+..+-...               +..+. +.++
T Consensus        39 l~~~~Vlii-----G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n-p~v~  112 (370)
T PRK05600         39 LHNARVLVI-----GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ-PDIR  112 (370)
T ss_pred             hcCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC-CCCe
Confidence            345789999     678899999999999996 8888888753333332221111               11111 2333


Q ss_pred             EEEc----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          136 TVWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       136 ~~~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      +...    +.+...++++++  |+||.+... +..-..+-++|.+.++. +|+.+..+.+|.
T Consensus       113 i~~~~~~i~~~~~~~~~~~~--DlVid~~Dn-~~~r~~in~~~~~~~iP-~v~~~~~g~~G~  170 (370)
T PRK05600        113 VNALRERLTAENAVELLNGV--DLVLDGSDS-FATKFLVADAAEITGTP-LVWGTVLRFHGE  170 (370)
T ss_pred             eEEeeeecCHHHHHHHHhCC--CEEEECCCC-HHHHHHHHHHHHHcCCC-EEEEEEecCEEE
Confidence            2222    256677788876  999998764 55555566788999975 888887665553

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.67  E-value=0.1  Score=45.28  Aligned_cols=108  Identities=18%  Similarity=0.222  Sum_probs=67.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCC--------------CcccchhcCCCeE--EE
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPF--------------NRFNEIVSAGGKT--VW  138 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~--------------~~~~~l~~~~~~~--~~  138 (401)
                      +|+|.    | .|.+|.++++.|...|. ++++++.+.-....+.++..              .++.++ .+.+++  +.
T Consensus         1 ~VlVi----G-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~l-np~v~i~~~~   74 (174)
T cd01487           1 KVGIA----G-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREI-NPFVKIEAIN   74 (174)
T ss_pred             CEEEE----C-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHH-CCCCEEEEEE
Confidence            58999    5 68999999999999998 59999887622222211110              011111 123333  21


Q ss_pred             --cCHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecccccccC
Q 015746          139 --GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAGIYKP  193 (401)
Q Consensus       139 --~D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~  193 (401)
                        .+.+.+.+.++++  |+||.+. -|...-..+.+.|.+. +++ ||+.+..+-|+.
T Consensus        75 ~~~~~~~~~~~l~~~--DlVi~~~-d~~~~r~~i~~~~~~~~~ip-~i~~~~~~~~~~  128 (174)
T cd01487          75 IKIDENNLEGLFGDC--DIVVEAF-DNAETKAMLAESLLGNKNKP-VVCASGMAGFGD  128 (174)
T ss_pred             eecChhhHHHHhcCC--CEEEECC-CCHHHHHHHHHHHHHHCCCC-EEEEehhhccCC
Confidence              2355667778775  9999994 4556556677877777 764 887765554443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.66  E-value=0.15  Score=45.75  Aligned_cols=111  Identities=18%  Similarity=0.229  Sum_probs=70.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCC--------------CcccchhcCCCeEE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPF--------------NRFNEIVSAGGKTV  137 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~--------------~~~~~l~~~~~~~~  137 (401)
                      ...+|+|+    | .|.+|..+++.|...|. ++++++.+.-....+..+-.              .++..+ .+.+++.
T Consensus        27 ~~~~V~Vi----G-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~l-np~v~v~  100 (212)
T PRK08644         27 KKAKVGIA----G-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEI-NPFVEIE  100 (212)
T ss_pred             hCCCEEEE----C-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHH-CCCCEEE
Confidence            45789999    5 68999999999999997 58888887422222221100              001111 1233332


Q ss_pred             Ec----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecccccccC
Q 015746          138 WG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAGIYKP  193 (401)
Q Consensus       138 ~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~  193 (401)
                      ..    +.+++.+.+.++  |+||.+. -+......+.+.|.+. +++ +|+.+..+-|+.
T Consensus       101 ~~~~~i~~~~~~~~~~~~--DvVI~a~-D~~~~r~~l~~~~~~~~~~p-~I~~~~~~~~~~  157 (212)
T PRK08644        101 AHNEKIDEDNIEELFKDC--DIVVEAF-DNAETKAMLVETVLEHPGKK-LVAASGMAGYGD  157 (212)
T ss_pred             EEeeecCHHHHHHHHcCC--CEEEECC-CCHHHHHHHHHHHHHhCCCC-EEEeehhhccCC
Confidence            22    245566777765  9999984 3566666778888888 864 888765555543

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.64  E-value=0.047  Score=51.74  Aligned_cols=38  Identities=13%  Similarity=0.270  Sum_probs=33.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      |+|-|+     |.|.+|..+++.|.+.||+|.+.+|++++...
T Consensus         1 M~Ig~I-----GlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~   38 (298)
T TIGR00872         1 MQLGLI-----GLGRMGANIVRRLAKRGHDCVGYDHDQDAVKA   38 (298)
T ss_pred             CEEEEE-----cchHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            579999     58999999999999999999999998866543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.63  E-value=0.079  Score=50.64  Aligned_cols=97  Identities=15%  Similarity=0.156  Sum_probs=63.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-CHhhHHH---h
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-DPAEVGN---V  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-D~~~~~~---~  147 (401)
                      .+.+|||+    ||+|.+|..+++.+...|.+|++++++.++.+.++           ..+++.+. . +.+.+.+   .
T Consensus       138 ~g~~VLI~----ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~~~  202 (325)
T TIGR02825       138 GGETVMVN----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-----------KLGFDVAFNYKTVKSLEETLKK  202 (325)
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeccccccHHHHHHH
Confidence            45799999    99999999999999999999999888775543221           12332222 1 1122322   2


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+.++|+|+++.|.  ......++.++..|  +||.++..
T Consensus       203 ~~~~gvdvv~d~~G~--~~~~~~~~~l~~~G--~iv~~G~~  239 (325)
T TIGR02825       203 ASPDGYDCYFDNVGG--EFSNTVIGQMKKFG--RIAICGAI  239 (325)
T ss_pred             hCCCCeEEEEECCCH--HHHHHHHHHhCcCc--EEEEecch
Confidence            233358999999874  34466667666655  68877653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.59  E-value=0.043  Score=47.30  Aligned_cols=57  Identities=28%  Similarity=0.353  Sum_probs=46.3

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ...+++|||+    |+++.+|..+++.|.++|.+|+++.|..                             +++.+.+..
T Consensus        41 ~l~gk~vlVi----G~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~   87 (168)
T cd01080          41 DLAGKKVVVV----GRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQ   87 (168)
T ss_pred             CCCCCEEEEE----CCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhh
Confidence            3567999999    8877889999999999999999888753                             345566777


Q ss_pred             CcccEEEeCCCC
Q 015746          151 VTFDVVLDNNGK  162 (401)
Q Consensus       151 ~~~d~Vv~~a~~  162 (401)
                      +  |+||.+.+.
T Consensus        88 a--DiVIsat~~   97 (168)
T cd01080          88 A--DIVIVAVGK   97 (168)
T ss_pred             C--CEEEEcCCC
Confidence            6  999988774

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.58  E-value=0.074  Score=50.68  Aligned_cols=97  Identities=15%  Similarity=0.141  Sum_probs=63.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~~~~~  147 (401)
                      .+.+|||+    ||+|-+|..+++.+...|.+|+++++++++.+.++           ..+++. +..+    .+.+.+.
T Consensus       143 ~g~~vlI~----ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-----------~~Ga~~vi~~~~~~~~~~v~~~  207 (329)
T cd08294         143 AGETVVVN----GAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-----------ELGFDAVFNYKTVSLEEALKEA  207 (329)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeCCCccHHHHHHHH
Confidence            45799999    99999999999999999999999988775543221           113322 2111    2223333


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      . +.++|+|+++.+.  ......++.++..|  +|+.++...
T Consensus       208 ~-~~gvd~vld~~g~--~~~~~~~~~l~~~G--~iv~~g~~~  244 (329)
T cd08294         208 A-PDGIDCYFDNVGG--EFSSTVLSHMNDFG--RVAVCGSIS  244 (329)
T ss_pred             C-CCCcEEEEECCCH--HHHHHHHHhhccCC--EEEEEcchh
Confidence            2 2358999999874  44455566665554  688776543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.54  E-value=0.011  Score=55.73  Aligned_cols=93  Identities=18%  Similarity=0.190  Sum_probs=60.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc--------------hhcCCCeEEEc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKTVWG  139 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--------------l~~~~~~~~~~  139 (401)
                      .++|.|+    | .|.+|..++..|+..|++|++++++++..++....-...+..              ....++.+   
T Consensus         3 ~~kIaVi----G-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---   74 (287)
T PRK08293          3 IKNVTVA----G-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---   74 (287)
T ss_pred             ccEEEEE----C-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---
Confidence            4789999    5 699999999999999999999999876543221100000000              00012221   


Q ss_pred             CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC
Q 015746          140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS  177 (401)
Q Consensus       140 D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~  177 (401)
                       ..++.+++.++  |+||.+...+......+++.+.+.
T Consensus        75 -~~d~~~a~~~a--DlVieavpe~~~~k~~~~~~l~~~  109 (287)
T PRK08293         75 -TTDLAEAVKDA--DLVIEAVPEDPEIKGDFYEELAKV  109 (287)
T ss_pred             -eCCHHHHhcCC--CEEEEeccCCHHHHHHHHHHHHhh
Confidence             13455667776  999999988877777777766554

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.53  E-value=0.079  Score=50.96  Aligned_cols=96  Identities=17%  Similarity=0.144  Sum_probs=63.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cCH----hhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GDP----AEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D~----~~~~~  146 (401)
                      .+.+|||+    ||+|.+|..+++.+...|.+|++++++.++.+.++..          .+++ ++. .+.    +.+.+
T Consensus       151 ~g~~VlI~----Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~----------lGa~~vi~~~~~~~~~~~i~~  216 (338)
T cd08295         151 KGETVFVS----AASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK----------LGFDDAFNYKEEPDLDAALKR  216 (338)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----------cCCceeEEcCCcccHHHHHHH
Confidence            46799999    9999999999999999999999988877554322110          1222 222 111    22233


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .. +.++|+|+++.|.  ......++.++..|  +|+.++.
T Consensus       217 ~~-~~gvd~v~d~~g~--~~~~~~~~~l~~~G--~iv~~G~  252 (338)
T cd08295         217 YF-PNGIDIYFDNVGG--KMLDAVLLNMNLHG--RIAACGM  252 (338)
T ss_pred             hC-CCCcEEEEECCCH--HHHHHHHHHhccCc--EEEEecc
Confidence            32 2357999999874  45566677776665  6887764

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=95.53  E-value=0.57  Score=43.99  Aligned_cols=91  Identities=14%  Similarity=0.130  Sum_probs=60.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +.+|||-    |-||.+|+.+.+.|+..|.+++. .-++.+ .+.           +.  ++.+    ..++.++.+...
T Consensus         6 ~~~~~~~----g~~~~~~~~~~~~~~~~g~~~v~-~V~p~~~~~~-----------v~--G~~~----y~sv~dlp~~~~   63 (286)
T TIGR01019         6 DTKVIVQ----GITGSQGSFHTEQMLAYGTNIVG-GVTPGKGGTT-----------VL--GLPV----FDSVKEAVEETG   63 (286)
T ss_pred             CCcEEEe----cCCcHHHHHHHHHHHhCCCCEEE-EECCCCCcce-----------ec--Ceec----cCCHHHHhhccC
Confidence            4689999    99999999999999999988444 333321 111           10  2222    233444444323


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +|.++-+..  -..+..+++.|.+.|++.+|.+|+.
T Consensus        64 ~Dlavi~vp--a~~v~~~l~e~~~~Gvk~avIis~G   97 (286)
T TIGR01019        64 ANASVIFVP--APFAADAIFEAIDAGIELIVCITEG   97 (286)
T ss_pred             CCEEEEecC--HHHHHHHHHHHHHCCCCEEEEECCC
Confidence            588777654  5667778888888899888877763

ATP citrate lyases appear to form an outgroup.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.52  E-value=0.021  Score=53.84  Aligned_cols=103  Identities=14%  Similarity=0.123  Sum_probs=64.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-------------CCCeEEEcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-------------AGGKTVWGD  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~D  140 (401)
                      +++|-|+    | .|.+|..++..|+..||+|++++++++..+.....-...++.+..             .++.+    
T Consensus         5 ~~~V~Vi----G-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~----   75 (286)
T PRK07819          5 IQRVGVV----G-AGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRF----   75 (286)
T ss_pred             ccEEEEE----c-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEe----
Confidence            4689999    5 599999999999999999999999987654311000000000110             11111    


Q ss_pred             HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCC-CCEEEEeccc
Q 015746          141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSA  188 (401)
Q Consensus       141 ~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~g-v~~~v~~SS~  188 (401)
                      ..+++ .+.++  |+||.+...+...-+.++..+.+.- -+.-|++|+.
T Consensus        76 ~~~~~-~~~~~--d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snT  121 (286)
T PRK07819         76 TTDLG-DFADR--QLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNT  121 (286)
T ss_pred             eCCHH-HhCCC--CEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            12332 35665  9999999988888877777666652 2234445543

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.52  E-value=0.15  Score=46.70  Aligned_cols=93  Identities=17%  Similarity=0.142  Sum_probs=57.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEE-EEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVT-IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~-~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ++|||.|+    |++|-+|+.+++.+.+.. +++. ++.|..........   ..+..+...++.+    .+++....  
T Consensus         1 ~~iki~V~----Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~---ge~~g~~~~gv~v----~~~~~~~~--   67 (266)
T COG0289           1 SMIKVAVA----GASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDA---GELAGLGLLGVPV----TDDLLLVK--   67 (266)
T ss_pred             CCceEEEE----cCCChHHHHHHHHHhcCCCceEEEEEecCCccccccch---hhhccccccCcee----ecchhhcc--
Confidence            36899999    999999999999999885 5544 45565533211000   0000011011111    11222333  


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      .++|++|++...  ..+...++.|.+.++.
T Consensus        68 ~~~DV~IDFT~P--~~~~~~l~~~~~~~~~   95 (266)
T COG0289          68 ADADVLIDFTTP--EATLENLEFALEHGKP   95 (266)
T ss_pred             cCCCEEEECCCc--hhhHHHHHHHHHcCCC
Confidence            346999999874  7888999999999974

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.50  E-value=0.015  Score=52.51  Aligned_cols=38  Identities=26%  Similarity=0.350  Sum_probs=34.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      |+|.|+    ||+|.+|..+++.|.+.||+|++.+|++++..
T Consensus         1 MkI~II----GG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~   38 (219)
T TIGR01915         1 MKIAVL----GGTGDQGKGLALRLAKAGNKIIIGSRDLEKAE   38 (219)
T ss_pred             CEEEEE----cCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHH
Confidence            689999    99999999999999999999999999876543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=95.47  E-value=0.048  Score=54.93  Aligned_cols=105  Identities=15%  Similarity=0.259  Sum_probs=67.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCC---------CCCcccchhc----CCCeEEE-c
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP---------PFNRFNEIVS----AGGKTVW-G  139 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~l~~----~~~~~~~-~  139 (401)
                      |.+|-|+     |.|.+|..+++.|+++||+|++.+|++++.+.+...         ....+.++..    +++.++. .
T Consensus         1 ~~~IgvI-----GLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~   75 (470)
T PTZ00142          1 MSDIGLI-----GLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIK   75 (470)
T ss_pred             CCEEEEE-----eEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeC
Confidence            3579999     799999999999999999999999988764433211         1112222221    2322222 2


Q ss_pred             CHhhHHHhh----cCCc-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          140 DPAEVGNVV----GGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       140 D~~~~~~~~----~~~~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      +.+.++.++    .... =|+||++.......+....+.+++.|+ +||=
T Consensus        76 ~~~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi-~fld  124 (470)
T PTZ00142         76 AGEAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGI-LYLG  124 (470)
T ss_pred             ChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEEc
Confidence            332232222    1111 278888888888888888899988887 4663

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.46  E-value=0.094  Score=49.02  Aligned_cols=103  Identities=24%  Similarity=0.297  Sum_probs=69.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCccc----chhc-CCCeEEEcCHhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFN----EIVS-AGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~----~l~~-~~~~~~~~D~~~~~~~~  148 (401)
                      ++|-++     |.|-.|..++++|+++||+|++.+|++++. ..+....-....    .... +-+-....|.+++..++
T Consensus         1 ~kIafI-----GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~   75 (286)
T COG2084           1 MKIAFI-----GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVL   75 (286)
T ss_pred             CeEEEE-----cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHH
Confidence            467888     899999999999999999999999999873 222211111111    1111 11233334666777766


Q ss_pred             cCC-------c-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          149 GGV-------T-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       149 ~~~-------~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      .+.       + =.++|++..+....++.+.+.+++.|.. |+
T Consensus        76 ~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~-~l  117 (286)
T COG2084          76 FGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLE-FL  117 (286)
T ss_pred             hCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCc-EE
Confidence            431       1 2677888888899999999999999873 55

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.46  E-value=0.066  Score=50.78  Aligned_cols=104  Identities=16%  Similarity=0.265  Sum_probs=58.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCe---EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +++|-|+    |+||.+|+.+++.|.++...   +.++...+....+        +.++....+.+    +++......-
T Consensus         1 ~~~Vavv----GATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~--------~~~f~~~~~~v----~~~~~~~~~~   64 (334)
T COG0136           1 KLNVAVL----GATGAVGQVLLELLEERHFPFEELVLLASARSAGKK--------YIEFGGKSIGV----PEDAADEFVF   64 (334)
T ss_pred             CcEEEEE----eccchHHHHHHHHHHhcCCCcceEEEEecccccCCc--------cccccCccccC----cccccccccc
Confidence            4789999    99999999999999997543   3333222211111        01111111111    1211111111


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      .++|+||.++|-++.  +.+...+.++|.   +.++..+.|....+.|
T Consensus        65 ~~~Divf~~ag~~~s--~~~~p~~~~~G~---~VIdnsSa~Rm~~DVP  107 (334)
T COG0136          65 SDVDIVFFAAGGSVS--KEVEPKAAEAGC---VVIDNSSAFRMDPDVP  107 (334)
T ss_pred             ccCCEEEEeCchHHH--HHHHHHHHHcCC---EEEeCCcccccCCCCC
Confidence            146999999985444  778888888883   4445445555443333

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=95.44  E-value=0.098  Score=49.71  Aligned_cols=83  Identities=20%  Similarity=0.230  Sum_probs=55.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ++++|-|+    ||||++|..+++.|.++.+ ++..+..+...                  .+       ......+.+ 
T Consensus         1 ~~~~VaIv----GAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------------~~-------~~~~~~~~~-   50 (313)
T PRK11863          1 MKPKVFID----GEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------------DA-------AARRELLNA-   50 (313)
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------------cc-------cCchhhhcC-
Confidence            36799999    9999999999999988864 55555433311                  00       111223344 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                       +|+||.+..  -.....++..+.+.|+ ++|=+|+..
T Consensus        51 -~DvvFlalp--~~~s~~~~~~~~~~g~-~VIDlSadf   84 (313)
T PRK11863         51 -ADVAILCLP--DDAAREAVALIDNPAT-RVIDASTAH   84 (313)
T ss_pred             -CCEEEECCC--HHHHHHHHHHHHhCCC-EEEECChhh
Confidence             499998775  3455666777767776 588788744

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.41  E-value=0.14  Score=50.90  Aligned_cols=156  Identities=7%  Similarity=-0.023  Sum_probs=85.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-------CC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-------GH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~  144 (401)
                      .-||.|+    |++|.||.+++-.|+..       |.  +++.++++.++.....-+-......+. ..+.+..+|    
T Consensus       100 ~~KV~II----GAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~-~~v~i~~~~----  170 (444)
T PLN00112        100 LINVAVS----GAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLL-REVSIGIDP----  170 (444)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhc-CceEEecCC----
Confidence            3589999    99999999999999988       54  788888888766542211000000111 122222233    


Q ss_pred             HHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHh-CCCC-EEEEecccc---cccCCCCCCCCCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKS-SGVK-QFLFISSAG---IYKPADEPPHVEGDVV  205 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~-~gv~-~~v~~SS~~---vy~~~~~~~~~E~~~~  205 (401)
                      .+.++++  |+||-.+|.              |....+.+...+.+ ++.. .+|.+|-..   .|--....++....-.
T Consensus       171 ye~~kda--DiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~~~~rVi  248 (444)
T PLN00112        171 YEVFQDA--EWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNF  248 (444)
T ss_pred             HHHhCcC--CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCCCCcceE
Confidence            2345666  999999994              46667788888888 5544 455555311   0000000001000000


Q ss_pred             C---CCCChHHHHHHHHHhCCCeEEEecCeeecCCCCC
Q 015746          206 K---PDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK  240 (401)
Q Consensus       206 ~---~~~~~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~  240 (401)
                      .   ...+-+....+....++...-|+-.+|+|.+...
T Consensus       249 GtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGds  286 (444)
T PLN00112        249 HALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTT  286 (444)
T ss_pred             EeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCCc
Confidence            0   0001122222334458888888777889987654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.41  E-value=0.063  Score=50.80  Aligned_cols=92  Identities=20%  Similarity=0.258  Sum_probs=59.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ..++|+|+    | .|.+|+.+++.|...|.+|++.+|+.+...           .....+.+++  +.+++.+.+.++ 
T Consensus       151 ~g~kvlVi----G-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~-----------~~~~~G~~~~--~~~~l~~~l~~a-  211 (296)
T PRK08306        151 HGSNVLVL----G-FGRTGMTLARTLKALGANVTVGARKSAHLA-----------RITEMGLSPF--HLSELAEEVGKI-  211 (296)
T ss_pred             CCCEEEEE----C-CcHHHHHHHHHHHHCCCEEEEEECCHHHHH-----------HHHHcCCeee--cHHHHHHHhCCC-
Confidence            46899999    6 588999999999999999999999864321           1111234433  445677777775 


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       |+||++.... ......++.++. + ..+|-+++
T Consensus       212 -DiVI~t~p~~-~i~~~~l~~~~~-g-~vIIDla~  242 (296)
T PRK08306        212 -DIIFNTIPAL-VLTKEVLSKMPP-E-ALIIDLAS  242 (296)
T ss_pred             -CEEEECCChh-hhhHHHHHcCCC-C-cEEEEEcc
Confidence             9999986532 123333444433 2 13554554

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.40  E-value=0.13  Score=49.42  Aligned_cols=96  Identities=16%  Similarity=0.123  Sum_probs=59.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      +.++|.|+    ||||++|+.+++.|.++.|   ++..+.........+.         +....+.+.  +.+.  ..+.
T Consensus         3 ~~~~vaIv----GATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~---------~~~~~~~v~--~~~~--~~~~   65 (336)
T PRK08040          3 EGWNIALL----GATGAVGEALLELLAERQFPVGELYALASEESAGETLR---------FGGKSVTVQ--DAAE--FDWS   65 (336)
T ss_pred             CCCEEEEE----ccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE---------ECCcceEEE--eCch--hhcc
Confidence            45799999    9999999999999999655   5666644332222211         111122222  2221  1223


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~v  190 (401)
                      +  +|+||.+.+  -.....++..+.+.|+ ++|=.|+..=
T Consensus        66 ~--~Dvvf~a~p--~~~s~~~~~~~~~~g~-~VIDlS~~fR  101 (336)
T PRK08040         66 Q--AQLAFFVAG--REASAAYAEEATNAGC-LVIDSSGLFA  101 (336)
T ss_pred             C--CCEEEECCC--HHHHHHHHHHHHHCCC-EEEECChHhc
Confidence            4  599999886  3466677777777787 5777777543

>PRK07411 hypothetical protein; Validated

Probab=95.39  E-value=0.18  Score=49.76  Aligned_cols=112  Identities=14%  Similarity=0.101  Sum_probs=71.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeEE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKTV  137 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~~  137 (401)
                      ...+|||+     |.|.+|..+++.|...|. ++++++.+.-....+..+-.....++.              .+.+++.
T Consensus        37 ~~~~Vliv-----G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~  111 (390)
T PRK07411         37 KAASVLCI-----GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVD  111 (390)
T ss_pred             hcCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEE
Confidence            45799999     677899999999999996 677777765433333322211111111              1333332


Q ss_pred             EcC----HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          138 WGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       138 ~~D----~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      ..+    .+...+.+.++  |+||.+... +..-..+-++|.+.++ .+|+.+..+.||.
T Consensus       112 ~~~~~~~~~~~~~~~~~~--D~Vvd~~d~-~~~r~~ln~~~~~~~~-p~v~~~~~g~~g~  167 (390)
T PRK07411        112 LYETRLSSENALDILAPY--DVVVDGTDN-FPTRYLVNDACVLLNK-PNVYGSIFRFEGQ  167 (390)
T ss_pred             EEecccCHHhHHHHHhCC--CEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEEEccCEEE
Confidence            222    45566777775  999998763 4444556678888886 4888877666653

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.39  E-value=0.059  Score=51.15  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=61.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC---cccchhc----CCCeEEEc-CHhhH--
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVS----AGGKTVWG-DPAEV--  144 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~l~~----~~~~~~~~-D~~~~--  144 (401)
                      |+|-|.     |.|.+|+.+++.|++.|++|++.+|++++...+......   ...++..    .++.++-. +.+.+  
T Consensus         1 m~Ig~I-----GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~   75 (301)
T PRK09599          1 MQLGMI-----GLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDA   75 (301)
T ss_pred             CEEEEE-----cccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHH
Confidence            579999     699999999999999999999999987654433221110   1111111    12211111 21122  


Q ss_pred             --HHhhcCCc-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          145 --GNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       145 --~~~~~~~~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                        ..+....+ =++||++.......+..+.+.+++.|+ +||
T Consensus        76 v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~-~~~  116 (301)
T PRK09599         76 TIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGI-HFV  116 (301)
T ss_pred             HHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCC-EEE
Confidence              22222111 267788877777778888888888876 455

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.38  E-value=0.0096  Score=52.02  Aligned_cols=100  Identities=18%  Similarity=0.220  Sum_probs=60.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-------------CCCeEEEcCHh
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-------------AGGKTVWGDPA  142 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~D~~  142 (401)
                      +|.|+    |+ |.+|+.|+..++..|++|++++++++........-...+..+..             .++.+    ..
T Consensus         1 ~V~Vi----Ga-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~----~~   71 (180)
T PF02737_consen    1 KVAVI----GA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF----TT   71 (180)
T ss_dssp             EEEEE----S--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE----ES
T ss_pred             CEEEE----cC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc----cc
Confidence            58899    65 99999999999999999999999886543211100000111100             01111    12


Q ss_pred             hHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +++.+. +  .|.||.+...++..-+.++....+.-.+.-|+.|.
T Consensus        72 dl~~~~-~--adlViEai~E~l~~K~~~~~~l~~~~~~~~ilasn  113 (180)
T PF02737_consen   72 DLEEAV-D--ADLVIEAIPEDLELKQELFAELDEICPPDTILASN  113 (180)
T ss_dssp             SGGGGC-T--ESEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE-
T ss_pred             CHHHHh-h--hheehhhccccHHHHHHHHHHHHHHhCCCceEEec
Confidence            344444 4  49999999999999999999887764334445543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.38  E-value=0.12  Score=49.20  Aligned_cols=98  Identities=16%  Similarity=0.226  Sum_probs=64.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EE-EcCH---hhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGDP---AEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~D~---~~~~~~  147 (401)
                      .+.+|+|+    |+++.+|..+++.+...|++|++++++.++...+..           .+.. ++ ..+.   ..+...
T Consensus       166 ~~~~vlI~----g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  230 (342)
T cd08266         166 PGETVLVH----GAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-----------LGADYVIDYRKEDFVREVREL  230 (342)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------cCCCeEEecCChHHHHHHHHH
Confidence            35789999    999999999999999999999998887654322110           1111 11 1222   233333


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ..+.++|.++++++.  .....+++..+..|  +++.+++..
T Consensus       231 ~~~~~~d~~i~~~g~--~~~~~~~~~l~~~G--~~v~~~~~~  268 (342)
T cd08266         231 TGKRGVDVVVEHVGA--ATWEKSLKSLARGG--RLVTCGATT  268 (342)
T ss_pred             hCCCCCcEEEECCcH--HHHHHHHHHhhcCC--EEEEEecCC
Confidence            334458999999884  34455666665554  788887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.38  E-value=0.0098  Score=50.29  Aligned_cols=75  Identities=17%  Similarity=0.232  Sum_probs=48.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ...++|+|+    |+ |.+|+.+++.|.+.| ++|++.+|+.++...+..       .+....+..   +..+..+.+++
T Consensus        17 ~~~~~i~ii----G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~~~   81 (155)
T cd01065          17 LKGKKVLIL----GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAE-------RFGELGIAI---AYLDLEELLAE   81 (155)
T ss_pred             CCCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH-------HHhhcccce---eecchhhcccc
Confidence            346899999    76 999999999999996 789999998755432111       111000111   22233344555


Q ss_pred             CcccEEEeCCCCC
Q 015746          151 VTFDVVLDNNGKN  163 (401)
Q Consensus       151 ~~~d~Vv~~a~~~  163 (401)
                      +  |+||.+....
T Consensus        82 ~--Dvvi~~~~~~   92 (155)
T cd01065          82 A--DLIINTTPVG   92 (155)
T ss_pred             C--CEEEeCcCCC
Confidence            4  9999987754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.35  E-value=0.067  Score=45.04  Aligned_cols=69  Identities=19%  Similarity=0.282  Sum_probs=50.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----------Hhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----------PAE  143 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----------~~~  143 (401)
                      ..||+|-    ||-|-+|+.+++.+.+++|-|.-++........              ..+ ++.+|          .+.
T Consensus         3 agrVivY----GGkGALGSacv~~FkannywV~siDl~eNe~Ad--------------~sI-~V~~~~swtEQe~~v~~~   63 (236)
T KOG4022|consen    3 AGRVIVY----GGKGALGSACVEFFKANNYWVLSIDLSENEQAD--------------SSI-LVDGNKSWTEQEQSVLEQ   63 (236)
T ss_pred             CceEEEE----cCcchHhHHHHHHHHhcCeEEEEEeeccccccc--------------ceE-EecCCcchhHHHHHHHHH
Confidence            3689999    999999999999999999988877765522110              011 22222          355


Q ss_pred             HHHhhcCCcccEEEeCCC
Q 015746          144 VGNVVGGVTFDVVLDNNG  161 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~  161 (401)
                      +.+.+.+.++|.|+..||
T Consensus        64 vg~sL~gekvDav~CVAG   81 (236)
T KOG4022|consen   64 VGSSLQGEKVDAVFCVAG   81 (236)
T ss_pred             HHHhhcccccceEEEeec
Confidence            667788889999999877

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=95.35  E-value=0.038  Score=53.33  Aligned_cols=106  Identities=20%  Similarity=0.250  Sum_probs=65.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC--C--CcccchhcCCCeE--EEcCHhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--F--NRFNEIVSAGGKT--VWGDPAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~--~~~~~l~~~~~~~--~~~D~~~~~~~~  148 (401)
                      |||.|.     |+||+|-..+-.|.+.||+|++++.++.+.+.+....  +  ..++++...+..-  ... ..+...++
T Consensus         1 MkI~vi-----GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f-Ttd~~~a~   74 (414)
T COG1004           1 MKITVI-----GTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF-TTDYEEAV   74 (414)
T ss_pred             CceEEE-----CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE-EcCHHHHH
Confidence            789999     8999999999999999999999999987766554321  1  1222332222221  000 34566677


Q ss_pred             cCCcccEEEeCCCC--------ChhhHHHHHHHHHhCCCC-EEEEeccc
Q 015746          149 GGVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVK-QFLFISSA  188 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~--------~~~~~~~ll~aa~~~gv~-~~v~~SS~  188 (401)
                      ++.  |++|-+-|.        ++..+..+++...+.-.+ ++|.+=|+
T Consensus        75 ~~a--dv~fIavgTP~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KST  121 (414)
T COG1004          75 KDA--DVVFIAVGTPPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKST  121 (414)
T ss_pred             hcC--CEEEEEcCCCCCCCCCccHHHHHHHHHHHHhhcCCCeEEEEcCC
Confidence            666  999887774        344444444444443222 55555443

>PRK07877 hypothetical protein; Provisional

Probab=95.33  E-value=0.15  Score=53.88  Aligned_cols=106  Identities=17%  Similarity=0.244  Sum_probs=70.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~  136 (401)
                      ...+|+|+    |. | +|++++..|...|-  ++++++.+.-....+.... ....++.              .+.+++
T Consensus       106 ~~~~V~Iv----G~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~-~~~~diG~~Kv~~a~~~l~~inp~i~v  178 (722)
T PRK07877        106 GRLRIGVV----GL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVP-AGVFDLGVNKAVVAARRIAELDPYLPV  178 (722)
T ss_pred             hcCCEEEE----Ee-c-HHHHHHHHHHHccCCCeEEEEcCCEEccccccccc-CChhhcccHHHHHHHHHHHHHCCCCEE
Confidence            35799999    88 8 99999999999994  8888887664433333221 1111111              123333


Q ss_pred             EEc----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       137 ~~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ...    +.+++.+++.++  |+||++.- |+..-..+-++|.+.++. +|+.++.+
T Consensus       179 ~~~~~~i~~~n~~~~l~~~--DlVvD~~D-~~~~R~~ln~~a~~~~iP-~i~~~~~~  231 (722)
T PRK07877        179 EVFTDGLTEDNVDAFLDGL--DVVVEECD-SLDVKVLLREAARARRIP-VLMATSDR  231 (722)
T ss_pred             EEEeccCCHHHHHHHhcCC--CEEEECCC-CHHHHHHHHHHHHHcCCC-EEEEcCCC
Confidence            332    277888888886  99999876 355555566789999985 88777533

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.31  E-value=0.018  Score=54.27  Aligned_cols=91  Identities=21%  Similarity=0.299  Sum_probs=56.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-------------CCCeEEEcCH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-------------AGGKTVWGDP  141 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~D~  141 (401)
                      ++|.|+    | .|.+|..++..|+++||+|++++++++............+.....             .++..    .
T Consensus         2 ~~V~VI----G-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~----~   72 (288)
T PRK09260          2 EKLVVV----G-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY----S   72 (288)
T ss_pred             cEEEEE----C-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE----e
Confidence            689999    5 599999999999999999999999886654321100000000000             01111    1


Q ss_pred             hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      .++.+.++++  |+||.+...+......++..+.+
T Consensus        73 ~~~~~~~~~a--D~Vi~avpe~~~~k~~~~~~l~~  105 (288)
T PRK09260         73 LDLKAAVADA--DLVIEAVPEKLELKKAVFETADA  105 (288)
T ss_pred             CcHHHhhcCC--CEEEEeccCCHHHHHHHHHHHHh
Confidence            3455667776  99999988776555555554433

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.27  E-value=0.079  Score=54.88  Aligned_cols=91  Identities=16%  Similarity=0.238  Sum_probs=61.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hhHHHh-hc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-VG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~~~~~-~~  149 (401)
                      ..+|+|.     |.|-+|+.++++|.++|++|++++.++++.+           ++.+.+..++.||.   +.++++ ++
T Consensus       417 ~~hiiI~-----G~G~~G~~la~~L~~~g~~vvvId~d~~~~~-----------~~~~~g~~~i~GD~~~~~~L~~a~i~  480 (558)
T PRK10669        417 CNHALLV-----GYGRVGSLLGEKLLAAGIPLVVIETSRTRVD-----------ELRERGIRAVLGNAANEEIMQLAHLD  480 (558)
T ss_pred             CCCEEEE-----CCChHHHHHHHHHHHCCCCEEEEECCHHHHH-----------HHHHCCCeEEEcCCCCHHHHHhcCcc
Confidence            4689999     7899999999999999999999999886543           33345788999994   434433 23


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v  183 (401)
                        +.|.|+-+...+. ...+++..+++. +..++|
T Consensus       481 --~a~~viv~~~~~~-~~~~iv~~~~~~~~~~~ii  512 (558)
T PRK10669        481 --CARWLLLTIPNGY-EAGEIVASAREKRPDIEII  512 (558)
T ss_pred             --ccCEEEEEcCChH-HHHHHHHHHHHHCCCCeEE
Confidence              3587776554432 333455555554 333444

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.26  E-value=0.12  Score=49.01  Aligned_cols=96  Identities=17%  Similarity=0.216  Sum_probs=64.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~~~~~  147 (401)
                      .+.+|||.    |++|.+|..+++.+...|.+|+++++..++...+..           .+++. +..+    .+.+.+.
T Consensus       139 ~g~~vlI~----g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~i~~~  203 (324)
T cd08292         139 PGQWLIQN----AAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-----------LGIGPVVSTEQPGWQDKVREA  203 (324)
T ss_pred             CCCEEEEc----ccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-----------cCCCEEEcCCCchHHHHHHHH
Confidence            35789999    999999999999999999999998887754432211           12222 2222    2344555


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+.++|+|+++.+..  .....++.++..|  +||.++.
T Consensus       204 ~~~~~~d~v~d~~g~~--~~~~~~~~l~~~g--~~v~~g~  239 (324)
T cd08292         204 AGGAPISVALDSVGGK--LAGELLSLLGEGG--TLVSFGS  239 (324)
T ss_pred             hCCCCCcEEEECCCCh--hHHHHHHhhcCCc--EEEEEec
Confidence            5555689999998853  3445566554544  6887764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK06849 hypothetical protein; Provisional

Probab=95.26  E-value=0.12  Score=51.01  Aligned_cols=37  Identities=32%  Similarity=0.387  Sum_probs=33.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      .+|+||||    |+...+|..+++.|.+.|++|++++..+.
T Consensus         3 ~~~~VLI~----G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLIT----GARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            46899999    99999999999999999999999987753

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.23  E-value=0.2  Score=48.29  Aligned_cols=94  Identities=17%  Similarity=0.170  Sum_probs=60.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHh-CCCe---EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      .++|-|+    ||||++|+.+++.|.+ ...+   +..+.-.......+         .+....+.+...|++++    .
T Consensus         5 ~~~VaIv----GATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~---------~~~~~~l~v~~~~~~~~----~   67 (347)
T PRK06728          5 GYHVAVV----GATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV---------QFKGREIIIQEAKINSF----E   67 (347)
T ss_pred             CCEEEEE----eCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe---------eeCCcceEEEeCCHHHh----c
Confidence            4799999    9999999999999995 5666   55554333222211         11112344444455433    4


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      +  +|+||.+++.  .....++..+.+.|. .+|=.||..
T Consensus        68 ~--~Divf~a~~~--~~s~~~~~~~~~~G~-~VID~Ss~f  102 (347)
T PRK06728         68 G--VDIAFFSAGG--EVSRQFVNQAVSSGA-IVIDNTSEY  102 (347)
T ss_pred             C--CCEEEECCCh--HHHHHHHHHHHHCCC-EEEECchhh
Confidence            4  4999998864  466677777777786 477677644

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.23  E-value=0.048  Score=54.61  Aligned_cols=36  Identities=28%  Similarity=0.448  Sum_probs=33.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      |+|.|+    ||+|.+|..+++.|.+.|++|++++|+.+.
T Consensus         1 MkI~II----GG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          1 MKISII----GGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             CEEEEE----ecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            589999    999999999999999999999999998754

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.20  E-value=0.1  Score=49.87  Aligned_cols=98  Identities=26%  Similarity=0.376  Sum_probs=64.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcCHhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D~~~~~~~~~  149 (401)
                      .+||.|+    |+ |.||+.++..|+.+|.  +++.++++.+........    +.+...  ..+.+..+|   ++ .++
T Consensus         6 ~~ki~ii----Ga-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~D----l~~~~~~~~~~~i~~~~---~~-~~~   72 (315)
T PRK00066          6 HNKVVLV----GD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMD----LSHAVPFTSPTKIYAGD---YS-DCK   72 (315)
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHH----HHhhccccCCeEEEeCC---HH-HhC
Confidence            4699999    87 9999999999999987  799999977654432211    111100  133333333   33 356


Q ss_pred             CCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      ++  |+||-++|.              |....+.+++.+++.+.+ .++.+|
T Consensus        73 ~a--divIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         73 DA--DLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CC--CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            76  999999995              455567777777777654 344444

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.17  E-value=0.066  Score=51.52  Aligned_cols=95  Identities=16%  Similarity=0.169  Sum_probs=61.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcC----HhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~~~~~~  148 (401)
                      .+|||+    ||+|.+|..+++.+...|. +|+++++++++.+.+..       +   .+++. +..+    .+.+.++.
T Consensus       156 ~~VlI~----ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~-------~---lGa~~vi~~~~~~~~~~i~~~~  221 (345)
T cd08293         156 QTMVVS----GAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS-------E---LGFDAAINYKTDNVAERLRELC  221 (345)
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-------h---cCCcEEEECCCCCHHHHHHHHC
Confidence            799999    9999999999999999998 79999887654332111       0   12222 2111    22333332


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                       +.++|+|+++.+..  .....++.++..|  +||.++..
T Consensus       222 -~~gvd~vid~~g~~--~~~~~~~~l~~~G--~iv~~G~~  256 (345)
T cd08293         222 -PEGVDVYFDNVGGE--ISDTVISQMNENS--HIILCGQI  256 (345)
T ss_pred             -CCCceEEEECCCcH--HHHHHHHHhccCC--EEEEEeee
Confidence             23589999998753  3455666666665  68877653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK14852 hypothetical protein; Provisional

Probab=95.16  E-value=0.2  Score=54.31  Aligned_cols=112  Identities=13%  Similarity=0.102  Sum_probs=73.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT-  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~-  136 (401)
                      ...+|+|+    | -|.+|+.+++.|...|. ++++++.+.-....+..+-.....++.              .+.+++ 
T Consensus       331 ~~srVlVv----G-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~  405 (989)
T PRK14852        331 LRSRVAIA----G-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIR  405 (989)
T ss_pred             hcCcEEEE----C-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEE
Confidence            45789999    4 78899999999999986 677777655333323222111111111              133333 


Q ss_pred             -EEc--CHhhHHHhhcCCcccEEEeCCCC-ChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       137 -~~~--D~~~~~~~~~~~~~d~Vv~~a~~-~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                       +..  +.+.+.+.++++  |+||++... .......+.+.|.+.++. ||+.++.+.+|
T Consensus       406 ~~~~~I~~en~~~fl~~~--DiVVDa~D~~~~~~rr~l~~~c~~~~IP-~I~ag~~G~~g  462 (989)
T PRK14852        406 SFPEGVAAETIDAFLKDV--DLLVDGIDFFALDIRRRLFNRALELGIP-VITAGPLGYSC  462 (989)
T ss_pred             EEecCCCHHHHHHHhhCC--CEEEECCCCccHHHHHHHHHHHHHcCCC-EEEeeccccCe
Confidence             322  367788888876  999987754 344557788889999985 88888765544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.16  E-value=0.081  Score=41.55  Aligned_cols=89  Identities=20%  Similarity=0.283  Sum_probs=58.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .++++|||+    | .|-+|..=++.|++.|.+|++++...+..+               ..+++...+   +...+.+.
T Consensus         5 l~~~~vlVv----G-gG~va~~k~~~Ll~~gA~v~vis~~~~~~~---------------~~i~~~~~~---~~~~l~~~   61 (103)
T PF13241_consen    5 LKGKRVLVV----G-GGPVAARKARLLLEAGAKVTVISPEIEFSE---------------GLIQLIRRE---FEEDLDGA   61 (103)
T ss_dssp             -TT-EEEEE----E-ESHHHHHHHHHHCCCTBEEEEEESSEHHHH---------------TSCEEEESS----GGGCTTE
T ss_pred             cCCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEECCchhhhh---------------hHHHHHhhh---HHHHHhhh
Confidence            357899999    5 599999999999999999999998751000               133333222   22345554


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                        +.||- +..+-.....+.+.|++.++  +|.+...
T Consensus        62 --~lV~~-at~d~~~n~~i~~~a~~~~i--~vn~~D~   93 (103)
T PF13241_consen   62 --DLVFA-ATDDPELNEAIYADARARGI--LVNVVDD   93 (103)
T ss_dssp             --SEEEE--SS-HHHHHHHHHHHHHTTS--EEEETT-
T ss_pred             --eEEEe-cCCCHHHHHHHHHHHhhCCE--EEEECCC
Confidence              87774 44456667888999998886  6766643

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.13  E-value=0.07  Score=50.00  Aligned_cols=97  Identities=18%  Similarity=0.231  Sum_probs=63.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc-CHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D~~~~~~~~~~~  151 (401)
                      .+++|-|+    |+.| +|+--++...+-|++|++++++..+.++       .+..|.. ...++.- |++-+.++.+..
T Consensus       181 pG~~vgI~----GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkee-------a~~~LGA-d~fv~~~~d~d~~~~~~~~~  247 (360)
T KOG0023|consen  181 PGKWVGIV----GLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEE-------AIKSLGA-DVFVDSTEDPDIMKAIMKTT  247 (360)
T ss_pred             CCcEEEEe----cCcc-cchHHHHHHHHhCcEEEEEeCCchhHHH-------HHHhcCc-ceeEEecCCHHHHHHHHHhh
Confidence            56899999    9988 9999999999999999999999854432       1222222 2222223 666666666554


Q ss_pred             --cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          152 --TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 --~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                        .+|.|.+++-.   ....++..+|..|  ++|+++-
T Consensus       248 dg~~~~v~~~a~~---~~~~~~~~lk~~G--t~V~vg~  280 (360)
T KOG0023|consen  248 DGGIDTVSNLAEH---ALEPLLGLLKVNG--TLVLVGL  280 (360)
T ss_pred             cCcceeeeecccc---chHHHHHHhhcCC--EEEEEeC
Confidence              24555555332   3445566776666  5898884

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.11  E-value=0.073  Score=53.85  Aligned_cols=105  Identities=16%  Similarity=0.213  Sum_probs=69.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCC----------CCCcccchhc----CCCeE-E
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP----------PFNRFNEIVS----AGGKT-V  137 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~----------~~~~~~~l~~----~~~~~-~  137 (401)
                      .+++|=++     |.|.+|+.+++.|+++||+|++.+|+.++.+.+...          ......++..    +++.+ .
T Consensus         5 ~~~~IG~I-----GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~   79 (493)
T PLN02350          5 ALSRIGLA-----GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIIL   79 (493)
T ss_pred             CCCCEEEE-----eeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEE
Confidence            35679999     899999999999999999999999988665543210          0111122221    22222 2


Q ss_pred             EcCHhhHHH----hhcCC-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          138 WGDPAEVGN----VVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       138 ~~D~~~~~~----~~~~~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      ..|.+.++.    ++... +=|+||++.......+..+.+.+++.|+ +||
T Consensus        80 v~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi-~fl  129 (493)
T PLN02350         80 VKAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGL-LYL  129 (493)
T ss_pred             CCCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            223222332    23222 1388999988889999999999999887 466

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.10  E-value=0.093  Score=52.62  Aligned_cols=74  Identities=20%  Similarity=0.270  Sum_probs=51.9

Q ss_pred             ccccCeEEEEecCCCc----------------cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC
Q 015746           71 AAEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG  134 (401)
Q Consensus        71 ~~~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~  134 (401)
                      ...+++||||    +|                ||..|..|++.+..+|++|+.+.-.-. ..             ...++
T Consensus       253 ~l~gkkvLIT----aGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-------------~p~~v  314 (475)
T PRK13982        253 PLAGRRVLIT----AGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-------------DPQGV  314 (475)
T ss_pred             ccCCCEEEEe----cCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-------------CCCCc
Confidence            3578999999    55                699999999999999999999874331 10             01256


Q ss_pred             eEEEcC-HhhHHHhhc-CCcccEEEeCCCC
Q 015746          135 KTVWGD-PAEVGNVVG-GVTFDVVLDNNGK  162 (401)
Q Consensus       135 ~~~~~D-~~~~~~~~~-~~~~d~Vv~~a~~  162 (401)
                      +++..+ ..++.+.+. ..+.|++|++|++
T Consensus       315 ~~i~V~ta~eM~~av~~~~~~Di~I~aAAV  344 (475)
T PRK13982        315 KVIHVESARQMLAAVEAALPADIAIFAAAV  344 (475)
T ss_pred             eEEEecCHHHHHHHHHhhCCCCEEEEeccc
Confidence            666665 444444432 2336999999984

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=95.10  E-value=0.1  Score=52.49  Aligned_cols=103  Identities=13%  Similarity=0.102  Sum_probs=60.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc-cCCCCCCCcccchhcCCCe-EEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~l~~~~~~-~~~~D~~~~~~~~~~~  151 (401)
                      ||||||.     |.|.+|..+++.+.+.|++|++++.+.+... ......  .+-.+ .+... --..|.+.+.++....
T Consensus         2 ~k~iLi~-----g~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~~ad--~~~~~-~~~~~~~~y~d~~~l~~~a~~~   73 (451)
T PRK08591          2 FDKILIA-----NRGEIALRIIRACKELGIKTVAVHSTADRDALHVQLAD--EAVCI-GPAPSKKSYLNIPAIISAAEIT   73 (451)
T ss_pred             cceEEEE-----CCCHHHHHHHHHHHHcCCeEEEEcChhhccCCCHhHCC--EEEEe-CCCCcccccCCHHHHHHHHHHh
Confidence            6899999     7899999999999999999999866543211 000000  00000 00000 0112455666666666


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ++|+|+-..+.-.+. ..+...+++.|++ |+..+
T Consensus        74 ~id~I~p~~~~~~e~-~~~~~~~e~~gi~-~~g~~  106 (451)
T PRK08591         74 GADAIHPGYGFLSEN-ADFAEICEDSGFT-FIGPS  106 (451)
T ss_pred             CCCEEEECCCccccC-HHHHHHHHHCCCc-eECcC
Confidence            789998765422221 1467778888873 55433

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.10  E-value=0.026  Score=50.16  Aligned_cols=111  Identities=18%  Similarity=0.223  Sum_probs=67.2

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ...+|+|+|+    |. |.+|+++++.|.+.|++|++.+++.+....+.        +.  .+...+  |.+   +++. 
T Consensus        25 ~l~gk~v~I~----G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~--------~~--~g~~~v--~~~---~l~~-   83 (200)
T cd01075          25 SLEGKTVAVQ----GL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAA--------EL--FGATVV--APE---EIYS-   83 (200)
T ss_pred             CCCCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HH--cCCEEE--cch---hhcc-
Confidence            4567899999    54 79999999999999999998887764332211        10  033332  322   2322 


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCe
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~  225 (401)
                      .++|+++.++..++....++    ++.+.+ +|.-...        .|++          ....++++.+.|+.+
T Consensus        84 ~~~Dv~vp~A~~~~I~~~~~----~~l~~~-~v~~~AN--------~~~~----------~~~~~~~L~~~Gi~~  135 (200)
T cd01075          84 VDADVFAPCALGGVINDDTI----PQLKAK-AIAGAAN--------NQLA----------DPRHGQMLHERGILY  135 (200)
T ss_pred             ccCCEEEecccccccCHHHH----HHcCCC-EEEECCc--------CccC----------CHhHHHHHHHCCCEE
Confidence            13699998887654444443    334554 4432221        1221          145788999988654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.09  E-value=0.14  Score=48.82  Aligned_cols=66  Identities=26%  Similarity=0.386  Sum_probs=50.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .|+|.|.     |.|.+|..+++.|.+.||+|++.+|+..                            .++.++++++  
T Consensus         4 ~m~I~ii-----G~G~~G~~lA~~l~~~G~~V~~~~r~~~----------------------------~~~~~~~~~a--   48 (308)
T PRK14619          4 PKTIAIL-----GAGAWGSTLAGLASANGHRVRVWSRRSG----------------------------LSLAAVLADA--   48 (308)
T ss_pred             CCEEEEE-----CccHHHHHHHHHHHHCCCEEEEEeCCCC----------------------------CCHHHHHhcC--
Confidence            5789999     7899999999999999999999998752                            1234455555  


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHh
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      |+||-+...  .....+++.+..
T Consensus        49 dvvi~~vp~--~~~~~v~~~l~~   69 (308)
T PRK14619         49 DVIVSAVSM--KGVRPVAEQVQA   69 (308)
T ss_pred             CEEEEECCh--HHHHHHHHHHHH
Confidence            998877653  466666666643

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.05  E-value=0.12  Score=41.68  Aligned_cols=34  Identities=24%  Similarity=0.415  Sum_probs=26.2

Q ss_pred             CeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCC
Q 015746           75 KKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        75 ~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      |+|.|+    |++   +..|..+++.|.++||+|+.+.-..
T Consensus         1 ksiAVv----GaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~   37 (116)
T PF13380_consen    1 KSIAVV----GASDNPGKFGYRVLRNLKAAGYEVYPVNPKG   37 (116)
T ss_dssp             -EEEEE----T--SSTTSHHHHHHHHHHHTT-EEEEESTTC
T ss_pred             CEEEEE----cccCCCCChHHHHHHHHHhCCCEEEEECCCc
Confidence            579999    987   7789999999999999999886544

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.04  E-value=0.13  Score=51.08  Aligned_cols=40  Identities=15%  Similarity=0.253  Sum_probs=35.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      .+|+|.|+     |.|++|..++..|+++||+|+++++++++.+.
T Consensus         2 ~~~kI~VI-----GlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~   41 (415)
T PRK11064          2 SFETISVI-----GLGYIGLPTAAAFASRQKQVIGVDINQHAVDT   41 (415)
T ss_pred             CccEEEEE-----CcchhhHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence            35899999     78999999999999999999999998876554

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.04  E-value=0.057  Score=55.04  Aligned_cols=105  Identities=19%  Similarity=0.201  Sum_probs=62.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCC------CCCccc--chhcC-CCeEEEcCHhhH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP------PFNRFN--EIVSA-GGKTVWGDPAEV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~------~~~~~~--~l~~~-~~~~~~~D~~~~  144 (401)
                      .|+|-|+     |.|.+|..++..|+.+|++|++.+++++....+...      ....+.  .+... ++.+    .+++
T Consensus         4 i~kIavI-----G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~----~~~~   74 (495)
T PRK07531          4 IMKAACI-----GGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF----CASL   74 (495)
T ss_pred             cCEEEEE-----CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe----eCCH
Confidence            3689999     799999999999999999999999987654322100      000000  00000 1221    2345


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecccc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAG  189 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS~~  189 (401)
                      .++++++  |+|+-+...+......++..+.+. ..+.+|-.||.+
T Consensus        75 ~ea~~~a--D~Vieavpe~~~vk~~l~~~l~~~~~~~~iI~SsTsg  118 (495)
T PRK07531         75 AEAVAGA--DWIQESVPERLDLKRRVLAEIDAAARPDALIGSSTSG  118 (495)
T ss_pred             HHHhcCC--CEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence            6677776  999998877765555555444332 222344444433

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.03  E-value=0.074  Score=51.48  Aligned_cols=79  Identities=25%  Similarity=0.274  Sum_probs=50.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc--
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG--  149 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~--  149 (401)
                      ..+++|||.    ||+|.+|++.++-+...|..+++.+++.++.+-.+..        . ..-.+.+.|++-.+...+  
T Consensus       156 ~~g~~vLv~----ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~l--------G-Ad~vvdy~~~~~~e~~kk~~  222 (347)
T KOG1198|consen  156 SKGKSVLVL----GGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKL--------G-ADEVVDYKDENVVELIKKYT  222 (347)
T ss_pred             CCCCeEEEE----eCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHc--------C-CcEeecCCCHHHHHHHHhhc
Confidence            346799999    9999999999999999995555555555544322211        1 122223333333333333  


Q ss_pred             CCcccEEEeCCCCC
Q 015746          150 GVTFDVVLDNNGKN  163 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~  163 (401)
                      +.++|+|++|.+..
T Consensus       223 ~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGS  236 (347)
T ss_pred             CCCccEEEECCCCC
Confidence            34689999999864

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.03  E-value=0.18  Score=48.03  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=63.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc-C---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-D---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D---~~~~~~~~~  149 (401)
                      ..+|||.    |++|.+|..+++.+...|.+|+++++++++.+.++           ..++..+.. +   .+.+... .
T Consensus       147 ~~~vlI~----g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~v~~~~~~~~~~~~~~-~  210 (326)
T cd08289         147 QGPVLVT----GATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-----------KLGAKEVIPREELQEESIKPL-E  210 (326)
T ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-----------HcCCCEEEcchhHHHHHHHhh-c
Confidence            4689999    99999999999999999999999988876543221           113322211 1   1222233 2


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +..+|+|+++.+.  ......++.++..|  ++|.++..
T Consensus       211 ~~~~d~vld~~g~--~~~~~~~~~l~~~G--~~i~~g~~  245 (326)
T cd08289         211 KQRWAGAVDPVGG--KTLAYLLSTLQYGG--SVAVSGLT  245 (326)
T ss_pred             cCCcCEEEECCcH--HHHHHHHHHhhcCC--EEEEEeec
Confidence            3347999999874  34556666666665  68877753

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.00  E-value=0.12  Score=49.43  Aligned_cols=99  Identities=12%  Similarity=0.161  Sum_probs=63.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCC--CCcccCCCCCCCcccchh---cCCCeEEEcCH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGD--ENSDKMKKPPFNRFNEIV---SAGGKTVWGDP  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~l~---~~~~~~~~~D~  141 (401)
                      ..||.|+    |++|.||+.++..|+.+|.       +++.++...  ++......    .+.+..   ..++.+.    
T Consensus         3 p~KV~II----Ga~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~----Dl~~~~~~~~~~~~i~----   70 (323)
T TIGR01759         3 PVRVAVT----GAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAM----ELEDCAFPLLAGVVAT----   70 (323)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHH----HHhhccccccCCcEEe----
Confidence            4689999    9999999999999998874       788888754  22322111    011110   0122222    


Q ss_pred             hhHHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-C-EEEEec
Q 015746          142 AEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-K-QFLFIS  186 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv-~-~~v~~S  186 (401)
                      .+..+.++++  |+||.+||.              |....+.+...+++.+. + .++.+|
T Consensus        71 ~~~~~~~~da--DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        71 TDPEEAFKDV--DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             cChHHHhCCC--CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            1233455666  999999994              46667788888888765 4 444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.98  E-value=0.14  Score=48.41  Aligned_cols=96  Identities=25%  Similarity=0.324  Sum_probs=63.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D----~~~~~~~  147 (401)
                      ...+|+|+    |++|.+|..+++.+...|.+|++++++.++...+..           .++ .++..+    ...+...
T Consensus       144 ~~~~vli~----g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  208 (328)
T cd08268         144 PGDSVLIT----AASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-----------LGAAHVIVTDEEDLVAEVLRI  208 (328)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-----------cCCCEEEecCCccHHHHHHHH
Confidence            35689999    999999999999999999999999887654332111           122 122222    2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+..+|.++++.+.  ......++.++..|  +++.++.
T Consensus       209 ~~~~~~d~vi~~~~~--~~~~~~~~~l~~~g--~~v~~g~  244 (328)
T cd08268         209 TGGKGVDVVFDPVGG--PQFAKLADALAPGG--TLVVYGA  244 (328)
T ss_pred             hCCCCceEEEECCch--HhHHHHHHhhccCC--EEEEEEe
Confidence            444458999998875  44556666665555  6887764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.98  E-value=0.42  Score=42.47  Aligned_cols=104  Identities=15%  Similarity=0.157  Sum_probs=61.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecC---CCCcccCCC--CCC---------CcccchhcCCCeEE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVG---DENSDKMKK--PPF---------NRFNEIVSAGGKTV  137 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~---~~~~~~~~~--~~~---------~~~~~l~~~~~~~~  137 (401)
                      ..++|+|+    | .|.+|+.+++.|...|. +|++++++   ..+......  ...         ..+..+. +.+++.
T Consensus        20 ~~~~V~Iv----G-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~in-p~~~i~   93 (200)
T TIGR02354        20 EQATVAIC----G-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEIN-PYTEIE   93 (200)
T ss_pred             hCCcEEEE----C-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHC-CCCEEE
Confidence            45789999    5 57799999999999998 69999988   443332110  000         0000111 223322


Q ss_pred             E--c--CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHh-CCCCEEEEe
Q 015746          138 W--G--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFI  185 (401)
Q Consensus       138 ~--~--D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~-~gv~~~v~~  185 (401)
                      .  .  +.+.+.+++.++  |+||.+ .-|...-..+.+.+.+ .+.+.++..
T Consensus        94 ~~~~~i~~~~~~~~~~~~--DlVi~a-~Dn~~~k~~l~~~~~~~~~~~~ii~~  143 (200)
T TIGR02354        94 AYDEKITEENIDKFFKDA--DIVCEA-FDNAEAKAMLVNAVLEKYKDKYLIAA  143 (200)
T ss_pred             EeeeeCCHhHHHHHhcCC--CEEEEC-CCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            2  2  356677778775  999999 4455544455555544 344444543

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=94.90  E-value=0.23  Score=47.31  Aligned_cols=98  Identities=21%  Similarity=0.224  Sum_probs=63.7

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-cCHhhHHHhhcCCc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGGVT  152 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~~~~~~~~~~  152 (401)
                      ||.|+    |++|.||..++..|+.++.  +++.+++.+.....+      .+.+.. ....+.. .+.+++.+.++++ 
T Consensus         1 KV~Ii----GaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~------DL~~~~-~~~~i~~~~~~~~~~~~~~da-   68 (312)
T TIGR01772         1 KVAVL----GAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAA------DLSHIP-TAASVKGFSGEEGLENALKGA-   68 (312)
T ss_pred             CEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEc------hhhcCC-cCceEEEecCCCchHHHcCCC-
Confidence            68999    9999999999999998875  788888766221111      111111 1122221 1223455677887 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCE-EEEec
Q 015746          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (401)
Q Consensus       153 ~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~-~v~~S  186 (401)
                       |+||-++|.              |....+.+.+...+.+.+- +|.+|
T Consensus        69 -DivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        69 -DVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             -CEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence             999999984              5667778888887776553 44444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=94.88  E-value=0.13  Score=48.65  Aligned_cols=39  Identities=23%  Similarity=0.451  Sum_probs=34.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      |++|-|+     |.|.+|..+++.|++.||+|++.+|++++...
T Consensus         1 m~~Ig~I-----GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~   39 (296)
T PRK15461          1 MAAIAFI-----GLGQMGSPMASNLLKQGHQLQVFDVNPQAVDA   39 (296)
T ss_pred             CCeEEEE-----eeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            3589999     79999999999999999999999998765543

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=94.88  E-value=0.18  Score=47.38  Aligned_cols=97  Identities=22%  Similarity=0.285  Sum_probs=61.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~~  147 (401)
                      .+.+|+|+    |++|.+|..+++.+...|.+|++++++.++.+.+.           ..++. ++...    .+.+.+.
T Consensus       139 ~~~~vlv~----g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  203 (323)
T cd05276         139 AGETVLIH----GGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-----------ALGADVAINYRTEDFAEEVKEA  203 (323)
T ss_pred             CCCEEEEE----cCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----------HcCCCEEEeCCchhHHHHHHHH
Confidence            45799999    99999999999999999999999888764332111           11221 12212    2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+.++|.++++.+...  ....++.....|  +++.++..
T Consensus       204 ~~~~~~d~vi~~~g~~~--~~~~~~~~~~~g--~~i~~~~~  240 (323)
T cd05276         204 TGGRGVDVILDMVGGDY--LARNLRALAPDG--RLVLIGLL  240 (323)
T ss_pred             hCCCCeEEEEECCchHH--HHHHHHhhccCC--EEEEEecC
Confidence            44445899999988432  334445444444  67777643

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=94.87  E-value=0.16  Score=48.61  Aligned_cols=97  Identities=21%  Similarity=0.238  Sum_probs=66.3

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ....++|+|+    |.. .+|...++.+...|.+|++++|++++.+..++        +. ....+...|.+....+-+.
T Consensus       164 ~~pG~~V~I~----G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~--------lG-Ad~~i~~~~~~~~~~~~~~  229 (339)
T COG1064         164 VKPGKWVAVV----GAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK--------LG-ADHVINSSDSDALEAVKEI  229 (339)
T ss_pred             CCCCCEEEEE----CCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH--------hC-CcEEEEcCCchhhHHhHhh
Confidence            3446899999    665 89999999999999999999999987643211        11 1122222245545554443


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                        +|+|+++++  -....+.+++++..|  +++.++=
T Consensus       230 --~d~ii~tv~--~~~~~~~l~~l~~~G--~~v~vG~  260 (339)
T COG1064         230 --ADAIIDTVG--PATLEPSLKALRRGG--TLVLVGL  260 (339)
T ss_pred             --CcEEEECCC--hhhHHHHHHHHhcCC--EEEEECC
Confidence              699999998  455666777777776  5887773

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.78  E-value=0.12  Score=49.90  Aligned_cols=96  Identities=15%  Similarity=0.287  Sum_probs=61.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-cCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~~~~~~~~  150 (401)
                      ...+|+|+    |+ |-+|...++.+...|. +|+++++++++.+..+           ..+.+.+. .+.+++.+....
T Consensus       169 ~g~~VlV~----G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-----------~lGa~~vi~~~~~~~~~~~~~  232 (343)
T PRK09880        169 QGKRVFVS----GV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-----------EMGADKLVNPQNDDLDHYKAE  232 (343)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-----------HcCCcEEecCCcccHHHHhcc
Confidence            35789999    86 9999999999999998 6888888775543221           12332221 112223333332


Q ss_pred             C-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          151 V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       151 ~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      . .+|+||++.|.. ......++.++..|  ++|.++.
T Consensus       233 ~g~~D~vid~~G~~-~~~~~~~~~l~~~G--~iv~~G~  267 (343)
T PRK09880        233 KGYFDVSFEVSGHP-SSINTCLEVTRAKG--VMVQVGM  267 (343)
T ss_pred             CCCCCEEEECCCCH-HHHHHHHHHhhcCC--EEEEEcc
Confidence            2 379999998853 23455666666655  6887763

>PRK08462 biotin carboxylase; Validated

Probab=94.78  E-value=0.16  Score=51.12  Aligned_cols=105  Identities=15%  Similarity=0.147  Sum_probs=64.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc-CCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .++||||.     +.|.++-.+++.+.+.|++|+++....+.... +....  +.-.+......-...|.+.+-++.+..
T Consensus         3 ~~k~ili~-----~~g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~~~~~ad--~~~~~~~~~~~~~y~~~~~l~~~~~~~   75 (445)
T PRK08462          3 EIKRILIA-----NRGEIALRAIRTIQEMGKEAIAIYSTADKDALYLKYAD--AKICIGGAKSSESYLNIPAIISAAEIF   75 (445)
T ss_pred             CCCEEEEE-----CCcHHHHHHHHHHHHcCCCEEEEechhhcCCchhhhCC--EEEEeCCCchhcccCCHHHHHHHHHHc
Confidence            37899999     78999999999999999999998765543211 11000  000000000000223566777777777


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ++|+|+-..+. +.....+.+.|++.|++ |+-.|
T Consensus        76 ~~D~i~pg~g~-lse~~~~a~~~e~~Gi~-~~g~~  108 (445)
T PRK08462         76 EADAIFPGYGF-LSENQNFVEICSHHNIK-FIGPS  108 (445)
T ss_pred             CCCEEEECCCc-cccCHHHHHHHHHCCCe-EECcC
Confidence            89999987653 22235566788888873 55433

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.77  E-value=0.16  Score=48.25  Aligned_cols=102  Identities=18%  Similarity=0.144  Sum_probs=59.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~  150 (401)
                      +|+||.|+    ||+||.|..|++.|..+. .++...+-+.....++..    .+..+.. ....+..-|.+.+  ...+
T Consensus         1 ~~~kV~Iv----GasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~----~~p~l~g~~~l~~~~~~~~~~--~~~~   70 (349)
T COG0002           1 MMIKVGIV----GASGYTGLELLRLLAGHPDVELILISSRERAGKPVSD----VHPNLRGLVDLPFQTIDPEKI--ELDE   70 (349)
T ss_pred             CCceEEEE----cCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHH----hCcccccccccccccCChhhh--hccc
Confidence            47899999    999999999999999884 365555433322222211    1111110 0122222233333  2333


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                        +|+||-+...  .....++....+.|++ +|=+|...
T Consensus        71 --~DvvFlalPh--g~s~~~v~~l~~~g~~-VIDLSadf  104 (349)
T COG0002          71 --CDVVFLALPH--GVSAELVPELLEAGCK-VIDLSADF  104 (349)
T ss_pred             --CCEEEEecCc--hhHHHHHHHHHhCCCe-EEECCccc
Confidence              4999987653  4455666777677774 88888743

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.76  E-value=0.075  Score=50.41  Aligned_cols=103  Identities=22%  Similarity=0.227  Sum_probs=60.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC---Ccccchhc----CCCeEEEc-CHhhHHH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEIVS----AGGKTVWG-DPAEVGN  146 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~l~~----~~~~~~~~-D~~~~~~  146 (401)
                      |+|-++     |.|.+|+.+++.|++.|++|++.+|++++...+.....   ....++..    .++-++-. |.+.+..
T Consensus         1 m~Ig~I-----GlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~   75 (299)
T PRK12490          1 MKLGLI-----GLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTES   75 (299)
T ss_pred             CEEEEE-----cccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHH
Confidence            478999     69999999999999999999999998755433221110   01112111    01211111 2222222


Q ss_pred             h----hcCCc-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          147 V----VGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       147 ~----~~~~~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +    ....+ =.+||++.......++.+.+.+++.|+ +||
T Consensus        76 v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~-~~v  116 (299)
T PRK12490         76 VIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGI-HYV  116 (299)
T ss_pred             HHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCC-eEE
Confidence            2    22221 257778877777777777777777775 344

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.76  E-value=0.047  Score=51.29  Aligned_cols=98  Identities=15%  Similarity=0.214  Sum_probs=59.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcC-------------CCeEEEcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-------------GGKTVWGD  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~D  140 (401)
                      +++|.|+     |.|.+|..++..|+.+|++|++++++++........-...+..+...             ++.+ ..|
T Consensus         3 ~~kI~VI-----G~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~-~~~   76 (282)
T PRK05808          3 IQKIGVI-----GAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG-TTD   76 (282)
T ss_pred             ccEEEEE-----ccCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE-eCC
Confidence            4689999     56999999999999999999999988765421000000000011111             1111 122


Q ss_pred             HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEE
Q 015746          141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (401)
Q Consensus       141 ~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v  183 (401)
                         +. .+.++  |+||-+...+......++..+.+. ....+|
T Consensus        77 ---~~-~~~~a--DlVi~av~e~~~~k~~~~~~l~~~~~~~~il  114 (282)
T PRK05808         77 ---LD-DLKDA--DLVIEAATENMDLKKKIFAQLDEIAKPEAIL  114 (282)
T ss_pred             ---HH-HhccC--CeeeecccccHHHHHHHHHHHHhhCCCCcEE
Confidence               22 24554  999999887777777777766553 333455

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.75  E-value=0.29  Score=46.55  Aligned_cols=109  Identities=22%  Similarity=0.266  Sum_probs=69.9

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCe--EEE
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGK--TVW  138 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~--~~~  138 (401)
                      +|||+    | .|.+|..+++.|...|. ++++++.+.-....+..+-..+..++.              .+.++  ...
T Consensus         1 kVlIV----G-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~   75 (312)
T cd01489           1 KVLVV----G-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYH   75 (312)
T ss_pred             CEEEE----C-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEe
Confidence            58999    5 58999999999999996 688888766443333322111111111              12333  333


Q ss_pred             cCHh---hHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          139 GDPA---EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       139 ~D~~---~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      .+..   .....+++.  |+||.+.. +...-..+-+.|+..++. ||..++.+.+|.
T Consensus        76 ~~i~~~~~~~~f~~~~--DvVv~a~D-n~~ar~~in~~c~~~~ip-~I~~gt~G~~G~  129 (312)
T cd01489          76 ANIKDPDFNVEFFKQF--DLVFNALD-NLAARRHVNKMCLAADVP-LIESGTTGFLGQ  129 (312)
T ss_pred             ccCCCccchHHHHhcC--CEEEECCC-CHHHHHHHHHHHHHCCCC-EEEEecCcceeE
Confidence            3322   123556664  99998864 567777788899999975 999888887664

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.75  E-value=0.094  Score=49.19  Aligned_cols=36  Identities=31%  Similarity=0.393  Sum_probs=32.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r  110 (401)
                      ...+++|+|+    |.+|.+|+.++..|+++|..|+++.|
T Consensus       156 ~l~Gk~vvVi----G~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        156 ELAGKHAVVV----GRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCCCCEEEEE----CCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            4567899999    99999999999999999999988876

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.74  E-value=0.064  Score=50.66  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=33.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      .++|.|+     |.|.+|..++..|+.+|++|++.+++++..+
T Consensus         4 ~~kI~vI-----GaG~mG~~iA~~la~~G~~V~l~d~~~~~~~   41 (292)
T PRK07530          4 IKKVGVI-----GAGQMGNGIAHVCALAGYDVLLNDVSADRLE   41 (292)
T ss_pred             CCEEEEE-----CCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4789999     5799999999999999999999999876543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=94.73  E-value=0.18  Score=47.42  Aligned_cols=97  Identities=16%  Similarity=0.240  Sum_probs=61.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EE-cC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VW-GD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~D---~~~~~~~  147 (401)
                      .+++|+|+    |++|.+|..+++.+...|.+|++++++.++.+.+.           ..++.. +. .+   ...+...
T Consensus       144 ~g~~vlI~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  208 (325)
T cd08253         144 AGETVLVH----GGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-----------QAGADAVFNYRAEDLADRILAA  208 (325)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeCCCcCHHHHHHHH
Confidence            45799999    99999999999999999999999988765433211           112211 11 11   2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+.++|.|+++++..  ......+.....|  +|+.+++.
T Consensus       209 ~~~~~~d~vi~~~~~~--~~~~~~~~l~~~g--~~v~~~~~  245 (325)
T cd08253         209 TAGQGVDVIIEVLANV--NLAKDLDVLAPGG--RIVVYGSG  245 (325)
T ss_pred             cCCCceEEEEECCchH--HHHHHHHhhCCCC--EEEEEeec
Confidence            4444689999998742  2333344443333  68887764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.73  E-value=0.15  Score=48.28  Aligned_cols=37  Identities=24%  Similarity=0.373  Sum_probs=32.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~  115 (401)
                      +|+|.|+     |.|.+|..+++.|.+.|++|.+.+|++++.
T Consensus         2 ~~~Igvi-----G~G~mG~~~a~~l~~~g~~v~~~d~~~~~~   38 (296)
T PRK11559          2 TMKVGFI-----GLGIMGKPMSKNLLKAGYSLVVYDRNPEAV   38 (296)
T ss_pred             CceEEEE-----ccCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            5789999     589999999999999999999999887544

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.72  E-value=0.17  Score=49.07  Aligned_cols=99  Identities=18%  Similarity=0.236  Sum_probs=59.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      .+.+|+|+    |+ |-+|...++.+...|.+|++++|......        ++..+...+++.+..+.+++.+.....+
T Consensus       172 ~g~~vlI~----G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~--------~~~~~~~~Ga~~v~~~~~~~~~~~~~~~  238 (355)
T cd08230         172 NPRRALVL----GA-GPIGLLAALLLRLRGFEVYVLNRRDPPDP--------KADIVEELGATYVNSSKTPVAEVKLVGE  238 (355)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCeEEEEecCCCCHH--------HHHHHHHcCCEEecCCccchhhhhhcCC
Confidence            45789999    86 99999999988889999999998431111        1111222244433222222221111234


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +|+||++.|... .....++.++..|  +++.++.
T Consensus       239 ~d~vid~~g~~~-~~~~~~~~l~~~G--~~v~~G~  270 (355)
T cd08230         239 FDLIIEATGVPP-LAFEALPALAPNG--VVILFGV  270 (355)
T ss_pred             CCEEEECcCCHH-HHHHHHHHccCCc--EEEEEec
Confidence            799999998532 3444556665555  5776664

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.70  E-value=0.21  Score=45.69  Aligned_cols=97  Identities=21%  Similarity=0.373  Sum_probs=61.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D---~~~~~~~  147 (401)
                      .+.+|||+    |+++ +|+.+++.+...|.+|+++++++++.+.+..           .+.. ++. .+   .+.+. .
T Consensus       134 ~~~~vli~----g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~-~  196 (271)
T cd05188         134 PGDTVLVL----GAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-----------LGADHVIDYKEEDLEEELR-L  196 (271)
T ss_pred             CCCEEEEE----CCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-----------hCCceeccCCcCCHHHHHH-H
Confidence            45789999    9999 9999999999999999999887644322111           1111 111 11   12222 2


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ..+..+|+|+++++.. .....+++.++..|  +++.++...
T Consensus       197 ~~~~~~d~vi~~~~~~-~~~~~~~~~l~~~G--~~v~~~~~~  235 (271)
T cd05188         197 TGGGGADVVIDAVGGP-ETLAQALRLLRPGG--RIVVVGGTS  235 (271)
T ss_pred             hcCCCCCEEEECCCCH-HHHHHHHHhcccCC--EEEEEccCC
Confidence            2334589999998742 34555666665554  688877643

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.65  E-value=0.073  Score=52.05  Aligned_cols=98  Identities=19%  Similarity=0.224  Sum_probs=62.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ...+|+|+    |+ |-+|...++.|...|.+|++++|+.++...+.        ......+.....+.+++.+.+.++ 
T Consensus       166 ~~~~VlVi----Ga-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~--------~~~g~~v~~~~~~~~~l~~~l~~a-  231 (370)
T TIGR00518       166 EPGDVTII----GG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD--------AEFGGRIHTRYSNAYEIEDAVKRA-  231 (370)
T ss_pred             CCceEEEE----cC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH--------HhcCceeEeccCCHHHHHHHHccC-
Confidence            34679999    65 89999999999999999999998765432111        000011222233567788888776 


Q ss_pred             ccEEEeCCCC-----ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~-----~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       |+||++...     ....+...++.++..  ..||-++.
T Consensus       232 -DvVI~a~~~~g~~~p~lit~~~l~~mk~g--~vIvDva~  268 (370)
T TIGR00518       232 -DLLIGAVLIPGAKAPKLVSNSLVAQMKPG--AVIVDVAI  268 (370)
T ss_pred             -CEEEEccccCCCCCCcCcCHHHHhcCCCC--CEEEEEec
Confidence             999998742     111234455544333  24776774

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.65  E-value=0.2  Score=47.70  Aligned_cols=98  Identities=17%  Similarity=0.172  Sum_probs=64.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcCH----hhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDP----AEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~----~~~~~~  147 (401)
                      .+.+|+|.    |++|-+|+.+++.+...|.+|++++++.++.+.+.           ..++ .++..+.    ..+...
T Consensus       139 ~~~~vlI~----ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~v~~~~~~~~~~~~~~~  203 (329)
T cd08250         139 SGETVLVT----AAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-----------SLGCDRPINYKTEDLGEVLKKE  203 (329)
T ss_pred             CCCEEEEE----eCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-----------HcCCceEEeCCCccHHHHHHHh
Confidence            45789999    99999999999999999999999988765433211           1122 1222221    223332


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~v  190 (401)
                      . +..+|.|+++.+.  ......++.++..|  +||.+++...
T Consensus       204 ~-~~~vd~v~~~~g~--~~~~~~~~~l~~~g--~~v~~g~~~~  241 (329)
T cd08250         204 Y-PKGVDVVYESVGG--EMFDTCVDNLALKG--RLIVIGFISG  241 (329)
T ss_pred             c-CCCCeEEEECCcH--HHHHHHHHHhccCC--eEEEEecccC
Confidence            2 2347999999873  45556666665555  6888876543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.65  E-value=0.03  Score=53.35  Aligned_cols=95  Identities=17%  Similarity=0.223  Sum_probs=56.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-----EEEcCHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-----TVWGDPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~D~~~~~~~~  148 (401)
                      .++|.|+     |.|.+|..++..|+..|++|++++++.+...............+...++.     -+.. ..+...++
T Consensus         4 ~~~I~vI-----GaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~   77 (311)
T PRK06130          4 IQNLAII-----GAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM-EAGLAAAV   77 (311)
T ss_pred             ccEEEEE-----CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE-eCCHHHHh
Confidence            4689999     56999999999999999999999987755433211000000000000000     0000 12344556


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      +++  |+||-+...+......++..+..
T Consensus        78 ~~a--DlVi~av~~~~~~~~~v~~~l~~  103 (311)
T PRK06130         78 SGA--DLVIEAVPEKLELKRDVFARLDG  103 (311)
T ss_pred             ccC--CEEEEeccCcHHHHHHHHHHHHH
Confidence            665  99999887666556666655544

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.64  E-value=0.24  Score=48.12  Aligned_cols=96  Identities=16%  Similarity=0.235  Sum_probs=61.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcC----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~~~~  146 (401)
                      .+.+|||.    |+ |-+|...++.+...|.+ |+++++++++.+.+           ...+.+. +...    .+.+.+
T Consensus       176 ~g~~VlV~----G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-----------~~~Ga~~~i~~~~~~~~~~i~~  239 (358)
T TIGR03451       176 RGDSVAVI----GC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-----------REFGATHTVNSSGTDPVEAIRA  239 (358)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-----------HHcCCceEEcCCCcCHHHHHHH
Confidence            46799999    86 99999999999999985 88888877544321           1123322 2111    233444


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +..+.++|+||++.|.. ......++.++..|  ++|.++.
T Consensus       240 ~~~~~g~d~vid~~g~~-~~~~~~~~~~~~~G--~iv~~G~  277 (358)
T TIGR03451       240 LTGGFGADVVIDAVGRP-ETYKQAFYARDLAG--TVVLVGV  277 (358)
T ss_pred             HhCCCCCCEEEECCCCH-HHHHHHHHHhccCC--EEEEECC
Confidence            44444589999998853 23444566666665  6887764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.62  E-value=0.15  Score=50.43  Aligned_cols=90  Identities=17%  Similarity=0.144  Sum_probs=58.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|.     |.|.||..+++.+...|.+|+++++++.+...           ....+++.+  +   +.+++.++
T Consensus       200 l~GktVvVi-----G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~-----------A~~~G~~~~--~---~~e~v~~a  258 (413)
T cd00401         200 IAGKVAVVA-----GYGDVGKGCAQSLRGQGARVIVTEVDPICALQ-----------AAMEGYEVM--T---MEEAVKEG  258 (413)
T ss_pred             CCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEECChhhHHH-----------HHhcCCEEc--c---HHHHHcCC
Confidence            357899999     78899999999999999999998887754321           111244333  2   23455554


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                        |+||.+.|..-......++.++..+  .++.++
T Consensus       259 --DVVI~atG~~~~i~~~~l~~mk~Gg--ilvnvG  289 (413)
T cd00401         259 --DIFVTTTGNKDIITGEHFEQMKDGA--IVCNIG  289 (413)
T ss_pred             --CEEEECCCCHHHHHHHHHhcCCCCc--EEEEeC
Confidence              9999988743222223344444433  577777

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.59  E-value=0.29  Score=47.57  Aligned_cols=93  Identities=16%  Similarity=0.226  Sum_probs=55.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCe---EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc-CHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~---V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D~~~~~~~~  148 (401)
                      |++|-|+    ||||++|+.+++.|+++ ...   ++.+..... ....        ..+......+... |.++    +
T Consensus         1 m~~VAIV----GATG~vG~ell~llL~~~~f~~~~l~~~ss~~s-g~~~--------~~f~g~~~~v~~~~~~~~----~   63 (369)
T PRK06598          1 MKKVGFV----GWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQA-GGAA--------PSFGGKEGTLQDAFDIDA----L   63 (369)
T ss_pred             CeEEEEE----eCCCHHHHHHHHHHHhCCCCCcCcEEEecchhh-CCcc--------cccCCCcceEEecCChhH----h
Confidence            4789999    99999999999966655 555   555444321 1111        1111111222211 2222    3


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v~~SS  187 (401)
                      .+  +|+||.+++.  .....+...+.+.|++ .+|=.||
T Consensus        64 ~~--~Divf~a~~~--~~s~~~~~~~~~aG~~~~VID~Ss   99 (369)
T PRK06598         64 KK--LDIIITCQGG--DYTNEVYPKLRAAGWQGYWIDAAS   99 (369)
T ss_pred             cC--CCEEEECCCH--HHHHHHHHHHHhCCCCeEEEECCh
Confidence            44  4999998874  4667778877788864 3555555

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=94.57  E-value=0.34  Score=45.11  Aligned_cols=97  Identities=21%  Similarity=0.198  Sum_probs=58.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEec-CCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      |++|.|+    |++|.+|+.+++.+.+. +.+++++.. ..+..... .  ...+......++. +..|.+.+   .  .
T Consensus         1 ~ikV~Ii----Ga~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~-~--~~~~~~~~~~gv~-~~~d~~~l---~--~   67 (266)
T TIGR00036         1 TIKVAVA----GAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGT-D--AGELAGIGKVGVP-VTDDLEAV---E--T   67 (266)
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCC-C--HHHhcCcCcCCce-eeCCHHHh---c--C
Confidence            4799999    99999999999999974 788777553 33211000 0  0000000001222 22344444   2  2


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      .+|+||.+..  ......++..|.+.|+ ++|--+
T Consensus        68 ~~DvVIdfT~--p~~~~~~~~~al~~g~-~vVigt   99 (266)
T TIGR00036        68 DPDVLIDFTT--PEGVLNHLKFALEHGV-RLVVGT   99 (266)
T ss_pred             CCCEEEECCC--hHHHHHHHHHHHHCCC-CEEEEC
Confidence            3699999884  5777788888889986 455433

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.57  E-value=0.13  Score=50.95  Aligned_cols=68  Identities=19%  Similarity=0.217  Sum_probs=48.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|+    | .|.||+.+++.|...|.+|+++++++.+....           ...+.++.  +   +.++++++
T Consensus       210 l~Gk~VlVi----G-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-----------~~~G~~v~--~---l~eal~~a  268 (425)
T PRK05476        210 IAGKVVVVA----G-YGDVGKGCAQRLRGLGARVIVTEVDPICALQA-----------AMDGFRVM--T---MEEAAELG  268 (425)
T ss_pred             CCCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-----------HhcCCEec--C---HHHHHhCC
Confidence            357899999    5 69999999999999999999999887543211           11133322  2   44556655


Q ss_pred             cccEEEeCCCC
Q 015746          152 TFDVVLDNNGK  162 (401)
Q Consensus       152 ~~d~Vv~~a~~  162 (401)
                        |+||.+.|.
T Consensus       269 --DVVI~aTG~  277 (425)
T PRK05476        269 --DIFVTATGN  277 (425)
T ss_pred             --CEEEECCCC
Confidence              999998763

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.57  E-value=0.34  Score=44.11  Aligned_cols=109  Identities=18%  Similarity=0.204  Sum_probs=68.6

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCC--eEEE
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGG--KTVW  138 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~--~~~~  138 (401)
                      +|||+     |.|.+|..+++.|...|. ++++++.+.-....+.++-..+-.++.              .+.+  +...
T Consensus         1 kVlvv-----G~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~   75 (234)
T cd01484           1 KVLLV-----GAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQ   75 (234)
T ss_pred             CEEEE-----CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEe
Confidence            58999     588899999999999996 688888766333333222111111111              1223  3333


Q ss_pred             cCH---hhH-HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          139 GDP---AEV-GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       139 ~D~---~~~-~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      .+.   .+. ...+++  +|+||.+.. |+..-..+-+.|.+.++. ||..++.+.+|.
T Consensus        76 ~~i~~~~~~~~~f~~~--~DvVi~a~D-n~~aR~~ln~~c~~~~ip-lI~~g~~G~~G~  130 (234)
T cd01484          76 NKVGPEQDFNDTFFEQ--FHIIVNALD-NIIARRYVNGMLIFLIVP-LIESGTEGFKGN  130 (234)
T ss_pred             ccCChhhhchHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCCC-EEEEcccCCceE
Confidence            332   222 345555  499998755 566666778889999874 888888776664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.56  E-value=0.22  Score=47.19  Aligned_cols=96  Identities=24%  Similarity=0.271  Sum_probs=64.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~~  148 (401)
                      ..+|+|+    |++|-+|..+++.+...|.+|++++++.++...+           ...++. ++.. +   .+.+.+..
T Consensus       143 ~~~vlI~----g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~  207 (324)
T cd08244         143 GDVVLVT----AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-----------RALGADVAVDYTRPDWPDQVREAL  207 (324)
T ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCCEEEecCCccHHHHHHHHc
Confidence            5689999    9999999999999999999999998877543321           111222 2221 2   23344444


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      .+.++|.|+++.+..  .....++.++..|  ++|.++..
T Consensus       208 ~~~~~d~vl~~~g~~--~~~~~~~~l~~~g--~~v~~g~~  243 (324)
T cd08244         208 GGGGVTVVLDGVGGA--IGRAALALLAPGG--RFLTYGWA  243 (324)
T ss_pred             CCCCceEEEECCChH--hHHHHHHHhccCc--EEEEEecC
Confidence            444589999998853  3456666665555  68887653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.55  E-value=0.14  Score=48.74  Aligned_cols=102  Identities=19%  Similarity=0.206  Sum_probs=60.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ||||.|+    |+ |.+|..++..|+..|. +|++++++++......... ..-.........+..  ..++. .+.++ 
T Consensus         2 ~~KI~VI----Ga-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl-~~~~~~~~~~~~i~~--~~d~~-~~~~a-   71 (307)
T PRK06223          2 RKKISII----GA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI-AEAAPVEGFDTKITG--TNDYE-DIAGS-   71 (307)
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH-HhhhhhcCCCcEEEe--CCCHH-HHCCC-
Confidence            5899999    87 9999999999999876 8999999776543211100 000000001122221  12233 35676 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       153 ~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                       |+||.+++.              |....+.+++.+.+...+ .+|.++
T Consensus        72 -DiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         72 -DVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             -CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             999998863              345556666666666544 355554

>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed

Probab=94.55  E-value=0.28  Score=54.83  Aligned_cols=95  Identities=24%  Similarity=0.222  Sum_probs=61.6

Q ss_pred             ccCeEEEEecCCCcccc-chH---------HHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHh
Q 015746           73 EKKKVLIVNTNSGGHAV-IGF---------YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA  142 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~-iG~---------~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~  142 (401)
                      .+++|||+    |+..+ ||+         ++++.|.+.||+|++++.+++....       .+. .. ....+...+.+
T Consensus       554 ~~kkvLIl----G~G~~rig~~~efdy~~v~~~~aLk~~G~~vI~vn~npetvs~-------~~~-~a-D~~y~ep~~~e  620 (1068)
T PRK12815        554 EKKKVLIL----GSGPIRIGQGIEFDYSSVHAAFALKKEGYETIMINNNPETVST-------DYD-TA-DRLYFEPLTLE  620 (1068)
T ss_pred             CCceEEEe----cccccccccccccchhHHHHHHHHHHcCCEEEEEeCCcccccc-------ccc-cC-ceEEEccCCHH
Confidence            46899999    87654 665         4599999999999999988754321       000 00 11122223467


Q ss_pred             hHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      ++.++++..++|.||-..+.  ....++.+.+.+.|++ ++
T Consensus       621 ~vl~I~~~e~~dgVI~~~g~--~~~~~la~~le~~Gi~-il  658 (1068)
T PRK12815        621 DVLNVAEAENIKGVIVQFGG--QTAINLAKGLEEAGLT-IL  658 (1068)
T ss_pred             HHHHHHhhcCCCEEEEecCc--HHHHHHHHHHHHCCCe-EE
Confidence            78888888889999864332  1345667777778873 44

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=94.47  E-value=0.051  Score=51.40  Aligned_cols=92  Identities=14%  Similarity=0.143  Sum_probs=55.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcC------------CCeEEEcCH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA------------GGKTVWGDP  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~D~  141 (401)
                      .++|.|+     |.|.+|..++..|+..|++|++.+++.+..+.....-...+..+...            +......| 
T Consensus         4 ~~~V~vI-----G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-   77 (295)
T PLN02545          4 IKKVGVV-----GAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTN-   77 (295)
T ss_pred             cCEEEEE-----CCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCC-
Confidence            4689999     67999999999999999999999998765431100000000001000            11111111 


Q ss_pred             hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                        . +.++++  |+||-+...+......++..+.+
T Consensus        78 --~-~~~~~a--D~Vieav~e~~~~k~~v~~~l~~  107 (295)
T PLN02545         78 --L-EELRDA--DFIIEAIVESEDLKKKLFSELDR  107 (295)
T ss_pred             --H-HHhCCC--CEEEEcCccCHHHHHHHHHHHHh
Confidence              2 235665  99999887766666666665444

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=94.46  E-value=0.38  Score=47.80  Aligned_cols=112  Identities=21%  Similarity=0.272  Sum_probs=70.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC---------------cccchhcCCC-
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGG-  134 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~---------------~~~~l~~~~~-  134 (401)
                      .+..+|||+    |++| +|..+++.|.-.|. .+++++.+.-....+..+-+.               .+.++. +.+ 
T Consensus        18 L~~s~Vlli----G~gg-lGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLN-p~V~   91 (425)
T cd01493          18 LESAHVCLL----NATA-TGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELN-PDVN   91 (425)
T ss_pred             HhhCeEEEE----cCcH-HHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHC-CCCE
Confidence            345789999    7665 99999999999996 688887654222221111000               111222 334 


Q ss_pred             -eEEEcCHhh----HHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          135 -KTVWGDPAE----VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       135 -~~~~~D~~~----~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                       +++..+++.    ....+..  +|+||.+. .+......+.+.|++.+++ ||+++|.+.||.
T Consensus        92 i~~~~e~~~~ll~~~~~f~~~--fdiVI~t~-~~~~~~~~L~~~c~~~~iP-lI~~~s~G~~G~  151 (425)
T cd01493          92 GSAVEESPEALLDNDPSFFSQ--FTVVIATN-LPESTLLRLADVLWSANIP-LLYVRSYGLYGY  151 (425)
T ss_pred             EEEEecccchhhhhHHHHhcC--CCEEEECC-CCHHHHHHHHHHHHHcCCC-EEEEecccCEEE
Confidence             333333332    2344555  49998653 3455666788899999985 999999999884

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.45  E-value=0.4  Score=45.72  Aligned_cols=76  Identities=14%  Similarity=0.190  Sum_probs=53.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|.|+     |.|.||+.+++.|..-|++|++.+|..+...                ++..+ ...+++++++.++
T Consensus       134 l~g~tvgIv-----G~G~IG~~vA~~l~afG~~V~~~~~~~~~~~----------------~~~~~-~~~~~l~e~l~~a  191 (312)
T PRK15469        134 REDFTIGIL-----GAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP----------------GVQSF-AGREELSAFLSQT  191 (312)
T ss_pred             cCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC----------------Cceee-cccccHHHHHhcC
Confidence            456899999     8999999999999999999999988653221                11111 1245688888877


Q ss_pred             cccEEEeCCCCChhhHHHHHH
Q 015746          152 TFDVVLDNNGKNLDAVRPVAD  172 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~  172 (401)
                        |+|+.+...+ ..+.+++.
T Consensus       192 --Dvvv~~lPlt-~~T~~li~  209 (312)
T PRK15469        192 --RVLINLLPNT-PETVGIIN  209 (312)
T ss_pred             --CEEEECCCCC-HHHHHHhH
Confidence              8888766542 23444443

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=94.43  E-value=0.15  Score=49.46  Aligned_cols=97  Identities=14%  Similarity=0.151  Sum_probs=61.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-CHhhHHHhh--
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-DPAEVGNVV--  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-D~~~~~~~~--  148 (401)
                      .+.+|||+    |++|-+|..+++.+...|.+|++++++.++...++.          ..+++.+. . +.+++.+.+  
T Consensus       158 ~g~~VlV~----GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~----------~lGa~~vi~~~~~~~~~~~i~~  223 (348)
T PLN03154        158 KGDSVFVS----AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN----------KLGFDEAFNYKEEPDLDAALKR  223 (348)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----------hcCCCEEEECCCcccHHHHHHH
Confidence            45799999    999999999999999999999988877654332110          11332222 1 111222221  


Q ss_pred             -cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 -GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 -~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       .+.++|+|+++.|.  ......++.++..|  +++.++.
T Consensus       224 ~~~~gvD~v~d~vG~--~~~~~~~~~l~~~G--~iv~~G~  259 (348)
T PLN03154        224 YFPEGIDIYFDNVGG--DMLDAALLNMKIHG--RIAVCGM  259 (348)
T ss_pred             HCCCCcEEEEECCCH--HHHHHHHHHhccCC--EEEEECc
Confidence             22257999999884  34555666665555  6886653

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=94.42  E-value=0.2  Score=50.49  Aligned_cols=103  Identities=13%  Similarity=0.065  Sum_probs=59.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ++||||.     |.|.++..+++.+.+.|++|++++...+.. .......  .+-.+....-.--..|.+.+-++....+
T Consensus         2 ~kkili~-----g~g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~aD--~~~~~~~~~~~~~y~d~~~l~~~a~~~~   74 (449)
T TIGR00514         2 LDKILIA-----NRGEIALRILRACKELGIKTVAVHSTADRDALHVLLAD--EAVCIGPAPSAKSYLNIPNIISAAEITG   74 (449)
T ss_pred             cceEEEe-----CCCHHHHHHHHHHHHcCCeEEEEEChhhhcccccccCC--EEEEcCCCCchhchhCHHHHHHHHHHhC
Confidence            6899999     789999999999999999999997644321 1111000  0000000000001123455666666667


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEe
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                      +|+|+-..+.--+. ..+.+.+++.|++ |+-.
T Consensus        75 id~I~pg~g~~se~-~~~a~~~e~~Gi~-~~g~  105 (449)
T TIGR00514        75 ADAIHPGYGFLSEN-ANFAEQCERSGFT-FIGP  105 (449)
T ss_pred             CCEEEeCCCccccC-HHHHHHHHHCCCc-EECc
Confidence            89999765421111 2256778888873 5543

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.37  E-value=0.15  Score=53.37  Aligned_cols=88  Identities=14%  Similarity=0.202  Sum_probs=64.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~  149 (401)
                      .++|+|.     |.|-+|+.+++.|.++|++|++++.+++..+           .+...+..++.||   ++.++++ ++
T Consensus       400 ~~~vII~-----G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~-----------~~~~~g~~v~~GDat~~~~L~~agi~  463 (601)
T PRK03659        400 KPQVIIV-----GFGRFGQVIGRLLMANKMRITVLERDISAVN-----------LMRKYGYKVYYGDATQLELLRAAGAE  463 (601)
T ss_pred             cCCEEEe-----cCchHHHHHHHHHHhCCCCEEEEECCHHHHH-----------HHHhCCCeEEEeeCCCHHHHHhcCCc
Confidence            4689999     6999999999999999999999999886543           3334578899999   3444443 33


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      +  .|+||-+... ......++..+++...+
T Consensus       464 ~--A~~vv~~~~d-~~~n~~i~~~~r~~~p~  491 (601)
T PRK03659        464 K--AEAIVITCNE-PEDTMKIVELCQQHFPH  491 (601)
T ss_pred             c--CCEEEEEeCC-HHHHHHHHHHHHHHCCC
Confidence            3  5888876554 45566777788877543

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=94.35  E-value=0.22  Score=49.55  Aligned_cols=40  Identities=35%  Similarity=0.541  Sum_probs=34.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK  119 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~  119 (401)
                      |+|.|+     |.|++|..++..|.++||+|+++++++++.+.+.
T Consensus         1 mkI~vI-----GlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~   40 (411)
T TIGR03026         1 MKIAVI-----GLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLN   40 (411)
T ss_pred             CEEEEE-----CCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhh
Confidence            579999     6899999999999999999999999887655443

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.35  E-value=0.23  Score=47.32  Aligned_cols=99  Identities=21%  Similarity=0.246  Sum_probs=59.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      |+|.|+    |+ |.+|..++..|+.+|  ++|.+++++.+............. ... ....+..+|.   . .+.++ 
T Consensus         1 mkI~II----Ga-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~-~~~-~~~~i~~~d~---~-~l~~a-   68 (308)
T cd05292           1 MKVAIV----GA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGT-PFV-KPVRIYAGDY---A-DCKGA-   68 (308)
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccc-ccc-CCeEEeeCCH---H-HhCCC-
Confidence            589999    76 999999999999999  689999998765432000000000 000 1122232333   2 35666 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       153 ~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                       |+||.+++.              |....+.+++.+++.+.+ .++.++
T Consensus        69 -DiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          69 -DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             -CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             999999884              344556666666666544 344443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08818 prephenate dehydrogenase; Provisional

Probab=94.35  E-value=0.25  Score=48.20  Aligned_cols=34  Identities=29%  Similarity=0.211  Sum_probs=30.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVG  111 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~  111 (401)
                      .++|.|+    |++|.||+.+++.|.+. |++|+++++.
T Consensus         4 ~~~I~II----Gl~GliGgslA~alk~~~~~~V~g~D~~   38 (370)
T PRK08818          4 QPVVGIV----GSAGAYGRWLARFLRTRMQLEVIGHDPA   38 (370)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence            4799999    99999999999999975 8899998875

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=94.29  E-value=0.31  Score=46.16  Aligned_cols=81  Identities=22%  Similarity=0.252  Sum_probs=53.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .+|.|.    |++||.|..+++.|..+.+ ++..++-... .                        ++.+.++++.++  
T Consensus         2 ~~v~Iv----GasGy~G~el~rlL~~HP~~el~~l~s~~~-~------------------------~~~~~~~~~~~~--   50 (310)
T TIGR01851         2 PKVFID----GEAGTTGLQIRERLSGRDDIELLSIAPDRR-K------------------------DAAERAKLLNAA--   50 (310)
T ss_pred             CeEEEE----CCCChhHHHHHHHHhCCCCeEEEEEecccc-c------------------------CcCCHhHhhcCC--
Confidence            479999    9999999999999998843 5555432221 0                        111233454554  


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      |+||.+..  -.....++..+.+.|+ ++|=+|+..
T Consensus        51 D~vFlalp--~~~s~~~~~~~~~~g~-~VIDlSadf   83 (310)
T TIGR01851        51 DVAILCLP--DDAAREAVSLVDNPNT-CIIDASTAY   83 (310)
T ss_pred             CEEEECCC--HHHHHHHHHHHHhCCC-EEEECChHH
Confidence            99998775  3455666777767776 588788643

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.28  E-value=0.34  Score=46.60  Aligned_cols=95  Identities=24%  Similarity=0.308  Sum_probs=60.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC-HhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD-PAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D-~~~~~~~~~~~  151 (401)
                      +.+|+|+    |++|.+|..+++.+...|.+|+++++.. +...           +...++. ++..+ .+....+....
T Consensus       163 g~~vlI~----g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~~~~-----------~~~~g~~~~~~~~~~~~~~~l~~~~  226 (350)
T cd08248         163 GKRVLIL----GGSGGVGTFAIQLLKAWGAHVTTTCSTD-AIPL-----------VKSLGADDVIDYNNEDFEEELTERG  226 (350)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCcc-hHHH-----------HHHhCCceEEECCChhHHHHHHhcC
Confidence            6789999    9999999999999999999998887642 1111           0111221 22222 22233333333


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      .+|.|+++.+..  .....++.++..|  +||.++..
T Consensus       227 ~vd~vi~~~g~~--~~~~~~~~l~~~G--~~v~~g~~  259 (350)
T cd08248         227 KFDVILDTVGGD--TEKWALKLLKKGG--TYVTLVSP  259 (350)
T ss_pred             CCCEEEECCChH--HHHHHHHHhccCC--EEEEecCC
Confidence            579999998853  4555666666655  68888643

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=94.27  E-value=0.34  Score=45.04  Aligned_cols=92  Identities=18%  Similarity=0.195  Sum_probs=55.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      |+||.|+    |. |.||+.+++.|.+. +.++.++...........        .....++. +..|.+++     ..+
T Consensus         1 m~rVgIi----G~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~--------~~~~~~~~-~~~d~~~l-----~~~   61 (265)
T PRK13303          1 MMKVAMI----GF-GAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVR--------RALGEAVR-VVSSVDAL-----PQR   61 (265)
T ss_pred             CcEEEEE----CC-CHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHh--------hhhccCCe-eeCCHHHh-----ccC
Confidence            5799999    76 99999999999886 567666653322211100        00001222 23344443     234


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +|+|+.+++..  ....++..+.++|. +++-.|.
T Consensus        62 ~DvVve~t~~~--~~~e~~~~aL~aGk-~Vvi~s~   93 (265)
T PRK13303         62 PDLVVECAGHA--ALKEHVVPILKAGI-DCAVISV   93 (265)
T ss_pred             CCEEEECCCHH--HHHHHHHHHHHcCC-CEEEeCh
Confidence            79999999853  44566777777885 5665443

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=94.26  E-value=0.14  Score=47.72  Aligned_cols=106  Identities=13%  Similarity=0.165  Sum_probs=68.6

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcCHhhHHHhhc
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDPAEVGNVVG  149 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D~~~~~~~~~  149 (401)
                      +..+..|+|+    ||+|-+|+-+.+-..-+|++|+++.-++++.+-+...       +   +.+. +.--.+++.+.+.
T Consensus       148 pk~GetvvVS----aAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~-------l---GfD~~idyk~~d~~~~L~  213 (340)
T COG2130         148 PKAGETVVVS----AAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEE-------L---GFDAGIDYKAEDFAQALK  213 (340)
T ss_pred             CCCCCEEEEE----ecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHh-------c---CCceeeecCcccHHHHHH
Confidence            4456789999    9999999999888888899999999999876543321       1   1111 1011224444333


Q ss_pred             CC---cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCC
Q 015746          150 GV---TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       150 ~~---~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      .+   .+|+.|.|-|-++..  .++..+...  .|++.++-++-|+.+
T Consensus       214 ~a~P~GIDvyfeNVGg~v~D--Av~~~ln~~--aRi~~CG~IS~YN~~  257 (340)
T COG2130         214 EACPKGIDVYFENVGGEVLD--AVLPLLNLF--ARIPVCGAISQYNAP  257 (340)
T ss_pred             HHCCCCeEEEEEcCCchHHH--HHHHhhccc--cceeeeeehhhcCCC
Confidence            22   479999988864321  122222222  389999999999876

>PTZ00117 malate dehydrogenase; Provisional

Probab=94.26  E-value=0.34  Score=46.37  Aligned_cols=104  Identities=19%  Similarity=0.270  Sum_probs=64.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+||.|+    || |.+|+.++..|+..| .+|+.++.+.+......-. .............+. + ..+++ .+.++
T Consensus         4 ~~~KI~II----Ga-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lD-l~~~~~~~~~~~~i~-~-~~d~~-~l~~A   74 (319)
T PTZ00117          4 KRKKISMI----GA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALD-LKHFSTLVGSNINIL-G-TNNYE-DIKDS   74 (319)
T ss_pred             CCcEEEEE----CC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHH-HhhhccccCCCeEEE-e-CCCHH-HhCCC
Confidence            35799999    86 999999999999988 6898999877654321100 000011111112222 1 13455 55776


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCE-EEEecc
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~-~v~~SS  187 (401)
                        |+||.+++.              |....+.+++.+.+.+.+. +|.+|-
T Consensus        75 --DiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         75 --DVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             --CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence              999999974              3345667777777776554 666653

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.19  E-value=0.4  Score=45.39  Aligned_cols=97  Identities=16%  Similarity=0.206  Sum_probs=63.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~~  147 (401)
                      .+.+|||.    |++|.+|..+++.+...|.+|++++++.++.+.++.           .+++ ++..+    ...+.+.
T Consensus       138 ~~~~vlI~----g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  202 (323)
T cd05282         138 PGDWVIQN----AANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKA-----------LGADEVIDSSPEDLAQRVKEA  202 (323)
T ss_pred             CCCEEEEc----ccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHh-----------cCCCEEecccchhHHHHHHHH
Confidence            35689999    999999999999999999999998887754432211           1222 12112    2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+..+|.|+++.+..  ....+++.++..|  +|+.++..
T Consensus       203 ~~~~~~d~vl~~~g~~--~~~~~~~~l~~~g--~~v~~g~~  239 (323)
T cd05282         203 TGGAGARLALDAVGGE--SATRLARSLRPGG--TLVNYGLL  239 (323)
T ss_pred             hcCCCceEEEECCCCH--HHHHHHHhhCCCC--EEEEEccC
Confidence            4555689999998743  3445566555554  68877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK13886 conjugal transfer protein TraL; Provisional

Probab=94.18  E-value=0.91  Score=41.45  Aligned_cols=138  Identities=12%  Similarity=0.137  Sum_probs=78.7

Q ss_pred             cCeEEEEecCCCccccchHHH-----HHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc------CHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYL-----AKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG------DPA  142 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l-----~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------D~~  142 (401)
                      ++.++|+    |+-|.+|.-.     +..|.++|.+|.+++-++.+..-      ..|..+....+++...      +.+
T Consensus         2 ~~i~~i~----~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~~~------~~~~~l~~~~~~i~~~~~i~~r~fD   71 (241)
T PRK13886          2 AKIHMVL----QGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNATF------EGYKALNVRRLNIMDGDEINTRNFD   71 (241)
T ss_pred             CeEEEEe----cCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCchh------hhHHhcCCcceecccCCccchhhHH
Confidence            3456677    7788777655     66677789999999988765321      1122222122222222      234


Q ss_pred             hHHHhhcCCcccEEEeCCCCChhhH------HHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHH
Q 015746          143 EVGNVVGGVTFDVVLDNNGKNLDAV------RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~~~~~~~------~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek  216 (401)
                      .+-+.+...+-|+||++.+.+..++      ..+.+.+.+.|..-+++.-..+-   .   ...|        +-.+...
T Consensus        72 ~Lve~i~~~~~dvIIDngAs~~~~l~~yl~~n~l~~ll~e~g~~lvvh~vi~gg---~---~~~d--------tl~~~~~  137 (241)
T PRK13886         72 ALVEMIASTEGDVIIDNGASSFVPLSHYLISNQVPALLQDMGHELVVHTVVTGG---Q---ALLD--------TVSGFAQ  137 (241)
T ss_pred             HHHHHHhccCCCEEEECCCcchHHHHHHHHhCcHHHHHHHCCceEEEEEEECCC---c---ccHH--------HHHHHHH
Confidence            4444443334589999988776554      35678888899865555332221   1   1111        4455566


Q ss_pred             HHHHh--CCCeEEEecCeeecC
Q 015746          217 YISEN--FSNWASFRPQYMIGS  236 (401)
Q Consensus       217 ~~~e~--g~~~~ilRp~~v~G~  236 (401)
                      ++...  ..++++++-. .+|+
T Consensus       138 l~~~~~~~~~~Vvw~N~-~~G~  158 (241)
T PRK13886        138 LASQFPAECLFVVWLNP-YWGP  158 (241)
T ss_pred             HHHHcCCCceEEEEecC-ccCc
Confidence            67766  4667776643 4565

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=94.11  E-value=0.27  Score=48.95  Aligned_cols=88  Identities=25%  Similarity=0.323  Sum_probs=59.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      +|+|+|.     |-|--|..+++.|.++|++|++.+.++......       -..+...++++..+.-..  ..+..  +
T Consensus         7 ~~kv~V~-----GLG~sG~a~a~~L~~~G~~v~v~D~~~~~~~~~-------~~~~~~~~i~~~~g~~~~--~~~~~--~   70 (448)
T COG0771           7 GKKVLVL-----GLGKSGLAAARFLLKLGAEVTVSDDRPAPEGLA-------AQPLLLEGIEVELGSHDD--EDLAE--F   70 (448)
T ss_pred             CCEEEEE-----ecccccHHHHHHHHHCCCeEEEEcCCCCccchh-------hhhhhccCceeecCccch--hcccc--C
Confidence            7999999     799999999999999999999999666442110       011223466666664333  33333  5


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                      |.||-..|+.....  +++.+++.|+
T Consensus        71 d~vV~SPGi~~~~p--~v~~A~~~gi   94 (448)
T COG0771          71 DLVVKSPGIPPTHP--LVEAAKAAGI   94 (448)
T ss_pred             CEEEECCCCCCCCH--HHHHHHHcCC
Confidence            99999999654443  6666666655

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.09  E-value=0.37  Score=45.40  Aligned_cols=94  Identities=21%  Similarity=0.243  Sum_probs=62.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~~~~~~  148 (401)
                      .+.+|||.    |++|.+|..+++.+...|.+|+++++++++.+.+           ...+++.+..+    .+.+.+. 
T Consensus       142 ~g~~vlV~----ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~i~~~-  205 (320)
T cd08243         142 PGDTLLIR----GGTSSVGLAALKLAKALGATVTATTRSPERAALL-----------KELGADEVVIDDGAIAEQLRAA-  205 (320)
T ss_pred             CCCEEEEE----cCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HhcCCcEEEecCccHHHHHHHh-
Confidence            35799999    9999999999999999999999988877543221           11133222211    2333334 


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       +.++|.++++.+.  ......++.....|  +|+.++.
T Consensus       206 -~~~~d~vl~~~~~--~~~~~~~~~l~~~g--~~v~~g~  239 (320)
T cd08243         206 -PGGFDKVLELVGT--ATLKDSLRHLRPGG--IVCMTGL  239 (320)
T ss_pred             -CCCceEEEECCCh--HHHHHHHHHhccCC--EEEEEcc
Confidence             4458999999874  34555566665555  6887764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.09  E-value=0.17  Score=47.27  Aligned_cols=58  Identities=24%  Similarity=0.409  Sum_probs=47.8

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ...+++|+|+    |.++.+|+.++..|+.+|..|+++.+..                             .++.+.+..
T Consensus       155 ~l~Gk~vvVI----Grs~~VG~pla~lL~~~gatVtv~~s~t-----------------------------~~l~~~~~~  201 (286)
T PRK14175        155 DLEGKNAVVI----GRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------------KDMASYLKD  201 (286)
T ss_pred             CCCCCEEEEE----CCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHHhh
Confidence            3567999999    9999999999999999999999887632                             235666777


Q ss_pred             CcccEEEeCCCCC
Q 015746          151 VTFDVVLDNNGKN  163 (401)
Q Consensus       151 ~~~d~Vv~~a~~~  163 (401)
                      +  |+||...|..
T Consensus       202 A--DIVIsAvg~p  212 (286)
T PRK14175        202 A--DVIVSAVGKP  212 (286)
T ss_pred             C--CEEEECCCCC
Confidence            6  9999998853

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.03  E-value=0.37  Score=45.63  Aligned_cols=95  Identities=22%  Similarity=0.229  Sum_probs=62.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC--H-hhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--P-AEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D--~-~~~~~~~~~~  151 (401)
                      .+|+|.    |++|.+|..+++.+...|.+|++++++.++.+.++           ..+++.+...  . ....+...+.
T Consensus       148 ~~vlI~----g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~  212 (325)
T cd05280         148 GPVLVT----GATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-----------SLGASEVLDREDLLDESKKPLLKA  212 (325)
T ss_pred             CEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------hcCCcEEEcchhHHHHHHHHhcCC
Confidence            589999    99999999999999999999999988875543221           1122222211  1 1233333333


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ++|.|+++.+.  ......++.++..|  +||.++..
T Consensus       213 ~~d~vi~~~~~--~~~~~~~~~l~~~g--~~v~~g~~  245 (325)
T cd05280         213 RWAGAIDTVGG--DVLANLLKQTKYGG--VVASCGNA  245 (325)
T ss_pred             CccEEEECCch--HHHHHHHHhhcCCC--EEEEEecC
Confidence            47999998774  35556666665555  68877753

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.02  E-value=0.55  Score=44.47  Aligned_cols=102  Identities=21%  Similarity=0.300  Sum_probs=63.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +||-|+    |+ |+||+.++..|+.++  .+++.++...+.......... .-......... +.+| .+ -+.++++ 
T Consensus         1 ~KVavi----Ga-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~-~~~~~~~~~~~-i~~~-~~-y~~~~~a-   70 (313)
T COG0039           1 MKVAVI----GA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLS-HAAAPLGSDVK-ITGD-GD-YEDLKGA-   70 (313)
T ss_pred             CeEEEE----CC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchh-hcchhccCceE-EecC-CC-hhhhcCC-
Confidence            589999    98 999999999998875  479999988554433211100 00001101112 2222 22 3455666 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       |+|+-.||.              |..-.+.+.....+.+.+-++.+=|
T Consensus        71 -DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          71 -DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             -CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence             999999984              5677778888888877654554444

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.01  E-value=0.48  Score=42.24  Aligned_cols=93  Identities=20%  Similarity=0.257  Sum_probs=62.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ..+++|||+     |.|-+|..-++.|++.|.+|++++.....          .+..+. ..++.++.++..  ...+.+
T Consensus         7 l~gk~vlVv-----GgG~va~rk~~~Ll~~ga~VtVvsp~~~~----------~l~~l~~~~~i~~~~~~~~--~~dl~~   69 (205)
T TIGR01470         7 LEGRAVLVV-----GGGDVALRKARLLLKAGAQLRVIAEELES----------ELTLLAEQGGITWLARCFD--ADILEG   69 (205)
T ss_pred             cCCCeEEEE-----CcCHHHHHHHHHHHHCCCEEEEEcCCCCH----------HHHHHHHcCCEEEEeCCCC--HHHhCC
Confidence            346899999     68999999999999999999998764421          112221 125677767643  223555


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +  +.||-+.+. -.....+...|++.|+  +|.+.
T Consensus        70 ~--~lVi~at~d-~~ln~~i~~~a~~~~i--lvn~~  100 (205)
T TIGR01470        70 A--FLVIAATDD-EELNRRVAHAARARGV--PVNVV  100 (205)
T ss_pred             c--EEEEECCCC-HHHHHHHHHHHHHcCC--EEEEC
Confidence            4  877765543 3456788899988876  45443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02494 adenosylhomocysteinase

Probab=94.00  E-value=0.19  Score=50.14  Aligned_cols=91  Identities=15%  Similarity=0.153  Sum_probs=58.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|+     |.|.||+.+++.|...|.+|+++.+++.+...           ....+..++  +   +++++...
T Consensus       252 LaGKtVvVi-----GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~e-----------A~~~G~~vv--~---leEal~~A  310 (477)
T PLN02494        252 IAGKVAVIC-----GYGDVGKGCAAAMKAAGARVIVTEIDPICALQ-----------ALMEGYQVL--T---LEDVVSEA  310 (477)
T ss_pred             cCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHH-----------HHhcCCeec--c---HHHHHhhC
Confidence            346899999     78999999999999999999999887743211           111133322  2   44556655


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                        |+||.+.+..-......++.++..+  .|+.++.
T Consensus       311 --DVVI~tTGt~~vI~~e~L~~MK~GA--iLiNvGr  342 (477)
T PLN02494        311 --DIFVTTTGNKDIIMVDHMRKMKNNA--IVCNIGH  342 (477)
T ss_pred             --CEEEECCCCccchHHHHHhcCCCCC--EEEEcCC
Confidence              9999877642122234445554433  4777764

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=93.99  E-value=0.34  Score=46.10  Aligned_cols=97  Identities=19%  Similarity=0.253  Sum_probs=64.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D----~~~~~~~  147 (401)
                      ...+|+|.    ||+|.+|..+++.+...|.+|+++++..++...+.           ..++ .++..+    .+.+..+
T Consensus       140 ~g~~vlI~----g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  204 (327)
T PRK10754        140 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-----------KAGAWQVINYREENIVERVKEI  204 (327)
T ss_pred             CCCEEEEE----eCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HCCCCEEEcCCCCcHHHHHHHH
Confidence            35799999    99999999999999999999998887765432211           1122 122122    2334555


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+..+|+++++.+.  ......++.++..|  +||.++..
T Consensus       205 ~~~~~~d~vl~~~~~--~~~~~~~~~l~~~g--~~v~~g~~  241 (327)
T PRK10754        205 TGGKKVRVVYDSVGK--DTWEASLDCLQRRG--LMVSFGNA  241 (327)
T ss_pred             cCCCCeEEEEECCcH--HHHHHHHHHhccCC--EEEEEccC
Confidence            555568999998774  34455666665555  78877753

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=93.97  E-value=0.31  Score=46.03  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=60.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC---cccch-hcCCCeEE-EcCHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEI-VSAGGKTV-WGDPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~l-~~~~~~~~-~~D~~~~~~~~~  149 (401)
                      |+|-++     |.|.+|..+++.|++.||+|++.+|++. ...+......   ...+. ...++.++ .-|.+.+.+++.
T Consensus         1 m~Ig~I-----GlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~   74 (292)
T PRK15059          1 MKLGFI-----GLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLF   74 (292)
T ss_pred             CeEEEE-----ccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHc
Confidence            478999     7999999999999999999999988753 2221111100   01111 11111111 113344444432


Q ss_pred             C-------Cc-ccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          150 G-------VT-FDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       150 ~-------~~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      +       .. =.+||++.......++.+.+.+.+.|+.
T Consensus        75 ~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~  113 (292)
T PRK15059         75 GENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGD  113 (292)
T ss_pred             CCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence            2       11 2567788877788888888888887763

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.95  E-value=0.39  Score=44.94  Aligned_cols=96  Identities=22%  Similarity=0.305  Sum_probs=62.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~~~~~  147 (401)
                      .+.+|+|.    |++|.+|..+++.+...|.+|+++++++++.+.++           ..++.. +..+    .+.+...
T Consensus       136 ~g~~vlI~----g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  200 (320)
T cd05286         136 PGDTVLVH----AAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-----------AAGADHVINYRDEDFVERVREI  200 (320)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----------HCCCCEEEeCCchhHHHHHHHH
Confidence            35789999    99999999999999999999999887665433211           112222 2222    2233444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+..+|.|+++.+.  ......++.++..|  +|+.++.
T Consensus       201 ~~~~~~d~vl~~~~~--~~~~~~~~~l~~~g--~~v~~g~  236 (320)
T cd05286         201 TGGRGVDVVYDGVGK--DTFEGSLDSLRPRG--TLVSFGN  236 (320)
T ss_pred             cCCCCeeEEEECCCc--HhHHHHHHhhccCc--EEEEEec
Confidence            444458999998774  34445556555554  6887765

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=93.94  E-value=0.57  Score=43.52  Aligned_cols=92  Identities=18%  Similarity=0.273  Sum_probs=60.2

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEE-cC-HhhHHHhhcCCc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVW-GD-PAEVGNVVGGVT  152 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~D-~~~~~~~~~~~~  152 (401)
                      +|+|.    |++|-+|+.+++...+.|.++++..-+.. ...        ...++...++.++. .| ..++..++.. .
T Consensus         2 ~V~V~----Ga~GkMG~~v~~av~~~~~~Lv~~~~~~~~~~~--------~~~~~~g~~v~v~~~~~~~~~l~~~~~~-~   68 (275)
T TIGR02130         2 QIMVN----GCPGKMGKAVAEAADAAGLEIVPTSFGGEEEAE--------NEAEVAGKEILLHGPSEREARIGEVFAK-Y   68 (275)
T ss_pred             eEEEe----CCCChHHHHHHHHHhcCCCEEEeeEcccccccc--------chhhhcccceeeeccccccccHHHHHhh-c
Confidence            79999    99999999999999998888877522221 111        11122211333321 12 5566666644 2


Q ss_pred             cc-EEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          153 FD-VVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       153 ~d-~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +| ++|++.-  -..+...++.|.+.|+. +|
T Consensus        69 ~d~VvIDFT~--P~~~~~n~~~~~~~gv~-~V   97 (275)
T TIGR02130        69 PELICIDYTH--PSAVNDNAAFYGKHGIP-FV   97 (275)
T ss_pred             CCEEEEECCC--hHHHHHHHHHHHHCCCC-EE
Confidence            68 9999875  56677779999999985 44

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=93.92  E-value=0.21  Score=46.43  Aligned_cols=98  Identities=17%  Similarity=0.240  Sum_probs=64.0

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCC----CeEEEEecCCCCcccCCCCCCCcccchhcC--CCeEEEcCHhhHHHhhcC
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D~~~~~~~~~~  150 (401)
                      |.|+    ||+|.+|..++..|+..|    .+|+.+++++++.......    +.+....  ..++..  .+++.+.+.+
T Consensus         1 I~II----GagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d----l~~~~~~~~~~~i~~--~~d~~~~~~~   70 (263)
T cd00650           1 IAVI----GAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD----LQDAVEPLADIKVSI--TDDPYEAFKD   70 (263)
T ss_pred             CEEE----CCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH----HHHhhhhccCcEEEE--CCchHHHhCC
Confidence            5689    998999999999999998    7899999888665432211    1111111  223222  2345667788


Q ss_pred             CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      +  |+||.+++.              |....+.+++.+++.+.+ .+|.+|
T Consensus        71 a--DiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          71 A--DVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             C--CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            7  999998874              455677777777777544 344443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK05442 malate dehydrogenase; Provisional

Probab=93.90  E-value=0.33  Score=46.61  Aligned_cols=99  Identities=12%  Similarity=0.140  Sum_probs=61.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCCC--CcccCCCCCCCcccchh---cCCCeEEEcCH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDE--NSDKMKKPPFNRFNEIV---SAGGKTVWGDP  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~l~---~~~~~~~~~D~  141 (401)
                      ++||.|+    |++|.||+.++..|+..|.       +++.++..+.  +......    .+.+..   ..++.+..   
T Consensus         4 ~~KV~Ii----GaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~----Dl~~~~~~~~~~~~i~~---   72 (326)
T PRK05442          4 PVRVAVT----GAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVM----ELDDCAFPLLAGVVITD---   72 (326)
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeeh----hhhhhhhhhcCCcEEec---
Confidence            5799999    9999999999999998764       6888887542  2222111    111111   01233222   


Q ss_pred             hhHHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCC-CC-EEEEec
Q 015746          142 AEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFIS  186 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~g-v~-~~v~~S  186 (401)
                       +..+.+.++  |+||-+||.              |....+.+...+.+.. .+ .+|.+|
T Consensus        73 -~~y~~~~da--DiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         73 -DPNVAFKDA--DVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             -ChHHHhCCC--CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence             223455666  999999984              4566778888777743 23 455555

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=93.89  E-value=0.42  Score=45.88  Aligned_cols=96  Identities=20%  Similarity=0.285  Sum_probs=61.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc--C--HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D--PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D--~~~~~~~  147 (401)
                      .+.+|||+    |+ |.+|..+++.+...|.+ |+++++++++.+..           ...++..+..  +  .+.+.+.
T Consensus       163 ~g~~vlV~----G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-----------~~~ga~~~i~~~~~~~~~~~~~  226 (339)
T cd08239         163 GRDTVLVV----GA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-----------KALGADFVINSGQDDVQEIREL  226 (339)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-----------HHhCCCEEEcCCcchHHHHHHH
Confidence            36799999    86 99999999999999998 99888776543321           1113322221  1  2234444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+.++|+||++.+... .....++.++..|  +++.++.
T Consensus       227 ~~~~~~d~vid~~g~~~-~~~~~~~~l~~~G--~~v~~g~  263 (339)
T cd08239         227 TSGAGADVAIECSGNTA-ARRLALEAVRPWG--RLVLVGE  263 (339)
T ss_pred             hCCCCCCEEEECCCCHH-HHHHHHHHhhcCC--EEEEEcC
Confidence            44445899999987532 2344556666655  6887764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=93.86  E-value=0.41  Score=45.04  Aligned_cols=97  Identities=23%  Similarity=0.191  Sum_probs=61.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-cC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D----~~~~~~~  147 (401)
                      .+.+|+|+    |++|.+|..+++.+...|.+|+++.++.+....+           ...++..+. ..    .+.+...
T Consensus       139 ~~~~vlv~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~  203 (325)
T TIGR02824       139 AGETVLIH----GGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-----------EALGADIAINYREEDFVEVVKAE  203 (325)
T ss_pred             CCCEEEEE----cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HHcCCcEEEecCchhHHHHHHHH
Confidence            35799999    9999999999999999999999988876443211           111222221 11    2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+.++|.++++.+.  ......++.+...|  +||.++..
T Consensus       204 ~~~~~~d~~i~~~~~--~~~~~~~~~l~~~g--~~v~~g~~  240 (325)
T TIGR02824       204 TGGKGVDVILDIVGG--SYLNRNIKALALDG--RIVQIGFQ  240 (325)
T ss_pred             cCCCCeEEEEECCch--HHHHHHHHhhccCc--EEEEEecC
Confidence            444458999999874  23334445444444  68887753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit

Probab=93.84  E-value=0.43  Score=53.24  Aligned_cols=146  Identities=22%  Similarity=0.191  Sum_probs=81.2

Q ss_pred             cCeEEEEecCCCcccc-chH---------HHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhh
Q 015746           74 KKKVLIVNTNSGGHAV-IGF---------YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE  143 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~-iG~---------~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~  143 (401)
                      .++|||+    |+... ||+         ++++.|.+.||+|++++.+++....       .+. . ...+.+...+.+.
T Consensus       554 ~~kvlvl----G~G~~rig~~~efd~~~v~~i~al~~~G~~vI~v~~npetvs~-------d~~-~-~D~ly~ep~~~e~  620 (1050)
T TIGR01369       554 KKKVLVL----GSGPNRIGQGVEFDYCCVHAVLALRELGYETIMINYNPETVST-------DYD-T-SDRLYFEPLTFED  620 (1050)
T ss_pred             CceEEEe----cCcccccccccccchHHHHHHHHHHhCCCEEEEEecCCccccc-------ccc-c-cceEEEecCCHHH
Confidence            5799999    76654 555         7799999999999999888754211       010 0 0112222234677


Q ss_pred             HHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCC----CCCCCCCCCCCCC----CChHHHH
Q 015746          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPD----AGHVQVE  215 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~----~~~~~E~~~~~~~----~~~~~~e  215 (401)
                      +.++++..++|.||-..+-  ....++.+.+.+.|++ ++..|...+--..+    ..-+.+...+.|.    .+...+.
T Consensus       621 vl~i~~~e~idgVI~~~gg--~~~~~la~~le~~Gi~-i~G~s~~~i~~~~DK~~f~~lL~~~GIp~P~~~~v~s~ee~~  697 (1050)
T TIGR01369       621 VMNIIELEKPEGVIVQFGG--QTPLNLAKALEEAGVP-ILGTSPESIDRAEDREKFSELLDELGIPQPKWKTATSVEEAV  697 (1050)
T ss_pred             HHHHHhhcCCCEEEEccCc--HhHHHHHHHHHHCCCc-EECCCHHHHHHHCCHHHHHHHHHHCCcCCCCeEEECCHHHHH
Confidence            7788887789999854432  2234667777778874 54433222210000    0000111111111    2334455


Q ss_pred             HHHHHhCCCeEEEecCeeecC
Q 015746          216 KYISENFSNWASFRPQYMIGS  236 (401)
Q Consensus       216 k~~~e~g~~~~ilRp~~v~G~  236 (401)
                      +++.+.|.+ +++||....|.
T Consensus       698 ~~~~~igyP-vIVKP~~~~Gg  717 (1050)
T TIGR01369       698 EFASEIGYP-VLVRPSYVLGG  717 (1050)
T ss_pred             HHHHhcCCC-EEEEECCCCCC
Confidence            566666665 57999776554

In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=93.82  E-value=0.078  Score=49.74  Aligned_cols=40  Identities=28%  Similarity=0.364  Sum_probs=34.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSD  116 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~  116 (401)
                      ..+++|+|+    |+ |.+|+.++..|...| .+|++++|+.++..
T Consensus       121 ~~~k~vlVl----Ga-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~  161 (278)
T PRK00258        121 LKGKRILIL----GA-GGAARAVILPLLDLGVAEITIVNRTVERAE  161 (278)
T ss_pred             CCCCEEEEE----cC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            456799999    75 999999999999999 79999999886554

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=93.80  E-value=0.28  Score=45.62  Aligned_cols=103  Identities=18%  Similarity=0.259  Sum_probs=60.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCc---ccchhc--CCCeEEEcCHhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEIVS--AGGKTVWGDPAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~l~~--~~~~~~~~D~~~~~~~  147 (401)
                      ..++|=-.     |.|..|+.++..|++.||.|++.+|..++.+.+....-..   ..++..  .-+.+...|+.+...+
T Consensus        34 s~~~iGFI-----GLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v~~v  108 (327)
T KOG0409|consen   34 SKTRIGFI-----GLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDVKDV  108 (327)
T ss_pred             ccceeeEE-----eeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhhHHH
Confidence            45778788     8999999999999999999999999987764332211000   011110  1122233345555555


Q ss_pred             hcCCcccEE-----------EeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          148 VGGVTFDVV-----------LDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       148 ~~~~~~d~V-----------v~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +.+.  +.|           |+...++-...+.+.++++..+. +||
T Consensus       109 ~~g~--~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~-~~v  152 (327)
T KOG0409|consen  109 LLGK--SGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGG-RFV  152 (327)
T ss_pred             hcCC--CcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCC-eEE
Confidence            4432  222           33334455666677777766665 455

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.79  E-value=0.17  Score=47.41  Aligned_cols=36  Identities=31%  Similarity=0.341  Sum_probs=32.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~  115 (401)
                      |+|.|+    | .|.+|..+++.|.++|++|++.+|+++..
T Consensus         1 m~I~II----G-~G~mG~sla~~L~~~g~~V~~~d~~~~~~   36 (279)
T PRK07417          1 MKIGIV----G-LGLIGGSLGLDLRSLGHTVYGVSRRESTC   36 (279)
T ss_pred             CeEEEE----e-ecHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            579999    5 89999999999999999999999987543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=93.77  E-value=0.19  Score=47.96  Aligned_cols=72  Identities=32%  Similarity=0.477  Sum_probs=51.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..++|+|+    |+ |-+|+.+++.|...| .+|++++|+.++...+..        .  -+...+  +.+++.+.+..+
T Consensus       177 ~~~~V~Vi----Ga-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~--------~--~g~~~~--~~~~~~~~l~~a  239 (311)
T cd05213         177 KGKKVLVI----GA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAK--------E--LGGNAV--PLDELLELLNEA  239 (311)
T ss_pred             cCCEEEEE----Cc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH--------H--cCCeEE--eHHHHHHHHhcC
Confidence            57899999    65 999999999999876 689999998765432211        1  122222  445677777765


Q ss_pred             cccEEEeCCCCC
Q 015746          152 TFDVVLDNNGKN  163 (401)
Q Consensus       152 ~~d~Vv~~a~~~  163 (401)
                        |+||.+.+..
T Consensus       240 --DvVi~at~~~  249 (311)
T cd05213         240 --DVVISATGAP  249 (311)
T ss_pred             --CEEEECCCCC
Confidence              9999998854

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=93.75  E-value=0.42  Score=44.90  Aligned_cols=96  Identities=21%  Similarity=0.254  Sum_probs=62.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~~  147 (401)
                      .+.+|+|+    |++|-+|..++..+...|++|++++++.++.+.+..           .++. ++..+    .+.+...
T Consensus       139 ~~~~vli~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~i~~~  203 (323)
T cd08241         139 PGETVLVL----GAAGGVGLAAVQLAKALGARVIAAASSEEKLALARA-----------LGADHVIDYRDPDLRERVKAL  203 (323)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH-----------cCCceeeecCCccHHHHHHHH
Confidence            35789999    999999999999999999999999887654322111           1221 11111    2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+..+|.++++.+.  ......++.++..|  +++.++.
T Consensus       204 ~~~~~~d~v~~~~g~--~~~~~~~~~~~~~g--~~v~~~~  239 (323)
T cd08241         204 TGGRGVDVVYDPVGG--DVFEASLRSLAWGG--RLLVIGF  239 (323)
T ss_pred             cCCCCcEEEEECccH--HHHHHHHHhhccCC--EEEEEcc
Confidence            444458999998874  34445556555554  6887764

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	401
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		3e-04
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		5e-04

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 122/319 (38%), Gaps = 43/319 (13%)
Query: 84  SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGDPA 142
           +GG   IG +L  +L+  G+EV ++    +N    ++   N   E+ V       WG   
Sbjct: 6   TGGAGFIGSHLVDKLVELGYEVVVV----DNLSSGRREFVNPSAELHVRDLKDYSWG--- 58
Query: 143 EVGNVVGGVTF------DVVLDNN------GKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
               + G V F      +V L          +N+ A   V +WA+ +GV+  +F SS+ +
Sbjct: 59  --AGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTV 116
Query: 191 YKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
           Y  AD  P  E +  KP         AG V    Y         + R   ++G       
Sbjct: 117 YGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGV 176
Query: 243 EEWFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI--FNLV 296
               +D I++ R  P    + G G Q  +  +VRD       A +  E   +     N+ 
Sbjct: 177 ---IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVG 233
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
           +  AV +  +A++ A+  GL  EI        G    + +P    +          + GW
Sbjct: 234 NVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDG----RGWPGDVKYMTLAVTKLMKLTGW 289
Query: 357 RSTTNLPEDLKERFEEYVK 375
           R T    E +K+  E+  K
Sbjct: 290 RPTMTSAEAVKKTAEDLAK 308

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 119/318 (37%), Gaps = 45/318 (14%)
Query: 84  SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
           +GG   IG +L  +L+  G+EV ++ +   ++    +       +         WG    
Sbjct: 6   TGGAGFIGSHLVDKLVELGYEVVVVDIVQRDTGGSAELHVRDLKDYS-------WG---- 54
Query: 144 VGNVVGGVTF------DVVLDNN------GKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
              + G V F      +V L          +N+ A   V +WA+ +GV+  +F SS+ +Y
Sbjct: 55  -AGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVY 113
Query: 192 KPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
             AD  P  E +  KP         AG V    Y         + R   ++G        
Sbjct: 114 GDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGV- 172
Query: 244 EWFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI--FNLVS 297
              +D I++ R  P    + G G Q  +  +VRD       A +  E   +     N+ +
Sbjct: 173 --IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGN 230
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
             AV +  +A++ A+  GL  EI        G    + +P    +          + GWR
Sbjct: 231 VDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDG----RGWPGDVKYMTLAVTKLMKLTGWR 286
Query: 358 STTNLPEDLKERFEEYVK 375
            T    E +K+  E+  K
Sbjct: 287 PTMTSAEAVKKTAEDLAK 304

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	401
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	3e-22
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-19
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	5e-19
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-17
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-17
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	1e-15
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-15
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-15
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-15
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-15
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-15
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	4e-13
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	6e-13
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-12
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-11
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	3e-11
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-11
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	5e-11
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-11
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-10
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	3e-10
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	5e-10
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-09
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-09
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	1e-09
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-09
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-09
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	7e-09
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-08
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-08
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	5e-08
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-08
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-07
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-07
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	5e-07
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	1e-06
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-06
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	4e-06
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	2e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-04
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-04
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	4e-04
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	5e-04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 95.3 bits (238), Expect = 3e-22
 Identities = 49/337 (14%), Positives = 96/337 (28%), Gaps = 82/337 (24%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
             K+ +  T  GG   +G Y+ + +   G+      +    S   K      +       
Sbjct: 2   SLKIAV--T--GGTGFLGQYVVESIKNDGNTP----IILTRSIGNKAINDYEYRV----- 48

Query: 134 GKTVWGDPAEVGNVVGGVTFDVV------------LDNNGKNLDAVRPVADWAKSSGVKQ 181
                 D      +      D V            +     N    + + D    + +  
Sbjct: 49  -----SDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISN 103

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFS---------NWASFR 229
            ++ S+   Y      P  E ++  PD        V K   E+              + R
Sbjct: 104 IVYASTISAYSDETSLPWNEKELPLPDLMYG----VSKLACEHIGNIYSRKKGLCIKNLR 159

Query: 230 ----------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSS 276
                       YMI           FF +      + +  + +    F    + +D + 
Sbjct: 160 FAHLYGFNEKNNYMINR---------FFRQAFHGEQLTLHANSVAKREFL---YAKDAAK 207

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 336
            +  A++  +   S  FN+ S  A+T   +A     A G    ++  +P A         
Sbjct: 208 SVIYALKQEKV--SGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGI----- 260

Query: 337 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
                  Y +   AK++L + +  N    ++E     
Sbjct: 261 ----HSSYMDSSKAKELLDFSTDYNFATAVEEIHLLM 293

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 88.0 bits (218), Expect = 1e-19
 Identities = 47/275 (17%), Positives = 88/275 (32%), Gaps = 26/275 (9%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
             + ++L++    G    IG ++AK  L  GH   ++      S   +K          +
Sbjct: 2   GSRSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQL--LESFKA 55

Query: 132 AGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLFISS 187
           +G   V G     A +   V  V  DVV+       +++   +    K  G  +  F S 
Sbjct: 56  SGANIVHGSIDDHASLVEAVKNV--DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE 113

Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNKDCE 243
            G     D    VE      +    +V + I      +          Y + S       
Sbjct: 114 FGN--DVDNVHAVEPAKSVFEV-KAKVRRAIEAEGIPYTYVSSNCFAGYFLRSL------ 164

Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
                    +  V I G G          D+ +    AV++P   +  ++  +    ++L
Sbjct: 165 AQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSL 224

Query: 304 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
           + +  L  +     +E   Y P+   +      PF
Sbjct: 225 NELVALWEKKIDKTLEKA-YVPEEEVLKLIADTPF 258

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 85.5 bits (212), Expect = 5e-19
 Identities = 40/263 (15%), Positives = 87/263 (33%), Gaps = 50/263 (19%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
             K+LI      G   +G  LA+ L   GHEVT +                R  + + AG
Sbjct: 3   LSKILIA-----GCGDLGLELARRLTAQGHEVTGLR---------------RSAQPMPAG 42

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVL-----------DNNGKNLDAVRPVADWAKSSGV 179
            +T+  D   P  + ++V     ++++                 ++ +R      + + +
Sbjct: 43  VQTLIADVTRPDTLASIVHLRP-EILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL 101

Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWASFRPQYMIG 235
           +   F+SS G+Y    E    E              ++ E  ++    +    R   + G
Sbjct: 102 QHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA--YSSTILRFSGIYG 159

Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN-IFN 294
            G           +       P       +TN  H  D ++ +   ++    A    ++ 
Sbjct: 160 PGRL-----RMIRQAQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYI 211

Query: 295 LVSDRAVTLDGMAKLCAQAAGLP 317
           +  ++ + +  + +  A   G+ 
Sbjct: 212 VTDNQPLPVHDLLRWLADRQGIA 234

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 60/352 (17%), Positives = 105/352 (29%), Gaps = 77/352 (21%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNEIV 130
           KKV I  T  G    IG ++A+ LL  G +V  +    T   E+        F   + I 
Sbjct: 22  KKVFI--T--GICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGS-IA 76

Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVL-------------DNNGKNLDAVRPVADWAKSS 177
                    D A V  ++G +  D V+             ++   N      V   AK +
Sbjct: 77  ---------DHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKN 127

Query: 178 GVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENFS-----NWASFRP- 230
            V +F++  +A  Y     + P        P      + K  +E++      ++ +FR  
Sbjct: 128 NVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLA 187

Query: 231 ------QY--MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSSMLT 279
                      +           FF R+   +   +         F     V+DL+    
Sbjct: 188 NVVGPRNVSGPLPI---------FFQRLSEGKKCFV---TKARRDFV---FVKDLARATV 232

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI-VHYDPKAAGIDAKKAFPF 338
            AV+         ++  S   V +  +     +A  LP              DA      
Sbjct: 233 RAVDG---VGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPD-DAP----- 283

Query: 339 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 390
                  +P       G    T L E +      + + G        +I++ 
Sbjct: 284 ---SILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSGGYTHLKINEN 332

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 80.7 bits (199), Expect = 3e-17
 Identities = 41/325 (12%), Positives = 101/325 (31%), Gaps = 37/325 (11%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
            +K +VLIV    GG   IG  +    +  GH   ++   +  S+  K      F +   
Sbjct: 2   DKKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--- 54

Query: 132 AGGKTVWGD---PAEVGNVVGGVTFDVVLD-----NNGKNLDAVRPVADWAKSSGVKQFL 183
            G K +         + + +  V  DVV+          ++     + +  K +G  +  
Sbjct: 55  LGAKLIEASLDDHQRLVDALKQV--DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF 112

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNN 239
             S  G+    D   H             +V + I      +          Y  GS   
Sbjct: 113 LPSEFGM--DPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLA- 169

Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
               +     +  +  V I G G          D+ +    ++++P+  +  ++      
Sbjct: 170 ----QLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMN 225

Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNMHFYAEPRAAKDILGWRS 358
            ++   + ++  + +   ++ ++   +    D K   +  + +  +      +  L    
Sbjct: 226 ILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFE 285

Query: 359 TTNLPEDLKERF--------EEYVK 375
                 +  + +        + Y++
Sbjct: 286 IGPNAIEATKLYPEVKYVTMDSYLE 310

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 65/354 (18%), Positives = 116/354 (32%), Gaps = 79/354 (22%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFN 127
           A+ K  LI  T  G    IG  L + LL    +V  +    T    N D+++     +  
Sbjct: 25  AQPKVWLI--T--GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQW 80

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVTFDVVL----------------DNNGKNLDAVR 168
                  K + GD     +  N   GV  D VL                 +N  N+D   
Sbjct: 81  SNF----KFIQGDIRNLDDCNNACAGV--DYVLHQAALGSVPRSINDPITSNATNIDGFL 134

Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNW 225
            +   A+ + V+ F + +S+  Y      P VE  + KP    A    V KY++E +++ 
Sbjct: 135 NMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA----VTKYVNELYAD- 189

Query: 226 ASFRPQYMI-----------GSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQ---FT 266
             F   Y             G   + +         +   +++   V I G G     F 
Sbjct: 190 -VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC 248

Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-----LCAQAAGLPVEIV 321
              ++ +      LA      A + ++N+      +L+ +       L         E V
Sbjct: 249 ---YIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV 305

Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
           + D +   +           H  A+   A  +LG+    ++   +      Y+ 
Sbjct: 306 YRDFREGDVR----------HSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 349

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 74.4 bits (183), Expect = 2e-15
 Identities = 43/234 (18%), Positives = 76/234 (32%), Gaps = 41/234 (17%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
            + KK++++    G    +G  L  E L  G EVT   V      K++        ++  
Sbjct: 2   EKVKKIVLI----GASGFVGSALLNEALNRGFEVTA-VVRHPEKIKIENEHL----KVKK 52

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQ 181
           A          EV  V  G   D V+          D   + +     + D  K +GV +
Sbjct: 53  A----DVSSLDEVCEVCKGA--DAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNR 106

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMI 234
           FL +  AG    A     ++   V  +        G   +   + E   +W  F P   +
Sbjct: 107 FLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADM 166

Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
             G             + K  + +   G        V D ++ +   +E+P+  
Sbjct: 167 RPG------VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHH 211

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 75.8 bits (186), Expect = 2e-15
 Identities = 38/291 (13%), Positives = 83/291 (28%), Gaps = 28/291 (9%)

Query: 66  TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR 125
           TV    + K +VLI     G    IG ++A   L +     I+      S          
Sbjct: 2   TVSPVPSPKGRVLIA----GATGFIGQFVATASLDAHRPTYILARPGPRSP----SKAKI 53

Query: 126 FNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQ 181
           F  +   G   V+G       +  ++     D+V+    G+++     +    K+ G  +
Sbjct: 54  FKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIK 113

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSG 237
               S  G      +P       +       +V + + E+   +          +   + 
Sbjct: 114 RFLPSEFGHDVNRADPV---EPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNN 170

Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
                     + +       I G G          D+       V++    + ++    S
Sbjct: 171 ------IHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPS 224

Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDP---KAAGIDAKKAFPFRNMHFYA 345
              + ++ +A +  +  G  +  V        AA  +            + 
Sbjct: 225 CNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHD 275

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 75.3 bits (185), Expect = 2e-15
 Identities = 39/318 (12%), Positives = 92/318 (28%), Gaps = 31/318 (9%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           + K+LI+    G    IG ++    + +G+    +      +    +      +   S G
Sbjct: 2   ENKILIL----GPTGAIGRHIVWASIKAGNPTYALVR-KTITAANPETKEELIDNYQSLG 56

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
              + GD      +   +  V   V+       ++    +    K +G  +  F S  G+
Sbjct: 57  VILLEGDINDHETLVKAIKQVDI-VICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL 115

Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNKDCEEWF 246
                +       V +       + + I      +          Y + +          
Sbjct: 116 D---VDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNL------AQL 166

Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
                 +  V I G G          D+ +    A  +P   +  +   +    +T + +
Sbjct: 167 DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEV 226

Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
             L  +  G  +E  +   +    D +++ FP   +      +  K    +        +
Sbjct: 227 IALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAKDIE 286

Query: 366 LKERF--------EEYVK 375
             E +        +EY+ 
Sbjct: 287 ASEAYPDVTYTTADEYLN 304

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 75.0 bits (184), Expect = 3e-15
 Identities = 42/322 (13%), Positives = 99/322 (30%), Gaps = 34/322 (10%)

Query: 71  AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
            +  +K++I     GG   IG ++ +  L   H   I                    E  
Sbjct: 1   GSHMEKIIIY----GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQL--REEFR 54

Query: 131 SAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLFIS 186
           S G   + G+     ++ +V+  V  D+V+       + +   + +  K++G  +    S
Sbjct: 55  SMGVTIIEGEMEEHEKMVSVLKQV--DIVISALPFPMISSQIHIINAIKAAGNIKRFLPS 112

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNKDC 242
             G  +   +P      V+        + + I      +          Y +    +   
Sbjct: 113 DFGCEEDRIKPLPPFESVL---EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLH--- 166

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
                    R   + I G+G     + +  D++        +P   +  +        ++
Sbjct: 167 ---PSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIIS 223

Query: 303 LDGMAKLCAQAAGLPVEIVHYDP-----KAAGIDAKKAFPFRNMH--FYAEPRAAKDI-L 354
            + +  L    +GL  + VH         +  +   +  P   +H  F      + ++  
Sbjct: 224 QNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRK 283

Query: 355 GWRSTTNLPEDLK-ERFEEYVK 375
                +NL  +L+    +  + 
Sbjct: 284 DDIEASNLYPELEFTSIDGLLD 305

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 74.9 bits (185), Expect = 3e-15
 Identities = 65/328 (19%), Positives = 114/328 (34%), Gaps = 73/328 (22%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG 149
           IG +L  +L+  G+EV +  V + +S +          E V+   +    D  +  +   
Sbjct: 12  IGSHLVDKLVELGYEVVV--VDNLSSGRR---------EFVNPSAELHVRDLKDY-SWGA 59

Query: 150 GVTFDVVL-------------------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
           G+  DVV                    + N   + A   V +WA+ +GV+  +F SS+ +
Sbjct: 60  GIKGDVVFHFAANPEVRLSTTEPIVHFNEN---VVATFNVLEWARQTGVRTVVFASSSTV 116

Query: 191 YKPADEPPHVEGDVVKP----DAGHVQVEKYISENFS-----NWASFR--------PQYM 233
           Y  AD  P  E +  KP     A     E   +  ++        + R         ++ 
Sbjct: 117 YGDADVIPTPEEEPYKPISVYGAAKAAGEVMCA-TYARLFGVRCLAVRYANVVGPRLRHG 175

Query: 234 IGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEA-- 287
           +           F  ++ R    + + G G Q   +    +VRD       A +  E   
Sbjct: 176 VIYD--------FIMKLRRNPNVLEVLGDGTQRKSYL---YVRDAVEATLAAWKKFEEMD 224

Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
           A     N+ +  AV +  +A++ A+  GL  EI    P                +     
Sbjct: 225 APFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIR-LVPSTPDGRGWPGDV---KYMTLAV 280

Query: 348 RAAKDILGWRSTTNLPEDLKERFEEYVK 375
                + GWR T    E +K+  E+  K
Sbjct: 281 TKLMKLTGWRPTMTSAEAVKKTAEDLAK 308

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 67/353 (18%), Positives = 119/353 (33%), Gaps = 77/353 (21%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFN 127
              K  LI    +G    IG  L ++LL     V  +    T    N D++K        
Sbjct: 23  FSPKTWLI----TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQW 78

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVTFDVV------------LDN----NGKNLDAVR 168
                    + GD         V+ G   D V            + +    N  N+    
Sbjct: 79  SRF----CFIEGDIRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFL 132

Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNW 225
            +   AK++ V+ F + +S+  Y      P VE ++  P    A    V KY++E ++  
Sbjct: 133 NILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYA----VTKYVNEIYAQ- 187

Query: 226 ASFRPQYMI-----------GSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQ---FT 266
             +   Y             G   + +         +   +++   V I G G     F 
Sbjct: 188 -VYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC 246

Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI----VH 322
              ++ ++  M  L+    ++A  NI+N+      TL+ ++        L   I    + 
Sbjct: 247 ---YIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK 303

Query: 323 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
           Y    +G D +        H  A+   A D+L +R    + E L+     YV+
Sbjct: 304 YREFRSG-DVR--------HSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVR 347

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 66.9 bits (164), Expect = 4e-13
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 46/226 (20%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           KK+ I     G     G     + + +G+EVT++     +S ++                
Sbjct: 4   KKIAIF----GATGQTGLTTLAQAVQAGYEVTVLV---RDSSRLP--------SEGPRPA 48

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKN---------LDAVRPVADWAKSSGVKQF 182
             V GD    A+V   V G   D V+   G            +  R +    K+ GV + 
Sbjct: 49  HVVVGDVLQAADVDKTVAGQ--DAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKV 106

Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
           +  +SA +     + P     V      H+++ K + E+   + +  P            
Sbjct: 107 VACTSAFLLWDPTKVPPRLQAVTD---DHIRMHKVLRESGLKYVAVMPP----------- 152

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                D+        +   G   + +    DL   +   +   E  
Sbjct: 153 --HIGDQ-PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD 195

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 68.0 bits (166), Expect = 6e-13
 Identities = 46/281 (16%), Positives = 85/281 (30%), Gaps = 33/281 (11%)

Query: 69  ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
                K K+LI     GG   IG ++ K  L  GH   + T    NS K          E
Sbjct: 6   EENGMKSKILIF----GGTGYIGNHMVKGSLKLGHPTYVFTR--PNSSKTTLLD-----E 54

Query: 129 IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLF 184
             S G   V G+     ++  ++  V  DVV+       +     + +  K +G  +   
Sbjct: 55  FQSLGAIIVKGELDEHEKLVELMKKV--DVVISALAFPQILDQFKILEAIKVAGNIKRFL 112

Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNK 240
            S  G+    D    +       +     + + I E    +          Y I      
Sbjct: 113 PSDFGV--EEDRINALPPFEALIER-KRMIRRAIEEANIPYTYVSANCFASYFINY---- 165

Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
                       K  + + G+G     + + +D+         +P A +  +    S   
Sbjct: 166 -----LLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI 220

Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
           +T   +     +  G   + +H   +      K+     N+
Sbjct: 221 ITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENI 261

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 65.0 bits (159), Expect = 8e-12
 Identities = 47/346 (13%), Positives = 96/346 (27%), Gaps = 66/346 (19%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K  +    + G   +G + A+ +  +GH++ ++        ++         E   A   
Sbjct: 15  KYAV--LGATGL--LGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEP----ECRVAE-- 64

Query: 136 TVWGDPAEVGNVVGGVTFDVVL------DNNGK--------NLDAVRPVADWAKSSGVKQ 181
               D A +   + G+  D V+       +  +         L    P       + V +
Sbjct: 65  --MLDHAGLERALRGL--DGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPR 120

Query: 182 FLFISSAGIY------KPADE-PPHVEGDVVKPD------AGHVQVEKYISENFSNWASF 228
            L++ SA          P  E   +      K        A   Q  +            
Sbjct: 121 ILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGL-PVVIG 179

Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
            P  ++G  +           I                N+    +    L +A+E     
Sbjct: 180 IPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQR---NVIDAAEAGRGLLMALERGRI- 235

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV-----------------HYDPKAAGID 331
               + L++   + +  + +  A+  G P                         +   +D
Sbjct: 236 -GERY-LLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLD 293

Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 377
                      F  + R A++ LG+ STT L + L    + +   G
Sbjct: 294 ETAIEVMAGGQFL-DGRKAREELGFFSTTALDDTLLRAIDWFRDNG 338

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 63.8 bits (155), Expect = 1e-11
 Identities = 43/256 (16%), Positives = 89/256 (34%), Gaps = 35/256 (13%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
           S A    +L       GH      L++ L   G  +   +   +           +   I
Sbjct: 1   SNAMTGTLLSF-----GHGYTARVLSRALAPQGWRIIGTSRNPD-----------QMEAI 44

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVL---DNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
            ++G + +     E    + GVT  ++    D+ G  + A       A+++  +   ++S
Sbjct: 45  RASGAEPLLWPGEE--PSLDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLS 102

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-----FRPQYMIGSGNNKD 241
           +  +Y   D     E   + P A   +      + +    +     FR   + G G    
Sbjct: 103 TTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRG-- 160

Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
                F ++ +     I     Q  +  HV D++ +L  ++  P+  +  ++N+  D  V
Sbjct: 161 ----PFSKLGKGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPDPGA--VYNVCDDEPV 213

Query: 302 TLDGMAKLCAQAAGLP 317
               +    A+  GLP
Sbjct: 214 PPQDVIAYAAELQGLP 229

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 62.9 bits (154), Expect = 3e-11
 Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 29/220 (13%)

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFS-- 223
           + +  + +GV + +F S++ +Y  A   P  E     P     A  +  E  I  ++   
Sbjct: 97  LLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIE-SYCHT 155

Query: 224 ---NWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQ---FTNIAHVRDLSS 276
                  +R   +IG  +       F  ++ R    + I G+G Q   +    ++ D   
Sbjct: 156 FDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI---YISDCVD 212

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI-DAKKA 335
            +   +   E    NIFN+ S+  + +  +A++  +  GL               D    
Sbjct: 213 AMLFGLRGDER--VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVP-- 268

Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
                          K  LGW+   N  E ++    + V+
Sbjct: 269 ------VMLLSIEKLKR-LGWKPRYNSEEAVRMAVRDLVE 301

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 55/358 (15%), Positives = 111/358 (31%), Gaps = 84/358 (23%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELL--GSGHEVTI---MTVGDENSDKMKKPPFNRFN 127
           E + +LI  T  GG   +G  LA          +V +          S+         F 
Sbjct: 9   ENQTILI--T--GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSS-LGHFK 63

Query: 128 EIVSAGGKTVWGD--PAEVGNVVGGVTFDVVL---------DNNGK-----NLDAVRPVA 171
            ++   G+ +  D         +  + FD +            N +     N  A   + 
Sbjct: 64  NLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLL 123

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENF------ 222
           + A+S   K  ++ SSAG+Y    + P+V G    P+          K   + F      
Sbjct: 124 EIARSKKAK-VIYASSAGVYG-NTKAPNVVGKNESPENVYG----FSKLCMDEFVLSHSN 177

Query: 223 -SNWASFR------P-QY-------MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ--- 264
            +     R      P ++       M+                +  + V +   G Q   
Sbjct: 178 DNVQVGLRYFNVYGPREFYKEKTASMVLQ---------LALGAMAFKEVKLFEFGEQLRD 228

Query: 265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
           F    ++ D+      A++  +   S ++N+   +A + + +  +  +  G   ++ +  
Sbjct: 229 FV---YIEDVIQANVKAMKAQK---SGVYNVGYSQARSYNEIVSILKEHLGDF-KVTYIK 281

Query: 325 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA 382
              A    K        H  A        L +    +L   +K+       I + ++A
Sbjct: 282 NPYAF-FQK--------HTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKGQRA 330

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 62.2 bits (152), Expect = 5e-11
 Identities = 63/330 (19%), Positives = 113/330 (34%), Gaps = 74/330 (22%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           K ++LI  T  GG   IG +LA+ L+ SG EVT+  + D     M  P       +    
Sbjct: 7   KHRILI--T--GGAGFIGGHLARALVASGEEVTV--LDDLRVPPMIPPE-GTGKFLEKPV 59

Query: 134 GKTVWGDPAEVGNVV-----GGVTFDVV--LDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
            +    D ++V  V        V       LD    N+D+ R +     S GV + +  S
Sbjct: 60  LELEERDLSDVRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGS 118

Query: 187 SAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN--WASF------------ 228
           +  +Y  AD  P  E   + P     A      K   E  +     +             
Sbjct: 119 TCEVYGQADTLPTPEDSPLSPRSPYAAS-----KVGLEMVAGAHQRASVAPEVGIVRFFN 173

Query: 229 ------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSSMLT 279
                 RP  ++               ++ +  +P+ G G Q   FT   ++ D+   L 
Sbjct: 174 VYGPGERPDALVPR---------LCANLLTRNELPVEGDGEQRRDFT---YITDVVDKLV 221

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
                P     ++ N  S ++++++ + ++    +    E+    P+   I         
Sbjct: 222 ALANRPL---PSVVNFGSGQSLSVNDVIRILQATSP-AAEVARKQPRPNEI--------- 268

Query: 340 NMHFYAEPRAAKDILGWRS-TTNLPEDLKE 368
              F A+       +G RS    + E ++ 
Sbjct: 269 -TEFRADTALQTRQIGERSGGIGIEEGIRL 297

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 61.4 bits (149), Expect = 5e-11
 Identities = 40/267 (14%), Positives = 81/267 (30%), Gaps = 37/267 (13%)

Query: 71  AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI------------------MTVGD 112
           +A    VL+     G     G  + K+L     +                     + +GD
Sbjct: 1   SANLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGD 56

Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD--AVRPV 170
                   P F   + +V          P       G   F        + +D    +  
Sbjct: 57  ITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
            D AK +GVK  + + S G   P D P +  G+         + E+Y++++ + +   R 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNP-DHPLNKLGNGNILVW-KRKAEQYLADSGTPYTIIRA 174

Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
             ++               ++  +   +  +  +        D++ +   A+   EA + 
Sbjct: 175 GGLLDKEGG-------VRELLVGKDDELLQTDTKT---VPRADVAEVCIQALLFEEAKNK 224

Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLP 317
             F+L S    T        A  + + 
Sbjct: 225 -AFDLGSKPEGTSTPTKDFKALFSQVT 250

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 60.4 bits (146), Expect = 1e-10
 Identities = 31/228 (13%), Positives = 63/228 (27%), Gaps = 40/228 (17%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ I+    G     G  + +E    GHEVT +     N+ K+ +               
Sbjct: 2   KIGII----GATGRAGSRILEEAKNRGHEVTAIV---RNAGKITQTH---------KDIN 45

Query: 136 TVWGD------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
            +  D             V    + +  D   K++ ++  +      +   + L +  A 
Sbjct: 46  ILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105

Query: 190 IYKPADEPPHVEGDVVKPDA---------GHVQVEKYISENFSNWASFRPQYMIGSGNNK 240
             +  ++   +       +A                   +   +W    P  M   G   
Sbjct: 106 SLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG--- 162

Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
              E   D  + K  +     G  F     + D +  +   +E P   
Sbjct: 163 ---ERTGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHL 204

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 50/327 (15%), Positives = 91/327 (27%), Gaps = 70/327 (21%)

Query: 90  IGFYLAKELLGSG-HEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGN 146
           IG  + K L   G  ++ ++   D  ++  K          + +              G 
Sbjct: 11  IGSNIVKALNDKGITDILVV---DNLKDGTKFVNLVDLNIADYMDKEDFL---IQIMAGE 64

Query: 147 VVGGVTF---------------DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
             G V                   ++DNN       + +  +     +  FL+ SSA  Y
Sbjct: 65  EFGDVEAIFHEGACSSTTEWDGKYMMDNN---YQYSKELLHYCLEREIP-FLYASSAATY 120

Query: 192 KPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRP-------QYMIGS 236
                      +  KP              V + + E  S    FR        +   GS
Sbjct: 121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS 180

Query: 237 GNN---KDCEEWFFDRIVR-KRPVPIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEAAS 289
             +            ++   + P    GS      F    +V D++ +    +EN     
Sbjct: 181 MASVAFH-----LNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFLENGV--- 229

Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
           S IFNL + RA +   +A           +E + +  K  G               A+  
Sbjct: 230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQA--------FTQADLT 281

Query: 349 AAKDILGWRSTTNLPEDLKERFEEYVK 375
             +     +    + E + E      +
Sbjct: 282 NLRAAGYDKPFKTVAEGVTEYMAWLNR 308

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 28/229 (12%), Positives = 68/229 (29%), Gaps = 25/229 (10%)

Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD--------AGHVQ 213
           N++    + + AK   V++ +  S+ G++ P   +       + +P         A  + 
Sbjct: 88  NMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELL 147

Query: 214 VEKYISENFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNI 268
            + Y  +   +  S R   +I                 F   V++       +  +   +
Sbjct: 148 GQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPM 207

Query: 269 AHVRDLSSMLTLAVENPEAA--SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
            ++ D    L    E         N +N V+    T   +     +   +P   + Y   
Sbjct: 208 MYMPDALKALVDLYEADRDKLVLRNGYN-VTAYTFTPSELYSKIKER--IPEFEIEYKED 264

Query: 327 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
                    +P        +   A +  G+    +L   + +  +   +
Sbjct: 265 FRD-KIAATWPES-----LDSSEASNEWGFSIEYDLDRTIDDMIDHISE 307

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 51/347 (14%), Positives = 96/347 (27%), Gaps = 80/347 (23%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGD--ENSDKMKKPPFNRFNEI 129
           E + +++  T  GG   IG  + K L   G  ++ ++   D  ++  K          + 
Sbjct: 45  EGRMIIV--T--GGAGFIGSNIVKALNDKGITDILVV---DNLKDGTKFVNLVDLNIADY 97

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTF---------------DVVLDNNGKNLDAVRPVADWA 174
           +              G   G V                   ++DNN       + +  + 
Sbjct: 98  MDKEDFL---IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNN---YQYSKELLHYC 151

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWA 226
               +  FL+ SSA  Y           +  KP              V + + E  S   
Sbjct: 152 LEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIV 210

Query: 227 SFRP-------QY-------MIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQ---FTNI 268
            FR        +        +               ++   + P    GS      F   
Sbjct: 211 GFRYFNVYGPREGHKGSMASVAFH---------LNTQLNNGESPKLFEGSENFKRDFV-- 259

Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
            +V D++ +    +EN     S IFNL + RA +   +A             + Y P   
Sbjct: 260 -YVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKGQ--IEYIPFPD 313

Query: 329 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
            +  +           A+    +     +    + E + E      +
Sbjct: 314 KLKGRYQA-----FTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR 355

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 57.0 bits (137), Expect = 1e-09
 Identities = 27/209 (12%), Positives = 54/209 (25%), Gaps = 28/209 (13%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNE 128
           S A    + I+    G    I   L   LL  +   +T+             P       
Sbjct: 1   SNAMYXYITIL----GAAGQIAQXLTATLLTYTDMHITLYGR---QLKTRIPP-----EI 48

Query: 129 IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
           I       + G    P  +   V     +VV     ++   +  +        +++ + +
Sbjct: 49  IDHERVTVIEGSFQNPGXLEQAVTNA--EVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106

Query: 186 SSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
           S AG+                P     G  Q    + E+  N+   R  ++       D 
Sbjct: 107 SMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDY 166

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
           E       +         + +    +   
Sbjct: 167 E-------LIPEGAQFNDAQVSREAVVKA 188

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 57/331 (17%), Positives = 103/331 (31%), Gaps = 65/331 (19%)

Query: 70  SAAEKKKVLIVN-TNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFN 127
           S  +KK V++   T + G +V      + LL  G  +V ++T  +      K        
Sbjct: 1   SMVDKKLVVVFGGTGAQGGSVA-----RTLLEDGTFKVRVVTR-NPRKKAAK-------- 46

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVT--FDVVLDNNGKNLDAV----RPVADWAKSSG 178
           E+   G + V GD      +   + G    F V       + +      + +AD A+  G
Sbjct: 47  ELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG 106

Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSG 237
           +   ++     I K             K      +VE+Y  +      S R   Y     
Sbjct: 107 LHYVVYSGLENIKKLTAGRLAAAHFDGK-----GEVEEYFRDIGVPMTSVRLPCYF---- 157

Query: 238 NNKDCEEWFFDRIVRKR---------PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                 E      + ++          +P     M    ++ V DL  ++   ++ PE  
Sbjct: 158 ------ENLLSHFLPQKAPDGKSYLLSLPTGDVPMDG--MS-VSDLGPVVLSLLKMPEKY 208

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP----FRNMHFY 344
                 L +    T +  A L  +     V      P+      K  FP      NM  +
Sbjct: 209 VGQNIGLSTC-RHTAEEYAALLTKHTRKVVHDAKMTPEDY---EKLGFPGARDLANMFRF 264

Query: 345 AEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
              R  +DI        L        +++++
Sbjct: 265 YALRPDRDIELTLR---LNPKAL-TLDQWLE 291

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 60/335 (17%), Positives = 107/335 (31%), Gaps = 68/335 (20%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIV 130
           E  K+ I    +G    I  ++A+ L   GH V           ++ M    F+  +  V
Sbjct: 28  ENLKISI----TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRV 83

Query: 131 SAGGKTVWGDPAEVGNV---VGGVTF------DVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
                 V      V N+   +GG+ F       ++ +N   + +    + + A+ +G+K+
Sbjct: 84  MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN----MIEAARINGIKR 139

Query: 182 FLFISSAGIY-----KPADEPPHVEGDV--VKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           F + SSA IY              E D    +P      +EK  +E       +   + I
Sbjct: 140 FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF-GLEKLATEEL--CKHYNKDFGI 196

Query: 235 GS------------GNNKDCEEWFFDRIVRK-----RPVPIPGSGMQFTNIAHVRDLSSM 277
                         G  K   E       RK         + G G+Q  +   + +    
Sbjct: 197 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 256

Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY----DPKAAGIDAK 333
           +    ++         N+ SD  V+++ MA++        + I H       +    D  
Sbjct: 257 VLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNN 313

Query: 334 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
                            K+ LGW     L E L+ 
Sbjct: 314 L---------------IKEKLGWAPNMRLKEGLRI 333

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 48/235 (20%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VL+V    G +  +  YL  EL   GHE   M   +E   ++++               
Sbjct: 23  RVLVV----GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER----------GASD 68

Query: 136 TVWGD-PAEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQF 182
            V  +   +  +    +  D V+   G             +L         A+  G+K+F
Sbjct: 69  IVVANLEEDFSHAFASI--DAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRF 126

Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
           + +SS G      +P     ++          +  +  +  ++   RP    G       
Sbjct: 127 IMVSSVG----TVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRP----G------- 171

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
                +       V +     + T      D++ ++   V+         F +++
Sbjct: 172 --PLSNEE-STGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGK-TFEVLN 222

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 55.6 bits (135), Expect = 7e-09
 Identities = 63/341 (18%), Positives = 106/341 (31%), Gaps = 88/341 (25%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSA 132
           +VL+     GG   IG ++ ++LL  G EV +   +  G                E V  
Sbjct: 2   RVLVT----GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR--------------ENVPK 43

Query: 133 GGKTVWGD---PAEVGNVVGGVTFDVVL-------------------DNNGKNLDAVRPV 170
           G      D      V           V                    + N   L     +
Sbjct: 44  GVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVN---LLGGLNL 100

Query: 171 ADWAKSSGVKQFLFISSAG-IY-KPADEPPHVEGDVVKPD----AGHVQVEKYISENFS- 223
            +  +  GV++ +F S+ G IY +  +     E    +P     A     E Y+   +  
Sbjct: 101 LEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL-SVYGQ 159

Query: 224 ----NWASFRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPI-----PGSGMQ---FTN 267
                W S R   + G   +   E      F +R+++  PV +     PG       +  
Sbjct: 160 SYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV- 218

Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
             +V D++    LA+     +   I+N+ +    T   +    A+AAG   E+    P  
Sbjct: 219 --YVGDVAEAHALALF----SLEGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQ-PAPPR 271

Query: 328 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
            G D +             P       GWR      E ++ 
Sbjct: 272 PG-DLE--------RSVLSPLKLMA-HGWRPKVGFQEGIRL 302

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ IV    G    +G  L K L  + +++          +++ +              K
Sbjct: 2   KIFIV----GSTGRVGKSLLKSLSTTDYQIYAGA---RKVEQVPQYN----------NVK 44

Query: 136 TVWGD----PAEVGNVVGGVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFL 183
            V  D    P E+   + G+  D +++ +G         +L     +   A+ + VK+F+
Sbjct: 45  AVHFDVDWTPEEMAKQLHGM--DAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFI 102

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASFRP 230
            +S+    +P          +          + Y+++  + ++   +P
Sbjct: 103 LLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQP 150

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 28/256 (10%), Positives = 78/256 (30%), Gaps = 65/256 (25%)

Query: 146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDV 204
           N +   T  +         + ++          +K+ ++ ++     +   +      + 
Sbjct: 126 NTLT--TLKL--------YERLK------HFKRLKKVVYSAAGCSIAEKTFDDAKATEET 169

Query: 205 VKPDAGHVQ----VEKYISE-----------------NFSNWASFRPQYMIGSGNNKDCE 243
                 +      + K   E                  F N   + P  ++G+G  +   
Sbjct: 170 DIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQN--VYGPGEILGAGRWRGTP 227

Query: 244 EW--------FFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEAASSNI 292
                     F  + ++  P+P+   G+    F     V D+++ L       +     +
Sbjct: 228 ATVWRNVTPTFIYKALKGMPLPLENGGVATRDFI---FVEDVANGLIACAA--DGTPGGV 282

Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
           +N+ S +  ++  +A    +  G   E+     +                 +  P  A+ 
Sbjct: 283 YNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSG---------KRFGSPEKARR 333

Query: 353 ILGWRSTTNLPEDLKE 368
            LG+ +  ++ + L++
Sbjct: 334 ELGFSADVSIDDGLRK 349

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 34/222 (15%), Positives = 61/222 (27%), Gaps = 26/222 (11%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ ++    G     G  +  E    GHEV  +     +  K           +V     
Sbjct: 2   KIAVL----GATGRAGSAIVAEARRRGHEVLAVV---RDPQKAADRLGATVATLVKEPLV 54

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA- 194
               D   V  VV  ++          +LD    +    ++S       + SA +  P  
Sbjct: 55  LTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGA 114

Query: 195 ------DEPPHVEGDVVKPDAGHVQVEKYISENFS--NWASFRPQYMIGSGNNKDCEEWF 246
                 D P           A +   E    +  +  NW    P     SG         
Sbjct: 115 DHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPAT------ 168

Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
              +  K  + +   G          +++  +   +E+P A 
Sbjct: 169 -SYVAGKDTLLVGEDGQSHI---TTGNMALAILDQLEHPTAI 206

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.5 bits (126), Expect = 5e-08
 Identities = 46/238 (19%), Positives = 76/238 (31%), Gaps = 46/238 (19%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG----DENSDKMKK-----PPF 123
           + K V I+    G     G  L KE+L  G    +  +G      + +  K        F
Sbjct: 17  QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDF 72

Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN------LDAVRPVADWAKSS 177
            + ++  SA      G        +G           G         D V   A+ AK+ 
Sbjct: 73  EKLDDYASA----FQGHDV-GFCCLG-----TTRGKAGAEGFVRVDRDYVLKSAELAKAG 122

Query: 178 GVKQFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIG 235
           G K F  +SS G  K ++     V+G          +VE  + E  F  ++ FRP  ++ 
Sbjct: 123 GCKHFNLLSSKGADKSSNFLYLQVKG----------EVEAKVEELKFDRYSVFRPGVLLC 172

Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                   EW   +        +P S     ++  V  +   +   V  P      + 
Sbjct: 173 DRQESRPGEWLVRKFFG----SLPDSWASGHSV-PVVTVVRAMLNNVVRPRDKQMELL 225

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 37/233 (15%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           K VLI+    G    I  ++  +L      + T+         K+         +     
Sbjct: 24  KNVLIL----GAGGQIARHVINQLADKQTIKQTLFAR---QPAKIH--------KPYPTN 68

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAG 189
            + + GD    A +   + G    V  +  G++LD     V    K+  VK+ +F+ S G
Sbjct: 69  SQIIMGDVLNHAALKQAMQGQDI-VYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG 127

Query: 190 IYKPADEPPHVEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
           IY           + V  +      +    I  +   +   RP ++         +E   
Sbjct: 128 IYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT--------DEDII 179

Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
           D  +  R  P  G+ +        + +++++T  ++ PE        +     
Sbjct: 180 DYELTSRNEPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQPGT 226

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 46/329 (13%), Positives = 90/329 (27%), Gaps = 86/329 (26%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-------ENSDKMKKPPFNRFNE 128
           ++LI     GG   +G  L +  L  GHE+ ++   D       E    +          
Sbjct: 22  RILIT----GGAGCLGSNLIEHWLPQGHEILVI---DNFATGKREVLPPVAGLSV----- 69

Query: 129 IVSAGGKTVWGD---PAEVGNVVGGVTFDVVL----------------DNNGKNLDAVRP 169
                   + G       +           V+                  N   +     
Sbjct: 70  --------IEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATN---VQGSIN 118

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNW 225
           VA  A  +GVK+ L   +A  Y      P        P           E ++  +    
Sbjct: 119 VAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPV 178

Query: 226 ASFR------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI---AHVRDLSS 276
            S R      P+  IG          F+ R+   +             +     + D  +
Sbjct: 179 VSLRLANVTGPRLAIGPIPT------FYKRLKAGQKCFC------SDTVRDFLDMSDFLA 226

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKA 335
           +  L+++      + +FN+ +    ++  +  +     G  + E V      A  D    
Sbjct: 227 IADLSLQEGRP--TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGAD-DV--- 280

Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
                     +P   +   GW++  +  +
Sbjct: 281 -----PSVVLDPSKTETEFGWKAKVDFKD 304

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 33/202 (16%), Positives = 61/202 (30%), Gaps = 35/202 (17%)

Query: 138 WGDPAEVGNVVGGVTFDVVL------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           +  P  +     GV    +L       +N   +     V   A+ +GVK   +   A   
Sbjct: 54  YNQPESLQKAFAGV--SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF-- 109

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCE---EWFF 247
             A+E       V      H+  E  I      +   R   Y          +       
Sbjct: 110 --AEESIIPLAHV------HLATEYAIRTTNIPYTFLRNALYT---------DFFVNEGL 152

Query: 248 DRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
                   +    GSG+   N     +L+      +      +   +NLVS++  T D +
Sbjct: 153 RASTESGAIVTNAGSGI--VNSVTRNELALAAATVLTEEGHEN-KTYNLVSNQPWTFDEL 209

Query: 307 AKLCAQAAGLPVEIVHYDPKAA 328
           A++ ++ +G  V       +  
Sbjct: 210 AQILSEVSGKKVVHQPVSFEEE 231

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 30/199 (15%)

Query: 138 WGDPAEVGNVVGGVTFDVVL------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           + +   +     G+  D V+        + K +  V  +   AK SGV   +FI      
Sbjct: 53  YFNQESMVEAFKGM--DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD- 109

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDRI 250
              + P H+               + +S +  ++   R   YM       D  + +   +
Sbjct: 110 -QHNNPFHMSPY-------FGYASRLLSTSGIDYTYVRMAMYM-------DPLKPYLPEL 154

Query: 251 VRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
           +    +  P G G    N     D++  +   ++NP+      + L    +  +  +A +
Sbjct: 155 MNMHKLIYPAGDGR--INYITRNDIARGVIAIIKNPDTWGK-RYLLSGY-SYDMKELAAI 210

Query: 310 CAQAAGLPVEIVHYDPKAA 328
            ++A+G  ++      +  
Sbjct: 211 LSEASGTEIKYEPVSLETF 229

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 28/197 (14%)

Query: 138 WGDPAEVGNVVGGVTFDVVL----DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
           +GD A + + + GV  + +L       G+     R V + AK++GVK   + S       
Sbjct: 53  YGDEAALTSALQGV--EKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL------ 104

Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDRIVR 252
                H +   +     H++ EK ++++   +   R   Y        +         + 
Sbjct: 105 ----LHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYS-------ENYLASAPAALE 153

Query: 253 KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
                   G G      A   D ++     +         ++ L  D A TL  +A    
Sbjct: 154 HGVFIGAAGDGK--IASATRADYAAAAARVISEAGHEGK-VYELAGDSAWTLTQLAAELT 210

Query: 312 QAAGLPVEIVHYDPKAA 328
           + +G  V   +      
Sbjct: 211 KQSGKQVTYQNLSEADF 227

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 46/283 (16%), Positives = 81/283 (28%), Gaps = 49/283 (17%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAG 133
              LIV    G   +IG  LA+ L  +        V G     +      N     V   
Sbjct: 2   SVALIV----GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI-NYVQCD 56

Query: 134 GKTVWGDPAEVGNVVGGVTFDVVL------------DNNGKNLDAVRPVADW--AKSSGV 179
                 DP +    +  +T    +            +N   N    R V D        +
Sbjct: 57  ----ISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNL 112

Query: 180 KQFLFISSAGIYK---------PADEPPHVEGD-VVKPDAGHVQVEKYISENFS-----N 224
           K     +    Y           + +PP+ E    +K    +  +E  + E         
Sbjct: 113 KHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLT 172

Query: 225 WASFRPQYMIG----SGNNKDCEEWFFDRIVRK--RPVPIPGSGMQFTNIAHVRD---LS 275
           W+  RP  + G    S  N       +  I +   + +   G    +   +   D   ++
Sbjct: 173 WSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIA 232

Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
                A  +P A +   FN+ +          K+ A+  G+  
Sbjct: 233 EHHIWAAVDPYAKNE-AFNVSNGDVFKWKHFWKVLAEQFGVEC 274

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 16/135 (11%)

Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTLD 304
           F  +     P+ + G G Q      +RD    + +A+ NP +A    +FN  +++    +
Sbjct: 253 FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE 312

Query: 305 GMAKLCAQAA---GLPVEIVH-YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
            +A L  +A    GL V+ +   +P+    +          ++ A+     + LG     
Sbjct: 313 -LASLVTKAGSKLGLDVKKMTVPNPRVEAEEH---------YYNAKHTKLME-LGLEPHY 361

Query: 361 NLPEDLKERFEEYVK 375
                L       V+
Sbjct: 362 LSDSLLDSLLNFAVQ 376

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 40/226 (17%), Positives = 73/226 (32%), Gaps = 43/226 (19%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVS 131
            K+VL+     G   + G +L   +L       ++    +   +  +   P     E++ 
Sbjct: 5   PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLP 60

Query: 132 AGGKTVWGDPAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
                + G        +G           F  V      + D    V   A   G + +L
Sbjct: 61  Q----LDGSIDTAFCCLGTTIKEAGSEEAFRAV------DFDLPLAVGKRALEMGARHYL 110

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKDC 242
            +S+ G    AD    +  + VK      ++E+ + E  +      RP  + G       
Sbjct: 111 VVSALG----ADAKSSIFYNRVK-----GELEQALQEQGWPQLTIARPSLLFGPREEFRL 161

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL-SSMLTLAVENPEA 287
            E     I R     +PG    +  I    DL  ++  LA+E  + 
Sbjct: 162 AEILAAPIAR----ILPGK---YHGI-EACDLARALWRLALEEGKG 199

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 39/292 (13%), Positives = 74/292 (25%), Gaps = 100/292 (34%)

Query: 155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-----DVVKPDA 209
           V  D    N D  + V D  KS        +S   I         V G       +    
Sbjct: 24  VFEDAFVDNFD-CKDVQDMPKS-------ILSKEEIDHIIMSKDAVSGTLRLFWTLL-SK 74

Query: 210 GHVQVEKYISE----NFSNW--ASFRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPI 258
               V+K++ E    N+  +  +  + +    S   +   E     +  +++  K  V  
Sbjct: 75  QEEMVQKFVEEVLRINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133

Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA---K--LCAQA 313
                          L   L                L   + V +DG+    K  +    
Sbjct: 134 L---------QPYLKLRQAL--------------LELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFR----NMHFYAEPRAAKDIL-------------GW 356
                        +  +  +    F+    N+     P    ++L               
Sbjct: 171 C-----------LSYKV--QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 357 RSTTNLP---EDLKERFEEYVKIGR------------DKKAMQ-FEIDDKIL 392
             ++N+      ++      +K               + KA   F +  KIL
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL 269

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 38/262 (14%), Positives = 75/262 (28%), Gaps = 72/262 (27%)

Query: 177 SGVKQFLFISSAGIYKPADEPP------HVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
           SG K ++ +     YK   +        ++  +   P+     ++K + +   NW S R 
Sbjct: 161 SG-KTWVALDVCLSYKVQCKMDFKIFWLNL-KNCNSPETVLEMLQKLLYQIDPNWTS-RS 217

Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA-VENPEAAS 289
            +           +    R+++ +P              +   L   L L  V+N +A  
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKP--------------YENCL---LVLLNVQNAKAW- 259

Query: 290 SNIFN-----LV--SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 342
            N FN     L+    + VT    A      +     +     +   +  K      +  
Sbjct: 260 -NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL----DCR 314

Query: 343 FYAEPRAAKDILGWRSTTNLP-------EDLKE---RFEEYVKIGRDKKAMQFEIDDKIL 392
               PR              P       E +++    ++ +  +  DK     E    +L
Sbjct: 315 PQDLPREVLTTN--------PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366

Query: 393 ES--LK------------VPIP 400
           E    +              IP
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIP 388

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 49/339 (14%), Positives = 105/339 (30%), Gaps = 78/339 (23%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMT-VGDENSDKMKKPPFNRFNEIVS 131
             K+LI+    G    IG  L ++L    G E  I + +   N+D +   PF   N +  
Sbjct: 2   NPKILII----GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNAL-- 55

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDA---VR----PVADW----------- 173
                   D  ++ ++V       +       + A         P   W           
Sbjct: 56  --------DFNQIEHLVEVHKITDIY-----LMAALLSATAEKNPAFAWDLNMNSLFHVL 102

Query: 174 --AKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNW--- 225
             AK+  +K+  + SS  ++     +    +  +++P    G   + K   E +  +   
Sbjct: 103 NLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYG---ISKQAGERWCEYYHN 159

Query: 226 ------ASFRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQ---FTNIAHV 271
                  S R   +I                 F + +  +      S           ++
Sbjct: 160 IYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMM---YM 216

Query: 272 RDLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
            D        ++ P       + +N ++  + T   +A    +   +P   + Y+P    
Sbjct: 217 DDAIDATINIMKAPVEKIKIHSSYN-LAAMSFTPTEIANEIKKH--IPEFTITYEP---- 269

Query: 330 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
            D ++     +     +   A++   W+ T +L    K+
Sbjct: 270 -DFRQKIA-DSWPASIDDSQAREDWDWKHTFDLESMTKD 306

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 24/150 (16%), Positives = 42/150 (28%), Gaps = 36/150 (24%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            ++L+  T  G    +G  +   L    HEV +    D   D                  
Sbjct: 3   NRLLV--T--GAAGGVGSAIRPHLGTLAHEVRLS---D-IVDLGAAEAHEEI-------- 46

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVL------------DNNGKNLDAVRPVADWAKSSGV 179
             V  D      V ++V     D ++            D    N+     + + A++ G 
Sbjct: 47  --VACDLADAQAVHDLVKDC--DGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGK 102

Query: 180 KQFLFISSAGIY-KPADEPPHVEGDVVKPD 208
            + +F SS                   +PD
Sbjct: 103 PRIVFASSNHTIGYYPRTTRIDTEVPRRPD 132

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 38/302 (12%), Positives = 81/302 (26%), Gaps = 58/302 (19%)

Query: 71  AAEKKKVLIVN-TNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
           A +KK + +V  T   G ++I     +     GH V             ++        +
Sbjct: 2   AQQKKTIAVVGATGRQGASLI-----RVAAAVGHHVRAQV-HSLKGLIAEELQAIPNVTL 55

Query: 130 VSAGGKTVWGDPAEVGNVVGGVT--FDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFIS 186
                  +  +   +  +  G    F       G  +   + +AD AK +G ++ +++ S
Sbjct: 56  FQG---PLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS 112

Query: 187 --SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCE 243
                +Y P    P               VE Y+ +            Y           
Sbjct: 113 MPDHSLYGPWPAVPMWAP--------KFTVENYVRQLGLPSTFVYAGIYN---------- 154

Query: 244 EWFFDRIVRKRPVPIPGSG-----------MQFTNIAHVRDLSSM-LTLAVENPEAASSN 291
             F         + +   G           +    +    D+    L +  + P+  + +
Sbjct: 155 NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGH 214

Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF-------RNMHFY 344
              L  +  ++   +    ++A    V  V         + K   P             +
Sbjct: 215 RIALTFE-TLSPVQVCAAFSRALNRRVTYVQVPKV----EIKVNIPVGYREQLEAIEVVF 269

Query: 345 AE 346
            E
Sbjct: 270 GE 271

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 47/201 (23%)

Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE------- 215
           N+     +   A ++ +K F ++S+A +    +     E   ++  +    V+       
Sbjct: 190 NVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGY 249

Query: 216 ---KYISENFSNWAS---------FRPQYMIGS------GNNKDCEEWFFDRIVR----- 252
              K+  E     A+         FR   ++         N  D    +  R+V      
Sbjct: 250 GTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSD----WVTRMVLSLMAT 305

Query: 253 -------KRPVPIPGSGMQFTNIAHVRDLSSM---LTLAVENPEAASSNIFNLVS--DRA 300
                    P           +   V  ++     L   V     A    +++++  D  
Sbjct: 306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDG 365

Query: 301 VTLDGMAKLCAQAAGLPVEIV 321
           + LD         AG P+  +
Sbjct: 366 IGLDEYVDW-LIEAGYPIRRI 385

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 39/297 (13%), Positives = 86/297 (28%), Gaps = 36/297 (12%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
            ++I  T  G    +G  L  +L  +     I  V  +  ++  +    + + IV   G 
Sbjct: 2   NIVI--T--GAKGFVGKNLKADLTSTTDHH-IFEVHRQTKEEELESALLKADFIVHLAGV 56

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
                  E                   N+  +  V D    +  K  + +SS+       
Sbjct: 57  NRPEHDKEFSLG---------------NVSYLDHVLDILTRNTKKPAILLSSSIQATQ-- 99

Query: 196 EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---FFDRIVR 252
           + P+      K     + + +Y  E  +    +R   + G     +       F  +I R
Sbjct: 100 DNPY---GESKLQGEQL-LREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIAR 155

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
              + +         + +V D+ + +  A+E      + +  + +   VTL  +  L  +
Sbjct: 156 NEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYK 214

Query: 313 AAGLPVEIVHYDP-----KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
                ++           K          P  +  +        D   +      P+
Sbjct: 215 FKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMN-VDDRGSFTEFIKTPD 270

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	401
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.98
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.95
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.95
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.94
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.93
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.93
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.93
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.93
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.92
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.83
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.81
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.8
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.8
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.79
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.77
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.76
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.76
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.76
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.75
1spx_A	278	Short-chain reductase family member (5L265); paral	99.75
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.75
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.75
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.74
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.74
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.74
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.74
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.74
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.74
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.73
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.73
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.73
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.73
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.73
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.72
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.72
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.72
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.72
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.72
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.72
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.72
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.72
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.72
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.72
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.71
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.71
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.71
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.71
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.71
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.71
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.7
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.7
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.7
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.7
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.7
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.7
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.7
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.7
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.7
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.7
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.7
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.7
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.7
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.7
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.7
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.7
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.69
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.69
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.69
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.69
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.69
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.69
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.69
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.69
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.69
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.69
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.69
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.69
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.68
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.68
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.68
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.68
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.68
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.68
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.68
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.68
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.68
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.68
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.68
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.68
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.67
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.67
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.67
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.67
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.67
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.67
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.67
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.67
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.67
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.66
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.66
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.66
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.66
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.66
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.66
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.66
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.66
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.66
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.66
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.66
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.66
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.65
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.65
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.65
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.65
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.65
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.65
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.65
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.65
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.65
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.64
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.64
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.64
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.64
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.64
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.64
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.64
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.64
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.64
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.64
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.64
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.64
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.63
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.63
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.63
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.63
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.63
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.63
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.63
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.63
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.63
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.62
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.62
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.62
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.62
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.62
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.62
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.62
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.61
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.61
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.61
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.61
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.61
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.61
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.6
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.6
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.6
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.6
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.6
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.6
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.59
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.59
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.59
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.59
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.59
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.59
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.58
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.58
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.58
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.58
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.58
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.58
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.57
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.57
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.57
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.57
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.57
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.57
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.56
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.56
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.56
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.56
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.56
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.56
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.55
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.55
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.55
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.54
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.54
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.54
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.53
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.53
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.53
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.53
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.52
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.52
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.52
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.51
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.5
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.5
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.49
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.48
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.47
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.47
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.47
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.46
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.46
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.45
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.44
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.43
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.43
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.42
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.4
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.4
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.35
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.33
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.28
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.24
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.24
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.18
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.17
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.12
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.01
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.01
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.75
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.64
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.62
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.61
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.6
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.52
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.43
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.41
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.4
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.27
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.26
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.21
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.17
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.14
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.14
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.13
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.13
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.12
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.04
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.03
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.02
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.96
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.78
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.77
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.77
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.74
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.71
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.68
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.55
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.5
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.5
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.45
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.38
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.31
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.29
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.27
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.18
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.13
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.11
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.09
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.08
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.07
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.06
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.03
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.01
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.01
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.98
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.97
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.97
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.95
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.95
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.94
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.94
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.92
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.92
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.87
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.85
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.85
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.84
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.83
1lnq_A	336	MTHK channels, potassium channel related protein;	96.81
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.76
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.75
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.75
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.73
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.7
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.69
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.65
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.61
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.58
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.58
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.58
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.56
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.54
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.52
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.5
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.48
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.42
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.4
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.4
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.39
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.39
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.38
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.38
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.37
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.37
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.37
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.37
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.35
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.3
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.3
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.26
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.25
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.24
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.23
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.17
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.14
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.12
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.12
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.11
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.11
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.08
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.07
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.05
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.02
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.0
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.99
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.99
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.99
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	95.97
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.95
2duw_A	145	Putative COA-binding protein; ligand binding prote	95.92
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	95.91
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.9
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.9
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	95.9
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.87
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.86
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	95.84
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.84
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	95.82
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.81
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	95.81
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.79
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.79
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.78
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.75
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.74
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	95.69
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.67
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.64
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.6
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	95.56
3keo_A	212	Redox-sensing transcriptional repressor REX; DNA b	95.56
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	95.54
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.53
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.52
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	95.52
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	95.51
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.51
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	95.5
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	95.48
4ezb_A	317	Uncharacterized conserved protein; structural geno	95.41
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.4
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	95.4
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.38
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.35
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	95.33
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	95.29
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.29
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	95.27
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.26
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.23
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.23
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.22
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	95.19
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	95.18
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.18
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	95.17
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	95.15
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	95.14
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.13
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.12
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.12
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	95.12
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.11
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.1
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	95.01
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	95.01
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	94.98
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	94.97
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	94.97
2dzd_A	461	Pyruvate carboxylase; biotin carboxylase, ligase;	94.97
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	94.97
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	94.96
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	94.95
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	94.95
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	94.94
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	94.93
3nkl_A	141	UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo	94.92
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	94.91
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	94.91
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	94.87
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	94.84
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	94.8
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	94.79
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	94.76
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	94.75
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	94.73
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	94.7
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	94.69
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	94.68

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.9e-41  Score=325.96  Aligned_cols=288  Identities=21%  Similarity=0.224  Sum_probs=231.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-------CCCeEEEcC---
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-------AGGKTVWGD---  140 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~D---  140 (401)
                      .+++|+||||    |||||||++|+++|+++||+|++++|.......       ....+..       .+++++.+|   
T Consensus        22 ~~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d   90 (351)
T 3ruf_A           22 IFSPKTWLIT----GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY-------NLDEVKTLVSTEQWSRFCFIEGDIRD   90 (351)
T ss_dssp             HHSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH-------HHHHHHHTSCHHHHTTEEEEECCTTC
T ss_pred             CCCCCeEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchh-------hhhhhhhccccccCCceEEEEccCCC
Confidence            3457899999    999999999999999999999999998754321       1111111       478888888   


Q ss_pred             HhhHHHhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC
Q 015746          141 PAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       141 ~~~~~~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      .+++.+++++  +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+++
T Consensus        91 ~~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~  168 (351)
T 3ruf_A           91 LTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENI  168 (351)
T ss_dssp             HHHHHHHTTT--CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             HHHHHHHhcC--CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCC
Confidence            6778888885  5999999984                578899999999999999999999999999888889999988


Q ss_pred             CCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          205 VKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                      ..+. +.|+..|+..|         .+++++++||++|||++...     .++..++..+..++++.+++++++.++|+|
T Consensus       169 ~~p~-~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  247 (351)
T 3ruf_A          169 GNPL-SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCY  247 (351)
T ss_dssp             CCCC-SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred             CCCC-ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEE
Confidence            7664 55555443333         48999999999999997654     367788889999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHH
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA  350 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  350 (401)
                      ++|+|++++.+++.+....+++||+++++.+++.|+++.+.+.+|.+..+...+.....     ..+.......+|++|+
T Consensus       248 v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~  322 (351)
T 3ruf_A          248 IDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYRE-----FRSGDVRHSQADVTKA  322 (351)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEEC-----CCTTCCSBCCBCCHHH
T ss_pred             HHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccC-----CCCCccceeeeCHHHH
Confidence            99999999999998544346999999999999999999999999984332222111100     1112235677999999


Q ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          351 KDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       351 ~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      +++|||+|+++++++|+++++||+++.
T Consensus       323 ~~~lG~~p~~~~~~~l~~~~~~~~~~~  349 (351)
T 3ruf_A          323 IDLLKYRPNIKIREGLRLSMPWYVRFL  349 (351)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999763

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=8.8e-41  Score=317.50  Aligned_cols=274  Identities=17%  Similarity=0.197  Sum_probs=229.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC--HhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D--~~~~~~~~~~  150 (401)
                      |+|+||||    ||+||||++++++|+++|++|++++|+.....            +  .+++++.+|  .+++.+++++
T Consensus         1 M~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~--~~~~~~~~Dl~~~~~~~~~~~   62 (311)
T 3m2p_A            1 MSLKIAVT----GGTGFLGQYVVESIKNDGNTPIILTRSIGNKA------------I--NDYEYRVSDYTLEDLINQLND   62 (311)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCCHHHHHHHTTT
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc------------C--CceEEEEccccHHHHHHhhcC
Confidence            36899999    99999999999999999999999999842221            1  178888888  5777788875


Q ss_pred             CcccEEEeCCCC------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHH----
Q 015746          151 VTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV----  214 (401)
Q Consensus       151 ~~~d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~----  214 (401)
                        +|+|||+|+.            |+.++.+++++|++.++++|||+||.++|+.....+++|+++..|. +.|+.    
T Consensus        63 --~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~  139 (311)
T 3m2p_A           63 --VDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPD-LMYGVSKLA  139 (311)
T ss_dssp             --CSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS-SHHHHHHHH
T ss_pred             --CCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC-chhHHHHHH
Confidence              5999999984            5788999999999999999999999999998877889999887764 55554    


Q ss_pred             -HHHHHH----hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcC
Q 015746          215 -EKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (401)
Q Consensus       215 -ek~~~e----~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~  288 (401)
                       |+++.+    .+++++++||+++||++... .++..++..+..++++.+++++++.++|+|++|+|++++.+++++.. 
T Consensus       140 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~-  218 (311)
T 3m2p_A          140 CEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKV-  218 (311)
T ss_dssp             HHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTC-
T ss_pred             HHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCC-
Confidence             444444    48999999999999998764 47788888999999999999999999999999999999999998873 


Q ss_pred             CCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHH
Q 015746          289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  368 (401)
Q Consensus       289 ~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~  368 (401)
                       +++||+++++.+++.|+++.+.+.+|.+.++...+...         +.......+|++|++++|||+|+++++++|++
T Consensus       219 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~  288 (311)
T 3m2p_A          219 -SGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNA---------NEGIHSSYMDSSKAKELLDFSTDYNFATAVEE  288 (311)
T ss_dssp             -CEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSB---------CCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHH
T ss_pred             -CCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCC---------CCCcCceecCHHHHHHHhCCCcccCHHHHHHH
Confidence             58999999999999999999999999988877665521         11235677899999999999999999999999


Q ss_pred             HHHHHHHhcC
Q 015746          369 RFEEYVKIGR  378 (401)
Q Consensus       369 ~~~~~~~~~~  378 (401)
                      +++||++.++
T Consensus       289 ~~~~~~~~~~  298 (311)
T 3m2p_A          289 IHLLMRGLDD  298 (311)
T ss_dssp             HHHHHCC---
T ss_pred             HHHHHHhccc
Confidence            9999987754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=2.8e-40  Score=318.52  Aligned_cols=284  Identities=13%  Similarity=0.172  Sum_probs=228.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~  145 (401)
                      +.+|+||||    |||||||++|+++|+++|  ++|++++|........      .+..+ ...+++++.+|   .+.+.
T Consensus        22 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~Dl~d~~~~~   91 (346)
T 4egb_A           22 SNAMNILVT----GGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLN------NVKSIQDHPNYYFVKGEIQNGELLE   91 (346)
T ss_dssp             --CEEEEEE----TTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGG------GGTTTTTCTTEEEEECCTTCHHHHH
T ss_pred             cCCCeEEEE----CCccHHHHHHHHHHHhhCCCcEEEEEeccccccchh------hhhhhccCCCeEEEEcCCCCHHHHH
Confidence            346899999    999999999999999999  6777777765222110      11111 12478888888   77788


Q ss_pred             HhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCC-CCCCCCCCCCCCCC
Q 015746          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPD  208 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~-~~~~~~E~~~~~~~  208 (401)
                      +++++.++|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.. ...+++|+++..+.
T Consensus        92 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~  171 (346)
T 4egb_A           92 HVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN  171 (346)
T ss_dssp             HHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC
T ss_pred             HHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC
Confidence            88887557999999983                56789999999999999999999999999976 45688898887664


Q ss_pred             CChHHHHH-----HHHH----hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          209 AGHVQVEK-----YISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       209 ~~~~~~ek-----~~~e----~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                       +.|+..|     ++.+    .+++++++||+++||++... .++..++..+..++++.+++++.+.++|+|++|+|+++
T Consensus       172 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  250 (346)
T 4egb_A          172 -SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAI  250 (346)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHH
Confidence             5555544     4433    49999999999999997653 46777888999999999999999999999999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHHHHhcCCC
Q 015746          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  357 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  357 (401)
                      +.+++++..  |++||+++++.+++.|+++.+.+.+|.+.+ +...+....          ....+.+|++|++++|||+
T Consensus       251 ~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~~d~~k~~~~lG~~  318 (346)
T 4egb_A          251 DVVLHKGRV--GEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLG----------HDRRYAINAEKMKNEFDWE  318 (346)
T ss_dssp             HHHHHHCCT--TCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--C----------CCSCCCBCCHHHHHHHCCC
T ss_pred             HHHHhcCCC--CCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCC----------CcceeeccHHHHHHHcCCC
Confidence            999998773  689999999999999999999999998765 322222211          1245668999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhcC
Q 015746          358 STTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      |.++++|+|+++++||++++.
T Consensus       319 p~~~~~e~l~~~~~~~~~~~~  339 (346)
T 4egb_A          319 PKYTFEQGLQETVQWYEKNEE  339 (346)
T ss_dssp             CCCCHHHHHHHHHHHHHHCHH
T ss_pred             CCCCHHHHHHHHHHHHHhhhh
Confidence            999999999999999998743

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=4.7e-40  Score=312.26  Aligned_cols=279  Identities=24%  Similarity=0.289  Sum_probs=223.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhh--HHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE--VGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~--~~~~~~~~~  152 (401)
                      |+||||    ||+||||++++++|+++||+|++++|........           ...+++++.+|..+  +.+++++  
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~--   63 (312)
T 3ko8_A            1 MRIVVT----GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-----------VNPSAELHVRDLKDYSWGAGIKG--   63 (312)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-----------SCTTSEEECCCTTSTTTTTTCCC--
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-----------cCCCceEEECccccHHHHhhcCC--
Confidence            689999    9999999999999999999999999987654321           13477888888433  4555554  


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHH
Q 015746          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (401)
Q Consensus       153 ~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek  216 (401)
                       |+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+.+..+. +.|+..|
T Consensus        64 -d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~-~~Y~~sK  141 (312)
T 3ko8_A           64 -DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPI-SVYGAAK  141 (312)
T ss_dssp             -SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHHH
T ss_pred             -CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCC-ChHHHHH
Confidence             999999983                5788999999999999999999999999998877888888877654 6666555


Q ss_pred             HHHH---------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC-CCcccCCCCcceeeeeeHHHHHHHHHHHhcC--
Q 015746          217 YISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN--  284 (401)
Q Consensus       217 ~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~--  284 (401)
                      ...|         .+++++++||+++||++.....+..++..+..+ .++.+++++.+.++|+|++|+|++++.++++  
T Consensus       142 ~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  221 (312)
T 3ko8_A          142 AAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFE  221 (312)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcc
Confidence            4433         389999999999999987777777788887776 5667889999999999999999999999987  


Q ss_pred             -CCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHH
Q 015746          285 -PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP  363 (401)
Q Consensus       285 -~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~  363 (401)
                       +... +++||+++++.+++.|+++.+.+.+|.+.++...+.....    ..++.......+|++|+++.|||+|+++++
T Consensus       222 ~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~  296 (312)
T 3ko8_A          222 EMDAP-FLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDG----RGWPGDVKYMTLAVTKLMKLTGWRPTMTSA  296 (312)
T ss_dssp             HSCCS-EEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC--------------CCCSEECBCCHHHHHHHCCCCSSCHH
T ss_pred             ccCCC-CcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccc----cCCCCCccccccCHHHHHHHhCCCCCCCHH
Confidence             3222 5899999999999999999999999998887765543211    122333466789999999999999999999


Q ss_pred             HHHHHHHHHHHHhc
Q 015746          364 EDLKERFEEYVKIG  377 (401)
Q Consensus       364 e~l~~~~~~~~~~~  377 (401)
                      |+|+++++||++++
T Consensus       297 ~~l~~~~~~~~~~~  310 (312)
T 3ko8_A          297 EAVKKTAEDLAKEL  310 (312)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhh
Confidence            99999999999875

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-39  Score=313.29  Aligned_cols=286  Identities=20%  Similarity=0.249  Sum_probs=226.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+||||++++++|+++|++|++++|.........    ..+......++.++.+|   .+++.++++
T Consensus         4 ~~~~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (341)
T 3enk_A            4 TKGTILVT----GGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI----ARIEKITGKTPAFHETDVSDERALARIFD   75 (341)
T ss_dssp             SSCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH----HHHHHHHSCCCEEECCCTTCHHHHHHHHH
T ss_pred             CCcEEEEe----cCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH----HHHHhhcCCCceEEEeecCCHHHHHHHHh
Confidence            35799999    99999999999999999999999999876543211    01111223467788887   777888887


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~  213 (401)
                      ..++|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+.+..+. +.|+
T Consensus        76 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~  154 (341)
T 3enk_A           76 AHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSAT-NPYG  154 (341)
T ss_dssp             HSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS-SHHH
T ss_pred             ccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCC-ChhH
Confidence            5457999999984                5788999999999999999999999999998877888998877654 5666


Q ss_pred             HHHHHHH-----h-----CCCeEEEecCeeecCCCC-----------CCcHHHHHHHHHcC--CCcccCC------CCcc
Q 015746          214 VEKYISE-----N-----FSNWASFRPQYMIGSGNN-----------KDCEEWFFDRIVRK--RPVPIPG------SGMQ  264 (401)
Q Consensus       214 ~ek~~~e-----~-----g~~~~ilRp~~v~G~~~~-----------~~~~~~~~~~~~~~--~~~~~~~------~~~~  264 (401)
                      ..|...|     +     +++++++||+++||++..           ..++.. +.....+  .++.++|      ++++
T Consensus       155 ~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~g~~  233 (341)
T 3enk_A          155 QTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPY-VAQVAVGKLEKLRVFGSDYPTPDGTG  233 (341)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHH-HHHHHHTSSSCEEEECSCSSSTTSSC
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHH-HHHHHhcCCCceEEeCCccCCCCCCe
Confidence            5554433     2     489999999999999542           223443 3344433  4556677      7889


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceE
Q 015746          265 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF  343 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (401)
                      .++|+|++|+|++++.++++.. ...+++||+++++.+++.|+++.+.+.+|.+.++...+.....          ...+
T Consensus       234 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~  303 (341)
T 3enk_A          234 VRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGD----------VAEC  303 (341)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTC----------CSEE
T ss_pred             eEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCC----------cccc
Confidence            9999999999999999998732 1225899999999999999999999999998887766543322          2567


Q ss_pred             eechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       344 ~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      .+|++|++++|||+|+++++|+|+++++||+++..
T Consensus       304 ~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~  338 (341)
T 3enk_A          304 YANPAAAAETIGWKAERDLERMCADHWRWQENNPR  338 (341)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred             ccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence            78999999999999999999999999999998743

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=7.2e-40  Score=310.70  Aligned_cols=274  Identities=14%  Similarity=0.115  Sum_probs=219.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      +++|+||||    ||+||||++|+++|+++|+      +.....           ..+  ..+.....|++.+.+++++.
T Consensus         4 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~------~~~~~~-----------~~~--~~~~~D~~d~~~~~~~~~~~   60 (319)
T 4b8w_A            4 FQSMRILVT----GGSGLVGKAIQKVVADGAG------LPGEDW-----------VFV--SSKDADLTDTAQTRALFEKV   60 (319)
T ss_dssp             CCCCEEEEE----TCSSHHHHHHHHHHHTTTC------CTTCEE-----------EEC--CTTTCCTTSHHHHHHHHHHS
T ss_pred             ccCCeEEEE----CCCcHHHHHHHHHHHhcCC------cccccc-----------ccc--CceecccCCHHHHHHHHhhc
Confidence            467999999    9999999999999999998      111100           000  01122223588899999886


Q ss_pred             cccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC----CCCCCCC
Q 015746          152 TFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAG  210 (401)
Q Consensus       152 ~~d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~----~~~~~~~  210 (401)
                      ++|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+.....+++|++    +..+...
T Consensus        61 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~  140 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNF  140 (319)
T ss_dssp             CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSH
T ss_pred             CCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcc
Confidence            78999999984                 46789999999999999999999999999988888888887    4444322


Q ss_pred             hHHH-----HHHHHH----hCCCeEEEecCeeecCCCCC-----CcHHHHHHH----HHcCCCcccCCCCcceeeeeeHH
Q 015746          211 HVQV-----EKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDR----IVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       211 ~~~~-----ek~~~e----~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                      .|+.     |+++.+    .+++++++||+++|||+...     .++..++..    +..++++.+++++++.++|+|++
T Consensus       141 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (319)
T 4b8w_A          141 GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSL  220 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHH
Confidence            3554     444433    58999999999999998653     356666666    78899999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD  352 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  352 (401)
                      |+|++++.+++++....+++||+++++.+++.|+++.+.+.+|.+.++...+.....          .....+|++|+++
T Consensus       221 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~  290 (319)
T 4b8w_A          221 DLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDG----------QFKKTASNSKLRT  290 (319)
T ss_dssp             HHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCC----------CSCCCBCCHHHHH
T ss_pred             HHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcC----------cccccCCHHHHHH
Confidence            999999999998655445899999999999999999999999998877665543322          1345689999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          353 ILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       353 ~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      +|||.|.++++|+|+++++||+++..
T Consensus       291 ~lg~~p~~~~~~~l~~~~~~~~~~~~  316 (319)
T 4b8w_A          291 YLPDFRFTPFKQAVKETCAWFTDNYE  316 (319)
T ss_dssp             HCTTCCCCCHHHHHHHHHHHHHHSCS
T ss_pred             hcCCCCCCCHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999998754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=2e-39  Score=308.37  Aligned_cols=280  Identities=18%  Similarity=0.247  Sum_probs=216.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH--hhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~--~~~~~~~~~~  151 (401)
                      ||+||||    ||+||||++++++|+++| .|+++++.......           ....+++++.+|.  +++.+++++ 
T Consensus         1 M~~vlVT----GatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~-   63 (313)
T 3ehe_A            1 MSLIVVT----GGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE-----------FVNEAARLVKADLAADDIKDYLKG-   63 (313)
T ss_dssp             --CEEEE----TTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG-----------GSCTTEEEECCCTTTSCCHHHHTT-
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh-----------hcCCCcEEEECcCChHHHHHHhcC-
Confidence            5799999    999999999999999999 45555544322211           1123566777773  556677775 


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHH
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~e  215 (401)
                       +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+.+..+. +.|+..
T Consensus        64 -~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~-~~Y~~s  141 (313)
T 3ehe_A           64 -AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPI-SLYGAS  141 (313)
T ss_dssp             -CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCC-SHHHHH
T ss_pred             -CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCC-CHHHHH
Confidence             5999999983                5789999999999999999999999999998877888888876654 566655


Q ss_pred             HHHHH---------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC-CCcccCCCCcceeeeeeHHHHHHHHHHHhcCC
Q 015746          216 KYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (401)
Q Consensus       216 k~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~  285 (401)
                      |...|         .+++++++||+++||++.....+..++..+..+ .++.+++++++.++|+|++|+|++++.+++..
T Consensus       142 K~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  221 (313)
T 3ehe_A          142 KLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD  221 (313)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC
Confidence            54333         489999999999999987777777788887776 56678999999999999999999999999944


Q ss_pred             CcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHH
Q 015746          286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED  365 (401)
Q Consensus       286 ~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~  365 (401)
                      ..  +++||+++++.+++.|+++.+.+.+|.+..+...+...       .++.......+|++|++ +|||+|+++++|+
T Consensus       222 ~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~  291 (313)
T 3ehe_A          222 ER--VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDR-------GWKGDVPVMLLSIEKLK-RLGWKPRYNSEEA  291 (313)
T ss_dssp             SS--EEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC-------------------CCBCCHHHH-HHTCCCSCCHHHH
T ss_pred             CC--CceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCcc-------CCccccceeccCHHHHH-HcCCCCCCCHHHH
Confidence            33  58999999999999999999999999987765543211       01112245668999996 5999999999999


Q ss_pred             HHHHHHHHHHhcCCCcc
Q 015746          366 LKERFEEYVKIGRDKKA  382 (401)
Q Consensus       366 l~~~~~~~~~~~~~~~~  382 (401)
                      |+++++||+++.+.+..
T Consensus       292 l~~~~~~~~~~~~~~~~  308 (313)
T 3ehe_A          292 VRMAVRDLVEDLDEEGH  308 (313)
T ss_dssp             HHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHhCcccccc
Confidence            99999999988655443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.2e-39  Score=312.33  Aligned_cols=271  Identities=20%  Similarity=0.284  Sum_probs=225.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ...+|+||||    ||+||||++|+++|+++||+|++++|....                 .+++++.+|   .+.+.++
T Consensus        16 ~~~~~~vlVt----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~   74 (347)
T 4id9_A           16 PRGSHMILVT----GSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDA   74 (347)
T ss_dssp             -----CEEEE----TTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHH
T ss_pred             ccCCCEEEEE----CCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHH
Confidence            4457899999    999999999999999999999999998753                 256777777   7778888


Q ss_pred             hcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccC--CCCCCCCCCCCCCCCCCh
Q 015746          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP--ADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~--~~~~~~~E~~~~~~~~~~  211 (401)
                      +.+  +|+|||+|+.              |+.++.+++++|++.++++|||+||.++|+.  ....++.|+++..+. +.
T Consensus        75 ~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~-~~  151 (347)
T 4id9_A           75 IMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN-SP  151 (347)
T ss_dssp             HTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC-SH
T ss_pred             HhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC-Ch
Confidence            886  5999999984              5788999999999999999999999999998  566788888877664 56


Q ss_pred             HHHHHHHHH---------hCCCeEEEecCeee-------------cCCCC------------CCcHHHHHHHHHcCCCcc
Q 015746          212 VQVEKYISE---------NFSNWASFRPQYMI-------------GSGNN------------KDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       212 ~~~ek~~~e---------~g~~~~ilRp~~v~-------------G~~~~------------~~~~~~~~~~~~~~~~~~  257 (401)
                      |+..|+..|         .+++++++||+++|             |++..            ..++..++..+..++++.
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (347)
T 4id9_A          152 YGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSH  231 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeE
Confidence            665554433         38999999999999             87532            235666778888898888


Q ss_pred             cCCCCcceeee----eeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccccccc
Q 015746          258 IPGSGMQFTNI----AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK  333 (401)
Q Consensus       258 ~~~~~~~~~~~----v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  333 (401)
                      +++++.+.++|    +|++|+|++++.+++++... +++||+++++.+++.|+++.+.+.+|.+.++...+...      
T Consensus       232 ~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~------  304 (347)
T 4id9_A          232 ILARNENGRPFRMHITDTRDMVAGILLALDHPEAA-GGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDG------  304 (347)
T ss_dssp             EEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGT-TEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCC------
T ss_pred             EeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccC-CCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcc------
Confidence            99999899999    99999999999999988544 48999999999999999999999999998886655432      


Q ss_pred             ccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          334 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       334 ~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                             ....+|++|++++|||+|+++++|+|+++++||+++...
T Consensus       305 -------~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  343 (347)
T 4id9_A          305 -------VYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRLAK  343 (347)
T ss_dssp             -------CBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC-
T ss_pred             -------cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhhc
Confidence                   255689999999999999999999999999999987543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=7.8e-39  Score=310.53  Aligned_cols=301  Identities=17%  Similarity=0.231  Sum_probs=226.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHh--CCCeEEEEecCCCCcccC--CCCCCCcccchhcCCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG--SGHEVTIMTVGDENSDKM--KKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~--~g~~V~~~~r~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~D---~~~~  144 (401)
                      +.+|+||||    ||+||||++++++|++  +|++|++++|........  ..........+...++.++.+|   ++++
T Consensus         8 ~~~~~vlVT----GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            8 LENQTILIT----GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            456899999    9999999999999999  999999999976521100  0001112233344577888888   5667


Q ss_pred             HHh-hcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 015746          145 GNV-VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (401)
Q Consensus       145 ~~~-~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~  209 (401)
                      .++ ..  ++|+|||+|+.              |+.++.+++++|++.+++ |||+||.++|+.... +++|+++..|. 
T Consensus        84 ~~~~~~--~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~-  158 (362)
T 3sxp_A           84 RRLEKL--HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPE-  158 (362)
T ss_dssp             HHHTTS--CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCS-
T ss_pred             HHhhcc--CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCC-
Confidence            776 43  47999999993              578999999999999986 999999999998765 88898877764 


Q ss_pred             ChHHHHHHHHH-----hC--CCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          210 GHVQVEKYISE-----NF--SNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       210 ~~~~~ek~~~e-----~g--~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      +.|+..|...|     +.  +++++|||+++|||+...     .++..++..+..+.++.+++++.+.++|+|++|+|++
T Consensus       159 ~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  238 (362)
T 3sxp_A          159 NVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQA  238 (362)
T ss_dssp             SHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHH
Confidence            66666555544     44  789999999999998653     4677788889999998888999999999999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCC
Q 015746          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  357 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  357 (401)
                      ++.+++++..  | +||+++++.+++.|+++.+.+.+| +.++...+.+.         +.......+|++|+++.|||+
T Consensus       239 i~~~~~~~~~--g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~---------~~~~~~~~~d~~k~~~~lG~~  305 (362)
T 3sxp_A          239 NVKAMKAQKS--G-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY---------AFFQKHTQAHIEPTILDLDYT  305 (362)
T ss_dssp             HHHHTTCSSC--E-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC----------------CCCCBCCHHHHHHHCCC
T ss_pred             HHHHHhcCCC--C-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC---------cCcccceecCHHHHHHHhCCC
Confidence            9999998754  5 999999999999999999999999 77776555431         112256778999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhcC---CCccCChhhhHHHHHh
Q 015746          358 STTNLPEDLKERFEEYVKIGR---DKKAMQFEIDDKILES  394 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  394 (401)
                      |.++++|+|+++++||++...   ...+..+.++++.+..
T Consensus       306 p~~~l~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (362)
T 3sxp_A          306 PLYDLESGIKDYLPHIHAIFKGQRAKGELNSKLEGKPIPN  345 (362)
T ss_dssp             CCCCHHHHHHHHHHHHTCC---------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHhhccccccCCCceeCCccCcc
Confidence            999999999999999987643   2334444555555543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=4.3e-39  Score=306.40  Aligned_cols=275  Identities=20%  Similarity=0.268  Sum_probs=224.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .++|+||||    |||||||++++++|+++||+|++++|..........    .+.. ....+++++.+|..        
T Consensus         5 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~--------   68 (321)
T 3vps_A            5 TLKHRILIT----GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPE----GTGKFLEKPVLELEERDLS--------   68 (321)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCT----TSSEEECSCGGGCCHHHHT--------
T ss_pred             cCCCeEEEE----CCCChHHHHHHHHHHHCCCEEEEEecCCcccccchh----hhhhhccCCCeeEEeCccc--------
Confidence            347899999    999999999999999999999999998762111000    0111 11124455544433        


Q ss_pred             CcccEEEeCCCC---------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHH
Q 015746          151 VTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (401)
Q Consensus       151 ~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~e  215 (401)
                       ++|+|||+|+.               |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+..
T Consensus        69 -~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~-~~Y~~s  146 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR-SPYAAS  146 (321)
T ss_dssp             -TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHH
T ss_pred             -cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC-ChhHHH
Confidence             47999999984               5778999999999999999999999999998877889999887764 556555


Q ss_pred             H-----HHHH----hCC-CeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcC
Q 015746          216 K-----YISE----NFS-NWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (401)
Q Consensus       216 k-----~~~e----~g~-~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~  284 (401)
                      |     ++.+    .++ +++++||+++||++... .++..++..+..++++.+++++++.++|+|++|+|++++.++++
T Consensus       147 K~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~  226 (321)
T 3vps_A          147 KVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANR  226 (321)
T ss_dssp             HHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhc
Confidence            5     4443    378 99999999999998764 46778888889999999999999999999999999999999998


Q ss_pred             CCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCC-CCCHH
Q 015746          285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS-TTNLP  363 (401)
Q Consensus       285 ~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p-~~~l~  363 (401)
                      +..  | +||+++++.+++.|+++.+. .+|.+.++...+.....          .....+|++|++++|||+| .++++
T Consensus       227 ~~~--g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lG~~p~~~~~~  292 (321)
T 3vps_A          227 PLP--S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNE----------ITEFRADTALQTRQIGERSGGIGIE  292 (321)
T ss_dssp             CCC--S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTC----------CSBCCBCCHHHHHHHCCCSCCCCHH
T ss_pred             CCC--C-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCC----------cceeeccHHHHHHHhCCCCCcCCHH
Confidence            876  5 99999999999999999999 99999888776654332          2567789999999999999 88999


Q ss_pred             HHHHHHHHHHHHhcC
Q 015746          364 EDLKERFEEYVKIGR  378 (401)
Q Consensus       364 e~l~~~~~~~~~~~~  378 (401)
                      |+|+++++||++++.
T Consensus       293 ~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          293 EGIRLTLEWWQSRDL  307 (321)
T ss_dssp             HHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999998754

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=4e-38  Score=301.31  Aligned_cols=279  Identities=19%  Similarity=0.256  Sum_probs=219.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+||||    ||+||||++++++|+++||+|++++|.......          .+. .+++++.+|   .+.+.++++.
T Consensus         1 M~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~-~~~~~~~~D~~~~~~~~~~~~~   65 (330)
T 2c20_A            1 MNSILIC----GGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED----------AIT-EGAKFYNGDLRDKAFLRDVFTQ   65 (330)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG----------GSC-TTSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh----------hcC-CCcEEEECCCCCHHHHHHHHhh
Confidence            5899999    999999999999999999999999987643221          111 267788887   6677788874


Q ss_pred             CcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHH
Q 015746          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (401)
Q Consensus       151 ~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~  214 (401)
                      .++|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+.
T Consensus        66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~-~~Y~~  144 (330)
T 2c20_A           66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPT-NTYGE  144 (330)
T ss_dssp             SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCS-SHHHH
T ss_pred             cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCC-ChHHH
Confidence            357999999984                4678999999999999999999999999998777788898877653 55554


Q ss_pred             HH-----HHHH----hCCCeEEEecCeeecCCCC----------CCcHHHHHHHHHc-CCCcccCC------CCcceeee
Q 015746          215 EK-----YISE----NFSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVR-KRPVPIPG------SGMQFTNI  268 (401)
Q Consensus       215 ek-----~~~e----~g~~~~ilRp~~v~G~~~~----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~  268 (401)
                      .|     ++.+    .+++++++||+++||++..          ..++..++..+.. +.++.++|      ++++.++|
T Consensus       145 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (330)
T 2c20_A          145 TKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY  224 (330)
T ss_dssp             HHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECE
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEee
Confidence            44     4433    3899999999999999631          2244444444443 34566666      67889999


Q ss_pred             eeHHHHHHHHHHHhcCCCcC-CCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeech
Q 015746          269 AHVRDLSSMLTLAVENPEAA-SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP  347 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~~-~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (401)
                      +|++|+|++++.+++++... .+++||+++++.+++.|+++.+.+.+|.+.++...+....          ......+|+
T Consensus       225 v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~d~  294 (330)
T 2c20_A          225 IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAG----------DPARLVASS  294 (330)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSS----------CCSEECBCC
T ss_pred             EeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCC----------cccccccCH
Confidence            99999999999999865432 2589999999999999999999999998877665543221          124677899


Q ss_pred             HHHHHhcCCCCCC-CHHHHHHHHHHHHHHhcC
Q 015746          348 RAAKDILGWRSTT-NLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       348 ~k~~~~lG~~p~~-~l~e~l~~~~~~~~~~~~  378 (401)
                      +|++++|||+|.+ +++|+|+++++||+++.+
T Consensus       295 ~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~~  326 (330)
T 2c20_A          295 QKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPN  326 (330)
T ss_dssp             HHHHHHHCCCCSCCCHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHhCCCCccCCHHHHHHHHHHHHHHhhh
Confidence            9999999999998 999999999999998753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=3.3e-38  Score=304.06  Aligned_cols=289  Identities=19%  Similarity=0.204  Sum_probs=223.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch---hcCCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~D---~~~~~~~  147 (401)
                      +|+||||    ||+||||++++++|+++||+|++++|.......... .......+   ...+++++.+|   .+++.++
T Consensus         2 ~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   76 (348)
T 1ek6_A            2 AEKVLVT----GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGS-LPESLRRVQELTGRSVEFEEMDILDQGALQRL   76 (348)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSS-SBHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccc-cHHHHHHHHhccCCceEEEECCCCCHHHHHHH
Confidence            5899999    999999999999999999999999986543100000 00011111   23467888888   6677788


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCCh
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~  211 (401)
                      ++..++|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+..+.
T Consensus        77 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~  156 (348)
T 1ek6_A           77 FKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP  156 (348)
T ss_dssp             HHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSH
T ss_pred             HHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCc
Confidence            874457999999984                4678999999999999999999999999998777788998876663466


Q ss_pred             HHHHHHHHH-----h---C--CCeEEEecCeeecCCC-----------CCCcHHHHHHHHH-cCCCcccCC------CCc
Q 015746          212 VQVEKYISE-----N---F--SNWASFRPQYMIGSGN-----------NKDCEEWFFDRIV-RKRPVPIPG------SGM  263 (401)
Q Consensus       212 ~~~ek~~~e-----~---g--~~~~ilRp~~v~G~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~  263 (401)
                      |+..|...|     .   +  ++++++||+++||++.           ...++..++..+. .+.++.++|      +++
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  236 (348)
T 1ek6_A          157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCc
Confidence            665554433     2   4  8999999999999852           1235555555555 566677776      678


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccce
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH  342 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (401)
                      +.++|+|++|+|++++.+++++. ..++++||+++++.+++.|+++.+.+.+|.+.++...+.....          ...
T Consensus       237 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~  306 (348)
T 1ek6_A          237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGD----------VAA  306 (348)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTC----------CSE
T ss_pred             eEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCcc----------chh
Confidence            89999999999999999998753 2223899999999999999999999999988776555432211          246


Q ss_pred             EeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       343 ~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      ..+|++|++++|||+|+++++++|+++++||+++.
T Consensus       307 ~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~  341 (348)
T 1ek6_A          307 CYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (348)
T ss_dssp             ECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             hccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence            77899999999999999999999999999998763

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.8e-40  Score=321.66  Aligned_cols=289  Identities=22%  Similarity=0.258  Sum_probs=224.8

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----HhhHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVG  145 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~~~  145 (401)
                      .++||+||||    |||||||++|+++|+++ ||+|++++|+.++...+.          ...+++++.+|    .+.+.
T Consensus        21 ~m~~~~vlVt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------~~~~v~~~~~Dl~~d~~~~~   86 (372)
T 3slg_A           21 SMKAKKVLIL----GVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----------KHERMHFFEGDITINKEWVE   86 (372)
T ss_dssp             --CCCEEEEE----SCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----------GSTTEEEEECCTTTCHHHHH
T ss_pred             ccCCCEEEEE----CCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----------cCCCeEEEeCccCCCHHHHH
Confidence            4567899999    99999999999999998 999999999876543221          12478888887    44577


Q ss_pred             HhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC----
Q 015746          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----  205 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~----  205 (401)
                      +++++  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||.++|+.....++.|++..    
T Consensus        87 ~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~  163 (372)
T 3slg_A           87 YHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYG  163 (372)
T ss_dssp             HHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEEC
T ss_pred             HHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccC
Confidence            77775  5999999984                4677899999999999 89999999999998877788887754    


Q ss_pred             ---CCC----CChHHHHHHHHHh---CCCeEEEecCeeecCCCCC---------CcHHHHHHHHHcCCCcccCCCCccee
Q 015746          206 ---KPD----AGHVQVEKYISEN---FSNWASFRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       206 ---~~~----~~~~~~ek~~~e~---g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                         .+.    .+|+.+|+++.++   +++++++||+++||++...         .++..++..+..++++.+++++++.+
T Consensus       164 p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  243 (372)
T 3slg_A          164 PINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKR  243 (372)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEE
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEE
Confidence               221    2345556666655   8999999999999997642         26777888899999999999999999


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC-CCCCHHHHHHHHHHHhCCCceEEecCCCcccc--ccc---ccCCCc
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI--DAK---KAFPFR  339 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~-~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~--~~~---~~~~~~  339 (401)
                      +|+|++|+|++++.+++++.. ..|++||++++ +.+|+.|+++.+.+.+|.+.++...+......  ...   ...+..
T Consensus       244 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (372)
T 3slg_A          244 AFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQD  323 (372)
T ss_dssp             ECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC------------
T ss_pred             EEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccc
Confidence            999999999999999998752 23699999994 89999999999999998765433222110000  000   000012


Q ss_pred             cceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          340 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       340 ~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      .....+|++|++++|||+|+++++|+|+++++||+++
T Consensus       324 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          324 VQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             -CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             cceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999865

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=3.4e-38  Score=304.82  Aligned_cols=287  Identities=19%  Similarity=0.198  Sum_probs=224.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc-CCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      +.+|+||||    ||+||||++++++|+++|++|++++|....... +... ...+......+++++.+|   .+++.++
T Consensus        25 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   99 (352)
T 1sb8_A           25 AQPKVWLIT----GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNA   99 (352)
T ss_dssp             HSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred             ccCCeEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHH-hhhcccccCCceEEEECCCCCHHHHHHH
Confidence            457899999    999999999999999999999999997643210 0000 000000012477888888   6678888


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCCh
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~  211 (401)
                      +++  +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.
T Consensus       100 ~~~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~-~~  176 (352)
T 1sb8_A          100 CAG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL-SP  176 (352)
T ss_dssp             HTT--CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-SH
T ss_pred             hcC--CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCC-Ch
Confidence            885  5999999984                4678899999999999999999999999998766788888876654 55


Q ss_pred             HHHHH-----HHH----HhCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          212 VQVEK-----YIS----ENFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       212 ~~~ek-----~~~----e~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      |+..|     ++.    +.+++++++||+++||++...     .++..++..+..+.++.+++++++.++|+|++|+|++
T Consensus       177 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  256 (352)
T 1sb8_A          177 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA  256 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            55444     443    248999999999999997643     3566677888889888888999999999999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHh---CCCceEE--ecCCCcccccccccCCCccceEeechHHHHH
Q 015746          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA---GLPVEIV--HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD  352 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~---g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  352 (401)
                      ++.++.+.....+++||+++++.+|+.|+++.+.+.+   |.+.+..  ..+..          +.......+|++|+++
T Consensus       257 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~d~~k~~~  326 (352)
T 1sb8_A          257 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFR----------EGDVRHSLADISKAAK  326 (352)
T ss_dssp             HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCC----------TTCCSBCCBCCHHHHH
T ss_pred             HHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCC----------ccchhhccCCHHHHHH
Confidence            9999987433335899999999999999999999999   8875531  11111          1112456689999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          353 ILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       353 ~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      +|||+|+++++|+|+++++||+++
T Consensus       327 ~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          327 LLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             HTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999999999865

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=9.8e-39  Score=311.64  Aligned_cols=295  Identities=15%  Similarity=0.202  Sum_probs=222.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+|+||||    ||+||||++++++|+++| ++|++++|........       +.  ...+++++.+|   ++++.++
T Consensus        30 ~~~~~ilVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-------l~--~~~~v~~~~~Dl~d~~~l~~~   96 (377)
T 2q1s_A           30 LANTNVMVV----GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN-------VP--DHPAVRFSETSITDDALLASL   96 (377)
T ss_dssp             GTTCEEEEE----TTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG-------SC--CCTTEEEECSCTTCHHHHHHC
T ss_pred             hCCCEEEEE----CCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh-------cc--CCCceEEEECCCCCHHHHHHH
Confidence            457899999    999999999999999999 9999999986543210       00  12367778887   6667777


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCCEEEEecccccccCCCCCCCC--CCC---CC
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV--EGD---VV  205 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~~~~~~~~--E~~---~~  205 (401)
                      +++  +|+|||+|+.                |+.++.+++++|++. ++++|||+||.++|+.....++.  |++   +.
T Consensus        97 ~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~  174 (377)
T 2q1s_A           97 QDE--YDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSL  174 (377)
T ss_dssp             CSC--CSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCS
T ss_pred             hhC--CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccc
Confidence            775  5999999984                367899999999999 99999999999999987666777  776   33


Q ss_pred             -CCCCChHHHHH-----HHHH----hCCCeEEEecCeeecCCC---------C-----CCcHHHHHHHHHcCCCcccCCC
Q 015746          206 -KPDAGHVQVEK-----YISE----NFSNWASFRPQYMIGSGN---------N-----KDCEEWFFDRIVRKRPVPIPGS  261 (401)
Q Consensus       206 -~~~~~~~~~ek-----~~~e----~g~~~~ilRp~~v~G~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~  261 (401)
                       .+ .+.|+..|     ++.+    .+++++++||+++||++.         .     ..++..++..+..+.++.++++
T Consensus       175 ~~~-~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  253 (377)
T 2q1s_A          175 HNN-DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENG  253 (377)
T ss_dssp             SCC-CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGG
T ss_pred             cCC-CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCC
Confidence             33 35555444     4433    389999999999999976         3     3467778888889998888888


Q ss_pred             CcceeeeeeHHHHHHH-HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCcc
Q 015746          262 GMQFTNIAHVRDLSSM-LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN  340 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~-~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  340 (401)
                      +++.++|+|++|+|++ ++.+++++.  .| +||+++++.+++.|+++.+.+.+|.+.++...+....          ..
T Consensus       254 g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~----------~~  320 (377)
T 2q1s_A          254 GVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKETSIADLATKINEITGNNTELDRLPKRPW----------DN  320 (377)
T ss_dssp             GCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGG----------GC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCcc----------cc
Confidence            8899999999999999 999998865  35 9999999999999999999999998876544432211          11


Q ss_pred             c-eEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccCChhhhHHHHHhcC
Q 015746          341 M-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK  396 (401)
Q Consensus       341 ~-~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (401)
                      . ...+|++|++++|||+|.++++|+|+++++||+++... ...-....|.+|+.++
T Consensus       321 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  376 (377)
T 2q1s_A          321 SGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLAV-IEQIMRKHDSALATYG  376 (377)
T ss_dssp             C-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHTHHH-HHHHHHTTHHHHHHCC
T ss_pred             ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhhh-hhheeeccchHHhhcc
Confidence            3 56789999999999999999999999999999875321 1222235556666665

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=3.4e-38  Score=299.51  Aligned_cols=270  Identities=20%  Similarity=0.271  Sum_probs=217.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+||||++++++|+++||+|++++|.......          .+ ..+++++.+|   ++++.++++..
T Consensus         1 m~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~----------~~-~~~~~~~~~Dl~~~~~~~~~~~~~   65 (311)
T 2p5y_A            1 MRVLVT----GGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE----------NV-PKGVPFFRVDLRDKEGVERAFREF   65 (311)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG----------GS-CTTCCEECCCTTCHHHHHHHHHHH
T ss_pred             CEEEEE----eCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh----------hc-ccCeEEEECCCCCHHHHHHHHHhc
Confidence            589999    999999999999999999999999885432211          01 1256677777   66777888743


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEeccc-ccccC-CCCCCCCCCCCCCCCCChHH
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSA-GIYKP-ADEPPHVEGDVVKPDAGHVQ  213 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~-~vy~~-~~~~~~~E~~~~~~~~~~~~  213 (401)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||. ++|+. ....+++|+++..+. +.|+
T Consensus        66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~-~~Y~  144 (311)
T 2p5y_A           66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK-SPYA  144 (311)
T ss_dssp             CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC-SHHH
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC-ChHH
Confidence            46999999984                46788999999999999999999999 89986 445678888766543 5565


Q ss_pred             HHHHHHH---------hCCCeEEEecCeeecCCCCCC----cHHHHHHHHHcCCCcccC-----CCCcceeeeeeHHHHH
Q 015746          214 VEKYISE---------NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIP-----GSGMQFTNIAHVRDLS  275 (401)
Q Consensus       214 ~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~v~D~a  275 (401)
                      ..|...|         .+++++++||+++|||+....    ++..++..+..+.++.++     +++.+.++|+|++|+|
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  224 (311)
T 2p5y_A          145 ASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVA  224 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHH
Confidence            5553333         489999999999999976532    456677788888888777     8888999999999999


Q ss_pred             HHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcC
Q 015746          276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG  355 (401)
Q Consensus       276 ~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG  355 (401)
                      ++++.+++++    +++||+++++.+|++|+++.+.+.+|.+.++...+.....          .....+|++|+++ ||
T Consensus       225 ~a~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~-lg  289 (311)
T 2p5y_A          225 EAHALALFSL----EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGD----------LERSVLSPLKLMA-HG  289 (311)
T ss_dssp             HHHHHHHHHC----CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTC----------CSBCCBCCHHHHT-TT
T ss_pred             HHHHHHHhCC----CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccc----------hhhccCCHHHHHH-CC
Confidence            9999999864    4899999999999999999999999988777655543211          2456789999999 99


Q ss_pred             CCCCCCHHHHHHHHHHHHHH
Q 015746          356 WRSTTNLPEDLKERFEEYVK  375 (401)
Q Consensus       356 ~~p~~~l~e~l~~~~~~~~~  375 (401)
                      |+|.++++|+|+++++||++
T Consensus       290 ~~p~~~~~~~l~~~~~~~~~  309 (311)
T 2p5y_A          290 WRPKVGFQEGIRLTVDHFRG  309 (311)
T ss_dssp             CCCSSCHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHh
Confidence            99999999999999999975

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=4.6e-38  Score=299.72  Aligned_cols=274  Identities=20%  Similarity=0.241  Sum_probs=220.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+||||++++++|+++||+|++++|.... ..           +   +++++.+|   ++++.+++
T Consensus        10 ~~~~~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l---~~~~~~~Dl~d~~~~~~~~   70 (321)
T 2pk3_A           10 HGSMRALIT----GVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------P---NVEMISLDIMDSQRVKKVI   70 (321)
T ss_dssp             ---CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------T---TEEEEECCTTCHHHHHHHH
T ss_pred             cCcceEEEE----CCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------c---eeeEEECCCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998753 11           1   56677777   67788888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCCEEEEecccccccCC--CCCCCCCCCCCCCCC
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDA  209 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~~--~~~~~~E~~~~~~~~  209 (401)
                      ++.++|+|||+|+.                |+.++.+++++|++. ++++|||+||.++|+..  ...+++|+++..+. 
T Consensus        71 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~-  149 (321)
T 2pk3_A           71 SDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPM-  149 (321)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC-
T ss_pred             HhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC-
Confidence            76457999999984                467799999999886 68899999999999976  56688888876554 


Q ss_pred             ChHHHHH-----HHHHh----CCCeEEEecCeeecCCCCCC-cHHHHHHHHHc---C--CCcccCCCCcceeeeeeHHHH
Q 015746          210 GHVQVEK-----YISEN----FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVR---K--RPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       210 ~~~~~ek-----~~~e~----g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~---~--~~~~~~~~~~~~~~~v~v~D~  274 (401)
                      +.|+..|     ++...    |++++++||+++||++.... .+..++..+..   +  .++.+++++.+.++|+|++|+
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dv  229 (321)
T 2pk3_A          150 SPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDI  229 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHH
Confidence            5565544     44333    89999999999999987543 55666666666   6  577788888899999999999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhc
Q 015746          275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL  354 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  354 (401)
                      |++++.+++++..  |++||+++++.+++.|+++.+.+.+|.+.++...+...        .+.....+.+|++|++++|
T Consensus       230 a~a~~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~--------~~~~~~~~~~d~~k~~~~l  299 (321)
T 2pk3_A          230 VQAYWLLSQYGKT--GDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQL--------RPSEVPTLIGSNKRLKDST  299 (321)
T ss_dssp             HHHHHHHHHHCCT--TCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGC--------CSSCCSBCCBCCHHHHHHH
T ss_pred             HHHHHHHHhCCCC--CCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccC--------CCcccchhccCHHHHHHHc
Confidence            9999999987633  58999999999999999999999999987776544211        0112255778999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHH
Q 015746          355 GWRSTTNLPEDLKERFEEYVK  375 (401)
Q Consensus       355 G~~p~~~l~e~l~~~~~~~~~  375 (401)
                      ||+|.++++|+|+++++||++
T Consensus       300 G~~p~~~~~e~l~~~~~~~~~  320 (321)
T 2pk3_A          300 GWKPRIPLEKSLFEILQSYRQ  320 (321)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHT
T ss_pred             CCCcCCCHHHHHHHHHHHHhc
Confidence            999998999999999999975

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=6e-38  Score=302.28  Aligned_cols=299  Identities=15%  Similarity=0.173  Sum_probs=230.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ||+||||    ||+||||++++++|+++  ||+|++++|.......      ..+..+...+++++.+|   .+++.+++
T Consensus         4 m~~vlVT----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (348)
T 1oc2_A            4 FKNIIVT----GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK------ANLEAILGDRVELVVGDIADAELVDKLA   73 (348)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG------GGTGGGCSSSEEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEe----CCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh------hHHhhhccCCeEEEECCCCCHHHHHHHh
Confidence            6899999    99999999999999999  8999999997532110      01122223477888887   67788888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCC------------CCCC
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE------------PPHV  200 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~------------~~~~  200 (401)
                      +++  |+|||+|+.                |+.++.+++++|++.++ +|||+||.++|+....            .+++
T Consensus        74 ~~~--d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~  150 (348)
T 1oc2_A           74 AKA--DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT  150 (348)
T ss_dssp             TTC--SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred             hcC--CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcC
Confidence            886  999999984                46779999999999988 9999999999986532            5778


Q ss_pred             CCCCCCCCCChHHHHH-----HHHH----hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          201 EGDVVKPDAGHVQVEK-----YISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek-----~~~e----~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                      |+++..+. +.|+..|     ++..    .+++++++||+++||++... .++..++..+..+.++.+++++.+.++|+|
T Consensus       151 E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  229 (348)
T 1oc2_A          151 AETNYNPS-SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIH  229 (348)
T ss_dssp             TTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred             CCCCCCCC-CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEE
Confidence            87766553 5565554     3332    38999999999999998653 456677888888888888898999999999


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHH
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRA  349 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  349 (401)
                      ++|+|++++.+++++..  |++||+++++.+++.|+++.+.+.+|.+.. +...+...          .....+.+|++|
T Consensus       230 v~Dva~~~~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~~d~~k  297 (348)
T 1oc2_A          230 TNDHSTGVWAILTKGRM--GETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRA----------GHDLRYAIDASK  297 (348)
T ss_dssp             HHHHHHHHHHHHHHCCT--TCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCT----------TCCCBCCBCCHH
T ss_pred             HHHHHHHHHHHhhCCCC--CCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCC----------CcccccccCHHH
Confidence            99999999999986543  689999999999999999999999998643 22222111          111345689999


Q ss_pred             HHHhcCCCCCCC-HHHHHHHHHHHHHHhcCCCccCChhhhHHHHHhcCCCC
Q 015746          350 AKDILGWRSTTN-LPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI  399 (401)
Q Consensus       350 ~~~~lG~~p~~~-l~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (401)
                      ++++|||+|+++ ++|+|+++++||+++.... ..-.+..++.+++++.++
T Consensus       298 ~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  347 (348)
T 1oc2_A          298 LRDELGWTPQFTDFSEGLEETIQWYTDNQDWW-KAEKEAVEANYAKTQEVI  347 (348)
T ss_dssp             HHHHHCCCCSCCCHHHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTCCBC
T ss_pred             HHHHcCCCCCCCcHHHHHHHHHHHHHHhhhhc-cchHHHHHhhhHhhhhhc
Confidence            999999999988 9999999999999764211 112335666777766543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.3e-38  Score=300.74  Aligned_cols=268  Identities=19%  Similarity=0.267  Sum_probs=215.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ++|+||||    ||+||||++++++|+++||+|+++.|...                      ....|.+++.++++..+
T Consensus         2 ~~~~ilVt----GatG~iG~~l~~~L~~~g~~v~~~~r~~~----------------------~D~~d~~~~~~~~~~~~   55 (321)
T 1e6u_A            2 AKQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASER   55 (321)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCeEEEEecCcc----------------------CCccCHHHHHHHHHhcC
Confidence            35799999    99999999999999999999999887531                      01126788888887334


Q ss_pred             ccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC----CCCCCCCh
Q 015746          153 FDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGH  211 (401)
Q Consensus       153 ~d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~----~~~~~~~~  211 (401)
                      +|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+.....+++|++    +..+..+.
T Consensus        56 ~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  135 (321)
T 1e6u_A           56 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEP  135 (321)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHH
T ss_pred             CCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCc
Confidence            6999999984                 45788999999999999999999999999987667888876    33332234


Q ss_pred             HH-----HHHHHHH----hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHc----C-CCcccCCCCcceeeeeeHH
Q 015746          212 VQ-----VEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVR----K-RPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       212 ~~-----~ek~~~e----~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~v~v~  272 (401)
                      |+     +|+++.+    .+++++++||+++||++...     .++..++..+..    | .++.+++++++.++|+|++
T Consensus       136 Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~  215 (321)
T 1e6u_A          136 YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD  215 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHH
Confidence            54     4544444    38999999999999997652     456667777654    3 5777788899999999999


Q ss_pred             HHHHHHHHHhcCCCcC-------CCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEee
Q 015746          273 DLSSMLTLAVENPEAA-------SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA  345 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~-------~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (401)
                      |+|++++.+++++...       .+++||+++++.+++.|+++.+.+.+|.+.++...+....          ......+
T Consensus       216 Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~  285 (321)
T 1e6u_A          216 DMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPD----------GTPRKLL  285 (321)
T ss_dssp             HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCC----------CCSBCCB
T ss_pred             HHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCC----------CcccccC
Confidence            9999999999887542       2479999999999999999999999999877765543221          1245678


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      |++|+++ |||+|+++++|+|+++++||+++.
T Consensus       286 d~~k~~~-lG~~p~~~~~~~l~~~~~~~~~~~  316 (321)
T 1e6u_A          286 DVTRLHQ-LGWYHEISLEAGLASTYQWFLENQ  316 (321)
T ss_dssp             CCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHh-cCCccCCcHHHHHHHHHHHHHHHH
Confidence            9999999 999999999999999999998764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=4e-37  Score=295.34  Aligned_cols=278  Identities=15%  Similarity=0.254  Sum_probs=220.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC---C---CeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS---G---HEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEV  144 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~  144 (401)
                      |+||||    ||+||||++++++|+++   |   ++|++++|.......      ..+..+. ..+++++.+|   ++++
T Consensus         1 M~vlVT----GatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~   70 (337)
T 1r6d_A            1 MRLLVT----GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR------ANLAPVDADPRLRFVHGDIRDAGLL   70 (337)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG------GGGGGGTTCTTEEEEECCTTCHHHH
T ss_pred             CeEEEE----CCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch------hhhhhcccCCCeEEEEcCCCCHHHH
Confidence            689999    99999999999999997   8   999999997532110      0111111 2467788887   6677


Q ss_pred             HHhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~  208 (401)
                      .+++.+  +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+.
T Consensus        71 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  148 (337)
T 1r6d_A           71 ARELRG--VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN  148 (337)
T ss_dssp             HHHTTT--CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC
T ss_pred             HHHhcC--CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCC
Confidence            788855  5999999984                4678999999999999999999999999997666678888766553


Q ss_pred             CChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          209 AGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       209 ~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                       +.|+..|...|         .+++++++||+++||++... .++..++..+..++++.+++++.+.++|+|++|+|+++
T Consensus       149 -~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  227 (337)
T 1r6d_A          149 -SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (337)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             -CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence             55665443332         48999999999999998643 45667788888888888889999999999999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHHHHhcCCC
Q 015746          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  357 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  357 (401)
                      +.+++++..  |++||+++++.+++.|+++.+.+.+|.+.+ +...+...          .....+.+|++|++++|||+
T Consensus       228 ~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~  295 (337)
T 1r6d_A          228 ALVLAGGRA--GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRK----------GHDLRYSLDGGKIERELGYR  295 (337)
T ss_dssp             HHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCT----------TCCCBCCBCCHHHHHHHCCC
T ss_pred             HHHHhCCCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCC----------CCcceeecCHHHHHHHcCCC
Confidence            999987543  689999999999999999999999998753 32222211          11134568999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhc
Q 015746          358 STTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~~~  377 (401)
                      |.++++|+|+++++||+++.
T Consensus       296 p~~~~~e~l~~~~~~~~~~~  315 (337)
T 1r6d_A          296 PQVSFADGLARTVRWYRENR  315 (337)
T ss_dssp             CCSCHHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHHHHhch
Confidence            99999999999999998763

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=2.8e-37  Score=301.54  Aligned_cols=274  Identities=19%  Similarity=0.176  Sum_probs=221.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +||+||||    ||+||||++++++|+++||+|++++|+......           ....+++++.+|   .+++.++++
T Consensus        28 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           28 ENLKISIT----GAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-----------EDMFCDEFHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             SCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-----------GGGTCSEEEECCTTSHHHHHHHHT
T ss_pred             cCCeEEEE----CCccHHHHHHHHHHHHCCCeEEEEECCCccchh-----------hccCCceEEECCCCCHHHHHHHhC
Confidence            57899999    999999999999999999999999998754321           112467888888   667888887


Q ss_pred             CCcccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCC-----CCCCCCC--CC
Q 015746          150 GVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-----PPHVEGD--VV  205 (401)
Q Consensus       150 ~~~~d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~-----~~~~E~~--~~  205 (401)
                      +  +|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+....     .+++|++  +.
T Consensus        93 ~--~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~  170 (379)
T 2c5a_A           93 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA  170 (379)
T ss_dssp             T--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred             C--CCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCC
Confidence            6  5999999983                 4567899999999999999999999999985421     3466665  32


Q ss_pred             CCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCC-cccCCCCcceeeeee
Q 015746          206 KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRP-VPIPGSGMQFTNIAH  270 (401)
Q Consensus       206 ~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~  270 (401)
                      .+ .+.|+..|...|         .++++++|||+++||++...     ..+..++..+..+.+ +.+++++.+.++|+|
T Consensus       171 ~~-~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  249 (379)
T 2c5a_A          171 EP-QDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF  249 (379)
T ss_dssp             CC-SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred             CC-CChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEE
Confidence            22 355655443332         48999999999999997643     256777888877776 778899999999999


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHH
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA  350 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  350 (401)
                      ++|+|++++.+++++.   +++||+++++.+++.|+++.+.+.+|.+.++..++... +          .....+|++|+
T Consensus       250 v~Dva~ai~~~l~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-~----------~~~~~~d~~k~  315 (379)
T 2c5a_A          250 IDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-G----------VRGRNSDNNLI  315 (379)
T ss_dssp             HHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-C----------CSBCEECCHHH
T ss_pred             HHHHHHHHHHHhhccC---CCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC-C----------cccccCCHHHH
Confidence            9999999999998762   48999999999999999999999999987776665422 1          13456899999


Q ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          351 KDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       351 ~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      +++|||+|+++++|+|+++++||+++..
T Consensus       316 ~~~lG~~p~~~l~e~l~~~~~~~~~~~~  343 (379)
T 2c5a_A          316 KEKLGWAPNMRLKEGLRITYFWIKEQIE  343 (379)
T ss_dssp             HHHHSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhHh
Confidence            9999999999999999999999987643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-37  Score=297.22  Aligned_cols=285  Identities=16%  Similarity=0.143  Sum_probs=220.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~  147 (401)
                      .++|+||||    ||+||||++++++|+++||+|++++|+......      ..+..+ ...+++++.+|   .+++.++
T Consensus        12 ~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   81 (335)
T 1rpn_A           12 SMTRSALVT----GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR------WRLRELGIEGDIQYEDGDMADACSVQRA   81 (335)
T ss_dssp             ---CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC------HHHHHTTCGGGEEEEECCTTCHHHHHHH
T ss_pred             ccCCeEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCCccccc------cchhhccccCceEEEECCCCCHHHHHHH
Confidence            457899999    999999999999999999999999998754210      011111 12357778887   6778888


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-CEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      +++.++|+|||+|+.                |+.++.+++++|++.++ ++|||+||.++|+.....+++|+++..+. +
T Consensus        82 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~-~  160 (335)
T 1rpn_A           82 VIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR-S  160 (335)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC-S
T ss_pred             HHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC-C
Confidence            877668999999984                45678999999999986 89999999999998776788888877664 5


Q ss_pred             hHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCc----HHHHHHHHHcCCC-cccCCCCcceeeeeeHHHHHH
Q 015746          211 HVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSS  276 (401)
Q Consensus       211 ~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~  276 (401)
                      .|+..|...|         .+++++++||+++|||+....+    +..++..+..++. ...++++++.++|+|++|+|+
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~  240 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  240 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence            5655554333         3899999999999999765443    3445566666764 345688899999999999999


Q ss_pred             HHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHHHHhcC
Q 015746          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG  355 (401)
Q Consensus       277 ~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG  355 (401)
                      +++.+++++.   +++||+++++.+++.|+++.+.+.+|.+.. ...+++..       ..+.....+.+|++|++++||
T Consensus       241 a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lG  310 (335)
T 1rpn_A          241 AMWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF-------FRPAEVDVLLGNPAKAQRVLG  310 (335)
T ss_dssp             HHHHHHHSSS---CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG-------CCSSCCCBCCBCTHHHHHHHC
T ss_pred             HHHHHHhcCC---CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc-------cCCCcchhhcCCHHHHHHhcC
Confidence            9999998865   279999999999999999999999998642 11222110       011222456689999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhc
Q 015746          356 WRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       356 ~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      |+|+++++|+|+++++||+++.
T Consensus       311 ~~p~~~l~e~l~~~~~~~~~~~  332 (335)
T 1rpn_A          311 WKPRTSLDELIRMMVEADLRRV  332 (335)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHHhh
Confidence            9999999999999999998763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=3.8e-37  Score=295.22  Aligned_cols=277  Identities=18%  Similarity=0.200  Sum_probs=217.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCC--cccCCCCCCCcccchh-cCCCeEEEcC---HhhH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDEN--SDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEV  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~--~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~  144 (401)
                      .+|+||||    ||+||||++++++|+++|  ++|++++|....  ...+        ..+. ..+++++.+|   .+.+
T Consensus         2 ~~m~vlVT----GatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~Dl~d~~~~   69 (336)
T 2hun_A            2 HSMKLLVT----GGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL--------KDLEDDPRYTFVKGDVADYELV   69 (336)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG--------TTTTTCTTEEEEECCTTCHHHH
T ss_pred             CCCeEEEE----CCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH--------hhhccCCceEEEEcCCCCHHHH
Confidence            35789999    999999999999999996  899999987521  1111        1111 2367788887   6677


Q ss_pred             HHhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-CEEEEecccccccCCCCCCCCCCCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKP  207 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~~~~~~E~~~~~~  207 (401)
                      .+++.+  +|+|||+|+.                |+.++.+++++|++.+. ++|||+||.++|+.....+++|+++..+
T Consensus        70 ~~~~~~--~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  147 (336)
T 2hun_A           70 KELVRK--VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMP  147 (336)
T ss_dssp             HHHHHT--CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC
T ss_pred             HHHhhC--CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCC
Confidence            788855  5999999994                46789999999998875 6999999999999776678888877655


Q ss_pred             CCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          208 DAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       208 ~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      . +.|+..|...|         .+++++++||+++||++... .++..++..+..++++.+++++.+.++|+|++|+|++
T Consensus       148 ~-~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  226 (336)
T 2hun_A          148 S-SPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRA  226 (336)
T ss_dssp             C-SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHH
T ss_pred             C-CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHH
Confidence            3 56665554333         48999999999999998643 3566778888888888888999999999999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHHHHhcCC
Q 015746          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW  356 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~  356 (401)
                      ++.+++++..  |++||+++++.+++.|+++.+.+.+|.+.+ +...+...          .....+.+|++|++++|||
T Consensus       227 ~~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~  294 (336)
T 2hun_A          227 IELVLLKGES--REIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRP----------GHDLRYSLDSWKITRDLKW  294 (336)
T ss_dssp             HHHHHHHCCT--TCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCT----------TCCCCCCBCCHHHHHHHCC
T ss_pred             HHHHHhCCCC--CCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCC----------CchhhhcCCHHHHHHHhCC
Confidence            9999986543  689999999999999999999999998643 22222211          1113456899999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHh
Q 015746          357 RSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       357 ~p~~~l~e~l~~~~~~~~~~  376 (401)
                      +|.++++|+|+++++||+++
T Consensus       295 ~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          295 RPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             CCSSCHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHhC
Confidence            99999999999999999876

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=2.5e-37  Score=296.90  Aligned_cols=285  Identities=22%  Similarity=0.281  Sum_probs=215.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+||||++++++|+++||+|++++|........    ...+..+...++.++.+|   ++++.+++++.
T Consensus         1 m~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   72 (338)
T 1udb_A            1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSV----LPVIERLGGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTH----HHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhH----HHHHHhhcCCcceEEEccCCCHHHHHHHhhcc
Confidence            589999    9999999999999999999999998754322110    001111112357778887   66777787755


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHH
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~e  215 (401)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+.....+++|+.+..+..+.|+..
T Consensus        73 ~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~s  152 (338)
T 1udb_A           73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHH
Confidence            67999999984                46788999999999999999999999999977667788887765434666655


Q ss_pred             HHHHH---------h-CCCeEEEecCeeecCCCC-----------CCcHHHHHHHHH-cCCCcccCC------CCcceee
Q 015746          216 KYISE---------N-FSNWASFRPQYMIGSGNN-----------KDCEEWFFDRIV-RKRPVPIPG------SGMQFTN  267 (401)
Q Consensus       216 k~~~e---------~-g~~~~ilRp~~v~G~~~~-----------~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~  267 (401)
                      |...|         . +++++++||+++||++..           ..++..++.... .+.++.+++      ++.+.++
T Consensus       153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  232 (338)
T 1udb_A          153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD  232 (338)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeee
Confidence            54433         2 689999999999998421           223444444444 344455544      5678899


Q ss_pred             eeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeec
Q 015746          268 IAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE  346 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (401)
                      |+|++|+|++++.++++.. ..++++||+++++++|+.|+++.+.+.+|.+.++...+.....          ...+.+|
T Consensus       233 ~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d  302 (338)
T 1udb_A          233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGD----------LPAYWAD  302 (338)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTC----------CSBCCBC
T ss_pred             eEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCc----------hhhhhcC
Confidence            9999999999999997642 2223799999999999999999999999988766554432211          1356689


Q ss_pred             hHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          347 PRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       347 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      ++|++++|||+|+++++|+|+++++||+++.
T Consensus       303 ~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~  333 (338)
T 1udb_A          303 ASKADRELNWRVTRTLDEMAQDTWHWQSRHP  333 (338)
T ss_dssp             CHHHHHHHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCCcCCCHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999998764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=9.4e-38  Score=302.20  Aligned_cols=290  Identities=17%  Similarity=0.120  Sum_probs=222.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +.+|+||||    ||+||||++++++|+++||+|++++|+..+...+..    .+.  ...+++++.+|   ++.+.+++
T Consensus         7 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~--~~~~~~~~~~Dl~d~~~~~~~~   76 (357)
T 1rkx_A            7 WQGKRVFVT----GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE----TAR--VADGMQSEIGDIRDQNKLLESI   76 (357)
T ss_dssp             HTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH----HTT--TTTTSEEEECCTTCHHHHHHHH
T ss_pred             hCCCEEEEE----CCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhH----hhc--cCCceEEEEccccCHHHHHHHH
Confidence            346899999    999999999999999999999999998755432110    000  12467888888   66777888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCC-CCEEEEecccccccCCCC-CCCCCCCCCCCCCC
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADE-PPHVEGDVVKPDAG  210 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~-~~~~E~~~~~~~~~  210 (401)
                      ++.++|+|||+|+.                |+.++.+++++|++.+ +++|||+||.++|+.... .++.|+++..+. +
T Consensus        77 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~-~  155 (357)
T 1rkx_A           77 REFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-D  155 (357)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS-S
T ss_pred             HhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC-C
Confidence            76567999999983                5678899999999886 889999999999997643 367777665543 5


Q ss_pred             hHHH-----HHHHHHh-------------CCCeEEEecCeeecCCCC--CCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          211 HVQV-----EKYISEN-------------FSNWASFRPQYMIGSGNN--KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       211 ~~~~-----ek~~~e~-------------g~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                      .|+.     |+++...             +++++++||+++||++..  ..++..++..+..+.++.++ ++.+.++|+|
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~  234 (357)
T 1rkx_A          156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQH  234 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEe
Confidence            5554     4444332             899999999999999764  24677788888888887665 4678899999


Q ss_pred             HHHHHHHHHHHhcC---CCcCCCcEEEecCC--CCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEee
Q 015746          271 VRDLSSMLTLAVEN---PEAASSNIFNLVSD--RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA  345 (401)
Q Consensus       271 v~D~a~~~~~~~~~---~~~~~g~~~~~~~~--~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (401)
                      ++|+|++++.+++.   .....+++||++++  +.+++.|+++.+.+.+|.+.++...+...         +.....+.+
T Consensus       235 v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~  305 (357)
T 1rkx_A          235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---------PHEAHYLKL  305 (357)
T ss_dssp             THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC----------------CCCCCCB
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCC---------CcCcccccC
Confidence            99999999999874   21122589999974  68999999999999999877654322110         112255678


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCcc
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA  382 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~  382 (401)
                      |++|++++|||+|.++++|+|+++++||+++.....+
T Consensus       306 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~  342 (357)
T 1rkx_A          306 DCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSGTDM  342 (357)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCCH
T ss_pred             CHHHHHHHhCCCcCCcHHHHHHHHHHHHHHHhcCCcc
Confidence            9999999999999999999999999999987655443

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1e-37  Score=300.29  Aligned_cols=283  Identities=17%  Similarity=0.272  Sum_probs=217.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ||+||||    ||+||||++++++|+++|++|++++|........      ....+. ..+++++.+|   .+++.++++
T Consensus         1 M~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~   70 (347)
T 1orr_A            1 MAKLLIT----GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATD------NLHWLSSLGNFEFVHGDIRNKNDVTRLIT   70 (347)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHH------HHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CcEEEEe----CCCchhHHHHHHHHHhCCCEEEEEeCCCccCchh------hhhhhccCCceEEEEcCCCCHHHHHHHHh
Confidence            5799999    9999999999999999999999999854211100      011111 1247788887   677888887


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC-EEEEecccccccCCCCCC--------------
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPP--------------  198 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~~~--------------  198 (401)
                      +.++|+|||+|+.                |+.++.+++++|++.+++ +|||+||.++|+.....+              
T Consensus        71 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~  150 (347)
T 1orr_A           71 KYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP  150 (347)
T ss_dssp             HHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred             ccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccc
Confidence            6446999999984                567889999999999886 999999999998754433              


Q ss_pred             --CCCCCCCCCCCChHHH-----HHHHHH----hCCCeEEEecCeeecCCCCC----CcHHHHHHHHHcCC-----Cccc
Q 015746          199 --HVEGDVVKPDAGHVQV-----EKYISE----NFSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKR-----PVPI  258 (401)
Q Consensus       199 --~~E~~~~~~~~~~~~~-----ek~~~e----~g~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~-----~~~~  258 (401)
                        ++|+.+..+. +.|+.     |+++.+    .++++++|||++|||+....    ..+..++..+..+.     ++.+
T Consensus       151 ~~~~e~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (347)
T 1orr_A          151 NGYDESTQLDFH-SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTI  229 (347)
T ss_dssp             TCBCTTSCCCCC-HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             cCccccCCCCCC-CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEE
Confidence              4455444432 44554     444433    38999999999999997543    24566666766665     6778


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC--CCCHHHHHHHHHHHhCCCceEEecCCCcccccccccC
Q 015746          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR--AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF  336 (401)
Q Consensus       259 ~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~--~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  336 (401)
                      ++++++.++|+|++|+|++++.++++.....|++||+++++  ++++.|+++.+.+.+|.+.++...+....        
T Consensus       230 ~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------  301 (347)
T 1orr_A          230 SGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRES--------  301 (347)
T ss_dssp             ESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSS--------
T ss_pred             ecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCC--------
Confidence            89999999999999999999999986332336899999986  49999999999999999877766553211        


Q ss_pred             CCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          337 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       337 ~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                        ....+.+|++|++++|||+|.++++|+|+++++||+++.
T Consensus       302 --~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  340 (347)
T 1orr_A          302 --DQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSIL  340 (347)
T ss_dssp             --CCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred             --CcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence              124577899999999999998899999999999999764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=8.1e-38  Score=300.75  Aligned_cols=288  Identities=18%  Similarity=0.210  Sum_probs=219.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH----hhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~~~~~~~  149 (401)
                      |+||||    ||+||||++++++|+++ ||+|++++|+..+...+.          ...+++++.+|.    +.+.++++
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~   66 (345)
T 2bll_A            1 MRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYHVK   66 (345)
T ss_dssp             CEEEEE----TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------TCTTEEEEECCTTTCSHHHHHHHH
T ss_pred             CeEEEE----CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----------cCCCeEEEeccccCcHHHHHhhcc
Confidence            689999    99999999999999998 899999999875443211          123678888883    34667777


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCC---C---
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK---P---  207 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~---~---  207 (401)
                      +  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||.++|+.....+++|+++..   +   
T Consensus        67 ~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~  143 (345)
T 2bll_A           67 K--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  143 (345)
T ss_dssp             H--CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTC
T ss_pred             C--CCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccC
Confidence            5  5999999984                3567889999999999 899999999999987666778876531   1   


Q ss_pred             CCChHH-----HHHHHH----HhCCCeEEEecCeeecCCCCC---------CcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          208 DAGHVQ-----VEKYIS----ENFSNWASFRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       208 ~~~~~~-----~ek~~~----e~g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                      +.+.|+     +|+++.    +.+++++++||+++||++...         ..+..++..+..++++.+++++.+.++|+
T Consensus       144 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  223 (345)
T 2bll_A          144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT  223 (345)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECE
T ss_pred             cccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEE
Confidence            122455     444443    248999999999999997542         24667788888899888888888999999


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC-CCCHHHHHHHHHHHhCCCceEEecCCCcccccc--cccC---CCccce
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA--KKAF---PFRNMH  342 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~-~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--~~~~---~~~~~~  342 (401)
                      |++|+|++++.+++++.. ..|++||+++++ .+|+.|+++.+.+.+|.+.....++........  ...+   ......
T Consensus       224 ~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (345)
T 2bll_A          224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEH  303 (345)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCC
T ss_pred             EHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhh
Confidence            999999999999987642 235899999986 899999999999999876543333332110000  0000   011245


Q ss_pred             EeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       343 ~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      ..+|++|++++|||+|+++++++|+++++||+++.+.
T Consensus       304 ~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~  340 (345)
T 2bll_A          304 RKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  340 (345)
T ss_dssp             CCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred             hcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCCC
Confidence            6689999999999999999999999999999987543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-37  Score=292.64  Aligned_cols=260  Identities=15%  Similarity=0.164  Sum_probs=216.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |+||||    ||+||||++++++|+++||+|++++|..-                   ++    .|.+.+.++++..++|
T Consensus         6 m~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------------D~----~d~~~~~~~~~~~~~d   58 (287)
T 3sc6_A            6 ERVIIT----GANGQLGKQLQEELNPEEYDIYPFDKKLL-------------------DI----TNISQVQQVVQEIRPH   58 (287)
T ss_dssp             EEEEEE----STTSHHHHHHHHHSCTTTEEEEEECTTTS-------------------CT----TCHHHHHHHHHHHCCS
T ss_pred             eEEEEE----CCCCHHHHHHHHHHHhCCCEEEEeccccc-------------------CC----CCHHHHHHHHHhcCCC
Confidence            499999    99999999999999999999999999431                   11    2688888888854579


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH-----
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ-----  213 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~-----  213 (401)
                      +|||+|+.                |+.++.+++++|++.++ +|||+||.++|+.....+++|+++..|. +.|+     
T Consensus        59 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~-~~Y~~sK~~  136 (287)
T 3sc6_A           59 IIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPI-NIYGASKYA  136 (287)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC-SHHHHHHHH
T ss_pred             EEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCC-CHHHHHHHH
Confidence            99999984                46778999999999998 7999999999998877899999987764 5555     


Q ss_pred             HHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEE
Q 015746          214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  293 (401)
Q Consensus       214 ~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~  293 (401)
                      +|+++.+++.+++++||+++||++.. .++..++..+..++++.++++  +.++|+|++|+|++++.+++++.   +++|
T Consensus       137 ~E~~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~---~~~~  210 (287)
T 3sc6_A          137 GEQFVKELHNKYFIVRTSWLYGKYGN-NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL---YGTY  210 (287)
T ss_dssp             HHHHHHHHCSSEEEEEECSEECSSSC-CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC---CEEE
T ss_pred             HHHHHHHhCCCcEEEeeeeecCCCCC-cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC---CCeE
Confidence            55556666889999999999999754 467777888888888888765  78999999999999999999877   3799


Q ss_pred             EecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHH
Q 015746          294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  373 (401)
Q Consensus       294 ~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~  373 (401)
                      |+++++.+++.|+++.+.+.+|.+.++..++......     .........+|++|++ +|||.|.++++|+|+++++|+
T Consensus       211 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~  284 (287)
T 3sc6_A          211 HVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGA-----AAARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIET  284 (287)
T ss_dssp             ECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCC-----SSCCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHT
T ss_pred             EEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCc-----ccCCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHH
Confidence            9999999999999999999999998887665321110     1122355678999999 799999999999999999998


Q ss_pred             HH
Q 015746          374 VK  375 (401)
Q Consensus       374 ~~  375 (401)
                      ++
T Consensus       285 ~~  286 (287)
T 3sc6_A          285 KS  286 (287)
T ss_dssp             C-
T ss_pred             hc
Confidence            64

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1e-37  Score=292.76  Aligned_cols=259  Identities=15%  Similarity=0.169  Sum_probs=212.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    | +||||++|+++|+++||+|++++|+.++..               .+++++.+|   .+.+.++++
T Consensus         2 ~~~~ilVt----G-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~~~~~Dl~d~~~~~~~~~   61 (286)
T 3gpi_A            2 SLSKILIA----G-CGDLGLELARRLTAQGHEVTGLRRSAQPMP---------------AGVQTLIADVTRPDTLASIVH   61 (286)
T ss_dssp             CCCCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC---------------TTCCEEECCTTCGGGCTTGGG
T ss_pred             CCCcEEEE----C-CCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cCCceEEccCCChHHHHHhhc
Confidence            46899999    9 599999999999999999999999875421               367788887   566777776


Q ss_pred             CCcccEEEeCCC-----------CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH-----
Q 015746          150 GVTFDVVLDNNG-----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ-----  213 (401)
Q Consensus       150 ~~~~d~Vv~~a~-----------~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~-----  213 (401)
                      + ++|+|||+|+           .|+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+     
T Consensus        62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~  139 (286)
T 3gpi_A           62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK-DFSGKRMLE  139 (286)
T ss_dssp             G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC-SHHHHHHHH
T ss_pred             C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC-ChhhHHHHH
Confidence            5 3799999997           37899999999999999999999999999998877788998887764 4554     


Q ss_pred             HHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCC-cCCCcE
Q 015746          214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNI  292 (401)
Q Consensus       214 ~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~g~~  292 (401)
                      +|++ .++ ++++++||+++||++..     .++..+.. +  ..++++++.++|+|++|+|++++.+++++. ...+++
T Consensus       140 ~E~~-~~~-~~~~ilR~~~v~G~~~~-----~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~  209 (286)
T 3gpi_A          140 AEAL-LAA-YSSTILRFSGIYGPGRL-----RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERL  209 (286)
T ss_dssp             HHHH-GGG-SSEEEEEECEEEBTTBC-----HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSE
T ss_pred             HHHH-Hhc-CCeEEEecccccCCCch-----hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCce
Confidence            5555 555 89999999999999764     34556555 3  345778899999999999999999999852 122589


Q ss_pred             EEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC-CHHHHHHHHHH
Q 015746          293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFE  371 (401)
Q Consensus       293 ~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~-~l~e~l~~~~~  371 (401)
                      ||+++++.+++.|+++.+.+.+|.+.++...+    .         ......+|++|++ +|||+|++ +++|+|+++++
T Consensus       210 ~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----~---------~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~  275 (286)
T 3gpi_A          210 YIVTDNQPLPVHDLLRWLADRQGIAYPAGATP----P---------VQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLA  275 (286)
T ss_dssp             EEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC----C---------BCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc----c---------cCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHH
Confidence            99999999999999999999999887654322    1         1256778999998 89999998 79999999999


Q ss_pred             HHHHhc
Q 015746          372 EYVKIG  377 (401)
Q Consensus       372 ~~~~~~  377 (401)
                      |+....
T Consensus       276 ~~~~~~  281 (286)
T 3gpi_A          276 AMREGH  281 (286)
T ss_dssp             HHTC--
T ss_pred             HHhccc
Confidence            998653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=6e-37  Score=294.44  Aligned_cols=280  Identities=15%  Similarity=0.172  Sum_probs=216.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+||||++++++|+++||+|++++|+..+...           +...+++++.+|   .+++.++++
T Consensus        12 ~~M~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------l~~~~~~~~~~Dl~d~~~~~~~~~   76 (342)
T 2x4g_A           12 AHVKYAVL----GATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-----------LAYLEPECRVAEMLDHAGLERALR   76 (342)
T ss_dssp             CCCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-----------GGGGCCEEEECCTTCHHHHHHHTT
T ss_pred             cCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-----------hccCCeEEEEecCCCHHHHHHHHc
Confidence            35799999    999999999999999999999999998754322           222367888888   677888887


Q ss_pred             CCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCC--CCCCCCCCCCCC---CC
Q 015746          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE--PPHVEGDVVKPD---AG  210 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~--~~~~E~~~~~~~---~~  210 (401)
                      +  +|+|||+|+.              |+.++.+++++|++.++++|||+||.++|+....  .+ +|+++..+.   .+
T Consensus        77 ~--~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~  153 (342)
T 2x4g_A           77 G--LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKS  153 (342)
T ss_dssp             T--CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSC
T ss_pred             C--CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccC
Confidence            6  5999999983              4778999999999999999999999999987544  34 777776651   35


Q ss_pred             hHHHHH-----HHHHh---CCCeEEEecCeeecCCC-CCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHH
Q 015746          211 HVQVEK-----YISEN---FSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA  281 (401)
Q Consensus       211 ~~~~ek-----~~~e~---g~~~~ilRp~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~  281 (401)
                      .|+..|     ++.++   +++++++||+++||++. ... +..++..+..+.+..+   +++.++|+|++|+|++++.+
T Consensus       154 ~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~  229 (342)
T 2x4g_A          154 SYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMA  229 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHH
Confidence            555444     44432   89999999999999976 423 5567777777776655   45779999999999999999


Q ss_pred             hcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccccc-----------c------cccCCCccceEe
Q 015746          282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID-----------A------KKAFPFRNMHFY  344 (401)
Q Consensus       282 ~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~-----------~------~~~~~~~~~~~~  344 (401)
                      ++++..  |++||+++++ +++.|+++.+.+.+|.+.++ .++.......           .      ............
T Consensus       230 ~~~~~~--g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (342)
T 2x4g_A          230 LERGRI--GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQF  305 (342)
T ss_dssp             HHHSCT--TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCC
T ss_pred             HhCCCC--CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcc
Confidence            987765  5899999999 99999999999999998776 5554311000           0      000111124677


Q ss_pred             echHHHHHhcCC-CCCCCHHHHHHHHHHHHHHhcCC
Q 015746          345 AEPRAAKDILGW-RSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       345 ~~~~k~~~~lG~-~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      +|++|++++||| +| ++++|+|+++++||++++..
T Consensus       306 ~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~  340 (342)
T 2x4g_A          306 LDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYF  340 (342)
T ss_dssp             BCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCC
T ss_pred             cChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCC
Confidence            899999999999 99 89999999999999988653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.3e-36  Score=298.37  Aligned_cols=289  Identities=19%  Similarity=0.248  Sum_probs=218.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHH-hCCCeEEEEecCCCCcccCCCCC-CCcc----cchh----cCC---CeEEEcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPP-FNRF----NEIV----SAG---GKTVWGD  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~g~~V~~~~r~~~~~~~~~~~~-~~~~----~~l~----~~~---~~~~~~D  140 (401)
                      +|+||||    ||+||||++++++|+ ++||+|++++|............ ...+    ..+.    ..+   ++++.+|
T Consensus         2 ~m~vlVT----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (397)
T 1gy8_A            2 HMRVLVC----GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (397)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECC
Confidence            4799999    999999999999999 99999999999764320000000 0000    0000    114   7888888


Q ss_pred             ---HhhHHHhhcCCc-ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC-----
Q 015746          141 ---PAEVGNVVGGVT-FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-----  195 (401)
Q Consensus       141 ---~~~~~~~~~~~~-~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~-----  195 (401)
                         ++.+.++++..+ +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+...     
T Consensus        78 l~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~  157 (397)
T 1gy8_A           78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (397)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             CCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccc
Confidence               667778887434 7999999984                467899999999999999999999999998765     


Q ss_pred             --CCCCCCCCCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCC----------CCcHHHHH----HHH
Q 015746          196 --EPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNN----------KDCEEWFF----DRI  250 (401)
Q Consensus       196 --~~~~~E~~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~----------~~~~~~~~----~~~  250 (401)
                        ..+++|+++..+. +.|+..|...|         ++++++++||++|||++..          ..++..++    .++
T Consensus       158 ~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  236 (397)
T 1gy8_A          158 TNAEPIDINAKKSPE-SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (397)
T ss_dssp             -CCCCBCTTSCCBCS-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             ccccCcCccCCCCCC-CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHH
Confidence              5688888876553 56665554333         3899999999999999632          23444443    244


Q ss_pred             HcCC------------CcccCC------CCcceeeeeeHHHHHHHHHHHhcCCCcCC----C---cEEEecCCCCCCHHH
Q 015746          251 VRKR------------PVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPEAAS----S---NIFNLVSDRAVTLDG  305 (401)
Q Consensus       251 ~~~~------------~~~~~~------~~~~~~~~v~v~D~a~~~~~~~~~~~~~~----g---~~~~~~~~~~~t~~e  305 (401)
                      ..+.            ++.++|      ++++.++|+|++|+|++++.+++++...+    +   ++||+++++.+++.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  316 (397)
T 1gy8_A          237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (397)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             HhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHH
Confidence            4443            466666      67889999999999999999997643221    3   799999999999999


Q ss_pred             HHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC-CHHHHHHHHHHHHHHhc
Q 015746          306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFEEYVKIG  377 (401)
Q Consensus       306 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~-~l~e~l~~~~~~~~~~~  377 (401)
                      +++.+.+.+|.+.++...+....          ......+|++|++++|||+|.+ +++|+|+++++||+++.
T Consensus       317 ~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~  379 (397)
T 1gy8_A          317 VIEVARKTTGHPIPVRECGRREG----------DPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHP  379 (397)
T ss_dssp             HHHHHHHHHCCCCCEEEECCCTT----------CCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHhCCCCCeeeCCCCCC----------cccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhcc
Confidence            99999999998877655543221          1246778999999999999998 99999999999998763

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2.3e-36  Score=290.98  Aligned_cols=276  Identities=21%  Similarity=0.229  Sum_probs=217.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .++|+||||    ||+||||++++++|+++|++|++++|.......       .+..+ ...+++++.+|..+  ..+.+
T Consensus        25 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~D~~~--~~~~~   91 (343)
T 2b69_A           25 KDRKRILIT----GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR-------NVEHWIGHENFELINHDVVE--PLYIE   91 (343)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------GTGGGTTCTTEEEEECCTTS--CCCCC
T ss_pred             cCCCEEEEE----cCccHHHHHHHHHHHHCCCEEEEEeCCCccchh-------hhhhhccCCceEEEeCccCC--hhhcC
Confidence            457899999    999999999999999999999999997643211       01111 12467788888432  23443


Q ss_pred             CcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC-----CCCCCC
Q 015746          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDA  209 (401)
Q Consensus       151 ~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~-----~~~~~~  209 (401)
                        +|+|||+|+.                |+.++.+++++|++.++ +|||+||.++|+.....+++|+.     +..+ .
T Consensus        92 --~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~  167 (343)
T 2b69_A           92 --VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP-R  167 (343)
T ss_dssp             --CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST-T
T ss_pred             --CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCC-C
Confidence              6999999984                46778999999999987 89999999999987666777774     2222 2


Q ss_pred             ChHH-----HHHHHH----HhCCCeEEEecCeeecCCCC---CCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          210 GHVQ-----VEKYIS----ENFSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       210 ~~~~-----~ek~~~----e~g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      +.|+     +|+++.    +.+++++++||+++||++..   ...+..++..+..++++.+++++.+.++|+|++|+|++
T Consensus       168 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a  247 (343)
T 2b69_A          168 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG  247 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHH
Confidence            3454     444443    34899999999999999754   34667778888889988888999999999999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCC
Q 015746          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  357 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  357 (401)
                      ++.+++.+.   +++||+++++.+++.|+++.+.+.+|.+.++...+.....          .....+|++|++++|||+
T Consensus       248 ~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~----------~~~~~~d~~k~~~~lG~~  314 (343)
T 2b69_A          248 LVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD----------PQKRKPDIKKAKLMLGWE  314 (343)
T ss_dssp             HHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTC----------CCCCCBCCHHHHHHHCCC
T ss_pred             HHHHHhcCC---CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCC----------CceecCCHHHHHHHcCCC
Confidence            999998653   4799999999999999999999999998777666543221          134567899999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhc
Q 015746          358 STTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~~~  377 (401)
                      |.++++|+|+++++||+++.
T Consensus       315 p~~~l~e~l~~~~~~~~~~~  334 (343)
T 2b69_A          315 PVVPLEEGLNKAIHYFRKEL  334 (343)
T ss_dssp             CCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999998763

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=2.1e-37  Score=290.51  Aligned_cols=268  Identities=17%  Similarity=0.211  Sum_probs=211.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .+||+||||    || ||||++++++|+++||+|++++|+..+..           .+...+++++.+|..+++  +.+ 
T Consensus         3 ~m~~~ilVt----Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~D~~d~~--~~~-   63 (286)
T 3ius_A            3 AMTGTLLSF----GH-GYTARVLSRALAPQGWRIIGTSRNPDQME-----------AIRASGAEPLLWPGEEPS--LDG-   63 (286)
T ss_dssp             --CCEEEEE----TC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-----------HHHHTTEEEEESSSSCCC--CTT-
T ss_pred             CCcCcEEEE----CC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-----------hHhhCCCeEEEecccccc--cCC-
Confidence            356899999    98 99999999999999999999999875432           233357899999976655  444 


Q ss_pred             cccEEEeCCCCC---hhhHHHHHHHHHh--CCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH-----HHHHHHHh
Q 015746          152 TFDVVLDNNGKN---LDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ-----VEKYISEN  221 (401)
Q Consensus       152 ~~d~Vv~~a~~~---~~~~~~ll~aa~~--~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~-----~ek~~~e~  221 (401)
                       +|+|||+|+..   ...+.+++++|++  .++++|||+||.++|+.....+++|+++..+. +.|+     +|+++.+.
T Consensus        64 -~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~  141 (286)
T 3ius_A           64 -VTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT-AARGRWRVMAEQQWQAV  141 (286)
T ss_dssp             -CCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC-SHHHHHHHHHHHHHHHS
T ss_pred             -CCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC-CHHHHHHHHHHHHHHhh
Confidence             69999999863   3457899999999  68899999999999998877788999887765 4555     55666666


Q ss_pred             -CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          222 -FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       222 -g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                       +++++++||+++||++...      +..+..+.+..+.++ .+.++|+|++|+|++++.+++++..  |++||+++++.
T Consensus       142 ~~~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~i~~~~~  212 (286)
T 3ius_A          142 PNLPLHVFRLAGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDP--GAVYNVCDDEP  212 (286)
T ss_dssp             TTCCEEEEEECEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCT--TCEEEECCSCC
T ss_pred             cCCCEEEEeccceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCC--CCEEEEeCCCC
Confidence             9999999999999997543      345566777767665 5789999999999999999999884  58999999999


Q ss_pred             CCHHHHHHHHHHHhCCCceEE-ecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC-CHHHHHHHHHHH
Q 015746          301 VTLDGMAKLCAQAAGLPVEIV-HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFEE  372 (401)
Q Consensus       301 ~t~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~-~l~e~l~~~~~~  372 (401)
                      +++.|+++.+.+.+|.+.+.. ..........   ...+......+|++|++++|||+|++ +++|+|+++++.
T Consensus       213 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~  283 (286)
T 3ius_A          213 VPPQDVIAYAAELQGLPLPPAVDFDKADLTPM---ARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD  283 (286)
T ss_dssp             BCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHH---HHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHcCCCCCcccchhhhccChh---HHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence            999999999999999875532 2211111100   00111256678999999999999998 799999998864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.9e-36  Score=290.56  Aligned_cols=277  Identities=19%  Similarity=0.226  Sum_probs=214.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..||+||||    ||+||||++++++|+++|++|++++|.......       .+..+  .+++++.+|   .+++.+++
T Consensus        19 ~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~l~~~--~~~~~~~~Dl~d~~~~~~~~   85 (333)
T 2q1w_A           19 SHMKKVFIT----GICGQIGSHIAELLLERGDKVVGIDNFATGRRE-------HLKDH--PNLTFVEGSIADHALVNQLI   85 (333)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------GSCCC--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEECCCccchh-------hHhhc--CCceEEEEeCCCHHHHHHHH
Confidence            457899999    999999999999999999999999997643211       11111  367778887   66777888


Q ss_pred             cCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEeccccccc----CCCCCCCCCCCCCCCCCCh
Q 015746          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYK----PADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~----~~~~~~~~E~~~~~~~~~~  211 (401)
                      ++.++|+|||+|+.             |+.++.+++++|++.++++|||+||.++|+    .... +++|++  .+..+.
T Consensus        86 ~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~  162 (333)
T 2q1w_A           86 GDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSS  162 (333)
T ss_dssp             HHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCH
T ss_pred             hccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCc
Confidence            76446999999984             457789999999999999999999999998    5444 777776  222144


Q ss_pred             HH-----HHHHHHH-hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC
Q 015746          212 VQ-----VEKYISE-NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (401)
Q Consensus       212 ~~-----~ek~~~e-~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~  285 (401)
                      |+     +|+++.. .. +++++||+++||++....++..++..+..+.  .+++ +.+.++|+|++|+|++++.+++++
T Consensus       163 Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~  238 (333)
T 2q1w_A          163 YAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGV  238 (333)
T ss_dssp             HHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcC
Confidence            55     5555555 44 8999999999999854456777777777766  4556 677899999999999999999876


Q ss_pred             CcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHH
Q 015746          286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED  365 (401)
Q Consensus       286 ~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~  365 (401)
                      .   |++||+++++.+++.|+++.+.+.+|.+ .+...+... .     ..........+|++|+++. ||+|.++++|+
T Consensus       239 ~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-~-----~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~  307 (333)
T 2q1w_A          239 G---HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRE-L-----GPDDAPSILLDPSRTIQDF-GKIEFTPLKET  307 (333)
T ss_dssp             C---CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEE-C-----CTTSCCCCCBCCHHHHHHH-CCCCCCCHHHH
T ss_pred             C---CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCC-c-----ccccccccccCCHHHHHhc-CCCcCCCHHHH
Confidence            6   5899999999999999999999999987 433222211 0     0111225677899999987 99999999999


Q ss_pred             HHHHHHHHHHhcCC
Q 015746          366 LKERFEEYVKIGRD  379 (401)
Q Consensus       366 l~~~~~~~~~~~~~  379 (401)
                      |+++++||++++..
T Consensus       308 l~~~~~~~~~~~~~  321 (333)
T 2q1w_A          308 VAAAVAYFREYGVS  321 (333)
T ss_dssp             HHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHCCC
Confidence            99999999988754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-36  Score=292.89  Aligned_cols=292  Identities=16%  Similarity=0.143  Sum_probs=222.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-------hcCCCeEEEcC---Hhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-------VSAGGKTVWGD---PAE  143 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-------~~~~~~~~~~D---~~~  143 (401)
                      +|+||||    ||+||||++++++|+++|++|++++|+.......      .+..+       ...+++++.+|   .++
T Consensus        24 ~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~   93 (375)
T 1t2a_A           24 RNVALIT----GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTG------RIEHLYKNPQAHIEGNMKLHYGDLTDSTC   93 (375)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCT------TTGGGC---------CEEEEECCTTCHHH
T ss_pred             CcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCccccchh------hHHHHhhhhccccCCCceEEEccCCCHHH
Confidence            4789999    9999999999999999999999999987542110      11111       12467788887   677


Q ss_pred             HHHhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC---CEEEEecccccccCCCCCCCCCCCC
Q 015746          144 VGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv---~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      +.+++++.++|+|||+|+.                |+.++.+++++|++.++   ++|||+||.++|+.....+++|+++
T Consensus        94 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~  173 (375)
T 1t2a_A           94 LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTP  173 (375)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             HHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCC
Confidence            7888876668999999984                46788999999999988   7999999999999876678888887


Q ss_pred             CCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcH----HHHHHHHHcCCC-cccCCCCcceeeeee
Q 015746          205 VKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRP-VPIPGSGMQFTNIAH  270 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~v~  270 (401)
                      ..+. +.|+..|...|         ++++++++|++++|||+....+.    ..++..+..+.. ...++++++.++|+|
T Consensus       174 ~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  252 (375)
T 1t2a_A          174 FYPR-SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  252 (375)
T ss_dssp             CCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             CCCC-ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence            6654 56665554433         38999999999999997654433    344555666653 345788889999999


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEe--cCCCcc---------cccccccCCCc
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--YDPKAA---------GIDAKKAFPFR  339 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~--~~~~~~---------~~~~~~~~~~~  339 (401)
                      ++|+|++++.+++++..   ++||+++++.+|+.|+++.+.+.+|.+.++..  +|....         ........+..
T Consensus       253 v~Dva~a~~~~~~~~~~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  329 (375)
T 1t2a_A          253 AKDYVEAMWLMLQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTE  329 (375)
T ss_dssp             HHHHHHHHHHHHHSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSC
T ss_pred             HHHHHHHHHHHHhcCCC---ceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCccc
Confidence            99999999999987652   79999999999999999999999998865421  111100         00000011222


Q ss_pred             cceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          340 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       340 ~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      .....+|++|++++|||+|+++++|+|+++++||++..+.
T Consensus       330 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  369 (375)
T 1t2a_A          330 VDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRT  369 (375)
T ss_dssp             CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred             chhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhhcc
Confidence            3456689999999999999999999999999999987543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-36  Score=294.50  Aligned_cols=300  Identities=16%  Similarity=0.178  Sum_probs=219.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc--ccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ||+||||    ||+||||++++++|+++|++|++++|+....  ..+.... ... .....+++++.+|   .+++.+++
T Consensus         1 m~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            1 SKVALIT----GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIY-QDP-HTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHh-hcc-ccCCCceEEEECCCCCHHHHHHHH
Confidence            5799999    9999999999999999999999999976532  1111000 000 0012356667776   67788888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC---CEEEEecccccccCCCCCCCCCCCCCCCCC
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv---~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~  209 (401)
                      ++.++|+|||+|+.                |+.++.+++++|++.++   ++|||+||.++|+.....+++|+++..+. 
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~-  153 (372)
T 1db3_A           75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-  153 (372)
T ss_dssp             HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC-
T ss_pred             HhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCC-
Confidence            76567999999984                45689999999999988   79999999999998766688888876654 


Q ss_pred             ChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCc----HHHHHHHHHcCCC-cccCCCCcceeeeeeHHHHH
Q 015746          210 GHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       210 ~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a  275 (401)
                      +.|+..|...|         +++.++++|+.++|||+....+    +..++..+..+.. ...++++++.++|+|++|+|
T Consensus       154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva  233 (372)
T 1db3_A          154 SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV  233 (372)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHH
Confidence            66666554433         3899999999999999765443    3345556666654 44568888999999999999


Q ss_pred             HHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEe--cCCC---------c----------ccccccc
Q 015746          276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--YDPK---------A----------AGIDAKK  334 (401)
Q Consensus       276 ~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~--~~~~---------~----------~~~~~~~  334 (401)
                      ++++.+++++.   +++||+++++.+++.|+++.+.+.+|.+.++..  ++..         .          .......
T Consensus       234 ~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (372)
T 1db3_A          234 KMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRY  310 (372)
T ss_dssp             HHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGG
T ss_pred             HHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccc
Confidence            99999998765   379999999999999999999999998665331  1110         0          0000000


Q ss_pred             cCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccC
Q 015746          335 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM  383 (401)
Q Consensus       335 ~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~  383 (401)
                      ..+.....+.+|++|++++|||+|+++++|+|+++++||++..+.....
T Consensus       311 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~  359 (372)
T 1db3_A          311 FRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLL  359 (372)
T ss_dssp             CCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC--
T ss_pred             cCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhccchh
Confidence            1222234566899999999999999999999999999999886554443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=4.6e-36  Score=287.45  Aligned_cols=279  Identities=16%  Similarity=0.198  Sum_probs=216.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ...+|+||||    ||+||||++++++|+++||+|++++|.........       ..+  .+++++.+|   .+++.++
T Consensus        17 ~~~~~~vlVT----GasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~l--~~v~~~~~Dl~d~~~~~~~   83 (330)
T 2pzm_A           17 RGSHMRILIT----GGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL-------PPV--AGLSVIEGSVTDAGLLERA   83 (330)
T ss_dssp             TTTCCEEEEE----TTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-------CSC--TTEEEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh-------hcc--CCceEEEeeCCCHHHHHHH
Confidence            4456899999    99999999999999999999999999764432111       111  367778887   6677888


Q ss_pred             hcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCC--CCCCCCCCCCCCChH
Q 015746          148 VGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGHV  212 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~--~~~E~~~~~~~~~~~  212 (401)
                      ++..++|+|||+|+.             |+.++.+++++|++.++++|||+||.++|+.....  +++|++  .+ .+.|
T Consensus        84 ~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~-~~~Y  160 (330)
T 2pzm_A           84 FDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--AP-FTSY  160 (330)
T ss_dssp             HHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CC-CSHH
T ss_pred             HhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CC-CChH
Confidence            873236999999984             46778999999999999999999999999876444  777776  22 2455


Q ss_pred             HH-----HHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHH-HHHHHhcCCC
Q 015746          213 QV-----EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS-MLTLAVENPE  286 (401)
Q Consensus       213 ~~-----ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~-~~~~~~~~~~  286 (401)
                      +.     |.++...++++++|||+++|||+....++..++..+..+.  .+++++. .++++|++|+|+ +++.+++++.
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~  237 (330)
T 2pzm_A          161 GISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP  237 (330)
T ss_dssp             HHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC
Confidence            54     4455555899999999999999874456666777777765  5566666 899999999999 9999998754


Q ss_pred             cCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHH-----HHhcCCCCCCC
Q 015746          287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA-----KDILGWRSTTN  361 (401)
Q Consensus       287 ~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~lG~~p~~~  361 (401)
                         |++||+++++.+++.|+++.+.+.+|.+ ++...+...           ......+|++|+     ++ |||+|.++
T Consensus       238 ---g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-----------~~~~~~~d~~k~~~~~l~~-lG~~p~~~  301 (330)
T 2pzm_A          238 ---TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA-----------PGADDVPSVVLDPSKTETE-FGWKAKVD  301 (330)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC-----------CCTTSCSEECBCCHHHHHH-HCCCCCCC
T ss_pred             ---CCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc-----------chhhccCCHHHHhhchHHH-cCCcccCC
Confidence               5899999999999999999999999987 433322211           113445666666     77 99999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCccCC
Q 015746          362 LPEDLKERFEEYVKIGRDKKAMQ  384 (401)
Q Consensus       362 l~e~l~~~~~~~~~~~~~~~~~~  384 (401)
                      ++|+|+++++||++.+......+
T Consensus       302 ~~~~l~~~~~~~~~~~~~~~~~~  324 (330)
T 2pzm_A          302 FKDTITGQLAWYDKYGVTDIFSH  324 (330)
T ss_dssp             HHHHHHHHHHHHHHHCSCSCCCS
T ss_pred             HHHHHHHHHHHHHhhCcccccCc
Confidence            99999999999999876544333

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=4.2e-36  Score=290.80  Aligned_cols=286  Identities=16%  Similarity=0.171  Sum_probs=217.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCC--CcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      |+||||    ||+||||++++++|+++ |++|++++|...  ....+..     +.  ...+++++.+|   .+++.+++
T Consensus         1 MkvlVT----GasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-----~~--~~~~~~~~~~Dl~d~~~~~~~~   69 (361)
T 1kew_A            1 MKILIT----GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD-----IS--ESNRYNFEHADICDSAEITRIF   69 (361)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT-----TT--TCTTEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEE----CCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh-----hh--cCCCeEEEECCCCCHHHHHHHH
Confidence            589999    99999999999999998 799999998752  2221110     00  12367788888   66777888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhC--CCC-------EEEEecccccccCCCC--C----
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS--GVK-------QFLFISSAGIYKPADE--P----  197 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~--gv~-------~~v~~SS~~vy~~~~~--~----  197 (401)
                      +..++|+|||+|+.                |+.++.+++++|++.  +++       +|||+||.++|+....  .    
T Consensus        70 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           70 EQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             hhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            63346999999984                467899999999998  887       9999999999986532  1    


Q ss_pred             ----CCCCCCCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCc
Q 015746          198 ----PHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       198 ----~~~E~~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                          +++|+++..+. +.|+..|...|         .+++++++||++|||+.... .++..++..+..++++.+++++.
T Consensus       150 ~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (361)
T 1kew_A          150 VTLPLFTETTAYAPS-SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             SCCCCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             ccCCCCCCCCCCCCC-CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCc
Confidence                67787766543 56665554333         38999999999999998643 35667778888888888889999


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceE
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF  343 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (401)
                      +.++|+|++|+|++++.+++++..  |++||+++++.+++.|+++.+.+.+|.+.+... + ...........+.....+
T Consensus       229 ~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p-~~~~~~~~~~~~~~~~~~  304 (361)
T 1kew_A          229 QIRDWLYVEDHARALHMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-S-YREQITYVADRPGHDRRY  304 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-C-GGGGEEEECCCTTCCCBC
T ss_pred             eeEeeEEHHHHHHHHHHHHhCCCC--CCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-c-cccceeecCCCCccccee
Confidence            999999999999999999987543  689999999999999999999999986532110 0 000000000011112456


Q ss_pred             eechHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       344 ~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      .+|++|++++|||+|+++++|+|+++++||+++
T Consensus       305 ~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          305 AIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             CBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             ecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence            789999999999999999999999999999876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-36  Score=284.39  Aligned_cols=259  Identities=17%  Similarity=0.160  Sum_probs=211.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .|+||||    |||||||++++++|+++||+|++++|..-                   ++    .|.+++.+++++.++
T Consensus        12 ~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------------Dl----~d~~~~~~~~~~~~~   64 (292)
T 1vl0_A           12 HMKILIT----GANGQLGREIQKQLKGKNVEVIPTDVQDL-------------------DI----TNVLAVNKFFNEKKP   64 (292)
T ss_dssp             CEEEEEE----STTSHHHHHHHHHHTTSSEEEEEECTTTC-------------------CT----TCHHHHHHHHHHHCC
T ss_pred             cceEEEE----CCCChHHHHHHHHHHhCCCeEEeccCccC-------------------CC----CCHHHHHHHHHhcCC
Confidence            5799999    99999999999999999999999998631                   11    267888888874346


Q ss_pred             cEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH----
Q 015746          154 DVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ----  213 (401)
Q Consensus       154 d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~----  213 (401)
                      |+|||+|+.                |+.++.+++++|++.++ +|||+||.++|+.....+++|+++..+. +.|+    
T Consensus        65 d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~-~~Y~~sK~  142 (292)
T 1vl0_A           65 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ-SAYGKTKL  142 (292)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC-SHHHHHHH
T ss_pred             CEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCc-cHHHHHHH
Confidence            999999984                45678999999999998 9999999999998766788888877654 5555    


Q ss_pred             -HHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcE
Q 015746          214 -VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (401)
Q Consensus       214 -~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~  292 (401)
                       +|+++.+.+.+++++||+++||+ . ..++..++..+..+.++.++++  +.++|+|++|+|++++.+++++   .+++
T Consensus       143 ~~E~~~~~~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~---~~~~  215 (292)
T 1vl0_A          143 EGENFVKALNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVVLKVIDEK---NYGT  215 (292)
T ss_dssp             HHHHHHHHHCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHHHHHHHHT---CCEE
T ss_pred             HHHHHHHhhCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeecC--eeeCCccHHHHHHHHHHHHhcC---CCcE
Confidence             45555556889999999999999 3 3466677777777877777664  6789999999999999999876   2589


Q ss_pred             EEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHH
Q 015746          293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  372 (401)
Q Consensus       293 ~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~  372 (401)
                      ||+++++.+++.|+++.+.+.+|.+.++..++......     .........+|++|++++|||+|+ +++|+|+++++|
T Consensus       216 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~  289 (292)
T 1vl0_A          216 FHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPR-----PAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDL  289 (292)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCC-----SSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHH
T ss_pred             EEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCc-----ccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHH
Confidence            99999999999999999999999987776655432211     011224677899999999999998 999999999999


Q ss_pred             HH
Q 015746          373 YV  374 (401)
Q Consensus       373 ~~  374 (401)
                      |+
T Consensus       290 ~~  291 (292)
T 1vl0_A          290 LQ  291 (292)
T ss_dssp             HT
T ss_pred             hc
Confidence            86

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=7.1e-36  Score=293.57  Aligned_cols=288  Identities=17%  Similarity=0.171  Sum_probs=218.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc-------cCCCCC-----CCcccchhcCCCeEEEcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-------KMKKPP-----FNRFNEIVSAGGKTVWGD  140 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~-------~~~~~~-----~~~~~~l~~~~~~~~~~D  140 (401)
                      .+++||||    ||+||||++++++|+++||+|++++|......       .+....     ...+..+...+++++.+|
T Consensus        10 ~~~~vlVT----G~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A           10 HGSRVMVI----GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             --CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             CCCeEEEe----CCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            47899999    99999999999999999999999988542210       000000     000001123478888888


Q ss_pred             ---HhhHHHhhcCCcccEEEeCCCC-------------------ChhhHHHHHHHHHhCCC-CEEEEecccccccCCCCC
Q 015746          141 ---PAEVGNVVGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEP  197 (401)
Q Consensus       141 ---~~~~~~~~~~~~~d~Vv~~a~~-------------------~~~~~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~~~  197 (401)
                         .+++.+++++.++|+|||+|+.                   |+.++.+++++|++.++ ++|||+||.++|+... .
T Consensus        86 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~  164 (404)
T 1i24_A           86 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-I  164 (404)
T ss_dssp             TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-S
T ss_pred             CCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-C
Confidence               6677788877457999999983                   46778999999999887 5999999999998764 4


Q ss_pred             CCCCC--------------CCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCC---------------
Q 015746          198 PHVEG--------------DVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNN---------------  239 (401)
Q Consensus       198 ~~~E~--------------~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~---------------  239 (401)
                      ++.|+              .+..+ .+.|+..|+..|         .+++++++||++||||+..               
T Consensus       165 ~~~E~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          165 DIEEGYITITHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCC-CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             CCCccccccccccccccccCCCCC-CChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence            56665              22222 356665554432         3899999999999999763               


Q ss_pred             ---CCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCC--cEEEecCCCCCCHHHHHHHHHHH-
Q 015746          240 ---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQA-  313 (401)
Q Consensus       240 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g--~~~~~~~~~~~t~~el~~~i~~~-  313 (401)
                         ...+..++..+..++++.+++++.+.++|+|++|+|++++.+++++... |  ++||+++ +.+++.|+++.+.+. 
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~-g~~~~yni~~-~~~s~~e~~~~i~~~~  321 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKA-GEFRVFNQFT-EQFSVNELASLVTKAG  321 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCT-TCEEEEEECS-EEEEHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccC-CCceEEEECC-CCCcHHHHHHHHHHHH
Confidence               2457778888899998888899999999999999999999999876532 3  6999998 889999999999998 


Q ss_pred             --hCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          314 --AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       314 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                        +|.+.++...+......        ....+.+|++|++ +|||+|.++++++++++++||+...
T Consensus       322 ~~~g~~~~~~~~p~~~~~~--------~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~  378 (404)
T 1i24_A          322 SKLGLDVKKMTVPNPRVEA--------EEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFK  378 (404)
T ss_dssp             HTTTCCCCEEEECCSSCSC--------SSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred             HhhCCCccccccCcccCcc--------ccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhh
Confidence              78887766555432210        1134567889998 6999999999999999999998664

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.3e-35  Score=287.28  Aligned_cols=276  Identities=15%  Similarity=0.196  Sum_probs=214.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .+|+||||    ||+||||++|+++|+++| ++|++++|...... ..     .+..+   .+.....|.+.+..++++.
T Consensus        45 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-----~~~~~---~~~~d~~~~~~~~~~~~~~  111 (357)
T 2x6t_A           45 EGRMIIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-----NLVDL---NIADYMDKEDFLIQIMAGE  111 (357)
T ss_dssp             ---CEEEE----TTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-----GTTTS---CCSEEEEHHHHHHHHHTTC
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-----cccCc---eEeeecCcHHHHHHHHhhc
Confidence            45899999    999999999999999999 99999999764321 00     01111   1334444577888888752


Q ss_pred             ---cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHH
Q 015746          152 ---TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (401)
Q Consensus       152 ---~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~  214 (401)
                         ++|+|||+|+.              |+.++.+++++|++.++ +|||+||.++|+.....+++|+++..+. +.|+.
T Consensus       112 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~-~~Y~~  189 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL-NVFGY  189 (357)
T ss_dssp             CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS-SHHHH
T ss_pred             ccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCC-ChhHH
Confidence               47999999983              67789999999999999 9999999999998766688888876654 55665


Q ss_pred             HHHHHH-----h----CCCeEEEecCeeecCCCC-----CCcHHHHHHHHHcCCCcccCCCCcc-eeeeeeHHHHHHHHH
Q 015746          215 EKYISE-----N----FSNWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLT  279 (401)
Q Consensus       215 ek~~~e-----~----g~~~~ilRp~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~D~a~~~~  279 (401)
                      .|...|     +    ++++++|||++|||++..     ...+..++..+..++++.+++++.+ .++|+|++|+|++++
T Consensus       190 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~  269 (357)
T 2x6t_A          190 SKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNL  269 (357)
T ss_dssp             HHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHH
Confidence            554433     2    789999999999999765     2466777888888888888888888 999999999999999


Q ss_pred             HHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCC-ceEEecCCCcccccccccCCCccceEeechHHHHHhcCC-C
Q 015746          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW-R  357 (401)
Q Consensus       280 ~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~-~  357 (401)
                      .+++++.   +++||+++++.+++.|+++.+.+.+|.+ +.....+....        ........+|++|+++ ||| .
T Consensus       270 ~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~-lG~~~  337 (357)
T 2x6t_A          270 WFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRA-AGYDK  337 (357)
T ss_dssp             HHHHHCC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGT--------TSCCSBCCCCCHHHHH-TTCCC
T ss_pred             HHHhcCC---CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccc--------cccccccccCHHHHHH-cCCCC
Confidence            9998766   4899999999999999999999999987 44433322100        1112345678899986 999 7


Q ss_pred             CCCCHHHHHHHHHHHHHH
Q 015746          358 STTNLPEDLKERFEEYVK  375 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~  375 (401)
                      |.++++|+|+++++||++
T Consensus       338 ~~~~l~e~l~~~~~~~~~  355 (357)
T 2x6t_A          338 PFKTVAEGVTEYMAWLNR  355 (357)
T ss_dssp             CCCCHHHHHHHHHHHHC-
T ss_pred             CCCCHHHHHHHHHHHHhh
Confidence            888999999999999975

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1e-36  Score=287.55  Aligned_cols=268  Identities=15%  Similarity=0.184  Sum_probs=213.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |+||||    ||+||||++++++|+ +||+|++++|+...                   +.....|.+++.+++++.++|
T Consensus         1 m~ilVt----GatG~iG~~l~~~L~-~g~~V~~~~r~~~~-------------------~~~D~~d~~~~~~~~~~~~~d   56 (299)
T 1n2s_A            1 MNILLF----GKTGQVGWELQRSLA-PVGNLIALDVHSKE-------------------FCGDFSNPKGVAETVRKLRPD   56 (299)
T ss_dssp             CEEEEE----CTTSHHHHHHHHHTT-TTSEEEEECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEE----CCCCHHHHHHHHHhh-cCCeEEEecccccc-------------------ccccCCCHHHHHHHHHhcCCC
Confidence            589999    999999999999999 89999999997621                   111223678888888875579


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH-----
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ-----  213 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~-----  213 (401)
                      +|||+|+.                |+.++.+++++|++.++ +|||+||.++|+.....++.|+++..+. +.|+     
T Consensus        57 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~-~~Y~~sK~~  134 (299)
T 1n2s_A           57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL-NVYGKTKLA  134 (299)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS-SHHHHHHHH
T ss_pred             EEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc-cHHHHHHHH
Confidence            99999984                46779999999999998 7999999999998777788898877664 4555     


Q ss_pred             HHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-C-CCc
Q 015746          214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A-SSN  291 (401)
Q Consensus       214 ~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~-~g~  291 (401)
                      +|+++.+...+++++||+++||++.. .++..++..+..+.++.++++  +.++|+|++|+|++++.+++++.. . .++
T Consensus       135 ~E~~~~~~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~  211 (299)
T 1n2s_A          135 GEKALQDNCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAG  211 (299)
T ss_dssp             HHHHHHHHCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred             HHHHHHHhCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCc
Confidence            45555556779999999999999764 466777788888888777764  779999999999999999987631 1 258


Q ss_pred             EEEecCCCCCCHHHHHHHHHHHhCCC------ceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHH
Q 015746          292 IFNLVSDRAVTLDGMAKLCAQAAGLP------VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED  365 (401)
Q Consensus       292 ~~~~~~~~~~t~~el~~~i~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~  365 (401)
                      +||+++++.+|++|+++.+.+.+|.+      ..+...+......     .........+|++|++++|||+|. +++|+
T Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~  285 (299)
T 1n2s_A          212 LYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPT-----PASRPGNSRLNTEKFQRNFDLILP-QWELG  285 (299)
T ss_dssp             EEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCC-----SSCCCSBCCBCCHHHHHHHTCCCC-BHHHH
T ss_pred             eEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccC-----cCCCCCceeeeHHHHHHhcCCCCC-CHHHH
Confidence            99999999999999999999999876      3344433211100     011235677899999999999997 89999


Q ss_pred             HHHHHHHHHHhc
Q 015746          366 LKERFEEYVKIG  377 (401)
Q Consensus       366 l~~~~~~~~~~~  377 (401)
                      |+++++||+++.
T Consensus       286 l~~~~~~~~~~~  297 (299)
T 1n2s_A          286 VKRMLTEMFTTT  297 (299)
T ss_dssp             HHHHHHHHHSCC
T ss_pred             HHHHHHHHHhcC
Confidence            999999998653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.7e-36  Score=286.17  Aligned_cols=274  Identities=16%  Similarity=0.147  Sum_probs=208.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +|+||||    ||+||||++++++|+++  ||+|++++|+.....            + ..+++++.+|   .+++.+++
T Consensus         2 ~~~vlVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~-~~~~~~~~~D~~d~~~~~~~~   64 (312)
T 2yy7_A            2 NPKILII----GACGQIGTELTQKLRKLYGTENVIASDIRKLNTD------------V-VNSGPFEVVNALDFNQIEHLV   64 (312)
T ss_dssp             CCCEEEE----TTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH------------H-HHSSCEEECCTTCHHHHHHHH
T ss_pred             CceEEEE----CCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc------------c-cCCCceEEecCCCHHHHHHHH
Confidence            5789999    99999999999999999  899999999764421            1 1256777777   67788888


Q ss_pred             cCCcccEEEeCCCC---------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCC-CCCCCCCCCCCCCChH
Q 015746          149 GGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHVEGDVVKPDAGHV  212 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~-~~~~E~~~~~~~~~~~  212 (401)
                      +..++|+|||+|+.               |+.++.+++++|++.++++|||+||.++|+.... .+..|+.+..+. +.|
T Consensus        65 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~-~~Y  143 (312)
T 2yy7_A           65 EVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS-TVY  143 (312)
T ss_dssp             HHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC-SHH
T ss_pred             hhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC-chh
Confidence            74457999999985               4678899999999999999999999999987532 456677665553 556


Q ss_pred             HHHH-----HHHH----hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          213 QVEK-----YISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       213 ~~ek-----~~~e----~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      +..|     ++..    .+++++++||+++||+....     ..+..++...+.++++.+++++++.++|+|++|+|+++
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  223 (312)
T 2yy7_A          144 GISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT  223 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHH
Confidence            5544     3332    38999999999999975321     12233334445556667788888899999999999999


Q ss_pred             HHHhcCCCcC--CCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCC
Q 015746          279 TLAVENPEAA--SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW  356 (401)
Q Consensus       279 ~~~~~~~~~~--~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~  356 (401)
                      +.+++++...  ++++||+++ +.+|+.|+++.+.+.+|. .++...+......      . ......+|++|++++|||
T Consensus       224 ~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~------~-~~~~~~~d~~k~~~~lG~  294 (312)
T 2yy7_A          224 INIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFRQKI------A-DSWPASIDDSQAREDWDW  294 (312)
T ss_dssp             HHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTHHHH------H-TTSCSSBCCHHHHHHHCC
T ss_pred             HHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCccccc------c-ccccccCCHHHHHHHcCC
Confidence            9999987642  248999996 789999999999999983 3333332211000      0 012345789999999999


Q ss_pred             CCCCCHHHHHHHHHHHHH
Q 015746          357 RSTTNLPEDLKERFEEYV  374 (401)
Q Consensus       357 ~p~~~l~e~l~~~~~~~~  374 (401)
                      +|+++++|+|+++++||+
T Consensus       295 ~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          295 KHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             CCCCCHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHhC
Confidence            999999999999999984

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-36  Score=283.65  Aligned_cols=274  Identities=16%  Similarity=0.198  Sum_probs=193.7

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC---
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV---  151 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~---  151 (401)
                      +||||    ||+||||++++++|+++| ++|++++|......         ...+....+.....|.+.+..++++.   
T Consensus         1 ~vlVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   67 (310)
T 1eq2_A            1 MIIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------FVNLVDLNIADYMDKEDFLIQIMAGEEFG   67 (310)
T ss_dssp             CEEEE----TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---------GHHHHTSCCSEEEEHHHHHHHHHTTCCCS
T ss_pred             CEEEE----cCccHHHHHHHHHHHHCCCcEEEEEccCCCCch---------hhhcCcceeccccccHHHHHHHHhccccC
Confidence            58999    999999999999999999 99999999764321         01111111333444577888888752   


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHH-
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK-  216 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek-  216 (401)
                      ++|+|||+|+.              |+.++.+++++|++.++ +|||+||.++|+.....+++|+++..+. +.|+..| 
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~-~~Y~~sK~  145 (310)
T 1eq2_A           68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL-NVYGYSKF  145 (310)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS-SHHHHHHH
T ss_pred             CCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC-ChhHHHHH
Confidence            47999999983              57789999999999999 9999999999998766678888776654 5565554 


Q ss_pred             ----HHHHh----CCCeEEEecCeeecCCCC-----CCcHHHHHHHHHcCCCcccCCCCcc-eeeeeeHHHHHHHHHHHh
Q 015746          217 ----YISEN----FSNWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAV  282 (401)
Q Consensus       217 ----~~~e~----g~~~~ilRp~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~D~a~~~~~~~  282 (401)
                          ++.+.    +++++++||+++||++..     ..++..++..+..++++.+++++.+ .++|+|++|+|++++.++
T Consensus       146 ~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~  225 (310)
T 1eq2_A          146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL  225 (310)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHH
Confidence                44332    789999999999999864     2467778888888888888888888 999999999999999999


Q ss_pred             cCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCC-ceEEecCCCcccccccccCCCccceEeechHHHHHhcCC-CCCC
Q 015746          283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW-RSTT  360 (401)
Q Consensus       283 ~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~-~p~~  360 (401)
                      +++.   +++||+++++.+|+.|+++.+.+.+|.+ .+....+....        ........+|++|+++ ||| .|.+
T Consensus       226 ~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-lG~~~~~~  293 (310)
T 1eq2_A          226 ENGV---SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRA-AGYDKPFK  293 (310)
T ss_dssp             HHCC---CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHH-TTCCCCCC
T ss_pred             hcCC---CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhh--------cccccccccchHHHHh-cCCCCCCC
Confidence            8766   4899999999999999999999999987 33322222100        0111345678899986 999 7888


Q ss_pred             CHHHHHHHHHHHHHHh
Q 015746          361 NLPEDLKERFEEYVKI  376 (401)
Q Consensus       361 ~l~e~l~~~~~~~~~~  376 (401)
                      +++|+|+++++||+++
T Consensus       294 ~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          294 TVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             CHHHHHHHHHHHTC--
T ss_pred             CHHHHHHHHHHHHHhc
Confidence            9999999999998753

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.7e-35  Score=284.33  Aligned_cols=293  Identities=19%  Similarity=0.170  Sum_probs=219.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|+||||    ||+||||++++++|+++||+|++++|+.+....      ..+..+. ..+++++.+|   .+++.+++
T Consensus         2 ~~~~vlVt----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (345)
T 2z1m_A            2 SGKRALIT----GIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS------WRLKELGIENDVKIIHMDLLEFSNIIRTI   71 (345)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT------HHHHHTTCTTTEEECCCCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCCccccc------ccHhhccccCceeEEECCCCCHHHHHHHH
Confidence            35899999    999999999999999999999999998754321      0111110 1256666676   67788888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-CEEEEecccccccCCCCCCCCCCCCCCCCCCh
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~  211 (401)
                      ++.++|+|||+|+.                |+.++.+++++|++.++ ++|||+||.++||.....+++|+.+..+. +.
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~-~~  150 (345)
T 2z1m_A           72 EKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR-SP  150 (345)
T ss_dssp             HHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SH
T ss_pred             HhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC-Ch
Confidence            76568999999984                46779999999999887 79999999999998777788888776553 56


Q ss_pred             HHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcH----HHHHHHHHcCCCc-ccCCCCcceeeeeeHHHHHHH
Q 015746          212 VQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       212 ~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      |+..|...|         .+++++++|+.++|||+......    ..++..+..+... ..++++.+.++|+|++|+|++
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a  230 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEA  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHH
Confidence            665554333         38899999999999998654432    2234455566543 356888888999999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEe--cCCCc---------ccccccccCCCccceEeec
Q 015746          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--YDPKA---------AGIDAKKAFPFRNMHFYAE  346 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~  346 (401)
                      ++.+++++..   ++||+++++.+++.|+++.+.+.+|.+.++..  +|...         .........+.......+|
T Consensus       231 ~~~~~~~~~~---~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  307 (345)
T 2z1m_A          231 MWLMMQQPEP---DDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGN  307 (345)
T ss_dssp             HHHHHTSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBC
T ss_pred             HHHHHhCCCC---ceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecC
Confidence            9999987652   79999999999999999999999998865431  11110         0000001112223456679


Q ss_pred             hHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          347 PRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       347 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      ++|++++|||+|+++++|+|+++++||++....
T Consensus       308 ~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  340 (345)
T 2z1m_A          308 PEKAMKKLGWKPRTTFDELVEIMMEADLKRVRD  340 (345)
T ss_dssp             CHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCcccCCHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999987543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=4.8e-35  Score=285.72  Aligned_cols=287  Identities=15%  Similarity=0.157  Sum_probs=216.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc--cCCCCCCCcccchhcC-CCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--KMKKPPFNRFNEIVSA-GGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~l~~~-~~~~~~~D---~~~~~~~  147 (401)
                      +|+||||    ||+||||++++++|+++||+|++++|+..+..  .+.... .... .... +++++.+|   .+++.++
T Consensus        28 ~k~vlVt----GatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~Dl~d~~~~~~~  101 (381)
T 1n7h_A           28 RKIALIT----GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIY-IDPH-NVNKALMKLHYADLTDASSLRRW  101 (381)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHH
T ss_pred             CCeEEEE----cCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhh-hccc-cccccceEEEECCCCCHHHHHHH
Confidence            3799999    99999999999999999999999999875421  111000 0000 0012 57778887   6677788


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC-----EEEEecccccccCCCCCCCCCCCCCC
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGDVVK  206 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~-----~~v~~SS~~vy~~~~~~~~~E~~~~~  206 (401)
                      +++.++|+|||+|+.                |+.++.+++++|++.+++     +|||+||.++|+.... +++|+++..
T Consensus       102 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~  180 (381)
T 1n7h_A          102 IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFH  180 (381)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCC
T ss_pred             HHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCC
Confidence            876567999999984                456789999999998776     9999999999998765 888888766


Q ss_pred             CCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcH----HHHHHHHHcCCCc-ccCCCCcceeeeeeHH
Q 015746          207 PDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPV-PIPGSGMQFTNIAHVR  272 (401)
Q Consensus       207 ~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~  272 (401)
                      +. +.|+..|...|         ++++++++|+.++|||+....+.    ..++..+..+.+. ..++++++.++|+|++
T Consensus       181 ~~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~  259 (381)
T 1n7h_A          181 PR-SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAG  259 (381)
T ss_dssp             CC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHH
T ss_pred             CC-CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHH
Confidence            54 56665554433         38889999999999998655432    3345556666543 4568888999999999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK  351 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  351 (401)
                      |+|++++.+++++.   +++||+++++.+++.|+++.+.+.+|.+.. ...+.+..       ..+.......+|++|++
T Consensus       260 Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~  329 (381)
T 1n7h_A          260 DYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAK  329 (381)
T ss_dssp             HHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHH
T ss_pred             HHHHHHHHHHhCCC---CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCccc-------CCccccccccCCHHHHH
Confidence            99999999998765   379999999999999999999999998632 11111110       01222245667999999


Q ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          352 DILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       352 ~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      ++|||+|+++++|+|+++++||+++..
T Consensus       330 ~~lG~~p~~~l~e~l~~~~~~~~~~~~  356 (381)
T 1n7h_A          330 EVLGWKPQVGFEKLVKMMVDEDLELAK  356 (381)
T ss_dssp             HHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCcccCCHHHHHHHHHHHHHhhcc
Confidence            999999988999999999999998753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.7e-35  Score=281.35  Aligned_cols=272  Identities=18%  Similarity=0.200  Sum_probs=200.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      +|+||||    ||+||||++++++|+++||+|++++|+....                .-+.....|++++.+++++.++
T Consensus         2 ~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------------~~~~~Dl~d~~~~~~~~~~~~~   61 (315)
T 2ydy_A            2 NRRVLVT----GATGLLGRAVHKEFQQNNWHAVGCGFRRARP----------------KFEQVNLLDSNAVHHIIHDFQP   61 (315)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCC
T ss_pred             CCeEEEE----CCCcHHHHHHHHHHHhCCCeEEEEccCCCCC----------------CeEEecCCCHHHHHHHHHhhCC
Confidence            5799999    9999999999999999999999999876420                0111222246667777776457


Q ss_pred             cEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH----
Q 015746          154 DVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ----  213 (401)
Q Consensus       154 d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~----  213 (401)
                      |+|||+|+.                |+.++.+++++|++.++ +|||+||.++|+. ...+++|+++..+. +.|+    
T Consensus        62 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~-~~Y~~sK~  138 (315)
T 2ydy_A           62 HVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPL-NLYGKTKL  138 (315)
T ss_dssp             SEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCC-SHHHHHHH
T ss_pred             CEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCc-CHHHHHHH
Confidence            999999983                57889999999999887 8999999999988 45678888876654 5555    


Q ss_pred             -HHHHHHHhCCCeEEEecCeeecCCCCC--CcHHHHHHHHH-cCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC--Cc
Q 015746          214 -VEKYISENFSNWASFRPQYMIGSGNNK--DCEEWFFDRIV-RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP--EA  287 (401)
Q Consensus       214 -~ek~~~e~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~  287 (401)
                       +|+++.+.++++++|||+.|||+....  .++..++..+. .+.++.+.+  ++.++|+|++|+|++++.+++++  ..
T Consensus       139 ~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~~~~~~~~~~~  216 (315)
T 2ydy_A          139 DGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDH--WQQRFPTHVKDVATVCRQLAEKRMLDP  216 (315)
T ss_dssp             HHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEEC--SSBBCCEEHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeecc--CceECcEEHHHHHHHHHHHHHhhcccc
Confidence             555566668999999999999997652  35555666676 677665544  56789999999999999998764  11


Q ss_pred             CCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHH
Q 015746          288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL  366 (401)
Q Consensus       288 ~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l  366 (401)
                      ..+++||+++++.+++.|+++.+.+.+|.+.. +..++... .     ....+.....+|++|+++. ||+|.++++|+|
T Consensus       217 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~-----~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l  289 (315)
T 2ydy_A          217 SIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSP-V-----LGAQRPRNAQLDCSKLETL-GIGQRTPFRIGI  289 (315)
T ss_dssp             TCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCC-C-----SSSCCCSBCCBCCHHHHHT-TCCCCCCHHHHH
T ss_pred             CCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheecccccc-c-----cccCCCcccccchHHHHhc-CCCCCCCHHHHH
Confidence            22589999999999999999999999998754 43443200 0     0011224667899999987 999999999999


Q ss_pred             HHHHHHHHHhc
Q 015746          367 KERFEEYVKIG  377 (401)
Q Consensus       367 ~~~~~~~~~~~  377 (401)
                      +++++||++++
T Consensus       290 ~~~~~~~~~~~  300 (315)
T 2ydy_A          290 KESLWPFLIDK  300 (315)
T ss_dssp             HHHHGGGCC--
T ss_pred             HHHHHHHccch
Confidence            99999998663

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=8.5e-35  Score=281.82  Aligned_cols=287  Identities=16%  Similarity=0.159  Sum_probs=219.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-----CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~  145 (401)
                      +|+||||    ||+||||++++++|+++|     |+|++++|......            +...+++++.+|   .+++.
T Consensus         1 ~~~vlVt----GatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------------~~~~~~~~~~~Dl~d~~~~~   64 (364)
T 2v6g_A            1 SSVALIV----GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------------HEDNPINYVQCDISDPDDSQ   64 (364)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------------CCSSCCEEEECCTTSHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------------cccCceEEEEeecCCHHHHH
Confidence            3789999    999999999999999999     99999999875432            112367788887   67788


Q ss_pred             HhhcCCc-ccEEEeCCCC-----------ChhhHHHHHHHHHhC--CCCEEE-------EecccccccCC--CCCCCCCC
Q 015746          146 NVVGGVT-FDVVLDNNGK-----------NLDAVRPVADWAKSS--GVKQFL-------FISSAGIYKPA--DEPPHVEG  202 (401)
Q Consensus       146 ~~~~~~~-~d~Vv~~a~~-----------~~~~~~~ll~aa~~~--gv~~~v-------~~SS~~vy~~~--~~~~~~E~  202 (401)
                      +++++.+ +|+|||+|+.           |+.++.+++++|++.  ++++||       |+||.++||..  ...+++|+
T Consensus        65 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~  144 (364)
T 2v6g_A           65 AKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTED  144 (364)
T ss_dssp             HHHTTCTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTT
T ss_pred             HHHhcCCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcc
Confidence            8888865 7999999984           678899999999998  899998       89999999875  34578888


Q ss_pred             CCCCCCCC-hHHHHHHHHHh----C-CCeEEEecCeeecCCCCC--C-cHHH-HHHHH--HcCCCcccCCCCc---ceee
Q 015746          203 DVVKPDAG-HVQVEKYISEN----F-SNWASFRPQYMIGSGNNK--D-CEEW-FFDRI--VRKRPVPIPGSGM---QFTN  267 (401)
Q Consensus       203 ~~~~~~~~-~~~~ek~~~e~----g-~~~~ilRp~~v~G~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~~~---~~~~  267 (401)
                      ++..+..+ .+.+|+++.++    + ++++++||++|||++...  . .... ++..+  ..+.++.++++++   ...+
T Consensus       145 ~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~  224 (364)
T 2v6g_A          145 LPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSD  224 (364)
T ss_dssp             SCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBC
T ss_pred             ccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCC
Confidence            77655323 45677777663    5 999999999999997653  2 2333 23444  3678877788874   4478


Q ss_pred             eeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEE--ecCCCcccccc-----------c-
Q 015746          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV--HYDPKAAGIDA-----------K-  333 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~-----------~-  333 (401)
                      ++|++|+|++++.+++++... |++||+++++.+|+.|+++.+.+.+|.+....  .++........           . 
T Consensus       225 ~~~v~Dva~a~~~~~~~~~~~-g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  303 (364)
T 2v6g_A          225 CSDADLIAEHHIWAAVDPYAK-NEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVREN  303 (364)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGT-TEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHHhCCCCC-CceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHh
Confidence            889999999999999987543 58999999999999999999999999876543  33322000000           0 


Q ss_pred             ccCCC---c-----------cce-EeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          334 KAFPF---R-----------NMH-FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       334 ~~~~~---~-----------~~~-~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      ...+.   .           ... +.+|++|+++ |||+|.++++|+|+++++||++.+.
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g~  362 (364)
T 2v6g_A          304 GLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYKI  362 (364)
T ss_dssp             TCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTTS
T ss_pred             CCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            00010   0           033 5789999988 9999989999999999999998764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=6.4e-34  Score=270.57  Aligned_cols=273  Identities=16%  Similarity=0.130  Sum_probs=206.4

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +||||    ||+||||++++++|+++  |++|++++|......                +++++.+|   ++++.++++.
T Consensus         1 ~vlVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------------~~~~~~~D~~d~~~~~~~~~~   60 (317)
T 3ajr_A            1 MILVT----GSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------------GIKFITLDVSNRDEIDRAVEK   60 (317)
T ss_dssp             CEEEE----STTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------------TCCEEECCTTCHHHHHHHHHH
T ss_pred             CEEEE----cCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------------CceEEEecCCCHHHHHHHHhh
Confidence            59999    99999999999999999  899999998764321                35566676   6778888874


Q ss_pred             CcccEEEeCCCC---------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC-CCCCCCCCCCCCCCChHHH
Q 015746          151 VTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQV  214 (401)
Q Consensus       151 ~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~-~~~~~E~~~~~~~~~~~~~  214 (401)
                      .++|+|||+|+.               |+.++.+++++|++.++++|||+||.++|+... ..+..|+.+..+. +.|+.
T Consensus        61 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~-~~Y~~  139 (317)
T 3ajr_A           61 YSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR-TMFGV  139 (317)
T ss_dssp             TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC-SHHHH
T ss_pred             cCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCC-chHHH
Confidence            457999999984               467889999999999999999999999998752 3456666655543 56665


Q ss_pred             HHHHHH---------hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHH
Q 015746          215 EKYISE---------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (401)
Q Consensus       215 ek~~~e---------~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~  280 (401)
                      .|...|         .+++++++||+++||+....     .....++...+.++++..++++++.++|+|++|+|++++.
T Consensus       140 sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  219 (317)
T 3ajr_A          140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVD  219 (317)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHH
Confidence            554333         48999999999999975321     2222334445556666777778889999999999999999


Q ss_pred             HhcCCCcC--CCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCC
Q 015746          281 AVENPEAA--SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS  358 (401)
Q Consensus       281 ~~~~~~~~--~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p  358 (401)
                      +++++...  .|++||+++ ..+++.|+++.+.+.+|. .++...+......  .     ......+|++|++++|||+|
T Consensus       220 ~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~--~-----~~~~~~~d~~k~~~~lG~~p  290 (317)
T 3ajr_A          220 LYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKI--A-----ATWPESLDSSEASNEWGFSI  290 (317)
T ss_dssp             HHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHH--H-----TTSCSCBCCHHHHHHHCCCC
T ss_pred             HHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhh--c-----cccccccCHHHHHHHcCCCC
Confidence            99887542  258999986 579999999999999983 2332222100000  0     01234578999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHhcC
Q 015746          359 TTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       359 ~~~l~e~l~~~~~~~~~~~~  378 (401)
                      .++++|+|+++++||+++..
T Consensus       291 ~~~~~~~l~~~~~~~~~~~~  310 (317)
T 3ajr_A          291 EYDLDRTIDDMIDHISEKLG  310 (317)
T ss_dssp             CCCHHHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHhhhc
Confidence            99999999999999998754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=3.8e-34  Score=300.64  Aligned_cols=288  Identities=19%  Similarity=0.228  Sum_probs=212.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+||||++++++|+++|++|++++|........    ...+..+...+++++.+|   .+++.+++
T Consensus         9 ~~~~~ilVT----GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~----~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~   80 (699)
T 1z45_A            9 STSKIVLVT----GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDS----VARLEVLTKHHIPFYEVDLCDRKGLEKVF   80 (699)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHH----HHHHHHHHTSCCCEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHH----HHHHhhccCCceEEEEcCCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999976432110    001112223577888888   66778888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC----CCCCCCCCCCCCC
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPD  208 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~----~~~~~E~~~~~~~  208 (401)
                      +..++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+...    ..++.|+.+..+.
T Consensus        81 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~  160 (699)
T 1z45_A           81 KEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT  160 (699)
T ss_dssp             HHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC
T ss_pred             HhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCC
Confidence            74457999999984                467889999999999999999999999998642    2466777665543


Q ss_pred             CChHH-----HHHHHHH------hCCCeEEEecCeeecCCCC-----------CCcHHHHHHHHHcC--CCcccCC----
Q 015746          209 AGHVQ-----VEKYISE------NFSNWASFRPQYMIGSGNN-----------KDCEEWFFDRIVRK--RPVPIPG----  260 (401)
Q Consensus       209 ~~~~~-----~ek~~~e------~g~~~~ilRp~~v~G~~~~-----------~~~~~~~~~~~~~~--~~~~~~~----  260 (401)
                       +.|+     +|+++.+      .+++++++||+++||++..           ..++.. +..+..+  +++.+++    
T Consensus       161 -~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~  238 (699)
T 1z45_A          161 -NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPY-MAQVAVGRREKLYIFGDDYD  238 (699)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH-HHHHHTTSSSCCCCC-----
T ss_pred             -ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHH-HHHHHhcCCCceEEeCCccc
Confidence             4454     4554443      4789999999999998532           123333 3344433  4666776    


Q ss_pred             --CCcceeeeeeHHHHHHHHHHHhcCCC-----cCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccccccc
Q 015746          261 --SGMQFTNIAHVRDLSSMLTLAVENPE-----AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK  333 (401)
Q Consensus       261 --~~~~~~~~v~v~D~a~~~~~~~~~~~-----~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  333 (401)
                        ++.+.++|||++|+|++++.+++...     ...+++||+++++.+++.|+++.+++.+|.+.++...+....     
T Consensus       239 ~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----  313 (699)
T 1z45_A          239 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAG-----  313 (699)
T ss_dssp             -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-------------
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCC-----
Confidence              67889999999999999999987421     111479999999999999999999999998766543322111     


Q ss_pred             ccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          334 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       334 ~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                           ....+.+|++|++++|||+|+++++|+|+++++||+++...
T Consensus       314 -----~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~  354 (699)
T 1z45_A          314 -----DVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFG  354 (699)
T ss_dssp             ------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred             -----ccccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcc
Confidence                 12456789999999999999999999999999999987543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=7e-34  Score=268.34  Aligned_cols=263  Identities=19%  Similarity=0.182  Sum_probs=194.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      ||||||    |||||||++|+++|+++||+|++++|++....                    +..| +.....+++  +|
T Consensus         1 MkILVT----GatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~--------------------~~~~-~~~~~~l~~--~d   53 (298)
T 4b4o_A            1 MRVLVG----GGTGFIGTALTQLLNARGHEVTLVSRKPGPGR--------------------ITWD-ELAASGLPS--CD   53 (298)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE--------------------EEHH-HHHHHCCCS--CS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe--------------------eecc-hhhHhhccC--CC
Confidence            789999    99999999999999999999999999763211                    1112 122334555  49


Q ss_pred             EEEeCCCC--------------------ChhhHHHHHHHHHhCCCC--EEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          155 VVLDNNGK--------------------NLDAVRPVADWAKSSGVK--QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       155 ~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~--~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      +|||+++.                    |+.++.++++++++.+.+  +||++||.++|++....+..|+++..+. ..+
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~-~~~  132 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF-DFF  132 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS-SHH
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc-chh
Confidence            99999973                    367788999999988754  6999999999999888889998877654 333


Q ss_pred             HHHHHH-------HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC
Q 015746          213 QVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (401)
Q Consensus       213 ~~ek~~-------~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~  285 (401)
                      ...+..       .+.+++++++|++.|||+++.  .+..++.....+. ...+|+++++++|||++|+++++..+++++
T Consensus       133 ~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~--~~~~~~~~~~~~~-~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~  209 (298)
T 4b4o_A          133 SNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGG--AMGHMLLPFRLGL-GGPIGSGHQFFPWIHIGDLAGILTHALEAN  209 (298)
T ss_dssp             HHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSH--HHHHHHHHHHTTC-CCCBTTSCSBCCEEEHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCC--chhHHHHHHhcCC-cceecccCceeecCcHHHHHHHHHHHHhCC
Confidence            322221       123788999999999999752  4444444444444 456689999999999999999999999998


Q ss_pred             CcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccccccccc-CCCccceEeechHHHHHhcCCCCCC-CHH
Q 015746          286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNMHFYAEPRAAKDILGWRSTT-NLP  363 (401)
Q Consensus       286 ~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~lG~~p~~-~l~  363 (401)
                      ..  +++||+++++++|++|+++.+++.+|++..+ ++|.........+. .........+.++|+++ +||++++ +++
T Consensus       210 ~~--~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~-pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~-~Gf~f~yp~l~  285 (298)
T 4b4o_A          210 HV--HGVLNGVAPSSATNAEFAQTFGAALGRRAFI-PLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLA-TGYQYSFPELG  285 (298)
T ss_dssp             TC--CEEEEESCSCCCBHHHHHHHHHHHHTCCCCC-CBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHH-TTCCCSCCSHH
T ss_pred             CC--CCeEEEECCCccCHHHHHHHHHHHhCcCCcc-cCCHHHHHHHhcchhHHHhhCCCEEcHHHHHH-CCCCCCCCCHH
Confidence            76  3699999999999999999999999987643 44432211100000 00001233466788875 9999988 799


Q ss_pred             HHHHHHHHH
Q 015746          364 EDLKERFEE  372 (401)
Q Consensus       364 e~l~~~~~~  372 (401)
                      ++|+++++.
T Consensus       286 ~al~~l~~~  294 (298)
T 4b4o_A          286 AALKEIAEN  294 (298)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHHh
Confidence            999998873

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=2.6e-34  Score=299.82  Aligned_cols=289  Identities=18%  Similarity=0.227  Sum_probs=221.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hh-HHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AE-VGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~-~~~~  147 (401)
                      ++|+||||    ||+||||++++++|+++ ||+|++++|+..+...+.          ...+++++.+|.   ++ +.++
T Consensus       314 ~~~~VLVT----GatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----------~~~~v~~v~~Dl~d~~~~~~~~  379 (660)
T 1z7e_A          314 RRTRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYH  379 (660)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----------TCTTEEEEECCTTTCHHHHHHH
T ss_pred             cCceEEEE----cCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----------cCCceEEEECCCCCcHHHHHHh
Confidence            46899999    99999999999999998 899999999875543211          123678888883   23 5667


Q ss_pred             hcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC------
Q 015746          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------  205 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~------  205 (401)
                      +++  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||.++|+.....+++|+++.      
T Consensus       380 ~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~  456 (660)
T 1z7e_A          380 VKK--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  456 (660)
T ss_dssp             HHH--CSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCT
T ss_pred             hcC--CCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcc
Confidence            765  5999999984                4678999999999999 89999999999998766778887752      


Q ss_pred             CCCCChHH-----HHHHHH----HhCCCeEEEecCeeecCCCC---------CCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          206 KPDAGHVQ-----VEKYIS----ENFSNWASFRPQYMIGSGNN---------KDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       206 ~~~~~~~~-----~ek~~~----e~g~~~~ilRp~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                      ..+.+.|+     +|+++.    +.+++++++||+++||++..         ...+..++..+..+.++.+++++++.++
T Consensus       457 ~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~  536 (660)
T 1z7e_A          457 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  536 (660)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEE
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEE
Confidence            11123454     455443    34899999999999999764         3456777888888998888888889999


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC-CCCHHHHHHHHHHHhCCCceEEecCCCccc--ccccc---cCCCcc
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVEIVHYDPKAAG--IDAKK---AFPFRN  340 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~-~~t~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~~---~~~~~~  340 (401)
                      |+|++|+|++++.+++++.. ..|++||+++++ .+++.|+++.+.+.+|.+.....++.....  .....   ......
T Consensus       537 ~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  616 (660)
T 1z7e_A          537 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDV  616 (660)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCC
T ss_pred             EEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccch
Confidence            99999999999999988652 236899999986 899999999999999865332223321100  00000   000112


Q ss_pred             ceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          341 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       341 ~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      ....+|++|++++|||+|+++++|+|+++++||+++..
T Consensus       617 ~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~  654 (660)
T 1z7e_A          617 EHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_dssp             SCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred             hhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence            45668999999999999999999999999999998764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=7.2e-33  Score=266.18  Aligned_cols=278  Identities=16%  Similarity=0.141  Sum_probs=211.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCC-------CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---H
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~  141 (401)
                      .++|+||||    ||+||||++++++|+++|       ++|++++|..+....           ....+++++.+|   .
T Consensus        12 ~~~~~vlVt----Ga~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----------~~~~~~~~~~~Dl~d~   76 (342)
T 2hrz_A           12 FQGMHIAII----GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----------GFSGAVDARAADLSAP   76 (342)
T ss_dssp             CSCEEEEEE----TTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----------TCCSEEEEEECCTTST
T ss_pred             ccCCEEEEE----CCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----------ccCCceeEEEcCCCCH
Confidence            346899999    999999999999999999       899999998653321           011356677777   5


Q ss_pred             hhHHHhhcCCcccEEEeCCCC---------------ChhhHHHHHHHHHhCC-----CCEEEEecccccccCCCCCCCCC
Q 015746          142 AEVGNVVGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-----VKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~g-----v~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +++.+++.+ ++|+|||+|+.               |+.++.+++++|++.+     +++|||+||.++|+.....+++|
T Consensus        77 ~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E  155 (342)
T 2hrz_A           77 GEAEKLVEA-RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPD  155 (342)
T ss_dssp             THHHHHHHT-CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCT
T ss_pred             HHHHHHHhc-CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCC
Confidence            677777752 36999999994               5678899999999876     78999999999999765568888


Q ss_pred             CCCCCCCCChHHHHHHHHH-----h----CCCeEEEecCeeec-CCCCC----CcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          202 GDVVKPDAGHVQVEKYISE-----N----FSNWASFRPQYMIG-SGNNK----DCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e-----~----g~~~~ilRp~~v~G-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                      +++..+. +.|+..|...|     +    +++++++|++.+|| |+...    .++..++..+..+++..++++++...+
T Consensus       156 ~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (342)
T 2hrz_A          156 EFHTTPL-TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHW  234 (342)
T ss_dssp             TCCCCCS-SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEE
T ss_pred             CCCCCCc-chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCcccee
Confidence            8877654 56665554433     2    68899999999998 65432    245566777788887767666677788


Q ss_pred             eeeHHHHHHHHHHHhcCCCc--CCCcEEEecCCCCCCHHHHHHHHHHHhCCCc--eEEecCCCcccccccccCCCccceE
Q 015746          268 IAHVRDLSSMLTLAVENPEA--ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV--EIVHYDPKAAGIDAKKAFPFRNMHF  343 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~--~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  343 (401)
                      ++|++|+|++++.+++.+..  ..+++||++ ++.+++.|+++.+.+.+|.+.  .+...+....... .     .....
T Consensus       235 ~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~-~-----~~~~~  307 (342)
T 2hrz_A          235 HASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRM-C-----EGWAP  307 (342)
T ss_dssp             EECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHH-H-----TTSCC
T ss_pred             eEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhh-h-----ccccc
Confidence            99999999999999987653  125899996 567999999999999999764  2333332211000 0     00123


Q ss_pred             eechHHHHHhcCCCCCCCHHHHHHHHHHHHH
Q 015746          344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYV  374 (401)
Q Consensus       344 ~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~  374 (401)
                      .+|++|+++ |||+|+++++|+|+++++||+
T Consensus       308 ~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          308 GFEAKRARE-LGFTAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             CBCCHHHHH-TTCCCCSSHHHHHHHHHHHHS
T ss_pred             ccChHHHHH-cCCCCCCCHHHHHHHHHHHhc
Confidence            578999998 999999999999999999997

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=7e-33  Score=265.86  Aligned_cols=278  Identities=19%  Similarity=0.180  Sum_probs=194.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|+||||    ||+||||++|+++|+++||+|+++.|+.++.....     .+..+ ...+++++.+|   .+++.+++
T Consensus         8 ~~~~vlVT----GatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T 2rh8_A            8 GKKTACVV----GGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-----HLLELQELGDLKIFRADLTDELSFEAPI   78 (338)
T ss_dssp             -CCEEEEE----CTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-----HHHHHGGGSCEEEEECCTTTSSSSHHHH
T ss_pred             CCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-----HHHhcCCCCcEEEEecCCCChHHHHHHH
Confidence            36899999    99999999999999999999999999765432110     00111 12367788887   56677888


Q ss_pred             cCCcccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CCEEEEecccc-cccCC---CCCCCCCCCCC---
Q 015746          149 GGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAG-IYKPA---DEPPHVEGDVV---  205 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~-vy~~~---~~~~~~E~~~~---  205 (401)
                      +++  |+|||+|+.               |+.++.+++++|++.+ +++|||+||.+ +|+..   ...+++|+++.   
T Consensus        79 ~~~--D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  156 (338)
T 2rh8_A           79 AGC--DFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIE  156 (338)
T ss_dssp             TTC--SEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-
T ss_pred             cCC--CEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchh
Confidence            775  999999872               4678999999999986 89999999987 44321   11256666421   


Q ss_pred             ----------CCCCChHHHHHHHHH----hCCCeEEEecCeeecCCCCCCcHHHH--HHHHHcCCCcccCCCC------c
Q 015746          206 ----------KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWF--FDRIVRKRPVPIPGSG------M  263 (401)
Q Consensus       206 ----------~~~~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~  263 (401)
                                .+..+|..+|+++.+    .|+++++|||++||||+........+  +..+..+.+. .++..      .
T Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~  235 (338)
T 2rh8_A          157 FLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLS  235 (338)
T ss_dssp             ------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHH
T ss_pred             hccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-cccccccccccc
Confidence                      245677788876644    48999999999999997644321111  1122344432 22211      1


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCC-CceEEecCCCcccccccccCCCccce
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMH  342 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (401)
                      ..++|+|++|+|++++.+++++..  ++.|+++++ .+++.|+++.+.+.++. +.+.     .....      +.. ..
T Consensus       236 ~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~~~-~~s~~e~~~~l~~~~~~~~~~~-----~~~~~------~~~-~~  300 (338)
T 2rh8_A          236 GSVSIAHVEDVCRAHIFVAEKESA--SGRYICCAA-NTSVPELAKFLSKRYPQYKVPT-----DFGDF------PPK-SK  300 (338)
T ss_dssp             SSEEEEEHHHHHHHHHHHHHCTTC--CEEEEECSE-EECHHHHHHHHHHHCTTSCCCC-----CCTTS------CSS-CS
T ss_pred             CcccEEEHHHHHHHHHHHHcCCCc--CCcEEEecC-CCCHHHHHHHHHHhCCCCCCCC-----CCCCC------CcC-cc
Confidence            224899999999999999987554  357888764 59999999999998862 2211     10000      000 12


Q ss_pred             EeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       343 ~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      ..+|++|+ ++|||+|+++++|+|+++++||++.+.
T Consensus       301 ~~~d~~k~-~~lG~~p~~~l~~gl~~~~~~~~~~~~  335 (338)
T 2rh8_A          301 LIISSEKL-VKEGFSFKYGIEEIYDESVEYFKAKGL  335 (338)
T ss_dssp             CCCCCHHH-HHHTCCCSCCHHHHHHHHHHHHHHTTC
T ss_pred             eeechHHH-HHhCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            56889999 569999999999999999999987753

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=3.3e-32  Score=261.19  Aligned_cols=287  Identities=16%  Similarity=0.143  Sum_probs=194.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+||||++++++|+++||+|++++|+.+...+....  ..+.. ...+++++.+|   .+++.++++
T Consensus         4 ~~~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   76 (337)
T 2c29_D            4 QSETVCVT----GASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL--LDLPK-AETHLTLWKADLADEGSFDEAIK   76 (337)
T ss_dssp             --CEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHH--HTSTT-HHHHEEEEECCTTSTTTTHHHHT
T ss_pred             CCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHH--Hhccc-CCCeEEEEEcCCCCHHHHHHHHc
Confidence            46899999    9999999999999999999999999987532111000  00000 01246677777   567888888


Q ss_pred             CCcccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CCEEEEecccc-cccCCC-CCCCCCCCCCC-----
Q 015746          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAG-IYKPAD-EPPHVEGDVVK-----  206 (401)
Q Consensus       150 ~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~g-v~~~v~~SS~~-vy~~~~-~~~~~E~~~~~-----  206 (401)
                      ++  |+|||+|+.               |+.++.+++++|++.+ +++|||+||.+ +|+... ..+++|+.+..     
T Consensus        77 ~~--d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~  154 (337)
T 2c29_D           77 GC--TGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCR  154 (337)
T ss_dssp             TC--SEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHH
T ss_pred             CC--CEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhc
Confidence            75  999999973               4678899999999887 89999999987 454322 23456665321     


Q ss_pred             ---CCCChHHHHHHHH---------HhCCCeEEEecCeeecCCCCCCcHHHHHHH--HHcCCCcccCCCCcceeeeeeHH
Q 015746          207 ---PDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDR--IVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       207 ---~~~~~~~~ek~~~---------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                         +..+.|+..|.+.         ++|++++++||++||||.....+...+...  ...+.+. .++.+ ....|+|++
T Consensus       155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~  232 (337)
T 2c29_D          155 AKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLD  232 (337)
T ss_dssp             HHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHH
T ss_pred             ccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHH
Confidence               1223465555333         248999999999999997654322222111  1334332 22222 224599999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCC-CceEEecCCCcccccccccCCCccceEeechHHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK  351 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  351 (401)
                      |+|++++.+++++..  ++.|++++ ..++++|+++.+.+.++. +.+.     ....      .+.......+|++|+ 
T Consensus       233 Dva~a~~~~~~~~~~--~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~-----~~~~------~~~~~~~~~~d~~k~-  297 (337)
T 2c29_D          233 DLCNAHIYLFENPKA--EGRYICSS-HDCIILDLAKMLREKYPEYNIPT-----EFKG------VDENLKSVCFSSKKL-  297 (337)
T ss_dssp             HHHHHHHHHHHCTTC--CEEEEECC-EEEEHHHHHHHHHHHCTTSCCCS-----CCTT------CCTTCCCCEECCHHH-
T ss_pred             HHHHHHHHHhcCccc--CceEEEeC-CCCCHHHHHHHHHHHCCCccCCC-----CCCc------ccCCCccccccHHHH-
Confidence            999999999987544  35787665 458999999999998742 2211     1000      011124567899999 


Q ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHhcCCCccCCh
Q 015746          352 DILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF  385 (401)
Q Consensus       352 ~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~  385 (401)
                      ++|||+|+++++|+|+++++||++.+..+...+.
T Consensus       298 ~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~  331 (337)
T 2c29_D          298 TDLGFEFKYSLEDMFTGAVDTCRAKGLLPPSHEK  331 (337)
T ss_dssp             HHHTCCCCCCHHHHHHHHHHHHHHTTSSCSCC--
T ss_pred             HHcCCCcCCCHHHHHHHHHHHHHHcCCCCccccC
Confidence            6799999999999999999999988766544443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.6e-32  Score=278.28  Aligned_cols=266  Identities=17%  Similarity=0.171  Sum_probs=190.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH-hhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~-~~~~~~~~~~~  152 (401)
                      +|+||||    ||+||||++|+++|+++||+|++++|+..+...                   +.+|. +.+..++.+  
T Consensus       147 ~m~VLVT----GatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~-------------------v~~d~~~~~~~~l~~--  201 (516)
T 3oh8_A          147 PLTVAIT----GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK-------------------RFWDPLNPASDLLDG--  201 (516)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC-------------------EECCTTSCCTTTTTT--
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc-------------------eeecccchhHHhcCC--
Confidence            7899999    999999999999999999999999998864321                   22332 223444554  


Q ss_pred             ccEEEeCCCC-----------------ChhhHHHHHHH-HHhCCCCEEEEeccccccc-CCCCCCCCCCCCCCCCCChHH
Q 015746          153 FDVVLDNNGK-----------------NLDAVRPVADW-AKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQ  213 (401)
Q Consensus       153 ~d~Vv~~a~~-----------------~~~~~~~ll~a-a~~~gv~~~v~~SS~~vy~-~~~~~~~~E~~~~~~~~~~~~  213 (401)
                      +|+|||+|+.                 |+.++.+++++ +++.++++|||+||.++|+ .....+++|+.+..  .+.|+
T Consensus       202 ~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~--~~~y~  279 (516)
T 3oh8_A          202 ADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESG--DDFLA  279 (516)
T ss_dssp             CSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCC--SSHHH
T ss_pred             CCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCC--cChHH
Confidence            5999999984                 67889999999 6777899999999999998 44455778877662  35554


Q ss_pred             HHHH--------HHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC
Q 015746          214 VEKY--------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (401)
Q Consensus       214 ~ek~--------~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~  285 (401)
                      ..+.        +.+.|++++++||++|||++.  ..+..++..+..+.. .+++++++.++|+|++|+|++++.+++++
T Consensus       280 ~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  356 (516)
T 3oh8_A          280 EVCRDWEHATAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDA  356 (516)
T ss_dssp             HHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCc
Confidence            3332        234599999999999999974  355555544444443 46788999999999999999999999987


Q ss_pred             CcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCccccccccc--CCCccceEeechHHHHHhcCCCCCCC-H
Q 015746          286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA--FPFRNMHFYAEPRAAKDILGWRSTTN-L  362 (401)
Q Consensus       286 ~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~~lG~~p~~~-l  362 (401)
                      ..  +++||+++++.+|+.|+++.+++.+|.+. ...+|.........+.  .........++++|++ .|||+|+++ +
T Consensus       357 ~~--~g~~ni~~~~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l  432 (516)
T 3oh8_A          357 QI--SGPINAVAPNPVSNADMTKILATSMHRPA-FIQIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYTDI  432 (516)
T ss_dssp             TC--CEEEEESCSCCEEHHHHHHHTTC----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCSSH
T ss_pred             cc--CCcEEEECCCCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCCCH
Confidence            65  36999999999999999999999999876 3334433222111111  1112345667889998 599999986 9


Q ss_pred             HHHHHHHHHHH
Q 015746          363 PEDLKERFEEY  373 (401)
Q Consensus       363 ~e~l~~~~~~~  373 (401)
                      +++|++++++.
T Consensus       433 ~e~l~~~l~~~  443 (516)
T 3oh8_A          433 GAAIAHELGYE  443 (516)
T ss_dssp             HHHHHHHHTCC
T ss_pred             HHHHHHHhCcc
Confidence            99999988754

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=3.3e-33  Score=268.10  Aligned_cols=278  Identities=13%  Similarity=0.057  Sum_probs=200.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEE-EcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D---~~~~~~~  147 (401)
                      +++|+||||    ||+||||++++++|+++||+|++++|+.++...+..    .+......+++++ .+|   .+++.++
T Consensus         9 ~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~   80 (342)
T 1y1p_A            9 PEGSLVLVT----GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK----RWDAKYPGRFETAVVEDMLKQGAYDEV   80 (342)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHHHSTTTEEEEECSCTTSTTTTTTT
T ss_pred             CCCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHH----HhhccCCCceEEEEecCCcChHHHHHH
Confidence            456899999    999999999999999999999999997643321100    0000001356666 677   5566667


Q ss_pred             hcCCcccEEEeCCCC-------------ChhhHHHHHHHHHh-CCCCEEEEecccccccCCC----CCCCCCCCCC----
Q 015746          148 VGGVTFDVVLDNNGK-------------NLDAVRPVADWAKS-SGVKQFLFISSAGIYKPAD----EPPHVEGDVV----  205 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~-~gv~~~v~~SS~~vy~~~~----~~~~~E~~~~----  205 (401)
                      +++  +|+|||+|+.             |+.++.+++++|++ .++++|||+||.++|+...    ..+++|+++.    
T Consensus        81 ~~~--~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  158 (342)
T 1y1p_A           81 IKG--AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI  158 (342)
T ss_dssp             TTT--CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred             HcC--CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhh
Confidence            764  6999999984             57889999999985 6789999999999986432    1467777631    


Q ss_pred             -----------CCCCChHHHHH-----HHHHh------CCCeEEEecCeeecCCCCCC----cHHHHHHHHHcCCCcccC
Q 015746          206 -----------KPDAGHVQVEK-----YISEN------FSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       206 -----------~~~~~~~~~ek-----~~~e~------g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~  259 (401)
                                 ..+.+.|+..|     ++..+      +++++++||+++||+.....    .+..++..+..+++..++
T Consensus       159 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (342)
T 1y1p_A          159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             hhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccc
Confidence                       11123455444     44332      67899999999999975432    567788888888887766


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCc
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR  339 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  339 (401)
                      +++ +.++|+|++|+|++++.+++++... |+.+. ..++.+|+.|+++.+.+.+|.+ .+ ..+.....          
T Consensus       239 ~~~-~~~~~v~v~Dva~a~~~~~~~~~~~-g~~~~-~~g~~~s~~e~~~~i~~~~~~~-~~-~~~~~~~~----------  303 (342)
T 1y1p_A          239 ALM-PPQYYVSAVDIGLLHLGCLVLPQIE-RRRVY-GTAGTFDWNTVLATFRKLYPSK-TF-PADFPDQG----------  303 (342)
T ss_dssp             HTC-CSEEEEEHHHHHHHHHHHHHCTTCC-SCEEE-ECCEEECHHHHHHHHHHHCTTS-CC-CCCCCCCC----------
T ss_pred             ccC-CcCCEeEHHHHHHHHHHHHcCcccC-CceEE-EeCCCCCHHHHHHHHHHHCCCc-cC-CCCCCccc----------
Confidence            665 6789999999999999999875433 35554 4456799999999999999875 21 11111000          


Q ss_pred             cceEeechHHHHHhcCC---CCCCCHHHHHHHHHHHHH
Q 015746          340 NMHFYAEPRAAKDILGW---RSTTNLPEDLKERFEEYV  374 (401)
Q Consensus       340 ~~~~~~~~~k~~~~lG~---~p~~~l~e~l~~~~~~~~  374 (401)
                      .....+|++|+++.|||   .+.++++|+|+++++||+
T Consensus       304 ~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          304 QDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             CCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             cccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence            12356799999998887   465799999999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=1.5e-32  Score=257.41  Aligned_cols=261  Identities=16%  Similarity=0.188  Sum_probs=199.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      |+||||    |||||||++++++|+++  ||+|++++|+.++..           .+...+++++.+|   ++++.++++
T Consensus         1 ~~ilVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~l~~~~~~~~~~D~~d~~~l~~~~~   65 (287)
T 2jl1_A            1 FSIAVT----GATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-----------TLADQGVEVRHGDYNQPESLQKAFA   65 (287)
T ss_dssp             CCEEET----TTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-----------HHHHTTCEEEECCTTCHHHHHHHTT
T ss_pred             CeEEEE----cCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-----------HHhhcCCeEEEeccCCHHHHHHHHh
Confidence            579999    99999999999999999  999999999765432           2223477888887   677888888


Q ss_pred             CCcccEEEeCCCC------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCC
Q 015746          150 GVTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS  223 (401)
Q Consensus       150 ~~~~d~Vv~~a~~------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~  223 (401)
                      +.  |+|||+++.      |+.++.+++++|++.|+++|||+||.++|..+          ..+..+|..+|+++++.++
T Consensus        66 ~~--d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~----------~~y~~~K~~~E~~~~~~~~  133 (287)
T 2jl1_A           66 GV--SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESI----------IPLAHVHLATEYAIRTTNI  133 (287)
T ss_dssp             TC--SEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCC----------STHHHHHHHHHHHHHHTTC
T ss_pred             cC--CEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCC----------CchHHHHHHHHHHHHHcCC
Confidence            74  999999996      78899999999999999999999999987421          1223478888888888899


Q ss_pred             CeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCH
Q 015746          224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  303 (401)
Q Consensus       224 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~  303 (401)
                      +++++||+.++|+....     ++..+...+... .+.+++.++|+|++|+|++++.+++++... |++||+++++.+|+
T Consensus       134 ~~~ilrp~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~i~~~~~~s~  206 (287)
T 2jl1_A          134 PYTFLRNALYTDFFVNE-----GLRASTESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGHE-NKTYNLVSNQPWTF  206 (287)
T ss_dssp             CEEEEEECCBHHHHSSG-----GGHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCT-TEEEEECCSSCBCH
T ss_pred             CeEEEECCEeccccchh-----hHHHHhhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCCC-CcEEEecCCCcCCH
Confidence            99999999988864211     233333323332 344667789999999999999999886543 58999999999999


Q ss_pred             HHHHHHHHHHhCCCceEEecCCCccccccc-ccCCC-------------ccceEeechHHHHHhcCCCCCCCHHHHHHHH
Q 015746          304 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAK-KAFPF-------------RNMHFYAEPRAAKDILGWRSTTNLPEDLKER  369 (401)
Q Consensus       304 ~el~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~  369 (401)
                      .|+++.+.+.+|.+.++..++......... ...|.             ....+..+.+++++.||  |.++++|+|+++
T Consensus       207 ~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~  284 (287)
T 2jl1_A          207 DELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLTPLKETVKQA  284 (287)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHH
Confidence            999999999999998887766432110000 00010             01234567889999999  668999999988


Q ss_pred             HH
Q 015746          370 FE  371 (401)
Q Consensus       370 ~~  371 (401)
                      ++
T Consensus       285 ~~  286 (287)
T 2jl1_A          285 LK  286 (287)
T ss_dssp             HT
T ss_pred             hc
Confidence            75

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.8e-32  Score=256.59  Aligned_cols=263  Identities=16%  Similarity=0.204  Sum_probs=197.2

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +||||    ||+||||++++++|+++  ||+|++++|+.++..           .+...+++++.+|   ++++.+++++
T Consensus         1 ~ilVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~D~~d~~~~~~~~~~   65 (286)
T 2zcu_A            1 MIAIT----GATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-----------ALAAQGITVRQADYGDEAALTSALQG   65 (286)
T ss_dssp             CEEEE----STTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-----------HHHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEE----cCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-----------hhhcCCCeEEEcCCCCHHHHHHHHhC
Confidence            58999    99999999999999999  999999999875432           2223477888887   6778888887


Q ss_pred             CcccEEEeCCCC----ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCeE
Q 015746          151 VTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (401)
Q Consensus       151 ~~~d~Vv~~a~~----~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~~  226 (401)
                      .  |+|||+++.    |+.++.+++++|++.|+++|||+||.++|..          +..+..+|..+|+++++.+++++
T Consensus        66 ~--d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------~~~y~~sK~~~e~~~~~~~~~~~  133 (286)
T 2zcu_A           66 V--EKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS----------PLGLADEHIETEKMLADSGIVYT  133 (286)
T ss_dssp             C--SEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTC----------CSTTHHHHHHHHHHHHHHCSEEE
T ss_pred             C--CEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------cchhHHHHHHHHHHHHHcCCCeE
Confidence            5  999999985    5789999999999999999999999998721          11233478889999988999999


Q ss_pred             EEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHH
Q 015746          227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  306 (401)
Q Consensus       227 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el  306 (401)
                      ++||+.++++..      .++..+..++.+. ++++++.++|+|++|+|++++.+++++... |++||+++++.+|+.|+
T Consensus       134 ilrp~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~i~~~~~~s~~e~  205 (286)
T 2zcu_A          134 LLRNGWYSENYL------ASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHE-GKVYELAGDSAWTLTQL  205 (286)
T ss_dssp             EEEECCBHHHHH------TTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCT-TCEEEECCSSCBCHHHH
T ss_pred             EEeChHHhhhhH------HHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCC-CceEEEeCCCcCCHHHH
Confidence            999987766421      1233444434444 455678899999999999999999886543 58999999999999999


Q ss_pred             HHHHHHHhCCCceEEecCCCccccccc-ccCCC-------------ccceEeechHHHHHhcCCCCCCCHHHHHHHHHHH
Q 015746          307 AKLCAQAAGLPVEIVHYDPKAAGIDAK-KAFPF-------------RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  372 (401)
Q Consensus       307 ~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~  372 (401)
                      ++.+.+.+|.+.++..++......... ...|.             .......+.+++++.|||. .++++|+|+++++|
T Consensus       206 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~e~l~~~~~~  284 (286)
T 2zcu_A          206 AAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHP-TTTLAESVSHLFNV  284 (286)
T ss_dssp             HHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSC-CCCHHHHHHGGGC-
T ss_pred             HHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcC-CCCHHHHHHHHHhh
Confidence            999999999998887766432110000 00110             0112456788999899974 47999999999988


Q ss_pred             HH
Q 015746          373 YV  374 (401)
Q Consensus       373 ~~  374 (401)
                      |.
T Consensus       285 ~~  286 (286)
T 2zcu_A          285 NN  286 (286)
T ss_dssp             --
T ss_pred             cC
Confidence            74

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.98  E-value=9.2e-31  Score=249.15  Aligned_cols=276  Identities=16%  Similarity=0.158  Sum_probs=187.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      +|+||||    ||+||||++++++|+++||+|++++| +.+...+..     .+..+.  ..+++++.+|   .+++.++
T Consensus         1 ~k~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   71 (322)
T 2p4h_X            1 KGRVCVT----GGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-----FLTNLPGASEKLHFFNADLSNPDSFAAA   71 (322)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-----HHHTSTTHHHHEEECCCCTTCGGGGHHH
T ss_pred             CCEEEEE----CChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-----HHHhhhccCCceEEEecCCCCHHHHHHH
Confidence            4789999    99999999999999999999999998 543211100     000010  1134556666   6788888


Q ss_pred             hcCCcccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCCEEEEecccccc-cCC-CCCCCCCCCCCC---
Q 015746          148 VGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAGIY-KPA-DEPPHVEGDVVK---  206 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~---------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy-~~~-~~~~~~E~~~~~---  206 (401)
                      ++++  |+|||+|+.               |+.++.+++++|++. ++++|||+||.+++ +.. ...+++|+++..   
T Consensus        72 ~~~~--d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~  149 (322)
T 2p4h_X           72 IEGC--VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDL  149 (322)
T ss_dssp             HTTC--SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHH
T ss_pred             HcCC--CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhh
Confidence            8875  999999862               467889999999998 78999999998854 332 123456665321   


Q ss_pred             -----CCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcHHHH--HHHHHcCCCcccCCCCcceeeeee
Q 015746          207 -----PDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWF--FDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       207 -----~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                           +....|+..|.+.|         +|++++++||+++||+.........+  +.....+.+.. ++.  ..++|+|
T Consensus       150 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~i~  226 (322)
T 2p4h_X          150 LRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-IGV--TRFHMVH  226 (322)
T ss_dssp             HHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-CCE--EEEEEEE
T ss_pred             hcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-CcC--CCcCEEE
Confidence                 11114655554332         48999999999999997543221111  11224454433 232  3348999


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCc-ccccccccCCCccceEeechHH
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-AGIDAKKAFPFRNMHFYAEPRA  349 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k  349 (401)
                      ++|+|++++.+++++.. .| .|| ++++.+|+.|+++.+.+.++. ..   ++... ...     .+.. ....+|++|
T Consensus       227 v~Dva~a~~~~~~~~~~-~g-~~~-~~~~~~s~~e~~~~i~~~~~~-~~---~~~~~~~~~-----~~~~-~~~~~d~~k  293 (322)
T 2p4h_X          227 VDDVARAHIYLLENSVP-GG-RYN-CSPFIVPIEEMSQLLSAKYPE-YQ---ILTVDELKE-----IKGA-RLPDLNTKK  293 (322)
T ss_dssp             HHHHHHHHHHHHHSCCC-CE-EEE-CCCEEEEHHHHHHHHHHHCTT-SC---CCCTTTTTT-----CCCE-ECCEECCHH
T ss_pred             HHHHHHHHHHHhhCcCC-CC-CEE-EcCCCCCHHHHHHHHHHhCCC-CC---CCCCccccC-----CCCC-cceecccHH
Confidence            99999999999987543 33 588 556789999999999998742 11   11110 000     0111 356789999


Q ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          350 AKDILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       350 ~~~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      + ++|||+|+++++|+|+++++||++++
T Consensus       294 ~-~~lG~~p~~~~~~~l~~~~~~~~~~~  320 (322)
T 2p4h_X          294 L-VDAGFDFKYTIEDMFDDAIQCCKEKG  320 (322)
T ss_dssp             H-HHTTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred             H-HHhCCccCCCHHHHHHHHHHHHHhcC
Confidence            9 56999999999999999999998764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.97  E-value=1.4e-30  Score=242.17  Aligned_cols=252  Identities=19%  Similarity=0.194  Sum_probs=194.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |+||||    ||+||||++++++|++ ||+|++++|+.+..                .++.....|++++.+++++.++|
T Consensus         1 m~ilVt----GatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~~~~Dl~~~~~~~~~~~~~~~d   59 (273)
T 2ggs_A            1 MRTLIT----GASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GGYKLDLTDFPRLEDFIIKKRPD   59 (273)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TCEECCTTSHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CCceeccCCHHHHHHHHHhcCCC
Confidence            589999    9999999999999995 89999999987321                02222222477888888764579


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHH
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~  218 (401)
                      +|||+|+.                |+.++.+++++|++.++ +|||+||.++|+... .++.|+++..+. +.|+..|..
T Consensus        60 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~-~~~~e~~~~~~~-~~Y~~sK~~  136 (273)
T 2ggs_A           60 VIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK-GNYKEEDIPNPI-NYYGLSKLL  136 (273)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS-CSBCTTSCCCCS-SHHHHHHHH
T ss_pred             EEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC-CCcCCCCCCCCC-CHHHHHHHH
Confidence            99999984                45678999999999887 899999999998654 378888776553 667766665


Q ss_pred             HHh---CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEe
Q 015746          219 SEN---FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (401)
Q Consensus       219 ~e~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~  295 (401)
                      .|.   .++++++||+.+||+   ..+...++..+..+.++.++++   .++++|++|+|++++.+++++.  + ++||+
T Consensus       137 ~e~~~~~~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~-g~~~i  207 (273)
T 2ggs_A          137 GETFALQDDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--T-GIIHV  207 (273)
T ss_dssp             HHHHHCCTTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--C-EEEEC
T ss_pred             HHHHHhCCCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--C-CeEEE
Confidence            553   278999999999982   3355566677777887777664   6899999999999999998764  2 59999


Q ss_pred             cCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCC-CCCHHHHH
Q 015746          296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS-TTNLPEDL  366 (401)
Q Consensus       296 ~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p-~~~l~e~l  366 (401)
                      ++ +.+++.|+++.+.+.+|.+.++..... ...     ..+.....+.+|++|++++|||+| .+++++++
T Consensus       208 ~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~-~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          208 AG-ERISRFELALKIKEKFNLPGEVKEVDE-VRG-----WIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             CC-CCEEHHHHHHHHHHHTTCCSCEEEESS-CTT-----CCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             CC-CcccHHHHHHHHHHHhCCChhhccccc-ccc-----cccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            99 999999999999999998876543211 100     112233567789999999999999 67888865

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=5.7e-30  Score=246.68  Aligned_cols=288  Identities=15%  Similarity=0.162  Sum_probs=199.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +.+|+||||    |||||||++|+++|+++||+|++++|+.......    ...+..+...+++++.+|   .+++.+++
T Consensus         8 M~~~~IlVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~----~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~   79 (346)
T 3i6i_A            8 SPKGRVLIA----GATGFIGQFVATASLDAHRPTYILARPGPRSPSK----AKIFKALEDKGAIIVYGLINEQEAMEKIL   79 (346)
T ss_dssp             ---CCEEEE----CTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCeEEEE----CCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhH----HHHHHHHHhCCcEEEEeecCCHHHHHHHH
Confidence            446799999    9999999999999999999999999987332100    001223445689999998   67888899


Q ss_pred             cCCcccEEEeCCCC-ChhhHHHHHHHHHhCC-CCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHHHHHHHHhC
Q 015746          149 GGVTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENF  222 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~-~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~ek~~~e~g  222 (401)
                      +..++|+|||+++. |+.++.+++++|++.| +++||+ |   +||.    +.+|.++..+.    .+|..+|+++++.|
T Consensus        80 ~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g  151 (346)
T 3i6i_A           80 KEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESG  151 (346)
T ss_dssp             HHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTT
T ss_pred             hhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcC
Confidence            84446999999996 8999999999999999 999986 4   4543    23344433332    35677788888889


Q ss_pred             CCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC-CCCC
Q 015746          223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAV  301 (401)
Q Consensus       223 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~-~~~~  301 (401)
                      ++++++||+++||...... .. .......++.+.+++++++.++|+|++|+|++++.+++++...+ ++|++.+ ++.+
T Consensus       152 ~~~tivrpg~~~g~~~~~~-~~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~i~g~~~~~  228 (346)
T 3i6i_A          152 IPFTYICCNSIASWPYYNN-IH-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLN-KSVHFRPSCNCL  228 (346)
T ss_dssp             CCBEEEECCEESSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTT-EEEECCCGGGEE
T ss_pred             CCEEEEEecccccccCccc-cc-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccC-eEEEEeCCCCCC
Confidence            9999999999999754321 11 11122255667889999999999999999999999999886544 8899886 4899


Q ss_pred             CHHHHHHHHHHHhCCCceEEecCCCccccccc-ccCCC------------ccc--eEee---chHHHHHh-cCCCCCCCH
Q 015746          302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK-KAFPF------------RNM--HFYA---EPRAAKDI-LGWRSTTNL  362 (401)
Q Consensus       302 t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~------------~~~--~~~~---~~~k~~~~-lG~~p~~~l  362 (401)
                      |+.|+++.+.+.+|.+.++..++......... ..+|.            ...  .+.+   +..++.+. -++++ +++
T Consensus       229 s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~-t~~  307 (346)
T 3i6i_A          229 NINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSF-RTV  307 (346)
T ss_dssp             CHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCC-CCH
T ss_pred             CHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCc-CcH
Confidence            99999999999999998887766543211110 00110            000  0111   00112222 24556 589


Q ss_pred             HHHHHHHHHHHHHhcCC
Q 015746          363 PEDLKERFEEYVKIGRD  379 (401)
Q Consensus       363 ~e~l~~~~~~~~~~~~~  379 (401)
                      +|.++++++||.++.+.
T Consensus       308 ~e~l~~~~~~~~~~~~~  324 (346)
T 3i6i_A          308 EECFGEYIVKMEEKQPT  324 (346)
T ss_dssp             HHHHHHHHCC-------
T ss_pred             HHHHHHHHHHhhccccc
Confidence            99999999999987543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.7e-29  Score=237.01  Aligned_cols=258  Identities=14%  Similarity=0.125  Sum_probs=191.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      |+||||    ||||+||++++++|+++ |++|++++|+.++...           +...+++++.+|   ++++.+++++
T Consensus         1 M~ilVt----GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----------~~~~~v~~~~~D~~d~~~l~~~~~~   65 (289)
T 3e48_A            1 MNIMLT----GATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----------DWRGKVSVRQLDYFNQESMVEAFKG   65 (289)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----------GGBTTBEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEEE----cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----------hhhCCCEEEEcCCCCHHHHHHHHhC
Confidence            689999    99999999999999998 9999999998865432           233578888888   7788888887


Q ss_pred             CcccEEEeCCCC------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCC
Q 015746          151 VTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (401)
Q Consensus       151 ~~~d~Vv~~a~~------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~  224 (401)
                      .  |+|||+++.      |+.++.+++++|++.|+++|||+||.+.   ....++.      ........|+.+.+.+++
T Consensus        66 ~--d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~~~~~------~~~~~~~~e~~~~~~g~~  134 (289)
T 3e48_A           66 M--DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHNNPFH------MSPYFGYASRLLSTSGID  134 (289)
T ss_dssp             C--SEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---STTCCST------THHHHHHHHHHHHHHCCE
T ss_pred             C--CEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCCCCCc------cchhHHHHHHHHHHcCCC
Confidence            5  999999995      4688999999999999999999999542   2111211      111223567788889999


Q ss_pred             eEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHH
Q 015746          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (401)
Q Consensus       225 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~  304 (401)
                      ++++||+++||+.     .. ++..+..+.. ..++.+++.++|++++|+|++++.++.++... |++||++ ++.+|+.
T Consensus       135 ~~ilrp~~~~~~~-----~~-~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~-~~~~s~~  205 (289)
T 3e48_A          135 YTYVRMAMYMDPL-----KP-YLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTW-GKRYLLS-GYSYDMK  205 (289)
T ss_dssp             EEEEEECEESTTH-----HH-HHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT-TCEEEEC-CEEEEHH
T ss_pred             EEEEecccccccc-----HH-HHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcC-CceEEeC-CCcCCHH
Confidence            9999999999972     22 3344444333 34456788899999999999999999988765 5899999 9999999


Q ss_pred             HHHHHHHHHhCCCceEEecCCCcccccccc--cCC---------CccceEeechHHHHHhcCCCCCCCHHHHHHH
Q 015746          305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKK--AFP---------FRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  368 (401)
Q Consensus       305 el~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~  368 (401)
                      |+++.+.+.+|++.++..++..........  .++         ............+++.+|++|+ +++|.+++
T Consensus       206 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~  279 (289)
T 3e48_A          206 ELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ-TLQSFLQE  279 (289)
T ss_dssp             HHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC-CHHHHHHC
T ss_pred             HHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC-CHHHHHHH
Confidence            999999999999988766654321111000  000         0011222344566777898884 88877665

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=1.2e-28  Score=244.24  Aligned_cols=294  Identities=13%  Similarity=0.133  Sum_probs=203.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC--CCc-----ccchhcCCCeEEEcCHhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--FNR-----FNEIVSAGGKTVWGDPAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~-----~~~l~~~~~~~~~~D~~~~  144 (401)
                      ..+|+||||    |||||||++++++|+++|++|++++|+...........  ...     +......++.++.+|..+.
T Consensus        67 ~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           67 RPLGNTLLT----GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             CCCEEEEEE----CTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             CCCCEEEEe----cCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            446799999    99999999999999999999999999886221100000  000     0112235788999984332


Q ss_pred             HHhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccC-----CCCCCCCCCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-----ADEPPHVEGDVVK  206 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~-----~~~~~~~E~~~~~  206 (401)
                      ..+-...++|+|||+|+.             |+.++.+++++|++ ++++|||+||.++ |.     ....+++|+++..
T Consensus       143 ~~l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~  220 (427)
T 4f6c_A          143 DDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK  220 (427)
T ss_dssp             CCCCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS
T ss_pred             ccCCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccccc
Confidence            222122347999999984             68899999999999 7789999999999 53     2345677877632


Q ss_pred             C--CCChHHHHHH-----HHH---hCCCeEEEecCeeecCCCCCC--------cHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          207 P--DAGHVQVEKY-----ISE---NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       207 ~--~~~~~~~ek~-----~~e---~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                      +  ..+.|+..|+     +.+   .|++++++||++|||+.....        .+..++..+..+++++. +.++..++|
T Consensus       221 ~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  299 (427)
T 4f6c_A          221 GQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDF  299 (427)
T ss_dssp             SCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEE
Confidence            1  2355555554     444   489999999999999976542        35567777777777665 345678999


Q ss_pred             eeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccc---cccC-----CCcc
Q 015746          269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA---KKAF-----PFRN  340 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~---~~~~-----~~~~  340 (401)
                      ++++|+|++++.++..+.  .+++||+++++++++.|+++.+.+ +|  .+....+........   .+..     ....
T Consensus       300 v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  374 (427)
T 4f6c_A          300 SFVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLTSVDREQ  374 (427)
T ss_dssp             EEHHHHHHHHHHHTTSCC--CCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHHHHHHTS
T ss_pred             eeHHHHHHHHHHHHcCCC--CCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhhhccccC
Confidence            999999999999999877  369999999999999999999998 66  333322221110000   0000     0011


Q ss_pred             ceEeechHHHH---HhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          341 MHFYAEPRAAK---DILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       341 ~~~~~~~~k~~---~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      ....+|..+..   +.+||.++..-++.++++++++++..
T Consensus       375 ~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~  414 (427)
T 4f6c_A          375 QLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIF  414 (427)
T ss_dssp             EECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHH
Confidence            24556666554   45799887655779999999888763

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=1.4e-29  Score=246.01  Aligned_cols=233  Identities=15%  Similarity=0.129  Sum_probs=186.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      |+||||    |||||||++++++|+++|+ +|++++|+                           .|++++.+++++  +
T Consensus         1 M~VlVt----GatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~--~   47 (369)
T 3st7_A            1 MNIVIT----GAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLK--A   47 (369)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHH--C
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhcc--C
Confidence            689999    9999999999999999999 99988875                           267888888886  5


Q ss_pred             cEEEeCCCC------------ChhhHHHHHHHHHhCCCC-EEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 015746          154 DVVLDNNGK------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (401)
Q Consensus       154 d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e  220 (401)
                      |+|||+|+.            |+.++.+++++|++.+++ +|||+||.++|+..           .+..+|..+|+++.+
T Consensus        48 d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~-----------~Y~~sK~~~E~~~~~  116 (369)
T 3st7_A           48 DFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDN-----------PYGESKLQGEQLLRE  116 (369)
T ss_dssp             SEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCS-----------HHHHHHHHHHHHHHH
T ss_pred             CEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCC-----------CchHHHHHHHHHHHH
Confidence            999999983            788999999999999987 99999999999711           122366677777766


Q ss_pred             ----hCCCeEEEecCeeecCCCCC---CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEE
Q 015746          221 ----NFSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  293 (401)
Q Consensus       221 ----~g~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~  293 (401)
                          .+++++++||+++||++...   .++..++..+..+.++.+ +++++.++|+|++|+|++++.+++++....+++|
T Consensus       117 ~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  195 (369)
T 3st7_A          117 YAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVP  195 (369)
T ss_dssp             HHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEE
T ss_pred             HHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceE
Confidence                59999999999999997654   477788888888888776 4678899999999999999999998876434899


Q ss_pred             EecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHH
Q 015746          294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  368 (401)
Q Consensus       294 ~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~  368 (401)
                      |+++++.+|+.|+++.+.+.+|.+..+.. ++....               ..-......+||.|...++++++.
T Consensus       196 ~i~~~~~~s~~e~~~~~~~~~g~~~~~~~-~~~~~~---------------~~~~l~~~~l~~~p~~~~~~~l~~  254 (369)
T 3st7_A          196 TVPNVFKVTLGEIVDLLYKFKQSRLDRTL-PKLDNL---------------FEKDLYSTYLSYLPSTDFSYPLLM  254 (369)
T ss_dssp             CCSCCEEEEHHHHHHHHHHHHHHHHHTCC-CCTTSH---------------HHHHHHHHHHHTSCTTCSCCCCCE
T ss_pred             EeCCCCceeHHHHHHHHHHHhCCCccccc-CCCCCH---------------HHHHHHHHHhcccCCcceeechhh
Confidence            99999999999999999999987654322 111100               111233445899998776665543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=4.1e-29  Score=252.95  Aligned_cols=293  Identities=13%  Similarity=0.128  Sum_probs=203.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC--CC-----cccchhcCCCeEEEcCHhhHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--FN-----RFNEIVSAGGKTVWGDPAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~-----~~~~l~~~~~~~~~~D~~~~~  145 (401)
                      .+|+||||    |||||||++|+++|+++|++|++++|+..+........  ..     .+......+++++.+|..+..
T Consensus       149 ~~~~VLVT----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  224 (508)
T 4f6l_B          149 PLGNTLLT----GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  224 (508)
T ss_dssp             CCEEEEES----CTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCS
T ss_pred             CCCeEEEE----CCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccc
Confidence            46899999    99999999999999999999999999886321100000  00     001122357899999843322


Q ss_pred             HhhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccC-----CCCCCCCCCCCCCC
Q 015746          146 NVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-----ADEPPHVEGDVVKP  207 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~-----~~~~~~~E~~~~~~  207 (401)
                      .+-...++|+|||+|+.             |+.++.+++++|++ +.++|||+||.++ |.     ....+++|+++..+
T Consensus       225 ~l~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~  302 (508)
T 4f6l_B          225 DVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKG  302 (508)
T ss_dssp             SCCCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSS
T ss_pred             cCCCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccccccccccc
Confidence            21122347999999984             78899999999998 6789999999999 43     23456777776321


Q ss_pred             --CCChHHHHH-----HHHH---hCCCeEEEecCeeecCCCCCC--------cHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          208 --DAGHVQVEK-----YISE---NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       208 --~~~~~~~ek-----~~~e---~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                        ..+.|+..|     ++.+   .|++++++||++|||+.....        .+..++..+..++.++. +++++.++|+
T Consensus       303 ~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v  381 (508)
T 4f6l_B          303 QLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFS  381 (508)
T ss_dssp             BCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECE
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEE
Confidence              235555544     4444   489999999999999976442        25566777777776655 4467889999


Q ss_pred             eHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccc---cccC-----CCccc
Q 015746          270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA---KKAF-----PFRNM  341 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~---~~~~-----~~~~~  341 (401)
                      |++|+|++++.++.++.  .+++||+++++.+++.|+++.+.+..   .+....+.+......   .+..     .....
T Consensus       382 ~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~  456 (508)
T 4f6l_B          382 FVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLTSVDREQQ  456 (508)
T ss_dssp             EHHHHHHHHHHHTTBCC--SCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSE
T ss_pred             cHHHHHHHHHHHHhCCC--CCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhcccccccCc
Confidence            99999999999998877  35899999999999999999999865   333322221110000   0000     00113


Q ss_pred             eEeechHHHH---HhcCCCCCCCHHHHHHHHHHHHHHhc
Q 015746          342 HFYAEPRAAK---DILGWRSTTNLPEDLKERFEEYVKIG  377 (401)
Q Consensus       342 ~~~~~~~k~~---~~lG~~p~~~l~e~l~~~~~~~~~~~  377 (401)
                      ...+|+.+..   +.+||.++..-++.++++++++++.-
T Consensus       457 ~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~  495 (508)
T 4f6l_B          457 LAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIF  495 (508)
T ss_dssp             ECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH
Confidence            4556666544   45799987666889999999988763

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=8.5e-28  Score=217.31  Aligned_cols=202  Identities=21%  Similarity=0.220  Sum_probs=154.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+||||    ||+||||++++++|+++|++|++++|+.++...+.            .+++++.+|   .+++.+++++
T Consensus         4 m~~ilIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~Dl~d~~~~~~~~~~   67 (227)
T 3dhn_A            4 VKKIVLI----GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN------------EHLKVKKADVSSLDEVCEVCKG   67 (227)
T ss_dssp             CCEEEEE----TCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC------------TTEEEECCCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc------------CceEEEEecCCCHHHHHHHhcC
Confidence            5899999    99999999999999999999999999886543321            367777787   7788888987


Q ss_pred             CcccEEEeCCCC----------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 015746          151 VTFDVVLDNNGK----------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (401)
Q Consensus       151 ~~~d~Vv~~a~~----------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e  220 (401)
                        +|+|||+++.          |+.++.+++++|++.++++|||+||.++|...... ..|+.+..+ .+.|+..|...|
T Consensus        68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p-~~~Y~~sK~~~e  143 (227)
T 3dhn_A           68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVP-ENILPGVKALGE  143 (227)
T ss_dssp             --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSC-GGGHHHHHHHHH
T ss_pred             --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcch-HHHHHHHHHHHH
Confidence              4999999985          58899999999999999999999999987654322 233333333 255665555444


Q ss_pred             ---------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCc
Q 015746          221 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  291 (401)
Q Consensus       221 ---------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~  291 (401)
                               .+++++++||+++||++.....       ...+....+.. ++. ++|+|++|+|++++.+++++...+ +
T Consensus       144 ~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~-------~~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g-~  213 (227)
T 3dhn_A          144 FYLNFLMKEKEIDWVFFSPAADMRPGVRTGR-------YRLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQ-E  213 (227)
T ss_dssp             HHHHTGGGCCSSEEEEEECCSEEESCCCCCC-------CEEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCS-E
T ss_pred             HHHHHHhhccCccEEEEeCCcccCCCccccc-------eeecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccC-c
Confidence                     3889999999999999765431       11233333332 222 899999999999999999988665 9


Q ss_pred             EEEecCCCCCCHHH
Q 015746          292 IFNLVSDRAVTLDG  305 (401)
Q Consensus       292 ~~~~~~~~~~t~~e  305 (401)
                      +|+++++++.++++
T Consensus       214 ~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          214 RFTIGYLEHHHHHH  227 (227)
T ss_dssp             EEEEECCSCCC---
T ss_pred             EEEEEeehhcccCC
Confidence            99999999888763

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.95  E-value=2.1e-27  Score=238.54  Aligned_cols=244  Identities=16%  Similarity=0.239  Sum_probs=178.7

Q ss_pred             cccccCeEEEEecCCCccccchHHHHHHHHhC---CCeEEEEecCCCCcccCCC------CC----CCcccchhcCCCeE
Q 015746           70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS---GHEVTIMTVGDENSDKMKK------PP----FNRFNEIVSAGGKT  136 (401)
Q Consensus        70 ~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~---g~~V~~~~r~~~~~~~~~~------~~----~~~~~~l~~~~~~~  136 (401)
                      ....+|+||||    |||||||++++++|+++   |++|++++|+.........      ..    ...+......++++
T Consensus        69 ~~~~~~~VLVT----GatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~  144 (478)
T 4dqv_A           69 PSPELRTVLLT----GATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEV  144 (478)
T ss_dssp             CCSCCCEEEEE----CTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEE
T ss_pred             CCCCCCEEEEE----CCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEE
Confidence            34568999999    99999999999999999   9999999998754311100      00    00011222357888


Q ss_pred             EEcCH---------hhHHHhhcCCcccEEEeCCCC------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC
Q 015746          137 VWGDP---------AEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       137 ~~~D~---------~~~~~~~~~~~~d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~  195 (401)
                      +.+|.         +.+..++++  +|+|||+|+.            |+.++.+++++|++.++++|||+||.++|+...
T Consensus       145 v~~Dl~~~~~gld~~~~~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~  222 (478)
T 4dqv_A          145 VAGDKSEPDLGLDQPMWRRLAET--VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIE  222 (478)
T ss_dssp             EECCTTSGGGGCCHHHHHHHHHH--CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSC
T ss_pred             EEeECCCcccCCCHHHHHHHHcC--CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccC
Confidence            88884         467777775  5999999984            688999999999999999999999999999877


Q ss_pred             CCCCCCCCCCCC---------------CCChHHHHHHHHH----hCCCeEEEecCeeecCCCC------CCcHHHHHHHH
Q 015746          196 EPPHVEGDVVKP---------------DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN------KDCEEWFFDRI  250 (401)
Q Consensus       196 ~~~~~E~~~~~~---------------~~~~~~~ek~~~e----~g~~~~ilRp~~v~G~~~~------~~~~~~~~~~~  250 (401)
                      ..++.|+.+..+               ..+|+.+|+++.+    .+++++++||++|||+...      ..++..++...
T Consensus       223 ~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~  302 (478)
T 4dqv_A          223 PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL  302 (478)
T ss_dssp             TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred             CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence            777888765322               2234445555544    3899999999999998541      12444445444


Q ss_pred             HcCCCcc--cCC---C---CcceeeeeeHHHHHHHHHHHhcC----CCcCCCcEEEecCCCC--CCHHHHHHHHHHHhCC
Q 015746          251 VRKRPVP--IPG---S---GMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRA--VTLDGMAKLCAQAAGL  316 (401)
Q Consensus       251 ~~~~~~~--~~~---~---~~~~~~~v~v~D~a~~~~~~~~~----~~~~~g~~~~~~~~~~--~t~~el~~~i~~~~g~  316 (401)
                      ...+..+  +++   +   +++.++|+|++|+|++++.++.+    +... +++||+++++.  ++++|+++.+.+. |.
T Consensus       303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~-~~~ynv~~~~~~~~s~~el~~~l~~~-g~  380 (478)
T 4dqv_A          303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAG-FATYHVMNPHDDGIGLDEYVDWLIEA-GY  380 (478)
T ss_dssp             HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCS-EEEEEESCCCCSSCSHHHHHHHHHHT-TC
T ss_pred             HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCC-CceEEecCCCCCCcCHHHHHHHHHHc-CC
Confidence            4433222  221   1   25789999999999999999986    3322 58999999988  9999999999995 77


Q ss_pred             CceEE
Q 015746          317 PVEIV  321 (401)
Q Consensus       317 ~~~~~  321 (401)
                      +.+..
T Consensus       381 ~~~~i  385 (478)
T 4dqv_A          381 PIRRI  385 (478)
T ss_dssp             SCEEE
T ss_pred             CcccC
Confidence            76654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.95  E-value=1.3e-28  Score=232.11  Aligned_cols=227  Identities=19%  Similarity=0.191  Sum_probs=172.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +|+||||    ||||+||++++++|+++| ++|++++|++++..         ...+...+++++.+|   ++++.++++
T Consensus         5 ~~~ilVt----GatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~---------~~~l~~~~~~~~~~D~~d~~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVF----GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA---------AKELRLQGAEVVQGDQDDQVIMELALN   71 (299)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH---------HHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH---------HHHHHHCCCEEEEecCCCHHHHHHHHh
Confidence            4789999    999999999999999999 99999999875431         112333578888887   678888898


Q ss_pred             CCcccEEEeCCCC--------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHh
Q 015746          150 GVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~  221 (401)
                      +.  |+|||+++.        ++.++.+++++|++.|+++||++|+.++|+.....+     ...+..+|..+|+++++.
T Consensus        72 ~~--d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~-----~~~y~~sK~~~e~~~~~~  144 (299)
T 2wm3_A           72 GA--YATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRL-----AAAHFDGKGEVEEYFRDI  144 (299)
T ss_dssp             TC--SEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSC-----CCHHHHHHHHHHHHHHHH
T ss_pred             cC--CEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcc-----cCchhhHHHHHHHHHHHC
Confidence            75  999999983        356889999999999999999999988886432110     011123567788888888


Q ss_pred             CCCeEEEecCeeecCCCCCCcHHHHHHHH-HcCCCc-ccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          222 FSNWASFRPQYMIGSGNNKDCEEWFFDRI-VRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       222 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      |+++++|||+++||+....     ++... ..++.. .....++..++|+|++|+|++++.++.++....|++|++++ +
T Consensus       145 gi~~~ilrp~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~  218 (299)
T 2wm3_A          145 GVPMTSVRLPCYFENLLSH-----FLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-C  218 (299)
T ss_dssp             TCCEEEEECCEEGGGGGTT-----TCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-E
T ss_pred             CCCEEEEeecHHhhhchhh-----cCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-c
Confidence            9999999999999974221     11111 123221 11233667899999999999999999875422358999986 5


Q ss_pred             CCCHHHHHHHHHHHhCCCceEEecCCC
Q 015746          300 AVTLDGMAKLCAQAAGLPVEIVHYDPK  326 (401)
Q Consensus       300 ~~t~~el~~~i~~~~g~~~~~~~~~~~  326 (401)
                      .+|+.|+++.+.+.+|++..+..++..
T Consensus       219 ~~s~~e~~~~~~~~~g~~~~~~~~~~~  245 (299)
T 2wm3_A          219 RHTAEEYAALLTKHTRKVVHDAKMTPE  245 (299)
T ss_dssp             EECHHHHHHHHHHHHSSCEEECCCCTH
T ss_pred             cCCHHHHHHHHHHHHCCCceeEecCHH
Confidence            799999999999999999887666544

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=2.4e-26  Score=221.30  Aligned_cols=214  Identities=15%  Similarity=0.224  Sum_probs=168.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhC-CC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||||+||++++++|+++ |+ +|++++|+..+...+.       ..+...+++++.+|   .+.+.+
T Consensus        19 ~~~k~vlVT----GatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~-------~~~~~~~v~~~~~Dl~d~~~l~~   87 (344)
T 2gn4_A           19 LDNQTILIT----GGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA-------MEFNDPRMRFFIGDVRDLERLNY   87 (344)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH-------HHHCCTTEEEEECCTTCHHHHHH
T ss_pred             hCCCEEEEE----CCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH-------HHhcCCCEEEEECCCCCHHHHHH
Confidence            346899999    99999999999999999 97 9999999865432111       11112467888888   677778


Q ss_pred             hhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      ++++  +|+|||+|+.                |+.++.+++++|++.++++||++||..++.+.          ..+..+
T Consensus        88 ~~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~----------~~Y~~s  155 (344)
T 2gn4_A           88 ALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPI----------NLYGAT  155 (344)
T ss_dssp             HTTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCC----------SHHHHH
T ss_pred             HHhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCc----------cHHHHH
Confidence            8876  5999999984                56788999999999999999999998775321          011234


Q ss_pred             hHHHHHHHHHh-------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCC-CcccCCCCcceeeeeeHHHHHHHHHHHh
Q 015746          211 HVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (401)
Q Consensus       211 ~~~~ek~~~e~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a~~~~~~~  282 (401)
                      |.++|+++...       +++++++||++|||++.  ..++.++..+..++ ++.+. ++...++|+|++|+|++++.++
T Consensus       156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~--~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l  232 (344)
T 2gn4_A          156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG--SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSL  232 (344)
T ss_dssp             HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT--SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC--CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHH
Confidence            55566665542       58999999999999874  36777788888888 77765 5778899999999999999999


Q ss_pred             cCCCcCCCcEEEecCCCCCCHHHHHHHHHHHh
Q 015746          283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (401)
Q Consensus       283 ~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~  314 (401)
                      ++...  |++|++.++ .+++.|+++.+.+.+
T Consensus       233 ~~~~~--g~~~~~~~~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          233 KRMHG--GEIFVPKIP-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHCCS--SCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred             hhccC--CCEEecCCC-cEEHHHHHHHHHHhC
Confidence            87643  689998876 599999999998754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.94  E-value=4.8e-27  Score=222.63  Aligned_cols=231  Identities=15%  Similarity=0.202  Sum_probs=173.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +|+||||    ||||+||++++++|+++|++|++++|+.......+   ...+..+...+++++.+|   ++++.+++++
T Consensus         4 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~   76 (313)
T 1qyd_A            4 KSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK---VQMLLYFKQLGAKLIEASLDDHQRLVDALKQ   76 (313)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH---HHHHHHHHTTTCEEECCCSSCHHHHHHHHTT
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH---HHHHHHHHhCCeEEEeCCCCCHHHHHHHHhC
Confidence            5789999    99999999999999999999999999864321000   001112234578888887   7788899987


Q ss_pred             CcccEEEeCCCC-----ChhhHHHHHHHHHhCC-CCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHHHHHHHH
Q 015746          151 VTFDVVLDNNGK-----NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISE  220 (401)
Q Consensus       151 ~~~d~Vv~~a~~-----~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~ek~~~e  220 (401)
                      +  |+|||+++.     |+.++.+++++|++.| ++|||+ |   +|+......   ..+..+.    .+|..+|+++++
T Consensus        77 ~--d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~  147 (313)
T 1qyd_A           77 V--DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEA  147 (313)
T ss_dssp             C--SEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHH
T ss_pred             C--CEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHh
Confidence            5  999999985     6889999999999999 999996 4   455322111   1111111    357778888888


Q ss_pred             hCCCeEEEecCeeecCCCCCCcHHHHHHH----HHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEec
Q 015746          221 NFSNWASFRPQYMIGSGNNKDCEEWFFDR----IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (401)
Q Consensus       221 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~  296 (401)
                      .+++++++||+.++|.....     +...    ...++.+.++++++..++++|++|+|++++.+++++... +++|++.
T Consensus       148 ~g~~~~ilrp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~  221 (313)
T 1qyd_A          148 ASIPYTYVSSNMFAGYFAGS-----LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL-NKTMYIR  221 (313)
T ss_dssp             TTCCBCEEECCEEHHHHTTT-----SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGS-SSEEECC
T ss_pred             cCCCeEEEEeceeccccccc-----cccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccC-CceEEEe
Confidence            89999999999998852211     1111    123445667788889999999999999999999987544 4788887


Q ss_pred             CC-CCCCHHHHHHHHHHHhCCCceEEecCCC
Q 015746          297 SD-RAVTLDGMAKLCAQAAGLPVEIVHYDPK  326 (401)
Q Consensus       297 ~~-~~~t~~el~~~i~~~~g~~~~~~~~~~~  326 (401)
                      ++ +.+|+.|+++.+.+.+|++.++..++..
T Consensus       222 g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~  252 (313)
T 1qyd_A          222 PPMNILSQKEVIQIWERLSEQNLDKIYISSQ  252 (313)
T ss_dssp             CGGGEEEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred             CCCCccCHHHHHHHHHHhcCCCCceEECCHH
Confidence            65 7899999999999999999888776643

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=6.4e-27  Score=213.09  Aligned_cols=204  Identities=17%  Similarity=0.270  Sum_probs=155.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcCH-hhHHHhh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDP-AEVGNVV  148 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~-~~~~~~~  148 (401)
                      ..++|+||||    ||+|+||++++++|+++||+|++++|+.++..           .+...++ +++.+|. +++.+++
T Consensus        18 ~l~~~~ilVt----GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~-----------~~~~~~~~~~~~~Dl~~~~~~~~   82 (236)
T 3e8x_A           18 YFQGMRVLVV----GANGKVARYLLSELKNKGHEPVAMVRNEEQGP-----------ELRERGASDIVVANLEEDFSHAF   82 (236)
T ss_dssp             ---CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-----------HHHHTTCSEEEECCTTSCCGGGG
T ss_pred             CcCCCeEEEE----CCCChHHHHHHHHHHhCCCeEEEEECChHHHH-----------HHHhCCCceEEEcccHHHHHHHH
Confidence            3457899999    99999999999999999999999999876442           2333478 8899995 5566666


Q ss_pred             cCCcccEEEeCCCC------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHH
Q 015746          149 GGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek  216 (401)
                      .+  +|+|||+++.            |+.++.+++++|++.++++||++||.+.+....    .+.....+..+|.++|+
T Consensus        83 ~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~----~~~~~~~Y~~sK~~~e~  156 (236)
T 3e8x_A           83 AS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQ----GPMNMRHYLVAKRLADD  156 (236)
T ss_dssp             TT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGG----SCGGGHHHHHHHHHHHH
T ss_pred             cC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCC----ChhhhhhHHHHHHHHHH
Confidence            65  5999999994            788999999999999999999999966543211    00000111235666777


Q ss_pred             HHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEec
Q 015746          217 YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (401)
Q Consensus       217 ~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~  296 (401)
                      ++++.++++++|||+++||+.....              +....++...+++++++|+|++++.+++++... |++|+++
T Consensus       157 ~~~~~gi~~~~lrpg~v~~~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~v~  221 (236)
T 3e8x_A          157 ELKRSSLDYTIVRPGPLSNEESTGK--------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTI-GKTFEVL  221 (236)
T ss_dssp             HHHHSSSEEEEEEECSEECSCCCSE--------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGT-TEEEEEE
T ss_pred             HHHHCCCCEEEEeCCcccCCCCCCe--------------EEeccCCCcccCcEeHHHHHHHHHHHhcCcccc-CCeEEEe
Confidence            7777899999999999999864331              222234445688999999999999999987643 5999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 015746          297 SDRAVTLDGMAKLCA  311 (401)
Q Consensus       297 ~~~~~t~~el~~~i~  311 (401)
                      ++ .++++|+++.++
T Consensus       222 ~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          222 NG-DTPIAKVVEQLG  235 (236)
T ss_dssp             EC-SEEHHHHHHTC-
T ss_pred             CC-CcCHHHHHHHhc
Confidence            88 599999998765

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.94  E-value=4e-26  Score=211.72  Aligned_cols=212  Identities=17%  Similarity=0.147  Sum_probs=162.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+||||    ||+||||++++++|+++|++|++++|+..+...              .+++++.+|   ++.+.+++++
T Consensus         2 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~   63 (267)
T 3ay3_A            2 LNRLLVT----GAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE--------------AHEEIVACDLADAQAVHDLVKD   63 (267)
T ss_dssp             EEEEEEE----STTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC--------------TTEEECCCCTTCHHHHHHHHTT
T ss_pred             CceEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC--------------CCccEEEccCCCHHHHHHHHcC
Confidence            5789999    999999999999999999999999998753210              245566666   6778888886


Q ss_pred             CcccEEEeCCCC------------ChhhHHHHHHHHHhCCCCEEEEecccccccCC-CCCCCCCCCCCCCCCChHHHHH-
Q 015746          151 VTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEK-  216 (401)
Q Consensus       151 ~~~d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~-~~~~~~E~~~~~~~~~~~~~ek-  216 (401)
                        +|+|||+++.            |+.++.+++++|++.++++|||+||..+|+.. ...+++|+++..+. +.|+..| 
T Consensus        64 --~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~  140 (267)
T 3ay3_A           64 --CDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD-SLYGLSKC  140 (267)
T ss_dssp             --CSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC-SHHHHHHH
T ss_pred             --CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC-ChHHHHHH
Confidence              5999999984            67889999999999999999999999999864 34678888877654 5565544 


Q ss_pred             ----HHH----HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcC
Q 015746          217 ----YIS----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (401)
Q Consensus       217 ----~~~----e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~  288 (401)
                          ++.    +.+++++++||+++|+...                      ++...++|+|++|+|++++.+++++...
T Consensus       141 ~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~  198 (267)
T 3ay3_A          141 FGEDLASLYYHKFDIETLNIRIGSCFPKPK----------------------DARMMATWLSVDDFMRLMKRAFVAPKLG  198 (267)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEEECBCSSSCC----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEeceeecCCCC----------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence                333    2489999999999984210                      1234578899999999999999987542


Q ss_pred             CCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHH
Q 015746          289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  368 (401)
Q Consensus       289 ~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~  368 (401)
                       +++|++.++..                                         ....|..++ +.|||+|.+++++++++
T Consensus       199 -~~~~~~~~~~~-----------------------------------------~~~~d~~~~-~~lg~~p~~~~~~~~~~  235 (267)
T 3ay3_A          199 -CTVVYGASANT-----------------------------------------ESWWDNDKS-AFLGWVPQDSSEIWREE  235 (267)
T ss_dssp             -EEEEEECCSCS-----------------------------------------SCCBCCGGG-GGGCCCCCCCGGGGHHH
T ss_pred             -ceeEecCCCcc-----------------------------------------ccccCHHHH-HHcCCCCCCCHHHHHHH
Confidence             26777764321                                         011355666 77999999999999988


Q ss_pred             HHH
Q 015746          369 RFE  371 (401)
Q Consensus       369 ~~~  371 (401)
                      +.+
T Consensus       236 ~~~  238 (267)
T 3ay3_A          236 IEQ  238 (267)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=2.2e-26  Score=207.12  Aligned_cols=193  Identities=15%  Similarity=0.219  Sum_probs=152.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----HhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~~~~~~~~  150 (401)
                      |+||||    ||+|+||++++++|+++|++|++++|+.++....             .+++++.+|    ++++.+++++
T Consensus         1 M~ilIt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~   63 (219)
T 3dqp_A            1 MKIFIV----GSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------------NNVKAVHFDVDWTPEEMAKQLHG   63 (219)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------------TTEEEEECCTTSCHHHHHTTTTT
T ss_pred             CeEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------------CCceEEEecccCCHHHHHHHHcC
Confidence            589999    9999999999999999999999999998654321             367788887    4457777776


Q ss_pred             CcccEEEeCCCC--------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCC----CCChHHHHHHH
Q 015746          151 VTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYI  218 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~----~~~~~~~ek~~  218 (401)
                        +|+|||+++.        |+.++.+++++|++.++++||++||.++++..   ++.| .+..+    ..+|..+|+++
T Consensus        64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~  137 (219)
T 3dqp_A           64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYL  137 (219)
T ss_dssp             --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHH
T ss_pred             --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHH
Confidence              5999999994        78999999999999999999999998877542   3333 21111    13566677777


Q ss_pred             -HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC
Q 015746          219 -SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (401)
Q Consensus       219 -~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~  297 (401)
                       .+.++++++|||+++||+.....+              . .  +...+++++++|+|++++.+++++... |++||+++
T Consensus       138 ~~~~~i~~~ilrp~~v~g~~~~~~~--------------~-~--~~~~~~~i~~~Dva~~i~~~l~~~~~~-g~~~~i~~  199 (219)
T 3dqp_A          138 TKETNLDYTIIQPGALTEEEATGLI--------------D-I--NDEVSASNTIGDVADTIKELVMTDHSI-GKVISMHN  199 (219)
T ss_dssp             HHSCCCEEEEEEECSEECSCCCSEE--------------E-E--SSSCCCCEEHHHHHHHHHHHHTCGGGT-TEEEEEEE
T ss_pred             HhccCCcEEEEeCceEecCCCCCcc--------------c-c--CCCcCCcccHHHHHHHHHHHHhCcccc-CcEEEeCC
Confidence             667999999999999998654321              1 1  246689999999999999999987654 58999988


Q ss_pred             CCCCCHHHHHHH
Q 015746          298 DRAVTLDGMAKL  309 (401)
Q Consensus       298 ~~~~t~~el~~~  309 (401)
                      ++ .+++|++..
T Consensus       200 g~-~~~~e~~~~  210 (219)
T 3dqp_A          200 GK-TAIKEALES  210 (219)
T ss_dssp             CS-EEHHHHHHT
T ss_pred             CC-ccHHHHHHH
Confidence            75 899998764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.93  E-value=2.6e-26  Score=218.36  Aligned_cols=226  Identities=18%  Similarity=0.221  Sum_probs=173.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||||+||++++++|+++||+|++++|+......       .+..+...+++++.+|   ++++.+++++
T Consensus        11 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~   79 (318)
T 2r6j_A           11 KSKILIF----GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTT-------LLDEFQSLGAIIVKGELDEHEKLVELMKK   79 (318)
T ss_dssp             CCCEEEE----TTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHH-------HHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred             CCeEEEE----CCCchHHHHHHHHHHHCCCcEEEEECCCCchhh-------HHHHhhcCCCEEEEecCCCHHHHHHHHcC
Confidence            4589999    999999999999999999999999998742110       1122334578899888   6788889987


Q ss_pred             CcccEEEeCCCCC-hhhHHHHHHHHHhCC-CCEEEEecccccccCCCCCCCCCCCCCCC----CCChHHHHHHHHHhCCC
Q 015746          151 VTFDVVLDNNGKN-LDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN  224 (401)
Q Consensus       151 ~~~d~Vv~~a~~~-~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E~~~~~~----~~~~~~~ek~~~e~g~~  224 (401)
                      +  |+|||+++.. +.++.+++++|++.| +++||+ |   +||...    .|..+..+    ..+|..+|+++++.+++
T Consensus        80 ~--d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~  149 (318)
T 2r6j_A           80 V--DVVISALAFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIP  149 (318)
T ss_dssp             C--SEEEECCCGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             C--CEEEECCchhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCC
Confidence            5  9999999853 678999999999998 999985 4   354321    12221111    13577788888888999


Q ss_pred             eEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC-CCCCCH
Q 015746          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAVTL  303 (401)
Q Consensus       225 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~-~~~~t~  303 (401)
                      ++++||+.+++.     +...++.....++.+.++++++..++|+|++|+|++++.+++++... +++|++.+ ++.+|+
T Consensus       150 ~~~lr~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~g~~~~~s~  223 (318)
T 2r6j_A          150 YTYVSANCFASY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRAL-NRVVIYRPSTNIITQ  223 (318)
T ss_dssp             BEEEECCEEHHH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGT-TEEEECCCGGGEEEH
T ss_pred             eEEEEcceehhh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcccc-CeEEEecCCCCccCH
Confidence            999999988764     22223222234556677888888999999999999999999887544 47888775 478999


Q ss_pred             HHHHHHHHHHhCCCceEEecCCC
Q 015746          304 DGMAKLCAQAAGLPVEIVHYDPK  326 (401)
Q Consensus       304 ~el~~~i~~~~g~~~~~~~~~~~  326 (401)
                      .|+++.+.+.+|++.++..++..
T Consensus       224 ~e~~~~~~~~~g~~~~~~~~~~~  246 (318)
T 2r6j_A          224 LELISRWEKKIGKKFKKIHVPEE  246 (318)
T ss_dssp             HHHHHHHHHHHTCCCEEEEECHH
T ss_pred             HHHHHHHHHHhCCCCceeecCHH
Confidence            99999999999999888777644

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.93  E-value=7.4e-26  Score=218.47  Aligned_cols=230  Identities=15%  Similarity=0.102  Sum_probs=171.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC----HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD----PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D----~~~~~~~~  148 (401)
                      +|+||||    |||||||++++++|+++||+|++++|+.++...         ..+.. .+++++.+|    ++++.+++
T Consensus         5 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~l~~~~~v~~v~~D~l~d~~~l~~~~   71 (352)
T 1xgk_A            5 KKTIAVV----GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA---------EELQAIPNVTLFQGPLLNNVPLMDTLF   71 (352)
T ss_dssp             CCCEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH---------HHHHTSTTEEEEESCCTTCHHHHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH---------HHHhhcCCcEEEECCccCCHHHHHHHH
Confidence            5789999    999999999999999999999999998754310         11111 256677777    56688888


Q ss_pred             cCCcccEEEeCCCCC----hhhHHHHHHHHHhCC-CCEEEEecccc--cccCCCCCCCCCCCCCCCCCChHHHHHHHHHh
Q 015746          149 GGVTFDVVLDNNGKN----LDAVRPVADWAKSSG-VKQFLFISSAG--IYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~----~~~~~~ll~aa~~~g-v~~~v~~SS~~--vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~  221 (401)
                      +++  |+|||+++..    ....++++++|++.| +++|||+||.+  .|+..        .+..+..+|..+|+++++.
T Consensus        72 ~~~--d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~--------~~~~y~~sK~~~E~~~~~~  141 (352)
T 1xgk_A           72 EGA--HLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW--------PAVPMWAPKFTVENYVRQL  141 (352)
T ss_dssp             TTC--SEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC--------CCCTTTHHHHHHHHHHHTS
T ss_pred             hcC--CEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCC--------CCccHHHHHHHHHHHHHHc
Confidence            875  9999988742    233499999999999 99999999985  44331        1122335889999999999


Q ss_pred             CCCeEEEecCeeecCCCCCCcHHHHHHH-HHcCCC-cccCCCCcceeeeeeH-HHHHHHHHHHhcCCC-cCCCcEEEecC
Q 015746          222 FSNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRP-VPIPGSGMQFTNIAHV-RDLSSMLTLAVENPE-AASSNIFNLVS  297 (401)
Q Consensus       222 g~~~~ilRp~~v~G~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~v~v-~D~a~~~~~~~~~~~-~~~g~~~~~~~  297 (401)
                      ++++++|||+ +||+.........+... ...+.. +.+++++++.++++|+ +|+|++++.+++++. ...|++||+++
T Consensus       142 gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~  220 (352)
T 1xgk_A          142 GLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF  220 (352)
T ss_dssp             SSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS
T ss_pred             CCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec
Confidence            9999999987 68876533211111001 112332 1346777888999999 899999999998753 22358999995


Q ss_pred             CCCCCHHHHHHHHHHHhCCCceEEecCCCcc
Q 015746          298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA  328 (401)
Q Consensus       298 ~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~  328 (401)
                       +.+|+.|+++.+.+.+|++.++..+|....
T Consensus       221 -~~~s~~e~~~~i~~~~G~~~~~~~vp~~~~  250 (352)
T 1xgk_A          221 -ETLSPVQVCAAFSRALNRRVTYVQVPKVEI  250 (352)
T ss_dssp             -EEECHHHHHHHHHHHHTSCEEEEECSSCCC
T ss_pred             -CCCCHHHHHHHHHHHHCCCCceEECCHHHH
Confidence             679999999999999999998888875543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=4.8e-26  Score=208.64  Aligned_cols=215  Identities=16%  Similarity=0.179  Sum_probs=160.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      +++|+||||    ||+|+||++++++|+++  |++|++++|+.++...+            ..+++++.+|   .+++.+
T Consensus         2 ~~~~~ilVt----GasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~D~~d~~~~~~   65 (253)
T 1xq6_A            2 ANLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINP   65 (253)
T ss_dssp             CSCCEEEEE----STTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHH
T ss_pred             CCCCEEEEE----cCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------CCCeeEEEecCCCHHHHHH
Confidence            347899999    99999999999999999  89999999986443221            2356777777   678888


Q ss_pred             hhcCCcccEEEeCCCC-----------------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGVTFDVVLDNNGK-----------------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~-----------------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      ++++  +|+|||+++.                             |+.++.+++++|++.++++||++||.+++...  .
T Consensus        66 ~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~--~  141 (253)
T 1xq6_A           66 AFQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--H  141 (253)
T ss_dssp             HHTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--C
T ss_pred             HHcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC--C
Confidence            8886  5999999873                             34678999999999999999999998876422  1


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHH
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  277 (401)
                      +........+..+|..+|.++++.+++++++||+.+||+.....       .+..+....++++   ...+++++|+|++
T Consensus       142 ~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~-------~~~~~~~~~~~~~---~~~~~~~~Dva~~  211 (253)
T 1xq6_A          142 PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-------ELLVGKDDELLQT---DTKTVPRADVAEV  211 (253)
T ss_dssp             GGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS-------CEEEESTTGGGGS---SCCEEEHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh-------hhhccCCcCCcCC---CCcEEcHHHHHHH
Confidence            11110001111257778888888899999999999999864321       0111111122322   2568999999999


Q ss_pred             HHHHhcCCCcCCCcEEEecCCC---CCCHHHHHHHHHHHhCCC
Q 015746          278 LTLAVENPEAASSNIFNLVSDR---AVTLDGMAKLCAQAAGLP  317 (401)
Q Consensus       278 ~~~~~~~~~~~~g~~~~~~~~~---~~t~~el~~~i~~~~g~~  317 (401)
                      ++.+++++.. .|++||+++++   .+++.|+++.+.+.+|++
T Consensus       212 ~~~~~~~~~~-~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          212 CIQALLFEEA-KNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             HHHHTTCGGG-TTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             HHHHHcCccc-cCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            9999988654 35899999864   599999999999998863

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.93  E-value=1.4e-25  Score=211.93  Aligned_cols=231  Identities=16%  Similarity=0.165  Sum_probs=171.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+||||    ||||+||++++++|+++||+|++++|+......-. .....+..+...+++++.+|   ++++.+++++
T Consensus         2 ~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~   76 (307)
T 2gas_A            2 ENKILIL----GPTGAIGRHIVWASIKAGNPTYALVRKTITAANPE-TKEELIDNYQSLGVILLEGDINDHETLVKAIKQ   76 (307)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHH-HHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred             CcEEEEE----CCCchHHHHHHHHHHhCCCcEEEEECCCcccCChH-HHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence            6789999    99999999999999999999999999862110000 00001122334578888888   6778888887


Q ss_pred             CcccEEEeCCCC-ChhhHHHHHHHHHhCC-CCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHHHHHHHHhCCC
Q 015746          151 VTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSN  224 (401)
Q Consensus       151 ~~~d~Vv~~a~~-~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~ek~~~e~g~~  224 (401)
                      .  |+|||+++. .+.++.+++++|++.| ++|||+ |   +||...    .+..+..+.    .+|..+|+++++.+++
T Consensus        77 ~--d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~  146 (307)
T 2gas_A           77 V--DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVP  146 (307)
T ss_dssp             C--SEEEECSSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCC
T ss_pred             C--CEEEECCcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCC
Confidence            5  999999985 4788999999999998 999984 3   354321    122221221    3577788888888999


Q ss_pred             eEEEecCeeecCCCCCCcHHHHHHH---HHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC-CC
Q 015746          225 WASFRPQYMIGSGNNKDCEEWFFDR---IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RA  300 (401)
Q Consensus       225 ~~ilRp~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~-~~  300 (401)
                      ++++||+.+++....     .+...   ...++.+.++++++..+++++++|+|++++.+++++... +++|++.++ +.
T Consensus       147 ~~~lrp~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~~~~~~  220 (307)
T 2gas_A          147 YTYLCCHAFTGYFLR-----NLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTL-NKAVHIRLPKNY  220 (307)
T ss_dssp             BEEEECCEETTTTGG-----GTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGT-TEEEECCCGGGE
T ss_pred             eEEEEcceeeccccc-----cccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcccc-CceEEEeCCCCc
Confidence            999999999886321     11111   123445667788888999999999999999999887544 478888764 68


Q ss_pred             CCHHHHHHHHHHHhCCCceEEecCC
Q 015746          301 VTLDGMAKLCAQAAGLPVEIVHYDP  325 (401)
Q Consensus       301 ~t~~el~~~i~~~~g~~~~~~~~~~  325 (401)
                      +|++|+++.+.+.+|++.++..++.
T Consensus       221 ~s~~e~~~~~~~~~g~~~~~~~~~~  245 (307)
T 2gas_A          221 LTQNEVIALWEKKIGKTLEKTYVSE  245 (307)
T ss_dssp             EEHHHHHHHHHHHHTSCCEEEEECH
T ss_pred             CCHHHHHHHHHHHhCCCCceeecCH
Confidence            9999999999999999988877654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.93  E-value=2.4e-25  Score=199.97  Aligned_cols=203  Identities=15%  Similarity=0.221  Sum_probs=130.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHH-HhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG-NVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~-~~~~~~~~  153 (401)
                      |+||||    ||||+||++++++|+++|++|++++|+.++...           +. .+++++.+|..+.+ +.+.+  +
T Consensus         1 MkvlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~-~~~~~~~~D~~d~~~~~~~~--~   62 (221)
T 3ew7_A            1 MKIGII----GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-----------TH-KDINILQKDIFDLTLSDLSD--Q   62 (221)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-----------HC-SSSEEEECCGGGCCHHHHTT--C
T ss_pred             CeEEEE----cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-----------cc-CCCeEEeccccChhhhhhcC--C
Confidence            689999    999999999999999999999999998754332           11 47889999832211 66666  4


Q ss_pred             cEEEeCCCC-------ChhhHHHHHHHHHhCCCCEEEEecccccccC-CCCCCCCCCCCCCC----CCChHHHHHH--HH
Q 015746          154 DVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKP----DAGHVQVEKY--IS  219 (401)
Q Consensus       154 d~Vv~~a~~-------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~-~~~~~~~E~~~~~~----~~~~~~~ek~--~~  219 (401)
                      |+|||+++.       |+.++.+++++|++.++++||++||.++|.. ....+..|+.+..+    ..+|...|.+  +.
T Consensus        63 d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~  142 (221)
T 3ew7_A           63 NVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK  142 (221)
T ss_dssp             SEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHH
T ss_pred             CEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999985       5788999999999999999999999876543 33223444443322    2456666654  55


Q ss_pred             --HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC
Q 015746          220 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (401)
Q Consensus       220 --e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~  297 (401)
                        +.++++++|||+++||++....   .+   ...+..+.+.+++   .++++++|+|++++.+++++...+ ++||+++
T Consensus       143 ~~~~gi~~~ivrp~~v~g~~~~~~---~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g-~~~~~~~  212 (221)
T 3ew7_A          143 SHQAEFSWTYISPSAMFEPGERTG---DY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLN-EHFTVAG  212 (221)
T ss_dssp             TTTTTSCEEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTT-SEEECCC
T ss_pred             hhccCccEEEEeCcceecCCCccC---ce---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccC-CEEEECC
Confidence              5799999999999999843221   11   1223344444444   368999999999999999988665 9999999


Q ss_pred             CCCCCHHH
Q 015746          298 DRAVTLDG  305 (401)
Q Consensus       298 ~~~~t~~e  305 (401)
                      +...+.+|
T Consensus       213 ~~~~~~~~  220 (221)
T 3ew7_A          213 KLEHHHHH  220 (221)
T ss_dssp             --------
T ss_pred             CCcccccc
Confidence            88776654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.93  E-value=5.8e-26  Score=216.13  Aligned_cols=230  Identities=17%  Similarity=0.204  Sum_probs=172.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +||+||||    ||||+||++++++|+++||+|++++|+. ......+   ...+..+...+++++.+|   ++++.+++
T Consensus         3 ~~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~l~~~~~~~v~~v~~D~~d~~~l~~a~   75 (321)
T 3c1o_A            3 HMEKIIIY----GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS---VQLREEFRSMGVTIIEGEMEEHEKMVSVL   75 (321)
T ss_dssp             -CCCEEEE----TTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH---HHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             cccEEEEE----cCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH---HHHHHHhhcCCcEEEEecCCCHHHHHHHH
Confidence            46889999    9999999999999999999999999986 2110000   001112334578889888   67788899


Q ss_pred             cCCcccEEEeCCCCC-hhhHHHHHHHHHhCC-CCEEEEecccccccCCCCCCCCCCCCCCC----CCChHHHHHHHHHhC
Q 015746          149 GGVTFDVVLDNNGKN-LDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENF  222 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~-~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E~~~~~~----~~~~~~~ek~~~e~g  222 (401)
                      ++.  |+|||+++.. +.++.+++++|++.| +++||+ |   +|+...    .|..+..+    ..+|..+|+++++.+
T Consensus        76 ~~~--d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~  145 (321)
T 3c1o_A           76 KQV--DIVISALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVLEKKRIIRRAIEAAA  145 (321)
T ss_dssp             TTC--SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCC--CEEEECCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHHHHHHHHHHHHHHcC
Confidence            885  9999999854 688999999999999 999983 3   454321    12221111    035777888888889


Q ss_pred             CCeEEEecCeeecCCCCCCcHHHHHH---HHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC-C
Q 015746          223 SNWASFRPQYMIGSGNNKDCEEWFFD---RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-D  298 (401)
Q Consensus       223 ~~~~ilRp~~v~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~-~  298 (401)
                      +++++|||+.+++..     ...+..   ....++.+.++++++..+++++++|+|++++.++.++... |++|++.+ +
T Consensus       146 ~~~~~lrp~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~g~~  219 (321)
T 3c1o_A          146 LPYTYVSANCFGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCC-NRIVIYRPPK  219 (321)
T ss_dssp             CCBEEEECCEEHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGT-TEEEECCCGG
T ss_pred             CCeEEEEeceecccc-----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcccc-CeEEEEeCCC
Confidence            999999999988751     222221   1123455677888888999999999999999999987644 47888876 4


Q ss_pred             CCCCHHHHHHHHHHHhCCCceEEecCC
Q 015746          299 RAVTLDGMAKLCAQAAGLPVEIVHYDP  325 (401)
Q Consensus       299 ~~~t~~el~~~i~~~~g~~~~~~~~~~  325 (401)
                      +.+|++|+++.+.+.+|++.++..++.
T Consensus       220 ~~~t~~e~~~~~~~~~g~~~~~~~~~~  246 (321)
T 3c1o_A          220 NIISQNELISLWEAKSGLSFKKVHMPD  246 (321)
T ss_dssp             GEEEHHHHHHHHHHHHTSCCCEEEECH
T ss_pred             CcccHHHHHHHHHHHcCCcceeeeCCH
Confidence            789999999999999999988877764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.92  E-value=3.3e-25  Score=209.51  Aligned_cols=232  Identities=19%  Similarity=0.240  Sum_probs=171.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ||+||||    ||||+||++++++|+++||+|++++|+.... ...+   ...+..+...+++++.+|   ++++.++++
T Consensus         4 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~---~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~   76 (308)
T 1qyc_A            4 RSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK---AQLLESFKASGANIVHGSIDDHASLVEAVK   76 (308)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH---HHHHHHHHTTTCEEECCCTTCHHHHHHHHH
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHH---HHHHHHHHhCCCEEEEeccCCHHHHHHHHc
Confidence            6789999    9999999999999999999999999986432 0000   001122334578888888   677888888


Q ss_pred             CCcccEEEeCCCC-ChhhHHHHHHHHHhCC-CCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHHHHHHHHhCC
Q 015746          150 GVTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFS  223 (401)
Q Consensus       150 ~~~~d~Vv~~a~~-~~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~ek~~~e~g~  223 (401)
                      ++  |+|||+++. ++.++.+++++|++.| ++|||+ |+   ||...    .|..+..+.    .+|..+|+++++.++
T Consensus        77 ~~--d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~  146 (308)
T 1qyc_A           77 NV--DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFP-SE---FGNDV----DNVHAVEPAKSVFEVKAKVRRAIEAEGI  146 (308)
T ss_dssp             TC--SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTC
T ss_pred             CC--CEEEECCcchhhhhHHHHHHHHHhcCCCceEee-cc---cccCc----cccccCCcchhHHHHHHHHHHHHHhcCC
Confidence            75  999999985 3678899999999998 999984 43   44221    122221221    357778888888899


Q ss_pred             CeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC-CCCC
Q 015746          224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVT  302 (401)
Q Consensus       224 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~-~~~t  302 (401)
                      +++++||+.++|...... ... ......++.+.+++++++.++|+|++|+|++++.+++++... +++|++.++ +.+|
T Consensus       147 ~~~~~r~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~g~~~~~s  223 (308)
T 1qyc_A          147 PYTYVSSNCFAGYFLRSL-AQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL-NKTLYLRLPANTLS  223 (308)
T ss_dssp             CBEEEECCEEHHHHTTTT-TCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGT-TEEEECCCGGGEEE
T ss_pred             CeEEEEeceecccccccc-ccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcccc-CeEEEEeCCCCccC
Confidence            999999999988532110 000 001123455677888889999999999999999999886544 478888764 6899


Q ss_pred             HHHHHHHHHHHhCCCceEEecCC
Q 015746          303 LDGMAKLCAQAAGLPVEIVHYDP  325 (401)
Q Consensus       303 ~~el~~~i~~~~g~~~~~~~~~~  325 (401)
                      +.|+++.+.+.+|++.++..++.
T Consensus       224 ~~e~~~~~~~~~g~~~~~~~~~~  246 (308)
T 1qyc_A          224 LNELVALWEKKIDKTLEKAYVPE  246 (308)
T ss_dssp             HHHHHHHHHHHTTSCCEEEEECH
T ss_pred             HHHHHHHHHHHhCCCCceEeCCH
Confidence            99999999999999988877654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.92  E-value=1.1e-24  Score=196.42  Aligned_cols=200  Identities=16%  Similarity=0.165  Sum_probs=142.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHH-HhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG-NVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~-~~~~~~~~  153 (401)
                      |+||||    ||||+||++++++|+++|++|++++|+.++..           .+...+++++.+|..+.+ +.+.+.  
T Consensus         1 MkilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~~~~D~~d~~~~~~~~~--   63 (224)
T 3h2s_A            1 MKIAVL----GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-----------DRLGATVATLVKEPLVLTEADLDSV--   63 (224)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-----------HHTCTTSEEEECCGGGCCHHHHTTC--
T ss_pred             CEEEEE----cCCCHHHHHHHHHHHHCCCEEEEEEecccccc-----------cccCCCceEEecccccccHhhcccC--
Confidence            689999    99999999999999999999999999875433           222357889999932211 566664  


Q ss_pred             cEEEeCCCC---------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCC---CCCCCCCCCCCCCChHHHHHHHH--
Q 015746          154 DVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE---PPHVEGDVVKPDAGHVQVEKYIS--  219 (401)
Q Consensus       154 d~Vv~~a~~---------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~---~~~~E~~~~~~~~~~~~~ek~~~--  219 (401)
                      |+|||+++.         |+.++.+++++|++.| ++||++||.+.+.....   .+..|.....+ .+.|...|...  
T Consensus        64 d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~sK~~~e~  141 (224)
T 3h2s_A           64 DAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS-QPWYDGALYQYYE  141 (224)
T ss_dssp             SEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG-STTHHHHHHHHHH
T ss_pred             CEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc-chhhHHHHHHHHH
Confidence            999999997         7899999999999999 89999999876543322   12333332222 24455544332  


Q ss_pred             ------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEE
Q 015746          220 ------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  293 (401)
Q Consensus       220 ------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~  293 (401)
                            +.++++++|||+++||++....+       ......+..   +...+++++++|+|++++.+++++...+ ++|
T Consensus       142 ~~~~~~~~~i~~~ivrp~~v~g~~~~~~~-------~~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g-~~~  210 (224)
T 3h2s_A          142 YQFLQMNANVNWIGISPSEAFPSGPATSY-------VAGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIR-DRI  210 (224)
T ss_dssp             HHHHTTCTTSCEEEEEECSBCCCCCCCCE-------EEESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTT-SEE
T ss_pred             HHHHHhcCCCcEEEEcCccccCCCcccCc-------eeccccccc---CCCCCceEeHHHHHHHHHHHhcCccccC-CEE
Confidence                  34899999999999998543320       011122222   2344689999999999999999987665 999


Q ss_pred             EecCCCCCCHH
Q 015746          294 NLVSDRAVTLD  304 (401)
Q Consensus       294 ~~~~~~~~t~~  304 (401)
                      ++++.+.....
T Consensus       211 ~~~~~~~~~~~  221 (224)
T 3h2s_A          211 VVRDADLEHHH  221 (224)
T ss_dssp             EEEECC-----
T ss_pred             EEecCcchhcc
Confidence            99987654443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=3.1e-24  Score=199.17  Aligned_cols=189  Identities=15%  Similarity=0.133  Sum_probs=150.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +||+||||    ||+|+||++++++|+++|++|++++|+..+..              ..+++++.+|   .+++.++++
T Consensus         2 ~~k~vlVT----Gasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~   63 (267)
T 3rft_A            2 AMKRLLVT----GAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA   63 (267)
T ss_dssp             CEEEEEEE----STTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc
Confidence            46789999    99999999999999999999999999875432              1366777777   777888888


Q ss_pred             CCcccEEEeCCCC------------ChhhHHHHHHHHHhCCCCEEEEecccccccCC-CCCCCCCCCCCCCCCChHHHHH
Q 015746          150 GVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEK  216 (401)
Q Consensus       150 ~~~~d~Vv~~a~~------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~-~~~~~~E~~~~~~~~~~~~~ek  216 (401)
                      +  +|+|||+||.            |+.++.+++++|++.++++||++||..+|+.. ...++.|+.+..+. +.|+..|
T Consensus        64 ~--~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~-~~Y~~sK  140 (267)
T 3rft_A           64 G--CDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPD-GLYGVSK  140 (267)
T ss_dssp             T--CSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC-SHHHHHH
T ss_pred             C--CCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC-ChHHHHH
Confidence            6  5999999984            68899999999999999999999999999743 34567777766554 6666555


Q ss_pred             HHH---------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc
Q 015746          217 YIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       217 ~~~---------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ...         ++++++++|||+.|||+.                      +++...++|++++|+++++..+++.+..
T Consensus       141 ~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~  198 (267)
T 3rft_A          141 CFGENLARMYFDKFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVL  198 (267)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCC
T ss_pred             HHHHHHHHHHHHHhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCC
Confidence            433         358999999999999872                      2344557789999999999999998776


Q ss_pred             CCCcEEEecCCCCCCHHH
Q 015746          288 ASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       288 ~~g~~~~~~~~~~~t~~e  305 (401)
                      .+ .++++.+++..++.+
T Consensus       199 ~~-~~~~~~s~~~~~~~~  215 (267)
T 3rft_A          199 GC-PVVWGASANDAGWWD  215 (267)
T ss_dssp             CS-CEEEECCCCTTCCBC
T ss_pred             Cc-eEEEEeCCCCCCccc
Confidence            43 678888776554433

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=9.1e-24  Score=187.44  Aligned_cols=190  Identities=18%  Similarity=0.222  Sum_probs=141.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.++....           ...+++++.+|   ++++.+++++
T Consensus         3 ~~~ilVt----GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~   67 (206)
T 1hdo_A            3 VKKIAIF----GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------GPRPAHVVVGDVLQAADVDKTVAG   67 (206)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------SCCCSEEEESCTTSHHHHHHHHTT
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----------cCCceEEEEecCCCHHHHHHHHcC
Confidence            3799999    9999999999999999999999999987654321           12467888887   6778888887


Q ss_pred             CcccEEEeCCCC---------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHh
Q 015746          151 VTFDVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (401)
Q Consensus       151 ~~~d~Vv~~a~~---------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~  221 (401)
                      .  |+|||+++.         |+.++.+++++|++.++++||++||.++|+.....+.   ....+..+|..+|+++++.
T Consensus        68 ~--d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~---~~~~y~~~K~~~e~~~~~~  142 (206)
T 1hdo_A           68 Q--DAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP---RLQAVTDDHIRMHKVLRES  142 (206)
T ss_dssp             C--SEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG---GGHHHHHHHHHHHHHHHHT
T ss_pred             C--CEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc---cchhHHHHHHHHHHHHHhC
Confidence            5  999999985         4678999999999999999999999999976533221   0001113455667777778


Q ss_pred             CCCeEEEecCeeecCCCC-CCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          222 FSNWASFRPQYMIGSGNN-KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       222 g~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      +++++++||+.++ ++.. ..+..            .+.+...  .++++++|+|++++.+++++... |++|++++++
T Consensus       143 ~i~~~~lrp~~~~-~~~~~~~~~~------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~-g~~~~i~~g~  205 (206)
T 1hdo_A          143 GLKYVAVMPPHIG-DQPLTGAYTV------------TLDGRGP--SRVISKHDLGHFMLRCLTTDEYD-GHSTYPSHQY  205 (206)
T ss_dssp             CSEEEEECCSEEE-CCCCCSCCEE------------ESSSCSS--CSEEEHHHHHHHHHHTTSCSTTT-TCEEEEECCC
T ss_pred             CCCEEEEeCCccc-CCCCCcceEe------------cccCCCC--CCccCHHHHHHHHHHHhcCcccc-ccceeeeccc
Confidence            9999999999983 3221 11100            0011110  47999999999999999987543 5999999875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=8.1e-25  Score=195.82  Aligned_cols=191  Identities=18%  Similarity=0.156  Sum_probs=142.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ++|+||||    ||+|+||++++++|+++|+  +|++++|+..+.               ..+++++.+|..+.+.+.+.
T Consensus         4 ~~~~vlVt----GatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------------~~~~~~~~~D~~~~~~~~~~   64 (215)
T 2a35_A            4 TPKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRLDNPVGPLAELLPQLDG   64 (215)
T ss_dssp             CCCEEEEE----CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTEECCBSCHHHHGGGCCS
T ss_pred             CCceEEEE----CCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------------CCCceEEeccccCHHHHHHh
Confidence            35799999    9999999999999999998  999999987541               12566777885554444333


Q ss_pred             CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHH
Q 015746          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek  216 (401)
                      . +|+|||+++.              |+.++.+++++|++.++++||++||.++|+.+.         ..+..+|.++|+
T Consensus        65 ~-~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~---------~~y~~sK~~~e~  134 (215)
T 2a35_A           65 S-IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS---------IFYNRVKGELEQ  134 (215)
T ss_dssp             C-CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS---------SHHHHHHHHHHH
T ss_pred             h-hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc---------cHHHHHHHHHHH
Confidence            3 7999999985              466889999999999999999999999986421         011235666777


Q ss_pred             HHHHhCCC-eEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEe
Q 015746          217 YISENFSN-WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (401)
Q Consensus       217 ~~~e~g~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~  295 (401)
                      ++.+.+++ ++++||+.+||+.....+...    +. +...++ +++  .++++|++|+|++++.+++++.   +++||+
T Consensus       135 ~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~----~~-~~~~~~-~~~--~~~~i~~~Dva~~~~~~~~~~~---~~~~~i  203 (215)
T 2a35_A          135 ALQEQGWPQLTIARPSLLFGPREEFRLAEI----LA-APIARI-LPG--KYHGIEACDLARALWRLALEEG---KGVRFV  203 (215)
T ss_dssp             HHTTSCCSEEEEEECCSEESTTSCEEGGGG----TT-CCCC-----C--HHHHHHHHHHHHHHHHHHTCCC---SEEEEE
T ss_pred             HHHHcCCCeEEEEeCceeeCCCCcchHHHH----HH-Hhhhhc-cCC--CcCcEeHHHHHHHHHHHHhcCC---CCceEE
Confidence            77777999 999999999999765332222    22 221222 233  5789999999999999999875   489999


Q ss_pred             cCCCCCCH
Q 015746          296 VSDRAVTL  303 (401)
Q Consensus       296 ~~~~~~t~  303 (401)
                      ++++.+++
T Consensus       204 ~~~~~~~~  211 (215)
T 2a35_A          204 ESDELRKL  211 (215)
T ss_dssp             EHHHHHHH
T ss_pred             cHHHHHHh
Confidence            98765444

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=3.1e-23  Score=188.83  Aligned_cols=198  Identities=17%  Similarity=0.218  Sum_probs=142.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .++||+||||    ||+|+||++++++|+++| ++|++++|+.++...+           ...+++++.+|   ++++.+
T Consensus        20 ~~~mk~vlVt----GatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~   84 (236)
T 3qvo_A           20 QGHMKNVLIL----GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----------YPTNSQIIMGDVLNHAALKQ   84 (236)
T ss_dssp             --CCEEEEEE----TTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-----------CCTTEEEEECCTTCHHHHHH
T ss_pred             cCcccEEEEE----eCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-----------ccCCcEEEEecCCCHHHHHH
Confidence            4557899999    999999999999999999 8999999988655432           12367778887   788888


Q ss_pred             hhcCCcccEEEeCCCCC--hhhHHHHHHHHHhCCCCEEEEecccccccCCCCC--CCCCCCCCCCCCChHHHHHHHHHhC
Q 015746          147 VVGGVTFDVVLDNNGKN--LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGHVQVEKYISENF  222 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~--~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~--~~~E~~~~~~~~~~~~~ek~~~e~g  222 (401)
                      ++++.  |+|||+++..  ...++++++++++.++++||++||.++|+.....  +..+.....+...+...++++.+.+
T Consensus        85 ~~~~~--D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  162 (236)
T 3qvo_A           85 AMQGQ--DIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASG  162 (236)
T ss_dssp             HHTTC--SEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSC
T ss_pred             HhcCC--CEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCC
Confidence            99875  9999999853  3467899999999999999999999999865332  2233333333334555677888889


Q ss_pred             CCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc-eeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       223 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                      +++++||||.++++.....               .....+.. ...+++++|+|++++.+++++....|++|++++++.
T Consensus       163 i~~~~vrPg~i~~~~~~~~---------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          163 LEYTILRPAWLTDEDIIDY---------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             SEEEEEEECEEECCSCCCC---------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CCEEEEeCCcccCCCCcce---------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            9999999999999754321               01111111 135899999999999999998844469999998753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=1.5e-22  Score=184.50  Aligned_cols=192  Identities=23%  Similarity=0.244  Sum_probs=143.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      +++|+||||    ||+|+||++++++|+++|+  +|++++|+.++....           ...++.++.+|   ++++.+
T Consensus        16 m~~~~vlVt----Gasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~~   80 (242)
T 2bka_A           16 MQNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-----------AYKNVNQEVVDFEKLDDYAS   80 (242)
T ss_dssp             HTCCEEEEE----CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-----------GGGGCEEEECCGGGGGGGGG
T ss_pred             hcCCeEEEE----CCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-----------ccCCceEEecCcCCHHHHHH
Confidence            346899999    9999999999999999999  999999987654321           12357788888   566777


Q ss_pred             hhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH
Q 015746          147 VVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~  213 (401)
                      ++++  +|+|||++|.             |+.++.++++++++.++++||++||.++|+...         ..+..+|.+
T Consensus        81 ~~~~--~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~---------~~Y~~sK~~  149 (242)
T 2bka_A           81 AFQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN---------FLYLQVKGE  149 (242)
T ss_dssp             GGSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS---------SHHHHHHHH
T ss_pred             HhcC--CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCc---------chHHHHHHH
Confidence            7775  5999999995             467889999999999999999999999986321         112235666


Q ss_pred             HHHHHHHhCC-CeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcE
Q 015746          214 VEKYISENFS-NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (401)
Q Consensus       214 ~ek~~~e~g~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~  292 (401)
                      +|.+++..++ ++++|||+.+||+.........+........+. .++.    ..+++++|+|++++.+++++..  ++.
T Consensus       150 ~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~dva~~~~~~~~~~~~--~~~  222 (242)
T 2bka_A          150 VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD-SWAS----GHSVPVVTVVRAMLNNVVRPRD--KQM  222 (242)
T ss_dssp             HHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT-TGGG----GTEEEHHHHHHHHHHHHTSCCC--SSE
T ss_pred             HHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCc-cccC----CcccCHHHHHHHHHHHHhCccc--cCe
Confidence            7777777899 499999999999965433333344444433321 1221    3489999999999999998776  346


Q ss_pred             EEec
Q 015746          293 FNLV  296 (401)
Q Consensus       293 ~~~~  296 (401)
                      +++.
T Consensus       223 ~~~~  226 (242)
T 2bka_A          223 ELLE  226 (242)
T ss_dssp             EEEE
T ss_pred             eEee
Confidence            6654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=6.7e-22  Score=177.93  Aligned_cols=197  Identities=12%  Similarity=0.100  Sum_probs=142.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHH-hCCCeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      +|++||||    ||+|+||++++++|+ ++|++|++++|+.+ +...+.         ....+++++.+|   .+++.++
T Consensus         4 mmk~vlVt----Gasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~   70 (221)
T 3r6d_A            4 MYXYITIL----GAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI---------IDHERVTVIEGSFQNPGXLEQA   70 (221)
T ss_dssp             SCSEEEEE----STTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH---------HTSTTEEEEECCTTCHHHHHHH
T ss_pred             eEEEEEEE----eCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc---------cCCCceEEEECCCCCHHHHHHH
Confidence            34569999    999999999999999 89999999999876 443210         022467788887   6788888


Q ss_pred             hcCCcccEEEeCCCC-ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCC--CCCCC-CCCCChHHHHHHHHHhCC
Q 015746          148 VGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV--EGDVV-KPDAGHVQVEKYISENFS  223 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~-~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~--E~~~~-~~~~~~~~~ek~~~e~g~  223 (401)
                      +++.  |+|||+++. |+. ++++++++++.++++||++||.++|+........  ..... .+..+|..+|+++++.++
T Consensus        71 ~~~~--d~vv~~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i  147 (221)
T 3r6d_A           71 VTNA--EVVFVGAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNL  147 (221)
T ss_dssp             HTTC--SEEEESCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCS
T ss_pred             HcCC--CEEEEcCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCC
Confidence            8865  999999997 677 9999999999999999999999998753211000  00000 122346677788888899


Q ss_pred             CeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc-ceeeeeeHHHHHHHHHHHh--cCCCcCCCcEEEecCCC
Q 015746          224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM-QFTNIAHVRDLSSMLTLAV--ENPEAASSNIFNLVSDR  299 (401)
Q Consensus       224 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~~~~~~~--~~~~~~~g~~~~~~~~~  299 (401)
                      ++++||||.++++.....              ......+. ....+++.+|+|++++.++  +++....++.+.+.++.
T Consensus       148 ~~~~vrpg~v~~~~~~~~--------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          148 NYTILRLTWLYNDPEXTD--------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             EEEEEEECEEECCTTCCC--------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             CEEEEechhhcCCCCCcc--------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            999999999999732211              11111111 1123899999999999999  87775434788887654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.83  E-value=2.7e-21  Score=177.31  Aligned_cols=206  Identities=13%  Similarity=0.066  Sum_probs=133.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC--
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~--  151 (401)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.++...               .+.....|.+++.++++..  
T Consensus         1 Mk~vlVt----Gasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~~~   61 (255)
T 2dkn_A            1 MSVIAIT----GSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRCGG   61 (255)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHcCC
Confidence            4689999    999999999999999999999999998754321               1222222466677777622  


Q ss_pred             cccEEEeCCCC-------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCCC-CCC-------CCC--
Q 015746          152 TFDVVLDNNGK-------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP-HVE-------GDV--  204 (401)
Q Consensus       152 ~~d~Vv~~a~~-------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~~-~~E-------~~~--  204 (401)
                      ++|+|||+||.             |+.++.++++++..    .+.++||++||..+|+.....+ ..|       +.+  
T Consensus        62 ~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           62 VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             CCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHH
T ss_pred             CccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhh
Confidence            47999999984             45677788886655    3667999999999986541111 000       000  


Q ss_pred             ----CCCCCChHHHHHH-----HHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          205 ----VKPDAGHVQVEKY-----ISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       205 ----~~~~~~~~~~ek~-----~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                          ..+....|+..|.     +..       .+++++++|||.++|+...     .++.....+.....+. + ....+
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~-----~~~~~~~~~~~~~~~~-~-~~~~~  214 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ-----ASKADPRYGESTRRFV-A-PLGRG  214 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH-----HHHHCTTTHHHHHSCC-C-TTSSC
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh-----hcccchhhHHHHHHHH-H-HhcCC
Confidence                0011234555443     322       3899999999999987321     1111000000011111 1 33578


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHH
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~e  305 (401)
                      ++++|+|++++.+++++.. ..|++|+++++..++++|
T Consensus       215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999999999987632 347999999987665543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.81  E-value=8.8e-20  Score=169.71  Aligned_cols=214  Identities=16%  Similarity=0.149  Sum_probs=146.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++.. .++.++.+|   .+++.++
T Consensus        14 l~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~   82 (278)
T 2bgk_A           14 LQDKVAIIT----GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-------NNIGSPDVISFVHCDVTKDEDVRNL   82 (278)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHCCTTTEEEEECCTTCHHHHHHH
T ss_pred             ccCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH-------HHhCCCCceEEEECCCCCHHHHHHH
Confidence            346899999    99999999999999999999999998764332110       11111 156777777   5666666


Q ss_pred             hcCC-----cccEEEeCCCC----------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK----------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++..     ++|+|||+||.                      |+.++.++++++..    .+.++||++||...|.....
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  162 (278)
T 2bgk_A           83 VDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG  162 (278)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC
Confidence            6531     47999999983                      34555666666554    46679999999998864320


Q ss_pred             CCCCCCCCCCCCCChHHHHHH-----HHH-------hCCCeEEEecCeeecCCCCCCc--HHHHHHHHHcCCCcccCCCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKY-----ISE-------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~-----~~e-------~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~  262 (401)
                                 ....|...|.     .+.       .|+++++||||+++++......  ...+...+....+.      
T Consensus       163 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------  225 (278)
T 2bgk_A          163 -----------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN------  225 (278)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS------
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc------
Confidence                       1134554443     222       3899999999999998643211  12223333222111      


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHh
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~  314 (401)
                       ....+++++|+|++++.++.+... ..|++|++.++..+++.|+++.+.+.+
T Consensus       226 -~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          226 -LKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             -SCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             -cccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence             123578999999999999976543 457999999999999999999886643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.80  E-value=1.1e-19  Score=169.67  Aligned_cols=214  Identities=15%  Similarity=0.114  Sum_probs=146.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.++...+.        .....++.++.+|   .+++.++++
T Consensus         4 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~   71 (281)
T 3m1a_A            4 SAKVWLVT----GASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV--------AAYPDRAEAISLDVTDGERIDVVAA   71 (281)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH--------HHCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCCceEEEeeCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999876543221        1112356777777   566666665


Q ss_pred             CC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+....     
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  146 (281)
T 3m1a_A           72 DVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFA-----  146 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----
T ss_pred             HHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCC-----
Confidence            33     47999999994                    4455    66777777777878999999988764321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC------CcHHHHHHHHHcCCCcccCCCC
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK------DCEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~  262 (401)
                             ..+.|+..|...+            .|++++++|||.++++....      .....+..............  
T Consensus       147 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  217 (281)
T 3m1a_A          147 -------GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGS--  217 (281)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC---
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhc--
Confidence                   1245665553322            48999999999998874221      11111222221111111111  


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g  315 (401)
                       ....+.+++|+|++++.+++++..  +..|+++++......+....+.+.++
T Consensus       218 -~~~~~~~~~dva~a~~~~~~~~~~--~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          218 -DGSQPGDPAKAAAAIRLALDTEKT--PLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             -----CBCHHHHHHHHHHHHHSSSC--CSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCCCCCCHHHHHHHHHHHHhCCCC--CeEEecCchHHHHHHHHHHHHHHHHH
Confidence             224567899999999999998876  57999998877777888877777664

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.80  E-value=1.6e-19  Score=165.65  Aligned_cols=200  Identities=14%  Similarity=0.190  Sum_probs=137.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++.  ..++.++.+|   ++++.+
T Consensus         9 ~~~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   77 (255)
T 1fmc_A            9 LDGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVV-------DEIQQLGGQAFACRCDITSEQELSA   77 (255)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHHHHhCCceEEEEcCCCCHHHHHH
Confidence            346899999    99999999999999999999999999875432211       1111  1356667777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC-------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK-------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~-------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +++..     ++|+|||+||.                   |+.++.++++++.    +.+.++||++||...+....   
T Consensus        78 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---  154 (255)
T 1fmc_A           78 LADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI---  154 (255)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT---
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC---
Confidence            66521     47999999984                   3556666666653    55677999999988875421   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|+..|...+            .+++++++|||.++++.........+...+..+.++         .
T Consensus       155 ---------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~  216 (255)
T 1fmc_A          155 ---------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------R  216 (255)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------C
T ss_pred             ---------CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------c
Confidence                     1244555443322            278999999999998743222223344445444443         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCH
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~  303 (401)
                      .+.+++|+|++++.++.+... ..|++|+++++..+|+
T Consensus       217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             cCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            356899999999999976543 3579999999987764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.79  E-value=3.7e-19  Score=162.26  Aligned_cols=195  Identities=18%  Similarity=0.212  Sum_probs=135.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .+  ..+++++.+|   .+++.+++
T Consensus         5 ~~~~~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~--~~~~~~~~~D~~~~~~~~~~~   71 (244)
T 1cyd_A            5 FSGLRALVT----GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-------KE--CPGIEPVCVDLGDWDATEKAL   71 (244)
T ss_dssp             CTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HH--STTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------Hh--ccCCCcEEecCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875432211       00  1256666777   67788888


Q ss_pred             cCC-cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----C-CCEEEEecccccccCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----g-v~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      +.. ++|+|||+||.                    |+.++.++++++...    + .++||++||...|....       
T Consensus        72 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------  144 (244)
T 1cyd_A           72 GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-------  144 (244)
T ss_dssp             TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-------
T ss_pred             HHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC-------
Confidence            754 47999999993                    456666666665543    5 57999999998876431       


Q ss_pred             CCCCCCCChHHHHH-----HHHH-------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          203 DVVKPDAGHVQVEK-----YISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       203 ~~~~~~~~~~~~ek-----~~~e-------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                           ....|+..|     +.+.       .+++++++|||.++++.... .....++..+..+.+         .+.++
T Consensus       145 -----~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~  210 (244)
T 1cyd_A          145 -----NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFA  210 (244)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCB
T ss_pred             -----CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCC
Confidence                 113444444     3322       37899999999999874211 011223344443332         25688


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +++|+|++++.+++++.. ..|+.+++.++..
T Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          211 EVEDVVNSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             CHHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence            999999999999987543 4578999988753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.77  E-value=3.1e-19  Score=168.21  Aligned_cols=216  Identities=14%  Similarity=0.119  Sum_probs=142.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++......    .+......++.++.+|   .+++.+++
T Consensus        24 l~~k~vlIT----GasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~~~~~~   95 (302)
T 1w6u_A           24 FQGKVAFIT----GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE----QISSQTGNKVHAIQCDVRDPDMVQNTV   95 (302)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCceEEEEeCCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998754322110    0001112357778887   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH-----hCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~-----~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+||.                    |+.++.++++++.     +.+.++||++||...+....   
T Consensus        96 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  172 (302)
T 1w6u_A           96 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---  172 (302)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC---
Confidence            543     57999999983                    3556666666553     23456999999987764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc--HHHHHHHHHcCCCcccCCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                               ....|+..|...+            .|++++++|||.++++......  ...+...+....+.        
T Consensus       173 ---------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~--------  235 (302)
T 1w6u_A          173 ---------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC--------  235 (302)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT--------
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc--------
Confidence                     1234554443222            4889999999999987321110  01111233333322        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~  316 (401)
                       ..+.+++|+|++++.++..... ..|++|++.++..+++.|+++.+.+..|.
T Consensus       236 -~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          236 -GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             -SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred             -CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence             2367899999999999976543 35799999999888888888877766553

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.76  E-value=1.3e-17  Score=153.87  Aligned_cols=187  Identities=17%  Similarity=0.184  Sum_probs=131.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....              ..+.++.+|   ++++.++++
T Consensus        27 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~~~Dv~d~~~v~~~~~   88 (260)
T 3un1_A           27 QQKVVVIT----GASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--------------PDIHTVAGDISKPETADRIVR   88 (260)
T ss_dssp             TCCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS--------------TTEEEEESCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------------CceEEEEccCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998754321              256677777   666666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+..++|++||...+.....    
T Consensus        89 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----  164 (260)
T 3un1_A           89 EGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG----  164 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT----
T ss_pred             HHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC----
Confidence            32     47999999984                    456666777665    5667779999999877643211    


Q ss_pred             CCCCCCCCCChHHHHHHH---------HHh---CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYI---------SEN---FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~---------~e~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                            +....|.+.|..         .|.   |+++++|+||.++++.....    ....+....+.         ..+
T Consensus       165 ------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----~~~~~~~~~p~---------~r~  225 (260)
T 3un1_A          165 ------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE----THSTLAGLHPV---------GRM  225 (260)
T ss_dssp             ------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG----GHHHHHTTSTT---------SSC
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH----HHHHHhccCCC---------CCC
Confidence                  112345544432         222   78999999999999865432    12223333332         345


Q ss_pred             eeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCC
Q 015746          269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~  301 (401)
                      .+++|+|++++.+.+ .....|++|++.+|...
T Consensus       226 ~~~~dva~av~~L~~-~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          226 GEIRDVVDAVLYLEH-AGFITGEILHVDGGQNA  257 (260)
T ss_dssp             BCHHHHHHHHHHHHH-CTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHhcc-cCCCCCcEEEECCCeec
Confidence            589999999998843 33445799999998644

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.76  E-value=6e-19  Score=164.65  Aligned_cols=218  Identities=17%  Similarity=0.186  Sum_probs=148.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++......    .+.....  ..+.++.+|   ++++.+
T Consensus         9 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (281)
T 3svt_A            9 FQDRTYLVT----GGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQ----ELEALGANGGAIRYEPTDITNEDETAR   80 (281)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTTCCSSCEEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhCCCCceEEEEeCCCCCHHHHHH
Confidence            346899999    999999999999999999999999998754432110    0011100  145677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|++||+||.                     |+.++.++++++..    .+-.+||++||...+.... 
T Consensus        81 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  159 (281)
T 3svt_A           81 AVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR-  159 (281)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC-
Confidence            66543     47999999994                     45566666665543    4445899999988775432 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                 ....|.+.|...+            .|+++..|+||.++++..... ....+...+....++.      
T Consensus       160 -----------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~------  222 (281)
T 3svt_A          160 -----------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLP------  222 (281)
T ss_dssp             -----------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSS------
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCC------
Confidence                       1255666554332            268999999999988742110 0011223333333332      


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC-HHHHHHHHHHHhCCCc
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT-LDGMAKLCAQAAGLPV  318 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t-~~el~~~i~~~~g~~~  318 (401)
                         .+.+++|+|++++.++.+... .+|++|++.+|..++ ..|+++.+.+.+|.+.
T Consensus       223 ---r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          223 ---RQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             ---SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             ---CCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence               345799999999999986543 457999999998776 7889999999988764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.76  E-value=1.6e-17  Score=154.15  Aligned_cols=195  Identities=16%  Similarity=0.160  Sum_probs=137.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++.....       .++ ..++.++.+|   .+++.+++
T Consensus         9 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~   76 (271)
T 3tzq_B            9 LENKVAIIT----GACGGIGLETSRVLARAGARVVLADLPETDLAGAA-------ASV-GRGAVHHVVDLTNEVSVRALI   76 (271)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH-------HHH-CTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHh-CCCeEEEECCCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999886543211       111 3466777777   56666666


Q ss_pred             cCC-----cccEEEeCCCC----------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +..     ++|++||+||.                      |+.++.++++++    ++.+..+||++||...+....  
T Consensus        77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--  154 (271)
T 3tzq_B           77 DFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD--  154 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC--
Confidence            532     47999999984                      345566676666    667777999999988764321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|.+.|...+            +|+++++|+||.++++.........+...+....+..        
T Consensus       155 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------  216 (271)
T 3tzq_B          155 ----------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAG--------  216 (271)
T ss_dssp             ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTS--------
T ss_pred             ----------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCC--------
Confidence                      1245665553322            4899999999999998654322233344444443332        


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       .+.+++|+|++++.++.+... .+|+++++.+|.
T Consensus       217 -r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          217 -RIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -CCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence             245799999999999986644 568999999984

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.75  E-value=1.6e-18  Score=159.82  Aligned_cols=204  Identities=17%  Similarity=0.196  Sum_probs=135.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+......       .++ ...+.++.+|   ++++.++++
T Consensus         7 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~~   74 (259)
T 4e6p_A            7 EGKSALIT----GSARGIGRAFAEAYVREGATVAIADIDIERARQAA-------AEI-GPAAYAVQMDVTRQDSIDAAIA   74 (259)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCCceEEEeeCCCHHHHHHHHH
Confidence            46889999    99999999999999999999999999875443211       111 2356677777   566666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----C-CCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----g-v~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|+|||+||.                    |+.++.++++++...    + ..+||++||...+....    
T Consensus        75 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  150 (259)
T 4e6p_A           75 ATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA----  150 (259)
T ss_dssp             HHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC----
Confidence            32     47999999994                    456666777765432    3 35899999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc---CCCcccCCCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---KRPVPIPGSGMQ  264 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  264 (401)
                              ....|...|...+            .|+++++|+||.++++....  ...++.....   +.....+++..+
T Consensus       151 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p  220 (259)
T 4e6p_A          151 --------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVP  220 (259)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHST
T ss_pred             --------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCC
Confidence                    1245665553322            28999999999999884221  1111112111   111112222334


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      ...+.+++|+|++++.++..... ..|++|++.+|..+|
T Consensus       221 ~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          221 FGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             TSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            45678999999999998876543 457999999987654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.75  E-value=3.6e-18  Score=159.03  Aligned_cols=210  Identities=16%  Similarity=0.166  Sum_probs=128.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-----hcCCCeEEEcC---Hhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-----VSAGGKTVWGD---PAE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~D---~~~  143 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++     ...++.++.+|   +++
T Consensus         4 ~~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~D~~~~~~   72 (278)
T 1spx_A            4 FAEKVAIIT----GSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-------QQILAAGVSEQNVNSVVADVTTDAG   72 (278)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCGGGEEEEECCTTSHHH
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcccCCCceeEEecccCCHHH
Confidence            346789999    99999999999999999999999999875432211       011     01245667777   566


Q ss_pred             HHHhhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHh----CCCCEEEEeccccc
Q 015746          144 VGNVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKS----SGVKQFLFISSAGI  190 (401)
Q Consensus       144 ~~~~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~v  190 (401)
                      +.++++..     ++|+|||+||.                        |+.++.++++++..    .+ ++||++||...
T Consensus        73 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~  151 (278)
T 1spx_A           73 QDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS  151 (278)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccc
Confidence            66666522     47999999984                        22334455554443    36 79999999876


Q ss_pred             -ccCCCCCCCCCCCCCCCCCChHHHHHHH-----HH-------hCCCeEEEecCeeecCCCCCCc--HHHH------HHH
Q 015746          191 -YKPADEPPHVEGDVVKPDAGHVQVEKYI-----SE-------NFSNWASFRPQYMIGSGNNKDC--EEWF------FDR  249 (401)
Q Consensus       191 -y~~~~~~~~~E~~~~~~~~~~~~~ek~~-----~e-------~g~~~~ilRp~~v~G~~~~~~~--~~~~------~~~  249 (401)
                       +....            ....|...|..     +.       .|+++++||||.++++......  ...+      ...
T Consensus       152 ~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (278)
T 1spx_A          152 GLHATP------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  219 (278)
T ss_dssp             SSSCCT------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             cccCCC------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHH
Confidence             54321            12345544432     22       4899999999999987532110  0001      222


Q ss_pred             HHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc--CCCcEEEecCCCCCCHHHHHHHHHHHh
Q 015746          250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (401)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~g~~~~~~~~~~~t~~el~~~i~~~~  314 (401)
                      +....+.         ..+.+++|+|++++.++.++..  ..|++|++.+|..+++.|+++.+.+.+
T Consensus       220 ~~~~~p~---------~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          220 MKECVPA---------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHCTT---------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HHhcCCC---------cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            2221111         2367999999999999876542  457999999999999999999998764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.75  E-value=4.6e-18  Score=157.14  Aligned_cols=197  Identities=16%  Similarity=0.205  Sum_probs=119.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.+
T Consensus        12 l~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   80 (266)
T 1xq1_A           12 LKAKTVLVT----GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-------SKWQKKGFQVTGSVCDASLRPEREK   80 (266)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeeEEEECCCCCHHHHHH
Confidence            346899999    99999999999999999999999999865432210       1111  1246677777   555666


Q ss_pred             hhcC------CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGG------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~------~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++.      .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.... 
T Consensus        81 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-  159 (266)
T 1xq1_A           81 LMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS-  159 (266)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------
T ss_pred             HHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC-
Confidence            6542      247999999984                    456666777776    556778999999988764321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                 ....|...|...+            .|+++++||||.++++.........+...+....+         
T Consensus       160 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------  219 (266)
T 1xq1_A          160 -----------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKP---------  219 (266)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCC---------
Confidence                       1245555543322            28999999999999985432111111111111111         


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ...+++++|+|++++.++.++.. ..|+++++.+|..
T Consensus       220 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          220 LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             ----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            12467999999999999876533 4579999998853

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.75  E-value=1.4e-17  Score=151.38  Aligned_cols=186  Identities=16%  Similarity=0.135  Sum_probs=129.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+ ..                .+.++.+|   .+++.++++.
T Consensus         2 ~k~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~-~~----------------~~~~~~~D~~~~~~~~~~~~~   60 (242)
T 1uay_A            2 ERSALVT----GGASGLGRAAALALKARGYRVVVLDLRRE-GE----------------DLIYVEGDVTREEDVRRAVAR   60 (242)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS----------------SSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEccCcc-cc----------------ceEEEeCCCCCHHHHHHHHHH
Confidence            5789999    99999999999999999999999999875 21                34566666   6667776653


Q ss_pred             C----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC----C------CCEEEEeccccccc
Q 015746          151 V----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS----G------VKQFLFISSAGIYK  192 (401)
Q Consensus       151 ~----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~----g------v~~~v~~SS~~vy~  192 (401)
                      .    ++|+|||++|.                        |+.++.++++++...    +      .++||++||...+.
T Consensus        61 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  140 (242)
T 1uay_A           61 AQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE  140 (242)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH
T ss_pred             HHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            2    47999999983                        344566777766543    2      12899999998876


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCC
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  260 (401)
                      ...            ....|...|...         +   .|+++++||||.++++.... ....+...+....++  . 
T Consensus       141 ~~~------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--~-  204 (242)
T 1uay_A          141 GQI------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--P-  204 (242)
T ss_dssp             CCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--S-
T ss_pred             CCC------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--c-
Confidence            431            124555554222         2   28999999999999874322 112223334333332  1 


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t  302 (401)
                           ..+++++|+|++++.++.+ ....|++|++.+|..++
T Consensus       205 -----~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          205 -----PRLGRPEEYAALVLHILEN-PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             -----CSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCCC
T ss_pred             -----ccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCCeecC
Confidence                 2367899999999999988 44457999999987543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.74  E-value=7.7e-18  Score=153.56  Aligned_cols=194  Identities=16%  Similarity=0.198  Sum_probs=131.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++  .+++++.+|   .+++.++++
T Consensus         6 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~--~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 3d3w_A            6 AGRRVLVT----GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-------REC--PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHS--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHc--CCCCEEEEeCCCHHHHHHHHH
Confidence            45799999    99999999999999999999999999865432211       011  245666776   677888887


Q ss_pred             CC-cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CCEEEEecccccccCCCCCCCCCCC
Q 015746          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       150 ~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~g-v~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                      .. ++|+|||+||.                    |+.++.++++++..    .+ .++||++||...+....        
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  144 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT--------  144 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC--------
Confidence            54 48999999984                    34555566665544    35 57999999988765321        


Q ss_pred             CCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                          ....|...|...+            .+++++++|||.++++..... ....+...+....+         ...+++
T Consensus       145 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  211 (244)
T 3d3w_A          145 ----NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAE  211 (244)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBC
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcC
Confidence                1244554443322            378999999999998742110 00111223332222         235779


Q ss_pred             HHHHHHHHHHHhcCCC-cCCCcEEEecCCCC
Q 015746          271 VRDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~  300 (401)
                      ++|+|++++.++++.. ...|++|++.++..
T Consensus       212 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999999999998654 34579999998753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.74  E-value=1.5e-17  Score=147.10  Aligned_cols=170  Identities=11%  Similarity=0.106  Sum_probs=118.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC-c
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-T  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~-~  152 (401)
                      +|+||||    ||+|+||++++++|+ +|++|++++|+.+                   .+.....|++++.++++.. +
T Consensus         3 kM~vlVt----Gasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~   58 (202)
T 3d7l_A            3 AMKILLI----GASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGK   58 (202)
T ss_dssp             SCEEEEE----TTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCC
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCC
Confidence            4689999    999999999999999 9999999999763                   0111222577777777653 4


Q ss_pred             ccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 015746          153 FDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (401)
Q Consensus       153 ~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~  209 (401)
                      +|+|||+||.                    |+.++.++++++.+.   + ++||++||...+......       ..+..
T Consensus        59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~-------~~Y~~  130 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQG-------ASAAM  130 (202)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTC-------HHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCcc-------HHHHH
Confidence            7999999982                    567788899988776   4 589999998776432110       00112


Q ss_pred             ChHHHHHHHHH------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhc
Q 015746          210 GHVQVEKYISE------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (401)
Q Consensus       210 ~~~~~ek~~~e------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~  283 (401)
                      +|.+.+.+.+.      .+++++++||+.++++..          ...         +....+.+++++|+|++++.++.
T Consensus       131 sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------~~~---------~~~~~~~~~~~~dva~~~~~~~~  191 (202)
T 3d7l_A          131 ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------KLE---------PFFEGFLPVPAAKVARAFEKSVF  191 (202)
T ss_dssp             HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------HHG---------GGSTTCCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh----------hhh---------hhccccCCCCHHHHHHHHHHhhh
Confidence            33344443333      278999999999998731          111         11123568899999999998885


Q ss_pred             CCCcCCCcEEEec
Q 015746          284 NPEAASSNIFNLV  296 (401)
Q Consensus       284 ~~~~~~g~~~~~~  296 (401)
                      +..  .|++||+.
T Consensus       192 ~~~--~G~~~~vd  202 (202)
T 3d7l_A          192 GAQ--TGESYQVY  202 (202)
T ss_dssp             SCC--CSCEEEEC
T ss_pred             ccc--cCceEecC
Confidence            433  36899873

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.74  E-value=6e-18  Score=156.24  Aligned_cols=201  Identities=16%  Similarity=0.189  Sum_probs=132.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+......++.++.+|   .+++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (263)
T 3ai3_A            6 SGKVAVIT----GSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR----SLKEKFGVRVLEVAVDVATPEGVDAVVE   77 (263)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            45889999    999999999999999999999999998754322110    0000002356677777   566666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+....     
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  152 (263)
T 3ai3_A           78 SVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW-----  152 (263)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----
Confidence            32     47999999984                    344555555544    455677999999998875431     


Q ss_pred             CCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCc----------HHHHHHHHHcC-CCcc
Q 015746          201 EGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDC----------EEWFFDRIVRK-RPVP  257 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~----------~~~~~~~~~~~-~~~~  257 (401)
                             ....|...|...         |   .|+++++||||.++++......          ...+...+... .+  
T Consensus       153 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  223 (263)
T 3ai3_A          153 -------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP--  223 (263)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT--
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC--
Confidence                   124455555322         2   4899999999999987321100          01111122111 11  


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                             ...+.+++|+|++++.++..+.. ..|++|++.+|..++
T Consensus       224 -------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          224 -------IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             -------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             -------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence                   23467999999999999986543 457999999987654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.74  E-value=6.9e-18  Score=155.65  Aligned_cols=208  Identities=14%  Similarity=0.108  Sum_probs=128.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcc--cchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF--NEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+........  ......++.++.+|   .+++.+
T Consensus         5 ~~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            5 LRSALALVT----GAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            346789999    999999999999999999999999998754332110000000  00001357778887   556666


Q ss_pred             hhcCC-----cc-cEEEeCCCC--------------------ChhhHHHHHHHHHhC----C-CCEEEEecccccccCCC
Q 015746          147 VVGGV-----TF-DVVLDNNGK--------------------NLDAVRPVADWAKSS----G-VKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~-d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----g-v~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++ |+|||+||.                    |+.++.++++++...    + .++||++||...+....
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            66543     34 999999984                    455666777766543    4 46899999986543221


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                  ....|...|..         .+   .|++++++|||.++++.... ....+...+..+.+        
T Consensus       161 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~--------  219 (264)
T 2pd6_A          161 ------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMIP--------  219 (264)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGCT--------
T ss_pred             ------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhCC--------
Confidence                        12445555432         22   48999999999999985432 11111111111111        


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHH
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~e  305 (401)
                       ...+.+++|+|++++.++.++.. ..|+++++.++..++...
T Consensus       220 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          220 -MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             -CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence             12467899999999999976432 457999999987665444

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.74  E-value=1.4e-17  Score=153.14  Aligned_cols=198  Identities=16%  Similarity=0.204  Sum_probs=132.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ..++.++.+|   .+++.+
T Consensus        11 l~~k~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~   79 (260)
T 3awd_A           11 LDNRVAIVT----GGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-------EDLRMEGHDVSSVVMDVTNTESVQN   79 (260)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEecCCCHHHHHH
Confidence            346889999    99999999999999999999999999865432110       1111  2356777777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||+||.                     |+.++.++++++..    .+..+||++||...+.....
T Consensus        80 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  159 (260)
T 3awd_A           80 AVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP  159 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC
Confidence            66531     47999999983                     34555666666543    46679999999876543211


Q ss_pred             CCCCCCCCCCCCCChHHHHHH-----HH----H---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKY-----IS----E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~-----~~----e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                      .          ....|...|.     .+    +   .|+++++||||.++++..... ....+...+..+.+.       
T Consensus       160 ~----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------  222 (260)
T 3awd_A          160 Q----------QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM-------  222 (260)
T ss_dssp             S----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT-------
T ss_pred             C----------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc-------
Confidence            0          0134554443     22    2   489999999999999864311 112233444443332       


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        ..+++++|+|++++.++.+... .+|++|++.++.
T Consensus       223 --~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          223 --GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             --CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence              2367899999999999976533 457999999875

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.74  E-value=1.8e-17  Score=151.63  Aligned_cols=197  Identities=13%  Similarity=0.167  Sum_probs=130.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+......++.++.+|   ++++.++++.
T Consensus         2 ~k~vlIt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (250)
T 2cfc_A            2 SRVAIVT----GASSGNGLAIATRFLARGDRVAALDLSAETLEETAR----THWHAYADKVLRVRADVADEGDVNAAIAA   73 (250)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHSTTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998754322110    0000012346677777   5666666652


Q ss_pred             C-----cccEEEeCCCC-----------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          151 V-----TFDVVLDNNGK-----------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~-----------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      .     ++|+|||+||.                       |+.++    +.++..+++.+.++||++||...+....   
T Consensus        74 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  150 (250)
T 2cfc_A           74 TMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP---  150 (250)
T ss_dssp             HHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC---
Confidence            2     47999999984                       22233    3445555556778999999988764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               ....|...|...+            .+++++++|||.++++..... ....+...+....+.         
T Consensus       151 ---------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------  212 (250)
T 2cfc_A          151 ---------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------  212 (250)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------
Confidence                     1244555443322            289999999999999864320 011233334333332         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+.+++|+|++++.++.++.. ..|+++++.+|.
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          213 KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            2356899999999999987643 457999998874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.73  E-value=9.5e-18  Score=153.91  Aligned_cols=200  Identities=19%  Similarity=0.243  Sum_probs=113.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.+
T Consensus         7 ~~~k~vlIT----Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   75 (253)
T 3qiv_A            7 FENKVGIVT----GSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-------KQIVADGGTAISVAVDVSDPESAKA   75 (253)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHH
Confidence            346899999    99999999999999999999999999875543211       1111  1345677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC-----------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCC
Q 015746          147 VVGGV-----TFDVVLDNNGK-----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~-----------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      +++..     ++|+|||+||.                       |+.+    ++.++..+++.+..+||++||...|...
T Consensus        76 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  155 (253)
T 3qiv_A           76 MADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS  155 (253)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC
Confidence            65532     47999999985                       2344    4455555666666799999999887321


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH----h---CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE----N---FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e----~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                                ..+..+|.+.+.+.+.    .   |++++.++||.++++.........+...+..+.+.         ..
T Consensus       156 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~  216 (253)
T 3qiv_A          156 ----------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPL---------SR  216 (253)
T ss_dssp             --------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------------
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCC---------CC
Confidence                      1134578776665443    2   78999999999998854332222223333333332         23


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      +.+++|+|++++.++.+... .+|++|++.+|..+
T Consensus       217 ~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          217 MGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             ---CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence            45789999999999976543 45799999998754

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.73  E-value=1.2e-17  Score=156.83  Aligned_cols=200  Identities=17%  Similarity=0.208  Sum_probs=136.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.......+.++.+|   .+++.+++
T Consensus        39 l~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~d~~~v~~~~  110 (293)
T 3rih_A           39 LSARSVLVT----GGTKGIGRGIATVFARAGANVAVAARSPRELSSVTA----ELGELGAGNVIGVRLDVSDPGSCADAA  110 (293)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH----HHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998865543211    1111111356777787   55555555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccc-cCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIY-KPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy-~~~~~~~  198 (401)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+ ...    
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~----  186 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY----  186 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC----
Confidence            432     47999999994                    456677777766    45566799999997753 111    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                              +....|.+.|...+            .|++++.|+||.++++.... ....+...+....++..        
T Consensus       187 --------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~r--------  249 (293)
T 3rih_A          187 --------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPMGM--------  249 (293)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTTSS--------
T ss_pred             --------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCCCC--------
Confidence                    11245665553322            38999999999999873211 11233445555554433        


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                       +..++|+|++++.++..... ..|+++++.+|..+
T Consensus       250 -~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          250 -LGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             -CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             -CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence             34789999999999876543 56899999998654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.73  E-value=1.1e-16  Score=146.65  Aligned_cols=196  Identities=13%  Similarity=0.087  Sum_probs=120.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...               .++.++.+|   .+++.++++
T Consensus         6 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~d~~~~~~~~~   66 (250)
T 2fwm_X            6 SGKNVWVT----GAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ---------------YPFATEVMDVADAAQVAQVCQ   66 (250)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCCCSSC---------------CSSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc---------------CCceEEEcCCCCHHHHHHHHH
Confidence            45799999    99999999999999999999999999864210               125666666   666666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+...      
T Consensus        67 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------  140 (250)
T 2fwm_X           67 RLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR------  140 (250)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC------
Confidence            32     47999999984                    345556666665    55566799999998876432      


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc-HHHHHH-HHHcCCCcccCCCCccee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC-EEWFFD-RIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  266 (401)
                            +....|...|...+            .|+++++||||.++++...... ...... .+....  ..+.......
T Consensus       141 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~  212 (250)
T 2fwm_X          141 ------IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFG--EQFKLGIPLG  212 (250)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhh--hcccccCCCC
Confidence                  11245555553322            3899999999999987432110 000001 110000  0000011123


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+.+++|+|++++.++.++.. ..|+++++.+|..+
T Consensus       213 ~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          213 KIARPQEIANTILFLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             ---CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            467999999999999987543 45799999988643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.73  E-value=2.8e-17  Score=150.31  Aligned_cols=194  Identities=15%  Similarity=0.202  Sum_probs=135.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ++|++|||    ||+|+||++++++|+++|++|++++|.. +....+.       .++.  ..++.++.+|   .+++.+
T Consensus         3 ~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~d~~~v~~   71 (246)
T 3osu_A            3 MTKSALVT----GASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV-------EEIKAKGVDSFAIQANVADADEVKA   71 (246)
T ss_dssp             CSCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHH
Confidence            35789999    9999999999999999999999988754 2221110       1111  1345667777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+....  
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  149 (246)
T 3osu_A           72 MIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP--  149 (246)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC--
Confidence            66532     47999999994                    466677777776    556667999999987654321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|...|...+            .|++++.|+||.++++.... ....+...+..+.++.        
T Consensus       150 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~--------  210 (246)
T 3osu_A          150 ----------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPLA--------  210 (246)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTTC--------
T ss_pred             ----------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCCC--------
Confidence                      1245666554222            38999999999999885433 2344455555555543        


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       .+.+++|+|++++.++.+... .+|++|++.+|.
T Consensus       211 -r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          211 -RFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             -SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             -CCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence             345789999999999886644 557999999875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.73  E-value=3.9e-17  Score=149.44  Aligned_cols=196  Identities=17%  Similarity=0.142  Sum_probs=131.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ...+++||||    ||+|+||++++++|+++|++|++++|+.++...+        .......+.++.+|   .+++.++
T Consensus        11 ~~~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~   78 (249)
T 3f9i_A           11 DLTGKTSLIT----GASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL--------GNALKDNYTIEVCNLANKEECSNL   78 (249)
T ss_dssp             CCTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHH
T ss_pred             cCCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhccCccEEEcCCCCHHHHHHH
Confidence            3457899999    9999999999999999999999999987544321        11112356677777   6777777


Q ss_pred             hcCC-cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCCC
Q 015746          148 VGGV-TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       148 ~~~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      ++.. ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....       
T Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  151 (249)
T 3f9i_A           79 ISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP-------  151 (249)
T ss_dssp             HHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS-------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC-------
Confidence            7755 48999999993                    355555665554    445566999999988764321       


Q ss_pred             CCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                           ....|++.|...+            .|+++.+++||.+.++.... ........+..+.+.         ..+.+
T Consensus       152 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~  216 (249)
T 3f9i_A          152 -----GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK-LNEKQREAIVQKIPL---------GTYGI  216 (249)
T ss_dssp             -----CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-------CCHHHHHHHHHHCTT---------CSCBC
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc-cCHHHHHHHHhcCCC---------CCCcC
Confidence                 1245666554322            37899999999998874332 112223333333222         34668


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ++|+|++++.++.+... ..|++|++.+|..
T Consensus       217 ~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          217 PEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence            99999999999987644 4579999998853

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.72  E-value=1.7e-17  Score=154.83  Aligned_cols=208  Identities=17%  Similarity=0.163  Sum_probs=129.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+. +....+..    .+.......+.++.+|   .+++.++
T Consensus        23 l~~k~~lVT----Gas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           23 MMTKTAVIT----GSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD----EVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHH----HHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHH----HHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            456899999    9999999999999999999999999854 22211100    0111112356667777   5666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....   
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  171 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP---  171 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC---
Confidence            5532     47999999994                    455666666665    555667999999987764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHH-HHHHcCCC-cccCCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFF-DRIVRKRP-VPIPGSGMQ  264 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~  264 (401)
                               ....|++.|...+            .|+++..|+||.++++........... ..+..... ...+.++..
T Consensus       172 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  242 (281)
T 3v2h_A          172 ---------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQP  242 (281)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCT
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCC
Confidence                     1245666664322            389999999999998743221000000 00000000 012233444


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ...+++++|+|++++.++.+... ..|+++++.+|.
T Consensus       243 ~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          243 TKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             TCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             CCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            56788999999999999987654 567999999874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.72  E-value=9.6e-18  Score=153.16  Aligned_cols=197  Identities=12%  Similarity=0.137  Sum_probs=128.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.......+.++.+|   .+++.++++
T Consensus         6 ~~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            6 QGKVSLVT----GSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAE----EIANKYGVKAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH----HHHhhcCCceEEEEccCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999997654322110    0000012356677777   666666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+....     
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  152 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV-----  152 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT-----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC-----
Confidence            21     47999999984                    34455    3444455556778999999976543221     


Q ss_pred             CCCCCCCCCChHHHHHH-----HHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKY-----ISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~-----~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|...|.     .+.       .+++++++|||.++++.... ....+...+....+.         ..+
T Consensus       153 -------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~  215 (248)
T 2pnf_A          153 -------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIPL---------GRF  215 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT---------SSC
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCCC---------CCc
Confidence                   1134554443     221       37899999999999875322 112222222222221         246


Q ss_pred             eeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      ++++|+|++++.++.... ...|++|++.++.
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          216 GSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            799999999999997653 3447999998874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.72  E-value=1.8e-17  Score=153.02  Aligned_cols=200  Identities=17%  Similarity=0.195  Sum_probs=134.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++......    .+......++.++.+|   .+++.+++
T Consensus         8 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            8 LQGRSVVVT----GGTKGIGRGIATVFARAGANVAVAGRSTADIDACVA----DLDQLGSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998765432110    0111111356777777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccc-cCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIY-KPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy-~~~~~~~  198 (401)
                      +..     ++|++||+||.                    |+.++.++++++..    .+..+||++||...+ ...    
T Consensus        80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----  155 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY----  155 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC----
Confidence            432     47999999994                    45566666665544    466799999997653 211    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                              +....|.+.|...+            .|+++..|+||.++++.... ....+...+....+..         
T Consensus       156 --------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~---------  217 (262)
T 3pk0_A          156 --------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPAG---------  217 (262)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTTS---------
T ss_pred             --------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCCC---------
Confidence                    11245665553322            48999999999998873211 1123344444444432         


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+.+++|+|++++.++.+... ..|+++++.+|..+
T Consensus       218 r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          218 ALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            245899999999999876543 56899999998654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.72  E-value=2e-17  Score=153.27  Aligned_cols=195  Identities=17%  Similarity=0.169  Sum_probs=129.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++| +.+....+       ..++.  ..++.++.+|   .+++.
T Consensus        19 ~~~k~vlIt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~~~   87 (274)
T 1ja9_A           19 LAGKVALTT----GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV-------VAELKKLGAQGVAIQADISKPSEVV   87 (274)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH-------HHHHHhcCCcEEEEEecCCCHHHHH
Confidence            346899999    99999999999999999999999998 43322111       01111  2346677777   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCCEEEEecccccc-cCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIY-KPADE  196 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy-~~~~~  196 (401)
                      ++++..     ++|+|||+||.                    |+.++.++++++...   + ++||++||...+ .... 
T Consensus        88 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~-  165 (274)
T 1ja9_A           88 ALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIP-  165 (274)
T ss_dssp             HHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCC-
Confidence            666522     47999999984                    456777887777654   4 689999998877 3221 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC-----------CcH-HHHHHHHHc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK-----------DCE-EWFFDRIVR  252 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~-----------~~~-~~~~~~~~~  252 (401)
                                 ....|...|...+            .+++++++|||.++++....           ... ..+...+..
T Consensus       166 -----------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (274)
T 1ja9_A          166 -----------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN  234 (274)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh
Confidence                       1234554443322            28999999999998762110           000 112222222


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +.         ....+++++|+|++++.++.++.. ..|++|++++|.
T Consensus       235 ~~---------~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          235 MN---------PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             TS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cC---------CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            22         224578999999999999986543 357999999874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.72  E-value=6.2e-17  Score=148.74  Aligned_cols=195  Identities=16%  Similarity=0.153  Sum_probs=129.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ...+.++.+|   .+++.+++
T Consensus         3 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~   70 (254)
T 1hdc_A            3 LSGKTVIIT----GGARGLGAEAARQAVAAGARVVLADVLDEEGAATA-------REL-GDAARYQHLDVTIEEDWQRVV   70 (254)
T ss_dssp             CCCSEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HTT-GGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCceeEEEecCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875433211       111 1245666677   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+....    
T Consensus        71 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  146 (254)
T 1hdc_A           71 AYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA----  146 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC----
Confidence            522     47999999984                    2233    34667777777778999999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|...|...+            .|+++++||||.++++.         .... .......+........
T Consensus       147 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~---------~~~~-~~~~~~~~~~~~p~~~  208 (254)
T 1hdc_A          147 --------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM---------TAET-GIRQGEGNYPNTPMGR  208 (254)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHH-TCCCSTTSCTTSTTSS
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc---------cccc-chhHHHHHHhcCCCCC
Confidence                    1245555553322            37899999999998862         1111 1110000111111223


Q ss_pred             ee-eHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          268 IA-HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       268 ~v-~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +. +++|+|++++.++.++.. ..|+++++.+|..
T Consensus       209 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence            66 899999999999986543 4579999998853

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.72  E-value=1.3e-17  Score=153.31  Aligned_cols=200  Identities=13%  Similarity=0.033  Sum_probs=121.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC--
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~--  151 (401)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.++...               .+.....|.+++.++++..  
T Consensus         1 mk~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~Dl~~~~~v~~~~~~~~~   61 (257)
T 1fjh_A            1 MSIIVIS----GCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------DLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------ccccCCCCHHHHHHHHHHhCC
Confidence            4689999    999999999999999999999999998754321               1222223477788888765  


Q ss_pred             cccEEEeCCCC-------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCCCCC-----C------
Q 015746          152 TFDVVLDNNGK-------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEG-----D------  203 (401)
Q Consensus       152 ~~d~Vv~~a~~-------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~~E~-----~------  203 (401)
                      ++|+|||+||.             |+.++.++++++.    +.+.++||++||...+......+..+.     +      
T Consensus        62 ~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             CCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            58999999995             3455666666554    566679999999988732111111000     0      


Q ss_pred             -----CCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          204 -----VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       204 -----~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                           ...+....|+..|...+            .|+++++|+||.+.++.................-       .....
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~  214 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF-------VPPMG  214 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C-------CCSTT
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhc-------ccccC
Confidence                 11111234555553322            3899999999999887432110000111111100       00112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+.+++|+|++++.++..+.. ..|+++++.+|.
T Consensus       215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            367899999999999986543 457999999875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.72  E-value=4e-17  Score=150.73  Aligned_cols=196  Identities=19%  Similarity=0.215  Sum_probs=129.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++. .++.++.+|   .+++.++++
T Consensus        11 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~-~~~~~~~~D~~d~~~v~~~~~   78 (263)
T 3ak4_A           11 SGRKAIVT----GGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV-------AGLE-NGGFAVEVDVTKRASVDAAMQ   78 (263)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HTCT-TCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHh-cCCeEEEEeCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999875433211       1111 156677777   566666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|+|||+||.                    |+.++.++++++.    +.+ ..+||++||...+...     
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  153 (263)
T 3ak4_A           79 KAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA-----  153 (263)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----
Confidence            32     47999999984                    3445555555543    345 5799999998876432     


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCc-----H-----HHHHHHHHcCCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDC-----E-----EWFFDRIVRKRPVP  257 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~-----~-----~~~~~~~~~~~~~~  257 (401)
                             +....|...|...         |   .|+++++||||.++++......     .     ......+....+  
T Consensus       154 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  224 (263)
T 3ak4_A          154 -------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP--  224 (263)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT--
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC--
Confidence                   1124555555322         2   3899999999999886321100     0     111111222211  


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                             ...+++++|+|++++.++.++.. ..|++|++.+|..+
T Consensus       225 -------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          225 -------LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             -------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             -------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence                   23477999999999999976543 45799999988543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.72  E-value=5.3e-17  Score=149.67  Aligned_cols=195  Identities=14%  Similarity=0.232  Sum_probs=127.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh----cCCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~~~~~  145 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.    ..++.++.+|   ++++.
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~v~   74 (260)
T 2z1n_A            6 QGKLAVVT----AGSSGLGFASALELARNGARLLLFSRNREKLEAAA-------SRIASLVSGAQVDIVAGDIREPGDID   74 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHSTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCCCeEEEEEccCCCHHHHH
Confidence            45789999    99999999999999999999999999875432211       1111    1156677777   56666


Q ss_pred             Hhhc----CCcccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          146 NVVG----GVTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       146 ~~~~----~~~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      ++++    ..++|+|||+||.                    |+.++    +.++..+++.+.++||++||...+....  
T Consensus        75 ~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  152 (260)
T 2z1n_A           75 RLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ--  152 (260)
T ss_dssp             HHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC--
Confidence            6665    1237999999994                    34444    5555566666778999999988875321  


Q ss_pred             CCCCCCCCCCCCChHHHHHH-----HH----H---hCCCeEEEecCeeecCCCCCC---------cHHHH-HHHHHcCCC
Q 015746          198 PHVEGDVVKPDAGHVQVEKY-----IS----E---NFSNWASFRPQYMIGSGNNKD---------CEEWF-FDRIVRKRP  255 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~-----~~----e---~g~~~~ilRp~~v~G~~~~~~---------~~~~~-~~~~~~~~~  255 (401)
                                ....|...|.     .+    +   .|+++++|+||.++++.....         ..... ...+.... 
T Consensus       153 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  221 (260)
T 2z1n_A          153 ----------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI-  221 (260)
T ss_dssp             ----------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CC-
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcC-
Confidence                      1134544442     22    2   389999999999998854310         00000 11111111 


Q ss_pred             cccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       256 ~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                              ....+.+++|+|++++.++..... ..|+++++.+|.
T Consensus       222 --------p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          222 --------PMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             --------TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             --------CCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence                    112367899999999999976543 457999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.72  E-value=1.5e-16  Score=146.39  Aligned_cols=196  Identities=12%  Similarity=0.104  Sum_probs=126.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|++|||    ||+|+||++++++|+++|++|++++|+.+.......       ++ ...+.++.+|   .+++.++++
T Consensus         6 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~Dv~~~~~v~~~~~   73 (257)
T 3tpc_A            6 KSRVFIVT----GASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA-------EL-GAAVRFRNADVTNEADATAALA   73 (257)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-------Hh-CCceEEEEccCCCHHHHHHHHH
Confidence            45789999    999999999999999999999999998876543221       11 2357777787   566666665


Q ss_pred             CC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC----------CCCEEEEeccccc
Q 015746          150 GV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS----------GVKQFLFISSAGI  190 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~----------gv~~~v~~SS~~v  190 (401)
                      ..     ++|++||+||.                        |+.++.++++++...          +..+||++||...
T Consensus        74 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tpc_A           74 FAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA  153 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence            32     47999999984                        345566666665542          3458999999887


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCccc
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI  258 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  258 (401)
                      +....            ....|.+.|..         .|   .|++++.|+||.+.++.... ....+...+....+.  
T Consensus       154 ~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~--  218 (257)
T 3tpc_A          154 FDGQI------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAASVPF--  218 (257)
T ss_dssp             HHCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSSS--
T ss_pred             ccCCC------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-CCHHHHHHHHhcCCC--
Confidence            65431            12456655532         22   48999999999998874322 111111222222221  


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCC
Q 015746          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (401)
Q Consensus       259 ~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t  302 (401)
                      .      ..+.+++|+|++++.+++. ...+|+++++.+|..++
T Consensus       219 ~------~r~~~~~dva~~v~~l~s~-~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          219 P------PRLGRAEEYAALVKHICEN-TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             S------CSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCC-
T ss_pred             C------CCCCCHHHHHHHHHHHccc-CCcCCcEEEECCCccCC
Confidence            1      2366899999999999986 44557999999987554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.72  E-value=8.4e-17  Score=148.39  Aligned_cols=192  Identities=17%  Similarity=0.192  Sum_probs=126.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++..          ..+...++.++.+|   .+++.+++
T Consensus        25 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~~~~~Dv~~~~~v~~~~   90 (260)
T 3gem_A           25 LSSAPILIT----GASQRVGLHCALRLLEHGHRVIISYRTEHASV----------TELRQAGAVALYGDFSCETGIMAFI   90 (260)
T ss_dssp             --CCCEEES----STTSHHHHHHHHHHHHTTCCEEEEESSCCHHH----------HHHHHHTCEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------HHHHhcCCeEEECCCCCHHHHHHHH
Confidence            346889999    99999999999999999999999999875431          12223357788888   55666655


Q ss_pred             cCC-----cccEEEeCCCC-------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK-------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~-------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +..     ++|+|||+||.                   |+.++.++++++    ++.+..+||++||...+....     
T Consensus        91 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  165 (260)
T 3gem_A           91 DLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS-----  165 (260)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS-----
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC-----
Confidence            432     47999999994                   345555555544    455667999999988764321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH---------h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE---------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e---------~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                             ....|.+.|...+         +  ++++..|+||.+.++....   ..+...+....+...         +.
T Consensus       166 -------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~~r---------~~  226 (260)
T 3gem_A          166 -------KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSALGI---------EP  226 (260)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCSCC---------CC
T ss_pred             -------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCCCC---------CC
Confidence                   1245666654322         2  5889999999998764321   112223333333322         34


Q ss_pred             eHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCC
Q 015746          270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t  302 (401)
                      .++|+|++++.+++. ....|+++++.+|..++
T Consensus       227 ~~edva~~v~~L~~~-~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          227 GAEVIYQSLRYLLDS-TYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             CTHHHHHHHHHHHHC-SSCCSCEEEESTTTTTC
T ss_pred             CHHHHHHHHHHHhhC-CCCCCCEEEECCCcccC
Confidence            689999999999853 33457999999987654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.71  E-value=5.3e-17  Score=149.35  Aligned_cols=198  Identities=15%  Similarity=0.094  Sum_probs=128.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.++ ...       ..++.  . .++.+|   .+++.++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~-------~~~~~--~-~~~~~D~~~~~~~~~~~~   69 (256)
T 2d1y_A            5 AGKGVLVT----GGARGIGRAIAQAFAREGALVALCDLRPEG-KEV-------AEAIG--G-AFFQVDLEDERERVRFVE   69 (256)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHH-------HHHHT--C-EEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHH-------HHHhh--C-CEEEeeCCCHHHHHHHHH
Confidence            46889999    999999999999999999999999998754 221       11111  2 566666   566666655


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+...      
T Consensus        70 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------  143 (256)
T 2d1y_A           70 EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE------  143 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC------
Confidence            32     47999999984                    345555665554    44567799999998765322      


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHH-cCCCcccCCCCcceee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIV-RKRPVPIPGSGMQFTN  267 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  267 (401)
                            +....|...|...+            .++++++++||.+.++.     ...++.... .......+........
T Consensus       144 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (256)
T 2d1y_A          144 ------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-----VLEAIALSPDPERTRRDWEDLHALRR  212 (256)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHC--------CHHHHTTSTTSS
T ss_pred             ------CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-----hhhccccccCCHHHHHHHHhcCCCCC
Confidence                  11245555553322            37899999999987652     111100001 1111111111222345


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      +++++|+|++++.++.++.. ..|++|++.+|..++
T Consensus       213 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          213 LGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            78999999999999987543 457999999986543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.71  E-value=5.7e-17  Score=149.86  Aligned_cols=199  Identities=16%  Similarity=0.155  Sum_probs=128.5

Q ss_pred             cccCeEEEEecCCCccc-cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHA-VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG-~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+| .||++++++|+++|++|++++|+.++......    .+......++.++.+|   .+++.++
T Consensus        20 l~~k~vlIT----Gasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (266)
T 3o38_A           20 LKGKVVLVT----AAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD----QLADLGLGRVEAVVCDVTSTEAVDAL   91 (266)
T ss_dssp             TTTCEEEES----SCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHH----HHHhcCCCceEEEEeCCCCHHHHHHH
Confidence            456899999    9998 59999999999999999999998755432111    1111122467788888   5666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----C-CCCEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----S-GVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~-gv~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|+|||+||.                    |+.++.++++++..    . +..+||++||...+....  
T Consensus        92 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--  169 (266)
T 3o38_A           92 ITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH--  169 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT--
T ss_pred             HHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC--
Confidence            5533     57999999994                    45556666665544    3 456899999987764321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|.+.|...+            .|+++..|+||.+.++.............+...         ...
T Consensus       170 ----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~  230 (266)
T 3o38_A          170 ----------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASD---------EAF  230 (266)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------C---------CTT
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhc---------CCc
Confidence                      1245665553322            389999999999987743221111112222222         222


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       231 ~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          231 GRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             CCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            4467899999999999986543 567999999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.71  E-value=2.9e-17  Score=151.12  Aligned_cols=202  Identities=13%  Similarity=0.149  Sum_probs=135.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.. ....+.++.+|   .+++.+++
T Consensus        10 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~d~~~v~~~~   80 (256)
T 3gaf_A           10 LNDAVAIVT----GAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAA----AIRQ-AGGKAIGLECNVTDEQHREAVI   80 (256)
T ss_dssp             CTTCEEEEC----SCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HHHH-TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCcEEEEECCCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998754432110    0000 12356677777   56666665


Q ss_pred             cCC-----cccEEEeCCCC-------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK-------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~-------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +..     ++|++||+||.                   |+.++.++++++    ++.+..+||++||...+....     
T Consensus        81 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  155 (256)
T 3gaf_A           81 KAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV-----  155 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC-----
Confidence            532     47999999994                   455566666654    455667999999988764321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|.+.|...+            .|+++..|+||.+.++.............+....++         ..+
T Consensus       156 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~---------~r~  219 (256)
T 3gaf_A          156 -------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL---------GRL  219 (256)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT---------SSC
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC---------CCC
Confidence                   1255666653322            378999999999987621110011223333333332         335


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCH
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~  303 (401)
                      .+++|+|++++.++..... ..|+++++.+|...++
T Consensus       220 ~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          220 GEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             CCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence            6899999999999986543 5679999999976654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.71  E-value=3.4e-17  Score=150.12  Aligned_cols=196  Identities=12%  Similarity=0.154  Sum_probs=128.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D---~~~~~~~~  148 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ...+ .++.+|   .+++.+++
T Consensus        10 ~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~~D~~~~~~~~~~~   77 (254)
T 2wsb_A           10 DGACAAVT----GAGSGIGLEICRAFAASGARLILIDREAAALDRAA-------QEL-GAAVAARIVADVTDAEAMTAAA   77 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-GGGEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-cccceeEEEEecCCHHHHHHHH
Confidence            45789999    99999999999999999999999999875432210       111 1234 566777   56666665


Q ss_pred             cC----CcccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          149 GG----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~----~~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +.    .++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+......   
T Consensus        78 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---  154 (254)
T 2wsb_A           78 AEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ---  154 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS---
T ss_pred             HHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC---
Confidence            32    247999999984                    3444    3344445556677899999998876532111   


Q ss_pred             CCCCCCCCCChHHHHHHH-----HH-------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceee
Q 015746          201 EGDVVKPDAGHVQVEKYI-----SE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~-----~e-------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                             ....|...|..     +.       .|++++++|||.++++..... ....+...+....+.         ..
T Consensus       155 -------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~  218 (254)
T 2wsb_A          155 -------FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM---------GR  218 (254)
T ss_dssp             -------CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT---------SS
T ss_pred             -------cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC---------CC
Confidence                   01345544432     22       289999999999998732110 001223333333221         34


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +++++|+|++++.++.+... ..|+++++.+|.
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          219 CGEPSEIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence            67999999999999976533 457999998874

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.71  E-value=2.1e-16  Score=146.44  Aligned_cols=189  Identities=15%  Similarity=0.226  Sum_probs=128.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+....               .+..+.+|   .+++.++
T Consensus        11 ~~~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A           11 EFTDKVAIVT----GGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN---------------VSDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             TTTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCC--CTT---------------SSEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC---------------ceeEEEecCCCHHHHHHH
Confidence            3457899999    999999999999999999999999998754321               34455566   6666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...|....   
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  148 (269)
T 3vtz_A           72 VEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK---  148 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC---
Confidence            6532     47999999994                    455555555544    445667999999988875431   


Q ss_pred             CCCCCCCCCCCChHHHHHHHH---------Hh--CCCeEEEecCeeecCCCC----------CCcHHHHHHHHHcCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS---------EN--FSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~---------e~--g~~~~ilRp~~v~G~~~~----------~~~~~~~~~~~~~~~~~~  257 (401)
                               ....|.+.|...         |.  ++++..|+||.++++...          ..........+....+. 
T Consensus       149 ---------~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-  218 (269)
T 3vtz_A          149 ---------NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-  218 (269)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT-
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC-
Confidence                     124566655332         23  788999999999876211          00111222222222222 


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                              ..+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       219 --------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          219 --------GRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             --------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --------CCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence                    3456899999999999986644 568999999885

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.71  E-value=7.4e-17  Score=148.10  Aligned_cols=198  Identities=16%  Similarity=0.204  Sum_probs=128.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ..++.++.+|   .+++.+++
T Consensus         4 l~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~   71 (253)
T 1hxh_A            4 LQGKVALVT----GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA-------AEL-GERSMFVRHDVSSEADWTLVM   71 (253)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHH-CTTEEEECCCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHc-CCceEEEEccCCCHHHHHHHH
Confidence            456899999    99999999999999999999999999865432211       111 2356667777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+    ..++.++..+++.+ ++||++||...+....    
T Consensus        72 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----  146 (253)
T 1hxh_A           72 AAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE----  146 (253)
T ss_dssp             HHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC----
Confidence            542     47999999994                    12    24456666777777 8999999988775321    


Q ss_pred             CCCCCCCCCCChHHHHHH-----HHH-------h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKY-----ISE-------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~-----~~e-------~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                              ....|...|.     .+.       .  |+++++||||+++++.........+.........     .....
T Consensus       147 --------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~p~  213 (253)
T 1hxh_A          147 --------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP-----KLNRA  213 (253)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT-----TTBTT
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhh-----ccCcc
Confidence                    1234554443     222       3  8999999999999873110000000011011100     01112


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+.+++|+|++++.++.++.. ..|+++++.+|.
T Consensus       214 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          214 GRAYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             CCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            3478999999999999987543 457999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.70  E-value=5e-17  Score=149.92  Aligned_cols=190  Identities=19%  Similarity=0.215  Sum_probs=128.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++. ..+.++.+|   ++++.+++
T Consensus         5 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~-~~~~~~~~D~~~~~~v~~~~   72 (260)
T 1nff_A            5 LTGKVALVS----GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA-------AELA-DAARYVHLDVTQPAQWKAAV   72 (260)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHTG-GGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHhh-cCceEEEecCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875433211       1111 135666777   66666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+....    
T Consensus        73 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  148 (260)
T 1nff_A           73 DTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----  148 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC----
Confidence            522     47999999994                    23344    4556666666778999999988765321    


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|...|...         |   .|+++++||||.++++....           ....+  .  ......
T Consensus       149 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~--~--~~~~~~  205 (260)
T 1nff_A          149 --------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW-----------VPEDI--F--QTALGR  205 (260)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT-----------SCTTC--S--CCSSSS
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc-----------chhhH--H--hCccCC
Confidence                    113455444322         2   48999999999999874220           00000  0  111234


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +.+++|+|++++.++..... ..|++|++.++..
T Consensus       206 ~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          206 AAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            67899999999999976543 4579999998853

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.70  E-value=1.2e-17  Score=153.90  Aligned_cols=199  Identities=15%  Similarity=0.197  Sum_probs=130.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++.....       .++.  ...+.++.+|   .+++.+
T Consensus        12 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~   80 (260)
T 2zat_A           12 LENKVALVT----ASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-------ATLQGEGLSVTGTVCHVGKAEDRER   80 (260)
T ss_dssp             TTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHH
Confidence            346899999    99999999999999999999999999875432210       1111  1245666777   556666


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||+||.                     |+.++.+++++    +++.+.++||++||...|.... 
T Consensus        81 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  159 (260)
T 2zat_A           81 LVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP-  159 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC-
Confidence            55522     47999999984                     34445455554    4456778999999998875421 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH-----HH-------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYI-----SE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~-----~e-------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                 ....|...|..     +.       .|+++++|+||.+.++...... .......+...         .
T Consensus       160 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~  219 (260)
T 2zat_A          160 -----------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES---------L  219 (260)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH---------H
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc---------C
Confidence                       12445555432     22       2899999999999887421100 00001111111         1


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      ....+.+++|+|++++.++.++.. ..|++|++.+|..++
T Consensus       220 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          220 RIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             TCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            123467999999999999876543 457999999998665

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.70  E-value=1.1e-16  Score=148.59  Aligned_cols=197  Identities=16%  Similarity=0.200  Sum_probs=128.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++.....       .++.  ..++.++.+|   ++++.+
T Consensus        19 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   87 (273)
T 1ae1_A           19 LKGTTALVT----GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-------EIWREKGLNVEGSVCDLLSRTERDK   87 (273)
T ss_dssp             CTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEECCCCCHHHHHH
Confidence            346899999    99999999999999999999999999875432210       1111  1356677777   556665


Q ss_pred             hhcC------CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGG------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~------~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++.      -++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.... 
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-  166 (273)
T 1ae1_A           88 LMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP-  166 (273)
T ss_dssp             HHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC-
Confidence            5532      247999999994                    355566666655    445667999999998875421 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc-----HHHHHHHHHcCCCcccC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~  259 (401)
                                 ....|...|...+            .|+++++|+||.++++......     ...+...+....+.   
T Consensus       167 -----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---  232 (273)
T 1ae1_A          167 -----------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---  232 (273)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---
Confidence                       1245555553322            3899999999999988532110     01122223222221   


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                            ..+.+++|+|++++.++..... ..|+++++.+|..
T Consensus       233 ------~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          233 ------GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             ------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ------CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence                  2356899999999999875543 4579999998853

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.70  E-value=1.4e-16  Score=147.37  Aligned_cols=193  Identities=16%  Similarity=0.150  Sum_probs=129.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+......             .+.....|.+++.++++..
T Consensus        26 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------------~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           26 FEGKVALVT----GAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------------HLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-------------ECCCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-------------ccCcCCCCHHHHHHHHHHH
Confidence            456899999    99999999999999999999999999875543210             0111222455555554421


Q ss_pred             -----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCCC
Q 015746          152 -----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       152 -----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                           ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....       
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------  161 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGP-------  161 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCT-------
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC-------
Confidence                 47999999994                    456666777766    566667999999987764321       


Q ss_pred             CCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC------CcHHHHHHHHHcCCCcccCCCCcc
Q 015746          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK------DCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                           ....|.+.|...+            .|+++++|+||.++++....      .........+....+         
T Consensus       162 -----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p---------  227 (266)
T 3uxy_A          162 -----GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP---------  227 (266)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST---------
T ss_pred             -----CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC---------
Confidence                 1245665553322            28999999999998762110      001111222222222         


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      ...+.+++|+|++++.++.+... .+|+++++.+|..++
T Consensus       228 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          228 LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            23466899999999999987643 567999999987653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.70  E-value=6.3e-17  Score=147.70  Aligned_cols=193  Identities=14%  Similarity=0.190  Sum_probs=121.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .+|+||||    ||+|+||++++++|+++|++|+++ .|+.+....+.       .++.  ..++.++.+|   ++++.+
T Consensus         4 ~~~~vlIt----GasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T 2hq1_A            4 KGKTAIVT----GSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-------EEFKAAGINVVVAKGDVKNPEDVEN   72 (247)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-------HHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHH
Confidence            45899999    999999999999999999999999 45543322110       1111  2356677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccc-cccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAG-IYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~-vy~~~~~  196 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++.    +.+.++||++||.. .|+... 
T Consensus        73 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  151 (247)
T 2hq1_A           73 MVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG-  151 (247)
T ss_dssp             HHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-
Confidence            66532     47999999983                    4556555555543    45677999999974 444321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH-----HH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYI-----SE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~-----~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                  ...|...|..     +.       .++++++++||.+.++.... ....+...+..+.+         
T Consensus       152 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------  209 (247)
T 2hq1_A          152 ------------QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNIP---------  209 (247)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTST---------
T ss_pred             ------------CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhCC---------
Confidence                        2445555532     22       27899999999987752111 11122222333222         


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ...+++++|+|++++.++..+.. ..|++|++++|.
T Consensus       210 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          210 LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            13467999999999999876543 457999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.70  E-value=1.8e-17  Score=152.81  Aligned_cols=198  Identities=16%  Similarity=0.192  Sum_probs=130.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+....+       ..++.  ..++.++.+|   ++++.+
T Consensus         7 l~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   75 (260)
T 2ae2_A            7 LEGCTALVT----GGSRGIGYGIVEELASLGASVYTCSRNQKELNDC-------LTQWRSKGFKVEASVCDLSSRSERQE   75 (260)
T ss_dssp             CTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------HHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-------HHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            346899999    9999999999999999999999999987543221       11111  1245667777   566666


Q ss_pred             hhcC------CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGG------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~------~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++.      -++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+...  
T Consensus        76 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  153 (260)
T 2ae2_A           76 LMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV--  153 (260)
T ss_dssp             HHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC--
Confidence            6532      248999999993                    455566666665    45667799999998876432  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC---C-cHHHHHHHHHcCCCcccCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK---D-CEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~---~-~~~~~~~~~~~~~~~~~~~  260 (401)
                                +....|...|...+            .|+++++|+||.++++....   . .....+..+....+     
T Consensus       154 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----  218 (260)
T 2ae2_A          154 ----------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA-----  218 (260)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST-----
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC-----
Confidence                      11244555553322            27899999999998762100   0 00000112222221     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                          ...+.+++|+|++++.++..... ..|+++++.+|..+
T Consensus       219 ----~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          219 ----LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             ----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ----CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence                23467999999999999876543 45799999988643

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.70  E-value=6.8e-17  Score=148.48  Aligned_cols=198  Identities=15%  Similarity=0.145  Sum_probs=129.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+.  .       ...++.  ..++.++.+|   .+++.++
T Consensus         3 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~--~-------~~~~l~~~~~~~~~~~~D~~~~~~v~~~   69 (255)
T 2q2v_A            3 KGKTALVT----GSTSGIGLGIAQVLARAGANIVLNGFGDPA--P-------ALAEIARHGVKAVHHPADLSDVAQIEAL   69 (255)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEECSSCCH--H-------HHHHHHTTSCCEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCchH--H-------HHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            46899999    999999999999999999999999997641  1       011111  1245566666   6667766


Q ss_pred             hcCC-----cccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+||.                    |+.    .++.++..+++.+.++||++||...+....   
T Consensus        70 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  146 (255)
T 2q2v_A           70 FALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST---  146 (255)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC---
Confidence            6522     47999999984                    222    455666677777878999999988765321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHH-HHHcCCCc----ccC-C
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRPV----PIP-G  260 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~~~~~----~~~-~  260 (401)
                               ....|...|...         |   .|+++++|+||.++++...     .+.. ....+...    ..+ .
T Consensus       147 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~  212 (255)
T 2q2v_A          147 ---------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ-----KQIDDRAANGGDPLQAQHDLLA  212 (255)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH-----HHHHHHHHHTCCHHHHHHHHHT
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh-----hhcccccccccchHHHHHHHHh
Confidence                     124455555332         2   2789999999999887321     1110 00000000    001 1


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      .......+++++|+|++++.++.++.. ..|++|++.++..
T Consensus       213 ~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          213 EKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             TTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            122234578999999999999876543 4579999998753

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.70  E-value=3.9e-17  Score=149.42  Aligned_cols=197  Identities=16%  Similarity=0.161  Sum_probs=130.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++. ..++.++.+|   .+++.++
T Consensus         4 ~~~k~vlVt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~   72 (251)
T 1zk4_A            4 LDGKVAIIT----GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-------KSVGTPDQIQFFQHDSSDEDGWTKL   72 (251)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHCCTTTEEEEECCTTCHHHHHHH
T ss_pred             CCCcEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHhhccCceEEEECCCCCHHHHHHH
Confidence            456899999    99999999999999999999999999865432211       0110 0356777777   5666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCC-CEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGV-KQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|+|||+||.                    |+.    .++.+++.+++.+. ++||++||...+....  
T Consensus        73 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--  150 (251)
T 1zk4_A           73 FDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--  150 (251)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC--
Confidence            6542     47999999984                    222    34556666777777 7999999988765421  


Q ss_pred             CCCCCCCCCCCCChHHHHH-----HHH---------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          198 PHVEGDVVKPDAGHVQVEK-----YIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek-----~~~---------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                ....|...|     +.+         ..+++++++|||+++++..... .........        ....
T Consensus       151 ----------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~--------~~~~  211 (251)
T 1zk4_A          151 ----------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEEAMSQ--------RTKT  211 (251)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHHHHTS--------TTTC
T ss_pred             ----------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-CchhhhHHH--------hhcC
Confidence                      124455444     222         2378999999999998732110 001011100        1111


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ....+++++|+|++++.++.+... ..|+++++.+|..
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          212 PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            123478999999999999976543 4579999998753

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.70  E-value=1.4e-16  Score=148.40  Aligned_cols=198  Identities=12%  Similarity=0.151  Sum_probs=132.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+....+.        ......+.++.+|   .+++.+++
T Consensus        25 l~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           25 LNQRVCIVT----GGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA--------NEIGSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHH
Confidence            456899999    99999999999999999999999999875443211        1112356677777   66666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....    
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  168 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA----  168 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC----
Confidence            532     47999999994                    455555555544    555667999999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCC-----CCcHHHHHHHHHcCCCcccCCCC
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  262 (401)
                              ....|.+.|...+            .|+++..|+||.+.++...     ..........+....+       
T Consensus       169 --------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-------  233 (277)
T 4dqx_A          169 --------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV-------  233 (277)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST-------
T ss_pred             --------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc-------
Confidence                    1245666553322            2799999999999775200     0000111111222222       


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                        ...+.+++|+|++++.++.+... ..|+++++.+|..++
T Consensus       234 --~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          234 --MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             --ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence              23456899999999999986654 567999999987543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.70  E-value=9e-17  Score=147.23  Aligned_cols=190  Identities=16%  Similarity=0.149  Sum_probs=128.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-HhhHHHhhc
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVG  149 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~~  149 (401)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+...           ++  ..+.++ +| .+++..+++
T Consensus        16 ~~~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~--~~~~~~-~D~~~~~~~~~~   77 (249)
T 1o5i_A           16 GIRDKGVLVL----AASRGIGRAVADVLSQEGAEVTICARNEELLK-----------RS--GHRYVV-CDLRKDLDLLFE   77 (249)
T ss_dssp             CCTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-----------HT--CSEEEE-CCTTTCHHHHHH
T ss_pred             ccCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-----------hh--CCeEEE-eeHHHHHHHHHH
Confidence            3457899999    99999999999999999999999999863221           11  134445 67 345665555


Q ss_pred             CC-cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC
Q 015746          150 GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       150 ~~-~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      .. ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...|....         
T Consensus        78 ~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  148 (249)
T 1o5i_A           78 KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE---------  148 (249)
T ss_dssp             HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             HhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC---------
Confidence            43 57999999984                    2222    44667777777778999999998875421         


Q ss_pred             CCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHH-HHHcCCCcccCCCCcceeeeeeH
Q 015746          205 VKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                         ....|...|...+            .|+++++|+||.++++.... ....+.. .+....+.         ..+.++
T Consensus       149 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p~---------~~~~~~  215 (249)
T 1o5i_A          149 ---NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIPM---------RRMAKP  215 (249)
T ss_dssp             ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTSTT---------SSCBCH
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCCC---------CCCcCH
Confidence               1244554443222            48999999999999874211 0011122 22222221         346799


Q ss_pred             HHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +|+|++++.++.+... ..|++|++.+|..
T Consensus       216 ~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          216 EEIASVVAFLCSEKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999999999876543 4579999998853

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=7.2e-17  Score=147.50  Aligned_cols=194  Identities=11%  Similarity=0.098  Sum_probs=129.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++...+.        ++  .++.++.+|   ++++.+++
T Consensus         4 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~--~~~~~~~~D~~~~~~~~~~~   69 (246)
T 2ag5_A            4 LDGKVIILT----AAAQGIGQAAALAFAREGAKVIATDINESKLQELE--------KY--PGIQTRVLDVTKKKQIDQFA   69 (246)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG--------GS--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------hc--cCceEEEeeCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875443221        11  156677777   56666665


Q ss_pred             cCC-cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                      +.. ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+....        
T Consensus        70 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  141 (246)
T 2ag5_A           70 NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV--------  141 (246)
T ss_dssp             HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------
T ss_pred             HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC--------
Confidence            433 47999999994                    344555555554    345667999999987654321        


Q ss_pred             CCCCCCChHHHHHHHH-----H-------hCCCeEEEecCeeecCCCCCCc-----HHHHHHHHHcCCCcccCCCCccee
Q 015746          204 VVKPDAGHVQVEKYIS-----E-------NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~-----e-------~g~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                         +....|...|...     .       .|+++++||||+++++......     .......+....+.         .
T Consensus       142 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  209 (246)
T 2ag5_A          142 ---VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------G  209 (246)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------S
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC---------C
Confidence               0124455554332     2       2899999999999987321100     01112222222221         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+.+++|+|++++.++.++.. ..|+++++.+|.
T Consensus       210 ~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          210 RFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             SCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            367999999999999976543 457999999874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.70  E-value=5.8e-17  Score=149.62  Aligned_cols=201  Identities=16%  Similarity=0.164  Sum_probs=132.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+........   .... ...++.++.+|   .+++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~Dl~~~~~v~~~~~   77 (264)
T 3i4f_A            6 FVRHALIT----AGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKE---TYKD-VEERLQFVQADVTKKEDLHKIVE   77 (264)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH---HTGG-GGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCEEEEe----CCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH---HHHh-cCCceEEEEecCCCHHHHHHHHH
Confidence            46789999    9999999999999999999999998876432110000   0001 12356777787   566666665


Q ss_pred             CC-----cccEEEeCCCC----------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ..     ++|+|||+||.                      |+.++.++++++    ++.+..+||++||.+.+.....  
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--  155 (264)
T 3i4f_A           78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW--  155 (264)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC--
T ss_pred             HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC--
Confidence            32     57999999992                      455666777766    6667779999999866532211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                              +....|.+.|...+            .|+++++|+||.++++..... ............+         ..
T Consensus       156 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p---------~~  217 (264)
T 3i4f_A          156 --------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHNTP---------IG  217 (264)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhcCC---------CC
Confidence                    11245665553322            389999999999999854332 2222222222222         23


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+.+++|+|++++.++.+... ..|+++++.+|...
T Consensus       218 r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          218 RSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             CCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            456899999999999987644 55799999998643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.70  E-value=9e-17  Score=147.78  Aligned_cols=201  Identities=13%  Similarity=0.111  Sum_probs=137.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ..++.++.+|   .+++.+++
T Consensus         6 l~gk~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~   73 (255)
T 4eso_A            6 YQGKKAIVI----GGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR-------EEF-GPRVHALRSDIADLNEIAVLG   73 (255)
T ss_dssp             TTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-GGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCcceEEEccCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875443211       111 2356777777   55555555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +..     ++|++||+||.                    |+.++.++++++...  .-.+||++||...+....      
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  147 (255)
T 4eso_A           74 AAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP------  147 (255)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT------
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC------
Confidence            432     48999999984                    566777888887654  124899999988765321      


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccCCCCcc
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                            ....|.+.|...+            .|+++..|+||.+.++.....     ....+........+.        
T Consensus       148 ------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~--------  213 (255)
T 4eso_A          148 ------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM--------  213 (255)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT--------
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC--------
Confidence                  1255666554322            289999999999998753221     111122222222332        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHH
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~e  305 (401)
                       ..+.+++|+|++++.++.+....+|+++++.+|...++.+
T Consensus       214 -~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          214 -KRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             -SSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             -CCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence             2345899999999999887444568999999997666543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.70  E-value=3.6e-17  Score=149.00  Aligned_cols=193  Identities=14%  Similarity=0.165  Sum_probs=126.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchh--cCCCeE-EEcC---HhhHHH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKT-VWGD---PAEVGN  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~--~~~~~~-~~~D---~~~~~~  146 (401)
                      +|+||||    ||+|+||++++++|+++|++|+++ +|+.++...+.       .++.  ...+.. +.+|   .+++.+
T Consensus         1 ~k~vlIT----GasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (245)
T 2ph3_A            1 MRKALIT----GASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA-------EEARRRGSPLVAVLGANLLEAEAATA   69 (245)
T ss_dssp             CCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH-------HHHHHTTCSCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhcCCceEEEEeccCCCHHHHHH
Confidence            4789999    999999999999999999999998 77654332110       1111  123445 6666   556666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+....  
T Consensus        70 ~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--  147 (245)
T 2ph3_A           70 LVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP--  147 (245)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS--
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC--
Confidence            55421     47999999984                    2344    55666667677778999999986543221  


Q ss_pred             CCCCCCCCCCCCChHHHHHH-----HH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKY-----IS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~-----~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|...|.     .+    +   .+++++++|||.++++.... ....+...+....+.         
T Consensus       148 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------  207 (245)
T 2ph3_A          148 ----------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIPA---------  207 (245)
T ss_dssp             ----------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCTT---------
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCCC---------
Confidence                      1134554443     22    2   28999999999998873221 112223333332221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+++++|+|++++.++.++.. ..|++|++.++.
T Consensus       208 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          208 GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            3467999999999999976533 457999999875

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.70  E-value=2.9e-16  Score=147.19  Aligned_cols=205  Identities=12%  Similarity=0.021  Sum_probs=136.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++......       ++ ..++.++.+|   .+++.+++
T Consensus        14 l~gk~vlVT----Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~Dl~d~~~v~~~~   81 (291)
T 3rd5_A           14 FAQRTVVIT----GANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR-------TM-AGQVEVRELDLQDLSSVRRFA   81 (291)
T ss_dssp             CTTCEEEEE----CCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-------TS-SSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------Hh-cCCeeEEEcCCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998765443211       11 2356777777   67788887


Q ss_pred             cCC-cccEEEeCCCC------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC-CCCCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPD  208 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~-~~~~~E~~~~~~~  208 (401)
                      +.. ++|+|||+||.                  |+.++.++++++.....++||++||...+.... ..+..++....+.
T Consensus        82 ~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~  161 (291)
T 3rd5_A           82 DGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSP  161 (291)
T ss_dssp             HTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCH
T ss_pred             HhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCC
Confidence            765 68999999994                  578889999999888777999999988775432 1112222111222


Q ss_pred             CChHHHHHHHHH------------hC--CCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          209 AGHVQVEKYISE------------NF--SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       209 ~~~~~~ek~~~e------------~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                      ...|+..|...+            .|  ++++.|+||.|..+..... ...+...+ ...+..        +-..+++|+
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~-~~~~~~--------~~~~~~~~~  231 (291)
T 3rd5_A          162 WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDAL-MSAATR--------VVATDADFG  231 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHH-HHHHHH--------HHhCCHHHH
Confidence            245666664433            25  8899999999977643221 01111111 111111        122369999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          275 SSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      |+.++.++.++ ..+|+.+++.+|.
T Consensus       232 A~~~~~l~~~~-~~~G~~~~vdgG~  255 (291)
T 3rd5_A          232 ARQTLYAASQD-LPGDSFVGPRFGY  255 (291)
T ss_dssp             HHHHHHHHHSC-CCTTCEEEETTSS
T ss_pred             HHHHHHHHcCC-CCCCceeCCcccc
Confidence            99999999885 4557999987653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.70  E-value=1.8e-16  Score=145.90  Aligned_cols=201  Identities=13%  Similarity=0.172  Sum_probs=134.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++......    .+.. ....+.++.+|   .+++.+++
T Consensus         4 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~~~~~v~~~~   74 (257)
T 3imf_A            4 MKEKVVIIT----GGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKL----EIEQ-FPGQILTVQMDVRNTDDIQKMI   74 (257)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHCC-STTCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCcEEEEEccCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998765432211    0000 11356677777   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH-----HhCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA-----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa-----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||+||.                    |+.++.++++++     ++.+..+||++||...+....   
T Consensus        75 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  151 (257)
T 3imf_A           75 EQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP---  151 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC---
Confidence            532     47999999993                    456666666665     444456899999988764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHH---------H----HhCCCeEEEecCeeecCCCCCCc--HHHHHHHHHcCCCcccCCCCc
Q 015746          199 HVEGDVVKPDAGHVQVEKYI---------S----ENFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~---------~----e~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  263 (401)
                               ....|.+.|..         .    ..|++++.|+||.++++......  ...+...+....+.       
T Consensus       152 ---------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~-------  215 (257)
T 3imf_A          152 ---------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPL-------  215 (257)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTT-------
T ss_pred             ---------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCC-------
Confidence                     12445544422         1    34899999999999987532210  00111222222221       


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                        ..+.+++|+|++++.++.+... .+|+++++.+|..+.
T Consensus       216 --~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          216 --GRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             --CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence              2356899999999999987653 568999999987554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.69  E-value=3.1e-17  Score=152.72  Aligned_cols=195  Identities=20%  Similarity=0.250  Sum_probs=129.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ..++.++.+|   .+++.+
T Consensus        20 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~~~~~v~~   88 (277)
T 2rhc_B           20 QDSEVALVT----GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-------KELREAGVEADGRTCDVRSVPEIEA   88 (277)
T ss_dssp             TTSCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEECCCCCHHHHHH
Confidence            345789999    99999999999999999999999999875432210       1111  1246667777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC------CCCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS------GVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~------gv~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++...      +.++||++||...+... 
T Consensus        89 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-  167 (277)
T 2rhc_B           89 LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-  167 (277)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC-
Confidence            55431     47999999984                    456677777776554      55799999998765322 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcH-----------HHHHHHHHc
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVR  252 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~-----------~~~~~~~~~  252 (401)
                                 +....|...|...         |   .|+++++|+||.++++.... ..           ......+..
T Consensus       168 -----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~  235 (277)
T 2rhc_B          168 -----------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEVSTEEAFDRITA  235 (277)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHHTCCHHHHHHHHHH
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh-hhhhcccccccchHHHHHHHHh
Confidence                       1124555555322         2   27899999999998763110 00           001111111


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..         ....+++++|+|++++.++.++.. ..|+++++.+|.
T Consensus       236 ~~---------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          236 RV---------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cC---------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            11         123477999999999999976543 457999999874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.69  E-value=2.4e-17  Score=152.03  Aligned_cols=206  Identities=11%  Similarity=0.129  Sum_probs=132.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++.....    ..+......++.++.+|   .+++.+++
T Consensus        12 ~~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   83 (265)
T 1h5q_A           12 FVNKTIIVT----GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT----EKVGKEFGVKTKAYQCDVSNTDIVTKTI   83 (265)
T ss_dssp             CTTEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH----HHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH----HHHHHhcCCeeEEEEeeCCCHHHHHHHH
Confidence            345789999    99999999999999999999999999765432110    00111112356777777   55666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----C-CCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----G-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+||.                    |+.++.++++++...    + .++||++||...+...... 
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  162 (265)
T 1h5q_A           84 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-  162 (265)
T ss_dssp             HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-
Confidence            432     48999999984                    355666777766432    3 3689999998776432110 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                         ..+. .....|...|...+            .|+++++||||.++++..... ...+...+....+.         .
T Consensus       163 ---~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~---------~  228 (265)
T 1h5q_A          163 ---LNGS-LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIPL---------N  228 (265)
T ss_dssp             ---TTEE-CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTT---------S
T ss_pred             ---cccc-ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-chhHHHHHHhcCcc---------c
Confidence               0011 11245555553322            389999999999998753221 12222233322222         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      .+++++|+|++++.++.++.. ..|++|++.+|..
T Consensus       229 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          229 RFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence            367899999999999976543 4579999998853

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.69  E-value=1.3e-16  Score=146.94  Aligned_cols=198  Identities=16%  Similarity=0.180  Sum_probs=133.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++++||||    ||+|+||++++++|+++|++|+++ .|+.+....+..    .+.. ...++.++.+|   .+++.+++
T Consensus         3 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~~~~~v~~~~   73 (258)
T 3oid_A            3 QNKCALVT----GSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAE----EIEK-LGVKVLVVKANVGQPAKIKEMF   73 (258)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHT-TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----cCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHh-cCCcEEEEEcCCCCHHHHHHHH
Confidence            35789999    999999999999999999999987 676543322110    0000 11356777777   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....    
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----  149 (258)
T 3oid_A           74 QQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE----  149 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC----
Confidence            543     57999999983                    455555665555    556667999999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCccee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                              ....|.+.|...+            .|+++..|+||.+.++..... ....+...+....+.         .
T Consensus       150 --------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~  212 (258)
T 3oid_A          150 --------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------G  212 (258)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------S
T ss_pred             --------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------C
Confidence                    1255666654322            278999999999988743211 112233334333333         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      .+.+++|+|++++.++.+... .+|+++++.+|..
T Consensus       213 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          213 RMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             SCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCcccCCccCCEEEECCCcc
Confidence            356899999999999987654 5689999999863

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.69  E-value=1.5e-16  Score=148.25  Aligned_cols=215  Identities=13%  Similarity=0.084  Sum_probs=134.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCC-CCCCccc----ch--hcCCCeEEEcC---H
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-PPFNRFN----EI--VSAGGKTVWGD---P  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~-~~~~~~~----~l--~~~~~~~~~~D---~  141 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+......... .......    .+  ....+.++.+|   .
T Consensus         8 l~~k~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            8 FEGKTALIT----GGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            446899999    999999999999999999999999997533110000 0000000    11  12356677777   5


Q ss_pred             hhHHHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEeccccccc
Q 015746          142 AEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       142 ~~~~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~  192 (401)
                      +++.++++..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            6666666532     47999999994                    456666666664    445667999999988764


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc----
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV----  256 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~----  256 (401)
                      ...            ....|.+.|...+            .|+++..|+||.++++..........+.........    
T Consensus       164 ~~~------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  231 (281)
T 3s55_A          164 ANF------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVE  231 (281)
T ss_dssp             CCT------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHH
T ss_pred             CCC------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHH
Confidence            331            1245665553322            389999999999999865431100000000000000    


Q ss_pred             -ccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          257 -PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       257 -~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                       .+.........+.+++|+|++++.++.+... ..|+++++.+|..++
T Consensus       232 ~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          232 SVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence             0000111224678999999999999987654 567999999986543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.69  E-value=3e-16  Score=143.35  Aligned_cols=191  Identities=15%  Similarity=0.153  Sum_probs=128.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++   ++.++.+|   .+++.++++
T Consensus         4 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~---~~~~~~~D~~~~~~~~~~~~   69 (245)
T 1uls_A            4 KDKAVLIT----GAAHGIGRATLELFAKEGARLVACDIEEGPLREAA-------EAV---GAHPVVMDVADPASVERGFA   69 (245)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HTT---TCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHc---CCEEEEecCCCHHHHHHHHH
Confidence            45889999    99999999999999999999999999875433211       011   36677777   566666655


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...++..      
T Consensus        70 ~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------  143 (245)
T 1uls_A           70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------  143 (245)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------
Confidence            42     47999999994                    345555555544    34466799999998844322      


Q ss_pred             CCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|...|...         |   .|+++++|+||.+.++.... ....+...+....+.         ..+
T Consensus       144 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~  206 (245)
T 1uls_A          144 -------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPL---------GRA  206 (245)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTT---------CSC
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCC---------CCC
Confidence                   114455544322         1   38999999999998874322 112222333332222         125


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      .+++|+|++++.++.+... ..|+++++.+|..
T Consensus       207 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          207 GKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            6899999999999986543 4579999998854

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=3e-17  Score=154.67  Aligned_cols=204  Identities=18%  Similarity=0.162  Sum_probs=130.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+...-..........++.++.+|   .+++.+++
T Consensus        16 l~~k~vlVT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           16 LQGQVAIVT----GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            456899999    99999999999999999999999999865432211000000000012356777787   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++..    .+.++||++||...++..     
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  166 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP-----  166 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCC-----
Confidence            542     47999999983                    46677788887655    234689999998732211     


Q ss_pred             CCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCC--CCCC-cHHHHHHHHHcCCCcccCCCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSG--NNKD-CEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                              ....|...|..         .+   .|+++++||||+++|+.  .... ....++..+....+         
T Consensus       167 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p---------  229 (303)
T 1yxm_A          167 --------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP---------  229 (303)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST---------
T ss_pred             --------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc---------
Confidence                    11345444422         12   28999999999999983  2111 00111111111111         


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ...+.+++|+|++++.++..... .+|+++++.+|..+
T Consensus       230 ~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          230 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeec
Confidence            12367899999999999976543 45799999998643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.69  E-value=1.5e-17  Score=147.69  Aligned_cols=165  Identities=14%  Similarity=0.111  Sum_probs=117.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC-
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~-  150 (401)
                      |+||||    ||+|+||++++++|+++  +|++++|+.++...+.       .++.  . +++.+|   ++++.++++. 
T Consensus         1 k~vlVt----Gasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~-------~~~~--~-~~~~~D~~~~~~~~~~~~~~   64 (207)
T 2yut_A            1 MRVLIT----GATGGLGGAFARALKGH--DLLLSGRRAGALAELA-------REVG--A-RALPADLADELEAKALLEEA   64 (207)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH-------HHHT--C-EECCCCTTSHHHHHHHHHHH
T ss_pred             CEEEEE----cCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH-------Hhcc--C-cEEEeeCCCHHHHHHHHHhc
Confidence            579999    99999999999999998  9999999765432211       0111  1 455555   6777777762 


Q ss_pred             CcccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          151 VTFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      -++|+|||++|.                    |+.++.++++++++.+.++||++||...|.+..            ...
T Consensus        65 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~  132 (207)
T 2yut_A           65 GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVP------------GFA  132 (207)
T ss_dssp             CSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSST------------TBH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------Ccc
Confidence            137999999983                    467778899988777778999999998875431            113


Q ss_pred             hHHHHH-----HHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          211 HVQVEK-----YISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       211 ~~~~ek-----~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      .|...|     +++.       .|++++++|||.++++...                    +.+.....+++++|+|+++
T Consensus       133 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~--------------------~~~~~~~~~~~~~dva~~~  192 (207)
T 2yut_A          133 AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA--------------------PLGGPPKGALSPEEAARKV  192 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG--------------------GGTSCCTTCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc--------------------ccCCCCCCCCCHHHHHHHH
Confidence            444444     3322       3899999999999887310                    1122336789999999999


Q ss_pred             HHHhcCCCc
Q 015746          279 TLAVENPEA  287 (401)
Q Consensus       279 ~~~~~~~~~  287 (401)
                      +.+++++..
T Consensus       193 ~~~~~~~~~  201 (207)
T 2yut_A          193 LEGLFREPV  201 (207)
T ss_dssp             HHHHC--CC
T ss_pred             HHHHhCCCC
Confidence            999988765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.69  E-value=6.7e-17  Score=149.59  Aligned_cols=194  Identities=13%  Similarity=0.121  Sum_probs=129.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+        .......+.++.+|   .+++.+++
T Consensus        25 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~   92 (266)
T 3grp_A           25 LTGRKALVT----GATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLA   92 (266)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHH
Confidence            456899999    9999999999999999999999999987544321        11112356777777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.+    ++.++..+++.+..+||++||...+....    
T Consensus        93 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----  168 (266)
T 3grp_A           93 EVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP----  168 (266)
T ss_dssp             HHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC----
Confidence            532     47999999994                    3445    44555555566667999999977653321    


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|...         |   .|+++..|+||.+.++.... ........+....++         ..
T Consensus       169 --------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r  230 (266)
T 3grp_A          169 --------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPM---------KR  230 (266)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTT---------CS
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCC---------CC
Confidence                    124566555322         2   38999999999998763211 112233344444443         23


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       231 ~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          231 MGIGEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            45799999999999986644 568999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.69  E-value=8.5e-17  Score=150.87  Aligned_cols=202  Identities=15%  Similarity=0.142  Sum_probs=134.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+.......    .........+.++.+|   .+++.++
T Consensus        44 ~l~gk~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~  115 (291)
T 3ijr_A           44 KLKGKNVLIT----GGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDI  115 (291)
T ss_dssp             TTTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHH
T ss_pred             CCCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3457899999    999999999999999999999999998743211000    0000112356677777   5566665


Q ss_pred             hcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ++..     ++|++||+||.                     |+.++.++++++...  ...+||++||...+....    
T Consensus       116 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----  191 (291)
T 3ijr_A          116 VQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE----  191 (291)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT----
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC----
Confidence            5532     47999999983                     467778888888765  234899999988775432    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|...+            .|+++..|+||.|+++.............         +........
T Consensus       192 --------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~p~~r  254 (291)
T 3ijr_A          192 --------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ---------FGSNVPMQR  254 (291)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH---------TTTTSTTSS
T ss_pred             --------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH---------HHccCCCCC
Confidence                    1245665553322            28999999999998873110000111111         222223345


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      +.+++|+|++++.++.+... ..|+++++.+|..+
T Consensus       255 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          255 PGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             CBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             CcCHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence            67899999999999986644 56799999988643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.69  E-value=2.7e-16  Score=143.69  Aligned_cols=198  Identities=14%  Similarity=0.164  Sum_probs=133.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.. ....+.++.+|   .+++.++++
T Consensus         4 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~   74 (247)
T 3lyl_A            4 NEKVALVT----GASRGIGFEVAHALASKGATVVGTATSQASAEKFEN----SMKE-KGFKARGLVLNISDIESIQNFFA   74 (247)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHH-TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCceEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998755432111    0000 02356677777   556666554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....     
T Consensus        75 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  149 (247)
T 3lyl_A           75 EIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP-----  149 (247)
T ss_dssp             HHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----
Confidence            32     48999999994                    355555666654    334556899999987664321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|.+.|...+            .|+++..++||.+.++.... ........+....+         ...+
T Consensus       150 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~  212 (247)
T 3lyl_A          150 -------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK-LTDEQKSFIATKIP---------SGQI  212 (247)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-SCHHHHHHHHTTST---------TCCC
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-ccHHHHHHHhhcCC---------CCCC
Confidence                   1245666554222            38999999999998875433 12222222322222         2346


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+++|+|++++.++.+... .+|++|++.+|..+
T Consensus       213 ~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          213 GEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             cCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            7899999999999976544 46799999988654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.69  E-value=2.2e-16  Score=145.98  Aligned_cols=186  Identities=16%  Similarity=0.150  Sum_probs=125.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++.                .++.++.+|   .+++.+++
T Consensus         6 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~   65 (264)
T 2dtx_A            6 LRDKVVIVT----GASMGIGRAIAERFVDEGSKVIDLSIHDPGE----------------AKYDHIECDVTNPDQVKASI   65 (264)
T ss_dssp             GTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESSCCCS----------------CSSEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEecCcccC----------------CceEEEEecCCCHHHHHHHH
Confidence            456899999    9999999999999999999999999987541                245666676   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+....    
T Consensus        66 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  141 (264)
T 2dtx_A           66 DHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK----  141 (264)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC----
Confidence            532     47999999994                    345555555544    445667999999988765321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH---------hC--CCeEEEecCeeecCCCCCCcH-------H----HHHHHHHcCCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYISE---------NF--SNWASFRPQYMIGSGNNKDCE-------E----WFFDRIVRKRPVP  257 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e---------~g--~~~~ilRp~~v~G~~~~~~~~-------~----~~~~~~~~~~~~~  257 (401)
                              ....|...|...+         .+  +++++|+||.+.++.... ..       .    .....+....   
T Consensus       142 --------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---  209 (264)
T 2dtx_A          142 --------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK-AAELEVGSDPMRIEKKISEWGHEH---  209 (264)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH-HHHHHHCSCHHHHHHHHHHHHHHS---
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh-hhhcccccCchhhHHHHHHHHhcC---
Confidence                    1245555553322         23  889999999997652100 00       0    0111111111   


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                            ....+++++|+|++++.++.++.. ..|+++++.++.
T Consensus       210 ------p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          210 ------PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             ------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence                  113467999999999999986543 457999999875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.69  E-value=2.2e-16  Score=146.77  Aligned_cols=198  Identities=15%  Similarity=0.150  Sum_probs=130.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchhcCCCeEEEcC---H----hh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P----AE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~----~~  143 (401)
                      +.+|+||||    ||+|+||++++++|+++|++|++++| +.++...+..    .+.......+.++.+|   .    ++
T Consensus         9 ~~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~   80 (276)
T 1mxh_A            9 SECPAAVIT----GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVA----ELNAARAGSAVLCKGDLSLSSSLLDC   80 (276)
T ss_dssp             --CCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHHHSTTCEEEEECCCSSSTTHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHH----HHHHhcCCceEEEeccCCCccccHHH
Confidence            346789999    99999999999999999999999999 6543321110    0000002356677777   5    66


Q ss_pred             HHHhhcCC-----cccEEEeCCCC-------------------------------ChhhHHHHHHHHHhC---CC-----
Q 015746          144 VGNVVGGV-----TFDVVLDNNGK-------------------------------NLDAVRPVADWAKSS---GV-----  179 (401)
Q Consensus       144 ~~~~~~~~-----~~d~Vv~~a~~-------------------------------~~~~~~~ll~aa~~~---gv-----  179 (401)
                      +.++++..     ++|+|||+||.                               |+.++.++++++...   +.     
T Consensus        81 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  160 (276)
T 1mxh_A           81 CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSR  160 (276)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCC
Confidence            77666532     47999999984                               233455677776663   33     


Q ss_pred             -CEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHH
Q 015746          180 -KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWF  246 (401)
Q Consensus       180 -~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~  246 (401)
                       .+||++||...+....            ....|...|...         +   .|+++++|+||.++++ ..  ....+
T Consensus       161 ~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~~~~~  225 (276)
T 1mxh_A          161 NLSVVNLCDAMTDLPLP------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA--MPQET  225 (276)
T ss_dssp             CEEEEEECCGGGGSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS--SCHHH
T ss_pred             CcEEEEECchhhcCCCC------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc--CCHHH
Confidence             6899999988775321            124555555332         2   2899999999999998 22  22333


Q ss_pred             HHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ...+....+.   +     +.+.+++|+|++++.++.+... ..|+++++.+|..
T Consensus       226 ~~~~~~~~p~---~-----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          226 QEEYRRKVPL---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             HHHHHTTCTT---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhcCCC---C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence            3444333222   1     2267899999999999976543 4579999998753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.68  E-value=6.6e-17  Score=148.37  Aligned_cols=195  Identities=16%  Similarity=0.205  Sum_probs=129.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecC-CCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+ .++...+.       .++.  ..++.++.+|   ++++.
T Consensus         5 l~~k~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~   73 (258)
T 3afn_B            5 LKGKRVLIT----GSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-------ASMRADGGDAAFFAADLATSEACQ   73 (258)
T ss_dssp             GTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-------HHHHHTTCEEEEEECCTTSHHHHH
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-------HHHHhcCCceEEEECCCCCHHHHH
Confidence            346899999    999999999999999999999999998 54332210       1111  1246677777   66666


Q ss_pred             HhhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCC--C---CEEEEeccccc
Q 015746          146 NVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG--V---KQFLFISSAGI  190 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~g--v---~~~v~~SS~~v  190 (401)
                      ++++..     ++|+|||+||.                     |+.++.++++++    ++.+  .   .+||++||...
T Consensus        74 ~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  153 (258)
T 3afn_B           74 QLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG  153 (258)
T ss_dssp             HHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh
Confidence            666532     47999999984                     234444454433    2222  2   58999999877


Q ss_pred             cc-CCCCCCCCCCCCCCCCCChHHHHHHH-----HH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcc
Q 015746          191 YK-PADEPPHVEGDVVKPDAGHVQVEKYI-----SE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       191 y~-~~~~~~~~E~~~~~~~~~~~~~ek~~-----~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  257 (401)
                      +. ..            +....|...|..     +.       .|++++++|||.++++.... ....+...+..+.+. 
T Consensus       154 ~~~~~------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~-  219 (258)
T 3afn_B          154 HTGGG------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-KTQDVRDRISNGIPM-  219 (258)
T ss_dssp             HHCCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-CCHHHHHHHHTTCTT-
T ss_pred             ccCCC------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc-cCHHHHHHHhccCCC-
Confidence            65 21            112445544432     22       28999999999999985432 123334444443332 


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCC--cCCCcEEEecCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDR  299 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~g~~~~~~~~~  299 (401)
                              ..+++++|+|++++.++.++.  ...|++|++.++.
T Consensus       220 --------~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          220 --------GRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             --------CSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             --------CcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence                    356799999999999997643  2347999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.68  E-value=2.7e-16  Score=145.52  Aligned_cols=201  Identities=15%  Similarity=0.171  Sum_probs=130.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+... ...++.++.+|   .+++.++
T Consensus        11 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~   82 (267)
T 1iy8_A           11 FTDRVVLIT----GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA----AVLETAPDAEVLTTVADVSDEAQVEAY   82 (267)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhcCCceEEEEEccCCCHHHHHHH
Confidence            446899999    999999999999999999999999998754332110    00000 02356677777   5666666


Q ss_pred             hcCC-----cccEEEeCCCCC---------------------hh----hHHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGKN---------------------LD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~~---------------------~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|+|||+||..                     +.    .++.++..+++.+.++||++||...+...   
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  159 (267)
T 1iy8_A           83 VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---  159 (267)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC---
Confidence            6532     479999999841                     22    23455666666677799999998765432   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCC-------CCcHHHHHHHHHcCCCccc
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN-------KDCEEWFFDRIVRKRPVPI  258 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~-------~~~~~~~~~~~~~~~~~~~  258 (401)
                               +....|.+.|...+            .|+++++|+||.++++...       ........+.+....+   
T Consensus       160 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---  227 (267)
T 1iy8_A          160 ---------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP---  227 (267)
T ss_dssp             ---------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT---
T ss_pred             ---------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC---
Confidence                     11244555553222            3899999999999876210       0001111112222111   


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       259 ~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                            ...+.+++|+|++++.++.++.. ..|+++++.+|..+
T Consensus       228 ------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          228 ------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             ------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             ------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence                  12367899999999999876543 45799999988654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.68  E-value=2.2e-16  Score=144.56  Aligned_cols=193  Identities=13%  Similarity=0.166  Sum_probs=132.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+....+.        +........+.+|   .+++.++++
T Consensus         8 ~gk~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~   75 (248)
T 3op4_A            8 EGKVALVT----GASRGIGKAIAELLAERGAKVIGTATSESGAQAIS--------DYLGDNGKGMALNVTNPESIEAVLK   75 (248)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceEEEEeCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999875443211        1111234566666   666666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+....     
T Consensus        76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  150 (248)
T 3op4_A           76 AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA-----  150 (248)
T ss_dssp             HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC-----
Confidence            32     47999999994                    455666666655    335667999999977654321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|.+.|...+            .|++++.|+||.+..+..... ............+.         ..+
T Consensus       151 -------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~p~---------~r~  213 (248)
T 3op4_A          151 -------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-NDEQRTATLAQVPA---------GRL  213 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHHHHHHHHTCTT---------CSC
T ss_pred             -------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHHHHHHHhcCCC---------CCC
Confidence                   1255666664222            389999999999988754321 12222333333332         235


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+++|+|++++.++.+... ..|+++++.+|.
T Consensus       214 ~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          214 GDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            6899999999999876543 567999999875

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.68  E-value=2.1e-16  Score=147.60  Aligned_cols=195  Identities=17%  Similarity=0.207  Sum_probs=127.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.+
T Consensus        42 l~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~d~~~v~~  110 (285)
T 2c07_A           42 GENKVALVT----GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-------DEIKSFGYESSGYAGDVSKKEEISE  110 (285)
T ss_dssp             CSSCEEEEE----STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-------HHHHhcCCceeEEECCCCCHHHHHH
Confidence            346899999    99999999999999999999999888764432211       1111  1246677777   566666


Q ss_pred             hhcC-----CcccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~-----~~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++.     .++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+....  
T Consensus       111 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--  188 (285)
T 2c07_A          111 VINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV--  188 (285)
T ss_dssp             HHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC--
Confidence            6542     147999999984                    34454444444    4455777999999987654321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|...|...         +   .|+++++||||.++++.... ....+...+....+.         
T Consensus       189 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------  248 (285)
T 2c07_A          189 ----------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---------  248 (285)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCC---------
Confidence                      124455555322         2   28999999999998874322 112223333332221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+++++|+|++++.++.++.. ..|+++++.+|.
T Consensus       249 ~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          249 GRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            2367999999999999976543 457999999875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.68  E-value=2.6e-16  Score=145.18  Aligned_cols=201  Identities=13%  Similarity=0.120  Sum_probs=132.6

Q ss_pred             cccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~  144 (401)
                      .++|+||||    ||+  |+||++++++|+++|++|++++|+.+...        ...++..  .++.++.+|   ++++
T Consensus         6 l~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~l~~~~~~~~~~~~D~~~~~~v   73 (261)
T 2wyu_A            6 LSGKKALVM----GVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP--------EAEKLAEALGGALLFRADVTQDEEL   73 (261)
T ss_dssp             CTTCEEEEE----SCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHH--------HHHHHHHHTTCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH--------HHHHHHHhcCCcEEEECCCCCHHHH
Confidence            346889999    999  99999999999999999999999763111        1111111  236777777   5666


Q ss_pred             HHhhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhCC--CCEEEEecccccccC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKP  193 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~  193 (401)
                      .++++..     ++|+|||+||.                        |+.++.++++++...-  -.+||++||...+..
T Consensus        74 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  153 (261)
T 2wyu_A           74 DALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV  153 (261)
T ss_dssp             HHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC
Confidence            6666532     47999999984                        3456677888876651  248999999776543


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~  260 (401)
                      ..            ....|...|...         +   .|+++++|+||.++++..... ....+...+....++.   
T Consensus       154 ~~------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~---  218 (261)
T 2wyu_A          154 VP------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---  218 (261)
T ss_dssp             CT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTS---
T ss_pred             CC------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCC---
Confidence            21            113455554322         2   289999999999999743221 1222333333333322   


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHH
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~e  305 (401)
                            .+.+++|+|++++.++..... ..|++|++.++..++..|
T Consensus       219 ------~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          219 ------RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             ------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             ------CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence                  245899999999999976443 457999999986554333

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.68  E-value=1.9e-16  Score=144.83  Aligned_cols=191  Identities=18%  Similarity=0.248  Sum_probs=123.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.             ++.+...|++++.++++..
T Consensus        13 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------------~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A           13 FVSRSVLVT----GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------------EEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-------------CeeccCCCHHHHHHHHHHH
Confidence            346899999    99999999999999999999999999875443210             1222223466666666532


Q ss_pred             -----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCCC
Q 015746          152 -----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       152 -----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                           ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+...        
T Consensus        76 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  147 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI--------  147 (247)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC--------
Confidence                 47999999984                    344555555544    45667799999998654321        


Q ss_pred             CCCCCCCChHHHHHH-----HH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          203 DVVKPDAGHVQVEKY-----IS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~-----~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                          +....|...|.     .+    |   .|+++++|+||.+.++.... ........+....+         ...+.+
T Consensus       148 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~  213 (247)
T 1uzm_A          148 ----GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFIP---------AKRVGT  213 (247)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGCT---------TCSCBC
T ss_pred             ----CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHHhcCC---------CCCCcC
Confidence                11244555553     22    2   38999999999997652110 00111122211111         123679


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ++|+|++++.++..... ..|+++++.+|..+
T Consensus       214 ~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          214 PAEVAGVVSFLASEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHHcCccccCCcCCEEEECCCccc
Confidence            99999999999976443 45799999988643

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.68  E-value=1e-16  Score=147.66  Aligned_cols=203  Identities=16%  Similarity=0.154  Sum_probs=123.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.        ......+.++.+|   .+++.+++
T Consensus         7 l~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~   74 (261)
T 3n74_A            7 LEGKVALIT----GAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA--------GEIGDAALAVAADISKEADVDAAV   74 (261)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999876543221        1112356777777   55666655


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCC----CCEEEEecccccccCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG----VKQFLFISSAGIYKPA  194 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~g----v~~~v~~SS~~vy~~~  194 (401)
                      +..     ++|+|||+||.                     |+.++.++++++    ++.+    ..+||++||...+...
T Consensus        75 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  154 (261)
T 3n74_A           75 EAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR  154 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC
Confidence            532     47999999984                     344544555544    3321    3479999998766432


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCC
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (401)
                      .            ....|.+.|...+            .++++..++||.+.++.....     .... .......+.+.
T Consensus       155 ~------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~-~~~~~~~~~~~  216 (261)
T 3n74_A          155 P------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF-----MGED-SEEIRKKFRDS  216 (261)
T ss_dssp             T------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------
T ss_pred             C------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh-----cccC-cHHHHHHHhhc
Confidence            1            1245665553322            388999999999988743211     0000 00001111112


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHH
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLD  304 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~  304 (401)
                      .....+++++|+|++++.++..... .+|+++++.+|..++..
T Consensus       217 ~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          217 IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred             CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCCC
Confidence            2234577999999999999975543 56899999999876543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.68  E-value=3.8e-16  Score=144.00  Aligned_cols=196  Identities=13%  Similarity=0.158  Sum_probs=128.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ..++.++.+|   .+++.+++
T Consensus        10 ~~~k~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~   77 (265)
T 2o23_A           10 VKGLVAVIT----GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA-------KKL-GNNCVFAPADVTSEKDVQTAL   77 (265)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999876543211       111 2356777777   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------------ChhhHHHHHHHHHhC----------CCCEEEEecc
Q 015746          149 GGV-----TFDVVLDNNGK--------------------------NLDAVRPVADWAKSS----------GVKQFLFISS  187 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------------~~~~~~~ll~aa~~~----------gv~~~v~~SS  187 (401)
                      +..     ++|+|||+||.                          |+.++.++++++...          +..+||++||
T Consensus        78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS  157 (265)
T 2o23_A           78 ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  157 (265)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             HHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence            522     47999999983                          234555666665543          5678999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCC
Q 015746          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP  255 (401)
Q Consensus       188 ~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  255 (401)
                      ...+....            ....|...|...+            .++++++|+||.+.++.... ....+...+....+
T Consensus       158 ~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~  224 (265)
T 2o23_A          158 VAAFEGQV------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVP  224 (265)
T ss_dssp             THHHHCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS
T ss_pred             hhhcCCCC------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHcCC
Confidence            88775421            1245555553221            38999999999998874321 00111111111111


Q ss_pred             cccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCC
Q 015746          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (401)
Q Consensus       256 ~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~  301 (401)
                      .  .      ..+++++|+|++++.+++.. ...|+++++.+|..+
T Consensus       225 ~--~------~~~~~~~dva~~~~~l~~~~-~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          225 F--P------SRLGDPAEYAHLVQAIIENP-FLNGEVIRLDGAIRM  261 (265)
T ss_dssp             S--S------CSCBCHHHHHHHHHHHHHCT-TCCSCEEEESTTCCC
T ss_pred             C--c------CCCCCHHHHHHHHHHHhhcC-ccCceEEEECCCEec
Confidence            1  0      23578999999999999754 344699999988644

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.68  E-value=2.2e-16  Score=145.36  Aligned_cols=197  Identities=17%  Similarity=0.131  Sum_probs=127.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++| +.+....+       ..++.  ...+.++.+|   .+++.
T Consensus         5 l~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~~~   73 (261)
T 1gee_A            5 LEGKVVVIT----GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV-------LEEIKKVGGEAIAVKGDVTVESDVI   73 (261)
T ss_dssp             GTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCEEEEEECCTTSHHHHH
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHH-------HHHHHhcCCceEEEECCCCCHHHHH
Confidence            346899999    99999999999999999999999999 54322211       01111  1245667777   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CCEEEEecccccccCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPAD  195 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~g-v~~~v~~SS~~vy~~~~  195 (401)
                      ++++..     ++|+|||+||.                    |+.++.+++++    +++.+ .++||++||...+... 
T Consensus        74 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-  152 (261)
T 1gee_A           74 NLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-  152 (261)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC-
Confidence            665532     47999999984                    33444454444    44445 5799999998765322 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~  262 (401)
                                 +....|...|..         .+   .+++++++|||.++++...... ...+...+....+       
T Consensus       153 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------  214 (261)
T 1gee_A          153 -----------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP-------  214 (261)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT-------
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC-------
Confidence                       122456655522         22   2899999999999987432100 0112222222222       


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                        ...+++++|+|++++.++.+... ..|+++++.++..
T Consensus       215 --~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          215 --MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence              12467999999999999976433 4579999998854

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.68  E-value=2.6e-16  Score=146.43  Aligned_cols=199  Identities=14%  Similarity=0.131  Sum_probs=131.0

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++ ...+.++.+|   .+++.++
T Consensus        26 ~l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~d~~~v~~~   93 (277)
T 3gvc_A           26 DLAGKVAIVT----GAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA-------TKI-GCGAAACRVDVSDEQQIIAM   93 (277)
T ss_dssp             -CTTCEEEET----TTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHH-CSSCEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHc-CCcceEEEecCCCHHHHHHH
Confidence            4557899999    99999999999999999999999999875443211       111 2466777777   5666665


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....   
T Consensus        94 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~---  170 (277)
T 3gvc_A           94 VDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG---  170 (277)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC---
Confidence            5532     47999999994                    455555555554    445666899999987654321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCC---C--
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG---S--  261 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~--  261 (401)
                               ....|.+.|...+            .|+++++|+||.++++.         ........+-....   .  
T Consensus       171 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~---------~~~~~~~~~~~~~~~~~~~~  232 (277)
T 3gvc_A          171 ---------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM---------QQTAMAMFDGALGAGGARSM  232 (277)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHHTCC------CCHHHH
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch---------HHHhhhcchhhHHHHhhhhh
Confidence                     1245665553322            48999999999998862         11111100000000   0  


Q ss_pred             -CcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          262 -GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       262 -~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                       ......+.+++|+|++++.++.+... ..|+++++.+|...+
T Consensus       233 ~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          233 IARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             hhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence             00112366899999999999976543 568999999986443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.68  E-value=1.2e-16  Score=145.60  Aligned_cols=195  Identities=18%  Similarity=0.186  Sum_probs=126.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +|+||||    ||+|+||++++++|+++|++|+++ .|+.+....+..    .+.. ....+.++.+|   .+++.++++
T Consensus         1 ~k~vlVT----GasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~   71 (244)
T 1edo_A            1 SPVVVVT----GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSK----QIEA-YGGQAITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             CCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHH-HTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHh-cCCcEEEEeCCCCCHHHHHHHHH
Confidence            3689999    999999999999999999999995 676543321110    0000 11245667777   566666665


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++.++++++..    .+.++||++||...+....     
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  146 (244)
T 1edo_A           72 TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-----  146 (244)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC-----
Confidence            32     47999999984                    35566666666544    4667999999986543221     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|...|...+            .+++++++|||.++++.... ....+...+....+.         ..+
T Consensus       147 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~  209 (244)
T 1edo_A          147 -------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPL---------GRT  209 (244)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCTT---------CSC
T ss_pred             -------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCCC---------CCC
Confidence                   1244555553221            37899999999998863211 111222333322221         236


Q ss_pred             eeHHHHHHHHHHHhcCCC--cCCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPE--AASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~--~~~g~~~~~~~~~  299 (401)
                      ++++|+|++++.++..+.  ...|++|++.+|.
T Consensus       210 ~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          210 GQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             BCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             CCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            799999999999985443  2457999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.68  E-value=1.9e-16  Score=147.57  Aligned_cols=195  Identities=16%  Similarity=0.171  Sum_probs=131.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.++.....       .++.  ...+.++.+|   .+++.++
T Consensus        23 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   91 (279)
T 3sju_A           23 RPQTAFVT----GVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-------DGLRAAGHDVDGSSCDVTSTDEVHAA   91 (279)
T ss_dssp             --CEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            35789999    99999999999999999999999999875443211       1111  2356677777   5566655


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHh------CCCCEEEEecccccccCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS------SGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~------~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++..     ++|+|||+||.                    |+.++.++++++..      .+..+||++||...+.... 
T Consensus        92 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~-  170 (279)
T 3sju_A           92 VAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM-  170 (279)
T ss_dssp             HHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC-
Confidence            5432     47999999994                    56677777776544      4556999999988764321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC----------CcHHHHHHHHHcCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKR  254 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~~~  254 (401)
                                 ....|.+.|...+            .|+++..|+||.+.++....          .....+...+....
T Consensus       171 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (279)
T 3sju_A          171 -----------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI  239 (279)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC
Confidence                       1245666664222            37999999999997752100          01112222333332


Q ss_pred             CcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       255 ~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +.         ..+.+++|+|++++.++.+... .+|+++++.+|.
T Consensus       240 p~---------~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          240 PL---------GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             TT---------SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CC---------CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            22         3456899999999999987654 568999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.68  E-value=1.6e-16  Score=146.50  Aligned_cols=206  Identities=16%  Similarity=0.140  Sum_probs=124.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+. ...+..    .+......++.++.+|   .+++.+++
T Consensus         3 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~   74 (260)
T 1x1t_A            3 KGKVAVVT----GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA----GLAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHH----HHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHH----HHHhccCCcEEEEECCCCCHHHHHHHH
Confidence            45889999    999999999999999999999999998754 321100    0000002356667777   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+....    
T Consensus        75 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  150 (260)
T 1x1t_A           75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----  150 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCC----
Confidence            531     47999999984                    344444555544    445667999999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHH--HcCCCcccC-CCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRI--VRKRPVPIP-GSGMQ  264 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~  264 (401)
                              ....|...|...         |   .|+++++|+||.+.++..... ........  ........+ .....
T Consensus       151 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p  221 (260)
T 1x1t_A          151 --------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQP  221 (260)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCT
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh-hhhhccccCCchHHHHHHHhhccCC
Confidence                    124555555322         2   278999999999988743211 00000000  000000000 00011


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ...+.+++|+|++++.++..... ..|+++++.+|.
T Consensus       222 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            23467999999999999976533 457999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.67  E-value=2.1e-16  Score=144.47  Aligned_cols=194  Identities=16%  Similarity=0.238  Sum_probs=127.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++| +.++...+.       .++.  ..++.++.+|   ++++.+
T Consensus         3 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   71 (246)
T 2uvd_A            3 KGKVALVT----GASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVV-------DEIKKLGSDAIAVRADVANAEDVTN   71 (246)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            46899999    99999999999999999999999998 543322110       1111  1246667777   666666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.+    ++.++..+++.+.++||++||...+....  
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  149 (246)
T 2uvd_A           72 MVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP--  149 (246)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC--
Confidence            66532     47999999994                    3344    44455555566777999999987653321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|...|...            ..|+++++|+||.+.++.... ........+....+.         
T Consensus       150 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p~---------  209 (246)
T 2uvd_A          150 ----------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LDENIKAEMLKLIPA---------  209 (246)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CCTTHHHHHHHTCTT---------
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cCHHHHHHHHhcCCC---------
Confidence                      124455555322            238999999999998764321 111112222222221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+++++|+|++++.++.++.. ..|+++++.+|.
T Consensus       210 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          210 AQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            2367999999999999976543 457999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.67  E-value=2.3e-16  Score=146.16  Aligned_cols=197  Identities=15%  Similarity=0.188  Sum_probs=132.0

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      ...+++||||    ||+|+||++++++|+++|++|++++|... ....+..    .+.. ....+.++.+|   .+++.+
T Consensus        25 ~l~~k~vlVT----Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~D~~d~~~v~~   95 (269)
T 4dmm_A           25 PLTDRIALVT----GASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVA----AIAA-AGGEAFAVKADVSQESEVEA   95 (269)
T ss_dssp             TTTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHH-TTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHH----HHHh-cCCcEEEEECCCCCHHHHHH
Confidence            3456899999    99999999999999999999999988542 2211100    0000 11356677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....  
T Consensus        96 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  173 (269)
T 4dmm_A           96 LFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP--  173 (269)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC--
Confidence            65532     47999999994                    455566666654    445666999999987654321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|.+.|...+            .|+++++|+||.+.++.....    ....+....+.         
T Consensus       174 ----------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~p~---------  230 (269)
T 4dmm_A          174 ----------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----AAEKLLEVIPL---------  230 (269)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----HHHHHGGGCTT---------
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----cHHHHHhcCCC---------
Confidence                      1245666664222            389999999999988754321    11223333332         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC--cCCCcEEEecCCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDRAV  301 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~--~~~g~~~~~~~~~~~  301 (401)
                      ..+.+++|+|++++.++.++.  ..+|+++++.+|..+
T Consensus       231 ~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          231 GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            235689999999999998743  256799999998654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.67  E-value=3.6e-16  Score=143.16  Aligned_cols=196  Identities=15%  Similarity=0.166  Sum_probs=123.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+. ++...       .+... ..++.++.+|   ++++.++
T Consensus         5 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~-~~~~~~~~~Dv~~~~~v~~~   72 (249)
T 2ew8_A            5 LKDKLAVIT----GGANGIGRAIAERFAVEGADIAIADLVPAPEAEA-------AIRNL-GRRVLTVKCDVSQPGDVEAF   72 (249)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH-------HHHHT-TCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH-------HHHhc-CCcEEEEEeecCCHHHHHHH
Confidence            346889999    9999999999999999999999999987 33221       01111 1346677777   5666665


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+||.                    |+.++.++++    .+++.+.++||++||...+....   
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  149 (249)
T 2ew8_A           73 GKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE---  149 (249)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC---
Confidence            5421     47999999984                    3444444444    46666777999999988775421   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|...|...+            .|+++++|+||.+.++......... ......  .+.     ....
T Consensus       150 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~--~~~-----~~~~  212 (249)
T 2ew8_A          150 ---------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-MFDVLP--NML-----QAIP  212 (249)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT-----SSSC
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-hhhHHH--Hhh-----CccC
Confidence                     1245555553222            3899999999999887432010000 000100  000     1123


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~  299 (401)
                      .+.+++|+|++++.++.+.. ...|+++++.+|.
T Consensus       213 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          213 RLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             CCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            46799999999999997643 3457999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.67  E-value=1.7e-16  Score=146.62  Aligned_cols=196  Identities=14%  Similarity=0.165  Sum_probs=131.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ..++.++.+|   .+++.+
T Consensus         9 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   77 (264)
T 3ucx_A            9 LTDKVVVIS----GVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-------KQVTDTGRRALSVGTDITDDAQVAH   77 (264)
T ss_dssp             TTTCEEEEE----SCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCcEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            356899999    99999999999999999999999999875443211       1111  2356677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|++||+||.                     |+.++.++++++    ++.+ .+||++||...+.... 
T Consensus        78 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-  155 (264)
T 3ucx_A           78 LVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQA-  155 (264)
T ss_dssp             HHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCT-
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCC-
Confidence            65432     47999999973                     355555666554    3334 5899999988764321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC----------cHHHHHHHHHcCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKR  254 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~  254 (401)
                                 ....|.+.|...+            .|+++..|+||.++++.....          ....+...+..+.
T Consensus       156 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (264)
T 3ucx_A          156 -----------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS  224 (264)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC
Confidence                       1245665553322            389999999999988632110          0111222222332


Q ss_pred             CcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       255 ~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      +         ...+.+++|+|++++.++.+... ..|+++++.+|..
T Consensus       225 p---------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          225 D---------LKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             S---------SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             C---------cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            2         23466899999999999876543 5689999999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.67  E-value=5.8e-16  Score=142.15  Aligned_cols=188  Identities=17%  Similarity=0.221  Sum_probs=123.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++..                .+.++.+|   ++++.+++
T Consensus        19 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~Dl~d~~~v~~~~   78 (253)
T 2nm0_A           19 HMSRSVLVT----GGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------------GFLAVKCDITDTEQVEQAY   78 (253)
T ss_dssp             -CCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------TSEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------------cceEEEecCCCHHHHHHHH
Confidence            446899999    99999999999999999999999999765432                25566666   56666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+...     
T Consensus        79 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  153 (253)
T 2nm0_A           79 KEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----  153 (253)
T ss_dssp             HHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----
Confidence            432     47999999984                    345555555544    34466799999997765321     


Q ss_pred             CCCCCCCCCCChHHHHHH-----HH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKY-----IS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~-----~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                             +....|...|.     .+    |   .|+++++|+||.+.++.... ........+....+.         ..
T Consensus       154 -------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p~---------~~  216 (253)
T 2nm0_A          154 -------AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQVPL---------GR  216 (253)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCTT---------CS
T ss_pred             -------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcCCC---------CC
Confidence                   01134554443     22    2   27899999999987763211 001111122222111         23


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      +++++|+|++++.++.++.. ..|+++++.+|..+
T Consensus       217 ~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          217 YARPEEIAATVRFLASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCcccc
Confidence            67999999999999987543 45799999988643

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.67  E-value=3.3e-17  Score=152.58  Aligned_cols=201  Identities=12%  Similarity=0.109  Sum_probs=133.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++......    .+.......+.++.+|   .+++.+++
T Consensus        25 l~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~   96 (277)
T 4fc7_A           25 LRDKVAFIT----GGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAAR----KLAGATGRRCLPLSMDVRAPPAVMAAV   96 (277)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998754322110    0111122456777777   55666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++.    +.+..+||++||...+....    
T Consensus        97 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  172 (277)
T 4fc7_A           97 DQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA----  172 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT----
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----
Confidence            532     47999999993                    4666777777653    33446899999987664321    


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCC--CcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                              ....|.+.|...         |   .|+++..|+||.++++....  ..............++.        
T Consensus       173 --------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~--------  236 (277)
T 4fc7_A          173 --------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQ--------  236 (277)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTS--------
T ss_pred             --------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCC--------
Confidence                    124555555322         2   38999999999998762100  00112233333444332        


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                       .+.+++|+|++++.++.+... .+|+++++.+|..+
T Consensus       237 -r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          237 -RLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             -CCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCccc
Confidence             345899999999999986543 56899999988643

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.67  E-value=1.5e-16  Score=147.70  Aligned_cols=197  Identities=15%  Similarity=0.159  Sum_probs=120.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++||||    ||+|+||++++++|+++|++|+++ .|+.+....+..    .+.. ....+.++.+|   .+++.++++
T Consensus        26 ~k~vlIT----Gas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~v~~~~~   96 (272)
T 4e3z_A           26 TPVVLVT----GGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVA----AITE-SGGEAVAIPGDVGNAADIAAMFS   96 (272)
T ss_dssp             SCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHH----HHHh-cCCcEEEEEcCCCCHHHHHHHHH
Confidence            5789999    999999999999999999999887 444433221100    0000 11346677777   566666655


Q ss_pred             CC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC-------CCCEEEEecccccccCCCC
Q 015746          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS-------GVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~-------gv~~~v~~SS~~vy~~~~~  196 (401)
                      ..     ++|+|||+||.                     |+.++.++++++...       +..+||++||...+.....
T Consensus        97 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  176 (272)
T 4e3z_A           97 AVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT  176 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC
Confidence            33     47999999984                     355566666655432       3458999999876543210


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                 ....|++.|...+            .|+++++|+||.++++.............+....+.        
T Consensus       177 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--------  237 (272)
T 4e3z_A          177 -----------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPM--------  237 (272)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTT--------
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCc--------
Confidence                       1134555553322            289999999999998753321112222222222222        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       ..+.+++|+|++++.++..... .+|++|++.+|+
T Consensus       238 -~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          238 -QRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -CCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence             2345799999999999976544 557999999874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.67  E-value=3.4e-16  Score=143.75  Aligned_cols=194  Identities=13%  Similarity=0.138  Sum_probs=123.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC--
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~--  151 (401)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.++...+..     +... ...+..+  |.+++.++++..  
T Consensus         1 Mk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----l~~~-~~~~~~~--d~~~v~~~~~~~~~   68 (254)
T 1zmt_A            1 MSTAIVT----NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-----FAET-YPQLKPM--SEQEPAELIEAVTS   68 (254)
T ss_dssp             -CEEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-----HHHH-CTTSEEC--CCCSHHHHHHHHHH
T ss_pred             CeEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCcEEEE--CHHHHHHHHHHHHH
Confidence            4689999    999999999999999999999999998765432110     0000 1122222  655555444321  


Q ss_pred             ---cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCCCC
Q 015746          152 ---TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       152 ---~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                         ++|+|||+||.                     |+.++.++++++    ++.+..+||++||...+....        
T Consensus        69 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  140 (254)
T 1zmt_A           69 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK--------  140 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT--------
T ss_pred             HhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC--------
Confidence               47999999984                     233444555544    455667999999987764321        


Q ss_pred             CCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHH-------HHHHHcCCCcccCCCCcc
Q 015746          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWF-------FDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~  264 (401)
                          ....|...|...+            .|+++++|+||.++|+.........+       ...+....+.        
T Consensus       141 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~--------  208 (254)
T 1zmt_A          141 ----ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL--------  208 (254)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS--------
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC--------
Confidence                1245655553322            38999999999998875433211111       1111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                       ..+.+++|+|++++.++.+... ..|+++++.++..
T Consensus       209 -~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          209 -QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             -SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             -CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence             1256899999999999987653 4579999998753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.67  E-value=3.1e-16  Score=146.15  Aligned_cols=208  Identities=14%  Similarity=0.128  Sum_probs=131.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC--CCccc----chh--cCCCeEEEcC---
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--FNRFN----EIV--SAGGKTVWGD---  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~----~l~--~~~~~~~~~D---  140 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|..+.........  .....    .+.  ...+.++.+|   
T Consensus        13 l~gk~~lVT----Gas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           13 LQGRVAFIT----GAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            456899999    99999999999999999999999998643221111000  00011    111  2355667777   


Q ss_pred             HhhHHHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CCEEEEeccccc
Q 015746          141 PAEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGI  190 (401)
Q Consensus       141 ~~~~~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~g-v~~~v~~SS~~v  190 (401)
                      .+++.++++..     ++|++||+||.                    |+.++.++++++    ++.+ ..+||++||...
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            56666665532     47999999994                    455666666655    3433 458999999887


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc--
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV--  256 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~--  256 (401)
                      +....            ....|.+.|...+            .|++++.|+||.++++......   +..........  
T Consensus       169 ~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~  233 (280)
T 3pgx_A          169 LKATP------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEA---MMEIFARHPSFVH  233 (280)
T ss_dssp             TSCCT------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHH---HHHHHHHCGGGGG
T ss_pred             ccCCC------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhh---hhhhhhcCchhhh
Confidence            64321            1245665553322            4899999999999998643211   11111111100  


Q ss_pred             cc-CCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          257 PI-PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       257 ~~-~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+ ....... .+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       234 ~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          234 SFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             GSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            00 1111122 388999999999999876553 557999999874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.66  E-value=4.2e-16  Score=144.27  Aligned_cols=198  Identities=17%  Similarity=0.167  Sum_probs=128.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.......+.++.+|   .+++.+++
T Consensus        19 l~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~v~~~~   90 (267)
T 1vl8_A           19 LRGRVALVT----GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ----KLTEKYGVETMAFRCDVSNYEEVKKLL   90 (267)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            446899999    999999999999999999999999998654322100    0000012345667777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccc-cccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAG-IYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~-vy~~~~~~~  198 (401)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||.. .+...    
T Consensus        91 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----  166 (267)
T 1vl8_A           91 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM----  166 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC----
Confidence            532     47999999994                    345555555544    556677999999987 32111    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcH--HHHHHHHHcCCCcccCCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCE--EWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  264 (401)
                              +....|...|...+            .|+++++|+||.+.++.... ..  ......+....+.        
T Consensus       167 --------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p~--------  229 (267)
T 1vl8_A          167 --------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA-VFSDPEKLDYMLKRIPL--------  229 (267)
T ss_dssp             --------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH-HHTCHHHHHHHHHTCTT--------
T ss_pred             --------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc-cccChHHHHHHHhhCCC--------
Confidence                    11244555543322            38999999999998764211 00  1122222222221        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       ..+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       230 -~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          230 -GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             -SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence             2356899999999999976543 457999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.66  E-value=1.2e-16  Score=150.31  Aligned_cols=210  Identities=14%  Similarity=0.106  Sum_probs=135.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--C---CCeEEEcC---HhhH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--A---GGKTVWGD---PAEV  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~---~~~~~~~D---~~~~  144 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++..  .   ++.++.+|   .+++
T Consensus        25 ~~k~vlVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           25 SGKSVIIT----GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-------QQILKAGVPAEKINAVVADVTEASGQ   93 (297)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCCCceEEEEecCCCCHHHH
Confidence            45889999    99999999999999999999999999875433211       11111  1   45677777   5666


Q ss_pred             HHhhcCC-----cccEEEeCCCC----------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK----------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~  193 (401)
                      .++++..     ++|+|||+||.                      |+.++.+++++    +++.+ ++||++||...+..
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~  172 (297)
T 1xhl_A           94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC
Confidence            6665532     47999999984                      22333444444    44455 79999999887643


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCC--cH------HHHHHHHHcC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKD--CE------EWFFDRIVRK  253 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~--~~------~~~~~~~~~~  253 (401)
                      ..           +....|...|...            ..|+++++|+||.+.++.....  ..      ..+...+...
T Consensus       173 ~~-----------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
T 1xhl_A          173 AH-----------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC  241 (297)
T ss_dssp             CC-----------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred             CC-----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc
Confidence            20           1124555555332            2489999999999988631110  00      0011111111


Q ss_pred             CCcccCCCCcceeeeeeHHHHHHHHHHHhcCC-C-cCCCcEEEecCCCCCCHHHHHHHHHHHh
Q 015746          254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (401)
Q Consensus       254 ~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~-~-~~~g~~~~~~~~~~~t~~el~~~i~~~~  314 (401)
                      .         ....+.+++|+|++++.++..+ . ...|+++++.+|..+.+.+.+..+.+.+
T Consensus       242 ~---------p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~  295 (297)
T 1xhl_A          242 I---------PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVL  295 (297)
T ss_dssp             C---------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHHT
T ss_pred             C---------CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhhh
Confidence            1         1124678999999999999764 2 3457999999998777666655555443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.66  E-value=4.3e-16  Score=143.38  Aligned_cols=195  Identities=14%  Similarity=0.161  Sum_probs=127.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC--cccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+.  ...+.       .++.  ..++.++.+|   .+++.+
T Consensus         2 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   70 (258)
T 3a28_C            2 SKVAMVT----GGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-------KLIEAADQKAVFVGLDVTDKANFDS   70 (258)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHH
Confidence            5789999    999999999999999999999999998754  22110       1111  1356677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCC-CEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGV-KQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv-~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++.    +.+. ++||++||...+...  
T Consensus        71 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  148 (258)
T 3a28_C           71 AIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF--  148 (258)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC--
Confidence            65522     47999999994                    3445555555544    3466 799999998776432  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcH-----------HHHHHHHHcC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRK  253 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~-----------~~~~~~~~~~  253 (401)
                                +....|...|...+            .|+++++|+||.+.++.... ..           ..+...+...
T Consensus       149 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  217 (258)
T 3a28_C          149 ----------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ-IDAELSKINGKPIGENFKEYSSS  217 (258)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH-HHHHHHHHHCCCTTHHHHHHHTT
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh-hhhhhccccCCchHHHHHHHHhc
Confidence                      11245555553322            38999999999997652100 00           0011111111


Q ss_pred             CCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       254 ~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+         ...+.+++|+|++++.++.+... ..|+++++.+|..+
T Consensus       218 ~p---------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          218 IA---------LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             CT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             CC---------CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            11         12367899999999999976543 45799999988643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.66  E-value=9.3e-17  Score=148.94  Aligned_cols=199  Identities=14%  Similarity=0.137  Sum_probs=132.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+....+..    .+.. ....+.++.+|   .+++.+++
T Consensus        26 l~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~d~~~v~~~~   96 (270)
T 3ftp_A           26 LDKQVAIVT----GASRGIGRAIALELARRGAMVIGTATTEAGAEGIGA----AFKQ-AGLEGRGAVLNVNDATAVDALV   96 (270)
T ss_dssp             TTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHH-HTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCcEEEEEEeCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998754432110    0111 12356677777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++++++.    +.+..+||++||...+....    
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  172 (270)
T 3ftp_A           97 ESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP----  172 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----
Confidence            532     47999999994                    4566666666553    34556899999987664321    


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|...         |   .|+++++|+||.+.++.... ........+....++         ..
T Consensus       173 --------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p~---------~r  234 (270)
T 3ftp_A          173 --------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQIPL---------GR  234 (270)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTCTT---------CS
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcCCC---------CC
Confidence                    124566555422         2   38999999999997752111 011122223333322         34


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      +.+++|+|++++.++..... ..|+++++.+|..+
T Consensus       235 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          235 LGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence            56899999999999875543 56799999998654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=4.4e-17  Score=150.79  Aligned_cols=212  Identities=15%  Similarity=0.158  Sum_probs=130.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++......    .+.. ....++.++.+|   ++++.+++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (267)
T 2gdz_A            6 NGKVALVT----GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKA----ALHEQFEPQKTLFIQCDVADQQQLRDTF   77 (267)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence            35789999    999999999999999999999999998654321100    0000 001246677777   56666666


Q ss_pred             cCC-----cccEEEeCCCC------------Chh----hHHHHHHHHHhCC---CCEEEEecccccccCCCCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK------------NLD----AVRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~------------~~~----~~~~ll~aa~~~g---v~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      +..     ++|+|||+||.            |+.    .++.+++.+++.+   .++||++||...+......       
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  150 (267)
T 2gdz_A           78 RKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ-------  150 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC-------
T ss_pred             HHHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCC-------
Confidence            542     47999999994            222    4566777776653   5699999998877542110       


Q ss_pred             CCCCCChHHHHHHHH---------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCccc---CCCCcceeeeeeHH
Q 015746          205 VKPDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI---PGSGMQFTNIAHVR  272 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~---------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~  272 (401)
                      ..+..+|.+.+.+.+         ..|+++++|+||.+.++.... ....   ... +.....   .........+++++
T Consensus       151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 2gdz_A          151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE---ENM-GQYIEYKDHIKDMIKYYGILDPP  225 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH---HHH-GGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc---ccc-chhhhHHHHHHHHhccccCCCHH
Confidence            001123333333322         238899999999997752110 0000   000 000000   00001123467999


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~e  305 (401)
                      |+|++++.++++.. ..|+++++.+++.+++.|
T Consensus       226 dvA~~v~~l~s~~~-~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          226 LIANGLITLIEDDA-LNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHHHHHHHHCTT-CSSCEEEEETTTEEEECC
T ss_pred             HHHHHHHHHhcCcC-CCCcEEEecCCCcccccC
Confidence            99999999998764 457999999987655443

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.66  E-value=7e-16  Score=144.82  Aligned_cols=202  Identities=15%  Similarity=0.133  Sum_probs=132.6

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC--cccCCCCCCCcccchhcCCCeEEEcC---HhhHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~  145 (401)
                      ..++|+||||    ||+|+||++++++|+++|++|++++|+.+.  ...+..    .. ......+.++.+|   .+++.
T Consensus        46 ~l~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~Dv~d~~~v~  116 (294)
T 3r3s_A           46 RLKDRKALVT----GGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKA----LI-EECGRKAVLLPGDLSDESFAR  116 (294)
T ss_dssp             TTTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHH----HH-HHTTCCEEECCCCTTSHHHHH
T ss_pred             CCCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHH----HH-HHcCCcEEEEEecCCCHHHHH
Confidence            3457899999    999999999999999999999999887421  111000    00 0011345566666   55565


Q ss_pred             HhhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhCCC--CEEEEecccccccCCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEP  197 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~gv--~~~v~~SS~~vy~~~~~~  197 (401)
                      ++++..     ++|++||+||.                     |+.++.++++++...-.  .+||++||...+....  
T Consensus       117 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~--  194 (294)
T 3r3s_A          117 SLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP--  194 (294)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC--
Confidence            555432     47999999994                     46777888888876533  3899999998876432  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|.+.|...+            .|++++.|+||.|+++.....        .........+......
T Consensus       195 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~p~  256 (294)
T 3r3s_A          195 ----------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG--------GQTQDKIPQFGQQTPM  256 (294)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT--------TSCGGGSTTTTTTSTT
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc--------CCCHHHHHHHHhcCCC
Confidence                      1245665554322            389999999999988631000        0000001111222233


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ..+.+++|+|++++.++..... ..|+++++.+|..+
T Consensus       257 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          257 KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            4467899999999999876543 56899999998754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.66  E-value=2.2e-15  Score=140.11  Aligned_cols=216  Identities=14%  Similarity=0.114  Sum_probs=137.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC-CCccc----ch--hcCCCeEEEcC---H
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFN----EI--VSAGGKTVWGD---P  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~l--~~~~~~~~~~D---~  141 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+........... .....    .+  ....+.++.+|   .
T Consensus        11 l~gk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   86 (278)
T 3sx2_A           11 LTGKVAFIT----GAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR   86 (278)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            456899999    99999999999999999999999998743211000000 00001    01  12467777887   5


Q ss_pred             hhHHHhhcCC-----cccEEEeCCCC----------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCC
Q 015746          142 AEVGNVVGGV-----TFDVVLDNNGK----------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPAD  195 (401)
Q Consensus       142 ~~~~~~~~~~-----~~d~Vv~~a~~----------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~  195 (401)
                      +++.++++..     ++|++||+||.                |+.++.++++++.    +.+ ..+||++||...+....
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG  166 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc
Confidence            6666666532     47999999994                4566666666543    333 45899999987654321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHH-HHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~  262 (401)
                      ..        .+....|.+.|...+            .|++++.|+||.|+++..........+.. ..........++.
T Consensus       167 ~~--------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (278)
T 3sx2_A          167 SA--------DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA  238 (278)
T ss_dssp             CS--------SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCS
T ss_pred             cC--------CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhh
Confidence            10        011244666553322            37999999999999986543222222222 2222222233433


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      .. ..+++++|+|++++.++.+... ..|+++++.+|..
T Consensus       239 ~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          239 MP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             SS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             cC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            34 5688999999999999976543 5679999998853

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.66  E-value=3.9e-16  Score=143.47  Aligned_cols=194  Identities=16%  Similarity=0.153  Sum_probs=124.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~~  148 (401)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.+++
T Consensus         2 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~~~~   70 (256)
T 1geg_A            2 KKVALVT----GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-------SEINQAGGHAVAVKVDVSDRDQVFAAV   70 (256)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            4789999    99999999999999999999999999875432211       1111  1246677777   56666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHH----HHHHhCC-CCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSG-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll----~aa~~~g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+||.                    |+.++.+++    ..+++.+ ..+||++||...+....   
T Consensus        71 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  147 (256)
T 1geg_A           71 EQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP---  147 (256)
T ss_dssp             HHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC---
Confidence            521     47999999984                    233444444    4444445 56999999987653221   


Q ss_pred             CCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcH-----------HHHHHHHHcCCC
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRKRP  255 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~-----------~~~~~~~~~~~~  255 (401)
                               ....|...|...         |   .|+++++|+||.+.++.... ..           ......+.... 
T Consensus       148 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-  216 (256)
T 1geg_A          148 ---------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE-IDRQVSEAAGKPLGYGTAEFAKRI-  216 (256)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH-HHHHHHHHHTCCTTHHHHHHHTTC-
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh-hhhhccccccCChHHHHHHHHhcC-
Confidence                     124455555322         1   38999999999998762110 00           00011111111 


Q ss_pred             cccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       256 ~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                              ....+.+++|+|++++.++.++.. ..|+++++.+|..
T Consensus       217 --------p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          217 --------TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             --------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             --------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence                    112367999999999999976543 4579999998854

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.66  E-value=5.7e-16  Score=143.12  Aligned_cols=196  Identities=13%  Similarity=0.128  Sum_probs=129.2

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~  145 (401)
                      .+++||||    ||+  |+||++++++|+++|++|++++|+. ....       ...++..  ....++.+|   .+++.
T Consensus         8 ~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~-------~~~~l~~~~~~~~~~~~D~~~~~~v~   75 (265)
T 1qsg_A            8 SGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQND-KLKG-------RVEEFAAQLGSDIVLQCDVAEDASID   75 (265)
T ss_dssp             TTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHH-------HHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHH-------HHHHHHHhcCCcEEEEccCCCHHHHH
Confidence            35789999    999  9999999999999999999999976 2111       1111111  134667777   55666


Q ss_pred             HhhcCC-----cccEEEeCCCCC-------------------------hhhHHHHHHHHHhCC--CCEEEEecccccccC
Q 015746          146 NVVGGV-----TFDVVLDNNGKN-------------------------LDAVRPVADWAKSSG--VKQFLFISSAGIYKP  193 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~~-------------------------~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~  193 (401)
                      ++++..     ++|+|||+||..                         +.++.++++++...-  -.+||++||...+..
T Consensus        76 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  155 (265)
T 1qsg_A           76 TMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA  155 (265)
T ss_dssp             HHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC
Confidence            655422     589999999842                         335567777776641  248999999877643


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~  260 (401)
                      ..            ....|...|...         +   .|+++++|+||.++++..... ....+...+....++.   
T Consensus       156 ~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~---  220 (265)
T 1qsg_A          156 IP------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR---  220 (265)
T ss_dssp             CT------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS---
T ss_pred             CC------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCC---
Confidence            21            124555555332         2   278999999999999853221 1223333333333321   


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                            .+.+++|+|++++.++.+... ..|++|++.++..+
T Consensus       221 ------~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          221 ------RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             ------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             ------CCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCC
Confidence                  245899999999999876543 45799999988643

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.66  E-value=3.8e-16  Score=143.40  Aligned_cols=200  Identities=17%  Similarity=0.148  Sum_probs=130.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      ...+++||||    ||+|+||++++++|+++|++|+++++ +.+.......    .... ....+.++.+|   .+++.+
T Consensus        10 ~~~~k~vlIT----Gas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~~~~~v~~   80 (256)
T 3ezl_A           10 VMSQRIAYVT----GGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLE----DQKA-LGFDFYASEGNVGDWDSTKQ   80 (256)
T ss_dssp             ---CEEEEET----TTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHH----HHHH-TTCCCEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH----HHHh-cCCeeEEEecCCCCHHHHHH
Confidence            3457899999    99999999999999999999999884 4433221100    0000 12356777777   555666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHH----HHHHHhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPV----ADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~l----l~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.++.++    +..+++.+..+||++||...+....  
T Consensus        81 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  158 (256)
T 3ezl_A           81 AFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF--  158 (256)
T ss_dssp             HHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS--
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC--
Confidence            55532     58999999994                    34554444    4445566767999999987664321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|.+.|...+            .|+++.+++||.+.++.... ....+...+....+.         
T Consensus       159 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------  218 (256)
T 3ezl_A          159 ----------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------  218 (256)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------
T ss_pred             ----------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------
Confidence                      1255666664322            37899999999998763211 122334444443333         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ..+.+++|+|++++.++..... .+|+++++.+|..+
T Consensus       219 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          219 RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            2345799999999999876543 56799999988643

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.66  E-value=5.7e-16  Score=144.09  Aligned_cols=201  Identities=14%  Similarity=0.161  Sum_probs=126.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~  147 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.. .++.++.+|   .+++.++
T Consensus        27 l~~k~vlVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~Dv~d~~~v~~~   95 (276)
T 2b4q_A           27 LAGRIALVT----GGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-------TRLSAYGDCQAIPADLSSEAGARRL   95 (276)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHHTTSSCEEECCCCTTSHHHHHHH
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCceEEEEeeCCCHHHHHHH
Confidence            346899999    99999999999999999999999999875432211       11110 134555566   5666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCC----CEEEEecccccccCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGV----KQFLFISSAGIYKPA  194 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv----~~~v~~SS~~vy~~~  194 (401)
                      ++..     ++|+|||+||.                    |+.++.+++++    +++.+.    ++||++||...+...
T Consensus        96 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~  175 (276)
T 2b4q_A           96 AQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM  175 (276)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC
Confidence            5531     47999999983                    34455444444    444444    799999998876532


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc--CCCcccCCCCcce
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIPGSGMQF  265 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  265 (401)
                      ...      ...+..+|.+.+.+.+.       .|+++++|+||.+.++.... ....+...+..  ..+.         
T Consensus       176 ~~~------~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p~---------  239 (276)
T 2b4q_A          176 GEQ------AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIPM---------  239 (276)
T ss_dssp             CCS------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTSTT---------
T ss_pred             CCC------ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCCC---------
Confidence            110      00111234333333222       38999999999998774211 00001112221  1221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+.+++|+|++++.++.++.. ..|+++++.+|.
T Consensus       240 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          240 GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            2366899999999999976543 457999999875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.65  E-value=6.9e-16  Score=140.35  Aligned_cols=190  Identities=16%  Similarity=0.191  Sum_probs=124.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH--hhHHHhhc--
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AEVGNVVG--  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~--~~~~~~~~--  149 (401)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.++..          .++   ++.++.+|.  +++.++++  
T Consensus         2 ~k~vlVT----Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~---~~~~~~~D~~~~~~~~~~~~~   64 (239)
T 2ekp_A            2 ERKALVT----GGSRGIGRAIAEALVARGYRVAIASRNPEEAA----------QSL---GAVPLPTDLEKDDPKGLVKRA   64 (239)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------HHH---TCEEEECCTTTSCHHHHHHHH
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------Hhh---CcEEEecCCchHHHHHHHHHH
Confidence            4789999    99999999999999999999999999875311          111   356666663  23333332  


Q ss_pred             --CC-cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCCC
Q 015746          150 --GV-TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       150 --~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                        .. ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.....      
T Consensus        65 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  138 (239)
T 2ekp_A           65 LEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP------  138 (239)
T ss_dssp             HHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC------
Confidence              11 47999999984                    234444445544    5567789999999888754310      


Q ss_pred             CCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                          +....|...|...+            .|+++++||||.++++...... ...+...+....+.         ..+.
T Consensus       139 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~  205 (239)
T 2ekp_A          139 ----VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM---------GRWA  205 (239)
T ss_dssp             ----SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT---------SSCB
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC---------CCCc
Confidence                11245555553322            2899999999999887421100 01122223222221         2356


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +++|+|++++.++.+... ..|+++++.+|.
T Consensus       206 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          206 RPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            899999999999876543 457999999874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=7.8e-16  Score=142.70  Aligned_cols=201  Identities=15%  Similarity=0.136  Sum_probs=128.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++  .++.++.+|   .+++.+++
T Consensus         7 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~--~~~~~~~~Dv~d~~~v~~~~   73 (270)
T 1yde_A            7 YAGKVVVVT----GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE-------QEL--PGAVFILCDVTQEDDVKTLV   73 (270)
T ss_dssp             TTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHC--TTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh--cCCeEEEcCCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875433211       011  135667777   56666666


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                     |+.++.++++++...   +.++||++||...+....    
T Consensus        74 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----  149 (270)
T 1yde_A           74 SETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----  149 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC----
Confidence            532     47999999984                     345556666665421   236899999976543211    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCC------CCcHHHHHHHHHcCCCcccCCC
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN------KDCEEWFFDRIVRKRPVPIPGS  261 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~  261 (401)
                              ....|...|...+            .|+++++||||+++++...      .... ..+.......++     
T Consensus       150 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~p~-----  215 (270)
T 1yde_A          150 --------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR-ASIREGMLAQPL-----  215 (270)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHH-HHHHHHHHTSTT-----
T ss_pred             --------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchH-HHHHHHhhcCCC-----
Confidence                    1134555443222            4899999999999986310      0000 001111111221     


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHH
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA  307 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~  307 (401)
                          ..+.+++|+|++++.++.+.....|+++++.+|..+...+..
T Consensus       216 ----~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~  257 (270)
T 1yde_A          216 ----GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCKA  257 (270)
T ss_dssp             ----SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC----
T ss_pred             ----CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCcCc
Confidence                124589999999999887644456899999998766544333

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.65  E-value=2.8e-15  Score=139.97  Aligned_cols=194  Identities=12%  Similarity=0.115  Sum_probs=129.1

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~  145 (401)
                      .+++||||    ||+  |+||++++++|+++|++|++++|+.+ ...       ...++..  .++.++.+|   .+++.
T Consensus        20 ~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~-------~~~~l~~~~~~~~~~~~Dl~~~~~v~   87 (285)
T 2p91_A           20 EGKRALIT----GVANERSIAYGIAKSFHREGAQLAFTYATPK-LEK-------RVREIAKGFGSDLVVKCDVSLDEDIK   87 (285)
T ss_dssp             TTCEEEEC----CCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHH-------HHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHH-------HHHHHHHhcCCeEEEEcCCCCHHHHH
Confidence            45789999    999  99999999999999999999999863 110       1111111  236677777   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhCC---CCEEEEecccccccC
Q 015746          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG---VKQFLFISSAGIYKP  193 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~g---v~~~v~~SS~~vy~~  193 (401)
                      ++++..     ++|+|||+||.                        |+.++.++++++...-   -.+||++||...+..
T Consensus        88 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~  167 (285)
T 2p91_A           88 NLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV  167 (285)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC
Confidence            665532     47999999984                        3456667777776542   258999999776543


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~  260 (401)
                      ..            ....|+..|...         +   .|+++++|+||.++++..... ....+...+....++.   
T Consensus       168 ~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~---  232 (285)
T 2p91_A          168 VP------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFG---  232 (285)
T ss_dssp             CT------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTS---
T ss_pred             CC------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCC---
Confidence            21            124455555332         2   289999999999999854321 1222333333333321   


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                            .+.+++|+|++++.++..... ..|++|++.++.
T Consensus       233 ------~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          233 ------KPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             ------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             ------CCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence                  245899999999999875443 457999999874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.65  E-value=4.9e-16  Score=144.31  Aligned_cols=197  Identities=16%  Similarity=0.187  Sum_probs=130.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|.... ...       ..++.  ...+.++.+|   .+++.+
T Consensus        29 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~-------~~~~~~~~~~~~~~~~Dv~d~~~v~~   96 (273)
T 3uf0_A           29 LAGRTAVVT----GAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEV-------ADEIADGGGSAEAVVADLADLEGAAN   96 (273)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHH-------HHHHHTTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHH-------HHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            456899999    999999999999999999999999975421 110       11111  1245677777   444544


Q ss_pred             hhcC----CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          147 VVGG----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       147 ~~~~----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +.+.    -++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....   
T Consensus        97 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~---  173 (273)
T 3uf0_A           97 VAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR---  173 (273)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---
T ss_pred             HHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC---
Confidence            4321    147999999994                    455666666655    455667999999988764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               ....|.+.|...+            .|+++..|+||.++++..... ........+....+.         
T Consensus       174 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------  235 (273)
T 3uf0_A          174 ---------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------  235 (273)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------
Confidence                     1245665553322            389999999999988742110 011122333333332         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ..+.+++|+|++++.++.+... ..|+++++.+|..+
T Consensus       236 ~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          236 GRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            2355899999999999987543 56899999998643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.65  E-value=8e-16  Score=140.37  Aligned_cols=187  Identities=14%  Similarity=0.132  Sum_probs=127.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|+||||    ||+|+||++++++|++ .|+.|++++|..+...               ..+.++.+|   .+++.+++
T Consensus         3 ~~k~vlIT----Gas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~   63 (244)
T 4e4y_A            3 AMANYLVT----GGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------------ENLKFIKADLTKQQDITNVL   63 (244)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------------TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCeEEEe----CCCChHHHHHHHHHHhcCCcEEEEecccccccc---------------ccceEEecCcCCHHHHHHHH
Confidence            46789999    9999999999999999 7899999988765221               134566666   66666655


Q ss_pred             cC---CcccEEEeCCCC--------------------ChhhHHHHHHHHHhCCC--CEEEEecccccccCCCCCCCCCCC
Q 015746          149 GG---VTFDVVLDNNGK--------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       149 ~~---~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv--~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                      +.   .++|++||+||.                    |+.++.++++++...-.  .++|++||...+....        
T Consensus        64 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------  135 (244)
T 4e4y_A           64 DIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP--------  135 (244)
T ss_dssp             HHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT--------
T ss_pred             HHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC--------
Confidence            42   258999999994                    46677788887766522  3899999988764321        


Q ss_pred             CCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHH-----------HHHHHHcCCCcccCC
Q 015746          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEW-----------FFDRIVRKRPVPIPG  260 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~  260 (401)
                          ....|...|...+            .|+++++|+||.+.++.... ....           .........+     
T Consensus       136 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p-----  205 (244)
T 4e4y_A          136 ----NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN-LIQKYANNVGISFDEAQKQEEKEFP-----  205 (244)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH-HHHHHHHHHTCCHHHHHHHHHTTST-----
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH-HHHhhhhhcCCCHHHHHHHHhhcCC-----
Confidence                1245655553322            38999999999998762110 0000           1111222222     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                          ...+.+++|+|++++.++.+... ..|+++++.+|..
T Consensus       206 ----~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          206 ----LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             ----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ----CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence                23466899999999999986654 5679999998753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.65  E-value=6.9e-16  Score=141.44  Aligned_cols=180  Identities=12%  Similarity=0.112  Sum_probs=125.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~-  151 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.++...              ..+.+...|.+++.++++.. 
T Consensus        21 m~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~d~~d~~~v~~~~~~~~   82 (251)
T 3orf_A           21 MSKNILVL----GGSGALGAEVVKFFKSKSWNTISIDFRENPNAD--------------HSFTIKDSGEEEIKSVIEKIN   82 (251)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS--------------EEEECSCSSHHHHHHHHHHHH
T ss_pred             cCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------------cceEEEeCCHHHHHHHHHHHH
Confidence            46889999    999999999999999999999999998865431              01222245666666665432 


Q ss_pred             ----cccEEEeCCCC---------------------ChhhHHHHHHHHHhCC--CCEEEEecccccccCCCCCCCCCCCC
Q 015746          152 ----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       152 ----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                          ++|+|||+||.                     |+.++.++++++...-  -.+||++||...+....         
T Consensus        83 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------  153 (251)
T 3orf_A           83 SKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS---------  153 (251)
T ss_dssp             TTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT---------
T ss_pred             HHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC---------
Confidence                58999999993                     4667777888776542  13899999988764321         


Q ss_pred             CCCCCChHHHHHHHH---------H-----hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          205 VKPDAGHVQVEKYIS---------E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~---------e-----~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                         ....|.+.|...         +     .++++++|+||.+.++         +........         ....+++
T Consensus       154 ---~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~  212 (251)
T 3orf_A          154 ---GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP---------TNRKYMSDA---------NFDDWTP  212 (251)
T ss_dssp             ---TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH---------HHHHHCTTS---------CGGGSBC
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc---------chhhhcccc---------cccccCC
Confidence               124566555332         2     3688999999998665         222222222         2234678


Q ss_pred             HHHHHHHHHHHhcC-CCc-CCCcEEEecCCCC
Q 015746          271 VRDLSSMLTLAVEN-PEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       271 v~D~a~~~~~~~~~-~~~-~~g~~~~~~~~~~  300 (401)
                      ++|+|++++.++.+ ... .+|+++++.+++.
T Consensus       213 ~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          213 LSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             HHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             HHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence            99999999999988 332 4579999987654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.65  E-value=6.2e-16  Score=144.14  Aligned_cols=200  Identities=16%  Similarity=0.095  Sum_probs=133.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.+
T Consensus         6 l~gk~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   74 (280)
T 3tox_A            6 LEGKIAIVT----GASSGIGRAAALLFAREGAKVVVTARNGNALAELT-------DEIAGGGGEAAALAGDVGDEALHEA   74 (280)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-------HHHTTTTCCEEECCCCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHH
Confidence            346889999    99999999999999999999999999875443211       1111  1245556666   666666


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|++||+||.                     |+.++.++++++    ++.+..++|++||...+.... 
T Consensus        75 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  153 (280)
T 3tox_A           75 LVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF-  153 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC-
Confidence            65532     47999999993                     345555555544    445556999999987762110 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC---cHHHHHHHHHcCCCcccCCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGS  261 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~  261 (401)
                                +....|.+.|...+            .|+++..|+||.+.++.....   ........+....++     
T Consensus       154 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-----  218 (280)
T 3tox_A          154 ----------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL-----  218 (280)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT-----
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc-----
Confidence                      11245666653322            289999999999998753221   112223333333332     


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                          ..+.+++|+|++++.++.+... ..|+++++.+|..++
T Consensus       219 ----~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  256 (280)
T 3tox_A          219 ----KRIARPEEIAEAALYLASDGASFVTGAALLADGGASVT  256 (280)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ----CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence                2356899999999999987643 568999999987554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.65  E-value=1.9e-16  Score=146.35  Aligned_cols=200  Identities=15%  Similarity=0.137  Sum_probs=132.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++...+..       ++. .++.++.+|   .+++.+++
T Consensus         4 l~~k~vlIT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~-~~~~~~~~D~~~~~~v~~~~   71 (263)
T 2a4k_A            4 LSGKTILVT----GAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-------ALE-AEAIAVVADVSDPKAVEAVF   71 (263)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------TCC-SSEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hhc-CceEEEEcCCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998754332111       111 256677777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCC--CCEEEEecccccccCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +..     ++|+|||+||.                    |+.++.++++++...-  ..+||++||...++....     
T Consensus        72 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  146 (263)
T 2a4k_A           72 AEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL-----  146 (263)
T ss_dssp             HHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHH-----
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCCc-----
Confidence            542     47999999983                    4566777777776532  358999999887621100     


Q ss_pred             CCCCCCCCChHHHHHHHH----H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          202 GDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~----e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                         ..+..+|.+.+.+.+    |   .|+++++|+||.++++.... ....+...+....+.         ..+.+++|+
T Consensus       147 ---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dv  213 (263)
T 2a4k_A          147 ---AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEV  213 (263)
T ss_dssp             ---HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHH
Confidence               001124444333322    2   38999999999999874322 112223333333322         135689999


Q ss_pred             HHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          275 SSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       275 a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      |++++.++.+... ..|+++++.++..+
T Consensus       214 A~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          214 AQAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCccc
Confidence            9999999986543 45799999988643

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.65  E-value=5.8e-16  Score=141.16  Aligned_cols=184  Identities=14%  Similarity=0.133  Sum_probs=118.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+|+||++++++|+++|  ++|++++|+.++...+..        +...++.++.+|   .+++.++
T Consensus         2 ~~k~vlIt----GasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~~~~~~~~~   69 (250)
T 1yo6_A            2 SPGSVVVT----GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS--------IKDSRVHVLPLTVTCDKSLDTF   69 (250)
T ss_dssp             CCSEEEES----SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT--------CCCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----cCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh--------ccCCceEEEEeecCCHHHHHHH
Confidence            46789999    999999999999999999  999999998765443211        112356778887   5566666


Q ss_pred             hcCC-------cccEEEeCCCC---------------------ChhhHHHHHHHHHh----C------C-----CCEEEE
Q 015746          148 VGGV-------TFDVVLDNNGK---------------------NLDAVRPVADWAKS----S------G-----VKQFLF  184 (401)
Q Consensus       148 ~~~~-------~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~----~------g-----v~~~v~  184 (401)
                      ++..       ++|+|||+||.                     |+.++.++++++..    .      +     ..+||+
T Consensus        70 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  149 (250)
T 1yo6_A           70 VSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVIT  149 (250)
T ss_dssp             HHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEE
T ss_pred             HHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEE
Confidence            6522       47999999984                     24455555555433    2      4     579999


Q ss_pred             ecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc
Q 015746          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR  252 (401)
Q Consensus       185 ~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  252 (401)
                      +||...+.....    +.. ..+....|...|...+            .|+++++|+||++.++....            
T Consensus       150 isS~~~~~~~~~----~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------  212 (250)
T 1yo6_A          150 ISSGLGSITDNT----SGS-AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------  212 (250)
T ss_dssp             ECCGGGCSTTCC----STT-SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------
T ss_pred             eccCccccCCcc----ccc-ccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------
Confidence            999877643211    011 1112245665553322            28999999999987763210            


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                                   ..+++++|+|+.++.++..... .+|+.+.+.++
T Consensus       213 -------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          213 -------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             -------------------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             -------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence                         1356899999999999988764 45677776654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.65  E-value=2.8e-16  Score=145.46  Aligned_cols=205  Identities=17%  Similarity=0.200  Sum_probs=131.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.......    .+... ....+..+.+|   .+++.+++
T Consensus         9 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (267)
T 3t4x_A            9 KGKTALVT----GSTAGIGKAIATSLVAEGANVLINGRREENVNETIK----EIRAQYPDAILQPVVADLGTEQGCQDVI   80 (267)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHHHCTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhCCCceEEEEecCCCCHHHHHHHH
Confidence            45799999    999999999999999999999999998754432110    00000 01234566666   66677777


Q ss_pred             cCC-cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                      +.. ++|++||+||.                    |+.+    ++.++..+++.+..++|++||...+....        
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  152 (267)
T 3t4x_A           81 EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ--------  152 (267)
T ss_dssp             HHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT--------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC--------
Confidence            654 48999999994                    3444    44445555666667999999988764321        


Q ss_pred             CCCCCCChHHHHHHHHH---------h---CCCeEEEecCeeecCCCCC----------CcHHHHHHHHHcCCCcccCCC
Q 015746          204 VVKPDAGHVQVEKYISE---------N---FSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRPVPIPGS  261 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~e---------~---g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~  261 (401)
                          ....|.+.|...+         .   |+++..|+||.+.++....          ..............     ..
T Consensus       153 ----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  223 (267)
T 3t4x_A          153 ----EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RP  223 (267)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CT
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CC
Confidence                1255666664333         2   6889999999987652100          00011111111100     00


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      ......+.+++|+|++++.++.+... .+|+++++.+|...+
T Consensus       224 ~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          224 TSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             TCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             cccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            11123567899999999999886543 568999999987554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.64  E-value=6.7e-16  Score=142.84  Aligned_cols=207  Identities=14%  Similarity=0.162  Sum_probs=136.1

Q ss_pred             ccccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHH
Q 015746           71 AAEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        71 ~~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~  145 (401)
                      ...+|+||||    ||+  |+||++++++|+++|++|++++|+......+.     .+.. ....+.++.+|   .+++.
T Consensus        11 ~~~~k~vlIT----Ga~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~Dv~~~~~v~   80 (271)
T 3ek2_A           11 FLDGKRILLT----GLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRIT-----EFAA-EFGSELVFPCDVADDAQID   80 (271)
T ss_dssp             TTTTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----HHHH-HTTCCCEEECCTTCHHHHH
T ss_pred             ccCCCEEEEe----CCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHH-----HHHH-HcCCcEEEECCCCCHHHHH
Confidence            4457899999    999  99999999999999999999999853222110     0000 11246778887   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC-------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccC
Q 015746          146 NVVGGV-----TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~  193 (401)
                      ++++..     ++|+|||+||.                         |+.++.++++++...  ...+||++||...+..
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~  160 (271)
T 3ek2_A           81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA  160 (271)
T ss_dssp             HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC
Confidence            666533     58999999984                         244566777777654  1248999999887643


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~  260 (401)
                      ..            ....|++.|...+            .|+++++|+||.|..+..... ....+...+....+..   
T Consensus       161 ~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~---  225 (271)
T 3ek2_A          161 IP------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLK---  225 (271)
T ss_dssp             CT------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTS---
T ss_pred             CC------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcC---
Confidence            21            1256666653332            289999999999988754332 1123334444434332   


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHH
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAK  308 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~  308 (401)
                            .+.+++|+|++++.++.+... .+|+++++.+|..+++.|+++
T Consensus       226 ------~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          226 ------RNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             ------SCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             ------CCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence                  245799999999999986543 567999999998777766554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.64  E-value=2.2e-16  Score=146.01  Aligned_cols=201  Identities=17%  Similarity=0.172  Sum_probs=132.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++......    .+.......+.++.+|   .+++.+++
T Consensus        18 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~~~~~v~~~~   89 (266)
T 4egf_A           18 LDGKRALIT----GATKGIGADIARAFAAAGARLVLSGRDVSELDAARR----ALGEQFGTDVHTVAIDLAEPDAPAELA   89 (266)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998755432110    1111123467778887   55555555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||+||.                    |+.++.++++++.    +.+ ..+||++||...+....   
T Consensus        90 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  166 (266)
T 4egf_A           90 RRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP---  166 (266)
T ss_dssp             HHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC---
Confidence            432     47999999994                    4555555655543    333 35899999988764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               ....|.+.|...+            .|+++..|+||.+.++..... ........+....++         
T Consensus       167 ---------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------  228 (266)
T 4egf_A          167 ---------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------  228 (266)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------
Confidence                     1245666553322            389999999999987621100 001122333333332         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ..+.+++|+|++++.++.+... .+|+++++.+|..+
T Consensus       229 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          229 GRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            2345799999999999986543 56899999988643

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.64  E-value=1.1e-15  Score=138.28  Aligned_cols=178  Identities=19%  Similarity=0.177  Sum_probs=115.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++  .++.++.+|   .+++.++++
T Consensus         4 ~~k~vlVt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~--~~~~~~~~D~~~~~~~~~~~~   70 (234)
T 2ehd_A            4 MKGAVLIT----GASRGIGEATARLLHAKGYRVGLMARDEKRLQALA-------AEL--EGALPLPGDVREEGDWARAVA   70 (234)
T ss_dssp             CCCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHS--TTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh--hhceEEEecCCCHHHHHHHHH
Confidence            35789999    99999999999999999999999999765432211       111  156777777   556666554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+...      
T Consensus        71 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------  144 (234)
T 2ehd_A           71 AMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF------  144 (234)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC------
Confidence            32     47999999984                    23333    466667777788899999998876432      


Q ss_pred             CCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                            +....|...|...         +   .|++++++|||.+.++....         . . ..          +.+
T Consensus       145 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~-~-~~----------~~~  197 (234)
T 2ehd_A          145 ------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN---------T-P-GQ----------AWK  197 (234)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------
T ss_pred             ------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc---------c-c-cc----------cCC
Confidence                  1124566555321         1   38999999999987653211         0 0 00          115


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEec
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLV  296 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~  296 (401)
                      ++++|+|++++.++.++.. ..|++....
T Consensus       198 ~~~~dvA~~~~~l~~~~~~~~~g~~~~~~  226 (234)
T 2ehd_A          198 LKPEDVAQAVLFALEMPGHAMVSEIELRP  226 (234)
T ss_dssp             CCHHHHHHHHHHHHHSCCSSCCCEEECCC
T ss_pred             CCHHHHHHHHHHHhCCCcccccceEEEee
Confidence            6899999999999987654 344555433

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.64  E-value=8.1e-16  Score=142.45  Aligned_cols=199  Identities=12%  Similarity=0.142  Sum_probs=129.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccch--hcCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~  145 (401)
                      ..+++||||    ||+|+||++++++|+++|++|+++++.... ....       ...+  ...++.++.+|   .+++.
T Consensus        23 ~~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~v~   91 (269)
T 3gk3_A           23 QAKRVAFVT----GGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTW-------LMHERDAGRDFKAYAVDVADFESCE   91 (269)
T ss_dssp             -CCCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHH-------HHHHHTTTCCCEEEECCTTCHHHHH
T ss_pred             hcCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH-------HHHHHhcCCceEEEEecCCCHHHHH
Confidence            346789999    999999999999999999999999854422 1110       0011  12357778887   55566


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.... 
T Consensus        92 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  170 (269)
T 3gk3_A           92 RCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF-  170 (269)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC-
Confidence            555432     47999999994                    355555555554    345557999999987664321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                 ....|++.|...+            .|+++..|+||.+..+.....     ..........    ....
T Consensus       171 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~----~~~~  230 (269)
T 3gk3_A          171 -----------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-----PQDVLEAKIL----PQIP  230 (269)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCT
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-----chhHHHHHhh----hcCC
Confidence                       1245666654222            289999999999988753321     1111110111    1112


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      ...+.+++|+|++++.++..... .+|+++++.+|..++
T Consensus       231 ~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          231 VGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             TSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             cCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            23456899999999999987654 568999999987553

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.64  E-value=1.4e-16  Score=147.80  Aligned_cols=198  Identities=15%  Similarity=0.134  Sum_probs=131.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++.....       .++.  ..++.++.+|   .+++.+
T Consensus        24 l~gk~~lVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~   92 (271)
T 4ibo_A           24 LGGRTALVT----GSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-------QEFRNVGHDAEAVAFDVTSESEIIE   92 (271)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-------HHHHHTTCCEEECCCCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEcCCCCHHHHHH
Confidence            456899999    99999999999999999999999999875443211       1111  1245566666   666666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+....  
T Consensus        93 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~--  170 (271)
T 4ibo_A           93 AFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA--  170 (271)
T ss_dssp             HHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT--
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC--
Confidence            65532     47999999994                    455555555444    444667999999977653321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcc
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                ....|.+.|...+            .|+++..|+||.+.++...... ...+...+....+..       
T Consensus       171 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~-------  233 (271)
T 4ibo_A          171 ----------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAK-------  233 (271)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTC-------
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCC-------
Confidence                      1245665553322            3899999999999887321100 012233333333332       


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                        .+.+++|+|++++.++..... ..|+++++.+|...
T Consensus       234 --r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          234 --RWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             --SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             --CCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence              345789999999998876543 56899999998643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.64  E-value=1.1e-15  Score=140.08  Aligned_cols=195  Identities=15%  Similarity=0.144  Sum_probs=126.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.++......    .+.......+.++.+|     .+++.+
T Consensus        10 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (252)
T 3f1l_A           10 LNDRIILVT----GASDGIGREAAMTYARYGATVILLGRNEEKLRQVAS----HINEETGRQPQWFILDLLTCTSENCQQ   81 (252)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSCCCEEEECCTTTCCHHHHHH
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhcCCCceEEEEecccCCHHHHHH
Confidence            456899999    999999999999999999999999998755432110    1111112255666665     455555


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|++||+||.                     |+.++.++++++    ++.+..+||++||...+.... 
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-  160 (252)
T 3f1l_A           82 LAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA-  160 (252)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC-
Confidence            55432     47999999984                     345555666655    666667999999987654321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH---------h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE---------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e---------~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                 ....|.+.|...+         +  .+++..|.||.+..+         +........+         .
T Consensus       161 -----------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~---------~~~~~~~~~~---------~  211 (252)
T 3f1l_A          161 -----------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA---------MRASAFPTED---------P  211 (252)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---------HHHHHCTTCC---------G
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---------hhhhhCCccc---------h
Confidence                       1245666654332         2  378889999987553         1222222111         1


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHH
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLD  304 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~  304 (401)
                      ..+.+++|+|.+++.++.+... ..|+++++.+|+..++.
T Consensus       212 ~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          212 QKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             GGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred             hccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            2356889999999999987643 56899999999866554

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.64  E-value=1.2e-15  Score=140.56  Aligned_cols=201  Identities=13%  Similarity=0.124  Sum_probs=126.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..+++||||    ||+|+||++++++|+++|++|+++.+.... ....       ..++.  ...+.++.+|   .+++.
T Consensus         6 l~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~~~~~v~   74 (259)
T 3edm_A            6 FTNRTIVVA----GAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA-------VAEIEKLGRSALAIKADLTNAAEVE   74 (259)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH-------HHHHHTTTSCCEEEECCTTCHHHHH
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-------HHHHHhcCCceEEEEcCCCCHHHHH
Confidence            356899999    999999999999999999999998554422 2110       01111  2356777887   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHHhCCC--CEEEEecccccc-cCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIY-KPADE  196 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~gv--~~~v~~SS~~vy-~~~~~  196 (401)
                      ++++..     ++|++||+||.                     |+.++.++++++...-.  .+||++||...+ ...  
T Consensus        75 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  152 (259)
T 3edm_A           75 AAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG--  152 (259)
T ss_dssp             HHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS--
T ss_pred             HHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC--
Confidence            666532     48999999983                     46777888888876532  389999998876 321  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH---------h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE---------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e---------~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                +....|.+.|...+         .  .+++..|+||.+..+.............+         ......
T Consensus       153 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~  213 (259)
T 3edm_A          153 ----------PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSL  213 (259)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------------
T ss_pred             ----------CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCC
Confidence                      11245666553322         2  38889999999987643211001111111         112223


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHH
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLD  304 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~  304 (401)
                      ..+.+++|+|++++.++.+... .+|++|++.||...+..
T Consensus       214 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          214 KREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             -CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC--
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCCC
Confidence            4466899999999999976643 56899999998755443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.64  E-value=6.9e-16  Score=146.81  Aligned_cols=225  Identities=16%  Similarity=0.108  Sum_probs=130.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc---hhcCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~D---~~~~~~  146 (401)
                      .+|+||||    ||+|+||++++++|+++|++|+++.|+.........   ..+..   ....++.++.+|   .+++.+
T Consensus         4 ~~k~vlVT----Gas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~---~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~   76 (324)
T 3u9l_A            4 SKKIILIT----GASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNV---EAIAGFARDNDVDLRTLELDVQSQVSVDR   76 (324)
T ss_dssp             -CCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHH---HHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHH---HHHHHHHHhcCCcEEEEEeecCCHHHHHH
Confidence            35789999    999999999999999999999999987532211000   00000   112357777777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+.+++|++||...+....  
T Consensus        77 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~--  154 (324)
T 3u9l_A           77 AIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP--  154 (324)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC--
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC--
Confidence            66532     47999999993                    567777777777    666778999999988764321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC------CcHHHHHHHHHcCCCcccC
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK------DCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~  259 (401)
                               +..+.|.+.|...+            .|+++++|+||.+.++....      ..... .............
T Consensus       155 ---------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  224 (324)
T 3u9l_A          155 ---------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHAR-QAEYEAGPNAGLG  224 (324)
T ss_dssp             ---------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHH-HHHHHHTTTTTHH
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHH-HHhhccccccCCH
Confidence                     11245655553332            38999999999998653211      01111 1111111000000


Q ss_pred             CCCcc-----eeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCC-------HHHHHHHHHHHhCCC
Q 015746          260 GSGMQ-----FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT-------LDGMAKLCAQAAGLP  317 (401)
Q Consensus       260 ~~~~~-----~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t-------~~el~~~i~~~~g~~  317 (401)
                      .+-..     ..+..+++|+|++++.+++.+.......+.++ +....       .+++.+.+.+.+|.+
T Consensus       225 ~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g-p~~~~~~~~~~~~~~~~~~~~~~~g~~  293 (324)
T 3u9l_A          225 EEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD-PAEDGADVGFSVLDRLRAEMLHRVGLS  293 (324)
T ss_dssp             HHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC-TTCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC-CcchHHHHHHHHHHHHHHHHHHHcChH
Confidence            00000     00124889999999999998853322455554 43445       334444444555544

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.64  E-value=1.7e-16  Score=150.99  Aligned_cols=217  Identities=13%  Similarity=0.119  Sum_probs=137.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc-CC-CCC-CCcccchhc--CCCeEEEcC---Hhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MK-KPP-FNRFNEIVS--AGGKTVWGD---PAE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~-~~~-~~~~~~l~~--~~~~~~~~D---~~~  143 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+...... .. ... .....++..  ..+.++.+|   .++
T Consensus        25 l~gk~vlVT----Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           25 VDGRVVIVT----GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ  100 (322)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            346899999    999999999999999999999999987211000 00 000 000111211  245666677   566


Q ss_pred             HHHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC-------C---CCEEEEeccc
Q 015746          144 VGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS-------G---VKQFLFISSA  188 (401)
Q Consensus       144 ~~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~-------g---v~~~v~~SS~  188 (401)
                      +.++++..     ++|+|||+||.                    |+.++.++++++...       +   -.+||++||.
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            66665532     47999999994                    456666666665332       1   1489999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc
Q 015746          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV  256 (401)
Q Consensus       189 ~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~  256 (401)
                      ..+....            ....|.+.|...+            .|++++.|+|| +..+........ ..         
T Consensus       181 ~~~~~~~------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-~~---------  237 (322)
T 3qlj_A          181 AGLQGSV------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-MM---------  237 (322)
T ss_dssp             HHHHCBT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------
T ss_pred             HHccCCC------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-hh---------
Confidence            7664321            1245665553322            38999999999 654432211000 00         


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC-----------------CHHHHHHHHHHHhCCCc
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV-----------------TLDGMAKLCAQAAGLPV  318 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~-----------------t~~el~~~i~~~~g~~~  318 (401)
                         ......+.+++++|+|++++.++..... ..|++|++.+|...                 +..|+++.+.+.+|.+.
T Consensus       238 ---~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~  314 (322)
T 3qlj_A          238 ---ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKAR  314 (322)
T ss_dssp             ---------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSC
T ss_pred             ---hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccC
Confidence               0111223456899999999999876554 56799999987644                 78999999999998543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.64  E-value=5e-15  Score=139.13  Aligned_cols=199  Identities=15%  Similarity=0.094  Sum_probs=134.8

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|  +||++++++|+++|++|++++|+.+....+..     ... ....+.++.+|   .+++.+
T Consensus        28 l~~k~vlVT----Gasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dv~d~~~v~~   97 (296)
T 3k31_A           28 MEGKKGVII----GVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDP-----LAE-SLGVKLTVPCDVSDAESVDN   97 (296)
T ss_dssp             TTTCEEEEE----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----HHH-HHTCCEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEE----eCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHH-hcCCeEEEEcCCCCHHHHHH
Confidence            446899999    9998  99999999999999999999998643221110     000 11245677777   666666


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhCC--CCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|++||+||.                        |+.++.++++++...-  ..+||++||...+....
T Consensus        98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~  177 (296)
T 3k31_A           98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP  177 (296)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC
Confidence            66543     57999999984                        3556777888776542  24899999988764321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~  262 (401)
                                  ....|.+.|...+            .|++++.|+||.+.++...... ...+...+....++..    
T Consensus       178 ------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r----  241 (296)
T 3k31_A          178 ------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRR----  241 (296)
T ss_dssp             ------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSS----
T ss_pred             ------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCC----
Confidence                        1255666553322            2899999999999987543321 1222333333333322    


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                           +..++|+|++++.++.+... .+|+++++.+|..+
T Consensus       242 -----~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          242 -----NTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             -----CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -----CCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence                 34789999999999986543 56899999998643

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.64  E-value=6.7e-15  Score=137.28  Aligned_cols=197  Identities=16%  Similarity=0.129  Sum_probs=129.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+.. ..+       ..++.  ...+.++.+|   .+++.
T Consensus        27 ~~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~   95 (283)
T 1g0o_A           27 LEGKVALVT----GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV-------VAAIKKNGSDAACVKANVGVVEDIV   95 (283)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH-------HHHHHHhCCCeEEEEcCCCCHHHHH
Confidence            346899999    9999999999999999999999999986431 110       01111  1246667777   55555


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++++..     ++|+|||+||.                    |+.++.++++++...  +..+||++||...+....   
T Consensus        96 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---  172 (283)
T 1g0o_A           96 RMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV---  172 (283)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC---
Confidence            554421     47999999994                    467777888887765  556999999987653221   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC----------CcHHHHHHHHHc--CC
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVR--KR  254 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~--~~  254 (401)
                              +....|...|...+            .|+++++|+||.+.++....          .........+..  ..
T Consensus       173 --------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T 1g0o_A          173 --------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS  244 (283)
T ss_dssp             --------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC
Confidence                    01245555553322            38999999999998762100          000111122222  22


Q ss_pred             CcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       255 ~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +.         ..+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       245 p~---------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          245 PL---------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             TT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CC---------CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            21         2356899999999999986543 557999999875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.64  E-value=1.7e-15  Score=140.06  Aligned_cols=194  Identities=15%  Similarity=0.183  Sum_probs=131.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      .++++||||    ||+|+||++++++|+++|++|+++.+.. +.....       ..++.  ..++.++.+|   .+++.
T Consensus        24 l~~k~vlVT----Gas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~Dl~~~~~~~   92 (267)
T 4iiu_A           24 AMSRSVLVT----GASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET-------LNAIVANGGNGRLLSFDVANREQCR   92 (267)
T ss_dssp             -CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH-------HHHHHhcCCceEEEEecCCCHHHHH
Confidence            456889999    9999999999999999999998866543 222110       11111  2356777777   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH-----hCCCCEEEEecccccccCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~-----~~gv~~~v~~SS~~vy~~~~  195 (401)
                      ++++..     ++|+|||+||.                    |+.++.++++++.     +.+..+||++||...+....
T Consensus        93 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  172 (267)
T 4iiu_A           93 EVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR  172 (267)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC
Confidence            665532     47999999994                    4566677777653     45556999999977654321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                  ....|+..|...         +   .|+++.+|+||.+.++.....  ......+....+..      
T Consensus       173 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~~------  232 (267)
T 4iiu_A          173 ------------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPMK------  232 (267)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTTC------
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCCC------
Confidence                        125566666422         2   289999999999998864432  33344444444432      


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                         .+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       233 ---~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          233 ---RMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             ---SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ---CCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence               345899999999999986543 567999999873

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.63  E-value=4.2e-16  Score=142.57  Aligned_cols=194  Identities=14%  Similarity=0.203  Sum_probs=128.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++.....       .++ ...+.++.+|   .+++.+++
T Consensus         4 l~gk~vlVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~   71 (247)
T 3rwb_A            4 LAGKTALVT----GAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA-------ASI-GKKARAIAADISDPGSVKALF   71 (247)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHH-CTTEEECCCCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHH
Confidence            457899999    99999999999999999999999999875443211       111 2345566666   66666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~g-v~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||+||.                    |+.++.+++++    +++.+ ..++|++||...+....   
T Consensus        72 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  148 (247)
T 3rwb_A           72 AEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP---  148 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT---
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC---
Confidence            532     47999999994                    45555555555    55555 56999999988764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC-CCcccCCCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  265 (401)
                               ....|.+.|...         |   .|++++.|+||.+.++........ ........ .++         
T Consensus       149 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~---------  209 (247)
T 3rwb_A          149 ---------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVEMLQAM---------  209 (247)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHHHHSSS---------
T ss_pred             ---------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHhccccc---------
Confidence                     124566655322         2   389999999999987521110000 00011110 111         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..+.+++|+|+++..++.+... ..|+++++.+|.
T Consensus       210 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          210 KGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            2245799999999999987644 568999999874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.63  E-value=6.9e-16  Score=143.09  Aligned_cols=197  Identities=14%  Similarity=0.130  Sum_probs=126.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+.. +.+..    .+.. ....+.++.+|   .+++.++
T Consensus        27 l~~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           27 FTGKNVLIT----GASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKN----ELEE-KGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             CSCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHH-TTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH----HHHh-cCCceEEEECCCCCHHHHHHH
Confidence            346899999    9999999999999999999999999965322 11100    0000 12356777777   5556665


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|+|||+||.                    |+.++.+++++    +++.+..+||++||...+....   
T Consensus        98 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  174 (271)
T 4iin_A           98 IQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM---  174 (271)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC---
Confidence            5432     47999999994                    34444444444    4455667999999987664321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|.+.|...+            .++++..|+||.+..+.... ....+....         .......
T Consensus       175 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~---------~~~~~~~  235 (271)
T 4iin_A          175 ---------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-LKDELKADY---------VKNIPLN  235 (271)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------C---------GGGCTTC
T ss_pred             ---------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-hcHHHHHHH---------HhcCCcC
Confidence                     1245665553322            37899999999998764221 001111111         1111223


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       236 ~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          236 RLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            467899999999999987644 568999999875

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.63  E-value=1.7e-15  Score=140.18  Aligned_cols=181  Identities=16%  Similarity=0.136  Sum_probs=121.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++...+.           ..++.++.+|   .+++.+++
T Consensus        14 ~~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~   78 (266)
T 3p19_A           14 SMKKLVVIT----GASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-----------LPNTLCAQVDVTDKYTFDTAI   78 (266)
T ss_dssp             -CCCEEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-----------CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-----------cCCceEEEecCCCHHHHHHHH
Confidence            346889999    99999999999999999999999999875543321           1255666777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHH----HHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~l----l~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|+|||+||.                    |+.++.++    +..+++.+..+||++||...+....    
T Consensus        79 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----  154 (266)
T 3p19_A           79 TRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP----  154 (266)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT----
T ss_pred             HHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC----
Confidence            532     47999999994                    34555554    4444566777999999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|...+            .|++++.|+||.+.++................ ...+       ...
T Consensus       155 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~-------~~r  218 (266)
T 3p19_A          155 --------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDA-WRVD-------MGG  218 (266)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHH-HHHH-------TTC
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHh-hccc-------ccC
Confidence                    1245665553322            38999999999998874321111111111111 0001       123


Q ss_pred             eeeHHHHHHHHHHHhcCCCc
Q 015746          268 IAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~  287 (401)
                      +++++|+|++++.+++++..
T Consensus       219 ~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          219 VLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             CBCHHHHHHHHHHHHHSCTT
T ss_pred             CCCHHHHHHHHHHHHcCCCC
Confidence            57899999999999998876

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.63  E-value=2.8e-15  Score=139.37  Aligned_cols=199  Identities=14%  Similarity=0.125  Sum_probs=131.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+....+..    .... ....+.++.+|   .+++.+++
T Consensus        32 l~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~~~  102 (279)
T 3ctm_A           32 LKGKVASVT----GSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEH----LQKT-YGVHSKAYKCNISDPKSVEETI  102 (279)
T ss_dssp             CTTCEEEET----TTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHH----HHHH-HCSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCcceEEEeecCCHHHHHHHH
Confidence            446899999    999999999999999999999999998754332110    0000 12356777777   56666666


Q ss_pred             cCC-----cccEEEeCCCC----------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~----------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +..     ++|+|||+||.                      |+.+    ++++++.+++.+.++||++||...+....  
T Consensus       103 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--  180 (279)
T 3ctm_A          103 SQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI--  180 (279)
T ss_dssp             HHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----
T ss_pred             HHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC--
Confidence            542     37999999873                      1223    56788888877778999999987653310  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                              .+....|...|...+            .+ ++++|+||.+.++..... ...+...+....+.         
T Consensus       181 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~---------  241 (279)
T 3ctm_A          181 --------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDMKAKWWQLTPL---------  241 (279)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHHHHHHHHHSTT---------
T ss_pred             --------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHHHHHHHHhCCc---------
Confidence                    011244555553322            25 899999999988753221 12222222221221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ..+++++|+|++++.++..+.. ..|+++++.+|..
T Consensus       242 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          242 GREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            2367899999999999986543 4579999998854

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.63  E-value=3.1e-15  Score=138.12  Aligned_cols=200  Identities=10%  Similarity=0.059  Sum_probs=133.1

Q ss_pred             cccCeEEEEecCCCcccc--chHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~--iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+  ||++++++|+++|++|++++|+......+..    ........++.++.+|   .+++.+
T Consensus         5 l~~k~vlVT----Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~   76 (266)
T 3oig_A            5 LEGRNIVVM----GVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHE----LAGTLDRNDSIILPCDVTNDAEIET   76 (266)
T ss_dssp             CTTCEEEEE----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HHHTSSSCCCEEEECCCSSSHHHHH
T ss_pred             cCCCEEEEE----cCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHH----HHHhcCCCCceEEeCCCCCHHHHHH
Confidence            346899999    99988  9999999999999999999987633221110    0011111257788887   566666


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhCC--CCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~g--v~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|+|||+||.                        |+.++.++++++...-  -.+||++||...+....
T Consensus        77 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  156 (266)
T 3oig_A           77 CFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP  156 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT
T ss_pred             HHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC
Confidence            55432     47999999983                        3455667777776652  24899999988764321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~  262 (401)
                                  ....|.+.|...+            .|++++.|+||.+..+..... ....+...+....+.      
T Consensus       157 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------  218 (266)
T 3oig_A          157 ------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL------  218 (266)
T ss_dssp             ------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT------
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC------
Confidence                        1245665553322            379999999999988643221 122333444333332      


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                         ..+.+++|+|++++.++.+... ..|+++++.+|..
T Consensus       219 ---~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          219 ---RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ---CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence               1245899999999999986543 5679999998853

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.63  E-value=1.1e-15  Score=139.24  Aligned_cols=186  Identities=17%  Similarity=0.142  Sum_probs=127.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---H
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---P  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~  141 (401)
                      +|+||||    ||+|+||++++++|+++|+       +|++++|+.++...+.       .++.  ...+.++.+|   +
T Consensus         2 ~k~vlIT----GasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~   70 (244)
T 2bd0_A            2 KHILLIT----GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-------LECRAEGALTDTITADISDM   70 (244)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-------HHHHTTTCEEEEEECCTTSH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHH-------HHHHccCCeeeEEEecCCCH
Confidence            4789999    9999999999999999999       9999999765432211       1111  1246677777   5


Q ss_pred             hhHHHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEeccccccc
Q 015746          142 AEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYK  192 (401)
Q Consensus       142 ~~~~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~  192 (401)
                      +++.++++..     ++|+|||+||.                    |+.++.++++++.    +.+.++||++||...+.
T Consensus        71 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  150 (244)
T 2bd0_A           71 ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK  150 (244)
T ss_dssp             HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC
Confidence            5666665421     47999999983                    4556666666653    44667999999988875


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCC
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  260 (401)
                      ...            ....|...|...+            .|++++++|||.++++.....          . ..     
T Consensus       151 ~~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~-~~-----  202 (244)
T 2bd0_A          151 AFR------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV----------D-DE-----  202 (244)
T ss_dssp             CCT------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC----------C-ST-----
T ss_pred             CCC------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc----------c-cc-----
Confidence            321            1244555553222            378999999999999853221          0 00     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                       .  ...+++++|+|++++.++..+.. ..|+++...+++.+
T Consensus       203 -~--~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          203 -M--QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             -T--GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             -c--cccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence             0  12578999999999999987654 33577777766554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.63  E-value=3.1e-15  Score=139.06  Aligned_cols=199  Identities=15%  Similarity=0.147  Sum_probs=132.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+....+..    .+.. ....+.++.+|   .+++.+++
T Consensus        30 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~d~~~v~~~~  100 (276)
T 3r1i_A           30 LSGKRALIT----GASTGIGKKVALAYAEAGAQVAVAARHSDALQVVAD----EIAG-VGGKALPIRCDVTQPDQVRGML  100 (276)
T ss_dssp             CTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH----HHHH-TTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCeEEEEEcCCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998765432211    0111 11356777787   66666666


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCC-CEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGV-KQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv-~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+||.                    |+.++.++++++.    +.+. .++|++||...+.....  
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--  178 (276)
T 3r1i_A          101 DQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--  178 (276)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC--
Confidence            532     47999999994                    4555555555543    3332 58999999876533210  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                              +....|.+.|...+            .|++++.|+||.|..+....  ...+...+....++         .
T Consensus       179 --------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--~~~~~~~~~~~~p~---------~  239 (276)
T 3r1i_A          179 --------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP--LADYHALWEPKIPL---------G  239 (276)
T ss_dssp             --------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG--GGGGHHHHGGGSTT---------S
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc--chHHHHHHHhcCCC---------C
Confidence                    11245665553322            38999999999998875322  11122333333332         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      .+.+++|+|++++.++.+... ..|+++++.+|..
T Consensus       240 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          240 RMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence            355789999999999986543 5689999998853

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.63  E-value=1.1e-15  Score=142.72  Aligned_cols=222  Identities=16%  Similarity=0.164  Sum_probs=136.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC-CCccc----ch--hcCCCeEEEcC---H
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFN----EI--VSAGGKTVWGD---P  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~l--~~~~~~~~~~D---~  141 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+........... .....    ++  ....+.++.+|   .
T Consensus         8 l~gk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            8 VQDKVVLVT----GGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            346899999    99999999999999999999999998753221110000 00000    11  12356777777   5


Q ss_pred             hhHHHhhcCC-----cccEEEeCCCC------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCC
Q 015746          142 AEVGNVVGGV-----TFDVVLDNNGK------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       142 ~~~~~~~~~~-----~~d~Vv~~a~~------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++.++++..     ++|+|||+||.                  |+.++.++++++...  +..++|++||...+.....
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  163 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ  163 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc
Confidence            6666655532     47999999994                  467778888888764  2348999999887654322


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC---CC-----c
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK---RP-----V  256 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~---~~-----~  256 (401)
                      .+..+..+. +....|.+.|...+            .|+++..|+||.+.++.......   .......   ..     .
T Consensus       164 ~~~~~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~  239 (287)
T 3pxx_A          164 PPGAGGPQG-PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM---YRQFRPDLEAPSRADALL  239 (287)
T ss_dssp             CC-----CH-HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHH
T ss_pred             cccccccCC-CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch---hhhhccccccchhHHHHh
Confidence            222222211 12245666553322            28999999999999885432100   1111100   00     0


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ...........+.+++|+|++++.++.+... ..|+++++.+|..+
T Consensus       240 ~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          240 AFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            0000011114578999999999999976543 56899999998643

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.62  E-value=2.3e-15  Score=135.41  Aligned_cols=181  Identities=14%  Similarity=0.128  Sum_probs=126.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~-  151 (401)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+                      ....|++++.++++.. 
T Consensus         5 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g   58 (223)
T 3uce_A            5 DKTVYVVL----GGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIG   58 (223)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhC
Confidence            45789999    99999999999999999999999998763                      1112677777776543 


Q ss_pred             cccEEEeCCCC---------------------ChhhHHHHHHHHHhCCC--CEEEEecccccccCCCCCCCCCCCCCCCC
Q 015746          152 TFDVVLDNNGK---------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (401)
Q Consensus       152 ~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~gv--~~~v~~SS~~vy~~~~~~~~~E~~~~~~~  208 (401)
                      ++|++||+||.                     |+.++.++++++...-.  .++|++||...+....            .
T Consensus        59 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~  126 (223)
T 3uce_A           59 AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA------------N  126 (223)
T ss_dssp             SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT------------T
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC------------C
Confidence            48999999993                     46677788888766522  3899999988765421            1


Q ss_pred             CChHHHHHHH---------HHhC-CCeEEEecCeeecCCCCCCc---HHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          209 AGHVQVEKYI---------SENF-SNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       209 ~~~~~~ek~~---------~e~g-~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                      ...|.+.|..         .|.+ +++..|+||.+.++......   ...+........+.         ..+.+++|+|
T Consensus       127 ~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA  197 (223)
T 3uce_A          127 TYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIA  197 (223)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHH
Confidence            2455555533         2333 88999999999987432211   11223333333332         2355899999


Q ss_pred             HHHHHHhcCCCcCCCcEEEecCCCCC
Q 015746          276 SMLTLAVENPEAASSNIFNLVSDRAV  301 (401)
Q Consensus       276 ~~~~~~~~~~~~~~g~~~~~~~~~~~  301 (401)
                      ++++.+++. ...+|+++++.+|..+
T Consensus       198 ~~~~~l~~~-~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          198 MAYLFAIQN-SYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHHHHHHHC-TTCCSCEEEESTTGGG
T ss_pred             HHHHHHccC-CCCCCcEEEecCCeec
Confidence            999999984 3345799999998654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.62  E-value=1.5e-15  Score=141.50  Aligned_cols=198  Identities=16%  Similarity=0.169  Sum_probs=119.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|.. +....+       ..++.  ...+.++.+|   .+++.
T Consensus        27 ~~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~d~~~v~   95 (280)
T 4da9_A           27 KARPVAIVT----GGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV-------IAELSGLGARVIFLRADLADLSSHQ   95 (280)
T ss_dssp             CCCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH-------HHHHHHTTCCEEEEECCTTSGGGHH
T ss_pred             cCCCEEEEe----cCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH-------HHHHHhcCCcEEEEEecCCCHHHHH
Confidence            346789999    9999999999999999999999999643 222211       01111  2356777777   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC----------------------ChhhHHHHHHHH----HhCC---CCEEEEecccccc
Q 015746          146 NVVGGV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSG---VKQFLFISSAGIY  191 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~aa----~~~g---v~~~v~~SS~~vy  191 (401)
                      ++++..     ++|+|||+||.                      |+.++.++++++    ++.+   ..+||++||...+
T Consensus        96 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A           96 ATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             HHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            666532     47999999984                      355555555544    3333   4589999998765


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccC
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  259 (401)
                      ....            ....|.+.|...+            .|+++..|+||.+.++..... ...+...+..       
T Consensus       176 ~~~~------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~-------  235 (280)
T 4da9_A          176 MTSP------------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV-SGKYDGLIES-------  235 (280)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------
T ss_pred             cCCC------------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc-chhHHHHHhh-------
Confidence            3321            1245665553322            378999999999988743211 1111111111       


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                       .......+.+++|+|++++.++.+... ..|+++++.+|..+
T Consensus       236 -~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          236 -GLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             -------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             -cCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence             011223466899999999999987654 56799999988643

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=5.4e-16  Score=144.47  Aligned_cols=197  Identities=18%  Similarity=0.155  Sum_probs=127.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--C---CCeEEEcC---Hhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--A---GGKTVWGD---PAE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~---~~~~~~~D---~~~  143 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++..  .   ++.++.+|   .++
T Consensus         4 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dv~~~~~   72 (280)
T 1xkq_A            4 FSNKTVIIT----GSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-------QIILKSGVSEKQVNSVVADVTTEDG   72 (280)
T ss_dssp             TTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTTCCGGGEEEEECCTTSHHH
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHHcCCCCcceEEEEecCCCHHH
Confidence            346899999    99999999999999999999999999875433211       11111  1   46677777   566


Q ss_pred             HHHhhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHh----CCCCEEEEeccccc
Q 015746          144 VGNVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKS----SGVKQFLFISSAGI  190 (401)
Q Consensus       144 ~~~~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~v  190 (401)
                      +.++++..     ++|+|||+||.                        |+.++.++++++..    .+ ++||++||...
T Consensus        73 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~  151 (280)
T 1xkq_A           73 QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA  151 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc
Confidence            66665432     47999999984                        23445555555443    34 69999999887


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC--cH------HHHHHHH
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD--CE------EWFFDRI  250 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~--~~------~~~~~~~  250 (401)
                      +....           +....|...|...+            .|+++++|+||+++++.....  ..      ..+...+
T Consensus       152 ~~~~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  220 (280)
T 1xkq_A          152 GPQAQ-----------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH  220 (280)
T ss_dssp             SSSCC-----------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             cCCCC-----------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHH
Confidence            64320           11245555553322            389999999999998732110  00      0111111


Q ss_pred             HcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC-C-cCCCcEEEecCCCC
Q 015746          251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLVSDRA  300 (401)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~-~-~~~g~~~~~~~~~~  300 (401)
                      ....+         ...+.+++|+|++++.++..+ . ...|+++++.+|..
T Consensus       221 ~~~~p---------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          221 KECIP---------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             TTTCT---------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HcCCC---------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            11111         124679999999999998764 2 34579999998854

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.62  E-value=3.4e-15  Score=138.34  Aligned_cols=199  Identities=15%  Similarity=0.127  Sum_probs=129.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+|++|||    ||+|+||++++++|+++|++|++++++... ...+..    .+.. ...++.++.+|   .+++.++
T Consensus        16 l~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~~~~~v~~~   86 (270)
T 3is3_A           16 LDGKVALVT----GSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVS----EIKA-LGSDAIAIKADIRQVPEIVKL   86 (270)
T ss_dssp             CTTCEEEES----CTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHH-TTCCEEEEECCTTSHHHHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHh-cCCcEEEEEcCCCCHHHHHHH
Confidence            457899999    999999999999999999999998775432 111100    0000 12356777777   5666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCC--CEEEEecccccccCCCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv--~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ++..     ++|++||+||.                    |+.++.++++++...-.  .++|++||.......      
T Consensus        87 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  160 (270)
T 3is3_A           87 FDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS------  160 (270)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC------
Confidence            6532     47999999994                    56677778887766532  389999997632111      


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCC-----------CCcHHHHHHHHHcCCCcc
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN-----------KDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~  257 (401)
                           .+....|.+.|...+            .|+++..|+||.+.++...           ..........+....++ 
T Consensus       161 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-  234 (270)
T 3is3_A          161 -----VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-  234 (270)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT-
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC-
Confidence                 012255666653322            3899999999999887421           00111122222222222 


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                              ..+.+++|+|++++.++.+... .+|+++++.+|.
T Consensus       235 --------~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          235 --------HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             --------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             --------CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence                    2345799999999999976543 568999999874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.62  E-value=3e-15  Score=139.67  Aligned_cols=203  Identities=17%  Similarity=0.174  Sum_probs=131.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++.  ...+.++.+|   .+++.++
T Consensus        27 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   95 (283)
T 3v8b_A           27 PSPVALIT----GAGSGIGRATALALAADGVTVGALGRTRTEVEEVA-------DEIVGAGGQAIALEADVSDELQMRNA   95 (283)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHTTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            45789999    99999999999999999999999999875543211       1111  1245677777   5666666


Q ss_pred             hcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|++||+||.                     |+.++.++++++    ++.+..+||++||...+..... 
T Consensus        96 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~-  174 (283)
T 3v8b_A           96 VRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT-  174 (283)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS-
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC-
Confidence            6532     47999999994                     355666666665    5566679999999876531110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               +....|.+.|...+            .|+++..|+||.+..+.........   ......+..........
T Consensus       175 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~p~  242 (283)
T 3v8b_A          175 ---------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH---EEETAIPVEWPKGQVPI  242 (283)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC---HHHHSCCCBCTTCSCGG
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc---chhhhhhhhhhhhcCcc
Confidence                     12255666664332            2788999999999887433210000   00001111111111111


Q ss_pred             --eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 --TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 --~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        ..+..++|+|++++.++.+... ..|+++++.+|.
T Consensus       243 ~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          243 TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence              3456899999999999886544 568999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.62  E-value=2.6e-15  Score=138.04  Aligned_cols=194  Identities=14%  Similarity=0.169  Sum_probs=124.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|..+....          + ....+.++.+|   .+++.+++
T Consensus         7 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~-~~~~~~~~~~D~~~~~~v~~~~   71 (257)
T 3tl3_A            7 IRDAVAVVT----GGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA----------D-LGDRARFAAADVTDEAAVASAL   71 (257)
T ss_dssp             ---CEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH----------H-TCTTEEEEECCTTCHHHHHHHH
T ss_pred             ecCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH----------h-cCCceEEEECCCCCHHHHHHHH
Confidence            346889999    999999999999999999999999995532211          1 12356777777   55666555


Q ss_pred             cCC----cccEEEeCCCC------------------------ChhhHHHHHHHHHh------------CCCCEEEEeccc
Q 015746          149 GGV----TFDVVLDNNGK------------------------NLDAVRPVADWAKS------------SGVKQFLFISSA  188 (401)
Q Consensus       149 ~~~----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~------------~gv~~~v~~SS~  188 (401)
                      +..    ++|++||+||.                        |+.++.++++++..            .+..+||++||.
T Consensus        72 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  151 (257)
T 3tl3_A           72 DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASV  151 (257)
T ss_dssp             HHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCC
T ss_pred             HHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcch
Confidence            421    47999999983                        34555566665543            233489999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc
Q 015746          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV  256 (401)
Q Consensus       189 ~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~  256 (401)
                      ..+....            ....|.+.|...+            .|++++.|+||.+..+.... ........+....+.
T Consensus       152 ~~~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~  218 (257)
T 3tl3_A          152 AAFDGQI------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH  218 (257)
T ss_dssp             C--CCHH------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS
T ss_pred             hhcCCCC------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC
Confidence            7663321            1134555553222            38999999999998875332 112223333333322


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t  302 (401)
                        .      ..+.+++|+|++++.++++ ...+|+++++.+|..+.
T Consensus       219 --~------~r~~~p~dva~~v~~l~s~-~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          219 --P------SRLGNPDEYGALAVHIIEN-PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             --S------CSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTC---
T ss_pred             --C------CCccCHHHHHHHHHHHhcC-CCCCCCEEEECCCccCC
Confidence              1      2356899999999999987 44557999999986543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.62  E-value=8.2e-15  Score=136.10  Aligned_cols=194  Identities=12%  Similarity=0.093  Sum_probs=129.4

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~  145 (401)
                      .+++||||    ||+  |+||++++++|+++|++|++++|+.+ ...       ...++..  .++.++.+|   .+++.
T Consensus         5 ~~k~vlVT----Gas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~-------~~~~l~~~~~~~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            5 KGKKGLIV----GVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEK-------RVRPIAQELNSPYVYELDVSKEEHFK   72 (275)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THH-------HHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHH-------HHHHHHHhcCCcEEEEcCCCCHHHHH
Confidence            46899999    999  99999999999999999999999874 111       1111111  236777777   55666


Q ss_pred             HhhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPA  194 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~  194 (401)
                      ++++..     ++|+|||+||.                        |+.++.++++++...  .-.+||++||...+...
T Consensus        73 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           73 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC
Confidence            665432     48999999984                        345667788877665  11489999997765322


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCC
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGS  261 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~  261 (401)
                                  +....|...|...+            .|+++++|+||.+.++..... ....+...+....++.    
T Consensus       153 ------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~----  216 (275)
T 2pd4_A          153 ------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR----  216 (275)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS----
T ss_pred             ------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcC----
Confidence                        11244555553322            289999999999998743211 1122333333333321    


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                           .+.+++|+|++++.++..... ..|+++++.++.
T Consensus       217 -----~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          217 -----KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             -----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -----CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence                 245789999999999976433 457999999875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.61  E-value=8.5e-15  Score=133.94  Aligned_cols=189  Identities=16%  Similarity=0.172  Sum_probs=121.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ..++.++.+|   .+++.++++..
T Consensus         1 k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   68 (248)
T 3asu_A            1 MIVLVT----GATAGFGECITRRFIQQGHKVIATGRRQERLQELK-------DEL-GDNLYIAQLDVRNRAAIEEMLASL   68 (248)
T ss_dssp             CEEEET----TTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHHHTS
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-cCceEEEEcCCCCHHHHHHHHHHH
Confidence            579999    99999999999999999999999999875432211       111 1356677777   67777776643


Q ss_pred             -----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCCC
Q 015746          152 -----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       152 -----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                           ++|++||+||.                     |+.++.++++++    ++.+..+||++||...+...       
T Consensus        69 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  141 (248)
T 3asu_A           69 PAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-------  141 (248)
T ss_dssp             CTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-------
T ss_pred             HHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC-------
Confidence                 58999999984                     234444555544    34566799999998876432       


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeec-CCCCCCcHHHHHHHHHcCCCc-ccCCCCcceee
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIG-SGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTN  267 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  267 (401)
                           +....|...|...+            .|++++.|+||.+.| +.....     ...  ..... ..+    ....
T Consensus       142 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~-----~~~--~~~~~~~~~----~~~~  205 (248)
T 3asu_A          142 -----AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR-----FKG--DDGKAEKTY----QNTV  205 (248)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---------------------------------C
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc-----ccC--chHHHHHHH----hccC
Confidence                 11245555553322            279999999999984 421110     000  00000 000    0122


Q ss_pred             eeeHHHHHHHHHHHhcCCCcCCCcEEEecCC
Q 015746          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~  298 (401)
                      +++++|+|++++.++.++....|+.+.+...
T Consensus       206 ~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          206 ALTPEDVSEAVWWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             CBCHHHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred             CCCHHHHHHHHHHHhcCCccceeeEEEEccc
Confidence            4689999999999999876666778877654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.61  E-value=3.9e-15  Score=138.46  Aligned_cols=211  Identities=12%  Similarity=0.057  Sum_probs=130.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCC--CCCccc----chh--cCCCeEEEcC---
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFN----EIV--SAGGKTVWGD---  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~--~~~~~~----~l~--~~~~~~~~~D---  140 (401)
                      ..++++|||    ||+|+||++++++|+++|++|++++|..+........  ......    .+.  ...+.++.+|   
T Consensus         9 l~~k~~lVT----Gas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            9 LEGRVAFIT----GAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cCCCEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            346899999    9999999999999999999999999854321110000  000001    111  2356677777   


Q ss_pred             HhhHHHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CCEEEEeccccc
Q 015746          141 PAEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGI  190 (401)
Q Consensus       141 ~~~~~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~g-v~~~v~~SS~~v  190 (401)
                      .+++.++++..     ++|++||+||.                    |+.++.+++++    +++.+ ..+||++||...
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence            56666655431     47999999994                    45555555555    44433 358999999887


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc-c
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-P  257 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~  257 (401)
                      +....            ....|.+.|...+            .|+++..|+||.+.++.................... .
T Consensus       165 ~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  232 (277)
T 3tsc_A          165 MKMQP------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSH  232 (277)
T ss_dssp             TSCCS------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTT
T ss_pred             CCCCC------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHH
Confidence            64321            1245666553322            389999999999988743321111111111111111 1


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ........ .+.+++|+|++++.++.+... ..|+++++.+|.
T Consensus       233 ~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          233 VLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             TTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            11211122 378999999999999987654 568999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.61  E-value=4e-14  Score=128.07  Aligned_cols=190  Identities=16%  Similarity=0.177  Sum_probs=133.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.+......           ...+..+.+|   +++++++++
T Consensus        10 ~GK~alVT----Gas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~   74 (242)
T 4b79_A           10 AGQQVLVT----GGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFE   74 (242)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHH
Confidence            57999999    99999999999999999999999999887654321           1255666666   777888776


Q ss_pred             CC-cccEEEeCCCC------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCC
Q 015746          150 GV-TFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (401)
Q Consensus       150 ~~-~~d~Vv~~a~~------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~  206 (401)
                      .. ++|++||+||.                  |+.+    ++.++..+++.+ .++|++||...+....           
T Consensus        75 ~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~-----------  142 (242)
T 4b79_A           75 ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSA-----------  142 (242)
T ss_dssp             HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCS-----------
T ss_pred             hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCC-----------
Confidence            65 48999999995                  3333    344444444444 5899999977643321           


Q ss_pred             CCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          207 PDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       207 ~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                       ....|.+.|..         .|   +|+++..|.||.+..+..... .-....+.+....|+..++         .++|
T Consensus       143 -~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g---------~pee  212 (242)
T 4b79_A          143 -DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWG---------EAPE  212 (242)
T ss_dssp             -SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCB---------CHHH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCc---------CHHH
Confidence             12566666632         22   389999999999987632211 1123345566666665444         6899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +|.+++.++.+... ..|+++.+.+|.
T Consensus       213 iA~~v~fLaSd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          213 VASAAAFLCGPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCccCceEEECccH
Confidence            99999999876654 568999999873

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.61  E-value=5.1e-15  Score=138.87  Aligned_cols=198  Identities=14%  Similarity=0.109  Sum_probs=130.4

Q ss_pred             cccCeEEEEecCCCcccc--chHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~--iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+  ||++++++|+++|++|++++|+......+.     .+.. ....+.++.+|   .+++.+
T Consensus        29 l~gk~~lVT----Gasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~Dv~d~~~v~~   98 (293)
T 3grk_A           29 LQGKRGLIL----GVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVE-----PLAE-ELGAFVAGHCDVADAASIDA   98 (293)
T ss_dssp             TTTCEEEEE----CCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHH-----HHHH-HHTCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----cCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHH-hcCCceEEECCCCCHHHHHH
Confidence            456899999    99988  999999999999999999998853211110     0000 01246677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|++||+||.                        |+.++.++++++...  ...+||++||...+....
T Consensus        99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~  178 (293)
T 3grk_A           99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP  178 (293)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT
T ss_pred             HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC
Confidence            65532     48999999984                        355666777776553  234899999988764321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~  262 (401)
                                  ....|.+.|...+            .|+++..|+||.+.++..... ....+...+....++.     
T Consensus       179 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~-----  241 (293)
T 3grk_A          179 ------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLR-----  241 (293)
T ss_dssp             ------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTS-----
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCC-----
Confidence                        1255666553322            389999999999988743221 1222333343333332     


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                          .+..++|+|++++.++.+... .+|+++++.+|..
T Consensus       242 ----r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          242 ----RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             ----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ----CCCCHHHHHHHHHHHcCccccCCcceEEEECCCcc
Confidence                245789999999999986543 5689999999864

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.61  E-value=3.7e-15  Score=137.68  Aligned_cols=202  Identities=10%  Similarity=0.092  Sum_probs=130.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++......    .+.. .....+.++.+|   .+++.++
T Consensus         6 l~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (265)
T 3lf2_A            6 LSEAVAVVT----GGSSGIGLATVELLLEAGAAVAFCARDGERLRAAES----ALRQRFPGARLFASVCDVLDALQVRAF   77 (265)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCceEEEEeCCCCCHHHHHHH
Confidence            456899999    999999999999999999999999998754432110    0111 111236677777   5556655


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+....   
T Consensus        78 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  154 (265)
T 3lf2_A           78 AEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP---  154 (265)
T ss_dssp             HHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC---
Confidence            5432     47999999994                    455666666655    444556899999987764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC---------CcHHHHHHHHHcCCCcc
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~  257 (401)
                               ....|.+.|...+            .|+++..|+||.+.++....         .....+...+......+
T Consensus       155 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  225 (265)
T 3lf2_A          155 ---------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP  225 (265)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT
T ss_pred             ---------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC
Confidence                     1245665553322            28999999999998752100         00111111111111111


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                             ...+.+++|+|++++.++.+... .+|+++++.+|..
T Consensus       226 -------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          226 -------LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             -------TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             -------cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence                   12356899999999999986543 5689999998853

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.61  E-value=5e-15  Score=141.12  Aligned_cols=196  Identities=12%  Similarity=0.083  Sum_probs=128.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcccchh---cCCCeEEEcC---Hh--
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV---SAGGKTVWGD---PA--  142 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D---~~--  142 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++ |+.+....+.       .++.   ...+.++.+|   .+  
T Consensus        44 l~~k~~lVT----Gas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~Dl~d~~~~  112 (328)
T 2qhx_A           44 PTVPVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-------ATLNARRPNSAITVQADLSNVATA  112 (328)
T ss_dssp             -CCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHHSTTCEEEEECCCSSSCBC
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhhcCCeEEEEEeeCCCchhc
Confidence            345789999    9999999999999999999999999 8764432211       1111   1246666776   45  


Q ss_pred             ---------------hHHHhhcCC-----cccEEEeCCCCC----------------------------------hhhHH
Q 015746          143 ---------------EVGNVVGGV-----TFDVVLDNNGKN----------------------------------LDAVR  168 (401)
Q Consensus       143 ---------------~~~~~~~~~-----~~d~Vv~~a~~~----------------------------------~~~~~  168 (401)
                                     ++.++++..     ++|+|||+||..                                  +.++.
T Consensus       113 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~  192 (328)
T 2qhx_A          113 PVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY  192 (328)
T ss_dssp             C-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHH
T ss_pred             cccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHH
Confidence                           666666532     479999999841                                  22333


Q ss_pred             HHHHHH----HhCC------CCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeE
Q 015746          169 PVADWA----KSSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWA  226 (401)
Q Consensus       169 ~ll~aa----~~~g------v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~  226 (401)
                      ++++++    ++.+      ..+||++||...+...            +....|.+.|...+            .|++++
T Consensus       193 ~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn  260 (328)
T 2qhx_A          193 FLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVN  260 (328)
T ss_dssp             HHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            444443    3445      5799999998776432            11245555553322            389999


Q ss_pred             EEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       227 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      +|+||++.++. .. . ......+....++.        ..+.+++|+|++++.++..... ..|+++++.+|..+
T Consensus       261 ~v~PG~v~T~~-~~-~-~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          261 GVGPGLSVLVD-DM-P-PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             EEEESSBSCCC-CS-C-HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEecCcccCCc-cc-c-HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            99999999886 22 2 33334444333321        0245799999999999975433 45799999988543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.60  E-value=9.5e-16  Score=144.39  Aligned_cols=187  Identities=17%  Similarity=0.118  Sum_probs=118.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.+
T Consensus        29 l~gk~vlVT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~   97 (301)
T 3tjr_A           29 FDGRAAVVT----GGASGIGLATATEFARRGARLVLSDVDQPALEQAV-------NGLRGQGFDAHGVVCDVRHLDEMVR   97 (301)
T ss_dssp             STTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHH
Confidence            346899999    99999999999999999999999999876543211       1111  2356777777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~g-v~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+ ..+||++||...+.... 
T Consensus        98 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  176 (301)
T 3tjr_A           98 LADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA-  176 (301)
T ss_dssp             HHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-
Confidence            65532     47999999994                    456666666664    3344 45899999988764321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHH-----HHHcCCCcccC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFD-----RIVRKRPVPIP  259 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~-----~~~~~~~~~~~  259 (401)
                                 ....|.+.|...+            .|+++++|+||.+..+..     .....     ......+...+
T Consensus       177 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~-----~~~~~~~~~~~~~~~~~~~~~  240 (301)
T 3tjr_A          177 -----------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV-----SNSERIRGADYGMSATPEGAF  240 (301)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH-----HHHHHHC--------------
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc-----cccccccchhhccccChhhhc
Confidence                       1245666554322            279999999999976521     11100     01111222233


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPE  286 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~  286 (401)
                      +.......+++++|+|++++.+++++.
T Consensus       241 ~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          241 GPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             --------CCCHHHHHHHHHHHHHHTC
T ss_pred             cccccccCCCCHHHHHHHHHHHHhcCC
Confidence            333344568899999999999998754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.60  E-value=8.3e-15  Score=135.84  Aligned_cols=195  Identities=14%  Similarity=0.120  Sum_probs=129.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++++... ...+       ..++.  ...+.++.+|   .+++.
T Consensus        29 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~Dv~d~~~v~   97 (271)
T 3v2g_A           29 LAGKTAFVT----GGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV-------VSEIEQAGGRAVAIRADNRDAEAIE   97 (271)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-------HHHHHhcCCcEEEEECCCCCHHHHH
Confidence            456899999    999999999999999999999998776522 2111       01111  2356677777   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++++..     ++|++||+||.                    |+.++.++++++...  +..+||++||.......    
T Consensus        98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~----  173 (271)
T 3v2g_A           98 QAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP----  173 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC----
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC----
Confidence            665532     47999999994                    466777778877654  33589999986543211    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                             .+....|.+.|...+            .|+++..|+||.+.++......  ..........+..         
T Consensus       174 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~---------  235 (271)
T 3v2g_A          174 -------WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIATG---------  235 (271)
T ss_dssp             -------STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTTS---------
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCCC---------
Confidence                   012255666664322            2899999999999987543210  1122333333322         


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+.+++|+|++++.++..... ..|+++++.+|.
T Consensus       236 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          236 SYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            245799999999999876543 568999999874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.60  E-value=7.6e-15  Score=136.69  Aligned_cols=195  Identities=13%  Similarity=0.129  Sum_probs=130.6

Q ss_pred             cccCeEEEEecCCCcccc--chHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~--iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~  144 (401)
                      .++++||||    ||+|+  ||++++++|+++|++|++++|+. ..+        ...++  ...++.++.+|   .+++
T Consensus        24 l~~k~vlVT----Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~--------~~~~l~~~~~~~~~~~~Dl~~~~~v   90 (280)
T 3nrc_A           24 LAGKKILIT----GLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKD--------RVEKLCAEFNPAAVLPCDVISDQEI   90 (280)
T ss_dssp             TTTCEEEEC----CCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHH--------HHHHHHGGGCCSEEEECCTTCHHHH
T ss_pred             cCCCEEEEE----CCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHH--------HHHHHHHhcCCceEEEeecCCHHHH
Confidence            346899999    99977  99999999999999999999987 111        11111  11257788888   5666


Q ss_pred             HHhhcCC-----cccEEEeCCCC-------------------------ChhhHHHHHHHHHhC---CCCEEEEecccccc
Q 015746          145 GNVVGGV-----TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIY  191 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy  191 (401)
                      .++++..     ++|+|||+||.                         |+.++.++++++...   +..+||++||...+
T Consensus        91 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~  170 (280)
T 3nrc_A           91 KDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE  170 (280)
T ss_dssp             HHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence            6655442     48999999984                         234455666665442   23589999998876


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCccc
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPI  258 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~  258 (401)
                      ....            ....|.+.|...+            .|+++..|+||.|.++..... ....+........+.. 
T Consensus       171 ~~~~------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~-  237 (280)
T 3nrc_A          171 KAMP------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLK-  237 (280)
T ss_dssp             SCCT------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTC-
T ss_pred             cCCC------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCC-
Confidence            4321            1245665553322            389999999999998743221 1223333343333332 


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       259 ~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                              .+.+++|+|++++.++.+... .+|+++++.+|..
T Consensus       238 --------~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          238 --------KNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             --------SCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             --------CCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence                    245789999999999986543 5689999999864

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.60  E-value=1.9e-15  Score=138.59  Aligned_cols=191  Identities=14%  Similarity=0.101  Sum_probs=123.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---H-hhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---P-AEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~-~~~~~  146 (401)
                      .+|+||||    ||+|+||++++++|+++|++ |++++|+.+. ..+.     .+.... ..++.++.+|   . +++.+
T Consensus         4 ~~k~vlVt----Gas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~-----~l~~~~~~~~~~~~~~D~~~~~~~~~~   73 (254)
T 1sby_A            4 TNKNVIFV----AALGGIGLDTSRELVKRNLKNFVILDRVENP-TALA-----ELKAINPKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHH-----HHHHHCTTSEEEEEECCTTSCHHHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHH-----HHHHhCCCceEEEEEEecCCChHHHHH
Confidence            46899999    99999999999999999997 9999987632 1000     111110 1246677777   4 56666


Q ss_pred             hhcCC-----cccEEEeCCCC------------ChhhHHHHHHHHHhC----C---CCEEEEecccccccCCCCCCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------NLDAVRPVADWAKSS----G---VKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------~~~~~~~ll~aa~~~----g---v~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      +++..     ++|+|||+||.            |+.++.++++++...    +   ..+||++||...+....       
T Consensus        74 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  146 (254)
T 1sby_A           74 LLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-------  146 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-------
T ss_pred             HHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC-------
Confidence            65532     47999999994            566777777776532    1   35799999988875321       


Q ss_pred             CCCCCCCChHHHHHHH-----HH-------hCCCeEEEecCeeecCCCCC--CcH--HHHHHHHHcCCCcccCCCCccee
Q 015746          203 DVVKPDAGHVQVEKYI-----SE-------NFSNWASFRPQYMIGSGNNK--DCE--EWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~-----~e-------~g~~~~ilRp~~v~G~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                           ....|...|..     +.       .|+++++|+||.+.++....  ...  ...+......            .
T Consensus       147 -----~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------------~  209 (254)
T 1sby_A          147 -----QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS------------H  209 (254)
T ss_dssp             -----TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT------------S
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc------------C
Confidence                 12345544432     22       48999999999998862110  000  0001111111            1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      .+.+++|+|++++.+++..  ..|++|++.+|.
T Consensus       210 ~~~~~~dvA~~i~~~~~~~--~~G~~~~v~gG~  240 (254)
T 1sby_A          210 PTQTSEQCGQNFVKAIEAN--KNGAIWKLDLGT  240 (254)
T ss_dssp             CCEEHHHHHHHHHHHHHHC--CTTCEEEEETTE
T ss_pred             CCCCHHHHHHHHHHHHHcC--CCCCEEEEeCCc
Confidence            2348999999999998743  337999999873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.60  E-value=5e-15  Score=135.78  Aligned_cols=182  Identities=12%  Similarity=0.043  Sum_probs=111.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ..++.++.+|   .+++.+
T Consensus         5 ~~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   73 (252)
T 3h7a_A            5 PRNATVAVI----GAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-------AEIEAAGGRIVARSLDARNEDEVTA   73 (252)
T ss_dssp             CCSCEEEEE----CCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-------HHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEECcCCCHHHHHH
Confidence            346899999    99999999999999999999999999886554321       1111  2356777777   666666


Q ss_pred             hhcCC----cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCCCC
Q 015746          147 VVGGV----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       147 ~~~~~----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +++..    ++|++||+||.                    |+.++.+++++    +++.+..+||++||...+....   
T Consensus        74 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  150 (252)
T 3h7a_A           74 FLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGS---  150 (252)
T ss_dssp             HHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCT---
T ss_pred             HHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCC---
Confidence            66532    58999999994                    34455454444    4555666999999987654321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCe-EEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNW-ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~-~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               ....|.+.|...+            .|+++ .+++||.+..+.....     ....     ..........
T Consensus       151 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-----~~~~-----~~~~~~~~~~  211 (252)
T 3h7a_A          151 ---------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-----REQM-----FGKDALANPD  211 (252)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-----chhh-----hhhhhhcCCc
Confidence                     1255666653322            37888 8999999877632211     0000     0011111122


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      . +.+++|+|++++.++.++..
T Consensus       212 ~-~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          212 L-LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             ---CCHHHHHHHHHHHHHCCGG
T ss_pred             c-CCCHHHHHHHHHHHHhCchh
Confidence            3 78999999999999997765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.60  E-value=3.2e-15  Score=139.09  Aligned_cols=185  Identities=16%  Similarity=0.156  Sum_probs=119.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc----CCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS----AGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~D---~~~~  144 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++..    ..+.++.+|   ++++
T Consensus        30 l~~k~vlVT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~~~~~v   98 (279)
T 1xg5_A           30 WRDRLALVT----GASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-------AECKSAGYPGTLIPYRCDLSNEEDI   98 (279)
T ss_dssp             GTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-------HHHHhcCCCceEEEEEecCCCHHHH
Confidence            456899999    99999999999999999999999999865432211       11111    235667777   5666


Q ss_pred             HHhhcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCC--CEEEEecccccccC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGV--KQFLFISSAGIYKP  193 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv--~~~v~~SS~~vy~~  193 (401)
                      .++++..     ++|+|||+||.                    |+.+    ++++++.+++.+.  ++||++||...+..
T Consensus        99 ~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  178 (279)
T 1xg5_A           99 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  178 (279)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc
Confidence            6666521     47999999984                    2333    7788888888875  79999999887642


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHH---------H-----HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYI---------S-----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~---------~-----e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  259 (401)
                      ...          +....|...|..         .     ..++++++|+||.+.++..         .......+....
T Consensus       179 ~~~----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~---------~~~~~~~~~~~~  239 (279)
T 1xg5_A          179 LPL----------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA---------FKLHDKDPEKAA  239 (279)
T ss_dssp             CSC----------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH---------HHHTTTCHHHHH
T ss_pred             CCC----------CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh---------hhhcccChhHHh
Confidence            110          111345544432         1     2378999999999987621         111111000000


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      . ......+++++|+|++++.++..+..
T Consensus       240 ~-~~~~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          240 A-TYEQMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             H-HHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             h-hcccccCCCHHHHHHHHHHHhcCCcc
Confidence            0 00112367899999999999987665

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.59  E-value=2.5e-15  Score=139.71  Aligned_cols=197  Identities=14%  Similarity=0.163  Sum_probs=128.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.. ....+.++.+|   .+++.+++
T Consensus        31 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dv~~~~~~~~~~  101 (275)
T 4imr_A           31 LRGRTALVT----GSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQ----RIIA-SGGTAQELAGDLSEAGAGTDLI  101 (275)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHH----HHHH-TTCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----HHHh-cCCeEEEEEecCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998765543211    0000 12356677777   44555554


Q ss_pred             cC----CcccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          149 GG----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~----~~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +.    -++|++||+||.                    |+.++.++++++    ++.+..+||++||...+...      
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------  175 (275)
T 4imr_A          102 ERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK------  175 (275)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC------
Confidence            42    247999999994                    455556666655    45566799999998876522      


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc--HHHHHHHHHcCC-CcccCCCCcce
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKR-PVPIPGSGMQF  265 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~  265 (401)
                            +....|.+.|...+            .|+++..|+||.+..+......  .......+.... ++.        
T Consensus       176 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~--------  241 (275)
T 4imr_A          176 ------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMG--------  241 (275)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTC--------
T ss_pred             ------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccC--------
Confidence                  11134665553322            2899999999999775211000  001111222211 221        


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                       .+..++|+|++++.++.+... .+|+++++.+|
T Consensus       242 -r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          242 -RAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             -SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             -CCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence             234789999999999987643 56899999886

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.59  E-value=2.6e-15  Score=137.81  Aligned_cols=193  Identities=13%  Similarity=0.078  Sum_probs=127.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      +|++|||    ||+|+||++++++|+++|  +.|++++|+.+....+.        +.....+.++.+|   .+++.+++
T Consensus         2 gk~~lVT----Gas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~   69 (254)
T 3kzv_A            2 GKVILVT----GVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK--------EKYGDRFFYVVGDITEDSVLKQLV   69 (254)
T ss_dssp             CCEEEEC----STTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH--------HHHGGGEEEEESCTTSHHHHHHHH
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH--------HHhCCceEEEECCCCCHHHHHHHH
Confidence            5789999    999999999999999985  78888888875443211        1112356777777   56666665


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||+||.                     |+.++.++++++    ++.+ .++|++||...+...    
T Consensus        70 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~----  144 (254)
T 3kzv_A           70 NAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF----  144 (254)
T ss_dssp             HHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS----
T ss_pred             HHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC----
Confidence            532     57999999994                     355666666665    5555 689999998766432    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH----------hCCCeEEEecCeeecCCCCCC--------cHHHHHHHHHcCCCcccCC
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e----------~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~  260 (401)
                              +....|.+.|...+          .++++..|+||.+.++.....        ........+....+.    
T Consensus       145 --------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  212 (254)
T 3kzv_A          145 --------SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN----  212 (254)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT----
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc----
Confidence                    11245665553322          289999999999988743211        012222233222222    


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCC--CcCCCcEEEecCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENP--EAASSNIFNLVSDRA  300 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~--~~~~g~~~~~~~~~~  300 (401)
                           ..+.+++|+|++++.++.+.  ...+|+++++.+++.
T Consensus       213 -----~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          213 -----NQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             -----C----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             -----CCcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence                 23568899999999998876  335689999988753

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.59  E-value=5e-15  Score=136.99  Aligned_cols=197  Identities=16%  Similarity=0.170  Sum_probs=125.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++|||    ||+|+||++++++|+++|++|++..+.... ...+..    .+.. ....+.++.+|   .+++.+++
T Consensus        26 ~~k~~lVT----Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~v~~~~   96 (267)
T 3u5t_A           26 TNKVAIVT----GASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAG----KIEA-AGGKALTAQADVSDPAAVRRLF   96 (267)
T ss_dssp             -CCEEEEE----SCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHH----HHHH-TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHh-cCCeEEEEEcCCCCHHHHHHHH
Confidence            35789999    999999999999999999999988654432 211100    0000 11356667777   56666665


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +..     ++|++||+||.                    |+.++.++++++...  .-.++|++||...+....      
T Consensus        97 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  170 (267)
T 3u5t_A           97 ATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------  170 (267)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC------
Confidence            532     48999999994                    566777777766543  124899999987664321      


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            ....|.+.|...+            .|+++..|+||.+..+.............+....+.         ..+.
T Consensus       171 ------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~---------~r~~  235 (267)
T 3u5t_A          171 ------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPL---------ERLG  235 (267)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTT---------CSCB
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCC---------CCCc
Confidence                  1245665553332            279999999999987642211111112223332222         3356


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .++|+|++++.++..... .+|+++++.+|.
T Consensus       236 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          236 TPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             CHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             CHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            899999999999986654 568999998873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.59  E-value=5.3e-15  Score=137.76  Aligned_cols=197  Identities=14%  Similarity=0.146  Sum_probs=131.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ...+.++.+|   .+++.+++
T Consensus        28 l~~k~vlVT----Gas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~v~~~~   95 (281)
T 3ppi_A           28 FEGASAIVS----GGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA-------DEL-GNRAEFVSTNVTSEDSVLAAI   95 (281)
T ss_dssp             GTTEEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHH
Confidence            446789999    99999999999999999999999999875543211       111 2357778887   55555555


Q ss_pred             cC---C-cccEEEeC-CCC-------------------------ChhhHHHHHHHHH----h------CCCCEEEEeccc
Q 015746          149 GG---V-TFDVVLDN-NGK-------------------------NLDAVRPVADWAK----S------SGVKQFLFISSA  188 (401)
Q Consensus       149 ~~---~-~~d~Vv~~-a~~-------------------------~~~~~~~ll~aa~----~------~gv~~~v~~SS~  188 (401)
                      +.   . ++|++||+ ++.                         |+.++.++++++.    +      .+..+||++||.
T Consensus        96 ~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           96 EAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             HHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             HHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            42   1 58999999 442                         3445556666553    2      233589999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCc
Q 015746          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV  256 (401)
Q Consensus       189 ~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~  256 (401)
                      ..+....            ....|.+.|...+            .|++++.|+||.|..+.... ........+....+.
T Consensus       176 ~~~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~  242 (281)
T 3ppi_A          176 AGYEGQI------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF  242 (281)
T ss_dssp             GGTSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS
T ss_pred             cccCCCC------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC
Confidence            8764321            1255666664322            37999999999997652111 112223333333332


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t  302 (401)
                      .        ..+.+++|+|++++.++++. ..+|+++++.+|..++
T Consensus       243 ~--------~~~~~pedvA~~v~~l~s~~-~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          243 P--------KRLGTPDEFADAAAFLLTNG-YINGEVMRLDGAQRFT  279 (281)
T ss_dssp             S--------SSCBCHHHHHHHHHHHHHCS-SCCSCEEEESTTCCCC
T ss_pred             C--------CCCCCHHHHHHHHHHHHcCC-CcCCcEEEECCCcccC
Confidence            1        23568999999999999863 4557999999987654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.59  E-value=3.6e-15  Score=137.55  Aligned_cols=208  Identities=14%  Similarity=0.090  Sum_probs=129.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|...+.+.+..    ...++.  ...+.++.+|   .+++.+
T Consensus         9 l~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~d~~~v~~   80 (262)
T 3ksu_A            9 LKNKVIVIA----GGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANK----LKDELEDQGAKVALYQSDLSNEEEVAK   80 (262)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHH----HHHHHHTTTCEEEEEECCCCSHHHHHH
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHH----HHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            346899999    999999999999999999999999876533221100    001111  1245667777   666666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +++..     ++|++||+||.                    |+.++.++++++...  +..++|++||...+.....   
T Consensus        81 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~---  157 (262)
T 3ksu_A           81 LFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF---  157 (262)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC---
Confidence            66532     48999999993                    567778888888764  3458999999876643211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          ...+..+|.+.+.+.+.       .|+++..|+||.+..+..         ....................+.+++
T Consensus       158 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~---------~~~~~~~~~~~~~~~~~~~r~~~pe  224 (262)
T 3ksu_A          158 ----YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF---------YGQETKESTAFHKSQAMGNQLTKIE  224 (262)
T ss_dssp             ----CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH---------HTCC------------CCCCSCCGG
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc---------cccCchHHHHHHHhcCcccCCCCHH
Confidence                11133466665544433       279999999999865411         0000000001111111223456899


Q ss_pred             HHHHHHHHHhcCCCcCCCcEEEecCCCCCCH
Q 015746          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL  303 (401)
Q Consensus       273 D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~  303 (401)
                      |+|++++.++.+....+|+++++.||.....
T Consensus       225 dvA~~v~~L~s~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          225 DIAPIIKFLTTDGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             GTHHHHHHHHTTTTTCCSCEEEESTTCCCC-
T ss_pred             HHHHHHHHHcCCCCCccCCEEEECCCccCCC
Confidence            9999999999874346689999999865443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.59  E-value=7.1e-15  Score=135.51  Aligned_cols=195  Identities=13%  Similarity=0.170  Sum_probs=124.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++.  ..++.++.+|   .+++.+
T Consensus         5 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   73 (262)
T 1zem_A            5 FNGKVCLVT----GAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-------ASVREKGVEARSYVCDVTSEEAVIG   73 (262)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTTSCEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEecCCCHHHHHH
Confidence            346899999    99999999999999999999999999875433211       1111  1246667777   555555


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||+||.                     |+.++.++++++.    +.+..+||++||...+.... 
T Consensus        74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  152 (262)
T 1zem_A           74 TVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP-  152 (262)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT-
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-
Confidence            55432     47999999984                     3444555555543    34567999999987764321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCC------------c--HHH-HHHH
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKD------------C--EEW-FFDR  249 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~------------~--~~~-~~~~  249 (401)
                                 ....|...|...            ..|+++++|+||.+..+.....            .  ... +...
T Consensus       153 -----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (262)
T 1zem_A          153 -----------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQ  221 (262)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHH
Confidence                       124566555322            1389999999999866521000            0  001 1111


Q ss_pred             HHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      +....|+         ..+..++|+|++++.++..... .+|+++++.+|
T Consensus       222 ~~~~~p~---------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          222 MIGSVPM---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHTSTT---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHhcCCC---------CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            2222221         1245889999999999876543 45799988765

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.58  E-value=2.1e-15  Score=143.21  Aligned_cols=193  Identities=15%  Similarity=0.098  Sum_probs=116.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.... ...+.++.+|   .+++.++
T Consensus         6 l~~k~vlVT----Gas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dl~~~~~v~~~   77 (319)
T 3ioy_A            6 FAGRTAFVT----GGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALA----TLEAEGSGPEVMGVQLDVASREGFKMA   77 (319)
T ss_dssp             CTTCEEEEE----TTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCGGGEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEc----CCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhcCCCCeEEEEECCCCCHHHHHHH
Confidence            346799999    999999999999999999999999998765432211    000000 1146677777   5666666


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----------CCCEEEEeccccccc
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----------GVKQFLFISSAGIYK  192 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----------gv~~~v~~SS~~vy~  192 (401)
                      ++..     ++|+|||+||.                    |+.++.++++++...          +..+||++||...+.
T Consensus        78 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~  157 (319)
T 3ioy_A           78 ADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL  157 (319)
T ss_dssp             HHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc
Confidence            6532     58999999994                    456666666655432          245799999988765


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcC---CCc
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRK---RPV  256 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~---~~~  256 (401)
                      ...            ....|.+.|..         .|   .|+++++|+||.|.++..... .....+......   ..+
T Consensus       158 ~~~------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
T 3ioy_A          158 AAG------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAV  225 (319)
T ss_dssp             CCS------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--------------------------
T ss_pred             CCC------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHH
Confidence            421            12456666652         12   389999999999988643211 000111000000   000


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPE  286 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~  286 (401)
                      .....  .....++++|+|+.++.+++++.
T Consensus       226 ~~~~~--~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          226 ERLAG--VHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             ---CC--GGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHH--hhhcCCCHHHHHHHHHHHHHcCC
Confidence            00110  11112799999999999999854

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.58  E-value=5.2e-15  Score=138.33  Aligned_cols=196  Identities=16%  Similarity=0.188  Sum_probs=130.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~  144 (401)
                      ..+|+||||    ||+|+||++++++|+++|+   +|++++|+.+....+..    .+... ....+.++.+|   .+++
T Consensus        31 l~~k~~lVT----Gas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dv~d~~~v  102 (287)
T 3rku_A           31 LAKKTVLIT----GASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKK----TIDQEFPNAKVHVAQLDITQAEKI  102 (287)
T ss_dssp             HTTCEEEEE----STTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----HHHHHCTTCEEEEEECCTTCGGGH
T ss_pred             cCCCEEEEe----cCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHH----HHHhhCCCCeEEEEECCCCCHHHH
Confidence            457899999    9999999999999999998   99999998765432211    00000 02245667777   7777


Q ss_pred             HHhhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~  194 (401)
                      .++++..     ++|+|||+||.                     |+.++.++++++    ++.+..+||++||...+...
T Consensus       103 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~  182 (287)
T 3rku_A          103 KPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY  182 (287)
T ss_dssp             HHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC
Confidence            7777654     58999999993                     355666666655    55566799999998765432


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCC---CCcHHHHHHHHHcCCCcccC
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~  259 (401)
                      .            ....|.+.|...+            .|++++.|+||.|..+...   ...... .......      
T Consensus       183 ~------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~------  243 (287)
T 3rku_A          183 P------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQ-AKNVYKD------  243 (287)
T ss_dssp             T------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHH-HHHHHTT------
T ss_pred             C------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHH-HHHhhcc------
Confidence            1            1245666553322            3899999999999876210   000000 1111111      


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                            ..++.++|+|++++.++.++.. ..|+++++.+++.
T Consensus       244 ------~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          244 ------TTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             ------SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             ------cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence                  1234899999999999987765 4468898888764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.58  E-value=4.1e-14  Score=128.71  Aligned_cols=186  Identities=17%  Similarity=0.226  Sum_probs=126.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||++.||+.++++|+++|++|++.+|+.+....+.+.         ..++..+.+|   ++++.++++
T Consensus         1 MnK~vlVT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~v~   67 (247)
T 3ged_A            1 MNRGVIVT----GGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPLTLKKFVE   67 (247)
T ss_dssp             -CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHHHHHHHHH
Confidence            35889999    9999999999999999999999999987654432221         1255667777   555555544


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|++||+||.                    |+.++    +.++..+++.+ .++|++||...+...      
T Consensus        68 ~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~------  140 (247)
T 3ged_A           68 YAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE------  140 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC------
Confidence            32     48999999994                    34443    44444555555 589999998765432      


Q ss_pred             CCCCCCCCCChHHHHHHH---------HHh--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          201 EGDVVKPDAGHVQVEKYI---------SEN--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~---------~e~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            +....|.+.|..         .|.  ++++..|.||.+-.+....     +.+......|+..+         .
T Consensus       141 ------~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-----~~~~~~~~~Pl~R~---------g  200 (247)
T 3ged_A          141 ------PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE-----FTQEDCAAIPAGKV---------G  200 (247)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTSTTSSC---------B
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH-----HHHHHHhcCCCCCC---------c
Confidence                  112566666633         222  7899999999987654322     23344444444333         3


Q ss_pred             eHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      .++|+|.+++.++.. ....|+++.+.||.
T Consensus       201 ~pediA~~v~fL~s~-~~iTG~~i~VDGG~  229 (247)
T 3ged_A          201 TPKDISNMVLFLCQQ-DFITGETIIVDGGM  229 (247)
T ss_dssp             CHHHHHHHHHHHHHC-SSCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHHhC-CCCCCCeEEECcCH
Confidence            689999999999974 45668999999884

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.58  E-value=8.5e-15  Score=138.90  Aligned_cols=210  Identities=13%  Similarity=0.087  Sum_probs=129.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCC-CCCCccc----ch--hcCCCeEEEcC---H
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-PPFNRFN----EI--VSAGGKTVWGD---P  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~-~~~~~~~----~l--~~~~~~~~~~D---~  141 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+......... .....+.    .+  ....+.++.+|   .
T Consensus        44 l~gk~~lVT----Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           44 LQGKVAFIT----GAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             TTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            456899999    999999999999999999999999887432110000 0000111    11  12356677777   5


Q ss_pred             hhHHHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CCEEEEecccccc
Q 015746          142 AEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIY  191 (401)
Q Consensus       142 ~~~~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~g-v~~~v~~SS~~vy  191 (401)
                      +++.++++..     ++|+|||+||.                    |+.++.++++++    ++.+ -.+||++||...+
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            6666666532     47999999994                    455565666555    3343 3589999998876


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC--CC--
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK--RP--  255 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~--~~--  255 (401)
                      ....            ....|.+.|...+            .|++++.|+||.|+++.....   .+...+...  .+  
T Consensus       200 ~~~~------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~  264 (317)
T 3oec_A          200 RGAP------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTR  264 (317)
T ss_dssp             SCCT------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCH
T ss_pred             CCCC------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccch
Confidence            4321            1245666553322            389999999999987632110   001111100  00  


Q ss_pred             ---cccC-CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          256 ---VPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       256 ---~~~~-~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                         ...+ ........+++++|+|++++.++.+... .+|+++++.+|..
T Consensus       265 ~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          265 EDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             HHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence               0000 0011114578999999999999876543 5689999998853

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.58  E-value=1.5e-14  Score=131.00  Aligned_cols=189  Identities=16%  Similarity=0.112  Sum_probs=124.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.......+.++.+|   .+++.++++.
T Consensus         2 ~k~vlIT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   73 (235)
T 3l77_A            2 MKVAVIT----GASRGIGEAIARALARDGYALALGARSVDRLEKIAH----ELMQEQGVEVFYHHLDVSKAESVEEFSKK   73 (235)
T ss_dssp             CCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHCC-
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhcCCeEEEEEeccCCHHHHHHHHHH
Confidence            6789999    999999999999999999999999998754432110    0111112466777777   6777777764


Q ss_pred             C-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      .     ++|++||+||.                    |+.++.++++++...   +..++|++||...+...        
T Consensus        74 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~--------  145 (235)
T 3l77_A           74 VLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI--------  145 (235)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC--------
T ss_pred             HHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC--------
Confidence            3     58999999994                    456666666665432   22467777765544221        


Q ss_pred             CCCCCCCChHHHHHHHHH----------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          203 DVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e----------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                          +....|...|...+          .+++++.++||.+..+.....                 .. ......++.++
T Consensus       146 ----~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~-----------------~~-~~~~~~~~~p~  203 (235)
T 3l77_A          146 ----PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK-----------------PG-KPKEKGYLKPD  203 (235)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC-----------------SC-CCGGGTCBCHH
T ss_pred             ----CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc-----------------CC-cccccCCCCHH
Confidence                11244555553322          389999999999876532110                 00 01112467899


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      |+|++++.+++++.. ..|+++...+++.
T Consensus       204 dva~~v~~l~~~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          204 EIAEAVRCLLKLPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             HHHHHHHHHHTSCTTCCCCEEEECCTTSC
T ss_pred             HHHHHHHHHHcCCCCCccceEEEeecccC
Confidence            999999999998876 3457777666553

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.58  E-value=1.9e-14  Score=133.45  Aligned_cols=191  Identities=14%  Similarity=0.123  Sum_probs=121.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~~~~  150 (401)
                      |+||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.. .++.++.+|   .+++.++++.
T Consensus        22 k~vlVT----Gas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   90 (272)
T 2nwq_A           22 STLFIT----GATSGFGEACARRFAEAGWSLVLTGRREERLQALA-------GELSAKTRVLPLTLDVRDRAAMSAAVDN   90 (272)
T ss_dssp             CEEEES----STTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHTTTSCEEEEECCTTCHHHHHHHHHT
T ss_pred             cEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHhhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            789999    99999999999999999999999999875433211       11110 256677777   6777777766


Q ss_pred             C-----cccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCC-EEEEecccccccCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVK-QFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~~~~  199 (401)
                      .     ++|+|||+||.                     |+.+    ++.++..+++.+.. +||++||...+....    
T Consensus        91 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~----  166 (272)
T 2nwq_A           91 LPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYP----  166 (272)
T ss_dssp             CCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCT----
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCC----
Confidence            4     47999999984                     2234    33445555566666 999999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|...|...+            .|+++++|+||.+.++.....     +..- .........    ...
T Consensus       167 --------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-----~~~~-~~~~~~~~~----~~~  228 (272)
T 2nwq_A          167 --------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR-----FGGD-QARYDKTYA----GAH  228 (272)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCC
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc-----cccc-hHHHHHhhc----cCC
Confidence                    1245665553322            278999999999987642110     0000 000000000    012


Q ss_pred             eeeHHHHHHHHHHHhcCCCcCCCcEEEecCC
Q 015746          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~  298 (401)
                      ++.++|+|++++.++.++....|+.+.+.++
T Consensus       229 ~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          229 PIQPEDIAETIFWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             CBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             CCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence            4689999999999998766555677777654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.57  E-value=2.2e-14  Score=134.95  Aligned_cols=208  Identities=16%  Similarity=0.092  Sum_probs=129.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc-CCCCCCCcc----cchh--cCCCeEEEcC---H
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRF----NEIV--SAGGKTVWGD---P  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~~~~----~~l~--~~~~~~~~~D---~  141 (401)
                      ..++++|||    ||+|+||++++++|+++|++|++++|+...... +.......+    .++.  ...+.++.+|   .
T Consensus        26 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           26 VEGKVAFIT----GAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF  101 (299)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence            456899999    999999999999999999999999987532110 000000000    1111  2356777777   5


Q ss_pred             hhHHHhhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHH----hCC-CCEEEEeccccc
Q 015746          142 AEVGNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGI  190 (401)
Q Consensus       142 ~~~~~~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~----~~g-v~~~v~~SS~~v  190 (401)
                      +++.++++..     ++|++||+||.                     |+.++.++++++.    +.+ ..+||++||...
T Consensus       102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~  181 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG  181 (299)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh
Confidence            5666655431     47999999993                     3555556666543    333 468999999887


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC----C
Q 015746          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK----R  254 (401)
Q Consensus       191 y~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~----~  254 (401)
                      +....            ....|.+.|...+            .|+++..|+||.|.++.......    ......    .
T Consensus       182 ~~~~~------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~  245 (299)
T 3t7c_A          182 LRGAE------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPT----YRMFRPDLENP  245 (299)
T ss_dssp             TSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHH----HHHHCTTSSSC
T ss_pred             ccCCC------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccch----hhhhhhhhccc
Confidence            64321            1245666663322            28999999999999875432100    000000    0


Q ss_pred             Cccc------CCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          255 PVPI------PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       255 ~~~~------~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ....      ...... ..+..++|+|++++.++.+... ..|+++++.+|..
T Consensus       246 ~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          246 TVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             CHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            0000      000001 2366899999999999986643 5689999998864

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.57  E-value=1.9e-14  Score=132.81  Aligned_cols=201  Identities=13%  Similarity=0.107  Sum_probs=131.3

Q ss_pred             cccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~  145 (401)
                      ..+++||||    ||+  |+||++++++|+++|++|++++|+.... ....    ..+.......+.++.+|   .+++.
T Consensus        18 l~~k~vlIT----Gas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dl~~~~~v~   89 (267)
T 3gdg_A           18 LKGKVVVVT----GASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV----KELEKTYGIKAKAYKCQVDSYESCE   89 (267)
T ss_dssp             CTTCEEEET----TCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHH----HHHHHHHCCCEECCBCCTTCHHHHH
T ss_pred             cCCCEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHH----HHHHHhcCCceeEEecCCCCHHHHH
Confidence            456899999    999  9999999999999999999999887543 1100    01111112355666666   66666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....
T Consensus        90 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  169 (267)
T 3gdg_A           90 KLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP  169 (267)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC
Confidence            655443     57999999994                    455566666655    5556679999999776533210


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH---------h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE---------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e---------~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                +....|.+.|...+         +  .+++..+.||.+..+.... ........+....+.         
T Consensus       170 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------  229 (267)
T 3gdg_A          170 ----------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF-VPKETQQLWHSMIPM---------  229 (267)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG-SCHHHHHHHHTTSTT---------
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh-CCHHHHHHHHhcCCC---------
Confidence                      11245666664333         2  3688899999998764321 112223333333322         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ..+.+++|+|++++.++.+... .+|+++++.+|..
T Consensus       230 ~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          230 GRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             SSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            3456899999999999986543 5689999998753

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.57  E-value=3.3e-14  Score=131.18  Aligned_cols=182  Identities=13%  Similarity=0.106  Sum_probs=123.3

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCC---CeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---Hh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PA  142 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~  142 (401)
                      ..++++||||    ||+|+||++++++|+++|   ++|++++|+.++...+        .++.  ..++.++.+|   .+
T Consensus        18 ~~~~k~vlIT----GasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~--------~~l~~~~~~~~~~~~Dl~~~~   85 (267)
T 1sny_A           18 GSHMNSILIT----GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL--------EDLAKNHSNIHILEIDLRNFD   85 (267)
T ss_dssp             --CCSEEEES----CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH--------HHHHHHCTTEEEEECCTTCGG
T ss_pred             CCCCCEEEEE----CCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH--------HHhhccCCceEEEEecCCChH
Confidence            3457899999    999999999999999999   9999999987654321        1111  2357777787   56


Q ss_pred             hHHHhhcCC-------cccEEEeCCCC---------------------ChhhHHHHHHHHHhC----------C-----C
Q 015746          143 EVGNVVGGV-------TFDVVLDNNGK---------------------NLDAVRPVADWAKSS----------G-----V  179 (401)
Q Consensus       143 ~~~~~~~~~-------~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~----------g-----v  179 (401)
                      ++.++++..       ++|+|||+||.                     |+.++.++++++...          +     .
T Consensus        86 ~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~  165 (267)
T 1sny_A           86 AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGR  165 (267)
T ss_dssp             GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTT
T ss_pred             HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCC
Confidence            666666522       47999999983                     345566666665432          2     4


Q ss_pred             CEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHH
Q 015746          180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFF  247 (401)
Q Consensus       180 ~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~  247 (401)
                      .+||++||...+.....         .+....|+..|...         +   .++++++||||++..+....       
T Consensus       166 ~~iv~isS~~~~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------  229 (267)
T 1sny_A          166 AAIINMSSILGSIQGNT---------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------  229 (267)
T ss_dssp             CEEEEECCGGGCSTTCC---------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------
T ss_pred             ceEEEEecccccccCCC---------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------
Confidence            68999999887654310         01123455544332         2   38999999999987653211       


Q ss_pred             HHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                                        ..++.++|+|+.++.++..... .+|+.+++.++
T Consensus       230 ------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          230 ------------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             ------------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             ------------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCc
Confidence                              0235789999999999986544 45677776554

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.57  E-value=1.6e-14  Score=130.93  Aligned_cols=178  Identities=13%  Similarity=0.135  Sum_probs=118.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.++...               ...++.+|   .+++.++++
T Consensus         2 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~D~~~~~~~~~~~~   62 (236)
T 1ooe_A            2 SSGKVIVY----GGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---------------SNILVDGNKNWTEQEQSILE   62 (236)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---------------EEEECCTTSCHHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEecCcccccc---------------ccEEEeCCCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998754321               12344455   555655554


Q ss_pred             C-------CcccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCC
Q 015746          150 G-------VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~-------~~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      .       -++|+|||+||.                     |+.++.++++++...  ...+||++||...+...     
T Consensus        63 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----  137 (236)
T 1ooe_A           63 QTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-----  137 (236)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----
T ss_pred             HHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC-----
Confidence            2       258999999983                     344556667766553  12489999998876432     


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H-----hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e-----~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                             +....|...|...         |     .|+++++|+||.+.++.         ........         ..
T Consensus       138 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~~---------~~  192 (236)
T 1ooe_A          138 -------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPNA---------DH  192 (236)
T ss_dssp             -------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTTC---------CG
T ss_pred             -------CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---------hhhcCCCc---------cc
Confidence                   1124455555322         2     24889999999987751         12221111         11


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC--cCCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~--~~~g~~~~~~~~~  299 (401)
                      ..++.++|+|++++.++..+.  ..+|+.+++.++.
T Consensus       193 ~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          193 SSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             GGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             cccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            235678999999987774332  2457999988765

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.57  E-value=6.8e-14  Score=130.60  Aligned_cols=210  Identities=14%  Similarity=0.101  Sum_probs=130.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC-----CCccc----ch--hcCCCeEEEcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----FNRFN----EI--VSAGGKTVWGD  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~----~l--~~~~~~~~~~D  140 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+.........     ...+.    .+  ....+.++.+|
T Consensus         9 l~~k~~lVT----Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A            9 VEGKVAFVT----GAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            346899999    99999999999999999999999999753322111000     00111    11  12356777777


Q ss_pred             ---HhhHHHhhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHHH----hCC-CCEEEEec
Q 015746          141 ---PAEVGNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAK----SSG-VKQFLFIS  186 (401)
Q Consensus       141 ---~~~~~~~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~----~~g-v~~~v~~S  186 (401)
                         .+++.++++..     ++|++||+||.                     |+.++.++++++.    +.+ ..+||++|
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence               56666665432     47999999994                     3455555555543    333 35899999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC-
Q 015746          187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-  253 (401)
Q Consensus       187 S~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-  253 (401)
                      |...+....            ....|.+.|...+            .|+++..|+||.+..+......  . ....... 
T Consensus       165 S~~~~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~-~~~~~~~~  229 (286)
T 3uve_A          165 SVGGLKAYP------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEG--T-FKMFRPDL  229 (286)
T ss_dssp             CGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHH--H-HHHHCTTS
T ss_pred             chhhccCCC------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccc--h-hhhccccc
Confidence            988764321            1245666653322            3899999999999987543210  0 0111000 


Q ss_pred             --CCc----c--cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          254 --RPV----P--IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       254 --~~~----~--~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                        ...    .  ....... ..+.+++|+|++++.++.+... ..|+++++.+|..+
T Consensus       230 ~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          230 ENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence              000    0  0111111 3567999999999999976543 56899999988543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.57  E-value=4.5e-14  Score=128.46  Aligned_cols=178  Identities=11%  Similarity=0.096  Sum_probs=121.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....               ...++.+|   .+++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~D~~~~~~v~~~~~   66 (241)
T 1dhr_A            6 EARRVLVY----GGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------------ASVIVKMTDSFTEQADQVTA   66 (241)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---------------EEEECCCCSCHHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---------------CcEEEEcCCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998754321               12334455   566666655


Q ss_pred             C-------CcccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCC
Q 015746          150 G-------VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~-------~~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      .       -++|+|||+||.                     |+.++.++++++...  .-.+||++||...+....    
T Consensus        67 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  142 (241)
T 1dhr_A           67 EVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----  142 (241)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----
T ss_pred             HHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC----
Confidence            2       258999999983                     344566677766543  124899999988764321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH--------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e--------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                              ....|...|...+              .|+++++|+||.+..+         +........         ..
T Consensus       143 --------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~---------~~~~~~~~~---------~~  196 (241)
T 1dhr_A          143 --------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEA---------DF  196 (241)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTS---------CG
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc---------cccccCcch---------hh
Confidence                    1245555553322              3588999999998664         112211111         11


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..++..+|+|++++.++..... ..|+.+++.+++
T Consensus       197 ~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          197 SSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             ccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            2356789999999999976543 457999988765

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.56  E-value=1.7e-14  Score=135.10  Aligned_cols=196  Identities=12%  Similarity=0.088  Sum_probs=128.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcccchh---cCCCeEEEcC---Hh--
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV---SAGGKTVWGD---PA--  142 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D---~~--  142 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++++ |+.+....+.       .++.   ...+.++.+|   .+  
T Consensus         7 l~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~Dl~~~~~~   75 (291)
T 1e7w_A            7 PTVPVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-------ATLNARRPNSAITVQADLSNVATA   75 (291)
T ss_dssp             -CCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHHSTTCEEEEECCCSSSCBC
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHHhhhcCCeeEEEEeecCCcccc
Confidence            346789999    9999999999999999999999999 8764432211       1111   2346667776   55  


Q ss_pred             ---------------hHHHhhcCC-----cccEEEeCCCCC----------------------------------hhhHH
Q 015746          143 ---------------EVGNVVGGV-----TFDVVLDNNGKN----------------------------------LDAVR  168 (401)
Q Consensus       143 ---------------~~~~~~~~~-----~~d~Vv~~a~~~----------------------------------~~~~~  168 (401)
                                     ++.++++..     ++|++||+||..                                  +.++.
T Consensus        76 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  155 (291)
T 1e7w_A           76 PVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY  155 (291)
T ss_dssp             CCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHH
T ss_pred             cccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHH
Confidence                           666666532     479999999841                                  22233


Q ss_pred             HHHHHH----HhCC------CCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeE
Q 015746          169 PVADWA----KSSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWA  226 (401)
Q Consensus       169 ~ll~aa----~~~g------v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~  226 (401)
                      ++++++    ++.+      ..+||++||...+...            +....|.+.|...+            .|++++
T Consensus       156 ~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  223 (291)
T 1e7w_A          156 FLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVN  223 (291)
T ss_dssp             HHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence            444443    3445      5799999998876432            11245665553322            389999


Q ss_pred             EEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       227 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .|+||.+..+. .  ....+...+....++.        ..+..++|+|++++.++..... ..|+++++.+|..+
T Consensus       224 ~v~PG~v~T~~-~--~~~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          224 GVGPGLSVLVD-D--MPPAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             EEEESSBCCGG-G--SCHHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEeeCCccCCc-c--CCHHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            99999997764 2  1122333333333321        0245799999999999976443 56799999988543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.56  E-value=1.5e-14  Score=130.61  Aligned_cols=180  Identities=16%  Similarity=0.106  Sum_probs=116.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.++...+..       ++ ...+.++.+|   .+++.++++.
T Consensus         1 Mk~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~v~~~~~~   68 (230)
T 3guy_A            1 MSLIVIT----GASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN-------CL-SNNVGYRARDLASHQEVEQLFEQ   68 (230)
T ss_dssp             --CEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------TC-SSCCCEEECCTTCHHHHHHHHHS
T ss_pred             CCEEEEe----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HH-hhccCeEeecCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998765432211       11 2356777777   6777777766


Q ss_pred             Cc--ccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCCEEEEecccccccCCCCCCCCCCCC
Q 015746          151 VT--FDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDV  204 (401)
Q Consensus       151 ~~--~d~Vv~~a~~--------------------~~~~~~~ll~aa~~----~gv~~~v~~SS~~vy~~~~~~~~~E~~~  204 (401)
                      ..  +|+|||+||.                    |+.++.++++++..    .+. +||++||...+....         
T Consensus        69 ~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~---------  138 (230)
T 3guy_A           69 LDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKA---------  138 (230)
T ss_dssp             CSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCT---------
T ss_pred             HhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCC---------
Confidence            42  5999999994                    45566666665544    333 899999988764321         


Q ss_pred             CCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          205 VKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                         ....|.+.|...+            .|+++..|+||.+..+...         ......         ....+++++
T Consensus       139 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~~~---------~~~~~~~~~  197 (230)
T 3guy_A          139 ---QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE---------TSGKSL---------DTSSFMSAE  197 (230)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHH
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH---------hcCCCC---------CcccCCCHH
Confidence               1255666664332            2799999999998765211         111111         124567999


Q ss_pred             HHHHHHHHHhcCCCc--CCCcEEEec
Q 015746          273 DLSSMLTLAVENPEA--ASSNIFNLV  296 (401)
Q Consensus       273 D~a~~~~~~~~~~~~--~~g~~~~~~  296 (401)
                      |+|++++.++..+..  .+|+.+...
T Consensus       198 dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          198 DAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             HHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             HHHHHHHHHHhCcCCCCccceeecCC
Confidence            999999999986554  234555443

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.56  E-value=2.3e-14  Score=132.95  Aligned_cols=183  Identities=17%  Similarity=0.144  Sum_probs=113.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ..++.++.+|   .+++.+++
T Consensus        26 ~~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~d~~~v~~~~   93 (272)
T 4dyv_A           26 TGKKIAIVT----GAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA-------AEI-GDDALCVPTDVTDPDSVRALF   93 (272)
T ss_dssp             --CCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-TSCCEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-CCCeEEEEecCCCHHHHHHHH
Confidence            346889999    99999999999999999999999999875443211       111 2467778887   56666666


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhHHHHHH----HHHhCC--CCEEEEecccccccCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSG--VKQFLFISSAGIYKPADE  196 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~----aa~~~g--v~~~v~~SS~~vy~~~~~  196 (401)
                      +..     ++|+|||+||.                     |+.++.++++    .+++.+  ..+||++||...+.... 
T Consensus        94 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-  172 (272)
T 4dyv_A           94 TATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP-  172 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC-
Confidence            532     47999999994                     3444444444    444444  35899999987664321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                 ....|.+.|...+            .|+++..|+||.+..+....         +..+.+...  ....
T Consensus       173 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---------~~~~~~~~~--~~~~  230 (272)
T 4dyv_A          173 -----------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK---------MKAGVPQAD--LSIK  230 (272)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh---------hcccchhhh--hccc
Confidence                       1245665553322            38899999999998763211         111100000  0112


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCcCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEAAS  289 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~~~  289 (401)
                      ...+.+++|+|++++.++..+....
T Consensus       231 ~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          231 VEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             -----CHHHHHHHHHHHHHSCTTSC
T ss_pred             ccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            2346799999999999999887643

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.56  E-value=3.6e-14  Score=132.47  Aligned_cols=196  Identities=15%  Similarity=0.179  Sum_probs=128.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .+++++|||    ||+|+||++++++|+++|++|++++|+.++...+.........++.  ...+.++.+|   .+++.+
T Consensus         7 l~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            7 LRGKTMFIS----GGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             CTTCEEEEE----SCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            346899999    9999999999999999999999999998765443211100111111  2356777777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----CCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----GVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|++||+||.                    |+.++.++++++...    +..+||++||...+....  
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--  160 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW--  160 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC--
Confidence            65532     57999999994                    566777777766543    556999999976543210  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               +....|.+.|...+            .|++++.|+||++...        .+.........        ..
T Consensus       161 ---------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t--------~~~~~~~~~~~--------~~  215 (285)
T 3sc4_A          161 ---------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT--------AAVQNLLGGDE--------AM  215 (285)
T ss_dssp             ---------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC--------HHHHHHHTSCC--------CC
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc--------HHHHhhccccc--------cc
Confidence                     11145665553322            3899999999843221        12333332221        11


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~  298 (401)
                      ..+..++|+|++++.++.++....|+++.+.++
T Consensus       216 ~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dgg  248 (285)
T 3sc4_A          216 ARSRKPEVYADAAYVVLNKPSSYTGNTLLCEDV  248 (285)
T ss_dssp             TTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHHH
T ss_pred             cCCCCHHHHHHHHHHHhCCcccccceEEEEcCc
Confidence            234578999999999998877555788877653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.56  E-value=2.3e-14  Score=131.26  Aligned_cols=196  Identities=17%  Similarity=0.166  Sum_probs=128.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec-CCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .+++||||    ||+|+||++++++|+++|++|+++.+ +.+.....       ..++.  ...+.++.+|   .+++..
T Consensus         6 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            6 KGKVALVT----GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET-------VYEIQSNGGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH-------HHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH-------HHHHHhcCCceEEEecCcCCHHHHHH
Confidence            46899999    99999999999999999999998754 43322211       11111  1234566666   444554


Q ss_pred             hhcCC-----------cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccC
Q 015746          147 VVGGV-----------TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (401)
Q Consensus       147 ~~~~~-----------~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~  193 (401)
                      +++..           ++|++||+||.                    |+.++.++++++...  +..+||++||...+..
T Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~  154 (255)
T 3icc_A           75 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  154 (255)
T ss_dssp             HHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC
T ss_pred             HHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC
Confidence            44331           38999999994                    466777888887665  3348999999887643


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcH-HHHHHHHHcCCCcccCC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~  260 (401)
                      ..            ....|.+.|...+            .++++..++||.+..+....... ..+........+.    
T Consensus       155 ~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----  218 (255)
T 3icc_A          155 LP------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF----  218 (255)
T ss_dssp             CT------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT----
T ss_pred             CC------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc----
Confidence            21            1245665553322            38999999999998874332111 1112222222222    


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                           ..+.+++|+|++++.++..... .+|+++++.+|..
T Consensus       219 -----~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          219 -----NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             -----CCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence                 2345899999999998876543 5689999998853

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.56  E-value=5.1e-14  Score=134.98  Aligned_cols=196  Identities=16%  Similarity=0.138  Sum_probs=127.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~  145 (401)
                      ...+++||||    ||+|.||++++++|+++|++|++++|+.++..++.........++.  ...+.++.+|   .+++.
T Consensus        42 ~l~gk~vlVT----Gas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           42 RLAGCTVFIT----GASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             TTTTCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             CCCCCEEEEe----CCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence            3456899999    9999999999999999999999999998765443221111111121  1245666677   66666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~  197 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF  197 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC
Confidence            666532     57999999993                    667777777766    5556679999999876543100


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH---------HH--hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYI---------SE--NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~---------~e--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                +....|.+.|..         .|  .++++..|.||.+...        .+.+.+....+         .
T Consensus       198 ----------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T--------~~~~~~~~~~~---------~  250 (346)
T 3kvo_A          198 ----------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT--------AAMDMLGGPGI---------E  250 (346)
T ss_dssp             ----------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC--------HHHHHHCC--C---------G
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc--------HHHHhhccccc---------c
Confidence                      112455555533         22  2788999999964332        12222222122         1


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~  298 (401)
                      ..+..++|+|++++.++.+....+|+++ +.++
T Consensus       251 ~r~~~pedvA~~v~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          251 SQCRKVDIIADAAYSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             GGCBCTHHHHHHHHHHHTSCTTCCSCEE-EHHH
T ss_pred             ccCCCHHHHHHHHHHHHhcCCCCCceEE-ECCc
Confidence            2345789999999999988444567877 5543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.56  E-value=1.1e-14  Score=132.73  Aligned_cols=186  Identities=15%  Similarity=0.126  Sum_probs=121.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.........++..|     .+++.+
T Consensus        12 l~~k~vlIT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~d~d~~~~~~~~~   83 (247)
T 3i1j_A           12 LKGRVILVT----GAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSD----QIKSAGQPQPLIIALNLENATAQQYRE   83 (247)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHTTSCCCEEEECCTTTCCHHHHHH
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHH----HHHhcCCCCceEEEeccccCCHHHHHH
Confidence            456899999    999999999999999999999999998755432111    1111111344555544     455555


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|+|||+||.                     |+.++.++++++    ++.+..++|++||...+.... 
T Consensus        84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-  162 (247)
T 3i1j_A           84 LAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA-  162 (247)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC-
Confidence            55432     47999999994                     355666666665    556667999999987654321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH-------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE-------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e-------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                 ....|.+.|...+             .++++..|+||.+..+         +.........        
T Consensus       163 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~---------~~~~~~~~~~--------  214 (247)
T 3i1j_A          163 -----------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG---------MRAQAYPDEN--------  214 (247)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH---------HHHHHSTTSC--------
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc---------cchhcccccC--------
Confidence                       1245665553322             2677889999987553         2222221111        


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEe
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  295 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~  295 (401)
                       ...+..++|+|++++.++.+... .+|+++++
T Consensus       215 -~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          215 -PLNNPAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             -GGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             -ccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence             12345789999999999976543 55788775

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.55  E-value=3.4e-14  Score=132.80  Aligned_cols=197  Identities=16%  Similarity=0.123  Sum_probs=125.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC-------Hhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD-------PAE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D-------~~~  143 (401)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+. ++...+..    .+.......+.++.+|       .++
T Consensus        21 l~~k~~lVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           21 MEAPAAVVT----GAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLAD----ELNKERSNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             -CCCEEEET----TCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHH----HHHHHSTTCEEEEECCCSCSTTHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHH----HHHhhcCCceEEEEeecCCccCCHHH
Confidence            456899999    9999999999999999999999999987 43322110    0000011245566666       455


Q ss_pred             HHHhhcCC-----cccEEEeCCCCC------------------------------hhhHHHHHHHHHh----CC------
Q 015746          144 VGNVVGGV-----TFDVVLDNNGKN------------------------------LDAVRPVADWAKS----SG------  178 (401)
Q Consensus       144 ~~~~~~~~-----~~d~Vv~~a~~~------------------------------~~~~~~ll~aa~~----~g------  178 (401)
                      +.++++..     ++|+|||+||..                              +.++.++++++..    .+      
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           93 CEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            55555422     479999999841                              1223344454432    23      


Q ss_pred             CCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHH
Q 015746          179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWF  246 (401)
Q Consensus       179 v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~  246 (401)
                      ..+||++||...+...            +....|.+.|...         |   .|+++++|+||.++++. .. . ...
T Consensus       173 ~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~-~~~  237 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQPC------------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-G-EEE  237 (288)
T ss_dssp             CEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-C-HHH
T ss_pred             CeEEEEEecccccCCC------------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc-C-hHH
Confidence            4589999998876432            1124566665322         2   38999999999999986 21 1 222


Q ss_pred             HHHHHcCCCcccCCCCcceeee-eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          247 FDRIVRKRPVPIPGSGMQFTNI-AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~-v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ...+....+..         .+ .+++|+|++++.++..... ..|+++++.+|..
T Consensus       238 ~~~~~~~~p~~---------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          238 KDKWRRKVPLG---------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             HHHHHHTCTTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhhCCCC---------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            33333333321         12 5789999999999986543 5579999998753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.55  E-value=2.3e-14  Score=130.63  Aligned_cols=180  Identities=13%  Similarity=0.144  Sum_probs=106.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHH------H
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG------N  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~------~  146 (401)
                      ++++||||    ||+|+||++++++|++ |+.|++++|+.+....+..          ..++.++.+|..+..      +
T Consensus         4 ~~k~vlIT----Gas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~   68 (245)
T 3e9n_A            4 KKKIAVVT----GATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVD   68 (245)
T ss_dssp             --CEEEEE----STTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCG
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHH
Confidence            46889999    9999999999999987 9999999998755432211          135778888843332      2


Q ss_pred             hhcCC-cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          147 VVGGV-TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       147 ~~~~~-~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .++.. ++|+|||+||.                    |+.++.+++++    +++.+ .++|++||...+....      
T Consensus        69 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~------  141 (245)
T 3e9n_A           69 KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHP------  141 (245)
T ss_dssp             GGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCC------
Confidence            22322 48999999994                    34444444444    44445 5899999988765431      


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            ....|.+.|...+            .|+++++++||.+.++....     +.....         .......++
T Consensus       142 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~---------~~~~~~~~~  201 (245)
T 3e9n_A          142 ------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDSQG---------TNFRPEIYI  201 (245)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGS
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhhhh---------cccccccCC
Confidence                  1245665553322            38999999999998874221     111110         111123467


Q ss_pred             eHHHHHHHHHHHhcCCCcCCCcEEEec
Q 015746          270 HVRDLSSMLTLAVENPEAASSNIFNLV  296 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~~~g~~~~~~  296 (401)
                      +++|+|++++.+++.+..  +.++|+.
T Consensus       202 ~p~dvA~~i~~l~~~~~~--~~~~~i~  226 (245)
T 3e9n_A          202 EPKEIANAIRFVIDAGET--TQITNVD  226 (245)
T ss_dssp             CHHHHHHHHHHHHTSCTT--EEEEEEE
T ss_pred             CHHHHHHHHHHHHcCCCc--cceeeeE
Confidence            899999999999988775  4677765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.55  E-value=3.5e-14  Score=130.88  Aligned_cols=186  Identities=16%  Similarity=0.151  Sum_probs=118.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.. ....+.++.+|   .+++.+++
T Consensus        27 l~~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~v~~~~   97 (262)
T 3rkr_A           27 LSGQVAVVT----GASRGIGAAIARKLGSLGARVVLTARDVEKLRAVER----EIVA-AGGEAESHACDLSHSDAIAAFA   97 (262)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHH-TTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHH-hCCceeEEEecCCCHHHHHHHH
Confidence            446899999    999999999999999999999999998755432110    0000 11346677777   56666665


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhHHHHHHH----HHhCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~~~ll~a----a~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|+|||+||.                     |+.++.+++++    +++.+..+||++||...+....   
T Consensus        98 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  174 (262)
T 3rkr_A           98 TGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA---  174 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT---
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC---
Confidence            542     47999999995                     34455555554    4456667999999987764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|++.|...+            .|+++++|+||.+..+....         ....         ....
T Consensus       175 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~~---------~~~~  227 (262)
T 3rkr_A          175 ---------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---------LSAK---------KSAL  227 (262)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc---------cccc---------cccc
Confidence                     1245665553222            38999999999987653211         1110         1123


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEec
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  296 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~  296 (401)
                      .+++++|+|++++.++..... ..|+++...
T Consensus       228 ~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          228 GAIEPDDIADVVALLATQADQSFISEVLVRP  258 (262)
T ss_dssp             -CCCHHHHHHHHHHHHTCCTTCCEEEEEEEC
T ss_pred             cCCCHHHHHHHHHHHhcCccccccCcEEecc
Confidence            456899999999999987665 224555433

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.54  E-value=7.5e-15  Score=136.85  Aligned_cols=193  Identities=15%  Similarity=0.164  Sum_probs=125.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.++...+.        ......+.++.+|   .+++.++++
T Consensus         4 ~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~   71 (281)
T 3zv4_A            4 TGEVALIT----GGASGLGRALVDRFVAEGARVAVLDKSAERLRELE--------VAHGGNAVGVVGDVRSLQDQKRAAE   71 (281)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTBTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH--------HHcCCcEEEEEcCCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999875543211        1112356777777   555555554


Q ss_pred             CC-----cccEEEeCCCC-------------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCC
Q 015746          150 GV-----TFDVVLDNNGK-------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~  195 (401)
                      ..     ++|++||+||.                         |+.++.++++++.    +.+ .++|++||...+....
T Consensus        72 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~  150 (281)
T 3zv4_A           72 RCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNG  150 (281)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSS
T ss_pred             HHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCC
Confidence            32     47999999984                         2344455555543    333 5899999987654321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH---------h--CCCeEEEecCeeecCCCCCC---cHH------HHHHHHHcCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE---------N--FSNWASFRPQYMIGSGNNKD---CEE------WFFDRIVRKRP  255 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e---------~--g~~~~ilRp~~v~G~~~~~~---~~~------~~~~~~~~~~~  255 (401)
                                  ....|.+.|...+         .  .+++..|+||.+..+.....   ...      .+.+.+....+
T Consensus       151 ------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  218 (281)
T 3zv4_A          151 ------------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP  218 (281)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC
Confidence                        1245666553322         2  48899999999987632110   000      01222333333


Q ss_pred             cccCCCCcceeeeeeHHHHHHHHHHHhcC-CCc-CCCcEEEecCCC
Q 015746          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVEN-PEA-ASSNIFNLVSDR  299 (401)
Q Consensus       256 ~~~~~~~~~~~~~v~v~D~a~~~~~~~~~-~~~-~~g~~~~~~~~~  299 (401)
                      +.         .+..++|+|++++.++.. ... ..|+++++.+|.
T Consensus       219 ~~---------r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~  255 (281)
T 3zv4_A          219 IG---------RMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM  255 (281)
T ss_dssp             TS---------SCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred             CC---------CCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence            32         245789999999999983 333 568999999885

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.54  E-value=2.1e-14  Score=132.50  Aligned_cols=193  Identities=17%  Similarity=0.167  Sum_probs=118.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~~  147 (401)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ...+.++.+|   .+++.++
T Consensus         3 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   71 (264)
T 3tfo_A            3 MDKVILIT----GASGGIGEGIARELGVAGAKILLGARRQARIEAIA-------TEIRDAGGTALAQVLDVTDRHSVAAF   71 (264)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            35789999    99999999999999999999999999875543211       1111  1245566677   5666665


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|++||+||.                    |+.++.++++    .+++.+..+||++||...+....   
T Consensus        72 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~---  148 (264)
T 3tfo_A           72 AQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP---  148 (264)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC---
Confidence            5432     47999999994                    3445544444    44455667999999988764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHH---------Hh-CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS---------EN-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~---------e~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                               ....|.+.|...         |. |++++.|+||.+..+....         ............  ....+
T Consensus       149 ---------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~---------~~~~~~~~~~~~--~~~~~  208 (264)
T 3tfo_A          149 ---------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT---------ITHEETMAAMDT--YRAIA  208 (264)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------C
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc---------ccchhHHHHHHh--hhccC
Confidence                     124566665332         22 7889999999987763211         100000000000  01124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..++|+|++++.+++.+.. ..+++.....++
T Consensus       209 ~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          209 LQPADIARAVRQVIEAPQSVDTTEITIRPTAS  240 (264)
T ss_dssp             CCHHHHHHHHHHHHHSCTTEEEEEEEEEECC-
T ss_pred             CCHHHHHHHHHHHhcCCccCccceEEEecCcc
Confidence            6899999999999998876 234555555443

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.54  E-value=1.7e-14  Score=131.51  Aligned_cols=189  Identities=12%  Similarity=0.111  Sum_probs=118.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEE-e--cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhH----HH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-T--VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV----GN  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~----~~  146 (401)
                      +|+||||    ||+|+||++++++|+++|++|+++ +  |+.++...+.       .++  .+.++.  |.+++    +.
T Consensus         1 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~-------~~~--~~~~~~--~~~~v~~~~~~   65 (244)
T 1zmo_A            1 MVIALVT----HARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE-------SEN--PGTIAL--AEQKPERLVDA   65 (244)
T ss_dssp             -CEEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-------HHS--TTEEEC--CCCCGGGHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHH-------HHh--CCCccc--CHHHHHHHHHH
Confidence            4789999    999999999999999999999999 6  8765433211       111  122222  43333    33


Q ss_pred             hhcCC-cccEEEeCCCC-----------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          147 VVGGV-TFDVVLDNNGK-----------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       147 ~~~~~-~~d~Vv~~a~~-----------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +.+.. ++|+|||+||.                       |+.++.++++++    ++.+..+||++||...+....   
T Consensus        66 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---  142 (244)
T 1zmo_A           66 TLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA---  142 (244)
T ss_dssp             HGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT---
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC---
Confidence            33322 48999999983                       233444555544    456667999999988765321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCC---CCCcH-HHHHHHHHc-CCCcccCCC
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN---NKDCE-EWFFDRIVR-KRPVPIPGS  261 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~---~~~~~-~~~~~~~~~-~~~~~~~~~  261 (401)
                               ....|...|...+            .|+++++|+||.+..+..   .. .. ......+.. ..+.     
T Consensus       143 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~p~-----  207 (244)
T 1zmo_A          143 ---------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSD-WENNPELRERVDRDVPL-----  207 (244)
T ss_dssp             ---------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHH-HHHCHHHHHHHHHHCTT-----
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccc-ccchHHHHHHHhcCCCC-----
Confidence                     1244555543222            389999999999977642   11 00 011122221 1121     


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                          ..+..++|+|++++.++..... ..|+++.+.+|.
T Consensus       208 ----~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          208 ----GRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             ----CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             ----CCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence                1245899999999999987553 567999998874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.53  E-value=2.1e-14  Score=130.23  Aligned_cols=171  Identities=14%  Similarity=0.109  Sum_probs=114.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++ ..++.++.+|   .+++.++++
T Consensus         2 s~k~vlVT----Gas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~~   69 (235)
T 3l6e_A            2 SLGHIIVT----GAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE-------LLL-GNAVIGIVADLAHHEDVDVAFA   69 (235)
T ss_dssp             -CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-GGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-cCCceEEECCCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999875543211       111 1256777777   566666554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|++||+||.                    |+.++.++++++    ++.+- ++|++||...+....     
T Consensus        70 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~-----  143 (235)
T 3l6e_A           70 AAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGG-VLANVLSSAAQVGKA-----  143 (235)
T ss_dssp             HHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEECCEECCSSCS-----
T ss_pred             HHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-EEEEEeCHHhcCCCC-----
Confidence            32     47999999994                    455665555555    33342 899999977654321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|.+.|...+            .|+++..|+||.+..+....         ... .         ....+
T Consensus       144 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---------~~~-~---------~~~~~  197 (235)
T 3l6e_A          144 -------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN---------TDH-V---------DPSGF  197 (235)
T ss_dssp             -------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------C
T ss_pred             -------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc---------cCC-C---------CCcCC
Confidence                   1245666554332            27899999999997663211         000 0         01246


Q ss_pred             eeHHHHHHHHHHHhcCCCc
Q 015746          269 AHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~  287 (401)
                      .+++|+|++++.++.++..
T Consensus       198 ~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          198 MTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             BCHHHHHHHHHHHTCCCSS
T ss_pred             CCHHHHHHHHHHHHhCCCC
Confidence            7899999999999987654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.53  E-value=2e-14  Score=131.62  Aligned_cols=190  Identities=13%  Similarity=0.111  Sum_probs=121.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~~  146 (401)
                      .+++++|||    ||+|+||++++++|+++|++|++++|+.++...+..    .+...  ....+.++.+|   .+++.+
T Consensus         5 ~~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~   76 (250)
T 3nyw_A            5 KQKGLAIIT----GASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHD----EIMRSNKHVQEPIVLPLDITDCTKADT   76 (250)
T ss_dssp             CCCCEEEEE----STTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHH----HHHHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHhccccCcceEEeccCCCHHHHHH
Confidence            346899999    999999999999999999999999998765432111    00000  11356777777   555666


Q ss_pred             hhcCC-----cccEEEeCCCC-------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK-------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~-------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +++..     ++|++||+||.                   |+.++.++++++    ++.+..++|++||...+....   
T Consensus        77 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  153 (250)
T 3nyw_A           77 EIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFA---  153 (250)
T ss_dssp             HHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------C---
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCC---
Confidence            55432     48999999994                   344555555554    555667999999977653211   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|.+.|...+            .|+++..|+||.+..+         +........         ...
T Consensus       154 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---------~~~~~~~~~---------~~~  206 (250)
T 3nyw_A          154 ---------DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---------MAKKAGTPF---------KDE  206 (250)
T ss_dssp             ---------CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---------HHHHTTCCS---------CGG
T ss_pred             ---------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---------hhhhcCCCc---------ccc
Confidence                     1255666664322            3899999999998654         122211111         123


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc--CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA--ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~--~~g~~~~~~~~~  299 (401)
                      .+++++|+|++++.++..+..  .++.++.+.+++
T Consensus       207 ~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~  241 (250)
T 3nyw_A          207 EMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSI  241 (250)
T ss_dssp             GSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHH
T ss_pred             cCCCHHHHHHHHHHHHcCCCceEeeEEEEEeeccc
Confidence            467999999999999987765  334455665543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.53  E-value=3.1e-14  Score=131.52  Aligned_cols=185  Identities=12%  Similarity=0.077  Sum_probs=124.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .+++||||    ||+|+||++++++|++ +|++|++++|+.++.....       .++.  ...+.++.+|   .+++.+
T Consensus         3 ~~k~vlIT----GasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~   71 (276)
T 1wma_A            3 GIHVALVT----GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-------QQLQAEGLSPRFHQLDIDDLQSIRA   71 (276)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-------HHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-------HHHHhcCCeeEEEECCCCCHHHHHH
Confidence            46899999    9999999999999999 9999999999865432210       1111  1356777787   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCC--CEEEEecccccccCC-C---
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPA-D---  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv--~~~v~~SS~~vy~~~-~---  195 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++...-.  .+||++||...+... .   
T Consensus        72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  151 (276)
T 1wma_A           72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP  151 (276)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCH
T ss_pred             HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCCh
Confidence            66532     47999999984                    45667788888877632  489999998776320 0   


Q ss_pred             -------CCCCCCCC-------------------CCCCCCChHHHHHHHH---------H-------hCCCeEEEecCee
Q 015746          196 -------EPPHVEGD-------------------VVKPDAGHVQVEKYIS---------E-------NFSNWASFRPQYM  233 (401)
Q Consensus       196 -------~~~~~E~~-------------------~~~~~~~~~~~ek~~~---------e-------~g~~~~ilRp~~v  233 (401)
                             ..++.|++                   ...+. ..|+..|...         +       .++++++|+||.|
T Consensus       152 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v  230 (276)
T 1wma_A          152 ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV  230 (276)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB
T ss_pred             hHHhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcc
Confidence                   01111111                   01122 5666665222         2       3789999999999


Q ss_pred             ecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCC---cCCCcEEE
Q 015746          234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE---AASSNIFN  294 (401)
Q Consensus       234 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~g~~~~  294 (401)
                      .++....                         ..+.+++|+|+.++.++..+.   ..+|+.|+
T Consensus       231 ~t~~~~~-------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          231 RTDMAGP-------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             CSTTTCT-------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ccCcCCc-------------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            7763221                         124689999999999998653   34567776

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.53  E-value=1e-14  Score=135.21  Aligned_cols=173  Identities=13%  Similarity=0.061  Sum_probs=116.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+....+.       .++.  ..++.++.+|   .+++.+
T Consensus        29 l~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~v~~   97 (272)
T 1yb1_A           29 VTGEIVLIT----GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-------AKCKGLGAKVHTFVVDCSNREDIYS   97 (272)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-------HHHHhcCCeEEEEEeeCCCHHHHHH
Confidence            456899999    99999999999999999999999999875432211       1111  1356777787   556666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.++.    .+++.+++.+.++||++||...+....  
T Consensus        98 ~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--  175 (272)
T 1yb1_A           98 SAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP--  175 (272)
T ss_dssp             HHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH--
T ss_pred             HHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC--
Confidence            55422     47999999984                    334433    444455566778999999988764321  


Q ss_pred             CCCCCCCCCCCCChHHHHH-----HH----HHh------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCC
Q 015746          198 PHVEGDVVKPDAGHVQVEK-----YI----SEN------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek-----~~----~e~------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (401)
                                ....|+..|     +.    .+.      |+++++||||.+.++.....              .      
T Consensus       176 ----------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~--------------~------  225 (272)
T 1yb1_A          176 ----------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------S------  225 (272)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------H------
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc--------------c------
Confidence                      113344444     22    222      78999999999987742210              0      


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      .....+++++|+|++++.++.++..
T Consensus       226 ~~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          226 TSLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             HHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             ccccCCCCHHHHHHHHHHHHHcCCC
Confidence            0113467899999999999987654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.52  E-value=7.1e-14  Score=129.69  Aligned_cols=191  Identities=13%  Similarity=0.110  Sum_probs=121.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++|++|||    ||+|.||++++++|+++|++|++++|+.++...+.........++.  ...+.++.+|   .+++.+
T Consensus         4 l~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            4 LSGKTLFIT----GASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred             CCCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            356899999    9999999999999999999999999998765443221100111111  2356677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|++||+||.                    |+.++.++++++    ++.+..++|++||...+....  
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--  157 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW--  157 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH--
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC--
Confidence            55432     47999999994                    556666666654    445667999999977653210  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                              .+....|.+.|...+            .|+++..|+||.+....        +. ....+.+.         
T Consensus       158 --------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~--------~~-~~~~~~~~---------  211 (274)
T 3e03_A          158 --------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD--------AI-NMLPGVDA---------  211 (274)
T ss_dssp             --------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCCG---------
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc--------hh-hhcccccc---------
Confidence                    011144665553322            38999999999543321        01 11111111         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEE
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFN  294 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~  294 (401)
                      ..+..++|+|++++.++..... .+|++++
T Consensus       212 ~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          212 AACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             GGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             cccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            1256899999999999987654 4578774

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.52  E-value=5.6e-14  Score=128.37  Aligned_cols=183  Identities=19%  Similarity=0.143  Sum_probs=118.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++|++|||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ..++.++.+|   ++++.+
T Consensus         5 l~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~~~~~~~~   73 (247)
T 2jah_A            5 LQGKVALIT----GASSGIGEATARALAAEGAAVAIAARRVEKLRALG-------DELTAAGAKVHVLELDVADRQGVDA   73 (247)
T ss_dssp             TTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHH
Confidence            346899999    99999999999999999999999999875433211       1111  1346677777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCCEEEEecccccccCCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~----~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +++..     ++|+|||+||.                    |+.++.++++++.    +.+ .+||++||...+...   
T Consensus        74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---  149 (247)
T 2jah_A           74 AVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV---  149 (247)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC---
Confidence            65421     47999999984                    3455556665543    445 799999998766432   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                               +....|...|...            ..|+++++|+||.+.++......... .......    .++.    
T Consensus       150 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~----~~~~----  211 (247)
T 2jah_A          150 ---------RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQ----RISQ----  211 (247)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHH----HTTT----
T ss_pred             ---------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHh----cccc----
Confidence                     1124566555322            23899999999999876321110011 1111111    1110    


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ..+++++|+|++++.++.++..
T Consensus       212 ~~~~~pedvA~~v~~l~s~~~~  233 (247)
T 2jah_A          212 IRKLQAQDIAEAVRYAVTAPHH  233 (247)
T ss_dssp             SCCBCHHHHHHHHHHHHHSCTT
T ss_pred             cCCCCHHHHHHHHHHHhCCCcc
Confidence            1147899999999999987654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.52  E-value=2.1e-13  Score=125.33  Aligned_cols=199  Identities=14%  Similarity=0.055  Sum_probs=131.4

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .++|.+|||    ||+|  .||+.++++|+++|++|++.+|+.+..+.+.+    ...++...++.++.+|   ++++.+
T Consensus         4 l~gK~alVT----Gaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (256)
T 4fs3_A            4 LENKTYVIM----GIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEK----LLEQLNQPEAHLYQIDVQSDEEVIN   75 (256)
T ss_dssp             CTTCEEEEE----CCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HHGGGTCSSCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhcCCCcEEEEEccCCCHHHHHH
Confidence            457899999    9877  89999999999999999999998765433211    1223333467788888   555555


Q ss_pred             hhcCC-----cccEEEeCCCCC------------------------hhhHHHHHHHHHhC--CCCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGKN------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~~------------------------~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|++||++|..                        +.+...+..++...  +-.++|++||....... 
T Consensus        76 ~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~-  154 (256)
T 4fs3_A           76 GFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV-  154 (256)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC-
T ss_pred             HHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc-
Confidence            54322     479999999841                        12222333333332  12489999997754322 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~  262 (401)
                                 +....|.+.|..         .|   +|+++..|.||.+..+.... ...+.+.+.+....|+..++  
T Consensus       155 -----------~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g--  221 (256)
T 4fs3_A          155 -----------QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNV--  221 (256)
T ss_dssp             -----------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCC--
T ss_pred             -----------ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCc--
Confidence                       112556666632         22   48999999999987763322 12234455666656654444  


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                             .++|+|.+++.++.+... ..|+++.+.||.
T Consensus       222 -------~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          222 -------DQVEVGKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             -------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -------CHHHHHHHHHHHhCchhcCccCCEEEECcCH
Confidence                   689999999999876544 568999999874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.51  E-value=4.2e-14  Score=131.78  Aligned_cols=185  Identities=15%  Similarity=0.167  Sum_probs=115.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++......    .+.......+.++.+|   .+++.+++
T Consensus        31 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~  102 (281)
T 4dry_A           31 GEGRIALVT----GGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAG----EIGGRTGNIVRAVVCDVGDPDQVAALF  102 (281)
T ss_dssp             ---CEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhcCCCeEEEEEcCCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998754432111    1111111223677777   56666665


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhH----HHHHHHHHhCC--CCEEEEecccccccCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAV----RPVADWAKSSG--VKQFLFISSAGIYKPADE  196 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~----~~ll~aa~~~g--v~~~v~~SS~~vy~~~~~  196 (401)
                      +..     ++|+|||+||.                     |+.++    +.++..+++.+  ..+||++||...+...  
T Consensus       103 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--  180 (281)
T 4dry_A          103 AAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR--  180 (281)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC--
Confidence            533     47999999984                     23443    34444455543  4589999998765432  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                                +....|.+.|...+            .|+++..|+||.+..+..         ..+... ..... ....
T Consensus       181 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---------~~~~~~-~~~~~-~~~~  239 (281)
T 4dry_A          181 ----------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT---------ARMSTG-VLQAN-GEVA  239 (281)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE-EECTT-SCEE
T ss_pred             ----------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh---------hhhcch-hhhhh-hccc
Confidence                      12255666553322            389999999999877632         111111 00110 1112


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ...++.++|+|++++.++..+..
T Consensus       240 ~~~~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          240 AEPTIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             ECCCBCHHHHHHHHHHHHHSCTT
T ss_pred             ccCCCCHHHHHHHHHHHhCCCcc
Confidence            23467899999999999998876

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.50  E-value=5.9e-13  Score=122.34  Aligned_cols=189  Identities=14%  Similarity=0.100  Sum_probs=123.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++.+|+.++...               ....+.+|   .+++.+++
T Consensus         9 L~GK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~---------------~~~~~~~Dv~~~~~v~~~~   69 (261)
T 4h15_A            9 LRGKRALIT----AGTKGAGAATVSLFLELGAQVLTTARARPEGLP---------------EELFVEADLTTKEGCAIVA   69 (261)
T ss_dssp             CTTCEEEES----CCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC---------------TTTEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----ccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC---------------cEEEEEcCCCCHHHHHHHH
Confidence            356899999    999999999999999999999999997643211               12244555   55555554


Q ss_pred             cCC-----cccEEEeCCCC----------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK----------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~----------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +..     ++|++||+||.                      |+.    .++.++..+++.+-.++|++||...+....  
T Consensus        70 ~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~--  147 (261)
T 4h15_A           70 EATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP--  147 (261)
T ss_dssp             HHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC--
Confidence            332     48999999983                      233    345555566666667899999977543211  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCC-------------CcHHHHHHHHHc
Q 015746          198 PHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNK-------------DCEEWFFDRIVR  252 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~-------------~~~~~~~~~~~~  252 (401)
                               .....|.+.|...         |   +|+++..|.||.+..+....             .....++.....
T Consensus       148 ---------~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (261)
T 4h15_A          148 ---------ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLG  218 (261)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTT
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhc
Confidence                     0124555555322         2   48999999999986542100             001112222233


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..|+..         +..++|+|.+++.++.+... .+|+++++.||-
T Consensus       219 ~~PlgR---------~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          219 GIPLGR---------PAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             CCTTSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCC---------CcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            334333         34789999999998876544 568999999874

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.50  E-value=2.7e-13  Score=123.84  Aligned_cols=196  Identities=15%  Similarity=0.116  Sum_probs=130.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++++|+.++.+.+.       .++.  ...+..+.+|   ++++.+
T Consensus         5 L~gKvalVT----Gas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-------~~i~~~g~~~~~~~~Dvt~~~~v~~   73 (254)
T 4fn4_A            5 LKNKVVIVT----GAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-------QELRGMGKEVLGVKADVSKKKDVEE   73 (254)
T ss_dssp             GTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHH
Confidence            467999999    99999999999999999999999999886554321       1222  1345667777   666665


Q ss_pred             hhcCC-----cccEEEeCCCC---------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK---------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~---------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++..     ++|++||+||.                     |+    ..++.++..+++.+-.++|++||...+...  
T Consensus        74 ~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~--  151 (254)
T 4fn4_A           74 FVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG--  151 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS--
T ss_pred             HHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC--
Confidence            55432     48999999993                     23    345566666666666799999997765322  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcC-CCcccCCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRK-RPVPIPGS  261 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~-~~~~~~~~  261 (401)
                                +....|.+.|..         .|   +|+++..|.||.+-.+.....  ............ .+...   
T Consensus       152 ----------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R---  218 (254)
T 4fn4_A          152 ----------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSR---  218 (254)
T ss_dssp             ----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCC---
T ss_pred             ----------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCC---
Confidence                      112556666532         22   489999999999977632111  111112222221 12222   


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                            +..++|+|.+++.++.+... ..|+++++.||.
T Consensus       219 ------~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          219 ------LAEPEDIANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             ------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ------CcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence                  23689999999999876654 568999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.49  E-value=1.8e-13  Score=126.32  Aligned_cols=195  Identities=16%  Similarity=0.172  Sum_probs=132.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.+..+..       ..++ ...+..+.+|   ++++++++
T Consensus        27 L~gKvalVT----Gas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~-------~~~~-g~~~~~~~~Dv~~~~~v~~~~   94 (273)
T 4fgs_A           27 LNAKIAVIT----GATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA-------IAEI-GGGAVGIQADSANLAELDRLY   94 (273)
T ss_dssp             TTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------HHHH-CTTCEEEECCTTCHHHHHHHH
T ss_pred             hCCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-------HHHc-CCCeEEEEecCCCHHHHHHHH
Confidence            456899999    9999999999999999999999999988655432       1222 2356677777   56666555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +..     ++|++||+||.                    |+.++..+.+++...  .-.++|++||...+....      
T Consensus        95 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~------  168 (273)
T 4fgs_A           95 EKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP------  168 (273)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC------
Confidence            432     48999999994                    466666666665443  123799999977653321      


Q ss_pred             CCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCC----C--cHHHHHHHHHcCCCcccCCCCc
Q 015746          202 GDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNK----D--CEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                            ....|.+.|...         |   +|+++..|.||.+..+....    .  ....+.+.+....|+..++   
T Consensus       169 ------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g---  239 (273)
T 4fgs_A          169 ------AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVG---  239 (273)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCB---
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCc---
Confidence                  125666666332         2   37899999999987763211    0  1122344555555554444   


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                            .++|+|.+++.++.+... ..|+++.+.||.
T Consensus       240 ------~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          240 ------RAEEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             ------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ------CHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence                  689999999999976654 568999999875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.48  E-value=1.1e-13  Score=129.21  Aligned_cols=178  Identities=15%  Similarity=0.061  Sum_probs=115.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++...+..    .+.......+.++.+|   .+++.+++
T Consensus        26 ~~~k~vlIT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~v~~~~   97 (286)
T 1xu9_A           26 LQGKKVIVT----GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFV   97 (286)
T ss_dssp             GTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998754332110    0011111246677777   55566655


Q ss_pred             cCC-----cccEEEeC-CCC-------------------ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCCC
Q 015746          149 GGV-----TFDVVLDN-NGK-------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~~-----~~d~Vv~~-a~~-------------------~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +..     ++|+|||+ ++.                   |+.++.++++++...   +.++||++||...+....     
T Consensus        98 ~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  172 (286)
T 1xu9_A           98 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP-----  172 (286)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT-----
T ss_pred             HHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC-----
Confidence            421     47999999 452                   345666666655432   235899999988764321     


Q ss_pred             CCCCCCCCCChHHHHHHH---------HHh-----CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          201 EGDVVKPDAGHVQVEKYI---------SEN-----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~---------~e~-----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                             ....|...|..         .|.     ++++++++||.+.++.         ......+         ....
T Consensus       173 -------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---------~~~~~~~---------~~~~  227 (286)
T 1xu9_A          173 -------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---------AMKAVSG---------IVHM  227 (286)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---------HHHHSCG---------GGGG
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---------HHHhccc---------cccC
Confidence                   12445544432         222     7889999999986541         1111111         1123


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc
Q 015746          267 NIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      .+++++|+|+.++.+++.+..
T Consensus       228 ~~~~~~~vA~~i~~~~~~~~~  248 (286)
T 1xu9_A          228 QAAPKEECALEIIKGGALRQE  248 (286)
T ss_dssp             GCBCHHHHHHHHHHHHHTTCS
T ss_pred             CCCCHHHHHHHHHHHHhcCCc
Confidence            467899999999999987654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.47  E-value=9e-13  Score=120.81  Aligned_cols=197  Identities=12%  Similarity=0.083  Sum_probs=129.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.+......     ... -...++..+.+|   ++++.+++
T Consensus         5 L~gKvalVT----Gas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~Dv~~~~~v~~~v   74 (258)
T 4gkb_A            5 LQDKVVIVT----GGASGIGGAISMRLAEERAIPVVFARHAPDGAFLD-----ALA-QRQPRATYLPVELQDDAQCRDAV   74 (258)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHH-----HHH-HHCTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHH-----HHH-hcCCCEEEEEeecCCHHHHHHHH
Confidence            357899999    99999999999999999999999999876532110     011 112466777787   55555544


Q ss_pred             cCC-----cccEEEeCCCC-------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~-------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +..     ++|++||+||.                   |+.+    ++.++..+++.+ .++|++||...+....     
T Consensus        75 ~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~-----  148 (258)
T 4gkb_A           75 AQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQG-----  148 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCS-----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCC-----
Confidence            332     48999999994                   2333    344444555444 5899999987654321     


Q ss_pred             CCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcccCCCCc
Q 015746          201 EGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                             ....|.+.|...         |   +|+++..|.||.+..+.....     ........+....|+.      
T Consensus       149 -------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg------  215 (258)
T 4gkb_A          149 -------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG------  215 (258)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT------
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC------
Confidence                   125566666322         2   489999999999977642211     1111234444444431      


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        .-+..++|+|.+++.++.+... ..|+++++.||.
T Consensus       216 --~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          216 --RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             --TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             --CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence              1233689999999998876654 568999999885

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.47  E-value=9.1e-13  Score=131.89  Aligned_cols=201  Identities=15%  Similarity=0.156  Sum_probs=129.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .+++||||    ||+|+||.+++++|+++|++ |++++|+.........    ...++..  ..+.++.+|   .+++.+
T Consensus       225 ~~~~vLIT----GgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~----l~~~l~~~g~~v~~~~~Dv~d~~~v~~  296 (486)
T 2fr1_A          225 PTGTVLVT----GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGE----LVAELEALGARTTVAACDVTDRESVRE  296 (486)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHH----HHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence            46899999    99999999999999999995 8999998743221100    0111221  245677777   677777


Q ss_pred             hhcCC----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEeccccc-ccCCCCCCCCC
Q 015746          147 VVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVE  201 (401)
Q Consensus       147 ~~~~~----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~v-y~~~~~~~~~E  201 (401)
                      +++..    ++|+|||+||.                    |+.++.++.+++++.+.++||++||... ++......   
T Consensus       297 ~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~---  373 (486)
T 2fr1_A          297 LLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGG---  373 (486)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTT---
T ss_pred             HHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHH---
Confidence            77664    57999999994                    5788999999999988899999999754 44332111   


Q ss_pred             CCCCCCCCChHHHHHHH---HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          202 GDVVKPDAGHVQVEKYI---SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~---~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                           +..+|...+.+.   +..|+++++|+||.+++.+-..        .... ..+.  .   .-..+++.+|+++++
T Consensus       374 -----Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~--------~~~~-~~~~--~---~g~~~i~~e~~a~~l  434 (486)
T 2fr1_A          374 -----YAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAE--------GPVA-DRFR--R---HGVIEMPPETACRAL  434 (486)
T ss_dssp             -----THHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------------CT--T---TTEECBCHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccc--------hhHH-HHHH--h---cCCCCCCHHHHHHHH
Confidence                 111233333332   2349999999999988763111        1000 0011  1   124678999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCCCCCHHHHHHHH
Q 015746          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLC  310 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i  310 (401)
                      ..++..+..   .+.. .   .+.+..+...+
T Consensus       435 ~~~l~~~~~---~~~v-~---~~d~~~~~~~~  459 (486)
T 2fr1_A          435 QNALDRAEV---CPIV-I---DVRWDRFLLAY  459 (486)
T ss_dssp             HHHHHTTCS---SCEE-C---EECHHHHHHHH
T ss_pred             HHHHhCCCC---eEEE-E---eCCHHHHhhhh
Confidence            999987654   2332 2   25666665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.47  E-value=1.9e-13  Score=135.69  Aligned_cols=193  Identities=15%  Similarity=0.123  Sum_probs=126.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .++++|||    ||+|.||.+++++|+++|++|++++|+..... +.       ......++.++.+|   .+++.++++
T Consensus       212 ~gk~~LVT----GgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~-l~-------~~~~~~~~~~~~~Dvtd~~~v~~~~~  279 (454)
T 3u0b_A          212 DGKVAVVT----GAARGIGATIAEVFARDGATVVAIDVDGAAED-LK-------RVADKVGGTALTLDVTADDAVDKITA  279 (454)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH-HH-------HHHHHHTCEEEECCTTSTTHHHHHHH
T ss_pred             CCCEEEEe----CCchHHHHHHHHHHHHCCCEEEEEeCCccHHH-HH-------HHHHHcCCeEEEEecCCHHHHHHHHH
Confidence            56899999    99999999999999999999999988642211 00       01112256677777   555555554


Q ss_pred             CC------cccEEEeCCCC--------------------ChhhHHHHHHHHHhC----CCCEEEEecccccccCCCCCCC
Q 015746          150 GV------TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----GVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~------~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~----gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..      ++|+|||+||.                    |+.++.++.+++...    +..+||++||...+....    
T Consensus       280 ~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~----  355 (454)
T 3u0b_A          280 HVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR----  355 (454)
T ss_dssp             HHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT----
T ss_pred             HHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC----
Confidence            22      38999999994                    577888888888765    556999999977653321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|...+            .|++++.|+||.+..+..... ............++         ..
T Consensus       356 --------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~l---------~r  417 (454)
T 3u0b_A          356 --------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGRRLNSL---------FQ  417 (454)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBTT---------SS
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHHhhccc---------cC
Confidence                    1256776664221            389999999999987632210 00000011111111         12


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..++|+|+++..++..... .+|+++++.++.
T Consensus       418 ~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          418 GGQPVDVAELIAYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             CBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred             CCCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence            34789999999998876543 568999998874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.46  E-value=3.8e-13  Score=121.91  Aligned_cols=194  Identities=19%  Similarity=0.231  Sum_probs=130.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++|.+|||    ||++.||+.+++.|+++|++|++.+|+..+.         ....+.  ...+..+.+|   ++++..
T Consensus         7 L~GKvalVT----Gas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~---------~~~~~~~~g~~~~~~~~Dv~d~~~v~~   73 (247)
T 4hp8_A            7 LEGRKALVT----GANTGLGQAIAVGLAAAGAEVVCAARRAPDE---------TLDIIAKDGGNASALLIDFADPLAAKD   73 (247)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHH---------HHHHHHHTTCCEEEEECCTTSTTTTTT
T ss_pred             CCCCEEEEe----CcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH---------HHHHHHHhCCcEEEEEccCCCHHHHHH
Confidence            457999999    9999999999999999999999999875321         011111  1345667777   566666


Q ss_pred             hhcCCcccEEEeCCCC--------------------ChhhH----HHHHHHHHhCC-CCEEEEecccccccCCCCCCCCC
Q 015746          147 VVGGVTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~~g-v~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      +++..++|++||+||.                    |+.++    +.++..+++.+ -.++|.+||...+...       
T Consensus        74 ~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-------  146 (247)
T 4hp8_A           74 SFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-------  146 (247)
T ss_dssp             SSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-------
Confidence            6665679999999994                    34444    44444444444 3589999997765332       


Q ss_pred             CCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          202 GDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                           +....|.+.|..         .|   +|+++..|.||.+..+..... ......+.+....|+..+|        
T Consensus       147 -----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g--------  213 (247)
T 4hp8_A          147 -----IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWG--------  213 (247)
T ss_dssp             -----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCB--------
T ss_pred             -----CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCc--------
Confidence                 112567766632         22   489999999999976532110 0012234455555554444        


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       .++|+|.+++.++.+... ..|+++.+.+|.
T Consensus       214 -~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          214 -HSEDIAGAAVFLSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             -CTHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             -CHHHHHHHHHHHhCchhcCCcCCeEEECccc
Confidence             579999999998876654 568999999873

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.46  E-value=5.3e-13  Score=123.41  Aligned_cols=194  Identities=11%  Similarity=0.068  Sum_probs=123.0

Q ss_pred             ccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .+|+||||    ||  +|+||++++++|+++|++|++++|+.++. ..+..       ++ ..++.++.+|   ++++.+
T Consensus         6 ~~k~vlVT----Ga~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~-~~~~~~~~~Dv~~~~~v~~   73 (269)
T 2h7i_A            6 DGKRILVS----GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RL-PAKAPLLELDVQNEEHLAS   73 (269)
T ss_dssp             TTCEEEEC----CCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TS-SSCCCEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-------hc-CCCceEEEccCCCHHHHHH
Confidence            45789999    99  99999999999999999999999986431 21111       11 1256677777   566666


Q ss_pred             hhcCC--------cccEEEeCCCC-------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccc
Q 015746          147 VVGGV--------TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIY  191 (401)
Q Consensus       147 ~~~~~--------~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy  191 (401)
                      +++..        ++|+|||+||.                         |+.++.++++++...  .-.+||++||...+
T Consensus        74 ~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~  153 (269)
T 2h7i_A           74 LAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR  153 (269)
T ss_dssp             HHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS
T ss_pred             HHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc
Confidence            66532        58999999983                         234455677777543  11489999987653


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCC-------CCc----HHHHHH
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNN-------KDC----EEWFFD  248 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~-------~~~----~~~~~~  248 (401)
                      +..             ....|.+.|...         |   .|++++.|+||.+..+...       ...    ...+.+
T Consensus       154 ~~~-------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (269)
T 2h7i_A          154 AMP-------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  220 (269)
T ss_dssp             CCT-------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             ccC-------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHH
Confidence            221             113455544322         2   3899999999998664100       000    000111


Q ss_pred             HHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+....|+.        +.+..++|+|++++.++.+... ..|+++++.+|.
T Consensus       221 ~~~~~~p~~--------rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          221 GWDQRAPIG--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHHCTTC--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             hhhccCCcc--------cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            121222221        0234679999999999986543 567999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.45  E-value=4.4e-13  Score=123.28  Aligned_cols=196  Identities=16%  Similarity=0.098  Sum_probs=117.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.++...+.       .++.  ..++.++.+|   .+++.+
T Consensus         3 l~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   71 (260)
T 2qq5_A            3 MNGQVCVVT----GASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-------QEAQSLGGQCVPVVCDSSQESEVRS   71 (260)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHSSEEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHHcCCceEEEECCCCCHHHHHH
Confidence            346889999    99999999999999999999999999865432211       1111  1245677777   555555


Q ss_pred             hhcC------CcccEEEeCCCC---------------------------ChhhHH----HHHHHHHhCCCCEEEEecccc
Q 015746          147 VVGG------VTFDVVLDNNGK---------------------------NLDAVR----PVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       147 ~~~~------~~~d~Vv~~a~~---------------------------~~~~~~----~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      +++.      -++|++||+||.                           |+.++.    .++..+++.+..+||++||..
T Consensus        72 ~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  151 (260)
T 2qq5_A           72 LFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPG  151 (260)
T ss_dssp             HHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGG
T ss_pred             HHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChh
Confidence            5432      247999999931                           233343    334444556667999999988


Q ss_pred             cccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcc
Q 015746          190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       190 vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  257 (401)
                      .+....             ...|...|...+            .|+++++|+||.+..+.........   .........
T Consensus       152 ~~~~~~-------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~  215 (260)
T 2qq5_A          152 SLQYMF-------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLK  215 (260)
T ss_dssp             GTSCCS-------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------
T ss_pred             hcCCCC-------------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHH
Confidence            764211             134555543222            3899999999999877422100000   000000000


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc--CCCcEEEec
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNLV  296 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~g~~~~~~  296 (401)
                      ....  ....+..++|+|++++.++.++..  ..|+++.+.
T Consensus       216 ~~~~--~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          216 QFKS--AFSSAETTELSGKCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             --------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             HHHh--hhccCCCHHHHHHHHHHHhcCcccccccceeechh
Confidence            0000  001135789999999999987652  346776643

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.44  E-value=1.8e-13  Score=125.09  Aligned_cols=196  Identities=15%  Similarity=0.144  Sum_probs=128.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.+...+..       .++..  .++..+.+|   ++++++
T Consensus         7 L~gKvalVT----Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-------~~l~~~g~~~~~~~~Dv~~~~~v~~   75 (255)
T 4g81_D            7 LTGKTALVT----GSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-------DTLTRKGYDAHGVAFDVTDELAIEA   75 (255)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-------HHHHHTTCCEEECCCCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEeeCCCHHHHHH
Confidence            357899999    99999999999999999999999999876543211       12221  244555666   555555


Q ss_pred             hhcC----C-cccEEEeCCCC--------------------ChhhH----HHHHHHHHh-CCCCEEEEecccccccCCCC
Q 015746          147 VVGG----V-TFDVVLDNNGK--------------------NLDAV----RPVADWAKS-SGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~----~-~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~-~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++.    . ++|++||+||.                    |+.++    +.++..+++ .+-.++|++||...+.... 
T Consensus        76 ~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~-  154 (255)
T 4g81_D           76 AFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP-  154 (255)
T ss_dssp             HHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT-
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC-
Confidence            4433    2 48999999994                    34444    444444433 3445899999987654321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                 ....|.+.|...         |   +|+++..|.||.+..+...... -..+.+.+....|+..++   
T Consensus       155 -----------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g---  220 (255)
T 4g81_D          155 -----------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWG---  220 (255)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCB---
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCc---
Confidence                       125566666322         2   4899999999999766321100 012233344444544333   


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                            .++|+|.+++.++.+... ..|+++.+.||.
T Consensus       221 ------~pediA~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          221 ------RPEELIGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             ------CGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ------CHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence                  679999999998876554 568999999873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.43  E-value=7.7e-13  Score=133.02  Aligned_cols=198  Identities=16%  Similarity=0.159  Sum_probs=131.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .+++||||    ||+|+||.+++++|+++|+ +|++++|+.........    ...++..  ..+.++.+|   .+++.+
T Consensus       258 ~~~~vLIT----GgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~----l~~~l~~~g~~v~~~~~Dvtd~~~v~~  329 (511)
T 2z5l_A          258 PSGTVLIT----GGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAE----LAEELRGHGCEVVHAACDVAERDALAA  329 (511)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHH----HHHHHHTTTCEEEEEECCSSCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHH----HHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence            46899999    9999999999999999999 58888887643221100    0112222  235667777   777888


Q ss_pred             hhcCCcccEEEeCCCC--------------------ChhhHHHHHHHHHhC-CCCEEEEecccc-cccCCCCCCCCCCCC
Q 015746          147 VVGGVTFDVVLDNNGK--------------------NLDAVRPVADWAKSS-GVKQFLFISSAG-IYKPADEPPHVEGDV  204 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~-vy~~~~~~~~~E~~~  204 (401)
                      +++..++|+|||+||.                    |+.++.++.+++... +.++||++||.. +++...         
T Consensus       330 ~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g---------  400 (511)
T 2z5l_A          330 LVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG---------  400 (511)
T ss_dssp             HHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT---------
T ss_pred             HHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC---------
Confidence            8876457999999994                    467788899988877 778999999975 454321         


Q ss_pred             CCCCCChHHHHHHHHH--------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHH
Q 015746          205 VKPDAGHVQVEKYISE--------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (401)
Q Consensus       205 ~~~~~~~~~~ek~~~e--------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~  276 (401)
                          ...|+..|...+        .|+++++|+||.+.+.+-.....   ...+..      .+     ..+++++|+++
T Consensus       401 ----~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~---~~~~~~------~g-----~~~l~~e~~a~  462 (511)
T 2z5l_A          401 ----QGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAG---EESLSR------RG-----LRAMDPDAAVD  462 (511)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH---HHHHHH------HT-----BCCBCHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccccc---HHHHHh------cC-----CCCCCHHHHHH
Confidence                245665553332        48999999999884332211111   111111      01     34578999999


Q ss_pred             HHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHH
Q 015746          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  312 (401)
Q Consensus       277 ~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~  312 (401)
                      ++..++..+..   .++ +.   .+.+..+...+..
T Consensus       463 ~l~~al~~~~~---~v~-v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          463 ALLGAMGRNDV---CVT-VV---DVDWERFAPATNA  491 (511)
T ss_dssp             HHHHHHHHTCS---EEE-EC---CBCHHHHHHHHHH
T ss_pred             HHHHHHhCCCC---EEE-EE---eCCHHHHHhhhcc
Confidence            99999987654   233 33   2567776665544

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.43  E-value=3.3e-12  Score=119.76  Aligned_cols=208  Identities=10%  Similarity=0.037  Sum_probs=120.3

Q ss_pred             ccCeEEEEecCCCcc--ccchHHHHHHHHhCCCeEEEEecCC-----------CCcccCCCCCCC---cccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGD-----------ENSDKMKKPPFN---RFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~~~r~~-----------~~~~~~~~~~~~---~~~~l~~~~~~~  136 (401)
                      .+|++|||    ||+  |+||++++++|+++|++|++++|+.           ++...+......   .........+.+
T Consensus         7 ~~k~~lVT----Gas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            7 RGKRAFIA----GIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             TTCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CCCEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence            45789999    999  9999999999999999999998642           222111100000   000000000000


Q ss_pred             -----EEcC-----------HhhHHHhhcCC-----cccEEEeCCCC----------------------ChhhHHHHHHH
Q 015746          137 -----VWGD-----------PAEVGNVVGGV-----TFDVVLDNNGK----------------------NLDAVRPVADW  173 (401)
Q Consensus       137 -----~~~D-----------~~~~~~~~~~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~a  173 (401)
                           +..|           .+++.++++..     ++|++||+||.                      |+.++.+++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 1111           22344433321     47999999973                      45667778887


Q ss_pred             HHhC--CCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHH----HHH----hCCCeEEEecCeeecCCCCCC-c
Q 015746          174 AKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY----ISE----NFSNWASFRPQYMIGSGNNKD-C  242 (401)
Q Consensus       174 a~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~----~~e----~g~~~~ilRp~~v~G~~~~~~-~  242 (401)
                      +...  .-.+||++||...+......      ...+..+|.+.+.+    ..|    .|++++.|+||.+.++..... .
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~~~~------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~  236 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERIIPGY------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTTC------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             HHHHhccCceEEEEeccccccCCCCc------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc
Confidence            7654  11589999998765332110      00111233332222    122    589999999999999854321 2


Q ss_pred             HHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ...+...+....++.         .+.+++|+|++++.++..... ..|+++++.++.
T Consensus       237 ~~~~~~~~~~~~p~~---------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          237 IDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cHHHHHHhhccCCCC---------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            223333333333321         235799999999999875433 457999999874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.42  E-value=5.3e-13  Score=125.55  Aligned_cols=192  Identities=15%  Similarity=0.133  Sum_probs=118.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---H-hhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P-AEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~-~~~~~~  147 (401)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.++......    .+......++.++.+|   . +.+..+
T Consensus        10 ~~~k~vlIT----Gas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~~v~~~   81 (311)
T 3o26_A           10 TKRRCAVVT----GGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE----KLKNSNHENVVFHQLDVTDPIATMSSL   81 (311)
T ss_dssp             --CCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred             CCCcEEEEe----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhcCCCceEEEEccCCCcHHHHHHH
Confidence            346889999    999999999999999999999999998765432110    1111112357778887   3 545555


Q ss_pred             hcCC-----cccEEEeCCCC--------------------------------------------------ChhhHHHHHH
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------------------------------------NLDAVRPVAD  172 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------------------------------------~~~~~~~ll~  172 (401)
                      ++..     ++|+|||+||.                                                  |+.++.++++
T Consensus        82 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  161 (311)
T 3o26_A           82 ADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTE  161 (311)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHH
Confidence            4421     47999999994                                                  2334444444


Q ss_pred             H----HHhCCCCEEEEecccccccCCCCC-------------------------------CCCCCCCCCCCCChHHHHHH
Q 015746          173 W----AKSSGVKQFLFISSAGIYKPADEP-------------------------------PHVEGDVVKPDAGHVQVEKY  217 (401)
Q Consensus       173 a----a~~~gv~~~v~~SS~~vy~~~~~~-------------------------------~~~E~~~~~~~~~~~~~ek~  217 (401)
                      +    +++.+..+||++||...+......                               ...+.....+....|.+.|.
T Consensus       162 ~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          162 VLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             HhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            4    455566799999997754321000                               00111111122355776665


Q ss_pred             HHHh----------CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc
Q 015746          218 ISEN----------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       218 ~~e~----------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ..+.          +++++.|+||+|..+....                         ......++.++.++.++..+..
T Consensus       242 a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~~  296 (311)
T 3o26_A          242 CLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG-------------------------IGNYTAEEGAEHVVRIALFPDD  296 (311)
T ss_dssp             HHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT-------------------------CCSBCHHHHHHHHHHHHTCCSS
T ss_pred             HHHHHHHHHHhhcCCceEEEecCCceecCCcCC-------------------------CCCCCHHHHHHHHHHHHhCCCC
Confidence            4431          6889999999986652110                         0113688999999998877655


Q ss_pred             CCCcEEEec
Q 015746          288 ASSNIFNLV  296 (401)
Q Consensus       288 ~~g~~~~~~  296 (401)
                      ..+..|...
T Consensus       297 ~~~g~~~~~  305 (311)
T 3o26_A          297 GPSGFFYDC  305 (311)
T ss_dssp             CCCSCEETC
T ss_pred             CCCceEecc
Confidence            332344433

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.40  E-value=1.9e-13  Score=125.57  Aligned_cols=196  Identities=13%  Similarity=0.076  Sum_probs=118.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHh---CCCeEEEEecCCCCcccCCCCCCCcccchh----cCCCeEEEcC---H
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---P  141 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~  141 (401)
                      .++|++|||    ||+|+||++++++|++   +|++|++++|+.+....+.       .++.    ...+.++.+|   +
T Consensus         4 l~~k~~lVT----Gas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~Dv~~~   72 (259)
T 1oaa_A            4 LGCAVCVLT----GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-------EELGAQQPDLKVVLAAADLGTE   72 (259)
T ss_dssp             CBSEEEEES----SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-------HHHHHHCTTSEEEEEECCTTSH
T ss_pred             CCCcEEEEe----CCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-------HHHHhhCCCCeEEEEecCCCCH
Confidence            456889999    9999999999999999   8999999999875433211       1111    1246677777   5


Q ss_pred             hhHHHhhcCC-------ccc--EEEeCCCC-----------------------ChhhHHHHHHHHHhC------CCCEEE
Q 015746          142 AEVGNVVGGV-------TFD--VVLDNNGK-----------------------NLDAVRPVADWAKSS------GVKQFL  183 (401)
Q Consensus       142 ~~~~~~~~~~-------~~d--~Vv~~a~~-----------------------~~~~~~~ll~aa~~~------gv~~~v  183 (401)
                      +++.++++..       ++|  +|||+||.                       |+.++.++++++...      +..+||
T Consensus        73 ~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv  152 (259)
T 1oaa_A           73 AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVV  152 (259)
T ss_dssp             HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEE
T ss_pred             HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEE
Confidence            5555554321       367  99999984                       233455666666432      335799


Q ss_pred             EecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH---------h-CCCeEEEecCeeecCCCCCCcHHHHHHHHHcC
Q 015746          184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK  253 (401)
Q Consensus       184 ~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e---------~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  253 (401)
                      ++||...+...            +....|.+.|...+         . +++++.|+||.+..+.     ...+... ...
T Consensus       153 ~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~-----~~~~~~~-~~~  214 (259)
T 1oaa_A          153 NISSLCALQPY------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM-----QQLARET-SKD  214 (259)
T ss_dssp             EECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH-----HHHHHHH-CSC
T ss_pred             EEcCchhcCCC------------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch-----HHHHhhc-cCC
Confidence            99998876432            11245666553332         2 4778888998875431     1111000 000


Q ss_pred             CC-cccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEec
Q 015746          254 RP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (401)
Q Consensus       254 ~~-~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~  296 (401)
                      .. ...+........+.+++|+|++++.++.+.....|+++++.
T Consensus       215 ~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~vd  258 (259)
T 1oaa_A          215 PELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred             hhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEecc
Confidence            00 00000000012356899999999999976444556777764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.40  E-value=5.9e-13  Score=126.22  Aligned_cols=191  Identities=16%  Similarity=0.175  Sum_probs=116.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC--CCcccchhcCC--CeEEEcCHhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--FNRFNEIVSAG--GKTVWGDPAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~l~~~~--~~~~~~D~~~~~~~  147 (401)
                      ..+|+||||    ||+|+||++++++|+++|++|++.+|.......-+...  .....++...+  +.....|.+++.++
T Consensus         7 l~gk~~lVT----Gas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~   82 (319)
T 1gz6_A            7 FDGRVVLVT----GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKL   82 (319)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHH
Confidence            346899999    99999999999999999999999876431100000000  00011121111  22333455555444


Q ss_pred             hcC----C-cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccc-cccCCCCC
Q 015746          148 VGG----V-TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAG-IYKPADEP  197 (401)
Q Consensus       148 ~~~----~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~-vy~~~~~~  197 (401)
                      ++.    . ++|+|||+||.                    |+.++.++++++    ++.+..+||++||.. .++..   
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~---  159 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF---  159 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC---
Confidence            332    2 47999999994                    345555555544    555667999999965 45432   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                                ....|...|...+            .|+++++|+||.+ .+.... .           .+       ...
T Consensus       160 ----------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~-~-----------~~-------~~~  209 (319)
T 1gz6_A          160 ----------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET-V-----------MP-------EDL  209 (319)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG-G-----------SC-------HHH
T ss_pred             ----------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc-c-----------CC-------hhh
Confidence                      1245655553322            3889999999986 321100 0           00       011


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      ..+++++|+|.+++.++..+....|++|++.++.
T Consensus       210 ~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~  243 (319)
T 1gz6_A          210 VEALKPEYVAPLVLWLCHESCEENGGLFEVGAGW  243 (319)
T ss_dssp             HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred             hccCCHHHHHHHHHHHhCchhhcCCCEEEECCCe
Confidence            2345889999999999987655567999998874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.35  E-value=2.2e-12  Score=122.69  Aligned_cols=144  Identities=17%  Similarity=0.072  Sum_probs=99.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-----cCCCeEEEcC---HhhHH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-----SAGGKTVWGD---PAEVG  145 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~D---~~~~~  145 (401)
                      +++||||    ||+|+||++++++|+++|++|+++.|+..+......    ....+.     ..++.++.+|   .+++.
T Consensus         2 ~k~vlVT----Gas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   73 (327)
T 1jtv_A            2 RTVVLIT----GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR----LWEAARALACPPGSLETLQLDVRDSKSVA   73 (327)
T ss_dssp             CEEEEES----CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHH----HHHHHHHTTCCTTSEEEEECCTTCHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHH----HHHHhhhccCCCCceEEEEecCCCHHHHH
Confidence            4689999    999999999999999999999998887654432110    011110     1356777787   66777


Q ss_pred             HhhcCC---cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          146 NVVGGV---TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       146 ~~~~~~---~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++++..   ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+....   
T Consensus        74 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~---  150 (327)
T 1jtv_A           74 AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP---  150 (327)
T ss_dssp             HHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT---
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC---
Confidence            777653   48999999984                    455666666664    555667999999987764321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCC
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~  237 (401)
                               ....|...|...+            .|+++++|+||.|..+.
T Consensus       151 ---------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          151 ---------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence                     1245555553322            38999999999998763

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.33  E-value=4.9e-13  Score=127.23  Aligned_cols=168  Identities=10%  Similarity=0.059  Sum_probs=105.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCCC--CcccCCCCCCCcccchhcCCCeEE--EcCHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTV--WGDPA  142 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~l~~~~~~~~--~~D~~  142 (401)
                      +|||+||    ||+||||++++..|+++|+       +|+++++...  +...       ...++....+.++  ..+.+
T Consensus         4 ~mkVlVt----GaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g-------~~~dl~~~~~~~~~di~~~~   72 (327)
T 1y7t_A            4 PVRVAVT----GAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEG-------VVMELEDCAFPLLAGLEATD   72 (327)
T ss_dssp             CEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHH-------HHHHHHTTTCTTEEEEEEES
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccc-------hhhhhhcccccccCCeEecc
Confidence            4689999    9999999999999999996       8999987641  1110       0011111111111  11245


Q ss_pred             hHHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCC-CC-EEEEecccc-cccC--CCCC-CCCCC
Q 015746          143 EVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFISSAG-IYKP--ADEP-PHVEG  202 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~g-v~-~~v~~SS~~-vy~~--~~~~-~~~E~  202 (401)
                      ++.++++++  |+|||+|+.              |+.++.++++++++.+ .+ +|+++|+.. +...  .+.. ++...
T Consensus        73 ~~~~a~~~~--D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~  150 (327)
T 1y7t_A           73 DPKVAFKDA--DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPR  150 (327)
T ss_dssp             CHHHHTTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGG
T ss_pred             ChHHHhCCC--CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChh
Confidence            677778775  999999994              6788999999999986 65 788877643 1110  0000 11111


Q ss_pred             CCCCCCCChHHHHHHHH----HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcc
Q 015746          203 DVVKPDAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~----e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  257 (401)
                      ..  +..+|...|+++.    .+|++.+++|+.+|||++... .++.+......|.++.
T Consensus       151 ~~--yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~-~~~~~~~~~~~g~~l~  206 (327)
T 1y7t_A          151 NF--TAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSST-MFPDLFHAEVDGRPAL  206 (327)
T ss_dssp             GE--EECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTT-CEEECSSCEETTEEGG
T ss_pred             he--eccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCe-EEEEeeeeeeCCeeHH
Confidence            11  2347777776543    359999999999999997643 3333333334455543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.28  E-value=1.5e-11  Score=126.66  Aligned_cols=192  Identities=13%  Similarity=0.083  Sum_probs=113.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCC-CCC-CCcccchhcCC--CeEEEcCHhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-KPP-FNRFNEIVSAG--GKTVWGDPAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~-~~~-~~~~~~l~~~~--~~~~~~D~~~~~~~  147 (401)
                      ..++.||||    ||+|.||++++++|+++|++|++++|+......-. ... .....++...+  +.....|.+++.++
T Consensus        17 l~gk~~lVT----Gas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~   92 (613)
T 3oml_A           17 YDGRVAVVT----GAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKV   92 (613)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHH
Confidence            457899999    99999999999999999999999988321110000 000 00111222222  22333456667776


Q ss_pred             hcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa----~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+....   
T Consensus        93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~---  169 (613)
T 3oml_A           93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF---  169 (613)
T ss_dssp             HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT---
T ss_pred             HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC---
Confidence            6643     48999999994                    455655666655    666667999999976543221   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|++.|...+            .|+.+..|.||.+- +             +..+..      .....
T Consensus       170 ---------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~-------------~~~~~~------~~~~~  220 (613)
T 3oml_A          170 ---------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-R-------------MTEGIL------PDILF  220 (613)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------CCCC------CHHHH
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-h-------------hhhhcc------chhhh
Confidence                     1255666663322            37899999998641 1             111100      00112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      ..+.++|+|.+++.++......+|+++++.+|.
T Consensus       221 ~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~  253 (613)
T 3oml_A          221 NELKPKLIAPVVAYLCHESCEDNGSYIESAAGW  253 (613)
T ss_dssp             TTCCGGGTHHHHHHTTSTTCCCCSCEEEEETTE
T ss_pred             hcCCHHHHHHHHHHhcCCCcCCCceEEEECCCe
Confidence            234789999999999988755668999999874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.24  E-value=1e-10  Score=110.49  Aligned_cols=199  Identities=13%  Similarity=0.063  Sum_probs=115.2

Q ss_pred             ccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCC-----------CCcccCCCCCCCcccchhcCCCeEEEc
Q 015746           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD-----------ENSDKMKKPPFNRFNEIVSAGGKTVWG  139 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~  139 (401)
                      .+|++|||    ||  +|+||++++++|+++|++|++++|++           .+...+........    ...+.++..
T Consensus         8 ~gk~~lVT----Ga~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   79 (315)
T 2o2s_A            8 RGQTAFVA----GVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSL----IEFAGVYPL   79 (315)
T ss_dssp             TTCEEEEE----CCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCB----CCCSCEEEC
T ss_pred             CCCEEEEe----CCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccc----ccccccccc
Confidence            46789999    99  89999999999999999999998642           11111000000000    000122222


Q ss_pred             C-----------------------HhhHHHhhcCC-----cccEEEeCCCC----------------------ChhhHHH
Q 015746          140 D-----------------------PAEVGNVVGGV-----TFDVVLDNNGK----------------------NLDAVRP  169 (401)
Q Consensus       140 D-----------------------~~~~~~~~~~~-----~~d~Vv~~a~~----------------------~~~~~~~  169 (401)
                      |                       .+++.++++..     ++|++||+||.                      |+.++.+
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence            1                       22344444321     48999999973                      3556667


Q ss_pred             HHHHHHhC--CCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHH-----H----HH----hCCCeEEEecCeee
Q 015746          170 VADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-----I----SE----NFSNWASFRPQYMI  234 (401)
Q Consensus       170 ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~-----~----~e----~g~~~~ilRp~~v~  234 (401)
                      +++++...  .-.+||++||...+......           ...|.+.|.     .    .|    .|++++.|+||.|.
T Consensus       160 l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-----------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  228 (315)
T 2o2s_A          160 LLQHFGPIMNEGGSAVTLSYLAAERVVPGY-----------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK  228 (315)
T ss_dssp             HHHHHSTTEEEEEEEEEEEEGGGTSCCTTC-----------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred             HHHHHHHHHhcCCEEEEEecccccccCCCc-----------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence            77777543  11589999998765432110           023444442     1    22    58999999999986


Q ss_pred             cCCC-------CCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          235 GSGN-------NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       235 G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .+..       ...+...+...+....++         ..+..++|+|++++.++..... .+|+++.+.+|.
T Consensus       229 T~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          229 SRAASAIGKSGEKSFIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             CHHHHHTTCSSSSCHHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             chhhhhccccccchhHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            5410       000111111111111221         1234789999999999875443 567999999875

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.24  E-value=7.3e-11  Score=117.92  Aligned_cols=181  Identities=17%  Similarity=0.158  Sum_probs=122.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~~  147 (401)
                      ++++|||    ||+|.||.+++++|+++|+ +|+++.|+.........    ...++..  ..+.++.+|   .+++.++
T Consensus       239 ~~~vLIT----GgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~----l~~~l~~~g~~v~~~~~Dvtd~~~v~~~  310 (496)
T 3mje_A          239 HGSVLVT----GGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAE----LRAELEQLGVRVTIAACDAADREALAAL  310 (496)
T ss_dssp             CSEEEEE----TCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEE----CCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHH----HHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            4899999    9999999999999999999 78888886533221100    0112222  346677777   6777777


Q ss_pred             hcCC----cccEEEeCCCC---------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCC
Q 015746          148 VGGV----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       148 ~~~~----~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      ++..    ++|+|||+||.                     |+.++.++.++++..+.++||++||...+-..        
T Consensus       311 ~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~--------  382 (496)
T 3mje_A          311 LAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS--------  382 (496)
T ss_dssp             HHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC--------
T ss_pred             HHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC--------
Confidence            7643    58999999983                     67889999999999888899999997644222        


Q ss_pred             CCCCCCCChHHHHHHHH--------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          203 DVVKPDAGHVQVEKYIS--------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~--------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                          +....|.+.|...        ..|++++.|.||.+.+.+-...  ......+.+.      |     ...+..++.
T Consensus       383 ----~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~~------g-----~~~l~pe~~  445 (496)
T 3mje_A          383 ----GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVRQ------G-----VLAMEPEHA  445 (496)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHHT------T-----EEEECHHHH
T ss_pred             ----CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHhc------C-----CCCCCHHHH
Confidence                1125666665332        3499999999999876542211  0111112111      1     334688999


Q ss_pred             HHHHHHHhcCCCc
Q 015746          275 SSMLTLAVENPEA  287 (401)
Q Consensus       275 a~~~~~~~~~~~~  287 (401)
                      ++++..++..+..
T Consensus       446 ~~~l~~~l~~~~~  458 (496)
T 3mje_A          446 LGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHTCS
T ss_pred             HHHHHHHHcCCCc
Confidence            9999999987654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.18  E-value=6.7e-11  Score=112.00  Aligned_cols=212  Identities=10%  Similarity=0.016  Sum_probs=106.9

Q ss_pred             ccCeEEEEecCCCc--cccchHHHHHHHHhCCCeEEEEecCC-----------CCcccCCCC--CC--CcccchhcCC--
Q 015746           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD-----------ENSDKMKKP--PF--NRFNEIVSAG--  133 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~~~r~~-----------~~~~~~~~~--~~--~~~~~l~~~~--  133 (401)
                      .++++|||    ||  +|+||++++++|+++|++|++++|++           ++.......  ..  ....++...+  
T Consensus         8 ~~k~~lVT----Ga~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            8 RGKTAFVA----GVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             TTCEEEEE----CCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             CCCEEEEe----CCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            45789999    99  89999999999999999999998642           111110000  00  0000110000  


Q ss_pred             ---CeEEEcC-----------------------HhhHHHhhcCC-----cccEEEeCCCC--------------------
Q 015746          134 ---GKTVWGD-----------------------PAEVGNVVGGV-----TFDVVLDNNGK--------------------  162 (401)
Q Consensus       134 ---~~~~~~D-----------------------~~~~~~~~~~~-----~~d~Vv~~a~~--------------------  162 (401)
                         ..++..|                       .+++.++++..     ++|++||+||.                    
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence               2333222                       12344444321     48999999862                    


Q ss_pred             --ChhhHHHHHHHHHhC---CCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHH----H----HhCCCeEEEe
Q 015746          163 --NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI----S----ENFSNWASFR  229 (401)
Q Consensus       163 --~~~~~~~ll~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~----~----e~g~~~~ilR  229 (401)
                        |+.++.++++++...   + .+||++||...+......      ...+..+|.+.+.+.    .    ..|++++.|+
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~-g~Iv~isS~~~~~~~~~~------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~  236 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEG-GSALALSYIASEKVIPGY------GGGMSSAKAALESDCRTLAFEAGRARAVRVNCIS  236 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEE-EEEEEEEECC------------------------THHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             hHhhHHHHHHHHHHHHHHhcC-ceEEEEeccccccccCcc------chhhHHHHHHHHHHHHHHHHHhccccCeeEEEEe
Confidence              456667777777654   2 589999997765332110      011233554433222    2    2589999999


Q ss_pred             cCeeecCCCCCCc---HHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          230 PQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       230 p~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ||.+..+......   ...+......     .+........+..++|+|++++.++..... .+|+++.+.+|..
T Consensus       237 PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          237 AGPLKSRAASAIGKAGDKTFIDLAID-----YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ECCCC------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             eCCccChhhhhcccccchhhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            9998776321100   0000000000     000001112345899999999999976443 5679999998853

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.17  E-value=7.9e-11  Score=112.03  Aligned_cols=200  Identities=8%  Similarity=0.021  Sum_probs=117.1

Q ss_pred             cCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCC---------CCcccCCCCCCCcccchhcCCCeEEEcC--
Q 015746           74 KKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVSAGGKTVWGD--  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~D--  140 (401)
                      +|.+|||    ||++  .||.+++++|+++|++|++.+|++         ++.........  ........+.++.+|  
T Consensus         2 ~k~~lIT----Gas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dv~   75 (329)
T 3lt0_A            2 EDICFIA----GIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMII--DKDKKMNILDMLPFDAS   75 (329)
T ss_dssp             CCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBC--SSSCBCCEEEEEECCTT
T ss_pred             CcEEEEE----CCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHH--hhccccccccccccccc
Confidence            5789999    9875  999999999999999999776553         22211110000  000000123444444  


Q ss_pred             -H--h------------------hHHHhhcCC-----cccEEEeCCCC----------------------ChhhHHHHHH
Q 015746          141 -P--A------------------EVGNVVGGV-----TFDVVLDNNGK----------------------NLDAVRPVAD  172 (401)
Q Consensus       141 -~--~------------------~~~~~~~~~-----~~d~Vv~~a~~----------------------~~~~~~~ll~  172 (401)
                       .  +                  ++.++++..     ++|++||+||.                      |+.++..+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  155 (329)
T 3lt0_A           76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             1  3                  555544332     48999999983                      3556666666


Q ss_pred             HHHhCC--CCEEEEecccccccCCCCCCCCCCCCCCCCCC-hHHHHHHH------------HH-hCCCeEEEecCeeecC
Q 015746          173 WAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAG-HVQVEKYI------------SE-NFSNWASFRPQYMIGS  236 (401)
Q Consensus       173 aa~~~g--v~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~-~~~~ek~~------------~e-~g~~~~ilRp~~v~G~  236 (401)
                      ++...=  -.++|++||...+.....            .. .|.+.|..            .. .|+++..|.||.|..+
T Consensus       156 ~~~p~m~~~g~Iv~isS~~~~~~~~~------------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          156 YFVNIMKPQSSIISLTYHASQKVVPG------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTT------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             HHHHHHhhCCeEEEEeCccccCCCCc------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            665431  148999999876533211            12 45544421            23 5899999999998754


Q ss_pred             CCCC--------------------------------------------CcHHHHHHHHHcCCCcccCCCCcceeeeeeHH
Q 015746          237 GNNK--------------------------------------------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (401)
Q Consensus       237 ~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  272 (401)
                      ....                                            .+...+...+....+..         .+..++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---------r~~~pe  294 (329)
T 3lt0_A          224 AATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLR---------QKLLST  294 (329)
T ss_dssp             HHHTCC------------------------------------------CHHHHHHHHHHHHSSSC---------SCCCHH
T ss_pred             hHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCccc---------CcCCHH
Confidence            1100                                            00000111122222221         234789


Q ss_pred             HHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       273 D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      |+|++++.++..... .+|+++.+.+|..
T Consensus       295 evA~~v~fL~s~~a~~itG~~i~vdGG~~  323 (329)
T 3lt0_A          295 DIGSVASFLLSRESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhCchhccccCcEEEEcCCee
Confidence            999999999975543 5689999998864

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.12  E-value=5.3e-10  Score=112.81  Aligned_cols=197  Identities=15%  Similarity=0.118  Sum_probs=126.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEE-ecCCCC----------cccCCCCCCCcccchh--cCCCeEEE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIM-TVGDEN----------SDKMKKPPFNRFNEIV--SAGGKTVW  138 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~-~r~~~~----------~~~~~~~~~~~~~~l~--~~~~~~~~  138 (401)
                      .++.+|||    ||+|.||.+++++|+++|++ |+++ +|+...          .....    ....++.  ...+.++.
T Consensus       250 ~~~~vLIT----GgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~----~~~~~l~~~g~~v~~~~  321 (525)
T 3qp9_A          250 ADGTVLVT----GAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLA----GLVAELADLGATATVVT  321 (525)
T ss_dssp             TTSEEEES----STTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CH----HHHHHHHHHTCEEEEEE
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHH----HHHHHHHhcCCEEEEEE
Confidence            46789999    99999999999999999998 5555 676432          11100    0111222  23467777


Q ss_pred             cC---HhhHHHhhcCC----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCC-----CCEEEEec
Q 015746          139 GD---PAEVGNVVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG-----VKQFLFIS  186 (401)
Q Consensus       139 ~D---~~~~~~~~~~~----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~g-----v~~~v~~S  186 (401)
                      +|   .+++.++++..    ++|+|||+||.                    |+.++.++.+++....     ..+||++|
T Consensus       322 ~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~S  401 (525)
T 3qp9_A          322 CDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFS  401 (525)
T ss_dssp             CCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEEC
Confidence            77   67777777653    48999999994                    5778889999888765     67999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH--------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCccc
Q 015746          187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI  258 (401)
Q Consensus       187 S~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e--------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  258 (401)
                      |...+-..            +....|++.|...+        .|++++.|.||.+-+.....   ......+.+.     
T Consensus       402 S~a~~~g~------------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~---~~~~~~~~~~-----  461 (525)
T 3qp9_A          402 SVAAIWGG------------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTE---GATGERLRRL-----  461 (525)
T ss_dssp             EGGGTTCC------------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGS---SHHHHHHHHT-----
T ss_pred             CHHHcCCC------------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccc---hhhHHHHHhc-----
Confidence            97754322            12366777775544        28899999999982211100   0111112111     


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHH
Q 015746          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC  310 (401)
Q Consensus       259 ~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i  310 (401)
                       |     ...+..+++++++..++..+..   .+. +.   .+.+..+...+
T Consensus       462 -g-----~~~l~pee~a~~l~~~l~~~~~---~v~-v~---~~dw~~~~~~~  500 (525)
T 3qp9_A          462 -G-----LRPLAPATALTALDTALGHGDT---AVT-IA---DVDWSSFAPGF  500 (525)
T ss_dssp             -T-----BCCBCHHHHHHHHHHHHHHTCS---EEE-EC---CBCHHHHHHHH
T ss_pred             -C-----CCCCCHHHHHHHHHHHHhCCCC---eEE-EE---eCCHHHHHhhc
Confidence             1     2346899999999999987654   333 22   25565555544

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.01  E-value=7.6e-10  Score=88.20  Aligned_cols=95  Identities=24%  Similarity=0.256  Sum_probs=75.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|+|+|+    |+ |++|+.+++.|+++| ++|++++|++++...           +...++.++.+|   .+++.+++
T Consensus         4 ~~~~v~I~----G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~~~   67 (118)
T 3ic5_A            4 MRWNICVV----GA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV-----------LNRMGVATKQVDAKDEAGLAKAL   67 (118)
T ss_dssp             TCEEEEEE----CC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH-----------HHTTTCEEEECCTTCHHHHHHHT
T ss_pred             CcCeEEEE----CC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH-----------HHhCCCcEEEecCCCHHHHHHHH
Confidence            46799999    99 999999999999999 999999998754432           223466677776   56777787


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .+  +|+|||+++  .....+++++|.+.|+++|.+.++
T Consensus        68 ~~--~d~vi~~~~--~~~~~~~~~~~~~~g~~~~~~~~~  102 (118)
T 3ic5_A           68 GG--FDAVISAAP--FFLTPIIAKAAKAAGAHYFDLTED  102 (118)
T ss_dssp             TT--CSEEEECSC--GGGHHHHHHHHHHTTCEEECCCSC
T ss_pred             cC--CCEEEECCC--chhhHHHHHHHHHhCCCEEEecCc
Confidence            76  499999996  456789999999999976654443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.01  E-value=3.7e-09  Score=108.40  Aligned_cols=182  Identities=19%  Similarity=0.184  Sum_probs=113.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcCH-hhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGDP-AEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D~-~~~~~~~  148 (401)
                      .+++.+|||    ||++.||+.++++|+++|++|++.+|..  .+.       ...++..  ..+..+.+|. ++..+++
T Consensus       320 l~gkvalVT----Gas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~-------~~~~i~~~g~~~~~~~~Dv~~~~~~~~  386 (604)
T 2et6_A          320 LKDKVVLIT----GAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATK-------TVDEIKAAGGEAWPDQHDVAKDSEAII  386 (604)
T ss_dssp             CTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEECSSC--CHH-------HHHHHHHTTCEEEEECCCHHHHHHHHH
T ss_pred             cCCCeEEEE----CcchHHHHHHHHHHHHCCCEEEEEeCcc--HHH-------HHHHHHhcCCeEEEEEcChHHHHHHHH
Confidence            456889999    9999999999999999999999987632  111       0112211  1244566676 5544443


Q ss_pred             cCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||+                    |+.+    ++.++..+++.+-.++|++||...+...     
T Consensus       387 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-----  461 (604)
T 2et6_A          387 KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-----  461 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-----
Confidence            321     47999999994                    3334    4455555555555689999997654221     


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                             +....|.+.|...         |   +|+++..|.||. ..+     +..    ......          ...
T Consensus       462 -------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~-----m~~----~~~~~~----------~~~  514 (604)
T 2et6_A          462 -------FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA-----MTL----SIMREQ----------DKN  514 (604)
T ss_dssp             -------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC-----C-----------------------CC
T ss_pred             -------CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc-----ccc----ccCchh----------hcc
Confidence                   1124566666322         2   489999999983 211     111    110000          012


Q ss_pred             eeeHHHHHHHHHHHhcCCCcCCCcEEEecCC
Q 015746          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~  298 (401)
                      ....+|+|.+++.++.......|+++.+.+|
T Consensus       515 ~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG  545 (604)
T 2et6_A          515 LYHADQVAPLLVYLGTDDVPVTGETFEIGGG  545 (604)
T ss_dssp             SSCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             CCCHHHHHHHHHHHhCCccCCCCcEEEECCC
Confidence            3478999999999887655466789988876

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.94  E-value=4.2e-09  Score=108.04  Aligned_cols=202  Identities=16%  Similarity=0.217  Sum_probs=123.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC---------CcccCCCCCCCcccchhcCC--CeEEEcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE---------NSDKMKKPPFNRFNEIVSAG--GKTVWGD  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~~l~~~~--~~~~~~D  140 (401)
                      .+++.+|||    ||++.||+.++++|+++|++|++.+|+..         ..+.       ...++...+  +.....|
T Consensus         6 l~gkvalVT----Gas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~-------~~~~i~~~g~~~~~d~~d   74 (604)
T 2et6_A            6 FKDKVVIIT----GAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADV-------VVDEIVKNGGVAVADYNN   74 (604)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHH-------HHHHHHHTTCEEEEECCC
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHH-------HHHHHHhcCCeEEEEcCC
Confidence            346889999    99999999999999999999999887641         1111       011222112  2234445


Q ss_pred             HhhHHHhh----cCC-cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccc
Q 015746          141 PAEVGNVV----GGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIY  191 (401)
Q Consensus       141 ~~~~~~~~----~~~-~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy  191 (401)
                      .++..+++    +.. ++|++||+||+                    |+.+    ++.++..+++.+-.++|++||...+
T Consensus        75 ~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~  154 (604)
T 2et6_A           75 VLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL  154 (604)
T ss_dssp             TTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            43333332    221 47999999994                    3334    4455555555555689999997643


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccC
Q 015746          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       192 ~~~~~~~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  259 (401)
                      ....            ....|.+.|...            .+|+++..|.|+. .     ..    +....   .+..  
T Consensus       155 ~~~~------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~-----T~----m~~~~---~~~~--  207 (604)
T 2et6_A          155 YGNF------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-R-----SR----MTESI---MPPP--  207 (604)
T ss_dssp             HCCT------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-C-----CH----HHHTT---SCHH--
T ss_pred             CCCC------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-c-----Cc----ccccc---CChh--
Confidence            2211            124566666322            2489999999962 1     11    11110   0000  


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC------------------CCCCHHHHHHHHHHHhCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD------------------RAVTLDGMAKLCAQAAGL  316 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~------------------~~~t~~el~~~i~~~~g~  316 (401)
                           ......++|+|.+++.++.......|+++.+.+|                  ..++..++.+.+.++...
T Consensus       208 -----~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          208 -----MLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             -----HHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             -----hhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence                 0112478999999999998775556788887765                  346788999888877543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.75  E-value=5.3e-08  Score=102.88  Aligned_cols=182  Identities=15%  Similarity=0.155  Sum_probs=118.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHH-hCCC-eEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~  145 (401)
                      .++.+|||    ||+|.||+.++++|. ++|+ +|++++|+..+......    ...++..  ..+.++.+|   .+++.
T Consensus       529 ~~~~~lIt----Gg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~----~~~~l~~~G~~v~~~~~Dvsd~~~v~  600 (795)
T 3slk_A          529 AAGTVLVT----GGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAE----LVAQLTAYGAEVSLQACDVADRETLA  600 (795)
T ss_dssp             TTSEEEEE----TTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             cccceeec----cCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHH----HHHHHHhcCCcEEEEEeecCCHHHHH
Confidence            46789999    999999999999999 7898 58888998543322110    1122322  246677777   66777


Q ss_pred             HhhcCC----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          146 NVVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       146 ~~~~~~----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      ++++..    ++|+|||+||.                    |+.++.++.+++. ... +||++||...+-..       
T Consensus       601 ~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g~-------  671 (795)
T 3slk_A          601 KVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLGS-------  671 (795)
T ss_dssp             HHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHTC-------
T ss_pred             HHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCCC-------
Confidence            776554    58999999994                    6788889988873 234 89999997754322       


Q ss_pred             CCCCCCCCChHHHHHHHHH--------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          202 GDVVKPDAGHVQVEKYISE--------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e--------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                           +....|.+.|...+        .|++++.|.||.+-..+-...........+.+..           ...+..++
T Consensus       672 -----~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g-----------~~~l~~~e  735 (795)
T 3slk_A          672 -----GGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSG-----------LLPISTEE  735 (795)
T ss_dssp             -----SSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTT-----------BCCCCHHH
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcC-----------CCCCCHHH
Confidence                 12366777664333        4999999999988654311000011111121111           22356788


Q ss_pred             HHHHHHHHhcCCCc
Q 015746          274 LSSMLTLAVENPEA  287 (401)
Q Consensus       274 ~a~~~~~~~~~~~~  287 (401)
                      ....+..++..+..
T Consensus       736 ~~~~~~~~l~~~~~  749 (795)
T 3slk_A          736 GLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHhCCCc
Confidence            88888888877654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.64  E-value=1.2e-07  Score=106.10  Aligned_cols=203  Identities=13%  Similarity=0.024  Sum_probs=117.2

Q ss_pred             cccCeEEEEecCCCcccc-chHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcc-cchh--cCCCeEEEcC---Hhh
Q 015746           72 AEKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRF-NEIV--SAGGKTVWGD---PAE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~-~~l~--~~~~~~~~~D---~~~  143 (401)
                      ..++.||||    ||+|. ||.+++++|+++|++|++++ |+.+.......    .+ .++.  ...+.++.+|   .++
T Consensus       673 l~gKvaLVT----GASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~----eL~~~~~~~g~~v~~v~~DVsd~~s  744 (1887)
T 2uv8_A          673 FKDKYVLIT----GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQ----SIYAKYGAKGSTLIVVPFNQGSKQD  744 (1887)
T ss_dssp             CTTCEEEEE----SCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH----HHHHHHCCTTCEEEEEECCTTCHHH
T ss_pred             CCCCEEEEE----CCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHH----HHHHHhhcCCCeEEEEEecCCCHHH
Confidence            446789999    99999 99999999999999999984 55433221100    00 0111  1245667777   555


Q ss_pred             HHHhhc----C-----C--cccEEEeCCCCC-----------------------hhhHHHHHHHHHhCC------CCEEE
Q 015746          144 VGNVVG----G-----V--TFDVVLDNNGKN-----------------------LDAVRPVADWAKSSG------VKQFL  183 (401)
Q Consensus       144 ~~~~~~----~-----~--~~d~Vv~~a~~~-----------------------~~~~~~ll~aa~~~g------v~~~v  183 (401)
                      +.++++    .     .  ++|+|||+||..                       +.++.+++++++...      -.+||
T Consensus       745 V~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IV  824 (1887)
T 2uv8_A          745 VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL  824 (1887)
T ss_dssp             HHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEE
T ss_pred             HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEE
Confidence            555442    2     2  489999999842                       233345556553221      24899


Q ss_pred             EecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH----------h--CCCeEEEecCeeec-CCCC-CCcHHHHHHH
Q 015746          184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------N--FSNWASFRPQYMIG-SGNN-KDCEEWFFDR  249 (401)
Q Consensus       184 ~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e----------~--g~~~~ilRp~~v~G-~~~~-~~~~~~~~~~  249 (401)
                      ++||...+...              ...|++.|...+          .  .++++.|.||++.+ +... ...    ...
T Consensus       825 nISS~ag~~gg--------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~----~~~  886 (1887)
T 2uv8_A          825 PMSPNHGTFGG--------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNI----IAE  886 (1887)
T ss_dssp             EECSCTTCSSC--------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCT----THH
T ss_pred             EEcChHhccCC--------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchh----HHH
Confidence            99997654220              134555553222          1  27788999999984 2111 011    111


Q ss_pred             HHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC-C-cCCCcEEEec--CCC--CCCHHHHHHHH
Q 015746          250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLV--SDR--AVTLDGMAKLC  310 (401)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~-~-~~~g~~~~~~--~~~--~~t~~el~~~i  310 (401)
                      .....++          .+..++|+|.+++.++... . ...|+++++.  +|.  ...+.++...+
T Consensus       887 ~~~~~pl----------r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~l  943 (1887)
T 2uv8_A          887 GIEKMGV----------RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL  943 (1887)
T ss_dssp             HHHTTSC----------CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHH
T ss_pred             HHHhcCC----------CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHH
Confidence            1111111          2347999999999988765 1 2235777663  543  23555555433

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.62  E-value=1.4e-07  Score=77.55  Aligned_cols=97  Identities=21%  Similarity=0.286  Sum_probs=71.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-h
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-V  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~  148 (401)
                      ++++|+|+    |+ |.+|+.+++.|.+.|++|++++|+.+....+.           ..+..++.+|   .+.+.++ +
T Consensus         5 ~~~~v~I~----G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-----------~~~~~~~~~d~~~~~~l~~~~~   68 (144)
T 2hmt_A            5 KNKQFAVI----GL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-----------SYATHAVIANATEENELLSLGI   68 (144)
T ss_dssp             -CCSEEEE----CC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-----------TTCSEEEECCTTCHHHHHTTTG
T ss_pred             cCCcEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HhCCEEEEeCCCCHHHHHhcCC
Confidence            35789999    97 99999999999999999999999775443221           1244566666   3444443 3


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .+  +|+||++.+.+......++..+++.+++++|..++
T Consensus        69 ~~--~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           69 RN--FEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             GG--CSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CC--CCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence            43  59999999876566667888899999887776654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.61  E-value=5.5e-08  Score=105.67  Aligned_cols=207  Identities=14%  Similarity=0.064  Sum_probs=115.5

Q ss_pred             cccCeEEEEecCCCcccc-chHHHHHHHHhCCCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      ..++.||||    ||+|. ||.+++++|+++|++|+++ .|+.++.......-...+.. ....+.++.+|   .+++.+
T Consensus       474 L~GKvALVT----GASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a-~Ga~V~vV~~DVTD~esVea  548 (1688)
T 2pff_A          474 FKDKYVLIT----GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-KGSTLIVVPFNQGSKQDVEA  548 (1688)
T ss_dssp             CCSCCEEEC----SCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCC-TTCEEEEEECCSSSTTHHHH
T ss_pred             cCCCEEEEE----CCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhc-CCCeEEEEEeCCCCHHHHHH
Confidence            345789999    99998 9999999999999999998 46554433211000000000 01235667777   555555


Q ss_pred             hhc----C-----C--cccEEEeCCCC-----------------------ChhhHHHHHHHHHhC------CCCEEEEec
Q 015746          147 VVG----G-----V--TFDVVLDNNGK-----------------------NLDAVRPVADWAKSS------GVKQFLFIS  186 (401)
Q Consensus       147 ~~~----~-----~--~~d~Vv~~a~~-----------------------~~~~~~~ll~aa~~~------gv~~~v~~S  186 (401)
                      +++    .     .  ++|+|||+||.                       |+.++.+++++++..      +-.+||++|
T Consensus       549 LVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          549 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            442    2     2  48999999984                       123344555655221      224899999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH----------h--CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCC
Q 015746          187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR  254 (401)
Q Consensus       187 S~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e----------~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  254 (401)
                      |...+...              ...|++.|...+          .  .++++.|.||++.+..-...  ...........
T Consensus       629 SiAG~~Gg--------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~--~e~~~~~l~~i  692 (1688)
T 2pff_A          629 PNHGTFGG--------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA--NNIIAEGIEKM  692 (1688)
T ss_dssp             SCTTTSSC--------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT--TTTCSTTTSSS
T ss_pred             ChHhccCC--------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC--chHHHHHHHhC
Confidence            97643220              134555553222          1  25677888998874221000  00000000000


Q ss_pred             CcccCCCCcceeeeeeHHHHHHHHHHHhcCCC--cCCCcEEEec--CCC--CCCHHHHHHH
Q 015746          255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE--AASSNIFNLV--SDR--AVTLDGMAKL  309 (401)
Q Consensus       255 ~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~g~~~~~~--~~~--~~t~~el~~~  309 (401)
                             +   .....++|+|++++.++....  ...|+.+++.  +|.  ...+.++...
T Consensus       693 -------p---lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~  743 (1688)
T 2pff_A          693 -------G---VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK  743 (1688)
T ss_dssp             -------S---CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHH
T ss_pred             -------C---CCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHH
Confidence                   0   123378999999999998762  2345777663  442  2355555443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.60  E-value=1.5e-07  Score=105.09  Aligned_cols=204  Identities=15%  Similarity=0.021  Sum_probs=117.0

Q ss_pred             cccCeEEEEecCCCcccc-chHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcc-cchh--cCCCeEEEcC---Hhh
Q 015746           72 AEKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRF-NEIV--SAGGKTVWGD---PAE  143 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~-~~l~--~~~~~~~~~D---~~~  143 (401)
                      ..++.||||    ||+|. ||.+++++|+++|++|++++ |+.+.......    .+ .++.  ...+.++.+|   .++
T Consensus       650 L~gKvaLVT----GASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~----eL~~el~~~G~~v~~v~~DVsd~es  721 (1878)
T 2uv9_A          650 FQGKHALMT----GAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQ----GIYARCGARGSQLVVVPFNQGSKQD  721 (1878)
T ss_dssp             CTTCEEEEE----SCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH----HHHHHHCCTTCEEEEEECCTTCHHH
T ss_pred             CCCCEEEEE----CCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHH----HHHHHhhccCCeEEEEEcCCCCHHH
Confidence            345789999    99999 99999999999999999986 44432211000    00 1111  1245667777   555


Q ss_pred             HHHhhc----C---C--cccEEEeCCCCC-----------------------hhhHHHHHHHHH---hC---CCCEEEEe
Q 015746          144 VGNVVG----G---V--TFDVVLDNNGKN-----------------------LDAVRPVADWAK---SS---GVKQFLFI  185 (401)
Q Consensus       144 ~~~~~~----~---~--~~d~Vv~~a~~~-----------------------~~~~~~ll~aa~---~~---gv~~~v~~  185 (401)
                      +.++++    .   .  ++|+|||+||..                       +.++.+++.+++   ..   +..+||++
T Consensus       722 V~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnI  801 (1878)
T 2uv9_A          722 VEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPL  801 (1878)
T ss_dssp             HHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEE
T ss_pred             HHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEE
Confidence            555543    2   2  489999999842                       222334444422   11   22489999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCChHHHHHHHH---------H-h--CCCeEEEecCeee-cCCCCCCcHHHHHHHHHc
Q 015746          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E-N--FSNWASFRPQYMI-GSGNNKDCEEWFFDRIVR  252 (401)
Q Consensus       186 SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~---------e-~--g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~  252 (401)
                      ||...+...              ...|++.|...         + .  .++++.|.||++. .+....   .........
T Consensus       802 SS~ag~~gg--------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~---~~~~~~~~~  864 (1878)
T 2uv9_A          802 SPNHGTFGN--------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA---NNLVAEGVE  864 (1878)
T ss_dssp             CSCSSSSSC--------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH---HHHTHHHHH
T ss_pred             cchhhccCC--------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc---chhhHHHHH
Confidence            997643221              13455554221         1 1  3778899999987 332111   111112222


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCC--cCCCcEEEec--CCC--CCCHHHHHHHH
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE--AASSNIFNLV--SDR--AVTLDGMAKLC  310 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~g~~~~~~--~~~--~~t~~el~~~i  310 (401)
                      ..++          .+..++|+|.+++.++....  ...|+++++.  +|.  ...+.++...+
T Consensus       865 ~~pl----------r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          865 KLGV----------RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             TTTC----------CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             hcCC----------CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence            2111          12378999999999887654  2345777763  442  34566665544

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.52  E-value=2.2e-07  Score=87.86  Aligned_cols=99  Identities=16%  Similarity=0.153  Sum_probs=73.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcC----CCeEEEcCHhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA----GGKTVWGDPAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~D~~~~~~  146 (401)
                      ++|||+||    ||+|++|+.++..|+.+|  ++|++++++++...         ..++...    .+.. ..+..++.+
T Consensus         7 ~~mKI~Vi----GAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~---------~~dL~~~~~~~~v~~-~~~t~d~~~   72 (326)
T 1smk_A            7 PGFKVAIL----GAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV---------TADISHMDTGAVVRG-FLGQQQLEA   72 (326)
T ss_dssp             -CEEEEEE----TTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHH---------HHHHHTSCSSCEEEE-EESHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhH---------HHHhhcccccceEEE-EeCCCCHHH
Confidence            35799999    999999999999999998  89999987664110         0111111    1222 124567888


Q ss_pred             hhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +++++  |+|||+++.              |+..++++++++++.+.+.+|+++|
T Consensus        73 al~ga--DvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           73 ALTGM--DLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             HHTTC--SEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             HcCCC--CEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            88887  999999984              4678999999999998877888877

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.43  E-value=2.9e-07  Score=88.46  Aligned_cols=87  Identities=14%  Similarity=0.107  Sum_probs=57.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCCcccCCC-CC---CCccc-chh--cCCCeEEEcC---
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKK-PP---FNRFN-EIV--SAGGKTVWGD---  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~-~~---~~~~~-~l~--~~~~~~~~~D---  140 (401)
                      ..+|++|||    ||++.||..+++.|++ +|++|++++|+.+....... ..   ...+. .+.  ...+..+.+|   
T Consensus        45 ~~gKvaLVT----Gas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           45 NGPKRVLVI----GASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             TCCSEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCCCEEEEe----CcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            346899999    9999999999999999 99999999987754321000 00   00011 111  1245567777   


Q ss_pred             HhhHHHhhcC----C-cccEEEeCCCC
Q 015746          141 PAEVGNVVGG----V-TFDVVLDNNGK  162 (401)
Q Consensus       141 ~~~~~~~~~~----~-~~d~Vv~~a~~  162 (401)
                      .+++.++++.    . ++|++||+||.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            5555554432    2 48999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.41  E-value=4e-07  Score=88.24  Aligned_cols=86  Identities=17%  Similarity=0.167  Sum_probs=56.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCCcccCCCCC----CCcc-cchhc--CCCeEEEcC---H
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPP----FNRF-NEIVS--AGGKTVWGD---P  141 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~----~~~~-~~l~~--~~~~~~~~D---~  141 (401)
                      .+|++|||    ||++.||.++++.|++ +|++|++++|+.+.........    ...+ ..+..  ..+..+.+|   .
T Consensus        60 ~gKvaLVT----GASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVI----GASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCH
Confidence            36899999    9999999999999999 9999999999876543210000    0001 11111  235567777   4


Q ss_pred             hhHHHhh----cCC--cccEEEeCCCC
Q 015746          142 AEVGNVV----GGV--TFDVVLDNNGK  162 (401)
Q Consensus       142 ~~~~~~~----~~~--~~d~Vv~~a~~  162 (401)
                      +++.+++    +..  ++|++||+||.
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            4444433    222  48999999875

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.40  E-value=1.3e-06  Score=71.92  Aligned_cols=94  Identities=15%  Similarity=0.150  Sum_probs=69.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++|+|+    |+ |++|+.+++.|.++|++|++++++++...           .+...++.++.+|   ++.+.++ .
T Consensus         5 ~~~~v~I~----G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~-----------~~~~~~~~~~~gd~~~~~~l~~~-~   67 (141)
T 3llv_A            5 GRYEYIVI----GS-EAAGVGLVRELTAAGKKVLAVDKSKEKIE-----------LLEDEGFDAVIADPTDESFYRSL-D   67 (141)
T ss_dssp             -CCSEEEE----CC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH-----------HHHHTTCEEEECCTTCHHHHHHS-C
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-----------HHHHCCCcEEECCCCCHHHHHhC-C
Confidence            36789999    87 99999999999999999999999875432           2333477888888   4445544 1


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      -.++|+||.+.+ +......++..+++.+..++|-
T Consensus        68 ~~~~d~vi~~~~-~~~~n~~~~~~a~~~~~~~iia  101 (141)
T 3llv_A           68 LEGVSAVLITGS-DDEFNLKILKALRSVSDVYAIV  101 (141)
T ss_dssp             CTTCSEEEECCS-CHHHHHHHHHHHHHHCCCCEEE
T ss_pred             cccCCEEEEecC-CHHHHHHHHHHHHHhCCceEEE
Confidence            123699999887 5666677778888877555553

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.27  E-value=6.7e-07  Score=84.72  Aligned_cols=148  Identities=11%  Similarity=0.071  Sum_probs=90.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecC----CCCcccCCCCCCCcccchhcC--CCeEEEcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVG----DENSDKMKKPPFNRFNEIVSA--GGKTVWGD  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D  140 (401)
                      .|||+||    ||+||||++++..|+.+|+       +|++++++    .++...       ...++.+.  .......+
T Consensus         5 ~~KI~Vi----GaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g-------~~~dl~~~~~~~~~~i~~   73 (329)
T 1b8p_A            5 PMRVAVT----GAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQG-------VMMEIDDCAFPLLAGMTA   73 (329)
T ss_dssp             CEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHH-------HHHHHHTTTCTTEEEEEE
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchh-------hHHHHhhhcccccCcEEE
Confidence            4799999    9999999999999999885       79888877    321211       00011110  11111112


Q ss_pred             HhhHHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCC-CC-EEEEecccc---c---ccCCCCCC
Q 015746          141 PAEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFISSAG---I---YKPADEPP  198 (401)
Q Consensus       141 ~~~~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~g-v~-~~v~~SS~~---v---y~~~~~~~  198 (401)
                      ..++.++++++  |+|||+++.              |+..++++++++++.+ .+ +||++|...   +   +.....  
T Consensus        74 ~~~~~~al~~a--D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~--  149 (329)
T 1b8p_A           74 HADPMTAFKDA--DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPS--  149 (329)
T ss_dssp             ESSHHHHTTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTT--
T ss_pred             ecCcHHHhCCC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCC--
Confidence            45677888887  999999994              4677899999999984 66 899988622   0   111101  


Q ss_pred             CCCCCCCCCCCChHHH---HH-HHHHhCCCeEEEecCeeecCCC
Q 015746          199 HVEGDVVKPDAGHVQV---EK-YISENFSNWASFRPQYMIGSGN  238 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~---ek-~~~e~g~~~~ilRp~~v~G~~~  238 (401)
                      ++..-.  ...+....   .. +....|++...++..+|+|.+.
T Consensus       150 ~p~~~v--~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          150 LPAKNF--TAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             SCGGGE--EECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             CCHHHE--EEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence            111100  11133222   22 3344588777777777888654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.26  E-value=3.6e-06  Score=68.64  Aligned_cols=94  Identities=19%  Similarity=0.309  Sum_probs=66.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcCH---hhHHHh-h
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDP---AEVGNV-V  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~---~~~~~~-~  148 (401)
                      +|+|+|+    |+ |++|+.+++.|.+.|++|++++|+++...           .+.. .++.++.+|.   +.+.+. +
T Consensus         4 ~m~i~Ii----G~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~-----------~~~~~~~~~~~~~d~~~~~~l~~~~~   67 (140)
T 1lss_A            4 GMYIIIA----GI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-----------KASAEIDALVINGDCTKIKTLEDAGI   67 (140)
T ss_dssp             -CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-----------HHHHHCSSEEEESCTTSHHHHHHTTT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-----------HHHHhcCcEEEEcCCCCHHHHHHcCc
Confidence            4799999    86 99999999999999999999998764332           1211 2566777773   333333 3


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      .+  .|+||++.+.+ .....+.+.++..+.+++|..+
T Consensus        68 ~~--~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           68 ED--ADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             TT--CSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEEC
T ss_pred             cc--CCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEe
Confidence            44  59999997653 3344667788888877777543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.21  E-value=2.8e-06  Score=82.71  Aligned_cols=87  Identities=18%  Similarity=0.173  Sum_probs=57.3

Q ss_pred             cccCeEEEEecCCCccccchHH--HHHHHHhCCCeEEEEecCCCCcccCCCCC----CCcccc---hhcCCCeEEEcC--
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFY--LAKELLGSGHEVTIMTVGDENSDKMKKPP----FNRFNE---IVSAGGKTVWGD--  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~--l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~---l~~~~~~~~~~D--  140 (401)
                      ..+|++|||    ||++.||..  +++.|.++|++|++++|+...........    ...+.+   .....+..+.+|  
T Consensus        58 ~~gK~aLVT----GassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           58 RGPKKVLIV----GASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCSEEEEE----SCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            457899999    999999999  99999999999999999775432100000    001111   112345677777  


Q ss_pred             -HhhHHHhhc----CC-cccEEEeCCCC
Q 015746          141 -PAEVGNVVG----GV-TFDVVLDNNGK  162 (401)
Q Consensus       141 -~~~~~~~~~----~~-~~d~Vv~~a~~  162 (401)
                       .+++.++++    .. ++|++||+||.
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence             444444443    22 48999999885

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.17  E-value=1.1e-06  Score=85.59  Aligned_cols=100  Identities=15%  Similarity=0.119  Sum_probs=72.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC---CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      |++|+|+    || |+||+.+++.|+++|   .+|++.+|+.++...+..    .+......++..+..|   .+++.++
T Consensus         1 M~kVlIi----Ga-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~----~l~~~~~~~~~~~~~D~~d~~~l~~~   71 (405)
T 4ina_A            1 MAKVLQI----GA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQ----SIKAKGYGEIDITTVDADSIEELVAL   71 (405)
T ss_dssp             -CEEEEE----CC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHH----HHHHTTCCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHH----HhhhhcCCceEEEEecCCCHHHHHHH
Confidence            5799999    99 999999999999998   389999998866543211    0110001246677776   6788888


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEe
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                      +++.++|+|||+++..  ....++++|.+.|+. ++-+
T Consensus        72 l~~~~~DvVin~ag~~--~~~~v~~a~l~~g~~-vvD~  106 (405)
T 4ina_A           72 INEVKPQIVLNIALPY--QDLTIMEACLRTGVP-YLDT  106 (405)
T ss_dssp             HHHHCCSEEEECSCGG--GHHHHHHHHHHHTCC-EEES
T ss_pred             HHhhCCCEEEECCCcc--cChHHHHHHHHhCCC-EEEe
Confidence            8875579999999854  357889999999985 5433

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.14  E-value=8.1e-07  Score=83.55  Aligned_cols=102  Identities=16%  Similarity=0.162  Sum_probs=69.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEec--CCCCcccCCCCCCCcccc---hhcCCCeEEEcCHhhHHHh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTV--GDENSDKMKKPPFNRFNE---IVSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~D~~~~~~~  147 (401)
                      |||+||    ||+|+||++++..|+.+|+  ++..+++  +.++.....    ..+.+   +....+++... .+++.++
T Consensus         1 mKI~V~----GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~----~dl~~~~~~~~~~~~i~~~-~d~l~~a   71 (313)
T 1hye_A            1 MKVTII----GASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLR----EDIYDALAGTRSDANIYVE-SDENLRI   71 (313)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHH----HHHHHHHTTSCCCCEEEEE-ETTCGGG
T ss_pred             CEEEEE----CCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHH----HHHHHhHHhcCCCeEEEeC-CcchHHH
Confidence            589999    9999999999999999885  5777776  332111000    00111   11012233321 2236667


Q ss_pred             hcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ++++  |+|||+|+.              |+..++++++++++.+ +.+|+++|.
T Consensus        72 l~ga--D~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           72 IDES--DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             GTTC--SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             hCCC--CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            8887  999999984              6788999999999999 888888873

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.14  E-value=6.5e-06  Score=81.24  Aligned_cols=92  Identities=22%  Similarity=0.226  Sum_probs=66.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+++|+|+    | +|++|+++++.|++.|++|++.+|+.++...+...    +     .++..+.+|   .+++.+++.
T Consensus         2 ~~k~VlVi----G-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~-----~~~~~~~~Dv~d~~~l~~~l~   67 (450)
T 1ff9_A            2 ATKSVLML----G-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----V-----QHSTPISLDVNDDAALDAEVA   67 (450)
T ss_dssp             CCCEEEEE----C-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----C-----TTEEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----c-----CCceEEEeecCCHHHHHHHHc
Confidence            46799999    8 79999999999999999999999987654433211    0     124455555   567778887


Q ss_pred             CCcccEEEeCCCCCh----------------------hhHHHHHHHHHhCCCC
Q 015746          150 GVTFDVVLDNNGKNL----------------------DAVRPVADWAKSSGVK  180 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~----------------------~~~~~ll~aa~~~gv~  180 (401)
                      +  +|+|||+++...                      ....+++++|+++|++
T Consensus        68 ~--~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           68 K--HDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             T--SSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             C--CcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            5  599999998521                      2356777888888873

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.13  E-value=4.5e-06  Score=80.18  Aligned_cols=92  Identities=24%  Similarity=0.188  Sum_probs=69.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~~~~  148 (401)
                      ..+|||+|.    |+ |++|+.+++.|.+ .++|.+.+|+.++.+++..            .+..+..   |.+++.+++
T Consensus        14 g~~mkilvl----Ga-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~------------~~~~~~~d~~d~~~l~~~~   75 (365)
T 3abi_A           14 GRHMKVLIL----GA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE------------FATPLKVDASNFDKLVEVM   75 (365)
T ss_dssp             --CCEEEEE----CC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT------------TSEEEECCTTCHHHHHHHH
T ss_pred             CCccEEEEE----CC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc------------cCCcEEEecCCHHHHHHHH
Confidence            346899999    98 9999999998865 5899999998765543321            2333444   478888999


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +++  |+||++.+..  ....++++|.++|+ ++|=+|
T Consensus        76 ~~~--DvVi~~~p~~--~~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           76 KEF--ELVIGALPGF--LGFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             TTC--SEEEECCCGG--GHHHHHHHHHHHTC-EEEECC
T ss_pred             hCC--CEEEEecCCc--ccchHHHHHHhcCc-ceEeee
Confidence            886  9999998864  35689999999997 787665

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.13  E-value=4.2e-05  Score=63.85  Aligned_cols=97  Identities=19%  Similarity=0.190  Sum_probs=68.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-h
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-V  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~  148 (401)
                      ..++|+|+    |+ |.+|+.+++.|.+.|++|++++|+++....+..          ..++.++.+|   .+.+.++ +
T Consensus        18 ~~~~v~Ii----G~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~   82 (155)
T 2g1u_A           18 KSKYIVIF----GC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGM   82 (155)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTG
T ss_pred             CCCcEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCc
Confidence            35799999    75 999999999999999999999998865543221          1255666676   3344443 4


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHh-CCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~-~gv~~~v~~SS  187 (401)
                      .+  +|+||.+.+. ......+++.++. .+..++|...+
T Consensus        83 ~~--ad~Vi~~~~~-~~~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           83 EK--ADMVFAFTND-DSTNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             GG--CSEEEECSSC-HHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred             cc--CCEEEEEeCC-cHHHHHHHHHHHHHCCCCeEEEEEC
Confidence            44  5999998874 3455666777777 56666665543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.12  E-value=4.1e-06  Score=78.34  Aligned_cols=100  Identities=16%  Similarity=0.165  Sum_probs=68.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEec--CCCCcccCCCCCCCcccch--hcCCCeEEEcCHhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTV--GDENSDKMKKPPFNRFNEI--VSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D~~~~~~~~  148 (401)
                      |||+||    ||+|++|+.++..|+.+|+  +++.+++  +.++.....    ..+.+.  ....+.+..+|    .+.+
T Consensus         1 mKI~Ii----GAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~----~dl~~~~~~~~~~~v~~~~----~~a~   68 (303)
T 1o6z_A            1 TKVSVV----GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQA----ADTNHGIAYDSNTRVRQGG----YEDT   68 (303)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHH----HHHHHHHTTTCCCEEEECC----GGGG
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHH----HHHHHHHhhCCCcEEEeCC----HHHh
Confidence            689999    9999999999999999886  6777777  432221100    011111  01233443332    4457


Q ss_pred             cCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +++  |+|||+++.              |+..++++++++++.+.+.+|+++|.
T Consensus        69 ~~a--DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           69 AGS--DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             TTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             CCC--CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            776  999999984              46789999999999988888888773

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.04  E-value=8.7e-06  Score=95.48  Aligned_cols=143  Identities=10%  Similarity=0.046  Sum_probs=94.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .++.+|||    ||+|.||+.+++.|+++|++ |++++|+..+......    ...++..  ..+.++.+|   .+++.+
T Consensus      1883 ~~k~~lIT----Ggs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~----~~~~l~~~g~~v~~~~~Dvsd~~~v~~ 1954 (2512)
T 2vz8_A         1883 PHKSYVIT----GGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR----QVREWRRQGVQVLVSTSNASSLDGARS 1954 (2512)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHH----HHHHHHHTTCEEEEECCCSSSHHHHHH
T ss_pred             CCCEEEEE----CCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHH----HHHHHHhCCCEEEEEecCCCCHHHHHH
Confidence            46789999    99999999999999999997 7777887654321100    1112221  234566666   555555


Q ss_pred             hhcCC----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCC
Q 015746          147 VVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       147 ~~~~~----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      +++..    ++|+|||+||.                    |+.++.++.+++...  ...+||++||.......      
T Consensus      1955 ~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~------ 2028 (2512)
T 2vz8_A         1955 LITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN------ 2028 (2512)
T ss_dssp             HHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC------
T ss_pred             HHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC------
Confidence            54322    48999999993                    688888887776553  23589999997654322      


Q ss_pred             CCCCCCCCCChHHHHHHH--------HHhCCCeEEEecCeeec
Q 015746          201 EGDVVKPDAGHVQVEKYI--------SENFSNWASFRPQYMIG  235 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~--------~e~g~~~~ilRp~~v~G  235 (401)
                            +....|.+.|..        +..|++...+.++.+-+
T Consensus      2029 ------~g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2029 ------AGQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             ------CCcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence                  112566666633        33488877777765543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.03  E-value=1.4e-05  Score=71.11  Aligned_cols=72  Identities=18%  Similarity=0.242  Sum_probs=51.4

Q ss_pred             ccCeEEEEecCCCc----------------cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~  136 (401)
                      .+|+||||    ||                +|.+|.++++.|+++|++|+.+.|.......            ...++.+
T Consensus         2 ~gk~vlVT----gG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------------~~~~~~~   65 (232)
T 2gk4_A            2 NAMKILVT----SGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------------PHPNLSI   65 (232)
T ss_dssp             -CCEEEEE----CSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------------CCTTEEE
T ss_pred             CCCEEEEe----CCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------------CCCCeEE
Confidence            36899999    99                9999999999999999999999997632110            0124555


Q ss_pred             EEcC-H----hhHHHhhcCCcccEEEeCCCC
Q 015746          137 VWGD-P----AEVGNVVGGVTFDVVLDNNGK  162 (401)
Q Consensus       137 ~~~D-~----~~~~~~~~~~~~d~Vv~~a~~  162 (401)
                      +..+ .    +.+.+.+..  .|++||+|+.
T Consensus        66 ~~v~s~~em~~~v~~~~~~--~Dili~aAAv   94 (232)
T 2gk4_A           66 REITNTKDLLIEMQERVQD--YQVLIHSMAV   94 (232)
T ss_dssp             EECCSHHHHHHHHHHHGGG--CSEEEECSBC
T ss_pred             EEHhHHHHHHHHHHHhcCC--CCEEEEcCcc
Confidence            5554 2    333333433  5999999985

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.02  E-value=1.3e-05  Score=66.83  Aligned_cols=96  Identities=13%  Similarity=0.204  Sum_probs=66.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-  147 (401)
                      ..++|+|+    |+ |.+|+.+++.|.+.|++|+++++++ +..+.        +......++.++.+|   ++.+.++ 
T Consensus         2 ~~~~vlI~----G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~--------~~~~~~~~~~~i~gd~~~~~~l~~a~   68 (153)
T 1id1_A            2 RKDHFIVC----GH-SILAINTILQLNQRGQNVTVISNLPEDDIKQ--------LEQRLGDNADVIPGDSNDSSVLKKAG   68 (153)
T ss_dssp             CCSCEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHH--------HHHHHCTTCEEEESCTTSHHHHHHHT
T ss_pred             CCCcEEEE----CC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHH--------HHHhhcCCCeEEEcCCCCHHHHHHcC
Confidence            35789999    85 9999999999999999999999974 21111        111223478889998   4556655 


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEE
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF  184 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~  184 (401)
                      +.++  |+||-+.+.+ .....+...+++. +..++|-
T Consensus        69 i~~a--d~vi~~~~~d-~~n~~~~~~a~~~~~~~~ii~  103 (153)
T 1id1_A           69 IDRC--RAILALSDND-ADNAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             TTTC--SEEEECSSCH-HHHHHHHHHHHHHTSSSCEEE
T ss_pred             hhhC--CEEEEecCCh-HHHHHHHHHHHHHCCCCEEEE
Confidence            5655  9999887643 4455566677776 5555553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.96  E-value=4.8e-06  Score=77.24  Aligned_cols=78  Identities=19%  Similarity=0.256  Sum_probs=57.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEc---CHhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWG---DPAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~---D~~~~~~~  147 (401)
                      ..+++||||    ||+|.+|+++++.|+++|++|++++|+.++...+.       .++.. .++.++.+   |.+++.++
T Consensus       117 l~gk~vlVt----GaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~-------~~~~~~~~~~~~~~D~~~~~~~~~~  185 (287)
T 1lu9_A          117 VKGKKAVVL----AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-------DSVNKRFKVNVTAAETADDASRAEA  185 (287)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHHHHHTCCCEEEECCSHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEecCCCHHHHHHH
Confidence            356899999    99999999999999999999999999875443211       11110 13334444   46778888


Q ss_pred             hcCCcccEEEeCCCC
Q 015746          148 VGGVTFDVVLDNNGK  162 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~  162 (401)
                      ++..  |+|||+++.
T Consensus       186 ~~~~--DvlVn~ag~  198 (287)
T 1lu9_A          186 VKGA--HFVFTAGAI  198 (287)
T ss_dssp             TTTC--SEEEECCCT
T ss_pred             HHhC--CEEEECCCc
Confidence            8775  999999974

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.78  E-value=0.00018  Score=61.70  Aligned_cols=93  Identities=19%  Similarity=0.187  Sum_probs=67.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hhHHHh-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~~~~~-  147 (401)
                      .+++|+|+    | .|.+|+.+++.|.+. |++|+++++++++..           .+...++.++.+|.   +.+.++ 
T Consensus        38 ~~~~v~Ii----G-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~-----------~~~~~g~~~~~gd~~~~~~l~~~~  101 (183)
T 3c85_A           38 GHAQVLIL----G-MGRIGTGAYDELRARYGKISLGIEIREEAAQ-----------QHRSEGRNVISGDATDPDFWERIL  101 (183)
T ss_dssp             TTCSEEEE----C-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHH-----------HHHHTTCCEEECCTTCHHHHHTBC
T ss_pred             CCCcEEEE----C-CCHHHHHHHHHHHhccCCeEEEEECCHHHHH-----------HHHHCCCCEEEcCCCCHHHHHhcc
Confidence            35789999    7 699999999999999 999999999875432           23334777888874   444544 


Q ss_pred             -hcCCcccEEEeCCCCChhhHHHHHHHHHhCC-CCEEEE
Q 015746          148 -VGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLF  184 (401)
Q Consensus       148 -~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~g-v~~~v~  184 (401)
                       +.+  .|+||.+.+. ......++..+++.+ ..++|.
T Consensus       102 ~~~~--ad~vi~~~~~-~~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          102 DTGH--VKLVLLAMPH-HQGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             SCCC--CCEEEECCSS-HHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCC--CCEEEEeCCC-hHHHHHHHHHHHHHCCCCEEEE
Confidence             444  5999987764 455667777888877 344543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.77  E-value=3.4e-05  Score=68.28  Aligned_cols=92  Identities=24%  Similarity=0.354  Sum_probs=65.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~  150 (401)
                      |+|+|+    |+ |.+|+++++.|.++|++|++++++++....+        .  ...++.++.+|   .+.+.++ +.+
T Consensus         1 M~iiIi----G~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l--------~--~~~~~~~i~gd~~~~~~l~~a~i~~   65 (218)
T 3l4b_C            1 MKVIII----GG-ETTAYYLARSMLSRKYGVVIINKDRELCEEF--------A--KKLKATIIHGDGSHKEILRDAEVSK   65 (218)
T ss_dssp             CCEEEE----CC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHH--------H--HHSSSEEEESCTTSHHHHHHHTCCT
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH--------H--HHcCCeEEEcCCCCHHHHHhcCccc
Confidence            689999    85 9999999999999999999999988644321        1  12367889998   4555554 444


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHh-CCCCEEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLF  184 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~-~gv~~~v~  184 (401)
                        .|+||-+.+.+ .....+...+++ .+..++|-
T Consensus        66 --ad~vi~~~~~d-~~n~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           66 --NDVVVILTPRD-EVNLFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             --TCEEEECCSCH-HHHHHHHHHHHHTSCCCEEEE
T ss_pred             --CCEEEEecCCc-HHHHHHHHHHHHHcCCCeEEE
Confidence              49999887654 334445556665 57766663

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.77  E-value=3.3e-05  Score=76.39  Aligned_cols=89  Identities=20%  Similarity=0.208  Sum_probs=62.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..+++|+|+    |+ |++|+.+++.|++. |++|++++|+.++...+..        .  .++..+..|   .+++.++
T Consensus        21 l~~k~VlIi----GA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~--------~--~~~~~~~~D~~d~~~l~~~   85 (467)
T 2axq_A           21 HMGKNVLLL----GS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK--------P--SGSKAISLDVTDDSALDKV   85 (467)
T ss_dssp             --CEEEEEE----CC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG--------G--GTCEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEE----CC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH--------h--cCCcEEEEecCCHHHHHHH
Confidence            346799999    97 99999999999998 7899999998765432211        0  145555555   5677777


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                      +.+.  |+|||+++...  ...+.++|.+.|+
T Consensus        86 l~~~--DvVIn~tp~~~--~~~v~~a~l~~g~  113 (467)
T 2axq_A           86 LADN--DVVISLIPYTF--HPNVVKSAIRTKT  113 (467)
T ss_dssp             HHTS--SEEEECSCGGG--HHHHHHHHHHHTC
T ss_pred             HcCC--CEEEECCchhh--hHHHHHHHHhcCC
Confidence            8764  99999988532  2345566666554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.74  E-value=0.00015  Score=59.42  Aligned_cols=91  Identities=15%  Similarity=0.206  Sum_probs=63.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~  149 (401)
                      +++|+|+    |+ |.+|+.+++.|.+.|++|++++++++...           .+...++.++.+|   ++.+.++ +.
T Consensus         7 ~~~viIi----G~-G~~G~~la~~L~~~g~~v~vid~~~~~~~-----------~~~~~g~~~i~gd~~~~~~l~~a~i~   70 (140)
T 3fwz_A            7 CNHALLV----GY-GRVGSLLGEKLLASDIPLVVIETSRTRVD-----------ELRERGVRAVLGNAANEEIMQLAHLE   70 (140)
T ss_dssp             CSCEEEE----CC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH-----------HHHHTTCEEEESCTTSHHHHHHTTGG
T ss_pred             CCCEEEE----Cc-CHHHHHHHHHHHHCCCCEEEEECCHHHHH-----------HHHHcCCCEEECCCCCHHHHHhcCcc
Confidence            4689999    65 99999999999999999999999886443           3334588899998   3444443 33


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v  183 (401)
                      +  .|+||-+.+.+. ....++..+++. +..++|
T Consensus        71 ~--ad~vi~~~~~~~-~n~~~~~~a~~~~~~~~ii  102 (140)
T 3fwz_A           71 C--AKWLILTIPNGY-EAGEIVASARAKNPDIEII  102 (140)
T ss_dssp             G--CSEEEECCSCHH-HHHHHHHHHHHHCSSSEEE
T ss_pred             c--CCEEEEECCChH-HHHHHHHHHHHHCCCCeEE
Confidence            3  599998877543 233345556554 333444

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.71  E-value=3.2e-05  Score=67.21  Aligned_cols=98  Identities=16%  Similarity=0.220  Sum_probs=65.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EE-EcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~D---~~~~~~~  147 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+..+.           .+.. ++ ..|   .+.+.+.
T Consensus        38 ~g~~vlV~----Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-----------~g~~~~~d~~~~~~~~~~~~~  102 (198)
T 1pqw_A           38 PGERVLIH----SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-----------LGVEYVGDSRSVDFADEILEL  102 (198)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-----------TCCSEEEETTCSTHHHHHHHH
T ss_pred             CCCEEEEe----eCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------cCCCEEeeCCcHHHHHHHHHH
Confidence            46899999    999999999999999999999999987654322111           1221 11 112   2333344


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ..+.++|+||++++.  ......++.++..|  ++|.+++..
T Consensus       103 ~~~~~~D~vi~~~g~--~~~~~~~~~l~~~G--~~v~~g~~~  140 (198)
T 1pqw_A          103 TDGYGVDVVLNSLAG--EAIQRGVQILAPGG--RFIELGKKD  140 (198)
T ss_dssp             TTTCCEEEEEECCCT--HHHHHHHHTEEEEE--EEEECSCGG
T ss_pred             hCCCCCeEEEECCch--HHHHHHHHHhccCC--EEEEEcCCC
Confidence            434458999999983  34455555555444  799888754

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.68  E-value=0.00013  Score=64.67  Aligned_cols=37  Identities=22%  Similarity=0.368  Sum_probs=33.5

Q ss_pred             cccCeEEEEecCCCc----------------cccchHHHHHHHHhCCCeEEEEecCC
Q 015746           72 AEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        72 ~~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      ..+++||||    ||                +|.+|..+++.|+++|++|+++.+..
T Consensus         6 l~gk~vlVT----gG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~   58 (226)
T 1u7z_A            6 LKHLNIMIT----AGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV   58 (226)
T ss_dssp             TTTCEEEEE----ESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CCCCEEEEE----CCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence            457899999    99                69999999999999999999988765

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.55  E-value=0.00023  Score=66.63  Aligned_cols=99  Identities=21%  Similarity=0.232  Sum_probs=66.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcC-CCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~  151 (401)
                      |||.|+    ||+|++|+.++..|+.+|  ++|+++++++.....+      .+.+...+ .++... ...++.++++++
T Consensus         1 mKI~Ii----Ga~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~------dL~~~~~~~~l~~~~-~t~d~~~a~~~a   69 (314)
T 1mld_A            1 AKVAVL----GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA------DLSHIETRATVKGYL-GPEQLPDCLKGC   69 (314)
T ss_dssp             CEEEEE----TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH------HHTTSSSSCEEEEEE-SGGGHHHHHTTC
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHH------HHhccCcCceEEEec-CCCCHHHHhCCC
Confidence            689999    999999999999999988  7899999876111100      01111101 112111 124677788887


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                        |+||++++.              |...++.+++.+++.+.+ +||++|
T Consensus        70 --DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           70 --DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             --SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             --CEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence              999999984              346677888888777644 677765

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.50  E-value=0.0002  Score=68.07  Aligned_cols=99  Identities=16%  Similarity=0.154  Sum_probs=63.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-----C-eEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcCHhhHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-----H-EVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-----~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~~~  145 (401)
                      +|++|.|+    ||||++|+.+++.|++++     + +|+.+.+.......+..    .+..+.. ..+.+...|.++  
T Consensus         8 ~m~kVaIv----GATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~----~~~~l~~~~~~~~~~~~~~~--   77 (352)
T 2nqt_A            8 NATKVAVA----GASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGE----HHPHLTPLAHRVVEPTEAAV--   77 (352)
T ss_dssp             SCEEEEEE----TTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGG----TCTTCGGGTTCBCEECCHHH--
T ss_pred             cCCEEEEE----CCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhh----hcccccccceeeeccCCHHH--
Confidence            35799999    999999999999999988     4 77777644322111110    0011111 133333334332  


Q ss_pred             HhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                        +.+  +|+||.+.+..  ....++..+ +.|+ ++|-+|+..
T Consensus        78 --~~~--~DvVf~alg~~--~s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           78 --LGG--HDAVFLALPHG--HSAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             --HTT--CSEEEECCTTS--CCHHHHHHS-CTTS-EEEECSSTT
T ss_pred             --hcC--CCEEEECCCCc--chHHHHHHH-hCCC-EEEEECCCc
Confidence              344  49999998854  466777888 8886 688888864

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.50  E-value=0.00048  Score=81.34  Aligned_cols=80  Identities=14%  Similarity=0.167  Sum_probs=56.3

Q ss_pred             cccCeEEEEecCCCcccc-chHHHHHHHHhCCCeEEEEecCCCC-----cccCCCCCCCcccchhc--CCCeEEEcC---
Q 015746           72 AEKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMTVGDEN-----SDKMKKPPFNRFNEIVS--AGGKTVWGD---  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~l~~--~~~~~~~~D---  140 (401)
                      ..+|.+|||    ||++. ||..+++.|+++|++|++++|+.+.     ...+.       .++..  ..+..+.+|   
T Consensus      2134 l~gKvaLVT----GAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~-------~~l~~~G~~~~~v~~Dvtd 2202 (3089)
T 3zen_D         2134 XXDEVAVVT----GASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLY-------RDHARFDATLWVVPANMAS 2202 (3089)
T ss_dssp             CCCCEEEEE----SCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHH-------HHHCCTTCEEEEEECCTTC
T ss_pred             CCCCEEEEe----CCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHH-------HHHhhcCCeEEEEEecCCC
Confidence            567899999    99999 9999999999999999999998754     21110       11111  124556666   


Q ss_pred             HhhHHHhh----c----CC-cccEEEeCCCC
Q 015746          141 PAEVGNVV----G----GV-TFDVVLDNNGK  162 (401)
Q Consensus       141 ~~~~~~~~----~----~~-~~d~Vv~~a~~  162 (401)
                      .+++.+++    +    .. ++|++||+||.
T Consensus      2203 ~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2203 YSDIDKLVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHHHHHHHHHHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHHHHHHHHHHhhhhhhcCCCCEEEECCCc
Confidence            55555553    2    11 47999999995

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.45  E-value=0.00021  Score=63.78  Aligned_cols=89  Identities=16%  Similarity=0.190  Sum_probs=65.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~  149 (401)
                      .++|+|+    |+ |.+|+.+++.|.++|+ |++++++++...           .+. .++.++.+|   ++.+.++ +.
T Consensus         9 ~~~viI~----G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~-----------~~~-~~~~~i~gd~~~~~~l~~a~i~   70 (234)
T 2aef_A            9 SRHVVIC----GW-SESTLECLRELRGSEV-FVLAEDENVRKK-----------VLR-SGANFVHGDPTRVSDLEKANVR   70 (234)
T ss_dssp             -CEEEEE----SC-CHHHHHHHHHSTTSEE-EEEESCGGGHHH-----------HHH-TTCEEEESCTTCHHHHHHTTCT
T ss_pred             CCEEEEE----CC-ChHHHHHHHHHHhCCe-EEEEECCHHHHH-----------HHh-cCCeEEEcCCCCHHHHHhcCcc
Confidence            4789999    86 9999999999999999 999988875432           222 478899998   4555555 55


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFL  183 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v  183 (401)
                      ++  |.||.+.+.+ .....++..+++.+.+ ++|
T Consensus        71 ~a--d~vi~~~~~d-~~n~~~~~~a~~~~~~~~ii  102 (234)
T 2aef_A           71 GA--RAVIVDLESD-SETIHCILGIRKIDESVRII  102 (234)
T ss_dssp             TC--SEEEECCSCH-HHHHHHHHHHHHHCSSSEEE
T ss_pred             hh--cEEEEcCCCc-HHHHHHHHHHHHHCCCCeEE
Confidence            54  9999887643 4455566778887765 555

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.31  E-value=9e-05  Score=69.96  Aligned_cols=100  Identities=13%  Similarity=0.156  Sum_probs=67.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--e-----EEEEecCCC--CcccCCCCCCCcccchhcCC---CeEEEcCH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--E-----VTIMTVGDE--NSDKMKKPPFNRFNEIVSAG---GKTVWGDP  141 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~-----V~~~~r~~~--~~~~~~~~~~~~~~~l~~~~---~~~~~~D~  141 (401)
                      .+||+||    ||+|+||++++..|+..|.  +     ++++++...  .....       ..++.+..   ..-+. ..
T Consensus         3 ~~kV~V~----GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~-------a~DL~~~~~~~~~~~~-~~   70 (333)
T 5mdh_A            3 PIRVLVT----GAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGV-------LMELQDCALPLLKDVI-AT   70 (333)
T ss_dssp             CEEEEES----STTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH-------HHHHHHTCCTTEEEEE-EE
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhh-------HhhhHhhhhcccCCEE-Ec
Confidence            4799999    9999999999999998875  4     888887541  11110       01111111   11111 12


Q ss_pred             hhHHHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC--EEEEecc
Q 015746          142 AEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK--QFLFISS  187 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~--~~v~~SS  187 (401)
                      .+..+.++++  |+||++||.              |...++++++++++.+.+  +++.+|-
T Consensus        71 ~~~~~~~~da--DvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           71 DKEEIAFKDL--DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             SCHHHHTTTC--SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCcHHHhCCC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            3455667787  999999984              567789999999998765  5776664

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.29  E-value=0.00028  Score=66.59  Aligned_cols=96  Identities=22%  Similarity=0.265  Sum_probs=65.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~  147 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+.++        .+   +.+ ++.. +   .+.+.+.
T Consensus       145 ~g~~vlV~----Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~--------~~---g~~~~~d~~~~~~~~~i~~~  209 (333)
T 1wly_A          145 PGDYVLIH----AAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR--------KL---GCHHTINYSTQDFAEVVREI  209 (333)
T ss_dssp             TTCEEEET----TTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HH---TCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------Hc---CCCEEEECCCHHHHHHHHHH
Confidence            46799999    99999999999999999999999999875433211        11   222 2211 2   2344444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+.++|+||+++|.  ......++.++..|  ++|.++.
T Consensus       210 ~~~~~~d~vi~~~g~--~~~~~~~~~l~~~G--~iv~~g~  245 (333)
T 1wly_A          210 TGGKGVDVVYDSIGK--DTLQKSLDCLRPRG--MCAAYGH  245 (333)
T ss_dssp             HTTCCEEEEEECSCT--TTHHHHHHTEEEEE--EEEECCC
T ss_pred             hCCCCCeEEEECCcH--HHHHHHHHhhccCC--EEEEEec
Confidence            444468999999986  44555566555544  6887765

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.00019  Score=67.52  Aligned_cols=96  Identities=14%  Similarity=0.183  Sum_probs=65.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D---~~~~~~~  147 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+.++        .+   +.. ++. .|   .+.+.+.
T Consensus       140 ~g~~vlV~----Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~--------~~---g~~~~~~~~~~~~~~~~~~~  204 (327)
T 1qor_A          140 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL--------KA---GAWQVINYREEDLVERLKEI  204 (327)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH--------HH---TCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------Hc---CCCEEEECCCccHHHHHHHH
Confidence            46899999    99999999999999999999999998765433211        11   222 221 12   2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+.++|+||+++|  -......++.++..|  ++|.+++
T Consensus       205 ~~~~~~D~vi~~~g--~~~~~~~~~~l~~~G--~iv~~g~  240 (327)
T 1qor_A          205 TGGKKVRVVYDSVG--RDTWERSLDCLQRRG--LMVSFGN  240 (327)
T ss_dssp             TTTCCEEEEEECSC--GGGHHHHHHTEEEEE--EEEECCC
T ss_pred             hCCCCceEEEECCc--hHHHHHHHHHhcCCC--EEEEEec
Confidence            44446899999999  345556666665544  7888775

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.18  E-value=0.00085  Score=63.49  Aligned_cols=94  Identities=14%  Similarity=0.180  Sum_probs=58.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +|+|.|.    ||||++|+.+++.|++++|   +++.+.........        +. +....+.+...|++.    +.+
T Consensus         6 ~~kV~Ii----GAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~--------~~-~~g~~i~~~~~~~~~----~~~   68 (340)
T 2hjs_A            6 PLNVAVV----GATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR--------MG-FAESSLRVGDVDSFD----FSS   68 (340)
T ss_dssp             CCCEEEE----TTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE--------EE-ETTEEEECEEGGGCC----GGG
T ss_pred             CcEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc--------cc-cCCcceEEecCCHHH----hcC
Confidence            4789999    9999999999999997766   44555422111110        00 110111221112221    344


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                        +|+||.+.+  ......++..+.+.|++ +|-+|+..
T Consensus        69 --~DvV~~a~g--~~~s~~~a~~~~~aG~k-vId~Sa~~  102 (340)
T 2hjs_A           69 --VGLAFFAAA--AEVSRAHAERARAAGCS-VIDLSGAL  102 (340)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred             --CCEEEEcCC--cHHHHHHHHHHHHCCCE-EEEeCCCC
Confidence              599999987  45567888888899985 78788753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.13  E-value=0.00028  Score=67.68  Aligned_cols=100  Identities=20%  Similarity=0.263  Sum_probs=65.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ...++|+|+    |+ |.||+.+++.|...|++|++++|+.++...+        .......+..+..+.+++.+.+.+.
T Consensus       164 l~~~~V~Vi----Ga-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~--------~~~~g~~~~~~~~~~~~l~~~~~~~  230 (369)
T 2eez_A          164 VAPASVVIL----GG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYL--------DDVFGGRVITLTATEANIKKSVQHA  230 (369)
T ss_dssp             BCCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTTTSEEEEECCHHHHHHHHHHC
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH--------HHhcCceEEEecCCHHHHHHHHhCC
Confidence            345899999    98 9999999999999999999999987543211        1101112233444677888888765


Q ss_pred             cccEEEeCCCCChh-----hHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~-----~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                        |+||++++..-.     .....++.++..  ..+|.+++.
T Consensus       231 --DvVi~~~g~~~~~~~~li~~~~l~~mk~g--g~iV~v~~~  268 (369)
T 2eez_A          231 --DLLIGAVLVPGAKAPKLVTRDMLSLMKEG--AVIVDVAVD  268 (369)
T ss_dssp             --SEEEECCC-------CCSCHHHHTTSCTT--CEEEECC--
T ss_pred             --CEEEECCCCCccccchhHHHHHHHhhcCC--CEEEEEecC
Confidence              999999985421     134445544432  368888864

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.11  E-value=0.0045  Score=57.31  Aligned_cols=105  Identities=17%  Similarity=0.218  Sum_probs=65.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCc---ccchhcCCCeEEEc---CHhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEIVSAGGKTVWG---DPAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~---D~~~~~~  146 (401)
                      +.+||-++     |.|.+|..+++.|+++||+|++.+|++++.+.+.+.....   ..++.. ..+++..   |......
T Consensus         4 Ms~kIgfI-----GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~-~~dvvi~~l~~~~~~~~   77 (297)
T 4gbj_A            4 MSEKIAFL-----GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAIT-PGGIVFSVLADDAAVEE   77 (297)
T ss_dssp             CCCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCC-TTCEEEECCSSHHHHHH
T ss_pred             CCCcEEEE-----ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHh-cCCceeeeccchhhHHH
Confidence            34689999     7999999999999999999999999998877665433221   122221 2222222   3333333


Q ss_pred             hhcC-----C-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          147 VVGG-----V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       147 ~~~~-----~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      .+.+     . +-+++|++.......++.+.+.+++.|+ +|+-
T Consensus        78 v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~-~~ld  120 (297)
T 4gbj_A           78 LFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGA-HYVG  120 (297)
T ss_dssp             HSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred             HHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCC-ceec
Confidence            2211     1 1368889998899999999999999987 4663

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.09  E-value=0.0013  Score=63.85  Aligned_cols=92  Identities=16%  Similarity=0.252  Sum_probs=69.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~  149 (401)
                      .++|+|+    | -|.+|+.+++.|.++|++|++++++++...           .+...++.++.||   ++.+.++ +.
T Consensus         4 ~~~viIi----G-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~-----------~~~~~g~~vi~GDat~~~~L~~agi~   67 (413)
T 3l9w_A            4 GMRVIIA----G-FGRFGQITGRLLLSSGVKMVVLDHDPDHIE-----------TLRKFGMKVFYGDATRMDLLESAGAA   67 (413)
T ss_dssp             CCSEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECCHHHHH-----------HHHHTTCCCEESCTTCHHHHHHTTTT
T ss_pred             CCeEEEE----C-CCHHHHHHHHHHHHCCCCEEEEECCHHHHH-----------HHHhCCCeEEEcCCCCHHHHHhcCCC
Confidence            4789999    6 599999999999999999999999986443           3344588899999   4555555 44


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLF  184 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v~  184 (401)
                      .  .|+||-+.+. ......++..+++.+.+ ++|-
T Consensus        68 ~--A~~viv~~~~-~~~n~~i~~~ar~~~p~~~Iia  100 (413)
T 3l9w_A           68 K--AEVLINAIDD-PQTNLQLTEMVKEHFPHLQIIA  100 (413)
T ss_dssp             T--CSEEEECCSS-HHHHHHHHHHHHHHCTTCEEEE
T ss_pred             c--cCEEEECCCC-hHHHHHHHHHHHHhCCCCeEEE
Confidence            4  4999987764 55667778888887754 4443

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.08  E-value=0.0018  Score=61.44  Aligned_cols=96  Identities=16%  Similarity=0.073  Sum_probs=61.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ++||.|.    ||||+||+.+++.|.++.+ +++++.+......++..    .+..+.. ..+.+  .+.+   . +.+ 
T Consensus         4 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~----~~~~~~g~~~~~~--~~~~---~-~~~-   68 (345)
T 2ozp_A            4 KKTLSIV----GASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHF----VHPNLRGRTNLKF--VPPE---K-LEP-   68 (345)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGG----TCGGGTTTCCCBC--BCGG---G-CCC-
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHH----hCchhcCcccccc--cchh---H-hcC-
Confidence            5799999    9999999999999998765 77777664432221111    0111111 11111  1332   2 344 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                       +|+||.+.+..  ....++..+.+.|+ ++|-+|+.
T Consensus        69 -vDvV~~a~g~~--~s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           69 -ADILVLALPHG--VFAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             -CSEEEECCCTT--HHHHTHHHHHTTCS-EEEECSST
T ss_pred             -CCEEEEcCCcH--HHHHHHHHHHHCCC-EEEEcCcc
Confidence             59999998854  45677778888897 58888874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.07  E-value=0.00075  Score=63.61  Aligned_cols=97  Identities=20%  Similarity=0.227  Sum_probs=67.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~  146 (401)
                      ..+.+|||+    ||+|.||..+++.+...|.+|+++++++++.+..           ...+.+ ++.. +   .+.+.+
T Consensus       147 ~~g~~vlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~ga~~~~~~~~~~~~~~~~~  211 (334)
T 3qwb_A          147 KKGDYVLLF----AAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-----------KEYGAEYLINASKEDILRQVLK  211 (334)
T ss_dssp             CTTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCcEEEeCCCchHHHHHHH
Confidence            346799999    9999999999999999999999999977544321           111222 2222 2   344444


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ...+.++|+||+++|.  ......++.++..|  ++|.++.
T Consensus       212 ~~~~~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~G~  248 (334)
T 3qwb_A          212 FTNGKGVDASFDSVGK--DTFEISLAALKRKG--VFVSFGN  248 (334)
T ss_dssp             HTTTSCEEEEEECCGG--GGHHHHHHHEEEEE--EEEECCC
T ss_pred             HhCCCCceEEEECCCh--HHHHHHHHHhccCC--EEEEEcC
Confidence            5445568999999985  55566666665555  6887764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.06  E-value=0.00064  Score=64.36  Aligned_cols=97  Identities=20%  Similarity=0.238  Sum_probs=66.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~  147 (401)
                      .+++|||+    |++|.+|..+++.+...|++|+++++++++.+.++        .+   +.+ ++.. +   .+.+.++
T Consensus       166 ~g~~vlV~----Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~--------~~---ga~~~~d~~~~~~~~~~~~~  230 (343)
T 2eih_A          166 PGDDVLVM----AAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK--------AL---GADETVNYTHPDWPKEVRRL  230 (343)
T ss_dssp             TTCEEEEC----STTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HH---TCSEEEETTSTTHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hc---CCCEEEcCCcccHHHHHHHH
Confidence            46799999    99999999999999999999999999775443211        11   222 2221 2   2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+.++|+||+++|.  ......++.++..|  ++|.+++.
T Consensus       231 ~~~~~~d~vi~~~g~--~~~~~~~~~l~~~G--~~v~~g~~  267 (343)
T 2eih_A          231 TGGKGADKVVDHTGA--LYFEGVIKATANGG--RIAIAGAS  267 (343)
T ss_dssp             TTTTCEEEEEESSCS--SSHHHHHHHEEEEE--EEEESSCC
T ss_pred             hCCCCceEEEECCCH--HHHHHHHHhhccCC--EEEEEecC
Confidence            444468999999993  44566677766655  78887753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.03  E-value=0.00052  Score=65.34  Aligned_cols=96  Identities=13%  Similarity=0.114  Sum_probs=64.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~  147 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+.+        ..+   +.+ ++.. +   .+.+.+.
T Consensus       162 ~g~~vlV~----Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~--------~~~---g~~~~~~~~~~~~~~~~~~~  226 (354)
T 2j8z_A          162 AGDYVLIH----AGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA--------EKL---GAAAGFNYKKEDFSEATLKF  226 (354)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHH---TCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--------HHc---CCcEEEecCChHHHHHHHHH
Confidence            46789999    9999999999999999999999999887544321        111   222 2211 2   2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+.++|+||+++|..  .....++.++..|  ++|.++.
T Consensus       227 ~~~~~~d~vi~~~G~~--~~~~~~~~l~~~G--~iv~~G~  262 (354)
T 2j8z_A          227 TKGAGVNLILDCIGGS--YWEKNVNCLALDG--RWVLYGL  262 (354)
T ss_dssp             TTTSCEEEEEESSCGG--GHHHHHHHEEEEE--EEEECCC
T ss_pred             hcCCCceEEEECCCch--HHHHHHHhccCCC--EEEEEec
Confidence            4444589999999963  4455566665544  6887764

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.01  E-value=0.0023  Score=60.94  Aligned_cols=102  Identities=19%  Similarity=0.169  Sum_probs=61.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCc-ccCCCCCCCccc--c--hhcCCCeEEEcCHhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENS-DKMKKPPFNRFN--E--IVSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~--~--l~~~~~~~~~~D~~~~~~~  147 (401)
                      ++||.|.    ||+|++|+.+++.|++++ .+|+++.++.... ..+... ...+.  .  .....+.+...|+++   +
T Consensus         8 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~   79 (354)
T 1ys4_A            8 KIKVGVL----GATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDA-CYWFQDRDIPENIKDMVVIPTDPKH---E   79 (354)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHH-SCCCCSSCCCHHHHTCBCEESCTTS---G
T ss_pred             cceEEEE----CcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHh-cccccccccccCceeeEEEeCCHHH---H
Confidence            4699999    999999999999998875 5888887643221 111000 00000  0  000122222224333   3


Q ss_pred             hc-CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VG-GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~-~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ++ +  +|+||.+.+  ......++..+.+.|++ +|-.|+.
T Consensus        80 ~~~~--~DvV~~atp--~~~~~~~a~~~~~aG~~-VId~s~~  116 (354)
T 1ys4_A           80 EFED--VDIVFSALP--SDLAKKFEPEFAKEGKL-IFSNASA  116 (354)
T ss_dssp             GGTT--CCEEEECCC--HHHHHHHHHHHHHTTCE-EEECCST
T ss_pred             hcCC--CCEEEECCC--chHHHHHHHHHHHCCCE-EEECCch
Confidence            34 4  599999987  45566778888888874 7777764

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.01  E-value=0.0087  Score=53.95  Aligned_cols=112  Identities=18%  Similarity=0.180  Sum_probs=72.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT  136 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~  136 (401)
                      ....+|+|+    |+ |.+|+++++.|...|. ++++++++.-....+..+......++.              .+.+++
T Consensus        26 l~~~~Vlvv----G~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v  100 (251)
T 1zud_1           26 LLDSQVLII----GL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQL  100 (251)
T ss_dssp             HHTCEEEEE----CC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred             HhcCcEEEE----cc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEE
Confidence            346799999    65 6699999999999997 788887766433333322111111111              123333


Q ss_pred             EEc----CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       137 ~~~----D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      ...    +.+.+.+++.++  |+||++.. +...-..+-++|.+.++. +|+.+..+.+|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~--DvVi~~~d-~~~~r~~l~~~~~~~~~p-~i~~~~~g~~G  156 (251)
T 1zud_1          101 TALQQRLTGEALKDAVARA--DVVLDCTD-NMATRQEINAACVALNTP-LITASAVGFGG  156 (251)
T ss_dssp             EEECSCCCHHHHHHHHHHC--SEEEECCS-SHHHHHHHHHHHHHTTCC-EEEEEEEBTEE
T ss_pred             EEEeccCCHHHHHHHHhcC--CEEEECCC-CHHHHHHHHHHHHHhCCC-EEEEeccccce
Confidence            322    356677777765  99999876 566666777788888874 88877665554

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.00  E-value=0.0012  Score=60.42  Aligned_cols=95  Identities=15%  Similarity=0.176  Sum_probs=59.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .+|||.|+    |++|.+|+.+++.+.+ .|++++++. ++.+.......   ..+..+...++.+ .   ++++.++.+
T Consensus         4 ~~mkV~V~----Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~---~~~~g~~~~~v~~-~---~dl~~~l~~   72 (273)
T 1dih_A            4 ANIRVAIA----GAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDA---GELAGAGKTGVTV-Q---SSLDAVKDD   72 (273)
T ss_dssp             CBEEEEET----TTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCT---TCSSSSSCCSCCE-E---SCSTTTTTS
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhH---HHHcCCCcCCcee-c---CCHHHHhcC
Confidence            35799999    9999999999999885 478887554 44322110000   0011111112222 2   334455554


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                        +|+||+++.  ...+..++++|.++|+. +|
T Consensus        73 --~DvVIDft~--p~~~~~~~~~a~~~G~~-vV  100 (273)
T 1dih_A           73 --FDVFIDFTR--PEGTLNHLAFCRQHGKG-MV  100 (273)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTCE-EE
T ss_pred             --CCEEEEcCC--hHHHHHHHHHHHhCCCC-EE
Confidence              599999885  56788899999999974 44

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.98  E-value=0.0012  Score=62.56  Aligned_cols=96  Identities=16%  Similarity=0.240  Sum_probs=62.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EE-EcC----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGD----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~D----~~~~~~  146 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+..+           ..+.. ++ ..|    .+.+.+
T Consensus       169 ~g~~vlV~----Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-----------~~g~~~~~d~~~~~~~~~~~~~  233 (347)
T 2hcy_A          169 AGHWVAIS----GAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-----------SIGGEVFIDFTKEKDIVGAVLK  233 (347)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-----------HTTCCEEEETTTCSCHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-----------HcCCceEEecCccHhHHHHHHH
Confidence            46799999    99999999999999999999999998875443211           11222 12 121    233444


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +..+ ++|+||++++.. ......++.++..|  ++|.+++
T Consensus       234 ~~~~-~~D~vi~~~g~~-~~~~~~~~~l~~~G--~iv~~g~  270 (347)
T 2hcy_A          234 ATDG-GAHGVINVSVSE-AAIEASTRYVRANG--TTVLVGM  270 (347)
T ss_dssp             HHTS-CEEEEEECSSCH-HHHHHHTTSEEEEE--EEEECCC
T ss_pred             HhCC-CCCEEEECCCcH-HHHHHHHHHHhcCC--EEEEEeC
Confidence            4444 689999998841 23333444443333  7888775

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.0011  Score=63.00  Aligned_cols=96  Identities=13%  Similarity=0.189  Sum_probs=63.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~  147 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+..+           ..+.. ++.. +   .+.+.+.
T Consensus       170 ~g~~vlV~----GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----------~~ga~~~~d~~~~~~~~~~~~~  234 (351)
T 1yb5_A          170 AGESVLVH----GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-----------QNGAHEVFNHREVNYIDKIKKY  234 (351)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTCSEEEETTSTTHHHHHHHH
T ss_pred             CcCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----------HcCCCEEEeCCCchHHHHHHHH
Confidence            46799999    99999999999999999999999998875443211           11222 2211 2   2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+.++|+||+++|.  ......++.++..|  ++|.++.
T Consensus       235 ~~~~~~D~vi~~~G~--~~~~~~~~~l~~~G--~iv~~g~  270 (351)
T 1yb5_A          235 VGEKGIDIIIEMLAN--VNLSKDLSLLSHGG--RVIVVGS  270 (351)
T ss_dssp             HCTTCEEEEEESCHH--HHHHHHHHHEEEEE--EEEECCC
T ss_pred             cCCCCcEEEEECCCh--HHHHHHHHhccCCC--EEEEEec
Confidence            444468999999984  23344445554444  6887763

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.97  E-value=0.0021  Score=58.72  Aligned_cols=95  Identities=15%  Similarity=0.113  Sum_probs=60.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      +.|+||.|+    |++|.+|+.+++.+.+. ++++++. +|..+........   .+..+. .++.+    .+++++++.
T Consensus         5 M~mikV~V~----Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~g---el~g~~-~gv~v----~~dl~~ll~   72 (272)
T 4f3y_A            5 MSSMKIAIA----GASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAG---AFLGKQ-TGVAL----TDDIERVCA   72 (272)
T ss_dssp             -CCEEEEES----STTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTT---TTTTCC-CSCBC----BCCHHHHHH
T ss_pred             ccccEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHH---HHhCCC-CCcee----cCCHHHHhc
Confidence            457899999    99999999999999876 6677764 5554321110000   000011 12221    234555555


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +  +|+||++..  ...+...++.|.+.|+ ++|
T Consensus        73 ~--~DVVIDfT~--p~a~~~~~~~al~~G~-~vV  101 (272)
T 4f3y_A           73 E--ADYLIDFTL--PEGTLVHLDAALRHDV-KLV  101 (272)
T ss_dssp             H--CSEEEECSC--HHHHHHHHHHHHHHTC-EEE
T ss_pred             C--CCEEEEcCC--HHHHHHHHHHHHHcCC-CEE
Confidence            4  599999974  6677788889999997 455

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.95  E-value=0.0022  Score=60.37  Aligned_cols=99  Identities=18%  Similarity=0.135  Sum_probs=62.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCC---CCcccCCCCCCCcccchhcC-CCeEEEc-CHhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSA-GGKTVWG-DPAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~---~~~~~~~~~~~~~~~~l~~~-~~~~~~~-D~~~~~~~  147 (401)
                      |+||.|+    |+||++|+.+++.|.++ ++++..+....   .....+..    .+..+... .+.+... |.+   .+
T Consensus         4 M~kv~Iv----GatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~----~~p~~~~~~~~~v~~~~~~~---~~   72 (337)
T 3dr3_A            4 MLNTLIV----GASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISD----LHPQLKGIVELPLQPMSDIS---EF   72 (337)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHH----HCGGGTTTCCCBEEEESSGG---GT
T ss_pred             ceEEEEE----CCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHH----hCccccCccceeEeccCCHH---HH
Confidence            6899999    99999999999999985 56887776544   22111110    01112211 2333322 333   22


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      ..+  +|+||.+.+  -.....++..+.+.|+ ++|-+|+.
T Consensus        73 ~~~--~Dvvf~a~p--~~~s~~~~~~~~~~g~-~vIDlSa~  108 (337)
T 3dr3_A           73 SPG--VDVVFLATA--HEVSHDLAPQFLEAGC-VVFDLSGA  108 (337)
T ss_dssp             CTT--CSEEEECSC--HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             hcC--CCEEEECCC--hHHHHHHHHHHHHCCC-EEEEcCCc
Confidence            244  499998876  4556777887888898 58888875

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.95  E-value=0.001  Score=62.97  Aligned_cols=96  Identities=22%  Similarity=0.300  Sum_probs=63.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D---~~~~~~~~  148 (401)
                      .+.+|||+    ||+|.||..+++.+...|++|++++++.++.+.++        ++   +.+ ++..+   .+.+.+..
T Consensus       159 ~g~~VlV~----Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~~---ga~~v~~~~~~~~~~v~~~~  223 (342)
T 4eye_A          159 AGETVLVL----GAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK--------SV---GADIVLPLEEGWAKAVREAT  223 (342)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--------HH---TCSEEEESSTTHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------hc---CCcEEecCchhHHHHHHHHh
Confidence            46799999    99999999999999999999999999876543221        11   222 22222   33444454


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .+.++|+||+++|..  .....++.++..|  ++|.++.
T Consensus       224 ~~~g~Dvvid~~g~~--~~~~~~~~l~~~G--~iv~~G~  258 (342)
T 4eye_A          224 GGAGVDMVVDPIGGP--AFDDAVRTLASEG--RLLVVGF  258 (342)
T ss_dssp             TTSCEEEEEESCC----CHHHHHHTEEEEE--EEEEC--
T ss_pred             CCCCceEEEECCchh--HHHHHHHhhcCCC--EEEEEEc
Confidence            555689999999963  3444555554444  6887764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.94  E-value=0.0065  Score=54.73  Aligned_cols=111  Identities=17%  Similarity=0.233  Sum_probs=71.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCccc------------chh--cCCCe--
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFN------------EIV--SAGGK--  135 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~------------~l~--~~~~~--  135 (401)
                      ..++|+|+    | .|.+|+.+++.|...|. +|++++++.-....+..+......            .+.  .+.++  
T Consensus        30 ~~~~VlVv----G-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~  104 (249)
T 1jw9_B           30 KDSRVLIV----G-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAIT  104 (249)
T ss_dssp             HHCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hCCeEEEE----e-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEE
Confidence            45899999    6 58899999999999997 899999887333222222111111            111  12333  


Q ss_pred             EEEc--CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          136 TVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       136 ~~~~--D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      .+..  +.+++.+.+.++  |+||++.. +...-..+.++|++.++. +|+.+..+.+|
T Consensus       105 ~~~~~~~~~~~~~~~~~~--DvVi~~~d-~~~~~~~l~~~~~~~~~p-~i~~~~~g~~g  159 (249)
T 1jw9_B          105 PVNALLDDAELAALIAEH--DLVLDCTD-NVAVRNQLNAGCFAAKVP-LVSGAAIRMEG  159 (249)
T ss_dssp             EECSCCCHHHHHHHHHTS--SEEEECCS-SHHHHHHHHHHHHHHTCC-EEEEEEEBTEE
T ss_pred             EEeccCCHhHHHHHHhCC--CEEEEeCC-CHHHHHHHHHHHHHcCCC-EEEeeeccceE
Confidence            3332  345667777775  99999875 466666777888888874 77766554443

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.94  E-value=0.00057  Score=64.20  Aligned_cols=97  Identities=16%  Similarity=0.146  Sum_probs=65.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~  146 (401)
                      ..+++|||+    ||+|.||..+++.+...|++|+++++++++.+.++        ++   +.. ++.. +   .+.+.+
T Consensus       139 ~~g~~VlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~~---Ga~~~~~~~~~~~~~~~~~  203 (325)
T 3jyn_A          139 KPGEIILFH----AAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK--------AL---GAWETIDYSHEDVAKRVLE  203 (325)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH--------HH---TCSEEEETTTSCHHHHHHH
T ss_pred             CCCCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------Hc---CCCEEEeCCCccHHHHHHH
Confidence            346799999    99999999999999999999999998775543211        11   222 2222 2   344445


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ...+.++|+||+++|.  ......++.++..|  ++|.++.
T Consensus       204 ~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G--~iv~~g~  240 (325)
T 3jyn_A          204 LTDGKKCPVVYDGVGQ--DTWLTSLDSVAPRG--LVVSFGN  240 (325)
T ss_dssp             HTTTCCEEEEEESSCG--GGHHHHHTTEEEEE--EEEECCC
T ss_pred             HhCCCCceEEEECCCh--HHHHHHHHHhcCCC--EEEEEec
Confidence            5555568999999985  44445555554444  6887764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.92  E-value=0.00053  Score=65.27  Aligned_cols=96  Identities=15%  Similarity=0.129  Sum_probs=62.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~~  148 (401)
                      ++|||+    ||+|.||..+++.+...|+ +|++++++.++...+..       .   .+.. ++.. |   .+.+.+..
T Consensus       162 ~~vlI~----GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~-------~---~g~~~~~d~~~~~~~~~~~~~~  227 (357)
T 2zb4_A          162 KTMVVS----GAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS-------E---LGFDAAINYKKDNVAEQLRESC  227 (357)
T ss_dssp             CEEEES----STTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-------T---SCCSEEEETTTSCHHHHHHHHC
T ss_pred             cEEEEE----CCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH-------H---cCCceEEecCchHHHHHHHHhc
Confidence            899999    9999999999999999999 99999987654332111       0   1222 2211 2   23344443


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      .+ ++|+||+++|.  ......++.++..|  ++|.++...
T Consensus       228 ~~-~~d~vi~~~G~--~~~~~~~~~l~~~G--~iv~~G~~~  263 (357)
T 2zb4_A          228 PA-GVDVYFDNVGG--NISDTVISQMNENS--HIILCGQIS  263 (357)
T ss_dssp             TT-CEEEEEESCCH--HHHHHHHHTEEEEE--EEEECCCGG
T ss_pred             CC-CCCEEEECCCH--HHHHHHHHHhccCc--EEEEECCcc
Confidence            44 68999999983  34444455444444  788877643

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.92  E-value=0.00054  Score=65.46  Aligned_cols=97  Identities=20%  Similarity=0.151  Sum_probs=65.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcCH----hhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDP----AEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D~----~~~~~~  147 (401)
                      .+.+|||+    ||+|.||..+++.+...|++|+++++++++.+.+           ...+.+. +..+.    +.+.+.
T Consensus       163 ~g~~VlV~----Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~Ga~~~~~~~~~~~~~~~~~~  227 (362)
T 2c0c_A          163 EGKKVLVT----AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL-----------KSLGCDRPINYKTEPVGTVLKQE  227 (362)
T ss_dssp             TTCEEEET----TTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-----------HHcCCcEEEecCChhHHHHHHHh
Confidence            46799999    9999999999999999999999999876543321           1113322 22221    223222


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                       .+.++|+||++++.  ......++.++..|  ++|.+++..
T Consensus       228 -~~~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~g~~~  264 (362)
T 2c0c_A          228 -YPEGVDVVYESVGG--AMFDLAVDALATKG--RLIVIGFIS  264 (362)
T ss_dssp             -CTTCEEEEEECSCT--HHHHHHHHHEEEEE--EEEECCCGG
T ss_pred             -cCCCCCEEEECCCH--HHHHHHHHHHhcCC--EEEEEeCCC
Confidence             23358999999985  45555666665555  799888654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.87  E-value=0.00069  Score=63.91  Aligned_cols=101  Identities=17%  Similarity=0.186  Sum_probs=65.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D---~~~~~~  146 (401)
                      ..+++|||+    ||+|.||..+++.+...|++|++++|++++.+.+.          ...+.. ++. .|   .+.+.+
T Consensus       148 ~~g~~vlI~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~  213 (336)
T 4b7c_A          148 KNGETVVIS----GAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV----------EELGFDGAIDYKNEDLAAGLKR  213 (336)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----------HTTCCSEEEETTTSCHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----------HHcCCCEEEECCCHHHHHHHHH
Confidence            346899999    99999999999999999999999998876543220          111222 222 12   233333


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy  191 (401)
                      .. +.++|+||+++|.  ......++.++..|  ++|.++...-+
T Consensus       214 ~~-~~~~d~vi~~~g~--~~~~~~~~~l~~~G--~iv~~G~~~~~  253 (336)
T 4b7c_A          214 EC-PKGIDVFFDNVGG--EILDTVLTRIAFKA--RIVLCGAISQY  253 (336)
T ss_dssp             HC-TTCEEEEEESSCH--HHHHHHHTTEEEEE--EEEECCCGGGG
T ss_pred             hc-CCCceEEEECCCc--chHHHHHHHHhhCC--EEEEEeecccc
Confidence            33 3358999999984  33444444444433  78888765533

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.85  E-value=0.0014  Score=61.76  Aligned_cols=96  Identities=18%  Similarity=0.205  Sum_probs=60.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe--EEEcCHhh----HHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGDPAE----VGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~D~~~----~~~  146 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|+.++.+.++        .+   +..  +...|.++    +.+
T Consensus       145 ~g~~vlV~----Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~--------~~---g~~~~~d~~~~~~~~~~~~~  209 (333)
T 1v3u_A          145 GGETVLVS----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK--------QI---GFDAAFNYKTVNSLEEALKK  209 (333)
T ss_dssp             SSCEEEEE----STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HT---TCSEEEETTSCSCHHHHHHH
T ss_pred             CCCEEEEe----cCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hc---CCcEEEecCCHHHHHHHHHH
Confidence            46899999    99999999999999999999999998765443211        11   221  11112122    333


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +..+ ++|+||+++|.  ......++.++..|  ++|.++..
T Consensus       210 ~~~~-~~d~vi~~~g~--~~~~~~~~~l~~~G--~~v~~g~~  246 (333)
T 1v3u_A          210 ASPD-GYDCYFDNVGG--EFLNTVLSQMKDFG--KIAICGAI  246 (333)
T ss_dssp             HCTT-CEEEEEESSCH--HHHHHHHTTEEEEE--EEEECCCC
T ss_pred             HhCC-CCeEEEECCCh--HHHHHHHHHHhcCC--EEEEEecc
Confidence            3232 58999999984  22333333333333  78877754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.85  E-value=0.0015  Score=61.63  Aligned_cols=97  Identities=16%  Similarity=0.224  Sum_probs=64.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~  146 (401)
                      ..+.+|||+    ||+|.||..+++.+...|++|+++++++++.+.++        ++   +.+ ++.. +   .+.+.+
T Consensus       143 ~~g~~VlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~l---ga~~~~~~~~~~~~~~~~~  207 (340)
T 3gms_A          143 QRNDVLLVN----ACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL--------RL---GAAYVIDTSTAPLYETVME  207 (340)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH--------HH---TCSEEEETTTSCHHHHHHH
T ss_pred             CCCCEEEEe----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------hC---CCcEEEeCCcccHHHHHHH
Confidence            346799999    99999999999999999999999999886554221        11   232 2222 2   334444


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ...+.++|+||+++|..  .....++.++..|  ++|.++.
T Consensus       208 ~~~~~g~Dvvid~~g~~--~~~~~~~~l~~~G--~iv~~G~  244 (340)
T 3gms_A          208 LTNGIGADAAIDSIGGP--DGNELAFSLRPNG--HFLTIGL  244 (340)
T ss_dssp             HTTTSCEEEEEESSCHH--HHHHHHHTEEEEE--EEEECCC
T ss_pred             HhCCCCCcEEEECCCCh--hHHHHHHHhcCCC--EEEEEee
Confidence            54555689999999843  2333444443333  6887764

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.84  E-value=0.0018  Score=60.10  Aligned_cols=104  Identities=17%  Similarity=0.229  Sum_probs=73.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC---cccchhcCCCeEE---EcCHhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVSAGGKTV---WGDPAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~l~~~~~~~~---~~D~~~~~~  146 (401)
                      .|+||-++     |.|.+|..+++.|++.||+|++.+|++++.+.+......   ...++. ...+++   ..|.+.+++
T Consensus         2 ~M~kIgfI-----GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~-~~~dvv~~~l~~~~~v~~   75 (300)
T 3obb_A            2 HMKQIAFI-----GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV-QGADVVISMLPASQHVEG   75 (300)
T ss_dssp             -CCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH-TTCSEEEECCSCHHHHHH
T ss_pred             CcCEEEEe-----eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHH-hcCCceeecCCchHHHHH
Confidence            47899999     799999999999999999999999998766544322111   112221 122222   235666776


Q ss_pred             hhcCC-------c-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          147 VVGGV-------T-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       147 ~~~~~-------~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      ++.+.       + =++||++.......++.+.+.+++.|+ +||
T Consensus        76 V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~-~~l  119 (300)
T 3obb_A           76 LYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL-AML  119 (300)
T ss_dssp             HHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            65431       1 268889999999999999999999997 566

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.83  E-value=0.0021  Score=60.61  Aligned_cols=93  Identities=14%  Similarity=0.086  Sum_probs=60.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC---CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      |+||.|.    ||+|++|+.+++.|++++   .+++++.........+        . +....+.+...|++    .+.+
T Consensus         3 ~~kV~I~----GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~--------~-~~~~~i~~~~~~~~----~~~~   65 (336)
T 2r00_A            3 QFNVAIF----GATGAVGETMLEVLQEREFPVDELFLLASERSEGKTY--------R-FNGKTVRVQNVEEF----DWSQ   65 (336)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEE--------E-ETTEEEEEEEGGGC----CGGG
T ss_pred             ccEEEEE----CCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCce--------e-ecCceeEEecCChH----HhcC
Confidence            6899999    999999999999999984   3666665322111110        1 11112222222222    2334


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                        +|+||.+.+  .......+..+.+.|+ ++|-+|+.
T Consensus        66 --vDvVf~a~g--~~~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           66 --VHIALFSAG--GELSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             --CCEEEECCC--chHHHHHHHHHHHcCC-EEEEcCCc
Confidence              599999987  4456778888888898 58888875

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.81  E-value=0.0019  Score=60.97  Aligned_cols=89  Identities=16%  Similarity=0.204  Sum_probs=66.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~  149 (401)
                      .++|+|.    |+ |.+|+.+++.|.++|+ |++++++++..           . +...++.++.||   ++.+.++ ++
T Consensus       115 ~~~viI~----G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~-----------~-~~~~~~~~i~gd~~~~~~L~~a~i~  176 (336)
T 1lnq_A          115 SRHVVIC----GW-SESTLECLRELRGSEV-FVLAEDENVRK-----------K-VLRSGANFVHGDPTRVSDLEKANVR  176 (336)
T ss_dssp             -CEEEEE----SC-CHHHHHHHTTGGGSCE-EEEESCGGGHH-----------H-HHHTTCEEEESCTTSHHHHHHTCST
T ss_pred             cCCEEEE----CC-cHHHHHHHHHHHhCCc-EEEEeCChhhh-----------h-HHhCCcEEEEeCCCCHHHHHhcChh
Confidence            4689999    75 9999999999999999 99998887543           2 334588999999   4555555 44


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFL  183 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v  183 (401)
                      +  .|.|+-+.+.+ .....++..+++.+.+ +++
T Consensus       177 ~--a~~vi~~~~~d-~~n~~~~~~ar~~~~~~~ii  208 (336)
T 1lnq_A          177 G--ARAVIVDLESD-SETIHCILGIRKIDESVRII  208 (336)
T ss_dssp             T--EEEEEECCSSH-HHHHHHHHHHHTTCTTSEEE
T ss_pred             h--ccEEEEcCCcc-HHHHHHHHHHHHHCCCCeEE
Confidence            4  59999877643 5566677788888765 544

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.76  E-value=0.0015  Score=62.24  Aligned_cols=86  Identities=19%  Similarity=0.208  Sum_probs=56.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHH-hCCCeEEEEecCCCCcccCCCCC-------CCcccchhcCCCeEEEcC---H
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPP-------FNRFNEIVSAGGKTVWGD---P  141 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~D---~  141 (401)
                      ..|+||||    ||+..+|.+++..|. ..|..|+++.+..+...+.....       +.+..+-.......+.+|   .
T Consensus        49 ~pK~vLVt----GaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           49 APKNVLVL----GCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD  124 (401)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence            46899999    999999999999998 67999999998776554311100       000111122345677787   4


Q ss_pred             hhHHHhhcC----C-cccEEEeCCCC
Q 015746          142 AEVGNVVGG----V-TFDVVLDNNGK  162 (401)
Q Consensus       142 ~~~~~~~~~----~-~~d~Vv~~a~~  162 (401)
                      +.+.++++.    . ++|++||+++.
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEeccc
Confidence            444444332    2 48999999884

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.75  E-value=0.0013  Score=62.47  Aligned_cols=95  Identities=22%  Similarity=0.220  Sum_probs=64.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~  147 (401)
                      .+++|||+    ||+|.||..+++.+...|++|+++++++++.+.++        ++   +.. ++.. +   .+.+.+.
T Consensus       167 ~g~~VlV~----Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~l---Ga~~~~~~~~~~~~~~~~~~  231 (353)
T 4dup_A          167 EGESVLIH----GGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE--------RL---GAKRGINYRSEDFAAVIKAE  231 (353)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HH---TCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------hc---CCCEEEeCCchHHHHHHHHH
Confidence            46799999    99999999999999999999999998876543221        11   222 2222 2   2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      . +.++|+||+++|..  .....++.++..|  +++.++.
T Consensus       232 ~-~~g~Dvvid~~g~~--~~~~~~~~l~~~G--~iv~~g~  266 (353)
T 4dup_A          232 T-GQGVDIILDMIGAA--YFERNIASLAKDG--CLSIIAF  266 (353)
T ss_dssp             H-SSCEEEEEESCCGG--GHHHHHHTEEEEE--EEEECCC
T ss_pred             h-CCCceEEEECCCHH--HHHHHHHHhccCC--EEEEEEe
Confidence            4 44689999999853  4444555554444  6887764

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.75  E-value=0.0052  Score=57.23  Aligned_cols=107  Identities=18%  Similarity=0.228  Sum_probs=66.2

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC---cccch-hcCCCeEEEc-CHhhHH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEI-VSAGGKTVWG-DPAEVG  145 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~l-~~~~~~~~~~-D~~~~~  145 (401)
                      ...||+|.|+     |.|.+|..+++.|++.||+|++.+|++++...+......   ...+. ...++.++-. ++..+.
T Consensus        18 ~~~m~~I~iI-----G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~   92 (310)
T 3doj_A           18 GSHMMEVGFL-----GLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAAL   92 (310)
T ss_dssp             CCCSCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHH
T ss_pred             cccCCEEEEE-----CccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHH
Confidence            3457899999     689999999999999999999999998765543221111   11111 1122222222 334444


Q ss_pred             Hhh---cC----C-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          146 NVV---GG----V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       146 ~~~---~~----~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      .++   .+    . +-.+||++..........+.+.+.+.|+ +|+
T Consensus        93 ~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~-~~v  137 (310)
T 3doj_A           93 SVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG-RFV  137 (310)
T ss_dssp             HHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            444   21    1 1256777777777777777777777665 344

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.73  E-value=0.0068  Score=57.65  Aligned_cols=94  Identities=17%  Similarity=0.145  Sum_probs=59.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCe---EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +++|.|+    ||||++|+.+++.|.+++|.   +..+.-.......        +. +....+.+...|.++    +.+
T Consensus         2 ~~kVaIv----GATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~--------~~-~~~~~~~~~~~~~~~----~~~   64 (366)
T 3pwk_A            2 GYTVAVV----GATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKS--------LK-FKDQDITIEETTETA----FEG   64 (366)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCE--------EE-ETTEEEEEEECCTTT----TTT
T ss_pred             CcEEEEE----CCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCc--------ce-ecCCCceEeeCCHHH----hcC
Confidence            5799999    99999999999999998763   3444322211111        11 111122222223322    344


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                        +|+||.+.+  -......+..+.+.|+ ++|=+|+..
T Consensus        65 --~Dvvf~a~~--~~~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           65 --VDIALFSAG--SSTSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             --CCEEEECCC--hHhHHHHHHHHHHCCC-EEEEcCCcc
Confidence              599999987  4566777887888898 588888753

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.70  E-value=0.0024  Score=60.54  Aligned_cols=94  Identities=13%  Similarity=0.162  Sum_probs=63.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~~~~  149 (401)
                      ++|||+    ||+|.||...++.+...|.+|+++++++++.+.++        ++   +.+ ++..+    .+.+.++..
T Consensus       166 ~~vli~----gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--------~~---Ga~~~~~~~~~~~~~~v~~~~~  230 (349)
T 3pi7_A          166 KAFVMT----AGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK--------DI---GAAHVLNEKAPDFEATLREVMK  230 (349)
T ss_dssp             SEEEES----STTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH--------HH---TCSEEEETTSTTHHHHHHHHHH
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------Hc---CCCEEEECCcHHHHHHHHHHhc
Confidence            789999    99999999999999999999999998876543221        11   332 22222    233333433


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +.++|+||+++|..  .....++.++..|  ++|.++.
T Consensus       231 ~~g~D~vid~~g~~--~~~~~~~~l~~~G--~iv~~G~  264 (349)
T 3pi7_A          231 AEQPRIFLDAVTGP--LASAIFNAMPKRA--RWIIYGR  264 (349)
T ss_dssp             HHCCCEEEESSCHH--HHHHHHHHSCTTC--EEEECCC
T ss_pred             CCCCcEEEECCCCh--hHHHHHhhhcCCC--EEEEEec
Confidence            33579999999843  3455666665544  7888764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.69  E-value=0.0013  Score=61.03  Aligned_cols=93  Identities=17%  Similarity=0.207  Sum_probs=62.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcCH-hhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDP-AEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D~-~~~~~~~~~  150 (401)
                      .+.+|||+    ||+|.+|..+++.+...|++|+++++++++.+..           ...+.+. +..+. +++.+.+. 
T Consensus       125 ~g~~vlV~----Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~ga~~~~~~~~~~~~~~~~~-  188 (302)
T 1iz0_A          125 PGEKVLVQ----AAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-----------LALGAEEAATYAEVPERAKAWG-  188 (302)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-----------HHTTCSEEEEGGGHHHHHHHTT-
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HhcCCCEEEECCcchhHHHHhc-
Confidence            46799999    9999999999999999999999999977654321           1123332 22222 44555453 


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       ++|+||+ +|.  ......++.++..|  +++.++.
T Consensus       189 -~~d~vid-~g~--~~~~~~~~~l~~~G--~~v~~g~  219 (302)
T 1iz0_A          189 -GLDLVLE-VRG--KEVEESLGLLAHGG--RLVYIGA  219 (302)
T ss_dssp             -SEEEEEE-CSC--TTHHHHHTTEEEEE--EEEEC--
T ss_pred             -CceEEEE-CCH--HHHHHHHHhhccCC--EEEEEeC
Confidence             4799999 876  34555555555544  6887764

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.65  E-value=0.0023  Score=56.30  Aligned_cols=67  Identities=21%  Similarity=0.276  Sum_probs=48.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      .+|+|.|+    | +|.+|+.+++.|.+.|++|++++|+.++...+           ...++...     ++.+++.++ 
T Consensus        27 ~~~~I~ii----G-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~-----------~~~g~~~~-----~~~~~~~~~-   84 (215)
T 2vns_A           27 EAPKVGIL----G-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL-----------FPSAAQVT-----FQEEAVSSP-   84 (215)
T ss_dssp             --CCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH-----------SBTTSEEE-----EHHHHTTSC-
T ss_pred             CCCEEEEE----c-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCcee-----cHHHHHhCC-
Confidence            46899999    7 89999999999999999999999987544322           11244432     345566665 


Q ss_pred             ccEEEeCCCC
Q 015746          153 FDVVLDNNGK  162 (401)
Q Consensus       153 ~d~Vv~~a~~  162 (401)
                       |+||.+...
T Consensus        85 -DvVi~av~~   93 (215)
T 2vns_A           85 -EVIFVAVFR   93 (215)
T ss_dssp             -SEEEECSCG
T ss_pred             -CEEEECCCh
Confidence             999988763

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.61  E-value=0.003  Score=60.19  Aligned_cols=97  Identities=14%  Similarity=0.215  Sum_probs=59.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC--HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D--~~~~~~~~~  149 (401)
                      +++||.|.    ||+|++|+.+++.|.++.+ +++++.+..+...++..    .+..+.  +..  ..|  ..+ .+.+.
T Consensus        15 ~~~kV~Ii----GAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~----~~~~~~--~~v--~~dl~~~~-~~~~~   81 (359)
T 1xyg_A           15 KDIRIGLL----GASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMES----VFPHLR--AQK--LPTLVSVK-DADFS   81 (359)
T ss_dssp             CCEEEEEE----CCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHH----HCGGGT--TSC--CCCCBCGG-GCCGG
T ss_pred             cCcEEEEE----CcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHH----hCchhc--Ccc--cccceecc-hhHhc
Confidence            34799999    9999999999999998864 78877654322211100    011111  110  011  111 33344


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +  +|+||.+.+.  ..+...+..+ +.|+ ++|-+|+.
T Consensus        82 ~--vDvVf~atp~--~~s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           82 T--VDAVFCCLPH--GTTQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             G--CSEEEECCCT--TTHHHHHHTS-CTTC-EEEECSST
T ss_pred             C--CCEEEEcCCc--hhHHHHHHHH-hCCC-EEEECCcc
Confidence            4  5999999874  3456677777 7887 58888874

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.58  E-value=0.013  Score=52.62  Aligned_cols=33  Identities=9%  Similarity=0.204  Sum_probs=28.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVG  111 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~  111 (401)
                      |||.|+    |++|.+|+.+++.+.+. |+++++....
T Consensus         1 mkV~V~----Ga~G~mG~~i~~~~~~~~~~elva~~d~   34 (245)
T 1p9l_A            1 MRVGVL----GAKGKVGTTMVRAVAAADDLTLSAELDA   34 (245)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence            589999    99999999999999876 8998876644

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.58  E-value=0.0084  Score=56.08  Aligned_cols=41  Identities=15%  Similarity=0.317  Sum_probs=35.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      ..+|+|.|+     |.|.+|..+++.|++.||+|++.+|++++.+.
T Consensus        29 ~~~~~I~iI-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~   69 (320)
T 4dll_A           29 PYARKITFL-----GTGSMGLPMARRLCEAGYALQVWNRTPARAAS   69 (320)
T ss_dssp             CCCSEEEEE-----CCTTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             cCCCEEEEE-----CccHHHHHHHHHHHhCCCeEEEEcCCHHHHHH
Confidence            356899999     67999999999999999999999998865543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.58  E-value=0.0074  Score=56.19  Aligned_cols=99  Identities=14%  Similarity=0.189  Sum_probs=63.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccch---hcCCCeEEE-cCHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVW-GDPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l---~~~~~~~~~-~D~~~~~~~~  148 (401)
                      +|||.|+    |+ |.+|..++..|+..|+ +|+++++++++.+....    .+.+.   .....++.. .|   + +.+
T Consensus         2 ~~kI~VI----Ga-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~----dl~~~~~~~~~~~~i~~t~d---~-~a~   68 (309)
T 1ur5_A            2 RKKISII----GA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKAL----DLYEASPIEGFDVRVTGTNN---Y-ADT   68 (309)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHH----HHHTTHHHHTCCCCEEEESC---G-GGG
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHH----hHHHhHhhcCCCeEEEECCC---H-HHH
Confidence            4799999    88 9999999999999997 98888887654432110    11110   111233332 33   3 457


Q ss_pred             cCCcccEEEeCCCCC--------------hhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKN--------------LDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~--------------~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +++  |+||.+++..              ....+.+.+.+.+.+.+.+|.+.|
T Consensus        69 ~~a--D~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           69 ANS--DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             TTC--SEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             CCC--CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            776  9999999742              344567777777776555555444

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.56  E-value=0.009  Score=48.58  Aligned_cols=87  Identities=26%  Similarity=0.281  Sum_probs=59.8

Q ss_pred             ccCeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ..++|.|+    |++   |.+|..+++.|++.||+|+.+++..+..                .++.++    .++.++.+
T Consensus        13 ~p~~IavI----GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~~~----~s~~el~~   68 (138)
T 1y81_A           13 EFRKIALV----GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLKCY----RSVRELPK   68 (138)
T ss_dssp             -CCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEECB----SSGGGSCT
T ss_pred             CCCeEEEE----eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCeeec----CCHHHhCC
Confidence            35789999    987   8999999999999999977766554211                122211    22233333


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .  +|+++-+..  -.....+++.|.+.|++.++..++
T Consensus        69 ~--vDlvii~vp--~~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           69 D--VDVIVFVVP--PKVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             T--CCEEEECSC--HHHHHHHHHHHHHTTCCEEEECTT
T ss_pred             C--CCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEcCc
Confidence            3  599888765  477788888888889987666553

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.54  E-value=0.0081  Score=56.97  Aligned_cols=98  Identities=18%  Similarity=0.117  Sum_probs=60.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCC-CCcccCCCCCCCcccch-------hcCCCeEEEcCHhhH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGD-ENSDKMKKPPFNRFNEI-------VSAGGKTVWGDPAEV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~-~~~~~~~~~~~~~~~~l-------~~~~~~~~~~D~~~~  144 (401)
                      ++||.|.    ||+|++|+.+++.|.++. .+|+++..+. .....+..    .+..+       ....+.+...|++. 
T Consensus         4 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~~~-   74 (350)
T 2ep5_A            4 KIKVSLL----GSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKD----AVKWIEQGDIPEEVQDLPIVSTNYED-   74 (350)
T ss_dssp             CEEEEEE----SCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHH----HCCCCSSSSCCHHHHTCBEECSSGGG-
T ss_pred             CcEEEEE----CcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHH----hcCcccccccccCCceeEEeeCCHHH-
Confidence            5789999    999999999999998874 4777775221 11111100    00000       01123332223333 


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                         +.+  +|+||.+.+  -.....++..+.+.|++ +|-.|+.
T Consensus        75 ---~~~--vDvVf~atp--~~~s~~~a~~~~~aG~~-VId~s~~  110 (350)
T 2ep5_A           75 ---HKD--VDVVLSALP--NELAESIELELVKNGKI-VVSNASP  110 (350)
T ss_dssp             ---GTT--CSEEEECCC--HHHHHHHHHHHHHTTCE-EEECSST
T ss_pred             ---hcC--CCEEEECCC--hHHHHHHHHHHHHCCCE-EEECCcc
Confidence               244  599998876  45677788888899985 7777764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.52  E-value=0.0012  Score=62.50  Aligned_cols=101  Identities=12%  Similarity=0.127  Sum_probs=66.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcCHhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D~~~~~~~  147 (401)
                      +.++||.|+    |++|+||+.++..|+..|  .+|++++.+.++......    .+.+.  ...++.+    ..++.+.
T Consensus         6 ~~~~KV~Vi----GaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~----DL~~~~~~~~~i~~----t~d~~~a   73 (343)
T 3fi9_A            6 LTEEKLTIV----GAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAE----EIRHCGFEGLNLTF----TSDIKEA   73 (343)
T ss_dssp             SCSSEEEEE----TTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHH----HHHHHCCTTCCCEE----ESCHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHH----hhhhCcCCCCceEE----cCCHHHH
Confidence            457899999    999999999999999998  489999987654322000    00110  0012221    2345566


Q ss_pred             hcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCE--EEEec
Q 015746          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ--FLFIS  186 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~--~v~~S  186 (401)
                      ++++  |+||.++|.              |....+.+++.+.+.+.+-  ++.+|
T Consensus        74 l~dA--DvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           74 LTDA--KYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             HTTE--EEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             hCCC--CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            7776  999999984              4566778888887776543  45555

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.50  E-value=0.0042  Score=58.72  Aligned_cols=95  Identities=19%  Similarity=0.239  Sum_probs=63.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+.+|||+    ||+|.||..+++.+...|.+|+++ +++++.+.           +...+...+..+   .+.+.+...
T Consensus       150 ~g~~VlV~----Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-----------~~~lGa~~i~~~~~~~~~~~~~~~  213 (343)
T 3gaz_A          150 DGQTVLIQ----GGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-----------VRDLGATPIDASREPEDYAAEHTA  213 (343)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-----------HHHHTSEEEETTSCHHHHHHHHHT
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-----------HHHcCCCEeccCCCHHHHHHHHhc
Confidence            46799999    999999999999999999999998 65543321           111233333322   334444555


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +.++|+||+++|.  ......++.++..|  ++|.++.
T Consensus       214 ~~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~g~  247 (343)
T 3gaz_A          214 GQGFDLVYDTLGG--PVLDASFSAVKRFG--HVVSCLG  247 (343)
T ss_dssp             TSCEEEEEESSCT--HHHHHHHHHEEEEE--EEEESCC
T ss_pred             CCCceEEEECCCc--HHHHHHHHHHhcCC--eEEEEcc
Confidence            5568999999984  34455555555444  6876654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.48  E-value=0.0026  Score=60.12  Aligned_cols=97  Identities=15%  Similarity=0.135  Sum_probs=61.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cC----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D----~~~~~~  146 (401)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+.++.          ..+.. ++. .+    .+.+.+
T Consensus       155 ~g~~vlI~----Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----------~~g~~~~~d~~~~~~~~~~~~~  220 (345)
T 2j3h_A          155 EGETVYVS----AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT----------KFGFDDAFNYKEESDLTAALKR  220 (345)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----------TSCCSEEEETTSCSCSHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCceEEecCCHHHHHHHHHH
Confidence            46799999    999999999999999999999999988754432210          11222 111 11    223333


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +. +.++|+||+++|.  ......++.++..|  ++|.++..
T Consensus       221 ~~-~~~~d~vi~~~g~--~~~~~~~~~l~~~G--~~v~~G~~  257 (345)
T 2j3h_A          221 CF-PNGIDIYFENVGG--KMLDAVLVNMNMHG--RIAVCGMI  257 (345)
T ss_dssp             HC-TTCEEEEEESSCH--HHHHHHHTTEEEEE--EEEECCCG
T ss_pred             Hh-CCCCcEEEECCCH--HHHHHHHHHHhcCC--EEEEEccc
Confidence            32 2358999999984  33344444444333  78877653

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.42  E-value=0.003  Score=58.03  Aligned_cols=79  Identities=20%  Similarity=0.301  Sum_probs=54.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      ||+|.|+    |+||.+|..+++.|.+.|++|++++|+++....+.           ..++..  .|   ..+++.++  
T Consensus        11 mm~I~iI----G~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g~~~--~~---~~~~~~~a--   68 (286)
T 3c24_A           11 PKTVAIL----GAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ-----------GMGIPL--TD---GDGWIDEA--   68 (286)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH-----------HTTCCC--CC---SSGGGGTC--
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------hcCCCc--CC---HHHHhcCC--
Confidence            5799999    98899999999999999999999998875443211           113222  12   23455555  


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHh
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      |+||-+...  ..+..+++.+..
T Consensus        69 DvVi~av~~--~~~~~v~~~l~~   89 (286)
T 3c24_A           69 DVVVLALPD--NIIEKVAEDIVP   89 (286)
T ss_dssp             SEEEECSCH--HHHHHHHHHHGG
T ss_pred             CEEEEcCCc--hHHHHHHHHHHH
Confidence            999988763  335666665544

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.40  E-value=0.036  Score=52.80  Aligned_cols=93  Identities=13%  Similarity=0.187  Sum_probs=57.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHH-hCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc-CHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELL-GSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D~~~~~~~~  148 (401)
                      |+||.|.    ||+|++|+.+++.|+ ++++   .++.+..+. ....+        ..+....+.+... |++++    
T Consensus         1 m~kVaIv----GAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v--------~~~~g~~i~~~~~~~~~~~----   63 (367)
T 1t4b_A            1 MQNVGFI----GWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAA--------PSFGGTTGTLQDAFDLEAL----   63 (367)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBC--------CGGGTCCCBCEETTCHHHH----
T ss_pred             CcEEEEE----CCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCc--------cccCCCceEEEecCChHHh----
Confidence            5799999    999999999999544 4554   455555432 11111        1122123444433 24443    


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v~~SS  187 (401)
                      .+  +|+||.+.+  .......+..+.+.|++ .+|=.|+
T Consensus        64 ~~--~DvVf~a~g--~~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           64 KA--LDIIVTCQG--GDYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             HT--CSEEEECSC--HHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             cC--CCEEEECCC--chhHHHHHHHHHHCCCCEEEEcCCh
Confidence            44  499999987  56677788888889985 3444444

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.40  E-value=0.002  Score=63.50  Aligned_cols=92  Identities=16%  Similarity=0.237  Sum_probs=64.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHh-h
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV-V  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~-~  148 (401)
                      .|||+|.     |.|-+|+++++.|.++||+|++++++++....           +. ..++.++.||   ++.+.++ +
T Consensus         3 ~M~iiI~-----G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~-----------~~~~~~~~~i~Gd~~~~~~L~~Agi   66 (461)
T 4g65_A            3 AMKIIIL-----GAGQVGGTLAENLVGENNDITIVDKDGDRLRE-----------LQDKYDLRVVNGHASHPDVLHEAGA   66 (461)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHH-----------HHHHSSCEEEESCTTCHHHHHHHTT
T ss_pred             cCEEEEE-----CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-----------HHHhcCcEEEEEcCCCHHHHHhcCC
Confidence            5899999     56999999999999999999999998865432           22 2378899999   5666665 4


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEE
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF  184 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~  184 (401)
                      +.  .|.+|-+.+. -.....+...|++. +.++.|-
T Consensus        67 ~~--ad~~ia~t~~-De~Nl~~~~~Ak~~~~~~~~ia  100 (461)
T 4g65_A           67 QD--ADMLVAVTNT-DETNMAACQVAFTLFNTPNRIA  100 (461)
T ss_dssp             TT--CSEEEECCSC-HHHHHHHHHHHHHHHCCSSEEE
T ss_pred             Cc--CCEEEEEcCC-hHHHHHHHHHHHHhcCCcccee
Confidence            44  4999876543 22233344556664 6665554

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.39  E-value=0.009  Score=54.86  Aligned_cols=100  Identities=20%  Similarity=0.198  Sum_probs=59.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC---cccch-hcCCCeEEEc-CHhhHHHhh-
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEI-VSAGGKTVWG-DPAEVGNVV-  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~l-~~~~~~~~~~-D~~~~~~~~-  148 (401)
                      |+|.|+     |.|.+|..+++.|.+.||+|++.+|++++...+......   .+.+. ...++-++-. ++..+..++ 
T Consensus         2 ~~i~iI-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~   76 (287)
T 3pef_A            2 QKFGFI-----GLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCF   76 (287)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CEEEEE-----eecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHc
Confidence            789999     579999999999999999999999998765543221111   11111 1112211111 133444443 


Q ss_pred             --cC----C-cccEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          149 --GG----V-TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       149 --~~----~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                        ++    . +-.+||++..........+.+.+++.|+
T Consensus        77 ~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~  114 (287)
T 3pef_A           77 GKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG  114 (287)
T ss_dssp             STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred             CcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence              11    1 1246667766666666666666666665

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.39  E-value=0.016  Score=56.63  Aligned_cols=149  Identities=14%  Similarity=0.155  Sum_probs=84.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE--cCHh----h
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPA----E  143 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D~~----~  143 (401)
                      +++|+|.    | .|.||+.+++.|+++ ++   +|++.+......+         +.+..  ++.+..  .|.+    .
T Consensus        13 ~~rVlII----G-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~---------~~~~~--g~~~~~~~Vdadnv~~~   76 (480)
T 2ph5_A           13 KNRFVIL----G-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD---------VAQQY--GVSFKLQQITPQNYLEV   76 (480)
T ss_dssp             CSCEEEE----C-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC---------HHHHH--TCEEEECCCCTTTHHHH
T ss_pred             CCCEEEE----C-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh---------HHhhc--CCceeEEeccchhHHHH
Confidence            4789999    6 999999999999987 44   6777765543321         11111  333333  3333    3


Q ss_pred             HHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCC
Q 015746          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS  223 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~  223 (401)
                      +.+++++  .|+|||++-  ......++++|.++|+ ++|  .++..   ................+.|.....+.+...
T Consensus        77 l~aLl~~--~DvVIN~s~--~~~~l~Im~acleaGv-~Yl--DTa~E---~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~  146 (480)
T 2ph5_A           77 IGSTLEE--NDFLIDVSI--GISSLALIILCNQKGA-LYI--NAATE---PWKEEFVMEKMALNRRTNYSLREEVLRLKD  146 (480)
T ss_dssp             TGGGCCT--TCEEEECCS--SSCHHHHHHHHHHHTC-EEE--ESSCC---CCCC----------CCCHHHHHHHHHTTTT
T ss_pred             HHHHhcC--CCEEEECCc--cccCHHHHHHHHHcCC-CEE--ECCCC---cccccccccccCcchhhhHHHHHHHHHHHH
Confidence            4557765  399999664  4467789999999997 454  33221   000011111111122356776666555432


Q ss_pred             CeEEEecCeeecCCCCCCcHHHHHHHHH
Q 015746          224 NWASFRPQYMIGSGNNKDCEEWFFDRIV  251 (401)
Q Consensus       224 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~  251 (401)
                      .+.-   ..|.|.+-++.+++.|....+
T Consensus       147 ~~~G---tAilg~G~nPGvvsvf~~~Al  171 (480)
T 2ph5_A          147 KTQK---TALITHGANPGLVSHFIKEAL  171 (480)
T ss_dssp             TCCS---CEECSCBTTTBHHHHHHHHHH
T ss_pred             hcCC---cEEecCCCCccHHHHHHHHHH
Confidence            2111   355677777888888775544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.38  E-value=0.0039  Score=59.44  Aligned_cols=98  Identities=18%  Similarity=0.295  Sum_probs=65.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ..++|+|+    |+ |.+|+.+++.|...|.+|++++|+.++.+.+        ..+....+.++..+.+++.+.+.++ 
T Consensus       166 ~~~~VlVi----Ga-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (361)
T 1pjc_A          166 KPGKVVIL----GG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL--------ETLFGSRVELLYSNSAEIETAVAEA-  231 (361)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGSEEEECCHHHHHHHHHTC-
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH--------HHhhCceeEeeeCCHHHHHHHHcCC-
Confidence            34799999    88 9999999999999999999999987654321        1111122334444566777777765 


Q ss_pred             ccEEEeCCCCChh-----hHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~-----~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       |+||++.+....     .....++.++..+  .++-++.
T Consensus       232 -DvVI~~~~~~~~~~~~li~~~~~~~~~~g~--~ivdv~~  268 (361)
T 1pjc_A          232 -DLLIGAVLVPGRRAPILVPASLVEQMRTGS--VIVDVAV  268 (361)
T ss_dssp             -SEEEECCCCTTSSCCCCBCHHHHTTSCTTC--EEEETTC
T ss_pred             -CEEEECCCcCCCCCCeecCHHHHhhCCCCC--EEEEEec
Confidence             999999875321     1333444443322  5776664

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.38  E-value=0.027  Score=50.35  Aligned_cols=97  Identities=11%  Similarity=0.248  Sum_probs=54.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEE-EecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc-C
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG-G  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~-~  150 (401)
                      .||||.|+    |+ |.+|+.+++.+.++++++++ ++|.........  ....+.++...++-+....++.....+. .
T Consensus         2 ~MmkI~Vi----Ga-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~--v~~dl~~l~~~DVvIDft~p~a~~~~~~l~   74 (243)
T 3qy9_A            2 ASMKILLI----GY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQ--QYQHIADVKGADVAIDFSNPNLLFPLLDED   74 (243)
T ss_dssp             -CCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSC--BCSCTTTCTTCSEEEECSCHHHHHHHHTSC
T ss_pred             CceEEEEE----Cc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCc--eeCCHHHHhCCCEEEEeCChHHHHHHHHHh
Confidence            47899999    99 99999999999999777666 455443211110  0111222222222222333555444442 2


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      .+.++|+...|.+-.....+.++|++
T Consensus        75 ~g~~vVigTTG~s~e~~~~l~~aa~~  100 (243)
T 3qy9_A           75 FHLPLVVATTGEKEKLLNKLDELSQN  100 (243)
T ss_dssp             CCCCEEECCCSSHHHHHHHHHHHTTT
T ss_pred             cCCceEeCCCCCCHHHHHHHHHHHhc
Confidence            24677777777654455556666554

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.37  E-value=0.011  Score=54.86  Aligned_cols=104  Identities=16%  Similarity=0.102  Sum_probs=64.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC----cccchhcCCCeEEEcC---HhhHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN----RFNEIVSAGGKTVWGD---PAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~D---~~~~~  145 (401)
                      ++|+|.|+     |.|.+|..+++.|++.||+|++.+|++++.+.+......    .+.+.. .+.+++..-   ...+.
T Consensus         6 ~~~~I~iI-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~-~~aDvvi~~vp~~~~~~   79 (303)
T 3g0o_A            6 TDFHVGIV-----GLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFA-GVVDALVILVVNAAQVR   79 (303)
T ss_dssp             -CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTT-TTCSEEEECCSSHHHHH
T ss_pred             CCCeEEEE-----CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHH-hcCCEEEEECCCHHHHH
Confidence            45799999     689999999999999999999999987654432221111    111111 122333222   33455


Q ss_pred             Hhh---cCC----c-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          146 NVV---GGV----T-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       146 ~~~---~~~----~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      .++   ++.    + -.+||++..........+.+.+.+.|+ +|+
T Consensus        80 ~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~-~~~  124 (303)
T 3g0o_A           80 QVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL-NML  124 (303)
T ss_dssp             HHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            554   221    1 257778877777777777777777765 344

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.37  E-value=0.0062  Score=59.75  Aligned_cols=97  Identities=18%  Similarity=0.202  Sum_probs=63.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE--cC---------
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GD---------  140 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D---------  140 (401)
                      ..+++|||+    ||+|.||...++.+...|.+|+++++++++.+.+           ...+.+.+.  .+         
T Consensus       219 ~~g~~VlV~----GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-----------~~lGa~~~i~~~~~~~~~~~~~  283 (447)
T 4a0s_A          219 KQGDIVLIW----GASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-----------RALGCDLVINRAELGITDDIAD  283 (447)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCCCEEEHHHHTCCTTGGG
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HhcCCCEEEecccccccccccc
Confidence            346899999    9999999999999999999999998876544322           111222111  11         


Q ss_pred             ------------HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          141 ------------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       141 ------------~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                                  .+.+.+.. +.++|+||+++|.  ......++.++..|  ++|.+++.
T Consensus       284 ~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G--~iv~~G~~  338 (447)
T 4a0s_A          284 DPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGG--TVVTCGSS  338 (447)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTC--EEEESCCT
T ss_pred             cccccchhhhHHHHHHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCC--EEEEEecC
Confidence                        12233333 4458999999985  34445555554444  78887753

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.37  E-value=0.011  Score=54.51  Aligned_cols=39  Identities=18%  Similarity=0.146  Sum_probs=34.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      +|+|.|+     |.|.+|..+++.|++.||+|++.+|++++.+.
T Consensus        15 ~~~I~vI-----G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~   53 (296)
T 3qha_A           15 QLKLGYI-----GLGNMGAPMATRMTEWPGGVTVYDIRIEAMTP   53 (296)
T ss_dssp             CCCEEEE-----CCSTTHHHHHHHHTTSTTCEEEECSSTTTSHH
T ss_pred             CCeEEEE-----CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            4689999     58999999999999999999999999876654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.35  E-value=0.0049  Score=58.30  Aligned_cols=96  Identities=21%  Similarity=0.234  Sum_probs=63.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~  146 (401)
                      .+.+|||+    |+ |.||..+++.+...|+ +|+++++++++.+.+           ...+.+ ++..+    .+.+.+
T Consensus       167 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-----------~~~Ga~~~~~~~~~~~~~~v~~  230 (348)
T 2d8a_A          167 SGKSVLIT----GA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-----------KKVGADYVINPFEEDVVKEVMD  230 (348)
T ss_dssp             TTCCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-----------HHHTCSEEECTTTSCHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-----------HHhCCCEEECCCCcCHHHHHHH
Confidence            56789999    99 9999999999999999 999999887543321           111332 22221    223334


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +..+.++|+||++.+. .......++.++..|  ++|.+++
T Consensus       231 ~~~g~g~D~vid~~g~-~~~~~~~~~~l~~~G--~iv~~g~  268 (348)
T 2d8a_A          231 ITDGNGVDVFLEFSGA-PKALEQGLQAVTPAG--RVSLLGL  268 (348)
T ss_dssp             HTTTSCEEEEEECSCC-HHHHHHHHHHEEEEE--EEEECCC
T ss_pred             HcCCCCCCEEEECCCC-HHHHHHHHHHHhcCC--EEEEEcc
Confidence            4344458999999884 234455566665544  7888775

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.30  E-value=0.0065  Score=55.79  Aligned_cols=104  Identities=16%  Similarity=0.192  Sum_probs=61.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC---Ccccch-hcCCCeEEEc-CHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEI-VSAGGKTVWG-DPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~l-~~~~~~~~~~-D~~~~~~~~  148 (401)
                      ||+|.|+     |.|.+|..+++.|++.||+|++.+|++++.+.+.....   ....+. ...++-++-. +...+..++
T Consensus         1 M~~I~ii-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~   75 (287)
T 3pdu_A            1 MTTYGFL-----GLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVC   75 (287)
T ss_dssp             CCCEEEE-----CCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             CCeEEEE-----ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            5789999     58999999999999999999999999876543321111   011111 1112211111 123444443


Q ss_pred             ---cC----C-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          149 ---GG----V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       149 ---~~----~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                         ++    . +-.+||++..........+.+.+.+.|+ +|+
T Consensus        76 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~-~~~  117 (287)
T 3pdu_A           76 FGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG-RFL  117 (287)
T ss_dssp             HSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             cCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence               11    1 1256777776666666677776666665 344

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.30  E-value=0.0051  Score=58.86  Aligned_cols=97  Identities=20%  Similarity=0.258  Sum_probs=59.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcCHhhH-HHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDPAEV-GNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D~~~~-~~~~~~  150 (401)
                      .+.+|||+    ||+|-||..+++.+...|.+|+++++ .++.+.           +...+.+. +..+.+++ +.+.+.
T Consensus       183 ~g~~VlV~----Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-----------~~~lGa~~v~~~~~~~~~~~~~~~  246 (375)
T 2vn8_A          183 TGKRVLIL----GASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-----------VRKLGADDVIDYKSGSVEEQLKSL  246 (375)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-----------HHHTTCSEEEETTSSCHHHHHHTS
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-----------HHHcCCCEEEECCchHHHHHHhhc
Confidence            46799999    99999999999999999999988874 332221           11123332 22222222 233333


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .++|+||+++|.........++.++..|  ++|.++.
T Consensus       247 ~g~D~vid~~g~~~~~~~~~~~~l~~~G--~iv~~g~  281 (375)
T 2vn8_A          247 KPFDFILDNVGGSTETWAPDFLKKWSGA--TYVTLVT  281 (375)
T ss_dssp             CCBSEEEESSCTTHHHHGGGGBCSSSCC--EEEESCC
T ss_pred             CCCCEEEECCCChhhhhHHHHHhhcCCc--EEEEeCC
Confidence            3589999999865332233333333333  7887764

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.26  E-value=0.0077  Score=57.28  Aligned_cols=104  Identities=14%  Similarity=0.241  Sum_probs=60.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC---Ccccchhc-C---CCeEEEcCHhhHHH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEIVS-A---GGKTVWGDPAEVGN  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~l~~-~---~~~~~~~D~~~~~~  146 (401)
                      +|+|.|+     |.|.+|..+++.|++.||+|++.+|++++...+.....   ..+.++.. .   ++.++-.-...+..
T Consensus        22 ~mkIgiI-----GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~   96 (358)
T 4e21_A           22 SMQIGMI-----GLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDS   96 (358)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHH
T ss_pred             CCEEEEE-----CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHH
Confidence            5899999     58999999999999999999999998865443322111   11111111 1   22222111112222


Q ss_pred             ----hhcCCc-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          147 ----VVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       147 ----~~~~~~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                          +....+ -++||++.......+..+.+.+++.|+ +|+
T Consensus        97 vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~-~~v  137 (358)
T 4e21_A           97 MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGI-TYV  137 (358)
T ss_dssp             HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCC-EEE
Confidence                221111 256677776666667777777766665 344

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.24  E-value=0.0031  Score=57.65  Aligned_cols=75  Identities=16%  Similarity=0.201  Sum_probs=49.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|+    |+ |.+|+.+++.|++.|++|++.+|+.++...+..       .+...+ .+...|.+++.+    .
T Consensus       117 l~~k~vlVi----Ga-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~-------~~~~~~-~~~~~~~~~~~~----~  179 (271)
T 1nyt_A          117 RPGLRILLI----GA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAK-------LFAHTG-SIQALSMDELEG----H  179 (271)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-------HTGGGS-SEEECCSGGGTT----C
T ss_pred             cCCCEEEEE----CC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-------HhhccC-CeeEecHHHhcc----C
Confidence            346899999    88 679999999999999999999998765432211       111001 122234333222    2


Q ss_pred             cccEEEeCCCCC
Q 015746          152 TFDVVLDNNGKN  163 (401)
Q Consensus       152 ~~d~Vv~~a~~~  163 (401)
                      ++|+||++++..
T Consensus       180 ~~DivVn~t~~~  191 (271)
T 1nyt_A          180 EFDLIINATSSG  191 (271)
T ss_dssp             CCSEEEECCSCG
T ss_pred             CCCEEEECCCCC
Confidence            369999999853

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.23  E-value=0.0057  Score=57.84  Aligned_cols=95  Identities=19%  Similarity=0.185  Sum_probs=62.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---C-HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D-~~~~~~~~  148 (401)
                      .+.+|||+    ||+|-||...++.+...|.+|+++++++++.+.++        +   .+.+.+..   | .+.+.+. 
T Consensus       150 ~g~~VlV~----gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~--------~---lGa~~vi~~~~~~~~~~~~~-  213 (346)
T 3fbg_A          150 EGKTLLII----NGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK--------K---MGADIVLNHKESLLNQFKTQ-  213 (346)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH--------H---HTCSEEECTTSCHHHHHHHH-
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------h---cCCcEEEECCccHHHHHHHh-
Confidence            46799999    99999999999999999999999998775443211        1   13322221   1 2334444 


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      .+.++|+||++++.. ......++.++..|  ++|.++
T Consensus       214 ~~~g~Dvv~d~~g~~-~~~~~~~~~l~~~G--~iv~~~  248 (346)
T 3fbg_A          214 GIELVDYVFCTFNTD-MYYDDMIQLVKPRG--HIATIV  248 (346)
T ss_dssp             TCCCEEEEEESSCHH-HHHHHHHHHEEEEE--EEEESS
T ss_pred             CCCCccEEEECCCch-HHHHHHHHHhccCC--EEEEEC
Confidence            444689999998731 22344555555544  677654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.17  E-value=0.0031  Score=58.49  Aligned_cols=93  Identities=20%  Similarity=0.263  Sum_probs=57.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcC------------------CC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA------------------GG  134 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~------------------~~  134 (401)
                      .+++|.|+    |+ |.+|..++..|++.|++|++++|+++..+.....-...+..+...                  ++
T Consensus        14 ~~~~I~VI----G~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i   88 (302)
T 1f0y_A           14 IVKHVTVI----GG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTI   88 (302)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred             cCCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhce
Confidence            35789999    55 999999999999999999999998755432100000000000001                  12


Q ss_pred             eEEEcCHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       135 ~~~~~D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      .+ .   .++.+.+.++  |+||-+...+......+++.+..
T Consensus        89 ~~-~---~~~~~~~~~a--D~Vi~avp~~~~~~~~v~~~l~~  124 (302)
T 1f0y_A           89 AT-S---TDAASVVHST--DLVVEAIVENLKVKNELFKRLDK  124 (302)
T ss_dssp             EE-E---SCHHHHTTSC--SEEEECCCSCHHHHHHHHHHHTT
T ss_pred             EE-e---cCHHHhhcCC--CEEEEcCcCcHHHHHHHHHHHHh
Confidence            21 1   2344456666  99999988776655666665544

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.14  E-value=0.011  Score=54.14  Aligned_cols=69  Identities=13%  Similarity=0.161  Sum_probs=51.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ..+++|+|+    |+ |.+|+.++..|.+.|+ +|++++|+.++...+..            .+...  ..+++.+++.+
T Consensus       115 l~~k~vlvl----Ga-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~------------~~~~~--~~~~~~~~~~~  175 (277)
T 3don_A          115 IEDAYILIL----GA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL------------NINKI--NLSHAESHLDE  175 (277)
T ss_dssp             GGGCCEEEE----CC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS------------CCEEE--CHHHHHHTGGG
T ss_pred             cCCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH------------hcccc--cHhhHHHHhcC
Confidence            356899999    75 8899999999999998 89999999877654332            12222  35566666666


Q ss_pred             CcccEEEeCCC
Q 015746          151 VTFDVVLDNNG  161 (401)
Q Consensus       151 ~~~d~Vv~~a~  161 (401)
                      +  |+||++..
T Consensus       176 a--DiVInaTp  184 (277)
T 3don_A          176 F--DIIINTTP  184 (277)
T ss_dssp             C--SEEEECCC
T ss_pred             C--CEEEECcc
Confidence            5  99999865

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.12  E-value=0.016  Score=55.35  Aligned_cols=103  Identities=14%  Similarity=0.058  Sum_probs=59.6

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCc-ccCCCCCCCcccchh-------cCCCeEEEcCH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENS-DKMKKPPFNRFNEIV-------SAGGKTVWGDP  141 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~l~-------~~~~~~~~~D~  141 (401)
                      .|+++||-|+    ||||++|+.+++.|.++.+ ++..+.-+.... .++..    .+.++.       ...+.+...|.
T Consensus        16 ~M~~~kVaIv----GAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~----~~~~~~~~~~p~~~~~~~v~~~~~   87 (381)
T 3hsk_A           16 HMSVKKAGVL----GATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKD----AASWKQTETLPETEQDIVVQECKP   87 (381)
T ss_dssp             --CCEEEEEE----TTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHH----HCCCCCSSCCCHHHHTCBCEESSS
T ss_pred             cCCccEEEEE----CCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHH----hcccccccccccccccceEEeCch
Confidence            3556799999    9999999999998887653 665553222111 11100    000000       01223332332


Q ss_pred             hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ++   .+.+  +|+||.+.+  -.....++..+.+.|+ ++|=+|+..
T Consensus        88 ~~---~~~~--~Dvvf~alp--~~~s~~~~~~~~~~G~-~VIDlSa~f  127 (381)
T 3hsk_A           88 EG---NFLE--CDVVFSGLD--ADVAGDIEKSFVEAGL-AVVSNAKNY  127 (381)
T ss_dssp             CT---TGGG--CSEEEECCC--HHHHHHHHHHHHHTTC-EEEECCSTT
T ss_pred             hh---hccc--CCEEEECCC--hhHHHHHHHHHHhCCC-EEEEcCCcc
Confidence            21   2344  499999977  4556777888888898 477777743

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.12  E-value=0.0024  Score=58.70  Aligned_cols=92  Identities=20%  Similarity=0.200  Sum_probs=58.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--------------CCCeEEEc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--------------AGGKTVWG  139 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--------------~~~~~~~~  139 (401)
                      +++|.|+    | .|.+|..++..|+..|++|++.+|+++..+.....-...+.....              .++..   
T Consensus         4 ~~kV~VI----G-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~---   75 (283)
T 4e12_A            4 ITNVTVL----G-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY---   75 (283)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE---
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE---
Confidence            5789999    5 599999999999999999999999886543221100000000000              01121   


Q ss_pred             CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       140 D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                       ..++.+++.++  |+||.+...+......+++.+..
T Consensus        76 -~~~~~~~~~~a--DlVi~av~~~~~~~~~v~~~l~~  109 (283)
T 4e12_A           76 -SDDLAQAVKDA--DLVIEAVPESLDLKRDIYTKLGE  109 (283)
T ss_dssp             -ESCHHHHTTTC--SEEEECCCSCHHHHHHHHHHHHH
T ss_pred             -eCCHHHHhccC--CEEEEeccCcHHHHHHHHHHHHh
Confidence             13455566666  99999998886666666665544

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.11  E-value=0.005  Score=53.70  Aligned_cols=81  Identities=17%  Similarity=0.190  Sum_probs=52.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCccc-chhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-EIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      |+|+|+    ||+|++|+.+++.|+++|++|++++|+.++.+.+...    +. .+....+.     ..++.+++.++  
T Consensus         1 m~i~ii----Ga~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~--   65 (212)
T 1jay_A            1 MRVALL----GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE----YRRIAGDASIT-----GMKNEDAAEAC--   65 (212)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH----HHHHHSSCCEE-----EEEHHHHHHHC--
T ss_pred             CeEEEE----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hccccccCCCC-----hhhHHHHHhcC--
Confidence            589999    9999999999999999999999999987544321110    00 00000121     13455556655  


Q ss_pred             cEEEeCCCCChhhHHHHHH
Q 015746          154 DVVLDNNGKNLDAVRPVAD  172 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~  172 (401)
                      |+||++...  .....+++
T Consensus        66 D~Vi~~~~~--~~~~~~~~   82 (212)
T 1jay_A           66 DIAVLTIPW--EHAIDTAR   82 (212)
T ss_dssp             SEEEECSCH--HHHHHHHH
T ss_pred             CEEEEeCCh--hhHHHHHH
Confidence            999999763  33444444

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.11  E-value=0.0031  Score=62.16  Aligned_cols=97  Identities=19%  Similarity=0.374  Sum_probs=64.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-----------
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-----------  139 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-----------  139 (401)
                      ..+.+|||+    ||+|-||...++.+...|.+|+++++++++.+.++           ..+.+.+. .           
T Consensus       227 ~~g~~VlV~----GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-----------~lGa~~vi~~~~~d~~~~~~~  291 (456)
T 3krt_A          227 KQGDNVLIW----GASGGLGSYATQFALAGGANPICVVSSPQKAEICR-----------AMGAEAIIDRNAEGYRFWKDE  291 (456)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HHTCCEEEETTTTTCCSEEET
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-----------hhCCcEEEecCcCcccccccc
Confidence            346789999    99999999999999999999999998765443221           11222111 1           


Q ss_pred             ---CH-------hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          140 ---DP-------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       140 ---D~-------~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                         |.       +.+.++..+.++|+||++.|.  ......++.++..|  ++|.++.
T Consensus       292 ~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G--~iv~~G~  345 (456)
T 3krt_A          292 NTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGG--TITTCAS  345 (456)
T ss_dssp             TEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEE--EEEESCC
T ss_pred             cccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCc--EEEEEec
Confidence               11       344455555568999999984  44555556555544  6887764

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.08  E-value=0.019  Score=46.77  Aligned_cols=107  Identities=17%  Similarity=0.131  Sum_probs=67.6

Q ss_pred             ccCeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ..++|.|+    |++   |.+|+.+++.|++.||+|+.++.... ..           ++  .++.++    .++.++-+
T Consensus        12 ~p~~vaVv----Gas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~-~~-----------~i--~G~~~~----~sl~el~~   69 (140)
T 1iuk_A           12 QAKTIAVL----GAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQ-GE-----------EL--FGEEAV----ASLLDLKE   69 (140)
T ss_dssp             HCCEEEEE----TCCSSTTSHHHHHHHHHHHTTCEEEEECGGGT-TS-----------EE--TTEECB----SSGGGCCS
T ss_pred             CCCEEEEE----CCCCCCCChHHHHHHHHHHCCCEEEEeCCCcc-cC-----------cC--CCEEec----CCHHHCCC
Confidence            35789999    998   88999999999999998665543310 11           11  022211    12222222


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCeE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~~  226 (401)
                        .+|.++-+-.  -..+..+++.|.+.|++.++..++..                     ...+.+++++.|+++.
T Consensus        70 --~vDlavi~vp--~~~~~~v~~~~~~~gi~~i~~~~g~~---------------------~~~~~~~a~~~Gir~v  121 (140)
T 1iuk_A           70 --PVDILDVFRP--PSALMDHLPEVLALRPGLVWLQSGIR---------------------HPEFEKALKEAGIPVV  121 (140)
T ss_dssp             --CCSEEEECSC--HHHHTTTHHHHHHHCCSCEEECTTCC---------------------CHHHHHHHHHTTCCEE
T ss_pred             --CCCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEcCCcC---------------------HHHHHHHHHHcCCEEE
Confidence              3688887654  46677778888888998766543210                     1356677788887643

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.07  E-value=0.018  Score=52.76  Aligned_cols=95  Identities=12%  Similarity=0.087  Sum_probs=59.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +++||.|.    |++|.+|+.+++.+.+. +.++++. +|.........   ...+..+...++.+    .+++++++..
T Consensus        20 ~~irV~V~----Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d---~gel~G~~~~gv~v----~~dl~~ll~~   88 (288)
T 3ijp_A           20 GSMRLTVV----GANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKD---ASILIGSDFLGVRI----TDDPESAFSN   88 (288)
T ss_dssp             -CEEEEES----STTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSB---GGGGTTCSCCSCBC----BSCHHHHTTS
T ss_pred             CCeEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccc---hHHhhccCcCCcee----eCCHHHHhcC
Confidence            35799999    99999999999999866 6776665 45432211000   00011111123322    2345666654


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                        +|+||++..  ...+...++.|.+.|+ .+|
T Consensus        89 --aDVvIDFT~--p~a~~~~~~~~l~~Gv-~vV  116 (288)
T 3ijp_A           89 --TEGILDFSQ--PQASVLYANYAAQKSL-IHI  116 (288)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHHTC-EEE
T ss_pred             --CCEEEEcCC--HHHHHHHHHHHHHcCC-CEE
Confidence              699999974  6677788889999998 466

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.05  E-value=0.0078  Score=57.32  Aligned_cols=95  Identities=16%  Similarity=0.222  Sum_probs=65.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~~  147 (401)
                      .+.+|||+    | +|.+|...++.+...|.+|+++++++++.+.+           ...+.+ ++..+    .+.+.++
T Consensus       189 ~g~~VlV~----G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~v~~~  252 (363)
T 3uog_A          189 AGDRVVVQ----G-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-----------FALGADHGINRLEEDWVERVYAL  252 (363)
T ss_dssp             TTCEEEEE----S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------HHHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-----------HHcCCCEEEcCCcccHHHHHHHH
Confidence            46799999    8 89999999999999999999999877544321           111332 22222    3445555


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+.++|+||+++|.  ......++.++..|  +++.++.
T Consensus       253 ~~g~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~G~  288 (363)
T 3uog_A          253 TGDRGADHILEIAGG--AGLGQSLKAVAPDG--RISVIGV  288 (363)
T ss_dssp             HTTCCEEEEEEETTS--SCHHHHHHHEEEEE--EEEEECC
T ss_pred             hCCCCceEEEECCCh--HHHHHHHHHhhcCC--EEEEEec
Confidence            555578999999983  34555666665555  6887764

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.02  E-value=0.0068  Score=56.79  Aligned_cols=101  Identities=20%  Similarity=0.279  Sum_probs=64.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .++||.|+    |+ |.+|+.++..|+..|.  +|++++++.++....... ......+. .++.+..+|.    +.+.+
T Consensus         8 ~~~kV~Vi----Ga-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~D-L~~~~~~~-~~~~i~~~~~----~a~~~   76 (326)
T 3vku_A            8 DHQKVILV----GD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAID-LEDALPFT-SPKKIYSAEY----SDAKD   76 (326)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHH-HHTTGGGS-CCCEEEECCG----GGGTT
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhh-Hhhhhhhc-CCcEEEECcH----HHhcC
Confidence            46899999    86 9999999999999987  899999876543321100 00000111 2455554443    34677


Q ss_pred             CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      +  |+||.++|.              |....+.+.+.+.+.+.+ .++.+|
T Consensus        77 a--DiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           77 A--DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             C--SEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             C--CEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            6  999999984              456677888888887654 455444

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.00  E-value=0.0086  Score=58.80  Aligned_cols=39  Identities=15%  Similarity=0.273  Sum_probs=34.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      +|+|.|+     |.|++|..++..|.+.||+|++++|++++.+.
T Consensus         2 ~mkI~VI-----G~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~   40 (450)
T 3gg2_A            2 SLDIAVV-----GIGYVGLVSATCFAELGANVRCIDTDRNKIEQ   40 (450)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHhcCCEEEEEECCHHHHHH
Confidence            3799999     57999999999999999999999998865543

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=95.99  E-value=0.021  Score=54.26  Aligned_cols=100  Identities=16%  Similarity=0.192  Sum_probs=59.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCC-CC---Cccc-chhcCCCeEEEcCHhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKP-PF---NRFN-EIVSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~-~~---~~~~-~l~~~~~~~~~~D~~~~~~~  147 (401)
                      +++|.|+    ||||++|+.+++.|.++. .++..+........++... +.   ..+. ..  ..+.+...|.++    
T Consensus         7 ~~kVaIv----GATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~--~~~~v~~~~~~~----   76 (359)
T 4dpl_A            7 TLKAAIL----GATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEI--ADMEIKPTDPKL----   76 (359)
T ss_dssp             CEEEEET----TTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHH--HTCBCEECCGGG----
T ss_pred             CCeEEEE----CCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccccccccccccc--ccceEEeCCHHH----
Confidence            4689999    999999999999877764 3666664333222211100 00   0000 00  123333334433    


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +.+  +|+||.+.+..  ....++..+.+.|+ ++|=+|+.
T Consensus        77 ~~~--vDvvf~a~p~~--~s~~~a~~~~~~G~-~vIDlSa~  112 (359)
T 4dpl_A           77 MDD--VDIIFSPLPQG--AAGPVEEQFAKEGF-PVISNSPD  112 (359)
T ss_dssp             CTT--CCEEEECCCTT--THHHHHHHHHHTTC-EEEECSST
T ss_pred             hcC--CCEEEECCChH--HHHHHHHHHHHCCC-EEEEcCCC
Confidence            244  59999998753  35567777778898 58888875

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=95.99  E-value=0.021  Score=54.26  Aligned_cols=100  Identities=16%  Similarity=0.192  Sum_probs=59.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCC-CC---Cccc-chhcCCCeEEEcCHhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKP-PF---NRFN-EIVSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~-~~---~~~~-~l~~~~~~~~~~D~~~~~~~  147 (401)
                      +++|.|+    ||||++|+.+++.|.++. .++..+........++... +.   ..+. ..  ..+.+...|.++    
T Consensus         7 ~~kVaIv----GATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~--~~~~v~~~~~~~----   76 (359)
T 4dpk_A            7 TLKAAIL----GATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEI--ADMEIKPTDPKL----   76 (359)
T ss_dssp             CEEEEET----TTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHH--HTCBCEECCGGG----
T ss_pred             CCeEEEE----CCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccccccccccccc--ccceEEeCCHHH----
Confidence            4689999    999999999999877764 3666664333222211100 00   0000 00  123333334433    


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +.+  +|+||.+.+..  ....++..+.+.|+ ++|=+|+.
T Consensus        77 ~~~--vDvvf~a~p~~--~s~~~a~~~~~~G~-~vIDlSa~  112 (359)
T 4dpk_A           77 MDD--VDIIFSPLPQG--AAGPVEEQFAKEGF-PVISNSPD  112 (359)
T ss_dssp             CTT--CCEEEECCCTT--THHHHHHHHHHTTC-EEEECSST
T ss_pred             hcC--CCEEEECCChH--HHHHHHHHHHHCCC-EEEEcCCC
Confidence            244  59999998753  35567777778898 58888875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.99  E-value=0.019  Score=55.46  Aligned_cols=98  Identities=15%  Similarity=0.203  Sum_probs=64.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c---C-HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G---D-PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~---D-~~~~~  145 (401)
                      ..+.+|||+    |+ |-+|...++.+...|. +|+++++++++.+..           ...+.+.+. .   | .+.+.
T Consensus       212 ~~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~i~  275 (404)
T 3ip1_A          212 RPGDNVVIL----GG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-----------KELGADHVIDPTKENFVEAVL  275 (404)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-----------HHHTCSEEECTTTSCHHHHHH
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-----------HHcCCCEEEcCCCCCHHHHHH
Confidence            346799999    98 9999999999999999 899988877544321           111333222 1   1 34455


Q ss_pred             HhhcCCcccEEEeCCCCChhhHHHHHHHH----HhCCCCEEEEecc
Q 015746          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWA----KSSGVKQFLFISS  187 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa----~~~gv~~~v~~SS  187 (401)
                      ++..+.++|+||++.|..-.....+++++    +..|  +++.++.
T Consensus       276 ~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G--~iv~~G~  319 (404)
T 3ip1_A          276 DYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINA--TVAIVAR  319 (404)
T ss_dssp             HHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCC--EEEECSC
T ss_pred             HHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCc--EEEEeCC
Confidence            55555568999999986533444555555    4444  6887764

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=95.97  E-value=0.022  Score=46.60  Aligned_cols=85  Identities=20%  Similarity=0.140  Sum_probs=57.4

Q ss_pred             cCeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .++|.|+    |++   |.+|..+++.|++.||+|+.++...   ..           +  .++.++ .+.+   ++.. 
T Consensus        22 p~~iaVV----Gas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~---~~-----------i--~G~~~y-~sl~---~l~~-   76 (144)
T 2d59_A           22 YKKIALV----GASPKPERDANIVMKYLLEHGYDVYPVNPKY---EE-----------V--LGRKCY-PSVL---DIPD-   76 (144)
T ss_dssp             CCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTC---SE-----------E--TTEECB-SSGG---GCSS-
T ss_pred             CCEEEEE----ccCCCCCchHHHHHHHHHHCCCEEEEECCCC---Ce-----------E--CCeecc-CCHH---HcCC-
Confidence            5789999    998   8999999999999999866553322   11           1  122211 1222   2323 


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                       .+|.++-+..  -.....+++.|.+.|++.+++.+
T Consensus        77 -~vDlvvi~vp--~~~~~~vv~~~~~~gi~~i~~~~  109 (144)
T 2d59_A           77 -KIEVVDLFVK--PKLTMEYVEQAIKKGAKVVWFQY  109 (144)
T ss_dssp             -CCSEEEECSC--HHHHHHHHHHHHHHTCSEEEECT
T ss_pred             -CCCEEEEEeC--HHHHHHHHHHHHHcCCCEEEECC
Confidence             3698887643  57788889989899998766443

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.95  E-value=0.0082  Score=55.76  Aligned_cols=105  Identities=15%  Similarity=0.233  Sum_probs=64.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC---Ccccch-hcCCCeEEEc-CHhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEI-VSAGGKTVWG-DPAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~l-~~~~~~~~~~-D~~~~~~~  147 (401)
                      ++|+|.|+     |.|.+|..+++.|++.||+|++.+|++++...+.....   ....++ ...++-++-. +...+..+
T Consensus         8 ~~~~IgiI-----G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v   82 (306)
T 3l6d_A            8 FEFDVSVI-----GLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEV   82 (306)
T ss_dssp             CSCSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHH
T ss_pred             CCCeEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            45799999     58999999999999999999999998865443221110   011111 1112222211 23334444


Q ss_pred             hc--C----CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          148 VG--G----VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       148 ~~--~----~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +.  .    .+-.+||++..........+.+.+++.|+ +|+
T Consensus        83 ~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~-~~v  123 (306)
T 3l6d_A           83 LGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGG-HYV  123 (306)
T ss_dssp             HTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTC-EEE
T ss_pred             hcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            42  1    11257778777777777777777777776 454

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=95.92  E-value=0.038  Score=45.21  Aligned_cols=108  Identities=13%  Similarity=0.103  Sum_probs=60.9

Q ss_pred             cCeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCC--CCcccCCCCCCCcccchhcCCCeEEEcC------Hh
Q 015746           74 KKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD------PA  142 (401)
Q Consensus        74 ~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~D------~~  142 (401)
                      .++|.|+    |++   |.+|..+++.|++.||+|+.++...  +.....+.  ...+.++. ..++++..-      ++
T Consensus        13 p~~IavI----Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~--~~sl~el~-~~~Dlvii~vp~~~v~~   85 (145)
T 2duw_A           13 TRTIALV----GASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQG--YATLADVP-EKVDMVDVFRNSEAAWG   85 (145)
T ss_dssp             CCCEEEE----SCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEEC--CSSTTTCS-SCCSEEECCSCSTHHHH
T ss_pred             CCEEEEE----CcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeec--cCCHHHcC-CCCCEEEEEeCHHHHHH
Confidence            5789999    998   8999999999999999988777655  22211110  00112221 122222221      22


Q ss_pred             hHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      -+.++.+ .++..|+...+..   ...++++|++.|+ ++|--.+.+++.+
T Consensus        86 v~~~~~~-~g~~~i~i~~~~~---~~~l~~~a~~~Gi-~~igpnc~g~~~~  131 (145)
T 2duw_A           86 VAQEAIA-IGAKTLWLQLGVI---NEQAAVLAREAGL-SVVMDRCPAIELP  131 (145)
T ss_dssp             HHHHHHH-HTCCEEECCTTCC---CHHHHHHHHTTTC-EEECSCCHHHHST
T ss_pred             HHHHHHH-cCCCEEEEcCChH---HHHHHHHHHHcCC-EEEcCCeeeEEcc
Confidence            2333332 2344555444432   5677777877777 5665556665544

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=95.91  E-value=0.013  Score=57.97  Aligned_cols=106  Identities=18%  Similarity=0.217  Sum_probs=66.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCC-----C---CCcccchhc----CCCeEEEcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-----P---FNRFNEIVS----AGGKTVWGD  140 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~-----~---~~~~~~l~~----~~~~~~~~D  140 (401)
                      .+|+|-|+     |.|.+|..+++.|.+.||+|++.+|++++.+.+...     .   ...+.++..    .++-++-.-
T Consensus         3 ~~~kIgiI-----GlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp   77 (484)
T 4gwg_A            3 AQADIALI-----GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK   77 (484)
T ss_dssp             CCBSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred             CCCEEEEE-----ChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence            46899999     589999999999999999999999998665443211     0   012222221    222222221


Q ss_pred             H-hhHH----HhhcCC-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          141 P-AEVG----NVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       141 ~-~~~~----~~~~~~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      . ..++    .+.... +-++||++.......+..+.+.+++.|+ +|+-
T Consensus        78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi-~fvd  126 (484)
T 4gwg_A           78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGI-LFVG  126 (484)
T ss_dssp             SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred             ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcc-cccc
Confidence            1 1222    222222 1378888888777788888888888887 5654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.90  E-value=0.02  Score=52.82  Aligned_cols=36  Identities=33%  Similarity=0.527  Sum_probs=32.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      ++++|.|+    ||.|.+|..+++.|.+.|++|++++|++
T Consensus        20 ~~~~I~iI----Gg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIV----GGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             TCCCEEEE----TTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            35789999    8899999999999999999999998876

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.90  E-value=0.0066  Score=56.90  Aligned_cols=101  Identities=22%  Similarity=0.260  Sum_probs=64.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .+||.|+    |+ |++|..++..|+..|+  +|++++++.++.......-...+ .+...++.+..+|.    +.+.++
T Consensus         5 ~~kI~Vi----Ga-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~-~~~~~~v~i~~~~~----~a~~~a   74 (326)
T 3pqe_A            5 VNKVALI----GA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGK-AFAPQPVKTSYGTY----EDCKDA   74 (326)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTG-GGSSSCCEEEEECG----GGGTTC
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcc-ccccCCeEEEeCcH----HHhCCC
Confidence            5799999    85 9999999999999987  89999987654332100000000 01112445544443    356776


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                        |+||.++|.              |....+.+++.+.+.+.+ .++.+|
T Consensus        75 --DvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           75 --DIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             --SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --CEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence              999999984              345567777888777654 455454

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=95.90  E-value=0.012  Score=55.43  Aligned_cols=91  Identities=19%  Similarity=0.118  Sum_probs=56.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec--CC-CCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV--GD-ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r--~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      |||.|.    ||+|++|+.+++.|.+++|++..+..  +. ....        .+. +....+.+...|++   . + + 
T Consensus         1 mkVaI~----GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~--------~l~-~~g~~i~v~~~~~~---~-~-~-   61 (331)
T 2yv3_A            1 MRVAVV----GATGAVGREILKVLEARNFPLSELRLYASPRSAGV--------RLA-FRGEEIPVEPLPEG---P-L-P-   61 (331)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSC--------EEE-ETTEEEEEEECCSS---C-C-C-
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCC--------EEE-EcCceEEEEeCChh---h-c-C-
Confidence            589999    99999999999999988876433221  11 0001        111 11112333333433   2 2 4 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                       +|+||.+.+  ...+...+..+.+.|+ ++|-.|+.
T Consensus        62 -~DvV~~a~g--~~~s~~~a~~~~~~G~-~vId~s~~   94 (331)
T 2yv3_A           62 -VDLVLASAG--GGISRAKALVWAEGGA-LVVDNSSA   94 (331)
T ss_dssp             -CSEEEECSH--HHHHHHHHHHHHHTTC-EEEECSSS
T ss_pred             -CCEEEECCC--ccchHHHHHHHHHCCC-EEEECCCc
Confidence             599999987  4556667777778887 58888875

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.87  E-value=0.0049  Score=57.49  Aligned_cols=36  Identities=22%  Similarity=0.213  Sum_probs=32.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~  112 (401)
                      ..++++||+    |+ |.+|+.++..|.+.|. +|+++.|+.
T Consensus       152 l~gk~~lVl----Ga-GG~g~aia~~L~~~Ga~~V~i~nR~~  188 (315)
T 3tnl_A          152 IIGKKMTIC----GA-GGAATAICIQAALDGVKEISIFNRKD  188 (315)
T ss_dssp             CTTSEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred             ccCCEEEEE----CC-ChHHHHHHHHHHHCCCCEEEEEECCC
Confidence            356899999    86 8999999999999998 899999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.86  E-value=0.0099  Score=56.07  Aligned_cols=95  Identities=21%  Similarity=0.206  Sum_probs=62.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---C-HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D-~~~~~~~  147 (401)
                      .+.+|||+    |+ |-+|..+++.+...|+ +|+++++++++.+.++.        +   .-.++..   | .+.+.++
T Consensus       164 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~--------l---a~~v~~~~~~~~~~~~~~~  227 (343)
T 2dq4_A          164 SGKSVLIT----GA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP--------Y---ADRLVNPLEEDLLEVVRRV  227 (343)
T ss_dssp             TTSCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT--------T---CSEEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH--------h---HHhccCcCccCHHHHHHHh
Confidence            56789999    99 9999999999999999 99999988755433221        1   0111211   1 2233333


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      . +.++|+||++.+. .......++.++..|  ++|.++.
T Consensus       228 ~-~~g~D~vid~~g~-~~~~~~~~~~l~~~G--~iv~~g~  263 (343)
T 2dq4_A          228 T-GSGVEVLLEFSGN-EAAIHQGLMALIPGG--EARILGI  263 (343)
T ss_dssp             H-SSCEEEEEECSCC-HHHHHHHHHHEEEEE--EEEECCC
T ss_pred             c-CCCCCEEEECCCC-HHHHHHHHHHHhcCC--EEEEEec
Confidence            3 4468999999884 234455566665555  6887764

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=95.84  E-value=0.11  Score=48.28  Aligned_cols=93  Identities=9%  Similarity=0.085  Sum_probs=60.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh---
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV---  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~---  148 (401)
                      .|++|.|+    |..|++|...++.|.+.+.+++++. ++++.. .        +... .+++. +..|.+++.+.+   
T Consensus         2 ~mirvgiI----G~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~--------~~~~-~~~~~-~~~~~~~ll~~~~~l   66 (312)
T 3o9z_A            2 HMTRFALT----GLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-L--------VDSF-FPEAE-FFTEPEAFEAYLEDL   66 (312)
T ss_dssp             -CCEEEEE----CTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-G--------GGGT-CTTCE-EESCHHHHHHHHHHH
T ss_pred             CceEEEEE----CCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-H--------HHhh-CCCCc-eeCCHHHHHHHhhhh
Confidence            47899999    8889999999999999888877665 444321 1        1110 11233 334555554332   


Q ss_pred             --cCCcccEEEeCCC-------------------------CChhhHHHHHHHHHhCCCC
Q 015746          149 --GGVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       149 --~~~~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv~  180 (401)
                        .+..+|+|+-+..                         .+......+++++++.|+.
T Consensus        67 ~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~  125 (312)
T 3o9z_A           67 RDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRR  125 (312)
T ss_dssp             HHTTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCC
T ss_pred             cccCCCCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCE
Confidence              4556799886554                         2567777888888887763

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.84  E-value=0.024  Score=52.95  Aligned_cols=101  Identities=18%  Similarity=0.147  Sum_probs=59.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ++||.|+    |+ |++|..++..|+..|.  +|++++.+.++.......-..... +. ..+++..+|    .+.++++
T Consensus         7 ~~KI~Ii----Ga-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~-~~-~~~~i~~~~----~~a~~~a   75 (318)
T 1y6j_A            7 RSKVAII----GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP-FM-GQMSLYAGD----YSDVKDC   75 (318)
T ss_dssp             CCCEEEE----CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC-CT-TCEEEC--C----GGGGTTC
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH-hc-CCeEEEECC----HHHhCCC
Confidence            4799999    87 9999999999999987  899999887654421100000000 00 122222222    3347776


Q ss_pred             cccEEEeCCCCC--------------hhhHHHHHHHHHhCCCCEEEEecc
Q 015746          152 TFDVVLDNNGKN--------------LDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~~--------------~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                        |+||.+++.+              ....+.+++.+.+.+.+-+|.+.|
T Consensus        76 --DvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           76 --DVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             --SEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             --CEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence              9999999853              233567777777655443333334

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=95.82  E-value=0.00092  Score=54.76  Aligned_cols=70  Identities=16%  Similarity=0.206  Sum_probs=48.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .++|+|+    |+ |.+|+.+++.|.+.|++|++.+|+.++...+        .+..  ++....  .+++.+++.++  
T Consensus        21 ~~~v~ii----G~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~--------a~~~--~~~~~~--~~~~~~~~~~~--   81 (144)
T 3oj0_A           21 GNKILLV----GN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAF--------AEKY--EYEYVL--INDIDSLIKNN--   81 (144)
T ss_dssp             CCEEEEE----CC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHH--------HHHH--TCEEEE--CSCHHHHHHTC--
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHH--------HHHh--CCceEe--ecCHHHHhcCC--
Confidence            6899999    74 9999999999999999999999987654321        1111  233222  23455566665  


Q ss_pred             cEEEeCCCC
Q 015746          154 DVVLDNNGK  162 (401)
Q Consensus       154 d~Vv~~a~~  162 (401)
                      |+||.+.+.
T Consensus        82 Divi~at~~   90 (144)
T 3oj0_A           82 DVIITATSS   90 (144)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEEeCCC
Confidence            999988764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.81  E-value=0.02  Score=53.85  Aligned_cols=94  Identities=18%  Similarity=0.192  Sum_probs=61.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c---C-HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G---D-PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~---D-~~~~~~~  147 (401)
                      .+++|||+    |+ |.||..+++.+...|++|+++++++++.+.++           ..+.+.+. .   | .+.+.++
T Consensus       164 ~g~~VlV~----Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----------~lGa~~~~d~~~~~~~~~~~~~  227 (339)
T 1rjw_A          164 PGEWVAIY----GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-----------ELGADLVVNPLKEDAAKFMKEK  227 (339)
T ss_dssp             TTCEEEEE----CC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCSEEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HCCCCEEecCCCccHHHHHHHH
Confidence            46799999    99 67999999999999999999998775443211           11332221 1   1 2233333


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..  ++|+||++++. -......++.++..|  ++|.++.
T Consensus       228 ~~--~~d~vid~~g~-~~~~~~~~~~l~~~G--~~v~~g~  262 (339)
T 1rjw_A          228 VG--GVHAAVVTAVS-KPAFQSAYNSIRRGG--ACVLVGL  262 (339)
T ss_dssp             HS--SEEEEEESSCC-HHHHHHHHHHEEEEE--EEEECCC
T ss_pred             hC--CCCEEEECCCC-HHHHHHHHHHhhcCC--EEEEecc
Confidence            32  57999999884 234455566665554  6887764

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=95.81  E-value=0.041  Score=50.52  Aligned_cols=92  Identities=18%  Similarity=0.193  Sum_probs=61.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +.++|+|+    |++|..|+.+++.|++.|++++..........           +.  .++.++ .+   +.++.+...
T Consensus         6 ~~~~VaVv----GasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~-----------~i--~G~~vy-~s---l~el~~~~~   64 (288)
T 1oi7_A            6 RETRVLVQ----GITGREGQFHTKQMLTYGTKIVAGVTPGKGGM-----------EV--LGVPVY-DT---VKEAVAHHE   64 (288)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC-----------EE--TTEEEE-SS---HHHHHHHSC
T ss_pred             CCCEEEEE----CCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc-----------eE--CCEEee-CC---HHHHhhcCC
Confidence            35789999    99999999999999999998553332221100           00  133332 23   344444224


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +|+++.+..  -..+..+++.|.+.|++.+|.+++
T Consensus        65 ~Dv~Ii~vp--~~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           65 VDASIIFVP--APAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             CSEEEECCC--HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             CCEEEEecC--HHHHHHHHHHHHHCCCCEEEEECC
Confidence            699998754  677888999999999986666554

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.79  E-value=0.016  Score=53.57  Aligned_cols=39  Identities=23%  Similarity=0.332  Sum_probs=32.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      +||+|.|+    | .|.+|..++..|.+.||+|++++|+++..+
T Consensus         2 ~~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~   40 (316)
T 2ew2_A            2 NAMKIAIA----G-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIE   40 (316)
T ss_dssp             --CEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCeEEEE----C-cCHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence            36899999    6 599999999999999999999999875443

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.79  E-value=0.0084  Score=56.13  Aligned_cols=93  Identities=19%  Similarity=0.198  Sum_probs=58.4

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEc-CH-hhHHHhhcCCc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWG-DP-AEVGNVVGGVT  152 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~-D~-~~~~~~~~~~~  152 (401)
                      +|||+    ||+|-+|...++.+...|++|+++++++++.+.++           ..+.+. +.. |. .+....+.+.+
T Consensus       152 ~VlV~----Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-----------~lGa~~~i~~~~~~~~~~~~~~~~~  216 (328)
T 1xa0_A          152 PVLVT----GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-----------VLGAKEVLAREDVMAERIRPLDKQR  216 (328)
T ss_dssp             CEEES----STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-----------HTTCSEEEECC---------CCSCC
T ss_pred             eEEEe----cCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HcCCcEEEecCCcHHHHHHHhcCCc
Confidence            79999    99999999999999999999999999876543221           113322 211 22 11111222335


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +|+||++.|..  .....++.++..|  +++.++.
T Consensus       217 ~d~vid~~g~~--~~~~~~~~l~~~G--~~v~~G~  247 (328)
T 1xa0_A          217 WAAAVDPVGGR--TLATVLSRMRYGG--AVAVSGL  247 (328)
T ss_dssp             EEEEEECSTTT--THHHHHHTEEEEE--EEEECSC
T ss_pred             ccEEEECCcHH--HHHHHHHhhccCC--EEEEEee
Confidence            89999999863  4444555554444  6887764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.78  E-value=0.0038  Score=57.41  Aligned_cols=78  Identities=18%  Similarity=0.260  Sum_probs=49.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ..+++|+|+    |+ |.+|+.++..|.+.|. +|++++|+.++...+..    .+... ..++.+...+.+++.+.+.+
T Consensus       125 l~~k~vlVl----Ga-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~----~~~~~-~~~~~i~~~~~~~l~~~l~~  194 (283)
T 3jyo_A          125 AKLDSVVQV----GA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD----VINNA-VGREAVVGVDARGIEDVIAA  194 (283)
T ss_dssp             CCCSEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH----HHHHH-HTSCCEEEECSTTHHHHHHH
T ss_pred             cCCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH----HHHhh-cCCceEEEcCHHHHHHHHhc
Confidence            356899999    87 8899999999999998 79999998865432211    00000 01223333344455555554


Q ss_pred             CcccEEEeCCC
Q 015746          151 VTFDVVLDNNG  161 (401)
Q Consensus       151 ~~~d~Vv~~a~  161 (401)
                      +  |+||++..
T Consensus       195 ~--DiVInaTp  203 (283)
T 3jyo_A          195 A--DGVVNATP  203 (283)
T ss_dssp             S--SEEEECSS
T ss_pred             C--CEEEECCC
Confidence            4  77776654

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.75  E-value=0.0053  Score=54.14  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=53.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEE-EecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ++||+|.|+    | .|.+|..+++.|.+.|++|++ .+|++++...+.        .  ..++.....+.+    .+.+
T Consensus        21 m~mmkI~II----G-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~--------~--~~g~~~~~~~~~----~~~~   81 (220)
T 4huj_A           21 QSMTTYAII----G-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVT--------D--RFGASVKAVELK----DALQ   81 (220)
T ss_dssp             GGSCCEEEE----E-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHH--------H--HHTTTEEECCHH----HHTT
T ss_pred             hcCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHH--------H--HhCCCcccChHH----HHhc
Confidence            457899999    6 999999999999999999999 778776543211        1  013333333333    2455


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHH
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWA  174 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa  174 (401)
                      +  |+||-+..  ......+++.+
T Consensus        82 a--DvVilavp--~~~~~~v~~~l  101 (220)
T 4huj_A           82 A--DVVILAVP--YDSIADIVTQV  101 (220)
T ss_dssp             S--SEEEEESC--GGGHHHHHTTC
T ss_pred             C--CEEEEeCC--hHHHHHHHHHh
Confidence            4  99998764  44555555544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.74  E-value=0.011  Score=56.68  Aligned_cols=99  Identities=16%  Similarity=0.224  Sum_probs=65.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|+    |+ |.||+.+++.|...|.+|++++|+.++.+.+        .......+.+...+.+++.+.+.++
T Consensus       166 l~g~~V~Vi----G~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~--------~~~~g~~~~~~~~~~~~l~~~l~~a  232 (377)
T 2vhw_A          166 VEPADVVVI----GA-GTAGYNAARIANGMGATVTVLDINIDKLRQL--------DAEFCGRIHTRYSSAYELEGAVKRA  232 (377)
T ss_dssp             BCCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTTTSSEEEECCHHHHHHHHHHC
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH--------HHhcCCeeEeccCCHHHHHHHHcCC
Confidence            456899999    87 9999999999999999999999987543211        1111112233444566777777765


Q ss_pred             cccEEEeCCCCChh-----hHHHHHHHHHhCCCCEEEEecc
Q 015746          152 TFDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~-----~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                        |+||++.+....     .....++.++..+  .+|.++.
T Consensus       233 --DvVi~~~~~p~~~t~~li~~~~l~~mk~g~--~iV~va~  269 (377)
T 2vhw_A          233 --DLVIGAVLVPGAKAPKLVSNSLVAHMKPGA--VLVDIAI  269 (377)
T ss_dssp             --SEEEECCCCTTSCCCCCBCHHHHTTSCTTC--EEEEGGG
T ss_pred             --CEEEECCCcCCCCCcceecHHHHhcCCCCc--EEEEEec
Confidence              999998764321     1334444444332  6888884

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=95.69  E-value=0.033  Score=52.46  Aligned_cols=92  Identities=20%  Similarity=0.168  Sum_probs=57.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ++|-|+    ||||++|+.+++.|.++.+   ++..+.-......+        +. +....+.+...+.+    .+.+ 
T Consensus         2 ~~VaIv----GatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~--------~~-~~~~~~~~~~~~~~----~~~~-   63 (344)
T 3tz6_A            2 LSIGIV----GATGQVGQVMRTLLDERDFPASAVRFFASARSQGRK--------LA-FRGQEIEVEDAETA----DPSG-   63 (344)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCE--------EE-ETTEEEEEEETTTS----CCTT-
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCc--------ee-ecCCceEEEeCCHH----Hhcc-
Confidence            689999    9999999999999988855   34544432221111        11 11111222222222    2344 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                       +|+||.+.+  -......+..+.+.|+ ++|=+|+.
T Consensus        64 -~Dvvf~a~~--~~~s~~~a~~~~~~G~-~vID~Sa~   96 (344)
T 3tz6_A           64 -LDIALFSAG--SAMSKVQAPRFAAAGV-TVIDNSSA   96 (344)
T ss_dssp             -CSEEEECSC--HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             -CCEEEECCC--hHHHHHHHHHHHhCCC-EEEECCCc
Confidence             599999987  4556777777888898 58888874

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.67  E-value=0.098  Score=49.70  Aligned_cols=93  Identities=15%  Similarity=0.143  Sum_probs=55.6

Q ss_pred             CeEEEEecCCCccccchHHHHH-HHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAK-ELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~-~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      |+|-|+    ||||++|+.+++ .|.++.+   ++..++-.. ...++.        ++......+...  .+... +.+
T Consensus         1 ~~VaIv----GATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~--------~~~~~~~~~~~~--~~~~~-~~~   64 (370)
T 3pzr_A            1 MRVGLV----GWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAP--------NFGKDAGMLHDA--FDIES-LKQ   64 (370)
T ss_dssp             CEEEEE----SCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCC--------CSSSCCCBCEET--TCHHH-HTT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHH--------HhCCCceEEEec--CChhH-hcc
Confidence            589999    999999999999 6666553   555554322 222111        111112223222  12222 355


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEEEecc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v~~SS  187 (401)
                      +  |+||.+.+  -......+..+.+.|++ ++|=.|+
T Consensus        65 ~--Dvvf~a~~--~~~s~~~~~~~~~~G~k~~VID~ss   98 (370)
T 3pzr_A           65 L--DAVITCQG--GSYTEKVYPALRQAGWKGYWIDAAS   98 (370)
T ss_dssp             C--SEEEECSC--HHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             C--CEEEECCC--hHHHHHHHHHHHHCCCCEEEEeCCc
Confidence            4  99999987  45566777777788874 5666665

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.64  E-value=0.0096  Score=55.09  Aligned_cols=75  Identities=13%  Similarity=0.201  Sum_probs=51.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcCHhhHHHhhc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVG  149 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~~~~~~~~~  149 (401)
                      ...++|+|+    |+ |.+|+.++..|++.|+ +|++.+|+.++...+..       .+. ... .++  +.+++.+.+.
T Consensus       139 l~~~~vlVl----Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~-------~~~-~~~~~~~--~~~~~~~~~~  203 (297)
T 2egg_A          139 LDGKRILVI----GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVR-------EGD-ERRSAYF--SLAEAETRLA  203 (297)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH-------HSC-SSSCCEE--CHHHHHHTGG
T ss_pred             CCCCEEEEE----Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------Hhh-hccCcee--eHHHHHhhhc
Confidence            356899999    76 7799999999999998 99999998765432211       000 000 222  4456666666


Q ss_pred             CCcccEEEeCCCCC
Q 015746          150 GVTFDVVLDNNGKN  163 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~  163 (401)
                      ++  |+||++.+..
T Consensus       204 ~a--DivIn~t~~~  215 (297)
T 2egg_A          204 EY--DIIINTTSVG  215 (297)
T ss_dssp             GC--SEEEECSCTT
T ss_pred             cC--CEEEECCCCC
Confidence            65  9999998753

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.60  E-value=0.03  Score=52.40  Aligned_cols=100  Identities=20%  Similarity=0.229  Sum_probs=65.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccch---hcCCCeEE-EcCHhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTV-WGDPAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l---~~~~~~~~-~~D~~~~~~  146 (401)
                      +.++||.|+    |+ |.+|..++..|+..|+ +|+++++++++......    .+.+.   ......+. ..|.    +
T Consensus         5 m~~~kI~vi----Ga-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~----dl~~~~~~~~~~~~v~~t~d~----~   71 (324)
T 3gvi_A            5 MARNKIALI----GS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGL----DIAESSPVDGFDAKFTGANDY----A   71 (324)
T ss_dssp             -CCCEEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHH----HHHHHHHHHTCCCCEEEESSG----G
T ss_pred             CcCCEEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHH----HHhchhhhcCCCCEEEEeCCH----H
Confidence            456799999    87 9999999999999999 99999998865432110    11111   11133333 2343    5


Q ss_pred             hhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          147 VVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      .++++  |+||.++|.              |....+.+++.+.+.+.+ .++.+|
T Consensus        72 a~~~a--DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           72 AIEGA--DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             GGTTC--SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHCCC--CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            67776  999999884              344566777777776543 455555

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=95.56  E-value=0.034  Score=54.28  Aligned_cols=39  Identities=28%  Similarity=0.345  Sum_probs=34.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~  118 (401)
                      |+|.|+    | +|++|..++..|++.||+|++++|++++.+.+
T Consensus         1 mkI~VI----G-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l   39 (436)
T 1mv8_A            1 MRISIF----G-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (436)
T ss_dssp             CEEEEE----C-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            589999    5 89999999999999999999999987665443

>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*

Probab=95.56  E-value=0.038  Score=48.18  Aligned_cols=97  Identities=15%  Similarity=0.141  Sum_probs=68.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHH--HhCCCeEEEEe-cCCC-CcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKEL--LGSGHEVTIMT-VGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~L--l~~g~~V~~~~-r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~  148 (401)
                      .+.+|+|+    |+ |.+|+.+++.+  .+.|++++++- .++. +...         ..+  .++.+.  +.+++.+++
T Consensus        83 ~~~~V~Iv----Ga-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~---------~~i--~GvpV~--~~~dL~~~v  144 (212)
T 3keo_A           83 STTNVMLV----GC-GNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGK---------TTE--DGIPVY--GISTINDHL  144 (212)
T ss_dssp             SCEEEEEE----CC-SHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTC---------BCT--TCCBEE--EGGGHHHHC
T ss_pred             CCCEEEEE----Cc-CHHHHHHHHhhhcccCCeEEEEEEeCCchhccCc---------eeE--CCeEEe--CHHHHHHHH
Confidence            34689999    65 99999999984  34578877755 4443 2211         011  256655  368899999


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      +..++|.++-+..  -...+.+++.|.++|++-++..+..-
T Consensus       145 ~~~~Id~vIIAvP--s~~aq~v~d~lv~~GIk~I~nFap~~  183 (212)
T 3keo_A          145 IDSDIETAILTVP--STEAQEVADILVKAGIKGILSFSPVH  183 (212)
T ss_dssp             -CCSCCEEEECSC--GGGHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             HHcCCCEEEEecC--chhHHHHHHHHHHcCCCEEEEcCCcc
Confidence            9888999998865  34567899999999999888777543

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=95.54  E-value=0.11  Score=49.43  Aligned_cols=93  Identities=15%  Similarity=0.150  Sum_probs=56.7

Q ss_pred             cCeEEEEecCCCccccchHHHHH-HHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc-CHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAK-ELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~-~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D~~~~~~~~  148 (401)
                      .++|-|+    ||||++|+.+++ .|.++.+   ++..++-.. ...++.        ++......+... |+++    +
T Consensus         4 ~~~VaIv----GATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~--------~~~~~~~~v~~~~~~~~----~   66 (377)
T 3uw3_A            4 SMNVGLV----GWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN-AGGKAP--------SFAKNETTLKDATSIDD----L   66 (377)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESSC-TTSBCC--------TTCCSCCBCEETTCHHH----H
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhhCCCCceEEEEEechh-cCCCHH--------HcCCCceEEEeCCChhH----h
Confidence            5799999    999999999999 5556553   555554322 221111        111112223322 2332    3


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v~~SS  187 (401)
                      .++  |+||.+.+  -.....++..+.+.|++ ++|=.|+
T Consensus        67 ~~v--Dvvf~a~~--~~~s~~~~~~~~~~G~k~~VID~ss  102 (377)
T 3uw3_A           67 KKC--DVIITCQG--GDYTNDVFPKLRAAGWNGYWIDAAS  102 (377)
T ss_dssp             HTC--SEEEECSC--HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             cCC--CEEEECCC--hHHHHHHHHHHHHCCCCEEEEeCCc
Confidence            454  99999987  45567777777888974 6666665

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.53  E-value=0.043  Score=51.25  Aligned_cols=100  Identities=21%  Similarity=0.215  Sum_probs=65.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccc---hhcCCCeEE-EcCHhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTV-WGDPAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~---l~~~~~~~~-~~D~~~~~~  146 (401)
                      +.++||.|+    | .|.+|..++..|+..|. +|+++++++++......    .+.+   .......+. ..|.    +
T Consensus         3 m~~~kI~ii----G-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~----dL~~~~~~~~~~~~v~~t~d~----~   69 (321)
T 3p7m_A            3 MARKKITLV----G-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKAL----DLLQTCPIEGVDFKVRGTNDY----K   69 (321)
T ss_dssp             CCCCEEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHH----HHHTTHHHHTCCCCEEEESCG----G
T ss_pred             CCCCEEEEE----C-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHH----HHHhhhhhcCCCcEEEEcCCH----H
Confidence            446899999    8 59999999999999988 99999998865432110    1111   111133433 2342    4


Q ss_pred             hhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          147 VVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      .++++  |+||.+++.              |....+.+++.+.+.+.+ .++.+|
T Consensus        70 a~~~a--DvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           70 DLENS--DVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             GGTTC--SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHCCC--CEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            67776  999999884              345566777777776644 455554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.52  E-value=0.014  Score=55.57  Aligned_cols=95  Identities=21%  Similarity=0.316  Sum_probs=63.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EE-EcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~D~~~~~~~~~~  150 (401)
                      .+.+|||+    |+ |-||..+++.+...|++|+++++++++.....+          ..+.+ ++ ..|.+.+.++.. 
T Consensus       187 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----------~lGa~~v~~~~~~~~~~~~~~-  250 (366)
T 1yqd_A          187 PGKHIGIV----GL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK----------NFGADSFLVSRDQEQMQAAAG-  250 (366)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH----------TSCCSEEEETTCHHHHHHTTT-
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hcCCceEEeccCHHHHHHhhC-
Confidence            46799999    96 999999999999999999999988765432110          11222 22 223445555543 


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       ++|+||++++... .....++.++..|  ++|.+++
T Consensus       251 -~~D~vid~~g~~~-~~~~~~~~l~~~G--~iv~~g~  283 (366)
T 1yqd_A          251 -TLDGIIDTVSAVH-PLLPLFGLLKSHG--KLILVGA  283 (366)
T ss_dssp             -CEEEEEECCSSCC-CSHHHHHHEEEEE--EEEECCC
T ss_pred             -CCCEEEECCCcHH-HHHHHHHHHhcCC--EEEEEcc
Confidence             4799999998531 2234555555544  7888875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=95.52  E-value=0.026  Score=53.71  Aligned_cols=94  Identities=22%  Similarity=0.275  Sum_probs=60.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~~~~~  147 (401)
                      .+.+|||+    ||+|.+|...++.+.. .|.+|+++++++++.+.+           ...+.+.+...    .+.+.++
T Consensus       171 ~g~~VlV~----Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-----------~~lGad~vi~~~~~~~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIV----GGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-----------KSLGAHHVIDHSKPLAAEVAAL  235 (363)
T ss_dssp             SEEEEEEE----STTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-----------HHTTCSEEECTTSCHHHHHHTT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-----------HHcCCCEEEeCCCCHHHHHHHh
Confidence            45789999    9999999999888876 689999999877544321           12233333221    2233333


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEe
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                       .+.++|+||++.|.. ......++.++..|  ++|.+
T Consensus       236 -~~~g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~  269 (363)
T 4dvj_A          236 -GLGAPAFVFSTTHTD-KHAAEIADLIAPQG--RFCLI  269 (363)
T ss_dssp             -CSCCEEEEEECSCHH-HHHHHHHHHSCTTC--EEEEC
T ss_pred             -cCCCceEEEECCCch-hhHHHHHHHhcCCC--EEEEE
Confidence             334689999998732 23344555555544  68876

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=95.51  E-value=0.045  Score=51.68  Aligned_cols=96  Identities=16%  Similarity=0.246  Sum_probs=61.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cC----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D----~~~~~~  146 (401)
                      .+.+|||+    |+ |-+|...++.+...|++|+++++++++.+.++           ..+.+ ++. .|    .+.+.+
T Consensus       168 ~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-----------~lGa~~~~~~~~~~~~~~~i~~  231 (352)
T 1e3j_A          168 LGTTVLVI----GA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-----------NCGADVTLVVDPAKEEESSIIE  231 (352)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----------HTTCSEEEECCTTTSCHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----------HhCCCEEEcCcccccHHHHHHH
Confidence            46799999    97 89999999999999999999988775443211           11222 221 11    234444


Q ss_pred             hhc---CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~---~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ...   +.++|+||++.+.. ......++.++..|  ++|.++.
T Consensus       232 ~~~~~~g~g~D~vid~~g~~-~~~~~~~~~l~~~G--~iv~~G~  272 (352)
T 1e3j_A          232 RIRSAIGDLPNVTIDCSGNE-KCITIGINITRTGG--TLMLVGM  272 (352)
T ss_dssp             HHHHHSSSCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECSC
T ss_pred             HhccccCCCCCEEEECCCCH-HHHHHHHHHHhcCC--EEEEEec
Confidence            443   34579999998852 23344555555544  7887763

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.51  E-value=0.074  Score=50.33  Aligned_cols=107  Identities=12%  Similarity=0.119  Sum_probs=66.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT  136 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~  136 (401)
                      ....+|+|+    |+ |.+|..+++.|...|. ++++++++.-....+..+......++.              .+.+++
T Consensus       116 L~~~~Vlvv----G~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v  190 (353)
T 3h5n_A          116 LKNAKVVIL----GC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISV  190 (353)
T ss_dssp             HHTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred             HhCCeEEEE----CC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeE
Confidence            346899999    65 7799999999999996 788898876444433332221111111              123333


Q ss_pred             --EEcC--Hhh-HHHhhcCCcccEEEeCCCCChh-hHHHHHHHHHhCCCCEEEEeccc
Q 015746          137 --VWGD--PAE-VGNVVGGVTFDVVLDNNGKNLD-AVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       137 --~~~D--~~~-~~~~~~~~~~d~Vv~~a~~~~~-~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                        +..+  .+. +.. +.+  +|+||++.. |.. .-..+-++|.+.+++ +|+.+..
T Consensus       191 ~~~~~~i~~~~~~~~-~~~--~DlVvd~~D-n~~~~r~~ln~~c~~~~~p-~i~~~~~  243 (353)
T 3h5n_A          191 SEIALNINDYTDLHK-VPE--ADIWVVSAD-HPFNLINWVNKYCVRANQP-YINAGYV  243 (353)
T ss_dssp             EEEECCCCSGGGGGG-SCC--CSEEEECCC-CSTTHHHHHHHHHHHTTCC-EEEEEEE
T ss_pred             EEeecccCchhhhhH-hcc--CCEEEEecC-ChHHHHHHHHHHHHHhCCC-EEEEEEe
Confidence              2222  222 444 555  499999764 344 444555789999975 7776543

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=95.50  E-value=0.0035  Score=58.52  Aligned_cols=105  Identities=18%  Similarity=0.173  Sum_probs=68.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--------------CCCeEEEc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--------------AGGKTVWG  139 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--------------~~~~~~~~  139 (401)
                      ..+|.|+     |+|.+|+.|+..++..|++|++++.+++...+....-...+..+..              ..+..   
T Consensus         6 ~~~VaVi-----GaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~---   77 (319)
T 3ado_A            6 AGDVLIV-----GSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS---   77 (319)
T ss_dssp             -CEEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE---
T ss_pred             CCeEEEE-----CCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc---
Confidence            4689999     5699999999999999999999998765432110000000011100              01111   


Q ss_pred             CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       140 D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                       ..++.+++.++  |.||-+...++..-+.+...+.+.-.+.-|+.|+++
T Consensus        78 -~~~l~~a~~~a--d~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTS  124 (319)
T 3ado_A           78 -CTNLAEAVEGV--VHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSS  124 (319)
T ss_dssp             -ECCHHHHTTTE--EEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred             -ccchHhHhccC--cEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhh
Confidence             23456667776  999999999999999999988776434455555443

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=95.48  E-value=0.035  Score=52.64  Aligned_cols=98  Identities=20%  Similarity=0.210  Sum_probs=62.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe-EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhh----H
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAE----V  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~----~  144 (401)
                      .+.+|||+    |+ |.+|...++.+...|.+ |+++++++++.+.+        .++ ...+..+..   +.++    +
T Consensus       179 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a--------~~l-~~~~~~~~~~~~~~~~~~~~v  244 (363)
T 3m6i_A          179 LGDPVLIC----GA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA--------KEI-CPEVVTHKVERLSAEESAKKI  244 (363)
T ss_dssp             TTCCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH--------HHH-CTTCEEEECCSCCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH--------HHh-chhcccccccccchHHHHHHH
Confidence            46789999    98 99999999999999997 88888877554321        122 112222222   2233    3


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .++..+.++|+||++.|.. ......++.++..|  +++.++.
T Consensus       245 ~~~t~g~g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~G~  284 (363)
T 3m6i_A          245 VESFGGIEPAVALECTGVE-SSIAAAIWAVKFGG--KVFVIGV  284 (363)
T ss_dssp             HHHTSSCCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECCC
T ss_pred             HHHhCCCCCCEEEECCCCh-HHHHHHHHHhcCCC--EEEEEcc
Confidence            3344455689999998842 23445555555554  7887764

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=95.41  E-value=0.041  Score=51.25  Aligned_cols=105  Identities=11%  Similarity=-0.029  Sum_probs=63.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCC-------CcccCCCCC-CC-cccch-hcCCCeEEEcC-
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDE-------NSDKMKKPP-FN-RFNEI-VSAGGKTVWGD-  140 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~-------~~~~~~~~~-~~-~~~~l-~~~~~~~~~~D-  140 (401)
                      ++|+|.|+     |.|.+|..+++.|++.| |+|++.+|+++       ....+.... .. ...+. ...++-++-.- 
T Consensus        23 M~m~IgvI-----G~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~~~aDvVi~avp~   97 (317)
T 4ezb_A           23 MMTTIAFI-----GFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSLVVG   97 (317)
T ss_dssp             SCCEEEEE-----CCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGGGGCSEEEECCCG
T ss_pred             cCCeEEEE-----CccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHHhcCCEEEEecCC
Confidence            45799999     58999999999999999 99999999873       111110000 01 11111 11122222111 


Q ss_pred             ---HhhHHHhhcCCc-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          141 ---PAEVGNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       141 ---~~~~~~~~~~~~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                         .+.+..+....+ -.+||++.......+..+.+.+.+.|+ +|+
T Consensus        98 ~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~-~~~  143 (317)
T 4ezb_A           98 AATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKG-SFV  143 (317)
T ss_dssp             GGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSC-EEE
T ss_pred             HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence               222333333222 267888888778888888888877776 455

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.40  E-value=0.073  Score=52.03  Aligned_cols=41  Identities=15%  Similarity=0.327  Sum_probs=36.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK  120 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~  120 (401)
                      .+|-|+     |.|++|..++..|++.||+|++++|++++.+.+..
T Consensus         9 ~~~~vI-----GlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~   49 (446)
T 4a7p_A            9 VRIAMI-----GTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ   49 (446)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred             eEEEEE-----cCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence            578999     79999999999999999999999999988766544

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=95.40  E-value=0.011  Score=56.17  Aligned_cols=93  Identities=19%  Similarity=0.234  Sum_probs=59.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC---CCcccCCCCCCCcccchhcCCCeEEEc-C-HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSAGGKTVWG-D-PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~-D-~~~~~~~~  148 (401)
                      +++|||+    |+ |.||..+++.+...|++|++++++.   ++.+.           +...+.+.+.. | .+.+.+ .
T Consensus       181 g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----------~~~~ga~~v~~~~~~~~~~~-~  243 (366)
T 2cdc_A          181 CRKVLVV----GT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-----------IEETKTNYYNSSNGYDKLKD-S  243 (366)
T ss_dssp             TCEEEEE----SC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-----------HHHHTCEEEECTTCSHHHHH-H
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-----------HHHhCCceechHHHHHHHHH-h
Confidence            6899999    99 9999999999999999999999887   43321           11113333311 1 222333 2


Q ss_pred             cCCcccEEEeCCCCChhhH-HHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~-~~ll~aa~~~gv~~~v~~SS  187 (401)
                      . .++|+||++++... .. ...++.++..|  ++|.++.
T Consensus       244 ~-~~~d~vid~~g~~~-~~~~~~~~~l~~~G--~iv~~g~  279 (366)
T 2cdc_A          244 V-GKFDVIIDATGADV-NILGNVIPLLGRNG--VLGLFGF  279 (366)
T ss_dssp             H-CCEEEEEECCCCCT-HHHHHHGGGEEEEE--EEEECSC
T ss_pred             C-CCCCEEEECCCChH-HHHHHHHHHHhcCC--EEEEEec
Confidence            2 34799999998531 22 34444444333  6887764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.38  E-value=0.0093  Score=55.04  Aligned_cols=97  Identities=15%  Similarity=0.196  Sum_probs=64.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchh---cCCCeEEE-cCHhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIV---SAGGKTVW-GDPAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~---~~~~~~~~-~D~~~~~~~~  148 (401)
                      |||.|+    |+ |.+|..++..|+..|+  +|+++++++++......    .+.+..   .....+.. .|    .+.+
T Consensus         1 MkI~Vi----Ga-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~----dl~~~~~~~~~~~~i~~t~d----~~a~   67 (294)
T 1oju_A            1 MKLGFV----GA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAM----DLAHAAAGIDKYPKIVGGAD----YSLL   67 (294)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHH----HHHHHHHTTTCCCEEEEESC----GGGG
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHH----HHHhhhhhcCCCCEEEEeCC----HHHh
Confidence            689999    88 9999999999999998  89999998865431100    011110   01223332 23    4567


Q ss_pred             cCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      +++  |+||.++|.              |....+.+.+.+.+.+.+ .++.+|
T Consensus        68 ~~a--DiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           68 KGS--EIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             TTC--SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             CCC--CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            777  999999984              345566777778777644 455555

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.35  E-value=0.029  Score=53.10  Aligned_cols=92  Identities=14%  Similarity=0.143  Sum_probs=61.1

Q ss_pred             CeEEEEecCCCccccchHHH-HHHH-HhCCCe-EEEEecCCC---CcccCCCCCCCcccchhcCCCeEEEc---CHhhHH
Q 015746           75 KKVLIVNTNSGGHAVIGFYL-AKEL-LGSGHE-VTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVG  145 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l-~~~L-l~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~  145 (401)
                      .+|||+    |+ |-||... ++.+ ...|.+ |++++++++   +.+.+           ...+.+.+..   |..++.
T Consensus       174 ~~VlV~----Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-----------~~lGa~~v~~~~~~~~~i~  237 (357)
T 2b5w_A          174 SSAFVL----GN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-----------EELDATYVDSRQTPVEDVP  237 (357)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-----------HHTTCEEEETTTSCGGGHH
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-----------HHcCCcccCCCccCHHHHH
Confidence            799999    99 9999999 8888 778987 999998876   43321           1224443311   112255


Q ss_pred             HhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ++ .+ ++|+||++.|.. ......++.++..|  ++|.++.
T Consensus       238 ~~-~g-g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~g~  274 (357)
T 2b5w_A          238 DV-YE-QMDFIYEATGFP-KHAIQSVQALAPNG--VGALLGV  274 (357)
T ss_dssp             HH-SC-CEEEEEECSCCH-HHHHHHHHHEEEEE--EEEECCC
T ss_pred             Hh-CC-CCCEEEECCCCh-HHHHHHHHHHhcCC--EEEEEeC
Confidence            55 55 789999998852 23445556555554  6887764

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=95.33  E-value=0.07  Score=53.84  Aligned_cols=86  Identities=12%  Similarity=0.118  Sum_probs=65.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~  150 (401)
                      ++|+|.    | .|-+|+++++.|.+.|++|++++.+++....+               ..++.||   .+.+.++ ++.
T Consensus       349 ~~viIi----G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------------~~~i~gD~t~~~~L~~agi~~  408 (565)
T 4gx0_A          349 ELIFII----G-HGRIGCAAAAFLDRKPVPFILIDRQESPVCND---------------HVVVYGDATVGQTLRQAGIDR  408 (565)
T ss_dssp             CCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---------------SCEEESCSSSSTHHHHHTTTS
T ss_pred             CCEEEE----C-CCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---------------CCEEEeCCCCHHHHHhcCccc
Confidence            789999    5 49999999999999999999999998765431               1678888   5556555 333


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFL  183 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v  183 (401)
                        .|.+|-+.+.+ .....+...|++.+.+ ++|
T Consensus       409 --ad~vi~~~~~d-~~ni~~~~~ak~l~~~~~ii  439 (565)
T 4gx0_A          409 --ASGIIVTTNDD-STNIFLTLACRHLHSHIRIV  439 (565)
T ss_dssp             --CSEEEECCSCH-HHHHHHHHHHHHHCSSSEEE
T ss_pred             --cCEEEEECCCc-hHHHHHHHHHHHHCCCCEEE
Confidence              59999888765 5555666788888875 555

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=95.29  E-value=0.066  Score=52.77  Aligned_cols=37  Identities=16%  Similarity=0.158  Sum_probs=34.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhC-CC-eEEEEecCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GH-EVTIMTVGDE  113 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~-~V~~~~r~~~  113 (401)
                      .++|+|.|+     |.|++|..++..|++. || +|++++++++
T Consensus        16 ~~~mkIaVI-----GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           16 GPIKKIGVL-----GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CSCCEEEEE-----CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCCEEEEE-----CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            346899999     7899999999999999 99 9999999998

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=95.29  E-value=0.038  Score=52.70  Aligned_cols=84  Identities=20%  Similarity=0.277  Sum_probs=54.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~~~~~~  150 (401)
                      |++|+|+    |+ |..|+.+++.|.+.|++|++++.++.....       .+.     . ..+..   |.+.+.++..+
T Consensus         1 M~~Ilil----g~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~-------~~~-----~-~~~~~~~~d~~~l~~~~~~   62 (380)
T 3ax6_A            1 MKKIGII----GG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG-------QVA-----D-EQIVAGFFDSERIEDLVKG   62 (380)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG-------GGS-----S-EEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh-------hhC-----c-eEEECCCCCHHHHHHHHhc
Confidence            5789999    75 789999999999999999999876533210       010     0 12222   46677776644


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                        +|+|+..... ..  ..+++.+++.|++
T Consensus        63 --~d~v~~~~e~-~~--~~~~~~l~~~gi~   87 (380)
T 3ax6_A           63 --SDVTTYDLEH-ID--VQTLKKLYNEGYK   87 (380)
T ss_dssp             --CSEEEESCSC-SC--HHHHHHHHHTTCE
T ss_pred             --CCEEEecccC-CC--HHHHHHHHHCCCe
Confidence              6998865432 21  3455667778873

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=95.27  E-value=0.015  Score=57.04  Aligned_cols=93  Identities=10%  Similarity=0.096  Sum_probs=57.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE---------cCH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---------GDP  141 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~---------~D~  141 (401)
                      .+++++|||+    | .|.+|..+++.+.+.|++|++++...+....        ...+.  .-.+..         .|.
T Consensus         3 ~m~~~kiLI~----g-~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~--------~~~~a--d~~~~i~~~~~~~~~~d~   67 (446)
T 3ouz_A            3 AMEIKSILIA----N-RGEIALRALRTIKEMGKKAICVYSEADKDAL--------YLKYA--DASICIGKARSSESYLNI   67 (446)
T ss_dssp             TTCCCEEEEC----C-CHHHHHHHHHHHHHTTCEEEEEEEGGGTTCT--------HHHHS--SEEEEEECCTTTTGGGCH
T ss_pred             ccccceEEEE----C-CCHHHHHHHHHHHHcCCEEEEEEcCcccccc--------hHhhC--CEEEEcCCCCccccccCH
Confidence            4567899999    5 6779999999999999999998755432110        00010  111111         245


Q ss_pred             hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                      +.+.++.+..++|+|+-.-+...+ ...+++++.+.|+
T Consensus        68 ~~l~~~~~~~~~d~i~p~~g~~~e-~~~~~~~~~~~g~  104 (446)
T 3ouz_A           68 PAIIAAAEIAEADAIFPGYGFLSE-NQNFVEICAKHNI  104 (446)
T ss_dssp             HHHHHHHHHHTCSEEECCSSTTTT-CHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCcCEEEECCccccc-CHHHHHHHHHCCC
Confidence            667776665567998854332111 1345677777876

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.26  E-value=0.02  Score=53.74  Aligned_cols=104  Identities=15%  Similarity=0.145  Sum_probs=62.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +|||.|+    || |.+|..++..|...|+ +|++++++++..+............+ .....+..  ..++.+.++++ 
T Consensus         9 ~~kI~VI----Ga-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~-~~~~~i~~--t~d~~ea~~~a-   79 (331)
T 1pzg_A            9 RKKVAMI----GS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV-DTNVSVRA--EYSYEAALTGA-   79 (331)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT-TCCCCEEE--ECSHHHHHTTC-
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc-CCCCEEEE--eCCHHHHhCCC-
Confidence            4799999    87 9999999999999998 99999998765443100000000000 01122221  13455567777 


Q ss_pred             ccEEEeCCCCC-------------------hhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKN-------------------LDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~-------------------~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       |+||-+++..                   ....+.+.+.+.+...+-++...|
T Consensus        80 -DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           80 -DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             -SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             -CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence             9999998532                   122566777766665443433333

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.23  E-value=0.2  Score=46.97  Aligned_cols=105  Identities=12%  Similarity=0.159  Sum_probs=67.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT  136 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~  136 (401)
                      ....+|+|+     |.|.+|.++++.|...|. ++++++++.-....+.++......++.              .+.+++
T Consensus        32 L~~~~VlIv-----GaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v  106 (340)
T 3rui_A           32 IKNTKVLLL-----GAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDA  106 (340)
T ss_dssp             HHTCEEEEE-----CCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEE
T ss_pred             HhCCEEEEE-----CCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEE
Confidence            346899999     678899999999999996 788888877444444333222222111              134443


Q ss_pred             EEc-------------------CHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEe
Q 015746          137 VWG-------------------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       137 ~~~-------------------D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                      ...                   +.+.+..++.++  |+||++... ...-..+-++|.+.++ .+|..
T Consensus       107 ~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~--DlVvd~tDn-~~tR~lin~~c~~~~~-plI~a  170 (340)
T 3rui_A          107 TGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEH--DIIFLLVDS-RESRWLPSLLSNIENK-TVINA  170 (340)
T ss_dssp             EEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHC--SEEEECCSS-TGGGHHHHHHHHHTTC-EEEEE
T ss_pred             EEEeccccccCcccchhhhhcCCHHHHHhhhccC--CEEEecCCC-HHHHHHHHHHHHHcCC-cEEEe
Confidence            322                   234456677765  999998653 4444556678888887 46654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.23  E-value=0.034  Score=51.18  Aligned_cols=93  Identities=15%  Similarity=0.180  Sum_probs=61.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|+    | .|.||+.+++.|...|.+|++.+|..++...           +...+++.+  +.+++.+++.++
T Consensus       153 l~g~~v~Ii----G-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~-----------~~~~g~~~~--~~~~l~~~l~~a  214 (293)
T 3d4o_A          153 IHGANVAVL----G-LGRVGMSVARKFAALGAKVKVGARESDLLAR-----------IAEMGMEPF--HISKAAQELRDV  214 (293)
T ss_dssp             STTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-----------HHHTTSEEE--EGGGHHHHTTTC
T ss_pred             CCCCEEEEE----e-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-----------HHHCCCeec--ChhhHHHHhcCC
Confidence            457899999    6 7999999999999999999999998743211           111244433  345677777776


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                        |+|+.+....+... ..++.++. + ..+|.++.
T Consensus       215 --DvVi~~~p~~~i~~-~~l~~mk~-~-~~lin~ar  245 (293)
T 3d4o_A          215 --DVCINTIPALVVTA-NVLAEMPS-H-TFVIDLAS  245 (293)
T ss_dssp             --SEEEECCSSCCBCH-HHHHHSCT-T-CEEEECSS
T ss_pred             --CEEEECCChHHhCH-HHHHhcCC-C-CEEEEecC
Confidence              99998876543322 23444433 2 24666653

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.22  E-value=0.0062  Score=56.92  Aligned_cols=92  Identities=14%  Similarity=0.171  Sum_probs=58.9

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhH--HHhhcCCcc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV--GNVVGGVTF  153 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~--~~~~~~~~~  153 (401)
                      +|||+    ||+|-+|...++.+...|.+|+++++++++.+.++        +   .+.+.+. |..+.  .+.+.+.++
T Consensus       149 ~VlV~----Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~--------~---lGa~~vi-~~~~~~~~~~~~~~~~  212 (324)
T 3nx4_A          149 EVVVT----GASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK--------S---LGANRIL-SRDEFAESRPLEKQLW  212 (324)
T ss_dssp             CEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH--------H---HTCSEEE-EGGGSSCCCSSCCCCE
T ss_pred             eEEEE----CCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------h---cCCCEEE-ecCCHHHHHhhcCCCc
Confidence            49999    99999999999999999999999998876543221        1   1332221 21111  111222358


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      |+||++.|.  ......++.++..|  ++|.++.
T Consensus       213 d~v~d~~g~--~~~~~~~~~l~~~G--~iv~~G~  242 (324)
T 3nx4_A          213 AGAIDTVGD--KVLAKVLAQMNYGG--CVAACGL  242 (324)
T ss_dssp             EEEEESSCH--HHHHHHHHTEEEEE--EEEECCC
T ss_pred             cEEEECCCc--HHHHHHHHHHhcCC--EEEEEec
Confidence            999999884  24444444444444  6887764

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=95.19  E-value=0.053  Score=49.82  Aligned_cols=92  Identities=13%  Similarity=0.087  Sum_probs=60.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +.++|.|+    |++|.+|+.+++.|++.|+++++..... +...          +.  .++.++ .|   +.++.+...
T Consensus         6 ~~~rVaVi----G~sG~~G~~~~~~l~~~g~~~V~~V~p~-~~g~----------~~--~G~~vy-~s---l~el~~~~~   64 (288)
T 2nu8_A            6 KNTKVICQ----GFTGSQGTFHSEQAIAYGTKMVGGVTPG-KGGT----------TH--LGLPVF-NT---VREAVAATG   64 (288)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTT-CTTC----------EE--TTEEEE-SS---HHHHHHHHC
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCC-cccc----------ee--CCeecc-CC---HHHHhhcCC
Confidence            35799999    9999999999999999899855433322 1100          00  133332 23   444444223


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +|+++.+..  -..+..+++.|.+.|++.+|-+++
T Consensus        65 ~D~viI~tP--~~~~~~~~~ea~~~Gi~~iVi~t~   97 (288)
T 2nu8_A           65 ATASVIYVP--APFCKDSILEAIDAGIKLIITITE   97 (288)
T ss_dssp             CCEEEECCC--GGGHHHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEecC--HHHHHHHHHHHHHCCCCEEEEECC
Confidence            699998765  567788888888999876565554

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=95.18  E-value=0.24  Score=45.98  Aligned_cols=93  Identities=11%  Similarity=0.115  Sum_probs=59.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHh----
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV----  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~----  147 (401)
                      .|++|-|+    |..|++|...++.|.+.+.+++++. ++++. ..        +... .++.. +..|.+++.+.    
T Consensus         2 ~mirvgiI----G~gG~i~~~h~~~l~~~~~~lvav~d~~~~~-~~--------~~~~-~~~~~-~~~~~~~ll~~~~~l   66 (318)
T 3oa2_A            2 HMKNFALI----GAAGYIAPRHMRAIKDTGNCLVSAYDINDSV-GI--------IDSI-SPQSE-FFTEFEFFLDHASNL   66 (318)
T ss_dssp             -CCEEEEE----TTTSSSHHHHHHHHHHTTCEEEEEECSSCCC-GG--------GGGT-CTTCE-EESSHHHHHHHHHHH
T ss_pred             CceEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH-HH--------HHhh-CCCCc-EECCHHHHHHhhhhh
Confidence            37899999    8889999999999999888877765 44332 11        1111 11233 33455444321    


Q ss_pred             h--cCCcccEEEeCCC-------------------------CChhhHHHHHHHHHhCCCC
Q 015746          148 V--GGVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       148 ~--~~~~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv~  180 (401)
                      .  .+..+|+|+-+..                         .+......+++++++.|+.
T Consensus        67 ~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~  126 (318)
T 3oa2_A           67 KRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKR  126 (318)
T ss_dssp             TTSTTTSCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCC
T ss_pred             hhccCCCCcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCE
Confidence            1  2445799886544                         2577778888888888763

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.18  E-value=0.063  Score=52.64  Aligned_cols=90  Identities=24%  Similarity=0.273  Sum_probs=59.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      .+++|+|+    |. |-.|..+++.|.++||+|++.++.......       ....+...++++..+...+  ..+.+ .
T Consensus         8 ~~k~v~vi----G~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~-------~~~~L~~~gi~~~~g~~~~--~~~~~-~   72 (451)
T 3lk7_A            8 ENKKVLVL----GL-ARSGEAAARLLAKLGAIVTVNDGKPFDENP-------TAQSLLEEGIKVVCGSHPL--ELLDE-D   72 (451)
T ss_dssp             TTCEEEEE----CC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCH-------HHHHHHHTTCEEEESCCCG--GGGGS-C
T ss_pred             CCCEEEEE----ee-CHHHHHHHHHHHhCCCEEEEEeCCcccCCh-------HHHHHHhCCCEEEECCChH--HhhcC-C
Confidence            46899999    76 889999999999999999999986532111       1234555688888775211  23333 1


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                      +|.||...|+....  ..+..+++.|+
T Consensus        73 ~d~vv~spgi~~~~--p~~~~a~~~gi   97 (451)
T 3lk7_A           73 FCYMIKNPGIPYNN--PMVKKALEKQI   97 (451)
T ss_dssp             EEEEEECTTSCTTS--HHHHHHHHTTC
T ss_pred             CCEEEECCcCCCCC--hhHHHHHHCCC
Confidence            59999988864322  23444444443

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=95.17  E-value=0.065  Score=42.38  Aligned_cols=99  Identities=18%  Similarity=0.203  Sum_probs=57.0

Q ss_pred             cCeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhh----HHH
Q 015746           74 KKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE----VGN  146 (401)
Q Consensus        74 ~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~----~~~  146 (401)
                      +++|.|+    |++   +-.|..+.+.|++.||+|+.+.-..+.....+.  ...+.++...++-++...++.    +++
T Consensus         4 p~siAVV----GaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~--y~sl~dlp~vDlavi~~p~~~v~~~v~e   77 (122)
T 3ff4_A            4 MKKTLIL----GATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTI--INERPVIEGVDTVTLYINPQNQLSEYNY   77 (122)
T ss_dssp             CCCEEEE----TCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEEC--BCSCCCCTTCCEEEECSCHHHHGGGHHH
T ss_pred             CCEEEEE----ccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeec--cCChHHCCCCCEEEEEeCHHHHHHHHHH
Confidence            5789999    997   568999999999999998887654433222111  112222222122222222333    333


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +.+. ++..|+-..|..   ...+++.|++.|+ ++|
T Consensus        78 ~~~~-g~k~v~~~~G~~---~~e~~~~a~~~Gi-rvv  109 (122)
T 3ff4_A           78 ILSL-KPKRVIFNPGTE---NEELEEILSENGI-EPV  109 (122)
T ss_dssp             HHHH-CCSEEEECTTCC---CHHHHHHHHHTTC-EEE
T ss_pred             HHhc-CCCEEEECCCCC---hHHHHHHHHHcCC-eEE
Confidence            3221 234566556642   3577888888887 566

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=95.15  E-value=0.017  Score=54.45  Aligned_cols=97  Identities=18%  Similarity=0.271  Sum_probs=61.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EE-EcC---HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGD---PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~D---~~~~~~  146 (401)
                      .+++|||+    ||+|.||..+++.+... |++|+++++++++.+.++        ++   +.. ++ ..|   .+.+.+
T Consensus       170 ~g~~vlV~----Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~--------~~---g~~~~~~~~~~~~~~~~~~  234 (347)
T 1jvb_A          170 PTKTLLVV----GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK--------RA---GADYVINASMQDPLAEIRR  234 (347)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH--------HH---TCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----CCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH--------Hh---CCCEEecCCCccHHHHHHH
Confidence            46799999    99999999999999999 999999998775443211        11   222 22 222   223444


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +...-++|+||+++|.. ......++.++..|  ++|.++.
T Consensus       235 ~~~~~~~d~vi~~~g~~-~~~~~~~~~l~~~G--~iv~~g~  272 (347)
T 1jvb_A          235 ITESKGVDAVIDLNNSE-KTLSVYPKALAKQG--KYVMVGL  272 (347)
T ss_dssp             HTTTSCEEEEEESCCCH-HHHTTGGGGEEEEE--EEEECCS
T ss_pred             HhcCCCceEEEECCCCH-HHHHHHHHHHhcCC--EEEEECC
Confidence            44312589999999852 12233334443333  6887664

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=95.14  E-value=0.024  Score=54.28  Aligned_cols=96  Identities=17%  Similarity=0.243  Sum_probs=62.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC---Hhh----
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD---PAE----  143 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D---~~~----  143 (401)
                      .+.+|||+    | +|-+|...++.+...| .+|+++++++++.+.+           ...+.+ ++..+   .++    
T Consensus       195 ~g~~VlV~----G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~~~~  258 (380)
T 1vj0_A          195 AGKTVVIQ----G-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-----------EEIGADLTLNRRETSVEERRKA  258 (380)
T ss_dssp             BTCEEEEE----C-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----C-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-----------HHcCCcEEEeccccCcchHHHH
Confidence            46799999    9 8999999999999999 6999999887554321           112333 23222   223    


Q ss_pred             HHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +.++..+.++|+||++.+.. ......++.++..|  ++|.++.
T Consensus       259 v~~~~~g~g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~G~  299 (380)
T 1vj0_A          259 IMDITHGRGADFILEATGDS-RALLEGSELLRRGG--FYSVAGV  299 (380)
T ss_dssp             HHHHTTTSCEEEEEECSSCT-THHHHHHHHEEEEE--EEEECCC
T ss_pred             HHHHhCCCCCcEEEECCCCH-HHHHHHHHHHhcCC--EEEEEec
Confidence            33333344689999999842 23444556555554  6887764

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.13  E-value=0.068  Score=48.96  Aligned_cols=37  Identities=24%  Similarity=0.283  Sum_probs=32.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      |+|.|+    | .|.+|..+++.|.+.|++|++.+|++++..
T Consensus         1 m~i~ii----G-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~   37 (296)
T 2gf2_A            1 MPVGFI----G-LGNMGNPMAKNLMKHGYPLIIYDVFPDACK   37 (296)
T ss_dssp             CCEEEE----C-CSTTHHHHHHHHHHTTCCEEEECSSTHHHH
T ss_pred             CeEEEE----e-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            579999    5 799999999999999999999999876544

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.12  E-value=0.03  Score=53.90  Aligned_cols=97  Identities=19%  Similarity=0.165  Sum_probs=63.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~  146 (401)
                      .+.+|||+    |+ |-||...++.+...|. +|+++++++++.+.+           ...+.+++..+     .+.+.+
T Consensus       185 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~i~~~~~~~~~~~~~~  248 (398)
T 2dph_A          185 PGSHVYIA----GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-----------SDAGFETIDLRNSAPLRDQIDQ  248 (398)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-----------HTTTCEEEETTSSSCHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-----------HHcCCcEEcCCCcchHHHHHHH
Confidence            46799999    96 9999999998888898 899999887654322           11244433222     233444


Q ss_pred             hhcCCcccEEEeCCCCCh-------------hhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNL-------------DAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~-------------~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +..+.++|+||++.+...             ......++.++..|  +++.++.
T Consensus       249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG--~iv~~G~  300 (398)
T 2dph_A          249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGG--AIGIPGI  300 (398)
T ss_dssp             HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEE--EEECCSC
T ss_pred             HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCC--EEEEecc
Confidence            444446899999998642             23455566665554  6776653

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.12  E-value=0.083  Score=50.27  Aligned_cols=97  Identities=14%  Similarity=0.085  Sum_probs=60.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~  146 (401)
                      ..+.+|||+    ||+|.+|...++.+...|.+|+++. ++++.+           .+...+.+ ++..+    .+.+.+
T Consensus       163 ~~g~~VlV~----Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-----------~~~~lGa~~vi~~~~~~~~~~v~~  226 (371)
T 3gqv_A          163 SKPVYVLVY----GGSTATATVTMQMLRLSGYIPIATC-SPHNFD-----------LAKSRGAEEVFDYRAPNLAQTIRT  226 (371)
T ss_dssp             SSCCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-----------HHHHTTCSEEEETTSTTHHHHHHH
T ss_pred             CCCcEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-----------HHHHcCCcEEEECCCchHHHHHHH
Confidence            346789999    9999999999999999999998886 343322           12222333 23222    233444


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +..+ ++|+||++.|.. ......++.+.+.+ .++|.++.
T Consensus       227 ~t~g-~~d~v~d~~g~~-~~~~~~~~~l~~~~-G~iv~~g~  264 (371)
T 3gqv_A          227 YTKN-NLRYALDCITNV-ESTTFCFAAIGRAG-GHYVSLNP  264 (371)
T ss_dssp             HTTT-CCCEEEESSCSH-HHHHHHHHHSCTTC-EEEEESSC
T ss_pred             HccC-CccEEEECCCch-HHHHHHHHHhhcCC-CEEEEEec
Confidence            4334 489999998842 22333444442222 37887763

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=95.12  E-value=0.03  Score=53.10  Aligned_cols=100  Identities=14%  Similarity=0.151  Sum_probs=60.1

Q ss_pred             cc-CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcC-------Hhh
Q 015746           73 EK-KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD-------PAE  143 (401)
Q Consensus        73 ~~-~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D-------~~~  143 (401)
                      .+ .+|||+    ||+|-+|...++.+...|.+|++++++.++...       +...+...+.+. +..+       .+.
T Consensus       166 ~g~~~VlV~----Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~-------~~~~~~~lGa~~vi~~~~~~~~~~~~~  234 (364)
T 1gu7_A          166 PGKDWFIQN----GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDE-------VVASLKELGATQVITEDQNNSREFGPT  234 (364)
T ss_dssp             TTTCEEEES----CTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHH-------HHHHHHHHTCSEEEEHHHHHCGGGHHH
T ss_pred             CCCcEEEEC----CCCcHHHHHHHHHHHHCCCEEEEEecCccccHH-------HHHHHHhcCCeEEEecCccchHHHHHH
Confidence            45 799999    999999999999998889999999877654100       000111113332 2111       112


Q ss_pred             HHHhh--cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          144 VGNVV--GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       144 ~~~~~--~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +.++.  .+.++|+||++.|..  .....++.++..|  ++|.++.
T Consensus       235 i~~~t~~~~~g~Dvvid~~G~~--~~~~~~~~l~~~G--~~v~~g~  276 (364)
T 1gu7_A          235 IKEWIKQSGGEAKLALNCVGGK--SSTGIARKLNNNG--LMLTYGG  276 (364)
T ss_dssp             HHHHHHHHTCCEEEEEESSCHH--HHHHHHHTSCTTC--EEEECCC
T ss_pred             HHHHhhccCCCceEEEECCCch--hHHHHHHHhccCC--EEEEecC
Confidence            33332  244689999998842  2224445554444  7887764

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.11  E-value=0.13  Score=48.47  Aligned_cols=111  Identities=16%  Similarity=0.141  Sum_probs=71.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCc---------------ccchhcCCCeE
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR---------------FNEIVSAGGKT  136 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~---------------~~~l~~~~~~~  136 (401)
                      ...+|||+    | .|.+|..+++.|...|. ++++++.+.-....+..+-+..               +.++ .+.+++
T Consensus        35 ~~~~Vliv----G-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~l-np~v~v  108 (346)
T 1y8q_A           35 RASRVLLV----G-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNL-NPMVDV  108 (346)
T ss_dssp             HTCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHT-CTTSEE
T ss_pred             hCCeEEEE----C-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhH-CCCeEE
Confidence            45799999    5 57799999999999997 7888876553322222211111               1111 133433


Q ss_pred             E--EcCH-hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          137 V--WGDP-AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       137 ~--~~D~-~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      .  ..+. +.....+.++  |+||.+.. +...-..+-++|++.++ .||..++.+.+|.
T Consensus       109 ~~~~~~~~~~~~~~~~~~--dvVv~~~d-~~~~r~~ln~~~~~~~i-p~i~~~~~G~~G~  164 (346)
T 1y8q_A          109 KVDTEDIEKKPESFFTQF--DAVCLTCC-SRDVIVKVDQICHKNSI-KFFTGDVFGYHGY  164 (346)
T ss_dssp             EEECSCGGGCCHHHHTTC--SEEEEESC-CHHHHHHHHHHHHHTTC-EEEEEEEEBTEEE
T ss_pred             EEEecccCcchHHHhcCC--CEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEeecccEEE
Confidence            3  2232 2234566664  99998753 56777778889999987 5898888777764

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.10  E-value=0.011  Score=55.19  Aligned_cols=93  Identities=16%  Similarity=0.166  Sum_probs=59.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcCHhh-HHHhhc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAE-VGNVVG  149 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D~~~-~~~~~~  149 (401)
                      ..+.+|||+    ||+|.+|...++.+...|.+|+++++... .+           .+...+.+ ++..+.++ +.+.+.
T Consensus       151 ~~g~~vlV~----Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~-----------~~~~lGa~~~i~~~~~~~~~~~~~  214 (321)
T 3tqh_A          151 KQGDVVLIH----AGAGGVGHLAIQLAKQKGTTVITTASKRN-HA-----------FLKALGAEQCINYHEEDFLLAIST  214 (321)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEECHHH-HH-----------HHHHHTCSEEEETTTSCHHHHCCS
T ss_pred             CCCCEEEEE----cCCcHHHHHHHHHHHHcCCEEEEEeccch-HH-----------HHHHcCCCEEEeCCCcchhhhhcc
Confidence            346799999    99999999999999999999998875432 21           11112333 33223333 666665


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +  +|+||++.|..  .....++.++..|  ++|.++
T Consensus       215 g--~D~v~d~~g~~--~~~~~~~~l~~~G--~iv~~g  245 (321)
T 3tqh_A          215 P--VDAVIDLVGGD--VGIQSIDCLKETG--CIVSVP  245 (321)
T ss_dssp             C--EEEEEESSCHH--HHHHHGGGEEEEE--EEEECC
T ss_pred             C--CCEEEECCCcH--HHHHHHHhccCCC--EEEEeC
Confidence            4  69999998842  2244444444444  677654

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=95.01  E-value=0.048  Score=53.89  Aligned_cols=41  Identities=22%  Similarity=0.394  Sum_probs=36.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK  119 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~  119 (401)
                      .|+|.|+     |.|++|..++..|.+.||+|++++|++++.+.+.
T Consensus         8 ~~~I~VI-----G~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~   48 (478)
T 2y0c_A            8 SMNLTII-----GSGSVGLVTGACLADIGHDVFCLDVDQAKIDILN   48 (478)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CceEEEE-----CcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            5899999     7999999999999999999999999886655443

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=95.01  E-value=0.09  Score=50.04  Aligned_cols=95  Identities=14%  Similarity=0.216  Sum_probs=60.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-----C-HhhH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-----D-PAEV  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-----D-~~~~  144 (401)
                      .+.+|||+    |+ |-||...++.+...|. +|+++++++++.+.+           ...+.+.+. .     | .+.+
T Consensus       195 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~vi~~~~~~~~~~~~v  258 (376)
T 1e3i_A          195 PGSTCAVF----GL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-----------KALGATDCLNPRELDKPVQDVI  258 (376)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-----------HHhCCcEEEccccccchHHHHH
Confidence            45799999    86 9999999999999998 799998877654322           112333221 1     1 1223


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISS  187 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS  187 (401)
                      .++..+ ++|+||++.|. -......++.++.. |  ++|.++.
T Consensus       259 ~~~~~~-g~Dvvid~~G~-~~~~~~~~~~l~~~~G--~iv~~G~  298 (376)
T 1e3i_A          259 TELTAG-GVDYSLDCAGT-AQTLKAAVDCTVLGWG--SCTVVGA  298 (376)
T ss_dssp             HHHHTS-CBSEEEESSCC-HHHHHHHHHTBCTTTC--EEEECCC
T ss_pred             HHHhCC-CccEEEECCCC-HHHHHHHHHHhhcCCC--EEEEECC
Confidence            333334 68999999884 22334445555444 4  7887764

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=94.98  E-value=0.065  Score=50.11  Aligned_cols=87  Identities=18%  Similarity=0.031  Sum_probs=59.5

Q ss_pred             ccCeEEEEecCCCccccchH-HHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-HhhHHHhh-c
Q 015746           73 EKKKVLIVNTNSGGHAVIGF-YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVV-G  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~-~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~-~  149 (401)
                      .+|+|.|+     |-|.+|. .+++.|+++|++|.+.++.....         ....+...++++..+. ++.   +. .
T Consensus         3 ~~~~i~~i-----GiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~---------~~~~L~~~gi~v~~g~~~~~---l~~~   65 (326)
T 3eag_A            3 AMKHIHII-----GIGGTFMGGLAAIAKEAGFEVSGCDAKMYPP---------MSTQLEALGIDVYEGFDAAQ---LDEF   65 (326)
T ss_dssp             CCCEEEEE-----SCCSHHHHHHHHHHHHTTCEEEEEESSCCTT---------HHHHHHHTTCEEEESCCGGG---GGSC
T ss_pred             CCcEEEEE-----EECHHHHHHHHHHHHhCCCEEEEEcCCCCcH---------HHHHHHhCCCEEECCCCHHH---cCCC
Confidence            36899999     5677888 49999999999999999865321         1234555688888764 332   22 2


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      +  +|.||...|+...  ...+..+++.|++
T Consensus        66 ~--~d~vV~Spgi~~~--~p~~~~a~~~gi~   92 (326)
T 3eag_A           66 K--ADVYVIGNVAKRG--MDVVEAILNLGLP   92 (326)
T ss_dssp             C--CSEEEECTTCCTT--CHHHHHHHHTTCC
T ss_pred             C--CCEEEECCCcCCC--CHHHHHHHHcCCc
Confidence            3  5999999886433  2345666676664

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=94.97  E-value=0.0089  Score=54.54  Aligned_cols=40  Identities=15%  Similarity=0.155  Sum_probs=34.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      ..+++|+|+    |+ |.+|+.++..|++.|++|++.+|+.++..
T Consensus       117 ~~~~~vlvl----Ga-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~  156 (272)
T 1p77_A          117 RPNQHVLIL----GA-GGATKGVLLPLLQAQQNIVLANRTFSKTK  156 (272)
T ss_dssp             CTTCEEEEE----CC-SHHHHTTHHHHHHTTCEEEEEESSHHHHH
T ss_pred             cCCCEEEEE----CC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            346899999    87 77999999999999999999999986554

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=94.97  E-value=0.035  Score=53.13  Aligned_cols=86  Identities=14%  Similarity=0.084  Sum_probs=57.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE---cCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---GDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~D~~~~~~~~~  149 (401)
                      ++|+|||+    |+ |.+|+.+++.+.+.|++|++++..+.....       .+   .   -+.+.   .|.+.+.++.+
T Consensus        10 ~~~~ili~----g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-------~~---~---d~~~~~~~~d~~~l~~~~~   71 (391)
T 1kjq_A           10 AATRVMLL----GS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-------HV---A---HRSHVINMLDGDALRRVVE   71 (391)
T ss_dssp             TCCEEEEE----SC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-------GG---S---SEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-------hh---c---cceEECCCCCHHHHHHHHH
Confidence            35899999    76 689999999999999999999876543211       00   0   01222   25666666665


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCC
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv  179 (401)
                      ..++|+|+.....-.   .++++.+.+.|+
T Consensus        72 ~~~~d~v~~~~e~~~---~~~~~~l~~~gi   98 (391)
T 1kjq_A           72 LEKPHYIVPEIEAIA---TDMLIQLEEEGL   98 (391)
T ss_dssp             HHCCSEEEECSSCSC---HHHHHHHHHTTC
T ss_pred             HcCCCEEEECCCcCC---HHHHHHHHhCCC
Confidence            446799987654221   245677777786

>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}

Probab=94.97  E-value=0.072  Score=52.23  Aligned_cols=101  Identities=10%  Similarity=0.078  Sum_probs=58.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcCHhhHHHhhc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D~~~~~~~~~  149 (401)
                      .++++|||+    |+ |.+|..+++.+.+.|++|++++...+......... ...-.+..  ..+. ...|.+.+.++.+
T Consensus         4 ~~~k~ILI~----g~-g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~a-d~~~~i~~~~~~~~-~y~d~~~l~~~~~   76 (461)
T 2dzd_A            4 RRIRKVLVA----NR-GEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKA-DEAYLVGEGKKPIE-AYLDIEGIIEIAK   76 (461)
T ss_dssp             CCCSEEEEC----SC-HHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHHS-SSEEECSTTSCTTG-GGTCHHHHHHHHH
T ss_pred             CcCcEEEEE----CC-cHHHHHHHHHHHHcCCEEEEEECCcccccchhhhC-CEEEEcCCCCCccc-cccCHHHHHHHHH
Confidence            356899999    65 67899999999999999999986553211000000 00000000  0000 0125667777776


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      ..++|+|+-..+...+. ..+.+.+.+.|++
T Consensus        77 ~~~id~v~~~~g~~~E~-~~~~~~~~~~gi~  106 (461)
T 2dzd_A           77 AHDVDAIHPGYGFLSEN-IQFAKRCREEGII  106 (461)
T ss_dssp             HTTCCEEECCSSSSTTC-HHHHHHHHHTTCE
T ss_pred             HhCCCEEEECCCccccC-HHHHHHHHHcCCE
Confidence            66789998654421121 2467777788873

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=94.97  E-value=0.048  Score=51.50  Aligned_cols=90  Identities=20%  Similarity=0.193  Sum_probs=57.5

Q ss_pred             cccCeEEEEecCCCccccchH-HHHHHHHhC-CCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGF-YLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~-~l~~~Ll~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~  148 (401)
                      +++++|.|+     |.|.+|+ ..++.|.+. +.+|+++ +|+.++...        +.+.  .++..+    .++++++
T Consensus        25 m~~~rigiI-----G~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~--------~a~~--~g~~~~----~~~~~ll   85 (350)
T 3rc1_A           25 ANPIRVGVI-----GCADIAWRRALPALEAEPLTEVTAIASRRWDRAKR--------FTER--FGGEPV----EGYPALL   85 (350)
T ss_dssp             -CCEEEEEE-----SCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHH--------HHHH--HCSEEE----ESHHHHH
T ss_pred             CCceEEEEE-----cCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHH--------HHHH--cCCCCc----CCHHHHh
Confidence            445799999     5799998 788998887 6787754 566543321        1111  144433    4455666


Q ss_pred             cCCcccEEEeCCC-------------------------CChhhHHHHHHHHHhCCCC
Q 015746          149 GGVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       149 ~~~~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv~  180 (401)
                      .+..+|+|+-+..                         .++.....+++++++.|+.
T Consensus        86 ~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~  142 (350)
T 3rc1_A           86 ERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLL  142 (350)
T ss_dssp             TCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred             cCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence            6555788886544                         2567777788888777763

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=94.96  E-value=0.015  Score=54.89  Aligned_cols=95  Identities=12%  Similarity=0.225  Sum_probs=62.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hh-HHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AE-VGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~-~~~  146 (401)
                      .+.+|||+    |+ |-||...++.+...  |.+|+++++++++.+.+           ...+.+.+. |.   ++ ..+
T Consensus       170 ~g~~VlV~----Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~vi-~~~~~~~~~~~  232 (344)
T 2h6e_A          170 AEPVVIVN----GI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-----------LELGADYVS-EMKDAESLINK  232 (344)
T ss_dssp             SSCEEEEE----CC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-----------HHHTCSEEE-CHHHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-----------HHhCCCEEe-ccccchHHHHH
Confidence            56899999    99 99999999999998  99999999877544321           111333221 32   22 333


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +..+.++|+||++.+.. ......++.++..|  ++|.++.
T Consensus       233 ~~~g~g~D~vid~~g~~-~~~~~~~~~l~~~G--~iv~~g~  270 (344)
T 2h6e_A          233 LTDGLGASIAIDLVGTE-ETTYNLGKLLAQEG--AIILVGM  270 (344)
T ss_dssp             HHTTCCEEEEEESSCCH-HHHHHHHHHEEEEE--EEEECCC
T ss_pred             hhcCCCccEEEECCCCh-HHHHHHHHHhhcCC--EEEEeCC
Confidence            33344589999999852 24455556655544  6887664

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=94.95  E-value=0.11  Score=49.37  Aligned_cols=95  Identities=12%  Similarity=0.211  Sum_probs=60.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-----C-HhhH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-----D-PAEV  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-----D-~~~~  144 (401)
                      ...+|||+    |+ |-||...++.+...|. +|+++++++++.+.+           ...+.+.+. .     | .+.+
T Consensus       191 ~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~~~~  254 (374)
T 2jhf_A          191 QGSTCAVF----GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-----------KEVGATECVNPQDYKKPIQEVL  254 (374)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-----------HHhCCceEecccccchhHHHHH
Confidence            45799999    85 9999999999999998 799998887654322           112333221 1     1 1223


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISS  187 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS  187 (401)
                      .++..+ ++|+||++.+. -......++.++.. |  ++|.++.
T Consensus       255 ~~~~~~-g~D~vid~~g~-~~~~~~~~~~l~~~~G--~iv~~G~  294 (374)
T 2jhf_A          255 TEMSNG-GVDFSFEVIGR-LDTMVTALSCCQEAYG--VSVIVGV  294 (374)
T ss_dssp             HHHTTS-CBSEEEECSCC-HHHHHHHHHHBCTTTC--EEEECSC
T ss_pred             HHHhCC-CCcEEEECCCC-HHHHHHHHHHhhcCCc--EEEEecc
Confidence            333333 68999999884 22344555555554 4  6887763

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=94.95  E-value=0.06  Score=51.35  Aligned_cols=96  Identities=14%  Similarity=0.205  Sum_probs=62.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-----C-HhhH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-----D-PAEV  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-----D-~~~~  144 (401)
                      .+.+|||+    |+ |-||...++.+...|. +|+++++++++.+..++           -+.+.+. .     | .+.+
T Consensus       193 ~g~~VlV~----Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-----------lGa~~vi~~~~~~~~~~~~i  256 (378)
T 3uko_A          193 PGSNVAIF----GL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-----------FGVNEFVNPKDHDKPIQEVI  256 (378)
T ss_dssp             TTCCEEEE----CC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-----------TTCCEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-----------cCCcEEEccccCchhHHHHH
Confidence            46789999    98 8999999999999998 79999988866543221           1332221 1     1 3344


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .++..+ ++|+||++.|.. ......++.++.. -.+++.++.
T Consensus       257 ~~~~~g-g~D~vid~~g~~-~~~~~~~~~l~~g-~G~iv~~G~  296 (378)
T 3uko_A          257 VDLTDG-GVDYSFECIGNV-SVMRAALECCHKG-WGTSVIVGV  296 (378)
T ss_dssp             HHHTTS-CBSEEEECSCCH-HHHHHHHHTBCTT-TCEEEECSC
T ss_pred             HHhcCC-CCCEEEECCCCH-HHHHHHHHHhhcc-CCEEEEEcc
Confidence            455455 789999998842 2334444544442 137887764

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=94.94  E-value=0.1  Score=49.61  Aligned_cols=95  Identities=13%  Similarity=0.200  Sum_probs=60.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-----C-HhhH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-----D-PAEV  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-----D-~~~~  144 (401)
                      .+.+|||+    |+ |-+|...++.+...|. +|+++++++++.+.++           ..+.+.+. .     | .+.+
T Consensus       192 ~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~~  255 (374)
T 1cdo_A          192 PGSTCAVF----GL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-----------VFGATDFVNPNDHSEPISQVL  255 (374)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCCEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-----------HhCCceEEeccccchhHHHHH
Confidence            45799999    85 9999999999999998 7999988776543221           12332221 1     1 1223


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISS  187 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS  187 (401)
                      .++..+ ++|+||++.+.. ......++.++.. |  ++|.++.
T Consensus       256 ~~~~~~-g~D~vid~~g~~-~~~~~~~~~l~~~~G--~iv~~G~  295 (374)
T 1cdo_A          256 SKMTNG-GVDFSLECVGNV-GVMRNALESCLKGWG--VSVLVGW  295 (374)
T ss_dssp             HHHHTS-CBSEEEECSCCH-HHHHHHHHTBCTTTC--EEEECSC
T ss_pred             HHHhCC-CCCEEEECCCCH-HHHHHHHHHhhcCCc--EEEEEcC
Confidence            333334 689999998842 2334445555444 4  7887764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=94.93  E-value=0.012  Score=55.11  Aligned_cols=92  Identities=18%  Similarity=0.227  Sum_probs=57.9

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhH-HH---hhcCC
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV-GN---VVGGV  151 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~-~~---~~~~~  151 (401)
                      +|||+    ||+|.+|...++.+...|++|+++++++++.+.++        .   .+.+.+. |..+. ..   .+.+.
T Consensus       153 ~VlV~----Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~--------~---lGa~~v~-~~~~~~~~~~~~~~~~  216 (330)
T 1tt7_A          153 SVLVT----GATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK--------Q---LGASEVI-SREDVYDGTLKALSKQ  216 (330)
T ss_dssp             CEEEE----STTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH--------H---HTCSEEE-EHHHHCSSCCCSSCCC
T ss_pred             eEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------H---cCCcEEE-ECCCchHHHHHHhhcC
Confidence            79999    99999999999999999999999999876543211        1   1332221 32222 11   11223


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ++|+||++.|.  ......++.++..|  +++.++.
T Consensus       217 ~~d~vid~~g~--~~~~~~~~~l~~~G--~iv~~G~  248 (330)
T 1tt7_A          217 QWQGAVDPVGG--KQLASLLSKIQYGG--SVAVSGL  248 (330)
T ss_dssp             CEEEEEESCCT--HHHHHHHTTEEEEE--EEEECCC
T ss_pred             CccEEEECCcH--HHHHHHHHhhcCCC--EEEEEec
Confidence            58999999985  23333444443333  6887653

>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}

Probab=94.92  E-value=0.15  Score=40.87  Aligned_cols=96  Identities=21%  Similarity=0.188  Sum_probs=66.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      .++++|.     |+|..|..+++.|.+. ||+|+++..+......         ..+  .++.++ + .+++.+.++..+
T Consensus         4 ~~~vlIi-----GaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g---------~~i--~g~pV~-g-~~~l~~~~~~~~   65 (141)
T 3nkl_A            4 KKKVLIY-----GAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHK---------TTM--QGITIY-R-PKYLERLIKKHC   65 (141)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTT---------CEE--TTEEEE-C-GGGHHHHHHHHT
T ss_pred             CCEEEEE-----CCCHHHHHHHHHHHhCCCcEEEEEEECCcccCC---------CEe--cCeEEE-C-HHHHHHHHHHCC
Confidence            5689999     5688999999999876 8999887765432110         001  144443 4 677888877666


Q ss_pred             ccEEEeCCCC-ChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          153 FDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       153 ~d~Vv~~a~~-~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +|.|+-+.+. .-.....+++.|.+.|++ +..+-+.
T Consensus        66 id~viia~~~~~~~~~~~i~~~l~~~gv~-v~~vP~~  101 (141)
T 3nkl_A           66 ISTVLLAVPSASQVQKKVIIESLAKLHVE-VLTIPNL  101 (141)
T ss_dssp             CCEEEECCTTSCHHHHHHHHHHHHTTTCE-EEECCCH
T ss_pred             CCEEEEeCCCCCHHHHHHHHHHHHHcCCe-EEECCCH
Confidence            7888766553 345668899999999985 6555543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=94.91  E-value=0.047  Score=49.87  Aligned_cols=81  Identities=15%  Similarity=0.179  Sum_probs=55.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ++|+|.|+    | .|.+|..+++.|++.|+   +|++.+|++++...+...          .++.+.    .+..+++.
T Consensus         2 ~~~~I~iI----G-~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~----------~gi~~~----~~~~~~~~   62 (280)
T 3tri_A            2 NTSNITFI----G-GGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK----------CGVHTT----QDNRQGAL   62 (280)
T ss_dssp             CCSCEEEE----S-CSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT----------TCCEEE----SCHHHHHS
T ss_pred             CCCEEEEE----c-ccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH----------cCCEEe----CChHHHHh
Confidence            45899999    5 59999999999999999   999999988654432110          144432    23344566


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      ++  |+||-+.-  ......+++.++.
T Consensus        63 ~a--DvVilav~--p~~~~~vl~~l~~   85 (280)
T 3tri_A           63 NA--DVVVLAVK--PHQIKMVCEELKD   85 (280)
T ss_dssp             SC--SEEEECSC--GGGHHHHHHHHHH
T ss_pred             cC--CeEEEEeC--HHHHHHHHHHHHh
Confidence            65  99998763  3455566655543

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=94.91  E-value=0.11  Score=47.37  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=31.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      ||+|.|+    | .|.+|+.+++.|.+.|++|++.+ ++++..
T Consensus         3 ~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~   39 (295)
T 1yb4_A            3 AMKLGFI----G-LGIMGSPMAINLARAGHQLHVTT-IGPVAD   39 (295)
T ss_dssp             -CEEEEC----C-CSTTHHHHHHHHHHTTCEEEECC-SSCCCH
T ss_pred             CCEEEEE----c-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHH
Confidence            5799999    5 79999999999999999999887 665544

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=94.87  E-value=0.048  Score=50.82  Aligned_cols=102  Identities=17%  Similarity=0.186  Sum_probs=61.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +++||.|+    |+ |.+|..++..|+.+|.  +|++++.++++.......-.... .+....+++...+    .+.+++
T Consensus         5 ~~~KI~II----Ga-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v~~~~----~~a~~~   74 (317)
T 3d0o_A            5 KGNKVVLI----GN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSPTTVRVKAGE----YSDCHD   74 (317)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSSSCCEEEECC----GGGGTT
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcCCCeEEEeCC----HHHhCC
Confidence            45799999    98 9999999999998884  89999887643321100000000 1111234444322    344777


Q ss_pred             CcccEEEeCCCCC--------------hhhHHHHHHHHHhCCCC-EEEEec
Q 015746          151 VTFDVVLDNNGKN--------------LDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~~--------------~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      +  |+||.+++..              ....+.+.+.+.+.+.. .+|.+|
T Consensus        75 a--DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           75 A--DLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             C--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             C--CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            6  9999998853              34455666777666544 344433

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=94.84  E-value=0.075  Score=50.03  Aligned_cols=38  Identities=18%  Similarity=0.182  Sum_probs=33.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      +|+|.|+    | .|.+|..++..|.+.|++|++++|+++..+
T Consensus         4 ~mki~ii----G-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~   41 (359)
T 1bg6_A            4 SKTYAVL----G-LGNGGHAFAAYLALKGQSVLAWDIDAQRIK   41 (359)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             cCeEEEE----C-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence            4799999    6 599999999999999999999999875443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=94.80  E-value=0.029  Score=53.14  Aligned_cols=99  Identities=12%  Similarity=0.118  Sum_probs=59.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH-----hhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-----AEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~-----~~~~~~  147 (401)
                      .+.+|||+    ||+|-+|...++.+...|.+|+++++..++...       +.+.+...+.+.+. |.     +.+.++
T Consensus       167 ~g~~VlV~----Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~-------~~~~~~~lGa~~vi-~~~~~~~~~~~~~  234 (357)
T 1zsy_A          167 PGDSVIQN----ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK-------LSDRLKSLGAEHVI-TEEELRRPEMKNF  234 (357)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEECCCSCHHH-------HHHHHHHTTCSEEE-EHHHHHSGGGGGT
T ss_pred             CCCEEEEe----CCcCHHHHHHHHHHHHcCCEEEEEecCccchHH-------HHHHHHhcCCcEEE-ecCcchHHHHHHH
Confidence            46799999    999999999999888889999888876543110       00111122333322 22     233333


Q ss_pred             hcCC-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..+. ++|+||++.|..  .+...++.++..|  ++|.++.
T Consensus       235 ~~~~~~~Dvvid~~g~~--~~~~~~~~l~~~G--~iv~~G~  271 (357)
T 1zsy_A          235 FKDMPQPRLALNCVGGK--SSTELLRQLARGG--TMVTYGG  271 (357)
T ss_dssp             TSSSCCCSEEEESSCHH--HHHHHHTTSCTTC--EEEECCC
T ss_pred             HhCCCCceEEEECCCcH--HHHHHHHhhCCCC--EEEEEec
Confidence            3332 379999998832  2233444444433  7887753

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=94.79  E-value=0.062  Score=51.63  Aligned_cols=97  Identities=12%  Similarity=0.138  Sum_probs=63.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~  146 (401)
                      .+.+|||+    |+ |-||...++.+...|. .|+++++++++.+.           +...+++++..+     .+.+.+
T Consensus       185 ~g~~VlV~----Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~-----------a~~lGa~~i~~~~~~~~~~~v~~  248 (398)
T 1kol_A          185 PGSTVYVA----GA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH-----------AKAQGFEIADLSLDTPLHEQIAA  248 (398)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-----------HHHTTCEEEETTSSSCHHHHHHH
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH-----------HHHcCCcEEccCCcchHHHHHHH
Confidence            46799999    85 9999999999998998 68888887754432           122244433322     233444


Q ss_pred             hhcCCcccEEEeCCCCCh--------------hhHHHHHHHHHhCCCCEEEEecc
Q 015746          147 VVGGVTFDVVLDNNGKNL--------------DAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~--------------~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +..+.++|+||++.|...              ......++.++..|  +++.++.
T Consensus       249 ~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--~iv~~G~  301 (398)
T 1kol_A          249 LLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAG--KIGIPGL  301 (398)
T ss_dssp             HHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEE--EEEECSC
T ss_pred             HhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCC--EEEEecc
Confidence            444446899999998542              13445556555544  6887663

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=94.76  E-value=0.019  Score=55.96  Aligned_cols=41  Identities=17%  Similarity=0.228  Sum_probs=36.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~  118 (401)
                      .|.+|.|+     |.||+|.-++..|.+.||+|++++.++++.+.+
T Consensus        20 ~m~~IaVi-----GlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~l   60 (444)
T 3vtf_A           20 HMASLSVL-----GLGYVGVVHAVGFALLGHRVVGYDVNPSIVERL   60 (444)
T ss_dssp             CCCEEEEE-----CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEE-----ccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            46799999     899999999999999999999999988665444

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=94.75  E-value=0.084  Score=49.20  Aligned_cols=88  Identities=22%  Similarity=0.189  Sum_probs=55.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec--CCCCcccCCCCCCCcccchhcCCC---eEEEcCHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV--GDENSDKMKKPPFNRFNEIVSAGG---KTVWGDPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r--~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~D~~~~~~~~~  149 (401)
                      |+|.|+    | .|.+|..++..|.+.||+|++++|  +++..+.+......    ... ++   .+...+.+++.+++.
T Consensus         1 m~I~ii----G-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~-g~~~~~~~~~~~~~~~~~~~   70 (335)
T 1txg_A            1 MIVSIL----G-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREH----PRL-GVKLNGVEIFWPEQLEKCLE   70 (335)
T ss_dssp             CEEEEE----S-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCB----TTT-TBCCCSEEEECGGGHHHHHT
T ss_pred             CEEEEE----C-cCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcC----ccc-CccccceEEecHHhHHHHHh
Confidence            589999    5 599999999999999999999999  66544333221100    000 11   111223335666666


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHh
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKS  176 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~  176 (401)
                      ++  |+||-+....  .+..+++.+..
T Consensus        71 ~~--D~vi~~v~~~--~~~~v~~~i~~   93 (335)
T 1txg_A           71 NA--EVVLLGVSTD--GVLPVMSRILP   93 (335)
T ss_dssp             TC--SEEEECSCGG--GHHHHHHHHTT
T ss_pred             cC--CEEEEcCChH--HHHHHHHHHhc
Confidence            65  9999887643  55666665543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=94.73  E-value=0.043  Score=50.36  Aligned_cols=67  Identities=21%  Similarity=0.317  Sum_probs=46.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      +|+|.|+    | .|.+|..+++.|.+.|++|++.+|++++...+           ...++.. ..|   +.+++.++  
T Consensus         5 ~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g~~~-~~~---~~~~~~~~--   62 (299)
T 1vpd_A            5 TMKVGFI----G-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV-----------IAAGAET-AST---AKAIAEQC--   62 (299)
T ss_dssp             -CEEEEE----C-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTCEE-CSS---HHHHHHHC--
T ss_pred             cceEEEE----C-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-----------HHCCCee-cCC---HHHHHhCC--
Confidence            4799999    6 79999999999999999999999887544321           1123332 123   33445544  


Q ss_pred             cEEEeCCCC
Q 015746          154 DVVLDNNGK  162 (401)
Q Consensus       154 d~Vv~~a~~  162 (401)
                      |+||.+...
T Consensus        63 D~vi~~v~~   71 (299)
T 1vpd_A           63 DVIITMLPN   71 (299)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEEECCC
Confidence            999988753

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=94.70  E-value=0.047  Score=51.52  Aligned_cols=97  Identities=16%  Similarity=0.199  Sum_probs=57.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .|.||-|+    ||||++|+.+++.|.++.+ ++..+.-......++..    .+..+. ..+.+...|.+++   +.++
T Consensus        12 ~~~~V~Iv----GAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~----~~p~~~-~~l~~~~~~~~~~---~~~~   79 (351)
T 1vkn_A           12 HMIRAGII----GATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEE----IFPSTL-ENSILSEFDPEKV---SKNC   79 (351)
T ss_dssp             CCEEEEEE----STTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHH----HCGGGC-CCCBCBCCCHHHH---HHHC
T ss_pred             ceeEEEEE----CCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHH----hChhhc-cCceEEeCCHHHh---hcCC
Confidence            36799999    9999999999999998854 66665532222111110    011111 2333333344443   3444


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                        |+||.+.+.  .....++..+  .|+ ++|=.|+.
T Consensus        80 --Dvvf~alp~--~~s~~~~~~~--~g~-~VIDlSsd  109 (351)
T 1vkn_A           80 --DVLFTALPA--GASYDLVREL--KGV-KIIDLGAD  109 (351)
T ss_dssp             --SEEEECCST--THHHHHHTTC--CSC-EEEESSST
T ss_pred             --CEEEECCCc--HHHHHHHHHh--CCC-EEEECChh
Confidence              999998874  3344455544  565 57777764

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=94.69  E-value=0.028  Score=52.29  Aligned_cols=34  Identities=15%  Similarity=0.201  Sum_probs=30.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVG  111 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~  111 (401)
                      .+|+|.|+     |.|.+|..+++.|++.|| +|++.+|+
T Consensus        23 ~~~~I~iI-----G~G~mG~~~A~~L~~~G~~~V~~~dr~   57 (312)
T 3qsg_A           23 NAMKLGFI-----GFGEAASAIASGLRQAGAIDMAAYDAA   57 (312)
T ss_dssp             --CEEEEE-----CCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred             CCCEEEEE-----CccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence            46899999     579999999999999999 99999997

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=94.68  E-value=0.096  Score=49.78  Aligned_cols=95  Identities=11%  Similarity=0.156  Sum_probs=59.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-----C-HhhH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-----D-PAEV  144 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-----D-~~~~  144 (401)
                      .+.+|||+    |+ |-||...++.+...|. +|+++++++++.+.+           ...+.+.+. .     | .+.+
T Consensus       191 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~vi~~~~~~~~~~~~i  254 (373)
T 1p0f_A          191 PGSTCAVF----GL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-----------IELGATECLNPKDYDKPIYEVI  254 (373)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-----------HHcCCcEEEecccccchHHHHH
Confidence            45799999    85 9999999999888898 799998877654322           112333221 1     1 1223


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEecc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISS  187 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~SS  187 (401)
                      .++..+ ++|+||++.|. -......++.++.. |  ++|.++.
T Consensus       255 ~~~t~g-g~Dvvid~~g~-~~~~~~~~~~l~~~~G--~iv~~G~  294 (373)
T 1p0f_A          255 CEKTNG-GVDYAVECAGR-IETMMNALQSTYCGSG--VTVVLGL  294 (373)
T ss_dssp             HHHTTS-CBSEEEECSCC-HHHHHHHHHTBCTTTC--EEEECCC
T ss_pred             HHHhCC-CCCEEEECCCC-HHHHHHHHHHHhcCCC--EEEEEcc
Confidence            333334 68999999874 12334445555444 4  7887663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	401
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-23
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-21
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-20
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-19
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-19
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-18
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-17
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-16
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	5e-16
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	5e-16
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-16
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-13
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	9e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-12
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-11
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	6e-11
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-10
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-10
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-09
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-07
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-07
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	5e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.002

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 1e-23
 Identities = 59/326 (18%), Positives = 109/326 (33%), Gaps = 44/326 (13%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNEI 129
           +K++LI    +GG   +G +L  +L+  GHEVT++    T    N +         F  I
Sbjct: 1   RKRILI----TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG--HENFELI 54

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFI 185
                + ++ +  ++ ++    +    + N  K    N      +   AK  G +  L  
Sbjct: 55  NHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR-LLLA 113

Query: 186 SSAGIYKPADEPPHVEGDVVKPD-------------AGHVQVEKYISENFSNWASFRPQY 232
           S++ +Y   +  P  E      +                     Y+ +        R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 233 MIGSGNNKDCEEW---FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
             G   + +       F  + ++  P+ + GSG Q     +V DL + L   + +     
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--- 230

Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 349
           S+  NL +    T+   A+L     G   EI                         + + 
Sbjct: 231 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA----------QDDPQKRKPDIKK 280

Query: 350 AKDILGWRSTTNLPEDLKERFEEYVK 375
           AK +LGW     L E L +    + K
Sbjct: 281 AKLMLGWEPVVPLEEGLNKAIHYFRK 306

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 92.2 bits (228), Expect = 1e-21
 Identities = 47/327 (14%), Positives = 96/327 (29%), Gaps = 42/327 (12%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGD--------ENSDKMKKPPFN 124
           ++L+    +GG   IG +  ++LL   +       + V D         N   +   P  
Sbjct: 2   RLLV----TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRL 57

Query: 125 RFNE--IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKSS 177
           RF    I  AG         +        +               N+   + +   A  +
Sbjct: 58  RFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA 117

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
           GV + + +S+  +Y   D     E   ++P+           +    Y      +    R
Sbjct: 118 GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITR 177

Query: 230 PQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                G   + +     F   ++    +P+ G G       H  D    + L +    A 
Sbjct: 178 CCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA- 236

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
              I+++     +T   +  +   + G     V       G D         + +  +  
Sbjct: 237 -GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHD---------LRYSLDGG 286

Query: 349 AAKDILGWRSTTNLPEDLKERFEEYVK 375
             +  LG+R   +  + L      Y +
Sbjct: 287 KIERELGYRPQVSFADGLARTVRWYRE 313

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 87.9 bits (216), Expect = 4e-20
 Identities = 44/313 (14%), Positives = 94/313 (30%), Gaps = 22/313 (7%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           + ++L++    G    IG ++AK  L  GH   ++      S   +K          ++G
Sbjct: 3   RSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA--QLLESFKASG 56

Query: 134 GKTVWGDPAEVGNVVGGV--TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
              V G   +  ++V  V     V+       +++   +    K  G  +  F S  G  
Sbjct: 57  ANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGND 116

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
                       V +      +V + I      +         G                
Sbjct: 117 VDNVHAVEPAKSVFEV---KAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLA--QAGLTAP 171

Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
            +  V I G G          D+ +    AV++P   +  ++  +    ++L+ +  L  
Sbjct: 172 PRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE 231

Query: 312 QAAGLPVEIVHYDP-------KAAGIDAKKAFPFRNMHFYAEPRAAKDI--LGWRSTTNL 362
           +     +E  +                A  +    +  F    +   +I   G  ++   
Sbjct: 232 KKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLY 291

Query: 363 PEDLKERFEEYVK 375
           P+      +EY+ 
Sbjct: 292 PDVKYTTVDEYLS 304

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 86.8 bits (213), Expect = 1e-19
 Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 19/315 (6%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE---I 129
           +K +VLIV    GG   IG  +    +  GH   ++   +  S+  K      F +    
Sbjct: 2   KKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK 57

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
           +            +    V  V   +       ++     + +  K +G  +    S  G
Sbjct: 58  LIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFG 117

Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
           +    D   H             +V + I      +         G        +     
Sbjct: 118 MDP--DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSL-AQLDGHM 174

Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
           +  +  V I G G          D+ +    ++++P+  +  ++       ++   + ++
Sbjct: 175 MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQI 234

Query: 310 CAQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
             + +   ++ ++   +    D K   +  + +  +      +  L          +  +
Sbjct: 235 WERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATK 294

Query: 369 RF--------EEYVK 375
            +        + Y++
Sbjct: 295 LYPEVKYVTMDSYLE 309

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 84.9 bits (209), Expect = 8e-19
 Identities = 45/358 (12%), Positives = 99/358 (27%), Gaps = 63/358 (17%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           K  LI    +G     G YLA+ LL  G+EV  +     + +  +     +     +   
Sbjct: 2   KVALI----TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKF 57

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAK 175
              +GD    + +  ++  V  D V +                    +      + +  +
Sbjct: 58  HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR 117

Query: 176 SSGVKQ---FLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSN 224
             G+++   F   S++ +Y    E P  E     P           +     Y       
Sbjct: 118 FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 177

Query: 225 WASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
             +             +   +       +           G+     +  H +D   M  
Sbjct: 178 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 237

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG---------- 329
           + ++  +      F + +    ++    ++ A   G+ +       +  G          
Sbjct: 238 MMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDA 294

Query: 330 -----------IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
                      +D +   P        +P  A + LGW+    L E + E     ++ 
Sbjct: 295 PGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 82.7 bits (203), Expect = 4e-18
 Identities = 50/333 (15%), Positives = 105/333 (31%), Gaps = 39/333 (11%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMK----KPPFN 124
           + K  LI    +G    IG  L + LL    +V  +    T    N D+++    +  ++
Sbjct: 15  QPKVWLI----TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70

Query: 125 RFNEI-------VSAGGKTVWGDPAEVGNVVGGVTFDVV--LDNNGKNLDAVRPVADWAK 175
            F  I                 D       +G V   +   + +N  N+D    +   A+
Sbjct: 71  NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130

Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWAS 227
            + V+ F + +S+  Y      P VE  + KP            +  + +      +   
Sbjct: 131 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 190

Query: 228 FRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
            R   + G   + +         +   +++   V I G G    +  ++ +      LA 
Sbjct: 191 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 250

Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 342
                A + ++N+      +L+ +               H +P       +        H
Sbjct: 251 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV-----YRDFREGDVRH 305

Query: 343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
             A+   A  +LG+    ++   +      Y+ 
Sbjct: 306 SLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 79.9 bits (196), Expect = 2e-17
 Identities = 51/330 (15%), Positives = 104/330 (31%), Gaps = 46/330 (13%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE----NSDKMKK-PPFNRFNE 128
           K++V I     G   ++G  + ++L   G    ++   DE    +S  +       R ++
Sbjct: 2   KQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQ 57

Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
           +  A  K                      D   +N+     +   A  + V + LF+ S+
Sbjct: 58  VYLAAAKVGGIVA----------NNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 107

Query: 189 GIY-----KPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQYMIG 235
            IY     +P  E   ++G +   +        AG    E Y  +   ++ S  P  + G
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 236 SGNNKDCEE----------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
             +N               +      +   V + GSG       HV D+++     +E  
Sbjct: 168 PHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227

Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
                     +        G+     + A    ++V Y  +   +    + P        
Sbjct: 228 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR---VVFDASKPDGTPRKLL 284

Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
           +       LGW    +L   L   ++ +++
Sbjct: 285 DVTRLHQ-LGWYHEISLEAGLASTYQWFLE 313

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 78.6 bits (193), Expect = 1e-16
 Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 59/347 (17%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+LI    +GG   IG  + + ++ +  +  +       +  ++    +  +   S    
Sbjct: 2   KILI----TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE----SLSDISESNRYN 53

Query: 136 TVWGD---PAEVGNVVGGVTFDVV------------LDNNGK----NLDAVRPVADWAKS 176
               D    AE+  +      D V            +         N+     + + A+ 
Sbjct: 54  FEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARK 113

Query: 177 SGVK---------QFLFISSAGIYKPADEPPHVEGDVVKPD------------------A 209
                        +F  IS+  +Y     P  VE  V  P                   +
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKAS 173

Query: 210 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNI 268
               V  +                 G  +  +          +  +P+PI G G Q  + 
Sbjct: 174 SDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDW 233

Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
            +V D +  L + V   +A     +N+          +           V       +  
Sbjct: 234 LYVEDHARALHMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQI 291

Query: 329 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
              A +  P  +  +  +       LGW+        +++  E Y+ 
Sbjct: 292 TYVADR--PGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 76.5 bits (187), Expect = 5e-16
 Identities = 44/329 (13%), Positives = 90/329 (27%), Gaps = 42/329 (12%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------ 126
           E  K+ I    +G    I  ++A+ L   GH V       +N    +    + F      
Sbjct: 14  ENLKISI----TGAGGFIASHIARRLKHEGHYVIASDWK-KNEHMTEDMFCDEFHLVDLR 68

Query: 127 --NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                +                   G            N      + + A+ +G+K+F +
Sbjct: 69  VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFY 128

Query: 185 ISSAG-------IYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
            SSA        +          +    +P         A     + Y  +        R
Sbjct: 129 ASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 188

Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP---E 286
              + G                 ++          + +    R  + +           +
Sbjct: 189 FHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248

Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 346
           +      N+ SD  V+++ MA++        + I H+ P   G+  +           ++
Sbjct: 249 SDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI-HHIPGPEGVRGR----------NSD 297

Query: 347 PRAAKDILGWRSTTNLPEDLKERFEEYVK 375
               K+ LGW     L E L+  +    +
Sbjct: 298 NNLIKEKLGWAPNMRLKEGLRITYFWIKE 326

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (186), Expect = 5e-16
 Identities = 43/352 (12%), Positives = 91/352 (25%), Gaps = 53/352 (15%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP------------- 121
           + V ++   +G     G YLA+ LL  G+EV  +     + +  +               
Sbjct: 1   RNVALI---TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 57

Query: 122 ----------PFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
                            I       ++   A+    +     +   D +G     +    
Sbjct: 58  MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 117

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFS 223
                    +F   S++ +Y    E P  E     P           +  V  +      
Sbjct: 118 KTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 177

Query: 224 NWASFRP-----QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
              +             +   +          + +      G+     +  H +D    +
Sbjct: 178 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 237

Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG--------- 329
            L ++N E      F + +    ++    +      G  +     +    G         
Sbjct: 238 WLMLQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVH 294

Query: 330 --IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 379
             +D K   P        +   AK  L W+      E ++E     V++ R 
Sbjct: 295 VTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRT 346

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 75.8 bits (185), Expect = 7e-16
 Identities = 65/348 (18%), Positives = 126/348 (36%), Gaps = 66/348 (18%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VL+    +GG   IG +   +LL +GH+V I+    +N    K+        +      
Sbjct: 2   RVLV----TGGSGYIGSHTCVQLLQNGHDVIIL----DNLCNSKRSVLPVIERLGGKHPT 53

Query: 136 TVWGD---PAEVGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKS 176
            V GD    A +  ++     D V                L+    N++    +    ++
Sbjct: 54  FVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRA 113

Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVV----------KPDAGHVQVEKYISENFSNWA 226
           + VK F+F SSA +Y    + P+VE              K     +  +   ++   + A
Sbjct: 114 ANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173

Query: 227 SFRPQYMIG---SGNNKDCEEWFFDRIV---------RKRPVPIPGSGMQFTNIAHVRDL 274
             R    +G   SG+  +  +   + ++         R+  + I G+     +   VRD 
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233

Query: 275 SSMLTLAVENP-------EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
             ++ LA  +             +I+NL +    ++  +    ++A G PV   H+ P+ 
Sbjct: 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNY-HFAPRR 292

Query: 328 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
            G             ++A+   A   L WR T  L E  ++ +    +
Sbjct: 293 EGDL---------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSR 331

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 67.3 bits (163), Expect = 4e-13
 Identities = 39/329 (11%), Positives = 92/329 (27%), Gaps = 41/329 (12%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-----TVGDENSDKMKKPPFNRFNEI 129
           +  L+    +G     G YLAK LL  G+ V  +     +       ++      ++ + 
Sbjct: 1   RSALV----TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDG 56

Query: 130 ---------VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
                     +                  G +++  +     +   V  + +  +    +
Sbjct: 57  DMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE 116

Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQ 231
              + +S        +    + +               GH     Y      + +S    
Sbjct: 117 TRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176

Query: 232 YMIGSGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
                    +         V      K+     G+     +     D    + L ++  +
Sbjct: 177 NHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK 236

Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 346
              ++ + + +    T+  M ++  +  GL             ID     P         
Sbjct: 237 ---ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLK------IDPAFFRPAEVDVLLGN 287

Query: 347 PRAAKDILGWRSTTNLPEDLKERFEEYVK 375
           P  A+ +LGW+  T+L E ++   E  ++
Sbjct: 288 PAKAQRVLGWKPRTSLDELIRMMVEADLR 316

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 66.6 bits (161), Expect = 9e-13
 Identities = 34/254 (13%), Positives = 66/254 (25%), Gaps = 17/254 (6%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
           +KK + +V    G     G  L +     GH V    V        ++        +   
Sbjct: 2   QKKTIAVV----GATGRQGASLIRVAAAVGHHVRAQ-VHSLKGLIAEELQAIPNVTLFQG 56

Query: 133 GGKTVWGDPAEVGNVVGG--VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
               +  +   +  +  G  + F       G  +   + +AD AK +G  Q    SS   
Sbjct: 57  ---PLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 113

Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDR 249
           +      P      V   A    VE Y+ +            Y     +           
Sbjct: 114 HSLYGPWPA-----VPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELM 168

Query: 250 IVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
                    P         +    D+   L    ++     +     ++   ++   +  
Sbjct: 169 PDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCA 228

Query: 309 LCAQAAGLPVEIVH 322
             ++A    V  V 
Sbjct: 229 AFSRALNRRVTYVQ 242

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (154), Expect = 2e-12
 Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 26/216 (12%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           KK+ I     G     G     + + +G+EVT++     +S ++        + +V    
Sbjct: 4   KKIAIF----GATGQTGLTTLAQAVQAGYEVTVL---VRDSSRLPSEGPRPAHVVVGDVL 56

Query: 135 KTVWGDPAEVG--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
           +    D    G   V+  +     L       +  R +    K+ GV + +  +SA +  
Sbjct: 57  QAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLL- 115

Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
              +P  V   +      H+++ K + E+   + +  P                 D+   
Sbjct: 116 --WDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQ-PL 159

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                +   G   + +    DL   +   +   E  
Sbjct: 160 TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD 195

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.8 bits (151), Expect = 2e-11
 Identities = 55/357 (15%), Positives = 110/357 (30%), Gaps = 74/357 (20%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           K VL+    +GG   IG +   EL+ +G++  +     +N          R   +     
Sbjct: 2   KIVLV----TGGAGYIGSHTVVELIENGYDCVVA----DNLSNSTYDSVARLEVLTKHHI 53

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVL----------------DNNGKNLDAVRPVADWAK 175
                D      +  V      D V+                     N+     + +  +
Sbjct: 54  PFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 113

Query: 176 SSGVKQFLFISSAGIY----KPADEPPHVEGDVVKP------------------DAGHVQ 213
              V +F+F SSA +Y    +  +  P  E   + P                       +
Sbjct: 114 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 173

Query: 214 VEKYISENFSNWASFRPQYMIGSGN----NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
             K+    + N     P  +IG       N          + R+  + I G      +  
Sbjct: 174 SWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 233

Query: 270 HVRDLSSMLTLAVENPEAAS-----------SNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
            +RD   ++ LA  +  A                +NL S +  T+  +     +A+G+ +
Sbjct: 234 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL 293

Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
                  +A  +          ++  A+P  AK  L W++   + +  K+ ++   +
Sbjct: 294 PYKVTGRRAGDV----------LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 340

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 60.9 bits (146), Expect = 6e-11
 Identities = 41/345 (11%), Positives = 84/345 (24%), Gaps = 50/345 (14%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-----------KMKKPP 122
           +K  LI    +G     G YL + LLG G+EV  +     N +                 
Sbjct: 1   RKIALI----TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKA 56

Query: 123 FNRF-----------NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
             +               +         + A   +V           +           A
Sbjct: 57  LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 116

Query: 172 D--WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISEN 221
                  SG     + + +     +  PP  E     P         A H     Y    
Sbjct: 117 VRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 176

Query: 222 FSNWASFRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
                +            ++              V  +     G+     +     D   
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 336
            + L ++  +     +           +    +          +         ID +   
Sbjct: 237 AMWLMLQQEKPDDYVVAT---------EEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFR 287

Query: 337 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 381
           P    +   +   AK++LGW+      + +K   +E +++ + +K
Sbjct: 288 PAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREK 332

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (144), Expect = 1e-10
 Identities = 62/354 (17%), Positives = 111/354 (31%), Gaps = 68/354 (19%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIVS 131
            +KVL+    +GG   IG +   ELL +G+   ++             P +  R  E+  
Sbjct: 2   AEKVLV----TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG 57

Query: 132 AGGKTVWGD---------------------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPV 170
              +    D                      A +  V  G +    LD    NL     +
Sbjct: 58  RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQL 115

Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-------- 222
            +  K+ GVK  +F SSA +Y      P  E              K+  E          
Sbjct: 116 LEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD 175

Query: 223 --SNWASFRPQYMIG---SGNNKDCEEWFFDRIV---------RKRPVPIPGSGMQFTNI 268
              N    R     G   SG   +  +   + ++         R+  + + G+     + 
Sbjct: 176 KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235

Query: 269 AHVRDLSSMLTLAVENP-------EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
             VRD   ++ LA  +        E     I+NL +    ++  M +   +A+G  +   
Sbjct: 236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK 295

Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
               +   +             YA P  A++ LGW +   L    ++ +    +
Sbjct: 296 VVARREGDV----------AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 59.4 bits (142), Expect = 2e-10
 Identities = 47/356 (13%), Positives = 105/356 (29%), Gaps = 74/356 (20%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+LI    +GG   +G  LA   L  G ++ +    D  S K      +  + +     +
Sbjct: 2   KLLI----TGGCGFLGSNLASFALSQGIDLIVF---DNLSRKGATDNLHWLSSL--GNFE 52

Query: 136 TVWGD---PAEVGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKS 176
            V GD     +V  ++     D                    +   N+     + +  + 
Sbjct: 53  FVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQ 112

Query: 177 SGVKQ-FLFISSAGIYKPADEPPHVEGDVVKPD------------------------AGH 211
                  ++ S+  +Y   ++  + E +                             A  
Sbjct: 113 YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 172

Query: 212 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---------KRPVPIPGSG 262
             +  Y      N   FR   M G       ++ +     +          +P  I G+G
Sbjct: 173 QYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG 232

Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSN--IFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
            Q  ++ H  D+ S+   A+ N      N          +++L  + KL      + +  
Sbjct: 233 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRF 292

Query: 321 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
            +   + +              F A+ +   + + W    +  + +++ ++    I
Sbjct: 293 TNLPVRESDQR----------VFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI 338

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 56.5 bits (135), Expect = 2e-09
 Identities = 41/336 (12%), Positives = 90/336 (26%), Gaps = 51/336 (15%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-------ENSDKMKKPPFNRFN 127
           K +++    +GG   IG      +  +  +V +  +          N + +         
Sbjct: 3   KNIIV----TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVV 58

Query: 128 ------EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
                 E+V                     + +        N      + + A+   ++ 
Sbjct: 59  GDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF 118

Query: 182 FLFISSAGIY--KPADEP----------PHVEGDVVKPD--------AGHVQVEKYISEN 221
              +S+  +Y   P  E                    P         A  + V+ ++   
Sbjct: 119 H-HVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177

Query: 222 FSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
                        G   + +         I+      + G G    +  H  D S+ +  
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237

Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
            +          + + +D       + +L  +  G P +   +    AG D         
Sbjct: 238 ILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHD--------- 286

Query: 341 MHFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVK 375
           + +  +    +D LGW    T+  E L+E  + Y  
Sbjct: 287 LRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTD 322

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 50.6 bits (119), Expect = 1e-07
 Identities = 46/304 (15%), Positives = 86/304 (28%), Gaps = 31/304 (10%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSA 132
           K+LI     G +  +G  + K+L G   EV    V D    N   + K  FN     V  
Sbjct: 3   KILIT----GANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNK-FFNEKKPNV-- 55

Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
               V    A          +D+    N      +   A    +  V+        G  K
Sbjct: 56  ----VINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAK 111

Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
                              ++ E ++      +   R  ++ G GNN         +   
Sbjct: 112 EPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHD 171

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
           +  V     G   + +   R       + ++  +  +   F+       +    A    +
Sbjct: 172 ELKVVHDQVGTPTSTVDLAR-------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFR 224

Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 372
             G+ V++     +     AK     R  +        +   G         + KE  +E
Sbjct: 225 LTGIDVKVTPCTTEEFPRPAK-----RPKYSVLRNYMLELTTGDI-----TREWKESLKE 274

Query: 373 YVKI 376
           Y+ +
Sbjct: 275 YIDL 278

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 50.7 bits (119), Expect = 1e-07
 Identities = 46/339 (13%), Positives = 93/339 (27%), Gaps = 43/339 (12%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPP-----------F 123
           +VLI     G +  IG +L + LL   H EV  + +G +   +    P            
Sbjct: 2   RVLI----LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIH 57

Query: 124 NRFNEIVSAG------------GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
           + + E                       +P  V  +       ++          + P  
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 117

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
                    ++     + +       P     V K     V       E           
Sbjct: 118 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 177

Query: 232 YMIGSGNNKDCEE--------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
           +M    +N +                +V   P+ +   G Q      +RD    L   +E
Sbjct: 178 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE 237

Query: 284 NPE-AASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN- 340
           N        I N+ +     +++ + ++   +        H+ P A     + +  +   
Sbjct: 238 NAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG 297

Query: 341 ----MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
                H     R A   L W    ++ E + E  + +++
Sbjct: 298 YQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLR 336

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 50.6 bits (119), Expect = 2e-07
 Identities = 27/155 (17%), Positives = 58/155 (37%), Gaps = 23/155 (14%)

Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVENPEA 287
           + S    D      +     + +PI G+      G    +  HV DL+S   LA++  E 
Sbjct: 232 VMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEK 291

Query: 288 -------ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
                     ++FNL + R  ++  + ++  +  G P+ +     +              
Sbjct: 292 LGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDP---------- 341

Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
            +  A    A+++LGW+   +  E + E   ++ +
Sbjct: 342 AYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQR 376

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 50.2 bits (118), Expect = 2e-07
 Identities = 39/344 (11%), Positives = 86/344 (25%), Gaps = 66/344 (19%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK----PPFNRFNE 128
           E   VL+    +G +  +  ++ ++LL  G++V            ++K        RF  
Sbjct: 10  EGSLVLV----TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFET 65

Query: 129 IVSA--------GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
            V                         V   +              +  +   A +  VK
Sbjct: 66  AVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVK 125

Query: 181 QFLFISSA---GIYKPADEPPHVEGDVVKPD---------------------AGHVQVEK 216
           +F+  SS     I KP  E  +++      +                     A   + E 
Sbjct: 126 RFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAEL 185

Query: 217 YI------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---KRPVPIPGSGMQFTN 267
                   ++      +  P Y IG+  + + +       +       V    + M    
Sbjct: 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY 245

Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYD 324
                D+  +    +  P+          +      + +     +       P +     
Sbjct: 246 YVSAVDIGLLHLGCLVLPQI--ERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQG 303

Query: 325 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
              +  D   +                  LG     ++ E +K+
Sbjct: 304 QDLSKFDTAPS------------LEILKSLGRPGWRSIEESIKD 335

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.1 bits (115), Expect = 2e-07
 Identities = 23/262 (8%), Positives = 49/262 (18%), Gaps = 30/262 (11%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
           A    VL+     G     G  + K+L     +               K       ++  
Sbjct: 1   ANLPTVLVT----GASGRTGQIVYKKLKEGSDKF---VAKGLVRSAQGKEKIGGEADVFI 53

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
                          +   V     +       D  +           +    +   G  
Sbjct: 54  GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 113

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
              D                V      + +           ++     +           
Sbjct: 114 NQIDAAKVAG----VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYT 169

Query: 252 RKRPVPIPGSGMQFTNIA---------------HVRDLSSMLTLAVENPEAASSNIFNLV 296
             R   +         +                   D++ +   A+   EA  +  F+L 
Sbjct: 170 IIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAK-NKAFDLG 228

Query: 297 SD---RAVTLDGMAKLCAQAAG 315
           S     +        L +Q   
Sbjct: 229 SKPEGTSTPTKDFKALFSQVTS 250

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (105), Expect = 5e-06
 Identities = 30/221 (13%), Positives = 54/221 (24%), Gaps = 12/221 (5%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
           + K V I+    G     G  L KE+L  G    +  +G             +       
Sbjct: 13  QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIG--RRKLTFDEEAYKNVNQEVV 66

Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
             + +    +       G                VR   D+   S               
Sbjct: 67  DFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLL 126

Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
            +         +     G V+  K     F  ++ FRP  ++         EW   +   
Sbjct: 127 SSKGADKSSNFLYLQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFG 185

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                +P S     ++  V  +   +   V  P      + 
Sbjct: 186 ----SLPDSWASGHSV-PVVTVVRAMLNNVVRPRDKQMELL 221

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 26/230 (11%), Positives = 55/230 (23%), Gaps = 25/230 (10%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
            K+VL+     G   + G +L   +L       ++           +        + +  
Sbjct: 2   PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPA--------RKALAEHPRLDNPV 49

Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
           G      P   G++               + +A R V      +  K+ L + +      
Sbjct: 50  GPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVV 109

Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
           +      +  +          +    + +      RP  + G        E     I   
Sbjct: 110 SALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIA-- 167

Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-----SSNIFNLVSD 298
                     ++  I    DL+  L               S  +  L   
Sbjct: 168 -----RILPGKYHGI-EACDLARALWRLALEEGKGVRFVESDELRKLGKG 211

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.6 bits (85), Expect = 0.002
 Identities = 22/165 (13%), Positives = 49/165 (29%), Gaps = 13/165 (7%)

Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
             + +         +            F  +     P+ + G G Q      +RD    +
Sbjct: 216 KTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 275

Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA---GLPVEIVHYDPKAAGIDAKKA 335
            +A+ NP  A             +++ +A L  +A    GL V+ +         +    
Sbjct: 276 EIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEH-- 333

Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDK 380
                 ++ A+     + LG        + L +    +    +D+
Sbjct: 334 ------YYNAKHTKLME-LGLEPHYLS-DSLLDSLLNFAVQFKDR 370

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	401
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.97
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.97
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.91
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.88
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.61
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.6
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.58
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.57
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.57
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.57
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.55
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.55
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.55
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.54
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.54
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.54
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.54
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.52
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.52
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.52
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.52
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.51
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.5
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.5
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.5
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.5
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.49
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.49
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.48
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.47
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.47
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.45
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.44
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.44
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.44
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.43
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.43
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.43
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.41
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.41
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.4
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.39
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.37
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.37
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.36
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.35
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.31
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.3
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.29
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.28
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.28
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.27
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.24
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.24
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.24
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.24
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.16
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.15
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.15
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.12
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.11
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.11
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.04
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.03
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.01
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.01
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.93
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.87
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.79
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.45
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.11
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.88
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.74
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.67
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.38
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.38
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.37
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.36
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.33
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.29
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.27
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.24
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.19
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.17
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.16
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.01
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.0
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.96
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.96
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.94
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.86
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.85
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.84
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.74
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.72
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.71
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.71
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.71
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.7
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.69
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.61
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.59
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.44
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.43
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.4
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.39
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.37
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.33
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.31
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.3
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.14
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.1
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.09
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.09
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.09
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.04
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.0
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.87
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.78
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.75
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.71
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.68
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.67
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.65
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.59
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.47
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.46
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.43
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.42
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.36
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.34
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.3
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.21
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.17
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.98
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.96
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	94.79
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	94.78
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.77
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.76
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	94.72
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	94.59
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.56
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.55
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.55
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	94.48
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.4
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.39
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.32
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.24
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.17
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.05
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.96
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	93.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.89
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.89
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	93.88
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	93.84
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.83
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.75
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.55
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.52
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.5
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.48
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.26
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.23
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.22
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	93.11
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	93.08
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	93.0
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	92.95
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.88
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	92.86
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.85
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	92.83
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	92.71
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.58
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	92.57
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.56
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.26
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.17
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.07
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.95
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.88
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.77
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.77
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.68
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	91.6
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.52
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.46
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.44
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.35
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.31
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.2
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.18
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.18
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	90.98
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.93
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	90.85
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.49
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	90.45
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.21
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.18
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.94
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.85
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	89.21
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	89.05
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.96
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.92
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	88.51
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.37
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.29
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.2
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.53
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.35
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.23
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	87.04
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	86.77
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	86.63
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	86.59
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	86.56
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	86.48
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	86.47
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	85.71
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	85.62
d1jzta_	243	Hypothetical protein YNL200c (YNU0_YEAST) {Baker's	84.82
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	84.52
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	84.32
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.15
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	83.85
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	83.36
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	83.3
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	83.21
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	83.12
d1zgza1	120	TorCAD operon transcriptional regulator TorD, N-te	83.08
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.04
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.85
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	82.78
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	82.7
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	82.6
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	82.08
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	81.98
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.75
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	81.29
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	81.28
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	81.21
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	81.15
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	80.62
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	80.39
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	80.38
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.27
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	80.27
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.21
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	80.15

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.2e-42  Score=327.99  Aligned_cols=279  Identities=15%  Similarity=0.224  Sum_probs=226.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEE------EecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI------MTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEV  144 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~------~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~  144 (401)
                      ||||||    |||||||++++++|+++||+|.+      +++........      .... ....+++++.+|   ....
T Consensus         1 MkIlIt----G~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~~   70 (322)
T d1r6da_           1 MRLLVT----GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA------NLAPVDADPRLRFVHGDIRDAGLL   70 (322)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG------GGGGGTTCTTEEEEECCTTCHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh------HhhhhhcCCCeEEEEeccccchhh
Confidence            789999    99999999999999999986544      33322111110      1111 123478888888   3444


Q ss_pred             HHhhcCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~  208 (401)
                      ......  +|.|+|+|+.                |+.++.+++++|++.++++|||+||..+|+.....+++|+++..|.
T Consensus        71 ~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~  148 (322)
T d1r6da_          71 ARELRG--VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN  148 (322)
T ss_dssp             HHHTTT--CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC
T ss_pred             hccccc--cceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCC
Confidence            444443  6999999974                6889999999999999999999999999999888899999988875


Q ss_pred             CChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          209 AGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       209 ~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                       +.|+..|...|         ++++++++||++||||++.. .+++.++.++..++++.++++|++.++|+|++|+|+++
T Consensus       149 -~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai  227 (322)
T d1r6da_         149 -SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (322)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHH
Confidence             67776665544         38999999999999998654 47888899999999999999999999999999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceE-EecCCCcccccccccCCCccceEeechHHHHHhcCCC
Q 015746          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI-VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  357 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  357 (401)
                      ..+++++..  |++||+++++.+++.|+++.+.+.+|.+... ....+....          .....+|++|+++.|||+
T Consensus       228 ~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lg~~  295 (322)
T d1r6da_         228 ALVLAGGRA--GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGH----------DLRYSLDGGKIERELGYR  295 (322)
T ss_dssp             HHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTC----------CCBCCBCCHHHHHHHCCC
T ss_pred             HHHHhCCCC--CCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCC----------CceeeeCHHHHHHHHCCC
Confidence            999998776  6899999999999999999999999988553 333332211          245678999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhcC
Q 015746          358 STTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       358 p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      |+++++|+|+++++||+++..
T Consensus       296 p~~~~eegI~~~i~w~~~n~~  316 (322)
T d1r6da_         296 PQVSFADGLARTVRWYRENRG  316 (322)
T ss_dssp             CCSCHHHHHHHHHHHHHHCHH
T ss_pred             CCCCHHHHHHHHHHHHHHhHH
Confidence            999999999999999998753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-41  Score=316.96  Aligned_cols=275  Identities=21%  Similarity=0.227  Sum_probs=218.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      +||||||    ||+||||++|+++|+++||+|++++|..........      .......+++...|  .++.++.+  +
T Consensus         1 kKKIlVt----G~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~------~~~~~~~~d~~~~~--~~~~~~~~--~   66 (312)
T d2b69a1           1 RKRILIT----GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENFELINHD--VVEPLYIE--V   66 (312)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG------GGTTCTTEEEEECC--TTSCCCCC--C
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH------HhcCCCceEEEehH--HHHHHHcC--C
Confidence            4799999    999999999999999999999999874432221100      11111234444333  34445444  6


Q ss_pred             cEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC-----CCCCCChH
Q 015746          154 DVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-----VKPDAGHV  212 (401)
Q Consensus       154 d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~-----~~~~~~~~  212 (401)
                      |+|||+|+.                |+.++.+|+++|++.++ +|||+||.+||+.....|..|+..     ..| .+.|
T Consensus        67 d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p-~~~Y  144 (312)
T d2b69a1          67 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP-RACY  144 (312)
T ss_dssp             SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST-THHH
T ss_pred             CEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCC-ccHH
Confidence            999999983                57789999999999997 799999999999877777776542     333 2556


Q ss_pred             HHHHHHHH---------hCCCeEEEecCeeecCCCCC---CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHH
Q 015746          213 QVEKYISE---------NFSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (401)
Q Consensus       213 ~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~  280 (401)
                      +..|.+.|         ++++++++||++||||+...   .+++.++.++..|+++.++|++.+.++|+|++|++++++.
T Consensus       145 ~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~  224 (312)
T d2b69a1         145 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  224 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHH
Confidence            65554443         38999999999999997643   3678889999999999999999999999999999999999


Q ss_pred             HhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCC
Q 015746          281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT  360 (401)
Q Consensus       281 ~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~  360 (401)
                      +++...   +++||+++++.+++.|+++.+++.+|.+.++...+....+          .....+|++|++++|||+|++
T Consensus       225 ~~~~~~---~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lgw~p~~  291 (312)
T d2b69a1         225 LMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD----------PQKRKPDIKKAKLMLGWEPVV  291 (312)
T ss_dssp             HHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTC----------CCCCCBCCHHHHHHHCCCCCS
T ss_pred             HHhhcc---CCceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCC----------CCeeeECHHHHHHHHCCCCCC
Confidence            987664   3789999999999999999999999998877665543322          245678999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhc
Q 015746          361 NLPEDLKERFEEYVKIG  377 (401)
Q Consensus       361 ~l~e~l~~~~~~~~~~~  377 (401)
                      +++|+|+++++||+++.
T Consensus       292 ~l~~~I~~~i~w~~~~~  308 (312)
T d2b69a1         292 PLEEGLNKAIHYFRKEL  308 (312)
T ss_dssp             CHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            99999999999998763

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.1e-41  Score=322.23  Aligned_cols=294  Identities=16%  Similarity=0.173  Sum_probs=217.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |+||||    |||||||++|+++|+++||+|++++|........+.............+++++.+|   .+++.+++.+.
T Consensus         2 K~vLIT----GatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (357)
T d1db3a_           2 KVALIT----GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV   77 (357)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc
Confidence            789999    99999999999999999999999999653321111000011112233467777776   88888999988


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC---EEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK---QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~---~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      +||+|+|+|+.                |+.++.||+++|++.+++   ||||+||..|||.....|++|+++..|. +.|
T Consensus        78 ~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~-~~Y  156 (357)
T d1db3a_          78 QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPY  156 (357)
T ss_dssp             CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC-SHH
T ss_pred             CCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCC-ChH
Confidence            89999999984                688999999999998654   7999999999998888899999988764 677


Q ss_pred             HHHHHHHH---------hCCCeEEEecCeeecCCCCCCcHH----HHHHHHHcCCC-cccCCCCcceeeeeeHHHHHHHH
Q 015746          213 QVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEE----WFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       213 ~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      +..|++.|         ++++++++||+++|||+.......    .++.++..+++ ...+|++++.++|+|++|+++++
T Consensus       157 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~  236 (357)
T d1db3a_         157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ  236 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence            76665555         389999999999999976554332    33444455544 45678999999999999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccc---------------------cccccCC
Q 015746          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI---------------------DAKKAFP  337 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~---------------------~~~~~~~  337 (401)
                      +.++++..   +++||+++++.+|++|+++.+.+.+|....+...+......                     ......|
T Consensus       237 ~~~~~~~~---~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  313 (357)
T d1db3a_         237 WMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRP  313 (357)
T ss_dssp             HHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCC
T ss_pred             HHHHhCCC---CCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCC
Confidence            99998753   48999999999999999999999998665442211110000                     0011122


Q ss_pred             CccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          338 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       338 ~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      .......+|++|++++|||+|+++|+|+|+++++++.+.
T Consensus       314 ~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~~  352 (357)
T d1db3a_         314 AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA  352 (357)
T ss_dssp             CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence            333456679999999999999999999999998876653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-40  Score=316.38  Aligned_cols=286  Identities=21%  Similarity=0.274  Sum_probs=224.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      ||||||    |||||||++|+++|+++||+|++++|-.......    ......+...+++++.+|   .+.+.++++..
T Consensus         1 MKiLIt----G~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   72 (338)
T d1udca_           1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSV----LPVIERLGGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTH----HHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhh----HHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc
Confidence            789999    9999999999999999999999998755332210    012233445689999998   77888888877


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHH
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~e  215 (401)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||..+|+.....+..|..+...+...|+.+
T Consensus        73 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~s  152 (338)
T d1udca_          73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHH
Confidence            78999999983                68899999999999999999999999999887766666666554445667666


Q ss_pred             HHHHHh----------CCCeEEEecCeeecCCCCC-----------CcHHHHHHHHHc-CCCcccCC------CCcceee
Q 015746          216 KYISEN----------FSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIVR-KRPVPIPG------SGMQFTN  267 (401)
Q Consensus       216 k~~~e~----------g~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~  267 (401)
                      |...|.          +++++++|++++||++...           .++..++..+.. +.++.++|      ++.+.++
T Consensus       153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd  232 (338)
T d1udca_         153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD  232 (338)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEEC
T ss_pred             HhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceee
Confidence            654442          7889999999999986431           134444444444 34556655      4788999


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeec
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE  346 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (401)
                      |+|++|++.++..+...... ..+++||+++++.+++.|+++.+.+.+|.+.++...+.....          .....+|
T Consensus       233 ~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d  302 (338)
T d1udca_         233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGD----------LPAYWAD  302 (338)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTC----------CSBCCBC
T ss_pred             EEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCC----------CCEeeEC
Confidence            99999999988877764433 225899999999999999999999999988887766554322          2456689


Q ss_pred             hHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          347 PRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       347 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      ++|++++|||+|.++++|+|+++++||+++.+
T Consensus       303 ~~k~~~~lgwkp~~~l~egi~~ti~w~~~~~~  334 (338)
T d1udca_         303 ASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ  334 (338)
T ss_dssp             CHHHHHHHCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHCCCcCCCHHHHHHHHHHHHHhchh
Confidence            99999999999999999999999999999844

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.4e-40  Score=315.28  Aligned_cols=293  Identities=19%  Similarity=0.189  Sum_probs=229.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~~~~~~  148 (401)
                      .++|+||||    |||||||++|+++|+++||+|++++|......................+++++.+|.   ..+....
T Consensus        14 ~~~k~iLVT----G~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~   89 (341)
T d1sb8a_          14 AQPKVWLIT----GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC   89 (341)
T ss_dssp             HSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----cCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc
Confidence            346899999    999999999999999999999999974432111000000011122335778888883   3344444


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      ..  ++.|+|+++.                |+.++.+++++|++.++++|||+||..+||.....|++|+++..|. +.|
T Consensus        90 ~~--~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y  166 (341)
T d1sb8a_          90 AG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL-SPY  166 (341)
T ss_dssp             TT--CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-SHH
T ss_pred             cc--ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCC-Ccc
Confidence            44  5999998873                6889999999999999999999999999999888899999988875 778


Q ss_pred             HHHHHHHH---------hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          213 QVEKYISE---------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       213 ~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      +..|++.|         .+++++++||+++||++...     .++..++..++.|+++.++|+|.+.++|+|++|++.++
T Consensus       167 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~  246 (341)
T d1sb8a_         167 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN  246 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhh
Confidence            77665555         27999999999999997543     26777889999999999999999999999999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCC
Q 015746          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS  358 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p  358 (401)
                      ..++..+....+++||++.++.+|+.|+++.+.+.++.+..........     ....+....+..+|++|+++.|||+|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~~k~~~~LGw~p  321 (341)
T d1sb8a_         247 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY-----RDFREGDVRHSLADISKAAKLLGYAP  321 (341)
T ss_dssp             HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEE-----ECCCTTCCSBCCBCCHHHHHHTCCCC
T ss_pred             hhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccc-----cCCCCCCcCeeeeCHHHHHHHHCCCc
Confidence            9999887665568999999999999999999999997553221111111     01112223456689999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHh
Q 015746          359 TTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       359 ~~~l~e~l~~~~~~~~~~  376 (401)
                      +++++|+|+++++||++.
T Consensus       322 ~~sl~~gi~~ti~wy~~~  339 (341)
T d1sb8a_         322 KYDVSAGVALAMPWYIMF  339 (341)
T ss_dssp             CCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHh
Confidence            999999999999999975

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.3e-40  Score=320.81  Aligned_cols=291  Identities=15%  Similarity=0.162  Sum_probs=220.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      ||||||    ||+||||++|+++|+++||+|++..+.........     .+.. ....+++++.+|   ++.+..++++
T Consensus         1 MkILIt----G~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   71 (361)
T d1kewa_           1 MKILIT----GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE-----SLSDISESNRYNFEHADICDSAEITRIFEQ   71 (361)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGG-----GGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHH-----HHHhhhhcCCcEEEEccCCCHHHHHHHHHh
Confidence            689999    99999999999999999998655443322111110     1111 122478888888   6788888888


Q ss_pred             CcccEEEeCCCC----------------ChhhHHHHHHHHHhCC---------CCEEEEecccccccCCCCCCC------
Q 015746          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSG---------VKQFLFISSAGIYKPADEPPH------  199 (401)
Q Consensus       151 ~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~g---------v~~~v~~SS~~vy~~~~~~~~------  199 (401)
                      .++|+|||+|+.                |+.++.+++++|++.+         +++|||+||..+||.....+.      
T Consensus        72 ~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          72 YQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             HCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             CCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            789999999984                5778999999998864         348999999999996543322      


Q ss_pred             ----CCCCCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 ----VEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ----~E~~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                          .|..+..| .+.|+.+|.+.|         .+++++++||++||||++.. .+++.++.++..|+++.++|+|++.
T Consensus       152 ~~~~~e~~~~~p-~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~  230 (361)
T d1kewa_         152 LPLFTETTAYAP-SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI  230 (361)
T ss_dssp             CCCBCTTSCCCC-CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCE
T ss_pred             CCCcccCCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeE
Confidence                23333333 366766665544         38999999999999997654 4788899999999999999999999


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEee
Q 015746          266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA  345 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (401)
                      ++|+|++|+|+++..++++...  +++||+++++.++..|+++.+.+.++...+...  ............|.....+.+
T Consensus       231 r~~i~v~D~a~ai~~~~~~~~~--~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  306 (361)
T d1kewa_         231 RDWLYVEDHARALHMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT--SYREQITYVADRPGHDRRYAI  306 (361)
T ss_dssp             EEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS--CGGGGEEEECCCTTCCCBCCB
T ss_pred             EeCEEHHHHHHHHHHHHhcCCC--CCeEEECCCCCcchHHHHhHhhhhccccccccc--CcccceeecCCCCCCCceeee
Confidence            9999999999999999998766  579999999999999999999998754322110  000111111122333366778


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      |++|++++|||+|+++++|+|+++++||+++..+
T Consensus       307 d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n~~~  340 (361)
T d1kewa_         307 DAGKISRELGWKPLETFESGIRKTVEWYLANTQW  340 (361)
T ss_dssp             CCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCHHH
T ss_pred             CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhHHH
Confidence            9999999999999999999999999999988543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.1e-38  Score=305.30  Aligned_cols=272  Identities=18%  Similarity=0.150  Sum_probs=216.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +.||||||    ||+||||++|+++|+++||+|++++|.......         .  .....++..+|   .+.+..+++
T Consensus        14 ~nMKILVT----GgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~---------~--~~~~~~~~~~D~~~~~~~~~~~~   78 (363)
T d2c5aa1          14 ENLKISIT----GAGGFIASHIARRLKHEGHYVIASDWKKNEHMT---------E--DMFCDEFHLVDLRVMENCLKVTE   78 (363)
T ss_dssp             SCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC---------G--GGTCSEEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh---------h--hcccCcEEEeechhHHHHHHHhh
Confidence            46899999    999999999999999999999999876543211         1  11255677777   555666666


Q ss_pred             CCcccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCC-------CCC
Q 015746          150 GVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-------DVV  205 (401)
Q Consensus       150 ~~~~d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~-------~~~  205 (401)
                      +  +|+|||+++.                 |+.++.+++++|++.++++||++||..+|+.....+..|.       .+.
T Consensus        79 ~--~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~  156 (363)
T d2c5aa1          79 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA  156 (363)
T ss_dssp             T--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred             c--CCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcC
Confidence            5  5999999973                 5788999999999999999999999999997654444333       233


Q ss_pred             CCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCC------cHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          206 KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       206 ~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                      .| .+.|+.+|+..|         .|++++++||+++||+++...      ....+........+...+++|.+.++|+|
T Consensus       157 ~p-~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~  235 (363)
T d2c5aa1         157 EP-QDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF  235 (363)
T ss_dssp             CC-SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred             CC-CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEee
Confidence            33 356666555444         389999999999999976432      23334455566777888999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHH
Q 015746          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA  350 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  350 (401)
                      ++|+++++..+++.+.   +++||+++++.+++.|+++.+.+.+|.+.++...+.+...           ....+|++|+
T Consensus       236 v~D~~~~~~~~~~~~~---~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~-----------~~~~~d~ska  301 (363)
T d2c5aa1         236 IDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGV-----------RGRNSDNNLI  301 (363)
T ss_dssp             HHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCC-----------SBCEECCHHH
T ss_pred             hhHHHHHHHHHHhCCC---CCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCCCc-----------cccccCHHHH
Confidence            9999999999998653   4799999999999999999999999998888766544321           4566899999


Q ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          351 KDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       351 ~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      +++|||+|+++++|+|+++++||+++
T Consensus       302 ~~~LGw~p~~sleegi~~ti~w~~~~  327 (363)
T d2c5aa1         302 KEKLGWAPNMRLKEGLRITYFWIKEQ  327 (363)
T ss_dssp             HHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999876

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-37  Score=297.87  Aligned_cols=291  Identities=19%  Similarity=0.208  Sum_probs=223.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCC--CCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+|||||    |||||||++|+++|+++||+|++++|...........  ....+..+...++.++.+|   .+.+.+++
T Consensus         2 ~kKILIT----G~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~   77 (346)
T d1ek6a_           2 AEKVLVT----GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLF   77 (346)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCeEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccc
Confidence            4799999    9999999999999999999999998744322211110  0112334556788999998   67778888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChH
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~  212 (401)
                      .+..+++|+|+|+.                |+.++.+++++|++.++++|+|+||..+|+........+........+.|
T Consensus        78 ~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y  157 (346)
T d1ek6a_          78 KKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY  157 (346)
T ss_dssp             HHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred             cccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChH
Confidence            88888999999984                58899999999999999999999999999987655554444444445677


Q ss_pred             HHHHHHHH----------hCCCeEEEecCeeecCCCCC-----------CcHHHHHHHHHc-CCCcccC------CCCcc
Q 015746          213 QVEKYISE----------NFSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIVR-KRPVPIP------GSGMQ  264 (401)
Q Consensus       213 ~~ek~~~e----------~g~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~~-~~~~~~~------~~~~~  264 (401)
                      +..|+..|          .++.++++|++.+||+....           .+...++..+.. +.++.++      .++.+
T Consensus       158 ~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~  237 (346)
T d1ek6a_         158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG  237 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred             HHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCe
Confidence            76665544          28899999999999985431           134444444443 4444444      35778


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceE
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF  343 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (401)
                      .++|+|++|+|.++..++..... ..+++||+++++.+++.|+++.|.+.+|.+.++...+.+..+          ..+.
T Consensus       238 ~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e----------~~~~  307 (346)
T d1ek6a_         238 VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGD----------VAAC  307 (346)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTC----------CSEE
T ss_pred             eEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCC----------CCEe
Confidence            89999999999999887655433 235899999999999999999999999998888766654332          2566


Q ss_pred             eechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       344 ~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                      .+|++|++++|||+|+++++|+|+++++||+++..
T Consensus       308 ~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~~  342 (346)
T d1ek6a_         308 YANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS  342 (346)
T ss_dssp             CBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             eECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCHh
Confidence            78999999999999999999999999999998754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=9.6e-38  Score=298.79  Aligned_cols=280  Identities=15%  Similarity=0.200  Sum_probs=220.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .||+||||    |||||||++|+++|+++||+|.++.++......    .......+...+++++.+|   .+.+..++.
T Consensus         1 ~~mkILVT----GgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~----~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~   72 (346)
T d1oc2a_           1 QFKNIIVT----GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG----NKANLEAILGDRVELVVGDIADAELVDKLAA   72 (346)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC----CGGGTGGGCSSSEEEEECCTTCHHHHHHHHT
T ss_pred             CcCEEEEe----CCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccc----cHHHHHHhhcCCeEEEEccCCCHHHHHHHHh
Confidence            37999999    999999999999999999988777765322111    0112233445688889997   677888888


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCC------------CCCCCCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA------------DEPPHVE  201 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~------------~~~~~~E  201 (401)
                      ..  +.|+|+|+.                |+.++.|++++|+..+. ++|++||..+||..            ....+.|
T Consensus        73 ~~--~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e  149 (346)
T d1oc2a_          73 KA--DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA  149 (346)
T ss_dssp             TC--SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred             hh--hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCccccccc
Confidence            75  899999883                67899999999999996 79999999999742            1223445


Q ss_pred             CCCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeeeH
Q 015746          202 GDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  271 (401)
                      .++..|. +.|+..|+..|         .+++++++||++||||+... ..+..++..+..+.++.+++++.+.++|+|+
T Consensus       150 ~~~~~p~-s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v  228 (346)
T d1oc2a_         150 ETNYNPS-SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT  228 (346)
T ss_dssp             TSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred             CCCCCCC-CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccch
Confidence            5555544 55665554433         48999999999999997643 4666777888889999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCce-EEecCCCcccccccccCCCccceEeechHHH
Q 015746          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA  350 (401)
Q Consensus       272 ~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  350 (401)
                      +|+|++++.+++++..  +..||+++++..++.|+++.+.+.++.+.. +...+.+...          ...+.+|++|+
T Consensus       229 ~D~a~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~  296 (346)
T d1oc2a_         229 NDHSTGVWAILTKGRM--GETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGH----------DLRYAIDASKL  296 (346)
T ss_dssp             HHHHHHHHHHHHHCCT--TCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTC----------CCBCCBCCHHH
T ss_pred             hhHHHHHHHHHhhccc--CccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCC----------CceeeeCHHHH
Confidence            9999999999988777  579999999999999999999999987533 3333332211          24566899999


Q ss_pred             HHhcCCCCCC-CHHHHHHHHHHHHHHh
Q 015746          351 KDILGWRSTT-NLPEDLKERFEEYVKI  376 (401)
Q Consensus       351 ~~~lG~~p~~-~l~e~l~~~~~~~~~~  376 (401)
                      +++|||+|++ +|+|+|+++++||+++
T Consensus       297 ~~~LGw~P~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         297 RDELGWTPQFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             HHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence            9999999986 6999999999999987

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.2e-38  Score=298.21  Aligned_cols=288  Identities=19%  Similarity=0.208  Sum_probs=219.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCH---hhHHH-hhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGN-VVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~~~~-~~~  149 (401)
                      ||||||    |||||||++|+++|+++|| +|+++++.......+..          .++++++.+|.   +++.+ ++.
T Consensus         1 MKILIT----G~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~   66 (342)
T d2blla1           1 MRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK   66 (342)
T ss_dssp             CEEEEE----TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh
Confidence            689999    9999999999999999995 89999887654433222          24788999983   34444 454


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCC------CCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV------VKP  207 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~------~~~  207 (401)
                      +  +|+|||+|+.                |+.++.+++++|.+.++ +++++||..+|+........|...      ...
T Consensus        67 ~--~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (342)
T d2blla1          67 K--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  143 (342)
T ss_dssp             H--CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTC
T ss_pred             C--CCccccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCC
Confidence            4  6999999994                58889999999999998 578899999999876555544332      222


Q ss_pred             CCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC---------CcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          208 DAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       208 ~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                      +...|+.+|.+.|         ++++++++|++.+||++...         .....++.+++.|+++.++++|++.++|+
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i  223 (342)
T d2blla1         144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT  223 (342)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECE
T ss_pred             CcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeec
Confidence            2355666665544         38999999999999985432         15677889999999999999999999999


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC-CCCHHHHHHHHHHHhCCCceEEecCCCcccccc-----cccCCCccce
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA-----KKAFPFRNMH  342 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~-~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  342 (401)
                      |++|+++++..+++++.. ..|++||+++++ .+|+.|+++.+.+.+|........++.......     ....+....+
T Consensus       224 ~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (342)
T d2blla1         224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEH  303 (342)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCC
T ss_pred             ccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccc
Confidence            999999999999998643 336899998775 479999999999999877655444433221110     0011112244


Q ss_pred             EeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC
Q 015746          343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  379 (401)
Q Consensus       343 ~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  379 (401)
                      ..+|++|++++|||+|+++++|+|+++++||+++...
T Consensus       304 ~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~~~  340 (342)
T d2blla1         304 RKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  340 (342)
T ss_dssp             CCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred             cccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCcCC
Confidence            5679999999999999999999999999999988543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.9e-37  Score=291.97  Aligned_cols=281  Identities=17%  Similarity=0.138  Sum_probs=220.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      |+||||    |||||||++|+++|+++||+|++++|.......      .++..+. .++++++.+|   .+.+.+.+..
T Consensus         1 k~vLIt----G~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~------~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   70 (321)
T d1rpna_           1 RSALVT----GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR------WRLRELGIEGDIQYEDGDMADACSVQRAVIK   70 (321)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH------HHHHHhcccCCcEEEEccccChHHhhhhhcc
Confidence            689999    999999999999999999999999997643221      1111111 2467888888   6777777777


Q ss_pred             CcccEEEeCCCC----------------ChhhHHHHHHHHHhCCCC-EEEEecccccccCCCCCCCCCCCCCCCCCChHH
Q 015746          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (401)
Q Consensus       151 ~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~  213 (401)
                      ..+++++|+++.                |+.++.+++++|++.+++ +|++.||..+|+.....+.+|+++..+. +.|+
T Consensus        71 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~-~~Y~  149 (321)
T d1rpna_          71 AQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR-SPYG  149 (321)
T ss_dssp             HCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHH
T ss_pred             ccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc-ChhH
Confidence            667899999873                578899999999999864 8999999999998888888888887765 6777


Q ss_pred             HHHHHHH---------hCCCeEEEecCeeecCCCCCCc----HHHHHHHHHcC-CCcccCCCCcceeeeeeHHHHHHHHH
Q 015746          214 VEKYISE---------NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLT  279 (401)
Q Consensus       214 ~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~~~~  279 (401)
                      ..|+..|         ++++++++||+++|||......    +..++.++..+ .+...+|++++.++|+|++|+|++++
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~  229 (321)
T d1rpna_         150 VAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMW  229 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHH
Confidence            6555444         3899999999999999755443    22334455554 44556899999999999999999999


Q ss_pred             HHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceE-EecCCCcccccccccCCCccceEeechHHHHHhcCCCC
Q 015746          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI-VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS  358 (401)
Q Consensus       280 ~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p  358 (401)
                      .+++++..   +.||+++++.+++.++++.+.+.+|.+.+. ...++...       .|.....+..|++|++++|||+|
T Consensus       230 ~~~~~~~~---~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------rp~~~~~~~~d~~k~~k~lG~~P  299 (321)
T d1rpna_         230 LMLQQDKA---DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF-------RPAEVDVLLGNPAKAQRVLGWKP  299 (321)
T ss_dssp             HHHHSSSC---CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC-------CSSCCCBCCBCTHHHHHHHCCCC
T ss_pred             HHHhcCCc---CCceecccccceehhhhHHHHHHhCCCccceeecCCCCC-------CCCccCCccCCHHHHHHHHCCCc
Confidence            99998764   689999999999999999999999987432 22222111       12233566789999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHh
Q 015746          359 TTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       359 ~~~l~e~l~~~~~~~~~~  376 (401)
                      +++|+|+|+++++||.+.
T Consensus       300 ~~~l~e~i~~tv~~~l~~  317 (321)
T d1rpna_         300 RTSLDELIRMMVEADLRR  317 (321)
T ss_dssp             CSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            999999999999998864

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=291.09  Aligned_cols=293  Identities=16%  Similarity=0.134  Sum_probs=222.4

Q ss_pred             CeE-EEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCC-CCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           75 KKV-LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        75 ~~V-lVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ||| |||    |||||||++|+++|+++||+|++++|........+-. ...........+++++.+|   .+.+..++.
T Consensus         1 kKI~LVT----G~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   76 (347)
T d1t2aa_           1 RNVALIT----GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIIN   76 (347)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEe----cCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHh
Confidence            578 999    9999999999999999999999999976432211000 0001111222467888887   778888888


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC---CEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv---~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~  210 (401)
                      +.++++|+|+++.                |+.++.+++++|++.++   ++|||+||..|||.....|++|+++..|. +
T Consensus        77 ~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~-~  155 (347)
T d1t2aa_          77 EVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR-S  155 (347)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC-S
T ss_pred             hcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCC-C
Confidence            8788999999883                57789999999999875   38999999999998888899999988765 6


Q ss_pred             hHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCc-----HHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHH
Q 015746          211 HVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (401)
Q Consensus       211 ~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~  276 (401)
                      .|+..|+..|         ++++++++||+++|||+.....     ...++.....+.+..++|++.+.++|+|++|+++
T Consensus       156 ~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~  235 (347)
T d1t2aa_         156 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence            6766665544         3899999999999999755432     2223444556777888999999999999999999


Q ss_pred             HHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccc-----------cccccCCCccceEee
Q 015746          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI-----------DAKKAFPFRNMHFYA  345 (401)
Q Consensus       277 ~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~  345 (401)
                      ++..++++...   +.|++..+...+..+..+.+...++...............           ......|.....+.+
T Consensus       236 a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~  312 (347)
T d1t2aa_         236 AMWLMLQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQG  312 (347)
T ss_dssp             HHHHHHHSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCB
T ss_pred             HHHHHhhcCCC---ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeE
Confidence            99999998764   5788888899999999999999999876553322211110           111223344456678


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVK  375 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~  375 (401)
                      |++|++++|||+|+++|+|+|+++++++.+
T Consensus       313 d~skak~~Lgw~P~~sl~e~i~~~I~~~~~  342 (347)
T d1t2aa_         313 DCTKAKQKLNWKPRVAFDELVREMVHADVE  342 (347)
T ss_dssp             CCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999877654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-36  Score=285.08  Aligned_cols=266  Identities=19%  Similarity=0.280  Sum_probs=213.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      +||||||    |||||||++|+++|+++||.|+++++..+ .                     ...|.+.+..++.+.++
T Consensus         2 kkkIlIT----G~tGfiG~~l~~~L~~~g~~vi~~~~~~~-~---------------------~~~~~~~~~~~~~~~~~   55 (315)
T d1e6ua_           2 KQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDE-L---------------------NLLDSRAVHDFFASERI   55 (315)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHTTCTTEEEECCCTTT-C---------------------CTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHHCcCEEEEecCchh-c---------------------cccCHHHHHHHHhhcCC
Confidence            5799999    99999999999999999999987654431 1                     12367888888888778


Q ss_pred             cEEEeCCCC-----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCC----CCCChH
Q 015746          154 DVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAGHV  212 (401)
Q Consensus       154 d~Vv~~a~~-----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~----~~~~~~  212 (401)
                      |.|+|+++.                 |+.++.+++++|++.++++|||+||.+||+.....+++|+.+..    +..+.|
T Consensus        56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y  135 (315)
T d1e6ua_          56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY  135 (315)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHH
T ss_pred             CEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHH
Confidence            999999862                 68899999999999999999999999999988777787765432    122346


Q ss_pred             HHHHHHHH---------hCCCeEEEecCeeecCCCCCC-----c-----HHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          213 QVEKYISE---------NFSNWASFRPQYMIGSGNNKD-----C-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       213 ~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                      +.+|+..|         .|++++++||++||||++...     .     ...+......+.++.++|++.+.++|+|++|
T Consensus       136 ~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d  215 (315)
T d1e6ua_         136 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD  215 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeeh
Confidence            65554433         389999999999999976432     1     2223455566888899999999999999999


Q ss_pred             HHHHHHHHhcCCCc-------CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeec
Q 015746          274 LSSMLTLAVENPEA-------ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE  346 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-------~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (401)
                      +++++..+++....       .....++++.+...++.++++.+.+.+|.+..+...+....+          .....+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~----------~~~~~~d  285 (315)
T d1e6ua_         216 MAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDG----------TPRKLLD  285 (315)
T ss_dssp             HHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCC----------CSBCCBC
T ss_pred             hHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCC----------CceeccC
Confidence            99999999876532       124689999999999999999999999999888765544332          1345679


Q ss_pred             hHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          347 PRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       347 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      ++|++ +|||+|+++++|+|+++++||+++
T Consensus       286 ~sk~k-~Lg~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         286 VTRLH-QLGWYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             CHHHH-HTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHH-HcCCCCCCCHHHHHHHHHHHHHHc
Confidence            99997 599999999999999999999976

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-37  Score=293.57  Aligned_cols=283  Identities=21%  Similarity=0.234  Sum_probs=212.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |.||||    |||||||++|+++|+++||+|+++++.......    .......+...+++++.+|   .+++..++...
T Consensus         2 K~ILVT----GatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~----~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~   73 (347)
T d1z45a2           2 KIVLVT----GGAGYIGSHTVVELIENGYDCVVADNLSNSTYD----SVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY   73 (347)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTH----HHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCcCeEEEEECCCCcchh----HHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc
Confidence            569999    999999999999999999999999864432210    0012233445678889988   67788888877


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCC----CCCCCCCCCCCCCCCh
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPDAGH  211 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~----~~~~~E~~~~~~~~~~  211 (401)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||.+|||...    ..++.|+.+..|. +.
T Consensus        74 ~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~-~~  152 (347)
T d1z45a2          74 KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-NP  152 (347)
T ss_dssp             CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC-SH
T ss_pred             CCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC-Ch
Confidence            89999999984                688899999999999999999999999998643    3457777766654 66


Q ss_pred             HHHHHHHHH-----------hCCCeEEEecCeeecCCCCC-----------CcHHHHHHHHH-cCCCcccCCCC------
Q 015746          212 VQVEKYISE-----------NFSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIV-RKRPVPIPGSG------  262 (401)
Q Consensus       212 ~~~ek~~~e-----------~g~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~------  262 (401)
                      |+..|.+.|           .+++++++|++++||+....           .++..++..+. .+.++.++|++      
T Consensus       153 Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~  232 (347)
T d1z45a2         153 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  232 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             hHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCC
Confidence            776665544           26889999999999974321           13444444433 34566777654      


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-----CCCcEEEecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-----ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP  337 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-----~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  337 (401)
                      .+.++++++.|++.+++.+++....     ..+++||+++++++++.|+++.+.+.+|.+.++...+.....        
T Consensus       233 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~--------  304 (347)
T d1z45a2         233 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGD--------  304 (347)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------------
T ss_pred             ceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCC--------
Confidence            4567789999999998888764321     124899999999999999999999999998776544433222        


Q ss_pred             CccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 015746          338 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       338 ~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                        ..+..+|++|++++|||+|+++++|+|+++++||+++
T Consensus       305 --~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n  341 (347)
T d1z45a2         305 --VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN  341 (347)
T ss_dssp             --CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             --CCEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence              1456689999999999999999999999999999988

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.6e-35  Score=280.44  Aligned_cols=287  Identities=15%  Similarity=0.152  Sum_probs=213.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCC-CCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-KPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +|+||||    |||||||+||+++|+++||+|++++|........+ ..............++++.+|   .+.+...+.
T Consensus         1 ~k~~LVT----GatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~   76 (339)
T d1n7ha_           1 RKIALIT----GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWID   76 (339)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEe----CCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHh
Confidence            4789999    99999999999999999999999999654321111 000011122333467788888   566777777


Q ss_pred             CCcccEEEeCCCC----------------ChhhHHHHHHHHHhC-----CCCEEEEecccccccCCCCCCCCCCCCCCCC
Q 015746          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-----GVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (401)
Q Consensus       150 ~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~-----gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~  208 (401)
                      ..++|+|||+|+.                |+.++.++++++++.     ...++++.||..+|+... .+++|+++..|.
T Consensus        77 ~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~  155 (339)
T d1n7ha_          77 VIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPR  155 (339)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCC
T ss_pred             hhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCc
Confidence            7778999999994                466788899988764     334788888888887653 578898888765


Q ss_pred             CChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCCcHHHH----H-HHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          209 AGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWF----F-DRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       209 ~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                       +.|+..|...|         ++++++++||++||||+.........    + .....+.+..+.|++.+.++|+|++|+
T Consensus       156 -~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~  234 (339)
T d1n7ha_         156 -SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY  234 (339)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred             -chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehH
Confidence             77887776555         38999999999999997655433222    2 223345556677899999999999999


Q ss_pred             HHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCCceE-EecCCCcccccccccCCCccceEeechHHHHHh
Q 015746          275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI-VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI  353 (401)
Q Consensus       275 a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  353 (401)
                      ++++..+++++..   ..+++..+...+..|+++.+.+.+|...+. .......       ..|.....+.+|++|++++
T Consensus       235 a~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~d~~Kak~~  304 (339)
T d1n7ha_         235 VEAMWLMLQQEKP---DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAKEV  304 (339)
T ss_dssp             HHHHHHHHTSSSC---CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHHHH
T ss_pred             HHHHHHHHhcCCC---CccccccccccccchhhhhhhhhhhcccCceeeeccCC-------CCCCCCCeeeECHHHHHHH
Confidence            9999999998765   567777788899999999999999876432 1111111       1122335667899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHh
Q 015746          354 LGWRSTTNLPEDLKERFEEYVKI  376 (401)
Q Consensus       354 lG~~p~~~l~e~l~~~~~~~~~~  376 (401)
                      |||+|+++|+|+|+++++||.+.
T Consensus       305 LGw~P~~~le~gi~~ti~~~~~~  327 (339)
T d1n7ha_         305 LGWKPQVGFEKLVKMMVDEDLEL  327 (339)
T ss_dssp             HCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             HCCCcCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999876

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-35  Score=287.10  Aligned_cols=289  Identities=16%  Similarity=0.169  Sum_probs=215.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecC----------CCCcccCCC--CCCCcccchhcCCCeEEEcC-
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG----------DENSDKMKK--PPFNRFNEIVSAGGKTVWGD-  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~----------~~~~~~~~~--~~~~~~~~l~~~~~~~~~~D-  140 (401)
                      +||||||    |||||||++++++|+++||+|++++.-          .........  ....++..+...+++++.+| 
T Consensus         1 g~kILVT----GatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl   76 (393)
T d1i24a_           1 GSRVMVI----GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   76 (393)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccC
Confidence            4899999    999999999999999999999999621          111111000  00112233445688999998 


Q ss_pred             --HhhHHHhhcCCcccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCC-EEEEecccccccCCCCCC
Q 015746          141 --PAEVGNVVGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPP  198 (401)
Q Consensus       141 --~~~~~~~~~~~~~d~Vv~~a~~-------------------~~~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~~~  198 (401)
                        .+.+.+++++.++|+|||+|+.                   |+.++.+++++|++.+++ +|++.||..+|+.... +
T Consensus        77 ~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~  155 (393)
T d1i24a_          77 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-D  155 (393)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-C
T ss_pred             CCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-c
Confidence              6788889988889999999983                   588999999999998865 6888888888875432 2


Q ss_pred             CCCC--------------CCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCC---------------
Q 015746          199 HVEG--------------DVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK---------------  240 (401)
Q Consensus       199 ~~E~--------------~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~---------------  240 (401)
                      ..|.              .+..| .+.|+.+|++.|         .+++++++||+++||++...               
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~p-~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  234 (393)
T d1i24a_         156 IEEGYITITHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA  234 (393)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCC-CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred             ccccccccccccccccccccccc-ccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccc
Confidence            2221              12222 367777776655         38999999999999986532               


Q ss_pred             ---CcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEe-cCCCCCCHHHHHHHHHHHh--
Q 015746          241 ---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL-VSDRAVTLDGMAKLCAQAA--  314 (401)
Q Consensus       241 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~-~~~~~~t~~el~~~i~~~~--  314 (401)
                         ..+..++.++..++++.++|++.+.++|+|++|+++++..++++....+ ..+.+ .+++.+++.|+++++.+..  
T Consensus       235 ~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g-~~~~~~~~~~~~si~el~~~i~~~~~~  313 (393)
T d1i24a_         235 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAG-EFRVFNQFTEQFSVNELASLVTKAGSK  313 (393)
T ss_dssp             TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTT-CEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred             ccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccc-eeeeecCCCCeeEHHHHHHHHHHHHHh
Confidence               1467788889999999999999999999999999999999999877643 32222 3456799999999998875  


Q ss_pred             -CCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcC
Q 015746          315 -GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  378 (401)
Q Consensus       315 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  378 (401)
                       +.+.+....+.+...        .....+..|++|+++ |||+|+++++++++++++|+++.+.
T Consensus       314 ~~~~~~~~~~~~~~~~--------~~~~~~~~d~~k~~~-LGw~P~~~~~~~i~~~~~~~~~~k~  369 (393)
T d1i24a_         314 LGLDVKKMTVPNPRVE--------AEEHYYNAKHTKLME-LGLEPHYLSDSLLDSLLNFAVQFKD  369 (393)
T ss_dssp             TTCCCCEEEECCSSCS--------CSSCCCCBCCCHHHH-TTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred             hCCCcceeeccCCCCC--------CCccEecCCHHHHHH-cCCccccCHHHHHHHHHHHHHHHHH
Confidence             455555444433221        122456678899975 9999999999999999999988643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=2.7e-35  Score=279.59  Aligned_cols=279  Identities=18%  Similarity=0.253  Sum_probs=212.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      |||||    |||||||++|+++|+++||+|+++++-......      ..+.. ....+++++.+|   .+++.++++++
T Consensus         2 KILVT----GatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~------~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~   71 (338)
T d1orra_           2 KLLIT----GGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT------DNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY   71 (338)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH------HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             EEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCCcccch------hHHHHhhccCCcEEEEcccCCHHHHHHHHHhc
Confidence            79999    999999999999999999999999753322110      01111 112478899998   67888999888


Q ss_pred             cccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEeccccc-ccCCCCCCCC--------------
Q 015746          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHV--------------  200 (401)
Q Consensus       152 ~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~v-y~~~~~~~~~--------------  200 (401)
                      ++|+|||+|+.                |+.++.||+++|++.+++++|+.||..+ |+.....+..              
T Consensus        72 ~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (338)
T d1orra_          72 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNG  151 (338)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred             CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccC
Confidence            89999999984                6889999999999999876666666554 4433322221              


Q ss_pred             --CCCCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCC----cHHHHHHHHHc-----CCCcccCC
Q 015746          201 --EGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVR-----KRPVPIPG  260 (401)
Q Consensus       201 --E~~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~-----~~~~~~~~  260 (401)
                        +..+..+ .+.|+..|...|         ++....++|+..+|++.....    ....++..++.     ++++.++|
T Consensus       152 ~~~~~~~~~-~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  230 (338)
T d1orra_         152 YDESTQLDF-HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISG  230 (338)
T ss_dssp             BCTTSCCCC-CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred             cccCCcccc-ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeC
Confidence              1112222 245555554433         488999999999998754332    45566665543     77889999


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC--CCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS--DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF  338 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~--~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  338 (401)
                      +|.+.++|+|++|++++++.++++.....|++|++..  +..+++.|+++.+.+.+|.+.++...+.+...         
T Consensus       231 ~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~---------  301 (338)
T d1orra_         231 NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESD---------  301 (338)
T ss_dssp             SSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSC---------
T ss_pred             CCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCC---------
Confidence            9999999999999999999999887665568999854  46789999999999999998888776654322         


Q ss_pred             ccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Q 015746          339 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK  375 (401)
Q Consensus       339 ~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~  375 (401)
                       ...+.+|++|++++|||+|+++++|+|+++++||+.
T Consensus       302 -~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         302 -QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             -CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             -cCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence             255678999999999999999999999999999985

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=4.1e-34  Score=277.15  Aligned_cols=288  Identities=20%  Similarity=0.257  Sum_probs=213.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCC---cccCCC---------CCCCcccchhcCCCeEEEcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDEN---SDKMKK---------PPFNRFNEIVSAGGKTVWGD  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~---~~~~~~---------~~~~~~~~l~~~~~~~~~~D  140 (401)
                      .||||||    ||+||||++|+++|++ .||+|+++++-...   ......         .............+.++.+|
T Consensus         2 ~MKVLIT----G~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (383)
T d1gy8a_           2 HMRVLVC----GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (383)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             cCEEEEe----CCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECc
Confidence            4799999    9999999999999996 69999999752211   110000         00000112223467788888


Q ss_pred             ---HhhHHHhhcCCc-ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCC----
Q 015746          141 ---PAEVGNVVGGVT-FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE----  196 (401)
Q Consensus       141 ---~~~~~~~~~~~~-~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~----  196 (401)
                         .+.+.++++..+ +|+|||+|+.                |+.++.++++++++.++++++++|+..+|+....    
T Consensus        78 i~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  157 (383)
T d1gy8a_          78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (383)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             ccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccc
Confidence               567888887553 5999999984                6889999999999999999999999999986532    


Q ss_pred             ---CCCCCCCCCCCCCChHHHHHHHHH---------hCCCeEEEecCeeecCCCCCC----------cHHHHHHHHH---
Q 015746          197 ---PPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIV---  251 (401)
Q Consensus       197 ---~~~~E~~~~~~~~~~~~~ek~~~e---------~g~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~---  251 (401)
                         .++.|+++..|. +.|+..|...|         +|++++++||+++|||+....          ..+.++.+++   
T Consensus       158 ~~~~~~~e~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~  236 (383)
T d1gy8a_         158 TNAEPIDINAKKSPE-SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (383)
T ss_dssp             -CCCCBCTTSCCBCS-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCC-CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence               345566666554 66776664443         389999999999999976532          2333333332   


Q ss_pred             -------------cCCCcccCC------CCcceeeeeeHHHHHHHHHHHhcCCCc-------CCCcEEEecCCCCCCHHH
Q 015746          252 -------------RKRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPEA-------ASSNIFNLVSDRAVTLDG  305 (401)
Q Consensus       252 -------------~~~~~~~~~------~~~~~~~~v~v~D~a~~~~~~~~~~~~-------~~g~~~~~~~~~~~t~~e  305 (401)
                                   .++++.++|      +|.+.++|+|++|++++++.+++....       ..+++||+++++++++.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e  316 (383)
T d1gy8a_         237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (383)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence                         234444544      578899999999999999999864221       225799999999999999


Q ss_pred             HHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHH-HHHHHHh
Q 015746          306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER-FEEYVKI  376 (401)
Q Consensus       306 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~-~~~~~~~  376 (401)
                      +++.+.+.+|.+.++...+.+..+          .....+|++|++++|||+|+++++|+|+++ ++||+.+
T Consensus       317 l~~~i~~~~~~~~~~~~~~~~~~d----------~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         317 VIEVARKTTGHPIPVRECGRREGD----------PAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             HHHHHHHHHCCCCCEEEECCCTTC----------CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCCCCceEECCCCCCC----------cCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            999999999999888766554322          256778999999999999999999999997 5777765

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=2.9e-34  Score=265.63  Aligned_cols=259  Identities=19%  Similarity=0.200  Sum_probs=214.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      ||||||    |||||||++|+++|.++||+|++++|..-+                       ..|.+++.+++++.++|
T Consensus         2 MKIlIt----GasGfiG~~l~~~L~~~g~~Vi~~~r~~~D-----------------------~~d~~~~~~~l~~~~~d   54 (281)
T d1vl0a_           2 MKILIT----GANGQLGREIQKQLKGKNVEVIPTDVQDLD-----------------------ITNVLAVNKFFNEKKPN   54 (281)
T ss_dssp             EEEEEE----STTSHHHHHHHHHHTTSSEEEEEECTTTCC-----------------------TTCHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEEEEeechhcc-----------------------CCCHHHHHHHHHHcCCC
Confidence            789999    999999999999999999999999886521                       12788899999887899


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHH
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~  214 (401)
                      +|||+++.                |+....++.++++..+. .++++||..+|+.....++.|.++..+.    ..++..
T Consensus        55 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~  133 (281)
T d1vl0a_          55 VVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEG  133 (281)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EEEeeccccccccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHH
Confidence            99999984                34566677777777765 7999999999999888889998887765    234556


Q ss_pred             HHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEE
Q 015746          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  294 (401)
Q Consensus       215 ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~  294 (401)
                      |+++.+.+.+++++||+++||++.+  +...++..+..+++..++++  +.++++|++|+++++..++++...   ++||
T Consensus       134 e~~~~~~~~~~~i~R~~~vyG~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~~~~~~~~~~~~~~---g~~~  206 (281)
T d1vl0a_         134 ENFVKALNPKYYIVRTAWLYGDGNN--FVKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVVLKVIDEKNY---GTFH  206 (281)
T ss_dssp             HHHHHHHCSSEEEEEECSEESSSSC--HHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHHHHHHHHTCC---EEEE
T ss_pred             HHHHHHhCCCccccceeEEeCCCcc--cccchhhhhccCCceeecCC--ceeccchhhhhhhhhhhhhhhccc---Ccee
Confidence            7777778999999999999999753  56677888888888877764  779999999999999999988764   6999


Q ss_pred             ecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHHHHHHHHHHHH
Q 015746          295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  374 (401)
Q Consensus       295 ~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~~~  374 (401)
                      +++++.+|+.|+++.+++.+|.+.++.+++.......+.     ++.+..+|++|+++.|||+|+ +|+|+|++++++++
T Consensus       207 ~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~-----rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         207 CTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAK-----RPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             CCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSC-----CCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             EeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCC-----CccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence            999999999999999999999999888776443322111     223445899999999999997 89999999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=5.8e-33  Score=265.79  Aligned_cols=295  Identities=16%  Similarity=0.110  Sum_probs=214.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+||||||    |||||||++|++.|+++||+|++++|...+...+...      .....+++++.+|   ++.+.+++
T Consensus         6 ~~~KkILVT----G~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~------~~~~~~i~~~~~Dl~d~~~l~~~~   75 (356)
T d1rkxa_           6 WQGKRVFVT----GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET------ARVADGMQSEIGDIRDQNKLLESI   75 (356)
T ss_dssp             HTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH------TTTTTTSEEEECCTTCHHHHHHHH
T ss_pred             hCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhh------hhcccCCeEEEeeccChHhhhhhh
Confidence            457999999    9999999999999999999999999988655432100      0012478899997   67778888


Q ss_pred             cCCcccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-CEEEEecccccccCCC-CCCCCCCCCCCCCCC
Q 015746          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPAD-EPPHVEGDVVKPDAG  210 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~----------------~~~~~~~ll~aa~~~gv-~~~v~~SS~~vy~~~~-~~~~~E~~~~~~~~~  210 (401)
                      ....+|+|+|+++.                |+.++.+++++|++.+. +.+++.|+..+|.... ..+..|+.+..|. +
T Consensus        76 ~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~-~  154 (356)
T d1rkxa_          76 REFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-D  154 (356)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS-S
T ss_pred             hhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCC-C
Confidence            87789999999984                67889999999999764 4566666665555433 3345555555443 5


Q ss_pred             hHHHHHHHHH------------------hCCCeEEEecCeeecCCCCC--CcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          211 HVQVEKYISE------------------NFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       211 ~~~~ek~~~e------------------~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                      .|+..|...+                  .++.++++||+.+|||++..  .++..++..+..+.+ .+++.+.+.++++|
T Consensus       155 ~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~  233 (356)
T d1rkxa_         155 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQH  233 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCC-EECSCTTCEECCEE
T ss_pred             ccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCc-eEEeeccccccccc
Confidence            6665554333                  26789999999999998633  355666666655554 56788899999999


Q ss_pred             HHHHHHHHHHHhcCCCcCC---CcEEE--ecCCCCCCHHHHHHHHHHHhCCCceEEecCCCcccccccccCCCccceEee
Q 015746          271 VRDLSSMLTLAVENPEAAS---SNIFN--LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA  345 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~~~---g~~~~--~~~~~~~t~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (401)
                      ++|++.++..++.++...+   +...+  ...++.++..++++.+.+.++....+.......         |.....+.+
T Consensus       234 v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~  304 (356)
T d1rkxa_         234 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---------PHEAHYLKL  304 (356)
T ss_dssp             THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC----------------CCCCCCB
T ss_pred             cccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC---------CCCcCeeeE
Confidence            9999999999987654321   23333  334567899999999999999887665432221         112255668


Q ss_pred             chHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccCChhh
Q 015746          346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEI  387 (401)
Q Consensus       346 ~~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~~~  387 (401)
                      |++|++++|||+|+++++|+|+++++||++.....+..+|..
T Consensus       305 d~skak~~LGw~P~~~l~egi~~ti~wyk~~~~~~~~~~~~~  346 (356)
T d1rkxa_         305 DCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSGTDMHEYSI  346 (356)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred             cHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            999999999999999999999999999998655444444443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.97  E-value=3.5e-31  Score=252.56  Aligned_cols=276  Identities=14%  Similarity=0.093  Sum_probs=187.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .+++||||    ||+||||++|+++|+++||+|+++.|+..+...+...    +... .......+.+|   .+.+.+++
T Consensus        10 ~gk~VlVT----G~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1          10 EGSLVLVT----GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR----WDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CcCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh----hhccccccccEEEeccccchhhhhhhc
Confidence            46899999    9999999999999999999999999976443321100    0000 01122335455   66777788


Q ss_pred             cCCcccEEEeCCCC-------------ChhhHHHHHHHHHhC-CCCEEEEecccccccCCC---CCC-CCCC--------
Q 015746          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPAD---EPP-HVEG--------  202 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~-gv~~~v~~SS~~vy~~~~---~~~-~~E~--------  202 (401)
                      .++  |.|+|+++.             |+.++.+++++|++. ++++|||+||.+++....   ... ..|.        
T Consensus        82 ~~~--~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~  159 (342)
T d1y1pa1          82 KGA--AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             TTC--SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             ccc--hhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccc
Confidence            776  999999984             688999999999887 699999999987543221   111 1222        


Q ss_pred             --------CCCCCCCChHHHHHHHHH---------h--CCCeEEEecCeeecCCCC----CCcHHHHHHHHHcCCCcccC
Q 015746          203 --------DVVKPDAGHVQVEKYISE---------N--FSNWASFRPQYMIGSGNN----KDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       203 --------~~~~~~~~~~~~ek~~~e---------~--g~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~  259 (401)
                              .+..+ .+.|+..|.+.|         +  ++.++++||+.+|||...    ......++..+..++.....
T Consensus       160 ~~~~~~e~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~  238 (342)
T d1y1pa1         160 KAKTLPESDPQKS-LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHSCTTSTTHH-HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             ccccccccCCCCC-cCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc
Confidence                    11111 234555554433         2  466888999999998532    23566677888887765444


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCC-CceEEecCCCcccccccccCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPF  338 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~  338 (401)
                      + +.+.++|+|++|+|++++.+++++...  ..|++++++.++++|++++|.+.++. ..+. .++......        
T Consensus       239 ~-~~~~~~~v~v~Dva~~~i~~l~~~~~~--g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~-~~~~~~~~~--------  306 (342)
T d1y1pa1         239 A-LMPPQYYVSAVDIGLLHLGCLVLPQIE--RRRVYGTAGTFDWNTVLATFRKLYPSKTFPA-DFPDQGQDL--------  306 (342)
T ss_dssp             H-TCCSEEEEEHHHHHHHHHHHHHCTTCC--SCEEEECCEEECHHHHHHHHHHHCTTSCCCC-CCCCCCCCC--------
T ss_pred             C-CccceeeeeHHHHHHHHHHhhcCcccc--ceEEEEcCCceEHHHHHHHHHHHcCCCcCCc-cCCccCccc--------
Confidence            3 445689999999999999999987763  35667888899999999999999843 2221 122111110        


Q ss_pred             ccceEeechHHHHHhcCCCCCCCHHHHHHHHHHH
Q 015746          339 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  372 (401)
Q Consensus       339 ~~~~~~~~~~k~~~~lG~~p~~~l~e~l~~~~~~  372 (401)
                      . ........+..+.|||.+.++++|+|+++++.
T Consensus       307 ~-~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s  339 (342)
T d1y1pa1         307 S-KFDTAPSLEILKSLGRPGWRSIEESIKDLVGS  339 (342)
T ss_dssp             C-EECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred             c-cccchHHHHHHHHcCCCCCcCHHHHHHHHHHh
Confidence            0 11111233444569999988999999999864

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.1e-29  Score=236.80  Aligned_cols=270  Identities=16%  Similarity=0.200  Sum_probs=175.9

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-HhhHHHhhcC---C
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGG---V  151 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~~~---~  151 (401)
                      ||||    ||+||||++|+++|+++|+ +|+++++-.....         ...+....+.- ..| .+.....+..   .
T Consensus         2 ILIT----GgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   67 (307)
T d1eq2a_           2 IIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------FVNLVDLNIAD-YMDKEDFLIQIMAGEEFG   67 (307)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---------GHHHHTSCCSE-EEEHHHHHHHHHTTCCCS
T ss_pred             EEEe----cCccHHHHHHHHHHHhCCCCeEEEEECCCCcch---------hhcccccchhh-hccchHHHHHHhhhhccc
Confidence            8999    9999999999999999996 7888864332211         11122112221 223 2223333322   2


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHH
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~  217 (401)
                      .+++|+|+|+.              ++.++.+++++++..+++ +|+.||..+|......+..++.+..+ .+.|+..|.
T Consensus        68 ~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~-~~~Y~~~K~  145 (307)
T d1eq2a_          68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKP-LNVYGYSKF  145 (307)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCC-SSHHHHHHH
T ss_pred             chhhhhhhccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc-ccccccccc
Confidence            36899999873              578899999999999986 77777777776655444444444333 366776665


Q ss_pred             HHH---------hCCCeEEEecCeeecCCCCCC-----cHHHHHHHHHcCCCcc-cCCCCcceeeeeeHHHHHHHHHHHh
Q 015746          218 ISE---------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVP-IPGSGMQFTNIAHVRDLSSMLTLAV  282 (401)
Q Consensus       218 ~~e---------~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~D~a~~~~~~~  282 (401)
                      ..|         .+++++++||+++|||+....     ....++.++..++... ..|++.+.++|+|++|+++++..++
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~  225 (307)
T d1eq2a_         146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL  225 (307)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred             hhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh
Confidence            444         389999999999999976432     4555667777776554 4578888999999999999999999


Q ss_pred             cCCCcCCCcEEEecCCCCCCHHHHHHHHHHHhCCC-ceEEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCC
Q 015746          283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN  361 (401)
Q Consensus       283 ~~~~~~~g~~~~~~~~~~~t~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~  361 (401)
                      ++...   ++||+++++.++++|+++++.+..+.. .+....+......        .......|++|+++.+||+|.++
T Consensus       226 ~~~~~---~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~d~~k~~~~~~~~p~~s  294 (307)
T d1eq2a_         226 ENGVS---GIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGR--------YQAFTQADLTNLRAAGYDKPFKT  294 (307)
T ss_dssp             HHCCC---EEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCCC
T ss_pred             hhccc---cccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCC--------CceeeecCHHHHHHHHCCCCCCC
Confidence            87653   799999999999999999998876532 2222222211110        01233468899999999999999


Q ss_pred             HHHHHHHHHHHH
Q 015746          362 LPEDLKERFEEY  373 (401)
Q Consensus       362 l~e~l~~~~~~~  373 (401)
                      ++|+|+++++||
T Consensus       295 l~egi~~~i~w~  306 (307)
T d1eq2a_         295 VAEGVTEYMAWL  306 (307)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhC
Confidence            999999999985

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.96  E-value=6.3e-29  Score=230.91  Aligned_cols=266  Identities=16%  Similarity=0.201  Sum_probs=195.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      ||||||    |||||||++|++.|.++|+.| ++++.....                   .....|.+.+.+++++.+||
T Consensus         1 MKILIt----G~tGfiG~~l~~~L~~~g~~v-~~~~~~~~~-------------------~~Dl~~~~~~~~~i~~~~~D   56 (298)
T d1n2sa_           1 MNILLF----GKTGQVGWELQRSLAPVGNLI-ALDVHSKEF-------------------CGDFSNPKGVAETVRKLRPD   56 (298)
T ss_dssp             CEEEEE----CTTSHHHHHHHHHTTTTSEEE-EECTTCSSS-------------------CCCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEE-EEECCCccc-------------------cCcCCCHHHHHHHHHHcCCC
Confidence            789999    999999999999999998755 444443211                   11112688899999888899


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH-----
Q 015746          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ-----  213 (401)
Q Consensus       155 ~Vv~~a~~----------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~-----  213 (401)
                      +|||+||.                |+.++.+++++|++.++ +++++||..+|+.....|+.|..+..|. +.|+     
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~-~~y~~~k~~  134 (298)
T d1n2sa_          57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL-NVYGKTKLA  134 (298)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS-SHHHHHHHH
T ss_pred             EEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCC-chHhhhhhh
Confidence            99999984                57788999999999986 6999999999998888899999888765 5444     


Q ss_pred             HHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC---CcCCC
Q 015746          214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP---EAASS  290 (401)
Q Consensus       214 ~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~g  290 (401)
                      +|+++.+......++|++..|+..... ....+...+..+.++.+.+  .+.++++|+.|+++++..++...   ... +
T Consensus       135 ~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~~~~~-~  210 (298)
T d1n2sa_         135 GEKALQDNCPKHLIFRTSWVYAGKGNN-FAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEV-A  210 (298)
T ss_dssp             HHHHHHHHCSSEEEEEECSEECSSSCC-HHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGG-C
T ss_pred             hhhhHHhhhcccccccccceeeccCCc-cchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhccccc-c
Confidence            555666667778888877776554322 3444555566666665554  46789999999999998887532   222 4


Q ss_pred             cEEEecCCCCCCHHHHHHHHHHHhCC---Cce---EEecCCCcccccccccCCCccceEeechHHHHHhcCCCCCCCHHH
Q 015746          291 NIFNLVSDRAVTLDGMAKLCAQAAGL---PVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE  364 (401)
Q Consensus       291 ~~~~~~~~~~~t~~el~~~i~~~~g~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~l~e  364 (401)
                      ++||+++++.++..|+++.+.+..+.   ...   +..++.......+     -++.+..+|++|+++.|||+|+ +|+|
T Consensus       211 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a-----~RP~~~~ld~~K~~~~~~~~~~-~~~~  284 (298)
T d1n2sa_         211 GLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPA-----SRPGNSRLNTEKFQRNFDLILP-QWEL  284 (298)
T ss_dssp             EEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSS-----CCCSBCCBCCHHHHHHHTCCCC-BHHH
T ss_pred             ccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccC-----CCccccccCHHHHHHHHCCCCC-cHHH
Confidence            89999999999999999999887633   211   1122211111100     1224456899999999999997 9999


Q ss_pred             HHHHHHHHHHHh
Q 015746          365 DLKERFEEYVKI  376 (401)
Q Consensus       365 ~l~~~~~~~~~~  376 (401)
                      +|+++++++...
T Consensus       285 gl~~~i~~~~~~  296 (298)
T d1n2sa_         285 GVKRMLTEMFTT  296 (298)
T ss_dssp             HHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhh
Confidence            999999998753

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=7.6e-28  Score=224.84  Aligned_cols=238  Identities=14%  Similarity=0.162  Sum_probs=181.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      +++|||||    |||||||++|+++|+++||+|++++|+........   ......+...+++++.+|   .+.+.+++.
T Consensus         2 ~k~KILVt----GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~---~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~   74 (312)
T d1qyda_           2 KKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK---VQMLLYFKQLGAKLIEASLDDHQRLVDALK   74 (312)
T ss_dssp             CCCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH---HHHHHHHHTTTCEEECCCSSCHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH---HHHHhhhccCCcEEEEeecccchhhhhhcc
Confidence            46789999    99999999999999999999999999875432110   112234445688888887   777888888


Q ss_pred             CCcccEEEeCCC-----CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCC----CChHHHHHHHHH
Q 015746          150 GVTFDVVLDNNG-----KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISE  220 (401)
Q Consensus       150 ~~~~d~Vv~~a~-----~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~----~~~~~~ek~~~e  220 (401)
                      +.  ++++++++     .+.....+++++|++.+..++++.||.+++......+      ..+.    ..+..++++..+
T Consensus        75 ~~--~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  146 (312)
T d1qyda_          75 QV--DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHA------LQPGSITFIDKRKVRRAIEA  146 (312)
T ss_dssp             TC--SEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCC------CSSTTHHHHHHHHHHHHHHH
T ss_pred             Cc--chhhhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccc------cchhhhhhHHHHHHHHhhcc
Confidence            86  89998876     3678899999999999877888899877765433221      1222    234456777777


Q ss_pred             hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       221 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                      .+++++++||+.+||+..... ...+......++.+.+++++++.++|+|++|+|++++.+++++...++.+|++++++.
T Consensus       147 ~~~~~~i~r~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~  225 (312)
T d1qyda_         147 ASIPYTYVSSNMFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI  225 (312)
T ss_dssp             TTCCBCEEECCEEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGE
T ss_pred             cccceEEeccceeecCCccch-hhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcC
Confidence            899999999999999743321 1111222335667788899999999999999999999999998776644567777788


Q ss_pred             CCHHHHHHHHHHHhCCCceEEecCCC
Q 015746          301 VTLDGMAKLCAQAAGLPVEIVHYDPK  326 (401)
Q Consensus       301 ~t~~el~~~i~~~~g~~~~~~~~~~~  326 (401)
                      +|++|+++.+++++|.+.++..++..
T Consensus       226 ~s~~e~~~~~~~~~g~~~~~~~i~~~  251 (312)
T d1qyda_         226 LSQKEVIQIWERLSEQNLDKIYISSQ  251 (312)
T ss_dssp             EEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred             CCHHHHHHHHHHHHCCCCeEEECCHH
Confidence            99999999999999999988777653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-26  Score=202.13  Aligned_cols=191  Identities=18%  Similarity=0.191  Sum_probs=150.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      |.|+||+||    ||||+||++++++|+++||+|++++|++++...           ....+++++.+|   .+++.+++
T Consensus         1 m~~kkIlV~----GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~~gD~~d~~~l~~al   65 (205)
T d1hdoa_           1 MAVKKIAIF----GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----------EGPRPAHVVVGDVLQAADVDKTV   65 (205)
T ss_dssp             CCCCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----------SSCCCSEEEESCTTSHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-----------ccccccccccccccchhhHHHHh
Confidence            458999999    999999999999999999999999998876532           223478899998   78888889


Q ss_pred             cCCcccEEEeCCCC---------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 015746          149 GGVTFDVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS  219 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~---------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~  219 (401)
                      .++  |+|||++|.         +..+++++++++++.|++|||++||.++|.+....+....   .....+...|++++
T Consensus        66 ~~~--d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~---~~~~~~~~~e~~l~  140 (205)
T d1hdoa_          66 AGQ--DAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQ---AVTDDHIRMHKVLR  140 (205)
T ss_dssp             TTC--SEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGH---HHHHHHHHHHHHHH
T ss_pred             cCC--CEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccccccc---ccchHHHHHHHHHH
Confidence            886  999999884         3677899999999999999999999999876543221100   00124556788999


Q ss_pred             HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecC
Q 015746          220 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (401)
Q Consensus       220 e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~  297 (401)
                      +.+++|++|||+.+++.....              ...+..++.....+|+++|+|++++.+++++...+ +.+.+..
T Consensus       141 ~~~~~~tiirp~~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g-~~~~~s~  203 (205)
T d1hdoa_         141 ESGLKYVAVMPPHIGDQPLTG--------------AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDG-HSTYPSH  203 (205)
T ss_dssp             HTCSEEEEECCSEEECCCCCS--------------CCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTT-CEEEEEC
T ss_pred             hcCCceEEEecceecCCCCcc--------------cEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCC-EEEecCC
Confidence            999999999999998754322              22334455666789999999999999999987654 7776654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=4e-28  Score=225.42  Aligned_cols=241  Identities=17%  Similarity=0.197  Sum_probs=181.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++||||||    |||||||++++++|+++||+|++++|+.........  ...+..+...+++++.+|   ...+.+.+.
T Consensus         2 ~kkKILVt----GatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (307)
T d1qyca_           2 SRSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK--AQLLESFKASGANIVHGSIDDHASLVEAVK   75 (307)
T ss_dssp             CCCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH--HHHHHHHHTTTCEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH--HHHHHhhccCCcEEEEeecccchhhhhhhh
Confidence            46899999    999999999999999999999999998755432110  012234445678888888   666667777


Q ss_pred             CCcccEEEeCCCC-ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCeEEE
Q 015746          150 GVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF  228 (401)
Q Consensus       150 ~~~~d~Vv~~a~~-~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~~il  228 (401)
                      +.  +.|+|+++. +..+..+++++++..+++++++.|+.+.+....  +..+.... ....+...++++.+.+++++++
T Consensus        76 ~~--~~vi~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~  150 (307)
T d1qyca_          76 NV--DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNV--HAVEPAKS-VFEVKAKVRRAIEAEGIPYTYV  150 (307)
T ss_dssp             TC--SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSC--CCCTTHHH-HHHHHHHHHHHHHHHTCCBEEE
T ss_pred             hc--eeeeecccccccchhhHHHHHHHHhccccceeeeccccccccc--cccccccc-cccccccccchhhccCCCceec
Confidence            75  999998874 567888999999999988899988865543221  11110000 0113455777888889999999


Q ss_pred             ecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCHHHHHH
Q 015746          229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK  308 (401)
Q Consensus       229 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~~el~~  308 (401)
                      ||+++||+....  +..++....++....+++++++.++|+|++|+|++++.+++++...++.+|++++++.+|+.|+++
T Consensus       151 r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~  228 (307)
T d1qyca_         151 SSNCFAGYFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVA  228 (307)
T ss_dssp             ECCEEHHHHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred             ccceecCCCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHH
Confidence            999999975432  122233455566777889999999999999999999999998877664567777789999999999


Q ss_pred             HHHHHhCCCceEEecCCC
Q 015746          309 LCAQAAGLPVEIVHYDPK  326 (401)
Q Consensus       309 ~i~~~~g~~~~~~~~~~~  326 (401)
                      .+.+++|.+.++..++..
T Consensus       229 ~~~~~~G~~~~~~~~~~~  246 (307)
T d1qyca_         229 LWEKKIDKTLEKAYVPEE  246 (307)
T ss_dssp             HHHHHTTSCCEEEEECHH
T ss_pred             HHHHHHCCCCcEEECCHH
Confidence            999999999988777643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.9e-24  Score=193.00  Aligned_cols=193  Identities=22%  Similarity=0.243  Sum_probs=145.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      +++|+||||    |||||||++|+++|+++|+  +|++++|++.+...           .....+....+|   .+++..
T Consensus        12 m~~k~IlIt----GaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-----------~~~~~i~~~~~D~~~~~~~~~   76 (232)
T d2bkaa1          12 MQNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----------EAYKNVNQEVVDFEKLDDYAS   76 (232)
T ss_dssp             HTCCEEEEE----CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----------GGGGGCEEEECCGGGGGGGGG
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-----------cccceeeeeeecccccccccc
Confidence            456899999    9999999999999999995  89999998754321           112367777778   445556


Q ss_pred             hhcCCcccEEEeCCCC-------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHH
Q 015746          147 VVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~-------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~  213 (401)
                      ++.++  |+|||+++.             |+.++.+++++|++.++++|||+|+.+++..... +        +..+|+.
T Consensus        77 ~~~~~--d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~-~--------Y~~~K~~  145 (232)
T d2bkaa1          77 AFQGH--DVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNF-L--------YLQVKGE  145 (232)
T ss_dssp             GGSSC--SEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS-H--------HHHHHHH
T ss_pred             ccccc--ccccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccc-h--------hHHHHHH
Confidence            66665  999999984             4678899999999999999999999988754321 1        1236777


Q ss_pred             HHHHHHHhCCC-eEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcE
Q 015746          214 VEKYISENFSN-WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (401)
Q Consensus       214 ~ek~~~e~g~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~  292 (401)
                      +|+++.+.+++ ++|+||+.+||++........++..+....+     ........||++|+|++++.++.++..  +++
T Consensus       146 ~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~I~~~dvA~a~i~~~~~~~~--~~~  218 (232)
T d2bkaa1         146 VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLP-----DSWASGHSVPVVTVVRAMLNNVVRPRD--KQM  218 (232)
T ss_dssp             HHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCC-----TTGGGGTEEEHHHHHHHHHHHHTSCCC--SSE
T ss_pred             hhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccC-----CcccCCCeEEHHHHHHHHHHHHhcCcc--CCe
Confidence            88888888875 8999999999997765555555555544322     223334579999999999999988876  356


Q ss_pred             EEecC
Q 015746          293 FNLVS  297 (401)
Q Consensus       293 ~~~~~  297 (401)
                      +.+.+
T Consensus       219 ~i~~~  223 (232)
T d2bkaa1         219 ELLEN  223 (232)
T ss_dssp             EEEEH
T ss_pred             EEEcH
Confidence            66553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=8e-24  Score=189.77  Aligned_cols=212  Identities=16%  Similarity=0.185  Sum_probs=151.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCe--EEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE--VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      +|++||||    |||||||++++++|+++||+  |+.+.|++++...+            ..+++++.+|   .+++.++
T Consensus         2 ~~~tVlVt----GatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~   65 (252)
T d2q46a1           2 NLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPA   65 (252)
T ss_dssp             SCCEEEEE----STTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc------------cCCcEEEEeeeccccccccc
Confidence            47899999    99999999999999999976  55567766443221            2367888887   7778888


Q ss_pred             hcCCcccEEEeCCCC-----------------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          148 VGGVTFDVVLDNNGK-----------------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~-----------------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      ++++  |+|||+++.                             ++.++.++++.+...+.+++.+.|+...+.....  
T Consensus        66 ~~~~--d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~--  141 (252)
T d2q46a1          66 FQGI--DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP--  141 (252)
T ss_dssp             HTTC--SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG--
T ss_pred             cccc--eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc--
Confidence            8875  999999872                             4678999999999999999999998777654321  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHH
Q 015746          199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~  278 (401)
                      ............++..+++..+.+++++++||+++||+.....       .+..+......   ....+++|++|+|+++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~---~~~~~~i~~~Dva~a~  211 (252)
T d2q46a1         142 LNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-------ELLVGKDDELL---QTDTKTVPRADVAEVC  211 (252)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSS-------CEEEESTTGGG---GSSCCEEEHHHHHHHH
T ss_pred             cccccccchhhhhhhhhhhhhcccccceeecceEEECCCcchh-------hhhhccCcccc---cCCCCeEEHHHHHHHH
Confidence            1111111111234445666677799999999999999975431       11111111111   1235789999999999


Q ss_pred             HHHhcCCCcCCCcEEEecCCC---CCCHHHHHHHHHHHhC
Q 015746          279 TLAVENPEAASSNIFNLVSDR---AVTLDGMAKLCAQAAG  315 (401)
Q Consensus       279 ~~~~~~~~~~~g~~~~~~~~~---~~t~~el~~~i~~~~g  315 (401)
                      +.+++++... |++||++++.   ..+++|+.+++.++.+
T Consensus       212 ~~~l~~~~~~-g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         212 IQALLFEEAK-NKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             HHHTTCGGGT-TEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             HHHhCCcccc-CcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            9999988765 4899998743   4667788777766544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.89  E-value=3.9e-23  Score=196.79  Aligned_cols=234  Identities=14%  Similarity=0.032  Sum_probs=169.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~~~~~~  148 (401)
                      ++|+||||    |||||||++|+++|+++||+|++++|+..+....        .....++++++.+|    .+.++.++
T Consensus         2 ~kktIlVt----GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--------~~~~~~~v~~~~gD~~d~~~~~~~a~   69 (350)
T d1xgka_           2 QKKTIAVV----GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--------ELQAIPNVTLFQGPLLNNVPLMDTLF   69 (350)
T ss_dssp             CCCCEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--------HHHTSTTEEEEESCCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--------hhcccCCCEEEEeeCCCcHHHHHHHh
Confidence            46899999    9999999999999999999999999987654210        11122478999998    34467788


Q ss_pred             cCCcccEEEeCCC----CChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCC
Q 015746          149 GGVTFDVVLDNNG----KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (401)
Q Consensus       149 ~~~~~d~Vv~~a~----~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~  224 (401)
                      .++  |++++...    .++..+.+++++|+++|++++|+.||.+........     ........|...++++.+.+++
T Consensus        70 ~~~--~~~~~~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~  142 (350)
T d1xgka_          70 EGA--HLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW-----PAVPMWAPKFTVENYVRQLGLP  142 (350)
T ss_dssp             TTC--SEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC-----CCCTTTHHHHHHHHHHHTSSSC
T ss_pred             cCC--ceEEeecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcc-----cchhhhhhHHHHHHHHHhhccC
Confidence            876  87776543    467889999999999999888888887654332111     1111223677888899999999


Q ss_pred             eEEEecCeeecCCCCCCcHHHHH-HHHHcCC-CcccCCCCcceeeeeeH-HHHHHHHHHHhcCCC-cCCCcEEEecCCCC
Q 015746          225 WASFRPQYMIGSGNNKDCEEWFF-DRIVRKR-PVPIPGSGMQFTNIAHV-RDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (401)
Q Consensus       225 ~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~v~v-~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~  300 (401)
                      ++++|++.+++........ .+. .....+. ....+.+++..+.++++ +|+++++..++.+.. ...|++|+++++ .
T Consensus       143 ~~~vr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~-~  220 (350)
T d1xgka_         143 STFVYAGIYNNNFTSLPYP-LFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-T  220 (350)
T ss_dssp             EEEEEECEEGGGCBSSSCS-SCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE-E
T ss_pred             ceeeeeceeeccccccccc-cccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCC-c
Confidence            9999999988753221100 000 0111111 22444566677888876 799999999997653 334689999874 6


Q ss_pred             CCHHHHHHHHHHHhCCCceEEecCCCc
Q 015746          301 VTLDGMAKLCAQAAGLPVEIVHYDPKA  327 (401)
Q Consensus       301 ~t~~el~~~i~~~~g~~~~~~~~~~~~  327 (401)
                      +|+.|+++.+.+++|+++++..+|...
T Consensus       221 ~T~~eia~~l~~~~G~~v~~~~vp~~~  247 (350)
T d1xgka_         221 LSPVQVCAAFSRALNRRVTYVQVPKVE  247 (350)
T ss_dssp             ECHHHHHHHHHHHHTSCEEEEECSSCC
T ss_pred             CCHHHHHHHHHHHHCCcceEEECCHHH
Confidence            999999999999999999999887654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.88  E-value=1e-22  Score=180.09  Aligned_cols=177  Identities=18%  Similarity=0.161  Sum_probs=124.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .||||||    |||||||++|+++|+++||  +|++++|.+....               +.+.....|..++...+.+ 
T Consensus         2 ~KkIlIt----GatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~~~~~~~d~~~~~~~~~~-   61 (212)
T d2a35a1           2 PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PRLDNPVGPLAELLPQLDG-   61 (212)
T ss_dssp             CCEEEEE----CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TTEECCBSCHHHHGGGCCS-
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------ccccccccchhhhhhcccc-
Confidence            4899999    9999999999999999998  5666666542211               1333344455555444433 


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHH
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~  217 (401)
                      .+|+|||++|.              ++.++.+++++|++.++++|+++||.++++.... +        +..+|+..|+.
T Consensus        62 ~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~-~--------y~~~K~~~E~~  132 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSI-F--------YNRVKGELEQA  132 (212)
T ss_dssp             CCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS-H--------HHHHHHHHHHH
T ss_pred             chheeeeeeeeeccccccccccccchhhhhhhccccccccccccccccccccccccccc-c--------hhHHHHHHhhh
Confidence            36999999884              4678899999999999999999999998764421 0        11256777777


Q ss_pred             HHHhCCC-eEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc
Q 015746          218 ISENFSN-WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       218 ~~e~g~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      +.+.+.+ ++|+||+.|||+.+.......+      ..++.....+  .+.+||++|+|++++.+++++..
T Consensus       133 l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~------~~~~~~~~~~--~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         133 LQEQGWPQLTIARPSLLFGPREEFRLAEIL------AAPIARILPG--KYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             HTTSCCSEEEEEECCSEESTTSCEEGGGGT------TCCCC----C--HHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             ccccccccceeeCCcceeCCcccccHHHHH------HHHHhhccCC--CCcEEEHHHHHHHHHHHHcCCCC
Confidence            7777775 9999999999997654321111      1111111112  24569999999999999988775

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.61  E-value=3.2e-15  Score=133.56  Aligned_cols=186  Identities=17%  Similarity=0.216  Sum_probs=126.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||++.||+.++++|+++|++|++.+|+.+...                .+..+.+|   ++++.+++
T Consensus         5 l~gK~~lIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----------------~~~~~~~Dv~~~~~v~~~~   64 (237)
T d1uzma1           5 FVSRSVLVT----GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------GLFGVEVDVTDSDAVDRAF   64 (237)
T ss_dssp             CCCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------TSEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCcchhc----------------CceEEEEecCCHHHHHHHH
Confidence            467999999    99999999999999999999999999886543                33445555   56665555


Q ss_pred             cCC-----cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||.                    |+    ..++.++..+++.+-.++|++||...+....    
T Consensus        65 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----  140 (237)
T d1uzma1          65 TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG----  140 (237)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------
T ss_pred             HHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc----
Confidence            432     48999999994                    23    3345666677777777999999977653321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|...+            +|+++..|.||.+..+.... ......+.+....|+..         
T Consensus       141 --------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R---------  202 (237)
T d1uzma1         141 --------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFIPAKR---------  202 (237)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGCTTCS---------
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc-cCHHHHHHHHhcCCCCC---------
Confidence                    1245665553322            38999999999986542110 11222333333333322         


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..++|+|.++..++.+... .+|+++.+.||-
T Consensus       203 ~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         203 VGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            34789999999998876543 568999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.60  E-value=5.2e-15  Score=132.57  Aligned_cols=191  Identities=14%  Similarity=0.155  Sum_probs=133.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.++.+...+          ..+.+.+.+|   ++++.++++
T Consensus         4 ~gK~~lIT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~   69 (242)
T d1ulsa_           4 KDKAVLIT----GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFA   69 (242)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998765543211          1256677777   666666554


Q ss_pred             CC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|++||+||.                    |+.+    ++.++..+++.+-..++.+||.+..+...     
T Consensus        70 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~-----  144 (242)
T d1ulsa_          70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLG-----  144 (242)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTT-----
T ss_pred             HHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCC-----
Confidence            43     48999999994                    3333    44555555556666788888865443321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                              ...|.+.|....            +|+++..|.||.+..+.... ....+.+.+....|+..++        
T Consensus       145 --------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R~~--------  207 (242)
T d1ulsa_         145 --------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLGRAG--------  207 (242)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTCSCB--------
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc-CCHHHHHHHHhcCCCCCCC--------
Confidence                    245665553322            38999999999998764332 2334455666666654433        


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                       .++|+|.+++.++.+... .+|+++.+.||..
T Consensus       208 -~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         208 -KPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             -CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             -CHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence             689999999998876543 5689999998864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.58  E-value=1.4e-14  Score=129.11  Aligned_cols=188  Identities=17%  Similarity=0.167  Sum_probs=126.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-HhhHHHhhcCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGV  151 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~~~~  151 (401)
                      ++|+||||    ||++.||+.++++|+++|++|++.+|+.+..+              ..+.+++.+| .++++.+++..
T Consensus         3 kgK~~lVT----Gas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~   64 (234)
T d1o5ia_           3 RDKGVLVL----AASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKV   64 (234)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHS
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHh
Confidence            57899999    99999999999999999999999999875432              2245666777 33444444433


Q ss_pred             -cccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCC
Q 015746          152 -TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (401)
Q Consensus       152 -~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~  206 (401)
                       ++|++||+||.                    |+.    .++.++..+++.+..++|+++|.........          
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~----------  134 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN----------  134 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc----------
Confidence             37999999994                    233    3455555666666668999999776543221          


Q ss_pred             CCCChHHHHHHH------------HHhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          207 PDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       207 ~~~~~~~~ek~~------------~e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                        ...|.+.|..            ..+|+++..|.||.+..+......-....+.+....|+..         +..++|+
T Consensus       135 --~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R---------~~~pedi  203 (234)
T d1o5ia_         135 --LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRR---------MAKPEEI  203 (234)
T ss_dssp             --BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSS---------CBCHHHH
T ss_pred             --cccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCC---------CcCHHHH
Confidence              1344444422            1238999999999987653211111222344444444433         3478999


Q ss_pred             HHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          275 SSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       275 a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      |.+++.++.+... .+|+++.+.||-
T Consensus       204 A~~v~fL~S~~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         204 ASVVAFLCSEKASYLTGQTIVVDGGL  229 (234)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhChhhcCCcCcEEEECccc
Confidence            9999998876543 568999999874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.57  E-value=9.7e-15  Score=131.53  Aligned_cols=197  Identities=16%  Similarity=0.213  Sum_probs=132.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.++.+++..    .+... ...+..+.+|   ++++.+++
T Consensus         8 lenKvalIT----Gas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~----~l~~~-g~~~~~~~~Dvt~~~~v~~~~   78 (251)
T d2c07a1           8 GENKVALVT----GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVD----EIKSF-GYESSGYAGDVSKKEEISEVI   78 (251)
T ss_dssp             CSSCEEEEE----STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH----HHHTT-TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HHHhc-CCcEEEEEccCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998765543211    11111 1245677777   56666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+++.                    |+.    .++.++..+++.+-.++|++||...+....    
T Consensus        79 ~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----  154 (251)
T d2c07a1          79 NKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV----  154 (251)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----
T ss_pred             HHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC----
Confidence            432     58999999994                    333    345555556666666999999987654321    


Q ss_pred             CCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|...            .+|+++..|.||.+..+.... ....+.+.+....|+..+        
T Consensus       155 --------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R~--------  217 (251)
T d2c07a1         155 --------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPAGRM--------  217 (251)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTSSC--------
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc-cCHHHHHHHHhcCCCCCC--------
Confidence                    124566555322            248999999999998764332 223345555555554333        


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                       ..++|+|.+++.++.+... .+|+++.+.||-
T Consensus       218 -~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         218 -GTPEEVANLACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             -BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             -cCHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence             3789999999998876554 568999999873

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.5e-14  Score=129.76  Aligned_cols=194  Identities=16%  Similarity=0.177  Sum_probs=131.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|+||||    ||++.||+.++++|+++|++|++++|+.++.+.+..       ++  .++..+.+|   .+++++++
T Consensus         5 L~GK~~lIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~-------~~--~~~~~~~~Dv~d~~~v~~~~   71 (244)
T d1pr9a_           5 LAGRRVLVT----GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR-------EC--PGIEPVCVDLGDWEATERAL   71 (244)
T ss_dssp             CTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HS--TTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-------hc--CCCeEEEEeCCCHHHHHHHH
Confidence            357899999    999999999999999999999999998866543221       11  256666777   77888888


Q ss_pred             cCC-cccEEEeCCCC--------------------Chhh----HHHHHHH-HHhCCCCEEEEecccccccCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK--------------------NLDA----VRPVADW-AKSSGVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~--------------------~~~~----~~~ll~a-a~~~gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      +.. ++|++||+|+.                    |+.+    ++.++.. .++.+..++|++||...+....       
T Consensus        72 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~-------  144 (244)
T d1pr9a_          72 GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-------  144 (244)
T ss_dssp             TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-------
T ss_pred             HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc-------
Confidence            776 48999999994                    2333    4444443 2333446899999987654321       


Q ss_pred             CCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          203 DVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                           ....|.+.|...         |   +|+++..|.||.+..+..... .-....+.+....|+..         +.
T Consensus       145 -----~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R---------~~  210 (244)
T d1pr9a_         145 -----NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGK---------FA  210 (244)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCS---------CB
T ss_pred             -----chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCC---------Cc
Confidence                 124555555222         2   389999999999876521110 01123444555444432         34


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .++|+|.++..++.+... .+|+++++.||-
T Consensus       211 ~peevA~~v~fL~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         211 EVEHVVNAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCchhCCcCCcEEEECccH
Confidence            789999999998876543 568999999874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=4.3e-15  Score=133.19  Aligned_cols=194  Identities=15%  Similarity=0.174  Sum_probs=131.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|++++.+.+.       .++ ..+...+.+|   .+++.++++
T Consensus         3 ~gK~alIT----Gas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~~   70 (243)
T d1q7ba_           3 EGKIALVT----GASRGIGRAIAETLAARGAKVIGTATSENGAQAIS-------DYL-GANGKGLMLNVTDPASIESVLE   70 (243)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHH-GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-------HHh-CCCCcEEEEEecCHHHhhhhhh
Confidence            57899999    99999999999999999999999999886554321       111 2345666777   555555544


Q ss_pred             CC-----cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|++||+||.                    |+    ..++.++..+++.+-.++|++||...+....     
T Consensus        71 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----  145 (243)
T d1q7ba_          71 KIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG-----  145 (243)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----
T ss_pred             hhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC-----
Confidence            32     48999999994                    33    3445555565666656899999987654321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeee
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (401)
                             ....|.+.|...+            +|+++..|.||.+-.+.... ........+....|+..         +
T Consensus       146 -------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~R---------~  208 (243)
T d1q7ba_         146 -------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-LSDDQRAGILAQVPAGR---------L  208 (243)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTCTTSS---------C
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh-hhhhHHHHHHhcCCCCC---------C
Confidence                   1245665553322            38999999999986542111 11222344444444332         3


Q ss_pred             eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       269 v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                      ..++|+|.++..++.+... .+|+++++.||..
T Consensus       209 ~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         209 GGAQEIANAVAFLASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence            4789999999999876543 5689999998853

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.55  E-value=9.6e-15  Score=131.53  Aligned_cols=200  Identities=17%  Similarity=0.194  Sum_probs=132.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.++..+...    ++.+.....+..+.+|   ++++.+++
T Consensus         3 l~gK~~lIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~l~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           3 LRGRVALVT----GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ----KLTEKYGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998765443211    1111122356667777   56666555


Q ss_pred             cCC-----cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||.                    |+    ..++.++..+++.+-.++|++||........    
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~----  150 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM----  150 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC----
Confidence            432     48999999994                    23    4455566666666666999999865422110    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCCccee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                             +....|.+.|....            +|+++..|.||.+-.+..... .-....+.+....|+..++      
T Consensus       151 -------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~------  217 (251)
T d1vl8a_         151 -------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTG------  217 (251)
T ss_dssp             -------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCB------
T ss_pred             -------ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCC------
Confidence                   11245665553222            489999999999976642210 0012344555555543333      


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                         .++|+|++++.++.+... .+|+++.+.+|.
T Consensus       218 ---~pedvA~~v~fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         218 ---VPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             ---CGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ---CHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence               679999999998876543 568999999874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=8.3e-15  Score=132.29  Aligned_cols=197  Identities=14%  Similarity=0.176  Sum_probs=132.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.++.+++.+    ++... ...+..+.+|   ++++.++++
T Consensus        10 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~----~l~~~-g~~~~~~~~Dvs~~~~~~~~~~   80 (255)
T d1fmca_          10 DGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVVD----EIQQL-GGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHH----HHHHT-TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHc-CCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998765543211    11111 1356677787   556655544


Q ss_pred             CC-----cccEEEeCCCC-------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~-------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      ..     ++|++||+||.                   |+.+    ++.++...++.+-.++|++||...+....      
T Consensus        81 ~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~------  154 (255)
T d1fmca_          81 FAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI------  154 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT------
T ss_pred             HHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccc------
Confidence            32     48999999994                   3333    44455555555656899999977654321      


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            ....|.+.|....            +|+++..|.||.+..+......-....+.+....|+..+         .
T Consensus       155 ------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~---------g  219 (255)
T d1fmca_         155 ------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRL---------G  219 (255)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSC---------B
T ss_pred             ------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCC---------c
Confidence                  1255666553322            389999999999876521111122344555555554333         3


Q ss_pred             eHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .++|+|.+++.++.+... .+|+++.+.||.
T Consensus       220 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         220 QPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            689999999999876543 568999999985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.55  E-value=2.6e-14  Score=128.40  Aligned_cols=196  Identities=15%  Similarity=0.200  Sum_probs=123.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.+++.|+++|++|++.+|++.+...      ..... ....+..+.+|   ++++.+++
T Consensus         3 L~gKvalVT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~------~~~~~-~g~~~~~~~~Dvs~~~~v~~~~   71 (247)
T d2ew8a1           3 LKDKLAVIT----GGANGIGRAIAERFAVEGADIAIADLVPAPEAE------AAIRN-LGRRVLTVKCDVSQPGDVEAFG   71 (247)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH------HHHHH-TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH------HHHHH-cCCcEEEEEeeCCCHHHHHHHH
Confidence            457899999    999999999999999999999999997643211      01111 12356677777   56666554


Q ss_pred             cCC-----cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||.                    |+    ..++.++..+++.+-.++|++||........    
T Consensus        72 ~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----  147 (247)
T d2ew8a1          72 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE----  147 (247)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCc----
Confidence            432     48999999994                    23    3445556666666666899999987653321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcC-CCcccCCCCccee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFT  266 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  266 (401)
                              ....|.+.|....            +|+++..|.||.+..+...........+..... .++.         
T Consensus       148 --------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~---------  210 (247)
T d2ew8a1         148 --------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIP---------  210 (247)
T ss_dssp             --------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSC---------
T ss_pred             --------ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCC---------
Confidence                    1245665553322            389999999999876643221111111111111 1221         


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      -+..++|+|++++.++.+... .+|+++.+.||.
T Consensus       211 r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         211 RLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence            244689999999999876543 568999999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=2.2e-14  Score=128.81  Aligned_cols=192  Identities=15%  Similarity=0.106  Sum_probs=126.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.+..+.           ....+..++.+|   .+++.++++
T Consensus         4 ~GK~alIT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-----------~~~~~~~~~~~Dv~~~~~v~~~~~   68 (248)
T d2d1ya1           4 AGKGVLVT----GGARGIGRAIAQAFAREGALVALCDLRPEGKEV-----------AEAIGGAFFQVDLEDERERVRFVE   68 (248)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH-----------HHHHTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-----------HHHcCCeEEEEeCCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998754321           112245667777   555555554


Q ss_pred             CC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~  200 (401)
                      ..     ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||...+....     
T Consensus        69 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~-----  143 (248)
T d2d1ya1          69 EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ-----  143 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT-----
T ss_pred             HHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccc-----
Confidence            32     48999999994                    3333    44555566666666999999987654321     


Q ss_pred             CCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCC-----CCcHHHHHHHHHcCCCcccCCCCc
Q 015746          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       201 E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                             ....|.+.|....            +|+++..|.||.+-.+...     ......+.+.+....|+.      
T Consensus       144 -------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------  210 (248)
T d2d1ya1         144 -------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR------  210 (248)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS------
T ss_pred             -------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCC------
Confidence                   1245665553222            3899999999998654100     000011122222223322      


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                         -+..++|+|+++..++.+... .+|+++.+.||..
T Consensus       211 ---R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         211 ---RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             ---SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ---CCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence               244789999999999876544 5689999998853

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=1.2e-14  Score=130.28  Aligned_cols=193  Identities=19%  Similarity=0.190  Sum_probs=130.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++++|+.++..++.+       ++  .++..+.+|   .++++++++
T Consensus         4 ~GK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-------~~--~~~~~~~~Dv~~~~~v~~~~~   70 (242)
T d1cyda_           4 SGLRALVT----GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK-------EC--PGIEPVCVDLGDWDATEKALG   70 (242)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HS--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------hc--CCCeEEEEeCCCHHHHHHHHH
Confidence            47899999    999999999999999999999999998765433211       11  356677777   778888888


Q ss_pred             CC-cccEEEeCCCC--------------------ChhhHHHHHHHH-----HhCCCCEEEEecccccccCCCCCCCCCCC
Q 015746          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADWA-----KSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       150 ~~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa-----~~~gv~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                      .. ++|++||+||.                    |+.+...+.+++     ++.+-.++|++||...+....        
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--------  142 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP--------  142 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC--------
Confidence            76 48999999994                    344444444432     222335899999987654321        


Q ss_pred             CCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC-CcHHHHHHHHHcCCCcccCCCCcceeeeee
Q 015746          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  270 (401)
                          ....|.+.|....            +|+++..|.||.+..+.... .....+.+.+....|+..         +..
T Consensus       143 ----~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R---------~~~  209 (242)
T d1cyda_         143 ----NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRK---------FAE  209 (242)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSS---------CBC
T ss_pred             ----ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCC---------CcC
Confidence                1245665553322            38999999999986541100 000123344444444332         347


Q ss_pred             HHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       271 v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ++|+|++++.++.+... .+|+++.+.||.
T Consensus       210 peeva~~v~fL~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         210 VEDVVNSILFLLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence            89999999998876543 568999999874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.1e-14  Score=129.16  Aligned_cols=195  Identities=15%  Similarity=0.133  Sum_probs=130.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++.+|+.+..+.+..       ++  .++..+.+|   .+++++++
T Consensus         4 l~GK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-------~~--~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1ydea1           4 YAGKVVVVT----GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQ-------EL--PGAVFILCDVTQEDDVKTLV   70 (250)
T ss_dssp             TTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HC--TTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------hc--CCCeEEEccCCCHHHHHHHH
Confidence            357999999    999999999999999999999999998765543221       11  356677777   56666655


Q ss_pred             cCC-----cccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||+||.                     |+.+    ++.++..+++.+ .++|++||...+....   
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~---  146 (250)
T d1ydea1          71 SETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQA---  146 (250)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCT---
T ss_pred             HHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccccc---
Confidence            442     48999999993                     2333    444555555544 5899999987654321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCC-----CCCcHHHHHHHHHcCCCcccCCC
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN-----NKDCEEWFFDRIVRKRPVPIPGS  261 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~  261 (401)
                               ....|.+.|...            .+|+++..|.||.|..+..     ...-....++......|+..   
T Consensus       147 ---------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R---  214 (250)
T d1ydea1         147 ---------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGR---  214 (250)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSS---
T ss_pred             ---------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCC---
Confidence                     125566655322            2489999999999865410     00011122334444444432   


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~  301 (401)
                            +..++|+|.+++.++.+....+|+++.+.+|..+
T Consensus       215 ------~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         215 ------MGQPAEVGAAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             ------CBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             ------CCCHHHHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence                  3478999999999887544457899999988643

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.54  E-value=1.2e-14  Score=130.33  Aligned_cols=189  Identities=18%  Similarity=0.216  Sum_probs=126.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|++++.+.+.       .++ ...+.++.+|   ++++.+++
T Consensus         4 L~gK~alIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~   71 (244)
T d1nffa_           4 LTGKVALVS----GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA-------AEL-ADAARYVHLDVTQPAQWKAAV   71 (244)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHT-GGGEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-hCcceEEEeecCCHHHHHHHH
Confidence            457999999    99999999999999999999999999886554321       112 1345667777   55555555


Q ss_pred             cCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||...+....    
T Consensus        72 ~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----  147 (244)
T d1nffa_          72 DTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----  147 (244)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc----
Confidence            432     48999999994                    3334    34445555555556899999987654321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|....            +|+++..|.||.+..+....     + .......|         ..-
T Consensus       148 --------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~-----~-~~~~~~~p---------l~R  204 (244)
T d1nffa_         148 --------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW-----V-PEDIFQTA---------LGR  204 (244)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT-----S-CTTCSCCS---------SSS
T ss_pred             --------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh-----h-hHHHHhcc---------ccC
Confidence                    1245665553322            38999999999987653211     0 00001111         122


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..++|+|++++.++.+... .+|+++.+.+|.
T Consensus       205 ~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         205 AAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence            56899999999999876543 568999999875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.52  E-value=6.2e-14  Score=126.25  Aligned_cols=194  Identities=16%  Similarity=0.156  Sum_probs=127.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++.+|+.++...+.       .++ ...+.++.+|   .+++++++
T Consensus         3 L~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~   70 (254)
T d1hdca_           3 LSGKTVIIT----GGARGLGAEAARQAVAAGARVVLADVLDEEGAATA-------REL-GDAARYQHLDVTIEEDWQRVV   70 (254)
T ss_dssp             CCCSEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HTT-GGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-CCceEEEEcccCCHHHHHHHH
Confidence            357899999    99999999999999999999999999886554321       112 1346677777   56666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||...+....    
T Consensus        71 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~----  146 (254)
T d1hdca_          71 AYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA----  146 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc----
Confidence            432     48999999994                    3333    44555555566666999999987654321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|....            +|+++..|.||.+..+         +.........-.... .....-
T Consensus       147 --------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~---------~~~~~~~~~~~~~~~-~~pl~R  208 (254)
T d1hdca_         147 --------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP---------MTAETGIRQGEGNYP-NTPMGR  208 (254)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH---------HHHHHTCCCSTTSCT-TSTTSS
T ss_pred             --------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc---------cchhcCHHHHHHHHh-CCCCCC
Confidence                    1245665553322            3899999999998543         122221111101100 000111


Q ss_pred             e-eeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 I-AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~-v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      + ..++|+|.+++.++.+... .+|+++.+.+|.
T Consensus       209 ~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCc
Confidence            2 3579999999999876543 568999999885

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.52  E-value=2.7e-14  Score=129.07  Aligned_cols=199  Identities=16%  Similarity=0.186  Sum_probs=130.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch-hcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|+.++.+....    .+... ....+..+.+|   ++++.+++
T Consensus         3 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~----~~~~~~~~~~~~~~~~Dvt~~~~v~~~~   74 (258)
T d1iy8a_           3 TDRVVLIT----GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA----AVLETAPDAEVLTTVADVSDEAQVEAYV   74 (258)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhhCCCCeEEEEeccCCCHHHHHHHH
Confidence            46899999    999999999999999999999999998865433211    00011 11245666777   66666655


Q ss_pred             cCC-----cccEEEeCCCC---------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK---------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~---------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +..     ++|++||+||.                     |+.++    +.++..+++.+-.++|++||...+...    
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----  150 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----  150 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----
T ss_pred             HHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----
Confidence            432     48999999994                     33443    444445555555689999997765322    


Q ss_pred             CCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCC-------CCcHHHHHHHHHcCCCcccC
Q 015746          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN-------KDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~-------~~~~~~~~~~~~~~~~~~~~  259 (401)
                              +....|.+.|...            .+|+++..|.||.+..+...       ......+.+.+....|+.. 
T Consensus       151 --------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R-  221 (258)
T d1iy8a_         151 --------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKR-  221 (258)
T ss_dssp             --------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCS-
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCC-
Confidence                    1125566555322            24899999999998654110       0112223344444444433 


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                              +..++|+|.+++.++.+... .+|+++.+.||..
T Consensus       222 --------~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         222 --------YGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             --------CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             --------CcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence                    34789999999999876543 5689999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=1.4e-14  Score=131.03  Aligned_cols=199  Identities=15%  Similarity=0.197  Sum_probs=117.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++++|+.++.++...    ++.. ....+..+.+|   .+++.+++
T Consensus         6 LkgK~alVT----Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~----~~~~-~~~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d1xq1a_           6 LKAKTVLVT----GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLS----KWQK-KGFQVTGSVCDASLRPEREKLM   76 (259)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHH-TTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHh-cCCceEEEeccCCCHHHHHHHH
Confidence            457999999    999999999999999999999999998865543211    0111 11246677777   45554444


Q ss_pred             cC------CcccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCC
Q 015746          149 GG------VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (401)
Q Consensus       149 ~~------~~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~  198 (401)
                      +.      -++|++||+||.                    |+.+    ++.++..+++.+-.++|++||........   
T Consensus        77 ~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~---  153 (259)
T d1xq1a_          77 QTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS---  153 (259)
T ss_dssp             HHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------
T ss_pred             HHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccc---
Confidence            22      138999999994                    3444    44555555666666899999977543221   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       199 ~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                               ....|.+.|....            +|+++..|.||.+..+...........+.+....|+..        
T Consensus       154 ---------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R--------  216 (259)
T d1xq1a_         154 ---------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR--------  216 (259)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------
T ss_pred             ---------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCC--------
Confidence                     1255665553322            38999999999987663222111112222222233322        


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                       +..++|+|.+++.++.+... .+|+++++.+|..
T Consensus       217 -~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         217 -FGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  250 (259)
T ss_dssp             --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             -CcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence             34689999999988875543 5689999998853

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.52  E-value=5.4e-14  Score=127.28  Aligned_cols=196  Identities=14%  Similarity=0.170  Sum_probs=130.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|.+|||    ||++.||+.++++|+++|++|++++|+.+..+++..    .+... ...+..+.+|   .+++.++++
T Consensus         4 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~----~~~~~-g~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T d1zema1           4 NGKVCLVT----GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEA----SVREK-GVEARSYVCDVTSEEAVIGTVD   74 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTT-TSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhc-CCcEEEEEccCCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998765543211    11111 1245677777   555555554


Q ss_pred             CC-----cccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~---------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|++||++|.                     |+.+    ++.++..+++.+-.++|++||...+....    
T Consensus        75 ~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----  150 (260)
T d1zema1          75 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----  150 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----
T ss_pred             HHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc----
Confidence            32     48999999984                     2333    44455555555556899999987654321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCC---------------CCCCcHHHHHHHHHc
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG---------------NNKDCEEWFFDRIVR  252 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~---------------~~~~~~~~~~~~~~~  252 (401)
                              ....|.+.|....            +|+++..|.||.|-.+.               ........+.+.+..
T Consensus       151 --------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T d1zema1         151 --------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG  222 (260)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh
Confidence                    1245665553322            38999999999986541               111122333444555


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                      ..|+..+         ..++|+|.+++.++.+... .+|+++++.||
T Consensus       223 ~~Pl~R~---------g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         223 SVPMRRY---------GDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             TSTTSSC---------BCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCCCCCC---------cCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            5554333         3679999999999876543 56899998875

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.51  E-value=3.3e-14  Score=128.36  Aligned_cols=197  Identities=15%  Similarity=0.139  Sum_probs=128.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.++.+.+.       .++ ..++..+.+|   ++++.++++
T Consensus         4 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-------~~~-~~~~~~~~~Dvt~~~~v~~~~~   71 (256)
T d1k2wa_           4 DGKTALIT----GSARGIGRAFAEAYVREGARVAIADINLEAARATA-------AEI-GPAACAIALDVTDQASIDRCVA   71 (256)
T ss_dssp             TTEEEEEE----TCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-CCceEEEEeeCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999876554321       122 2456677777   566666554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHH----HHh-CCCCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKS-SGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~-~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|++||+||.                    |+.++..+.++    ..+ .+-.++|++||...+....    
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----  147 (256)
T d1k2wa_          72 ELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA----  147 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc----
Confidence            42     48999999994                    34444444443    222 2345899999987653321    


Q ss_pred             CCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCC----------cHHHHHHHHHcCCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVP  257 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~  257 (401)
                              ....|.+.|...            .+|+++..|.||.+-.+.....          ......+.+....|+.
T Consensus       148 --------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  219 (256)
T d1k2wa_         148 --------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFG  219 (256)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTS
T ss_pred             --------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCC
Confidence                    124555555222            2389999999998876631100          0001122222223332


Q ss_pred             cCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       258 ~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      .         +..++|+|.+++.++.+... ..|+++.+.||..++
T Consensus       220 R---------~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         220 R---------MGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             S---------CBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             C---------CcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            2         34789999999998876543 568999999987554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.50  E-value=2.1e-14  Score=129.35  Aligned_cols=196  Identities=17%  Similarity=0.169  Sum_probs=125.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchh-cCCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~~~~~  147 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.+..+.+.+       ++. ..++.++.+|   ++++.++
T Consensus         4 L~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~v~~~   72 (251)
T d1zk4a1           4 LDGKVAIIT----GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-------SVGTPDQIQFFQHDSSDEDGWTKL   72 (251)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHCCTTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HhCCCCcEEEEEccCCCHHHHHHH
Confidence            457999999    999999999999999999999999998765443211       111 1356777787   5555555


Q ss_pred             hcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCC-EEEEecccccccCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVK-QFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~~~  197 (401)
                      ++..     ++|++||+||.                    |+.+    ++.++..+++.+.. ++|++||...+....  
T Consensus        73 ~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~--  150 (251)
T d1zk4a1          73 FDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--  150 (251)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC--
Confidence            4432     48999999994                    3344    44455555666644 799999977643221  


Q ss_pred             CCCCCCCCCCCCChHHHHHH---------HH-----HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCc
Q 015746          198 PHVEGDVVKPDAGHVQVEKY---------IS-----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~---------~~-----e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                ....|.+.|.         ..     .+|+++..|.||.+..+......-...........|+       
T Consensus       151 ----------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl-------  213 (251)
T d1zk4a1         151 ----------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM-------  213 (251)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT-------
T ss_pred             ----------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCC-------
Confidence                      1234554441         12     2478999999999865421110001111111111221       


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        .-+..++|+|.+++.++.+... ..|+++.+.||.
T Consensus       214 --~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         214 --GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECccc
Confidence              1245789999999998876543 568999999873

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.50  E-value=8.2e-14  Score=125.86  Aligned_cols=196  Identities=16%  Similarity=0.188  Sum_probs=128.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .++|+||||    ||++.||+.++++|+++|++|++++|++++.++..       +++..  ..+.++.+|   .+++++
T Consensus         4 L~gK~alIT----Gas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~-------~~~~~~~~~~~~~~~D~s~~~~~~~   72 (258)
T d1ae1a_           4 LKGTTALVT----GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-------EIWREKGLNVEGSVCDLLSRTERDK   72 (258)
T ss_dssp             CTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCCceEEEeecCCHHHHHH
Confidence            467999999    99999999999999999999999999886554321       12222  244566777   455444


Q ss_pred             hh----cCC--cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          147 VV----GGV--TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~----~~~--~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++    +..  .+|++||+++.                    |+.+    ++.++...++.+..++|++||........ 
T Consensus        73 ~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~-  151 (258)
T d1ae1a_          73 LMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP-  151 (258)
T ss_dssp             HHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccc-
Confidence            43    222  37999999994                    2333    34444455555667999999988754321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~  259 (401)
                                 ....|.+.|..         +|   .|+++..|.||.+..+....     ......++.+....|+.. 
T Consensus       152 -----------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR-  219 (258)
T d1ae1a_         152 -----------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGR-  219 (258)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCS-
T ss_pred             -----------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCC-
Confidence                       12455555522         22   38999999999997763211     112233444544444432 


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                              +...+|+|.+++.++.+... .+|+.+.+.+|.
T Consensus       220 --------~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         220 --------AGKPQEVSALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             --------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --------CcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence                    34789999999999976544 568999999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.3e-14  Score=133.78  Aligned_cols=203  Identities=17%  Similarity=0.154  Sum_probs=126.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.++.......-...+.......+..+.+|   ++++.+++
T Consensus        10 L~gKvalIT----Gas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1          10 LQGQVAIVT----GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            468999999    99999999999999999999999999876543221100000111112356677777   55655555


Q ss_pred             cCC-----cccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~----aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+|+.                    |+.++..+.+    .+++.+-.++|.+|+....+.+     
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~-----  160 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP-----  160 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT-----
T ss_pred             HHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccccc-----
Confidence            432     48999999994                    3444444444    3344455578888765433221     


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCCC---cHHHHHHHHHcCCCcccCCCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                              ....|.+.|...         |   +|+++..|.||.+..+.....   ....+.+.+....|+.       
T Consensus       161 --------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plg-------  225 (297)
T d1yxma1         161 --------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK-------  225 (297)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTS-------
T ss_pred             --------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCC-------
Confidence                    124455444222         2   389999999999976632111   1111222222222322       


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                        -+..++|+|.+++.++.+... .+|+++.+.||..
T Consensus       226 --R~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         226 --RIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             --SCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence              244689999999999976543 5689999999863

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.50  E-value=2.5e-14  Score=129.54  Aligned_cols=198  Identities=15%  Similarity=0.165  Sum_probs=126.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC-CcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|+.. ..+++..    .+.......+.++.+|   .+++.+++
T Consensus         3 ~gK~alIT----Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (260)
T d1x1ta1           3 KGKVAVVT----GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA----GLAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHH----HHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CcCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999    99999999999999999999999999753 2221110    1111122356667777   56666655


Q ss_pred             cCC-----cccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||.                    |    +..++.++..+++.+-.++|++||...+....    
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----  150 (260)
T d1x1ta1          75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----  150 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccC----
Confidence            432     48999999994                    2    33455666666766666999999987654321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcH-----------HHHHHHHHcCCCc
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRKRPV  256 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~-----------~~~~~~~~~~~~~  256 (401)
                              ....|.+.|....            +|+++..|.||.+-.+......-           ....+.+....|+
T Consensus       151 --------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  222 (260)
T d1x1ta1         151 --------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS  222 (260)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred             --------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC
Confidence                    1245666653322            38899999999986653211000           0000001111121


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                               .-+..++|+|.+++.++.+... .+|+++++.||-
T Consensus       223 ---------~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         223 ---------LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             ---------CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ---------CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence                     2245799999999998876543 668999999873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.49  E-value=1e-13  Score=125.37  Aligned_cols=196  Identities=15%  Similarity=0.152  Sum_probs=130.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~  146 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++.+|+.++.+++.       .++..  ..+..+.+|   ++++.+
T Consensus         6 L~GK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-------~~~~~~g~~~~~~~~Dv~~~~~v~~   74 (259)
T d2ae2a_           6 LEGCTALVT----GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-------TQWRSKGFKVEASVCDLSSRSERQE   74 (259)
T ss_dssp             CTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCCceEEEeeCCCHHHHHH
Confidence            357899999    99999999999999999999999999876554321       12221  245566777   555554


Q ss_pred             hhcC------CcccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          147 VVGG------VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       147 ~~~~------~~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      +++.      .++|++||+||.                    |+.+    ++.++..+++.+-.++|++||........ 
T Consensus        75 ~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-  153 (259)
T d2ae2a_          75 LMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP-  153 (259)
T ss_dssp             HHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc-
Confidence            4322      248999999994                    3333    44455555666666999999977643221 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCC----CCCcHHHHHHHHHcCCCcccCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGN----NKDCEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~~  260 (401)
                                 ....|.+.|...         |   +|+++..|.||.+..+..    ........++.+....|+..+ 
T Consensus       154 -----------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~-  221 (259)
T d2ae2a_         154 -----------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRM-  221 (259)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSC-
T ss_pred             -----------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCC-
Confidence                       124566555322         2   389999999999865421    000112234455555554333 


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                              ..++|+|.+++.++.+... .+|+++.+.+|-
T Consensus       222 --------g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         222 --------GEPKELAAMVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             --------BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --------cCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence                    3689999999998876543 568999999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.3e-13  Score=123.49  Aligned_cols=194  Identities=12%  Similarity=0.115  Sum_probs=127.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++.+|++++.+.+.+          ..+++....|   .+..+...
T Consensus         4 l~gK~alIT----Gas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~   69 (245)
T d2ag5a1           4 LDGKVIILT----AAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFA   69 (245)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------ccCCceeeeeccccccccccc
Confidence            356899999    999999999999999999999999998866554322          1256666666   33444443


Q ss_pred             cCC-cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEeccccc-ccCCCCCCCCCC
Q 015746          149 GGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEG  202 (401)
Q Consensus       149 ~~~-~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~v-y~~~~~~~~~E~  202 (401)
                      ... ++|++||++|.                    |+.+    ++.++....+.+-.++|++||... ....        
T Consensus        70 ~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~--------  141 (245)
T d2ag5a1          70 NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV--------  141 (245)
T ss_dssp             HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------
T ss_pred             cccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCc--------
Confidence            332 47999999994                    2333    344444445555568999998543 1111        


Q ss_pred             CCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCC-----CcHHHHHHHHHcCCCcccCCCCcce
Q 015746          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                          +....|...|...+            .|+++..|.||.+-.+....     .....+.+.+....|+..       
T Consensus       142 ----~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R-------  210 (245)
T d2ag5a1         142 ----VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR-------  210 (245)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSS-------
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCC-------
Confidence                11245555553222            38999999999997752110     111223344444444432       


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                        +..++|+|+++..++.+... ..|+++.+.+|..
T Consensus       211 --~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         211 --FATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             --CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             --CcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence              44789999999999986554 5689999998853

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.48  E-value=1.5e-13  Score=123.77  Aligned_cols=191  Identities=14%  Similarity=0.133  Sum_probs=125.7

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc----CC
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG----GV  151 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~----~~  151 (401)
                      ++|||    ||++.||+.++++|+++|++|++.+|+.+..+.+.        .+......+...|.+++.++++    .+
T Consensus         2 TAlVT----Gas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~--------~~~~~~~~~dv~~~~~~~~~~~~~~~~~   69 (252)
T d1zmta1           2 TAIVT----NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE--------AFAETYPQLKPMSEQEPAELIEAVTSAY   69 (252)
T ss_dssp             EEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH--------HHHHHCTTSEECCCCSHHHHHHHHHHHH
T ss_pred             EEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------hhhCcEEEeccCCHHHHHHHHHHHHHHc
Confidence            58999    99999999999999999999999999876654321        1111122333445434333332    22


Q ss_pred             -cccEEEeCCCC---------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCC
Q 015746          152 -TFDVVLDNNGK---------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (401)
Q Consensus       152 -~~d~Vv~~a~~---------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~  205 (401)
                       ++|++||+||.                     |    +..++.++..+++.+-.++|++||...+....          
T Consensus        70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~----------  139 (252)
T d1zmta1          70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------  139 (252)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------
T ss_pred             CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc----------
Confidence             47999999883                     2    23344555556666656899999987654321          


Q ss_pred             CCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCC-------cHHHHHHHHHcCCCcccCCCCccee
Q 015746          206 KPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       206 ~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                        ....|.+.|...            .+|+++..|.||.+..+.....       ......+.+.+..|+..+       
T Consensus       140 --~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~-------  210 (252)
T d1zmta1         140 --ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRL-------  210 (252)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSC-------
T ss_pred             --cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCC-------
Confidence              124566555322            2489999999999977643221       112234455554554333       


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                        ..++|+|.+++.++.+... .+|+++.+.||-
T Consensus       211 --g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~  242 (252)
T d1zmta1         211 --GTQKELGELVAFLASGSCDYLTGQVFWLAGGF  242 (252)
T ss_dssp             --BCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             --cCHHHHHHHHHHHhCchhcCCcCCeEEECCCc
Confidence              3689999999999987654 568999999885

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.47  E-value=1.1e-13  Score=125.07  Aligned_cols=194  Identities=20%  Similarity=0.237  Sum_probs=130.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~~~  148 (401)
                      +|.+|||    ||++.||+.++++|+++|++|++.+|+.++.+.+.       .++..  ..+..+.+|   ++++.+++
T Consensus         2 gKValIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-------~~l~~~g~~~~~~~~Dvs~~~~v~~~~   70 (257)
T d2rhca1           2 SEVALVT----GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-------KELREAGVEADGRTCDVRSVPEIEALV   70 (257)
T ss_dssp             CCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEeecCCHHHHHHHH
Confidence            5778999    99999999999999999999999999876554321       12221  245667777   55555554


Q ss_pred             cC----C-cccEEEeCCCC--------------------ChhhHHHHHHHHHh------CCCCEEEEecccccccCCCCC
Q 015746          149 GG----V-TFDVVLDNNGK--------------------NLDAVRPVADWAKS------SGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       149 ~~----~-~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~------~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +.    . ++|++||+||.                    |+.++..+.+++..      .+..++|++||...+....  
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~--  148 (257)
T d2rhca1          71 AAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV--  148 (257)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc--
Confidence            43    2 48999999994                    46677777776543      3445899999977654321  


Q ss_pred             CCCCCCCCCCCCChHHHHHHH---------HH---hCCCeEEEecCeeecCCCC----------CCcHHHHHHHHHcCCC
Q 015746          198 PHVEGDVVKPDAGHVQVEKYI---------SE---NFSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVRKRP  255 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~---------~e---~g~~~~ilRp~~v~G~~~~----------~~~~~~~~~~~~~~~~  255 (401)
                                ....|.+.|..         .|   +|+++..|.||.+-.+...          ........+.+....|
T Consensus       149 ----------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P  218 (257)
T d2rhca1         149 ----------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP  218 (257)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC
Confidence                      12556666533         22   2788999999998554100          0012233445555555


Q ss_pred             cccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       256 ~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..+         ..++|+|++++.++.+... .+|+++.+.||-
T Consensus       219 lgR~---------~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         219 IGRY---------VQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             TSSC---------BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCC---------cCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            4333         4789999999999876543 568999999873

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.47  E-value=7.7e-14  Score=126.22  Aligned_cols=198  Identities=18%  Similarity=0.174  Sum_probs=129.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhc--CCCeEEEcC---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~  145 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.++ .+.+       .+++..  ..+..+.+|   ++++.
T Consensus         5 L~gK~alIT----Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~-------~~~~~~~g~~~~~~~~Dvt~~~~v~   73 (261)
T d1geea_           5 LEGKVVVIT----GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV-------LEEIKKVGGEAIAVKGDVTVESDVI   73 (261)
T ss_dssp             GTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCEEEEEECCTTSHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-------HHHHHhcCCcEEEEEccCCCHHHHH
Confidence            467999999    999999999999999999999999998643 2211       111211  245566777   56666


Q ss_pred             HhhcCC-----cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCC-EEEEecccccccCCC
Q 015746          146 NVVGGV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVK-QFLFISSAGIYKPAD  195 (401)
Q Consensus       146 ~~~~~~-----~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~-~~v~~SS~~vy~~~~  195 (401)
                      ++++..     ++|++||+||.                    |+    ..++.++..+++.+.. ++|++||...+... 
T Consensus        74 ~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~-  152 (261)
T d1geea_          74 NLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-  152 (261)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC-
Confidence            555432     48999999994                    33    3345556666666543 58899997754322 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~  262 (401)
                                 +....|.+.|....            +|+++..|.||.+..+...... -......+....|+..    
T Consensus       153 -----------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R----  217 (261)
T d1geea_         153 -----------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGY----  217 (261)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSS----
T ss_pred             -----------ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCC----
Confidence                       11245665553322            3899999999998765321100 0112333444444433    


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                           +..++|+|++++.++.+... .+|+++.+.+|..+
T Consensus       218 -----~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         218 -----IGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             -----CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -----CCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence                 33689999999998876543 56899999998643

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.45  E-value=4.9e-14  Score=127.58  Aligned_cols=205  Identities=12%  Similarity=0.148  Sum_probs=131.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++++|+.++..+..+    ++......++..+.+|   ++++.++++
T Consensus         8 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   79 (260)
T d1h5qa_           8 VNKTIIVT----GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQ   79 (260)
T ss_dssp             TTEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            47899999    999999999999999999999999999876543211    1111122356777887   666665553


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhH----HHHHHHHHh-CCCCEEEEecccccccCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKS-SGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~----~~ll~aa~~-~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     ++|++||+|+.                    |+.++    +.++..+.+ .+-..++..++...+........
T Consensus        80 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~  159 (260)
T d1h5qa_          80 QIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  159 (260)
T ss_dssp             HHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc
Confidence            32     48999999994                    33333    344444433 34446777777655432211000


Q ss_pred             CCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                           ..+....|.+.|...            .+|+++..|.||.+-.+.... ....+.+.+....|+..++       
T Consensus       160 -----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~R~g-------  226 (260)
T d1h5qa_         160 -----GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPLNRFA-------  226 (260)
T ss_dssp             -----EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTTSSCB-------
T ss_pred             -----cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc-cCHHHHHHHHhcCCCCCCc-------
Confidence                 001224566555322            248999999999987653221 2233455566655554443       


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                        .++|+|.+++.++.+... .+|+++.+.||..
T Consensus       227 --~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         227 --QPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             --CGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             --CHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence              689999999998876544 5689999998863

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=8.8e-15  Score=132.11  Aligned_cols=202  Identities=15%  Similarity=0.156  Sum_probs=125.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      .+|.+|||    ||++.||+.++++|+++|++|++++|+.++.......-.   ......++.++.+|   .+++.++++
T Consensus         2 ~GKvalIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~---~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (254)
T d2gdza1           2 NGKVALVT----GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH---EQFEPQKTLFIQCDVADQQQLRDTFR   74 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---TTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH---HhcCCCcEEEEEeecCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998765433211000   01112346667777   555555554


Q ss_pred             CC-----cccEEEeCCCC------------Ch----hhHHHHHHHHHhCC---CCEEEEecccccccCCCCCCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK------------NL----DAVRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVV  205 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~------------~~----~~~~~ll~aa~~~g---v~~~v~~SS~~vy~~~~~~~~~E~~~~  205 (401)
                      ..     ++|++||+|+.            |+    ..++.++..+++.+   -.++|++||...+.+..          
T Consensus        75 ~~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~----------  144 (254)
T d2gdza1          75 KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA----------  144 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------
T ss_pred             HHHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC----------
Confidence            32     48999999995            33    34445555554442   24799999987653321          


Q ss_pred             CCCCChHHHHH-----H------HHH---hCCCeEEEecCeeecCCCCC-------CcHHHHHHHHHcCCCcccCCCCcc
Q 015746          206 KPDAGHVQVEK-----Y------ISE---NFSNWASFRPQYMIGSGNNK-------DCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       206 ~~~~~~~~~ek-----~------~~e---~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                        ....|.+.|     +      ..|   .|+++..|.||.+-.+....       .....+.+.+....|.        
T Consensus       145 --~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------  214 (254)
T d2gdza1         145 --QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY--------  214 (254)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH--------
T ss_pred             --CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC--------
Confidence              113444433     2      112   37899999999985431000       0000001111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCCCCH
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  303 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~~t~  303 (401)
                       .-+..++|+|++++.+++++. .+|+++.+.+|..+.+
T Consensus       215 -~r~~~pedvA~~v~fL~s~~~-itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         215 -YGILDPPLIANGLITLIEDDA-LNGAIMKITTSKGIHF  251 (254)
T ss_dssp             -HCCBCHHHHHHHHHHHHHCTT-CSSCEEEEETTTEEEE
T ss_pred             -CCCcCHHHHHHHHHHHHcCCC-CCCCEEEECCCCeeec
Confidence             123478999999999998754 6689999999875543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.44  E-value=9.1e-13  Score=119.58  Aligned_cols=200  Identities=17%  Similarity=0.184  Sum_probs=129.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~  147 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++++|+.++.+++.       .++.. ..+.++.+|   ++++.++
T Consensus         4 L~gKvalIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-------~~l~~~~~~~~~~~Dv~~~~~v~~~   72 (268)
T d2bgka1           4 LQDKVAIIT----GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-------NNIGSPDVISFVHCDVTKDEDVRNL   72 (268)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHCCTTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHhcCCCceEEEEccCCCHHHHHHH
Confidence            467999999    99999999999999999999999999876544321       11111 235566677   6666665


Q ss_pred             hcCC-----cccEEEeCCCC----------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK----------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~----------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++..     ++|++||+||.                      |    +..++.++..+++.+-.++|++||...+.....
T Consensus        73 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  152 (268)
T d2bgka1          73 VDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG  152 (268)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc
Confidence            5432     48999999983                      2    334455566666666668999998775533211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCCC--cHHHHHHHHHcCCCcccCCCC
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~  262 (401)
                                 ....|.+.|...            .+|+++..|.||.+..+.....  ......+........ ..+  
T Consensus       153 -----------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~~g--  218 (268)
T d2bgka1         153 -----------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-LKG--  218 (268)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-SCS--
T ss_pred             -----------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc-cCC--
Confidence                       012455444222            2489999999999987643211  111112222211111 111  


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                          .+..++|+|++++.++.+... .+|+++.+.||..
T Consensus       219 ----r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         219 ----TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             ----CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ----CCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence                234789999999999876543 5689999999853

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.44  E-value=3.2e-13  Score=121.74  Aligned_cols=196  Identities=15%  Similarity=0.123  Sum_probs=124.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC-
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~-  150 (401)
                      |.+|||    ||++.||+.++++|+++|++|++.+|++++.+.+..    .+... ...+..+.+|   .+++.++++. 
T Consensus         2 KValIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~----~i~~~-g~~~~~~~~Dv~~~~~v~~~~~~~   72 (255)
T d1gega_           2 KVALVT----GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVAS----EINQA-GGHAVAVKVDVSDRDQVFAAVEQA   72 (255)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHT-TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEc----CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhc-CCcEEEEEeeCCCHHHHHHHHHHH
Confidence            446999    999999999999999999999999998865543211    11111 1245667777   5555554433 


Q ss_pred             ---C-cccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CCEEEEecccccccCCCCCCCCC
Q 015746          151 ---V-TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ---~-~~d~Vv~~a~~--------------------~~~~~~~ll~a----a~~~g-v~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                         . ++|++||+||.                    |+.++..+.++    ..+.+ -.++|++||...+....      
T Consensus        73 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------  146 (255)
T d1gega_          73 RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------  146 (255)
T ss_dssp             HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------
T ss_pred             HHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc------
Confidence               2 48999999994                    34444444443    33443 35799999977653321      


Q ss_pred             CCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCCCC----------CcHHHHHHHHHcCCCcccC
Q 015746          202 GDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~  259 (401)
                            ....|.+.|...            .+|+++..|.||.+-.+....          .........+.+..|+.. 
T Consensus       147 ------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R-  219 (255)
T d1gega_         147 ------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR-  219 (255)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCS-
T ss_pred             ------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCC-
Confidence                  124566555332            248999999999985441000          001112223333333322 


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                              +..++|+|++++.++.+... .+|+++.+.||-.
T Consensus       220 --------~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         220 --------LSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             --------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             --------CcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence                    34789999999998875543 5689999998853

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.43  E-value=2.9e-13  Score=122.72  Aligned_cols=199  Identities=16%  Similarity=0.161  Sum_probs=122.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~~  146 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++.+|+.++.+++..    ++...  ...++..+.+|   .+++.+
T Consensus         3 l~gKvalVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~----~l~~~~~~~~~~~~~~~Dvt~~~~v~~   74 (264)
T d1spxa_           3 FAEKVAIIT----GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQ----QILAAGVSEQNVNSVVADVTTDAGQDE   74 (264)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhcCCCcCceEEEEccCCCHHHHHH
Confidence            357899999    999999999999999999999999998765543211    00000  11246777887   555665


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------Chhh----HHHHHHHHHhCCCCEEEEecc-ccccc
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISS-AGIYK  192 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~----~~~ll~aa~~~gv~~~v~~SS-~~vy~  192 (401)
                      +++..     ++|++||+||.                        |+.+    ++.++..+++.+- ++|.++| .+.+.
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~S~~~~~~  153 (264)
T d1spxa_          75 ILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG-EIVNISSIASGLH  153 (264)
T ss_dssp             HHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCTTSSSS
T ss_pred             HHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC-cceeeeeeccccc
Confidence            55432     48999999983                        2333    3444555555443 4555554 33322


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC--------cHHHHHHHHHc
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVR  252 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~  252 (401)
                      ..            +....|.+.|....            +|+++..|.||.+-.+.....        -.......+..
T Consensus       154 ~~------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  221 (264)
T d1spxa_         154 AT------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE  221 (264)
T ss_dssp             CC------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH
T ss_pred             cC------------CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHh
Confidence            21            11244655553222            389999999999876532110        11112233333


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCC--CcCCCcEEEecCCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP--EAASSNIFNLVSDRA  300 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~~~g~~~~~~~~~~  300 (401)
                      ..|+..         +..++|+|++++.++.++  ...+|+++.+.||..
T Consensus       222 ~~Pl~R---------~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         222 CVPAGV---------MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HCTTSS---------CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cCCCCC---------CcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            344333         336899999999998754  335689999998853

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.43  E-value=4.8e-13  Score=120.61  Aligned_cols=198  Identities=13%  Similarity=0.127  Sum_probs=124.2

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .++|++|||    ||+|  .||+.++++|+++|++|++..|+++......     +.. .......++.+|   ++++++
T Consensus         6 L~gK~alIT----Gas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-----~~~-~~~~~~~~~~~D~~~~~~v~~   75 (256)
T d1ulua_           6 LSGKKALVM----GVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-----KLA-EALGGALLFRADVTQDEELDA   75 (256)
T ss_dssp             CTTCEEEEE----SCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----HHH-HHTTCCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-----Hhh-hccCcccccccccCCHHHHHH
Confidence            457899999    9998  7999999999999999988888753322110     000 111245667777   566666


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~  195 (401)
                      +++..     ++|++||+++.                        |+.+...+.+++...  .-.++|++||........
T Consensus        76 ~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~  155 (256)
T d1ulua_          76 LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP  155 (256)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT
T ss_pred             HHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC
Confidence            55432     48999999984                        233344444444332  113799999977653321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~  262 (401)
                                  ....|.+.|...+            +|+++..|.||.+..+..... ....+.+.+.+..|+..++  
T Consensus       156 ------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~--  221 (256)
T d1ulua_         156 ------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNI--  221 (256)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCC--
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCc--
Confidence                        1245665553322            489999999999877643221 1123445555555543333  


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCC
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~  300 (401)
                             .++|+|++++.++.+... .+|+++.+.+|..
T Consensus       222 -------~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         222 -------TQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             -------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -------CHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence                   689999999999886554 5689999998854

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.43  E-value=1.3e-13  Score=124.14  Aligned_cols=198  Identities=16%  Similarity=0.195  Sum_probs=124.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++.+|+.++.+.+.       .++ .....++.+|   .+++.+++
T Consensus         4 L~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~~~~~~   71 (253)
T d1hxha_           4 LQGKVALVT----GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA-------AEL-GERSMFVRHDVSSEADWTLVM   71 (253)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHH-CTTEEEECCCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-CCCeEEEEeecCCHHHHHHHH
Confidence            457899999    99999999999999999999999999876544321       112 2345566666   55555554


Q ss_pred             cCC-----cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GGV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~~-----~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +..     ++|++||+||.                    |+    ..++.++..+++.+ .++|++||...+....    
T Consensus        72 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~----  146 (253)
T d1hxha_          72 AAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE----  146 (253)
T ss_dssp             HHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT----
T ss_pred             HHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCcc----
Confidence            432     48999999994                    23    33455555565555 5899999977653221    


Q ss_pred             CCCCCCCCCCChHHHHHHH---------HH-----hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKYI---------SE-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~---------~e-----~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                              ....|.+.|..         .|     +++++..|.||.+..+...........+........     ....
T Consensus       147 --------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-----~~~~  213 (253)
T d1hxha_         147 --------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK-----LNRA  213 (253)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTT-----TBTT
T ss_pred             --------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCcc-----cccc
Confidence                    12455555522         22     248899999999865410000000000111111110     0011


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      -.+..++|+|++++.++.+... .+|+++++.+|-
T Consensus       214 gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         214 GRAYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             CCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             CCCCCHHHHHHHHHHHhChhhCCCcCcEEEECccH
Confidence            2356789999999998876543 568999998873

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.41  E-value=1.6e-13  Score=122.70  Aligned_cols=199  Identities=15%  Similarity=0.137  Sum_probs=128.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.++.....       .++ ...+.++.+|   ++++.++++
T Consensus         4 ~gK~alIt----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dls~~~~i~~~~~   71 (241)
T d2a4ka1           4 SGKTILVT----GAASGIGRAALDLFAREGASLVAVDREERLLAEAV-------AAL-EAEAIAVVADVSDPKAVEAVFA   71 (241)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HTC-CSSEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHc-CCceEEEEecCCCHHHHHHHHH
Confidence            57899999    99999999999999999999999999886553321       112 1356677777   666666554


Q ss_pred             CC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCC
Q 015746          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG  202 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~  202 (401)
                      ..     ++|++||+|+.                    |+.+...+.+++...  +-+.++.+|+.+....+..      
T Consensus        72 ~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~------  145 (241)
T d2a4ka1          72 EALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL------  145 (241)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHH------
T ss_pred             HHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCc------
Confidence            33     48999999983                    344444555544332  2234565665443221110      


Q ss_pred             CCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHH
Q 015746          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (401)
Q Consensus       203 ~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  275 (401)
                        ..+..+|.+.+.+.+.       +|+++..|.||.+-.+.... ......+.+.+..|+..         +..++|+|
T Consensus       146 --~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~-~~~~~~~~~~~~~p~~r---------~~~p~dva  213 (241)
T d2a4ka1         146 --AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPLGR---------AGRPEEVA  213 (241)
T ss_dssp             --HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTTCS---------CBCHHHHH
T ss_pred             --cccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh-hhHhHHHHHHhCCCCCC---------CcCHHHHH
Confidence              0012245554443322       37999999999986553221 22344555655555433         33789999


Q ss_pred             HHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          276 SMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       276 ~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      ++++.++.+... .+|+++.+.+|..+
T Consensus       214 ~~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         214 QAALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHhcchhCCCcCceEEeCCCccc
Confidence            999999976543 56899999998643

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.41  E-value=3.3e-13  Score=120.80  Aligned_cols=194  Identities=16%  Similarity=0.161  Sum_probs=125.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC-CCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      +.||||    ||++.||+.++++|+++|++|++.+++. +..+.+.+    .+.. ...++.++.+|   .+++.++++.
T Consensus         2 pV~lIT----Gas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~----~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~   72 (244)
T d1edoa_           2 PVVVVT----GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSK----QIEA-YGGQAITFGGDVSKEADVEAMMKT   72 (244)
T ss_dssp             CEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHH-HTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH----HHHH-cCCcEEEEeCCCCCHHHHHHHHHH
Confidence            368999    9999999999999999999998876544 33322111    1111 11345667777   5555555443


Q ss_pred             C-----cccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCC
Q 015746          151 V-----TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (401)
Q Consensus       151 ~-----~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E  201 (401)
                      .     ++|++||+|+.                    |    +..++.++..+++.+-.++|++||...+....      
T Consensus        73 ~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~------  146 (244)
T d1edoa_          73 AIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI------  146 (244)
T ss_dssp             HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------
T ss_pred             HHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC------
Confidence            2     48999999994                    2    33455556666666666999999987653321      


Q ss_pred             CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeee
Q 015746          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (401)
Q Consensus       202 ~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  269 (401)
                            ....|.+.|....            +|+++..|.||.+-.+.... ....+.+.+....|+..         +.
T Consensus       147 ------~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~R---------~~  210 (244)
T d1edoa_         147 ------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPLGR---------TG  210 (244)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCTTCS---------CB
T ss_pred             ------CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH-hhHHHHHHHHhcCCCCC---------Cc
Confidence                  1245665553322            38999999999986542111 12233444555555433         34


Q ss_pred             eHHHHHHHHHHHh-cCCC-cCCCcEEEecCCC
Q 015746          270 HVRDLSSMLTLAV-ENPE-AASSNIFNLVSDR  299 (401)
Q Consensus       270 ~v~D~a~~~~~~~-~~~~-~~~g~~~~~~~~~  299 (401)
                      .++|+|+++..++ .+.. ..+|+++.+.||-
T Consensus       211 ~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         211 QPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             CHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            7899999999875 4433 3568999999874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.40  E-value=3.9e-13  Score=122.42  Aligned_cols=199  Identities=13%  Similarity=0.103  Sum_probs=125.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~~~  147 (401)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.++.+.+..    .+...  ...++..+.+|   ++++.++
T Consensus         3 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~----~i~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (274)
T d1xhla_           3 SGKSVIIT----GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQ----QILKAGVPAEKINAVVADVTEASGQDDI   74 (274)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHcCCCCcceEEEEeeCCCHHHHHHH
Confidence            47899999    999999999999999999999999998765443211    01111  11245677787   5555555


Q ss_pred             hcCC-----cccEEEeCCCC----------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK----------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~----------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~  196 (401)
                      ++..     ++|++||+||.                      |+    ..++.++..+++.+-.+++++||.+.+.... 
T Consensus        75 ~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~-  153 (274)
T d1xhla_          75 INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS-  153 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT-
T ss_pred             HHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC-
Confidence            4432     47999999983                      22    3344555556666656788888866433221 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCC----C-CcH---HHHHHHHHcCCCc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNN----K-DCE---EWFFDRIVRKRPV  256 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~----~-~~~---~~~~~~~~~~~~~  256 (401)
                                 ....|.+.|...         |   +|+++..|.||.+..+...    . ...   ..++.......|+
T Consensus       154 -----------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl  222 (274)
T d1xhla_         154 -----------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV  222 (274)
T ss_dssp             -----------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT
T ss_pred             -----------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC
Confidence                       124555555322         2   3899999999999765210    0 001   1111111222233


Q ss_pred             ccCCCCcceeeeeeHHHHHHHHHHHhcCC--CcCCCcEEEecCCCC
Q 015746          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENP--EAASSNIFNLVSDRA  300 (401)
Q Consensus       257 ~~~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~~~g~~~~~~~~~~  300 (401)
                      ..         +..++|+|.+++.++..+  ...+|+++.+.||..
T Consensus       223 gR---------~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         223 GH---------CGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             SS---------CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CC---------CcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            22         347899999999988642  335689999999853

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.39  E-value=1.2e-12  Score=120.35  Aligned_cols=200  Identities=15%  Similarity=0.132  Sum_probs=124.9

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ..++|++|||    ||+|.||++++++|+++|++|++++|+.++......    ++.......+.++.+|   .+++.++
T Consensus        22 ~l~gK~alIT----Gas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~----~l~~~~g~~~~~~~~D~~~~~~v~~~   93 (294)
T d1w6ua_          22 SFQGKVAFIT----GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE----QISSQTGNKVHAIQCDVRDPDMVQNT   93 (294)
T ss_dssp             TTTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HHHHhcCCceEEEEecccChHHHHHH
Confidence            4567999999    999999999999999999999999998865433211    1111222456677777   4554443


Q ss_pred             hcC-----CcccEEEeCCCCC--------------------hhhH----HHHHHHHHh-CCCCEEEEecccccccCCCCC
Q 015746          148 VGG-----VTFDVVLDNNGKN--------------------LDAV----RPVADWAKS-SGVKQFLFISSAGIYKPADEP  197 (401)
Q Consensus       148 ~~~-----~~~d~Vv~~a~~~--------------------~~~~----~~ll~aa~~-~gv~~~v~~SS~~vy~~~~~~  197 (401)
                      +..     .++|++||++|..                    ....    ...+..... .+...++.+||......... 
T Consensus        94 ~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~-  172 (294)
T d1w6ua_          94 VSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF-  172 (294)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT-
T ss_pred             hhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc-
Confidence            322     2489999999941                    1222    222222222 23446777777654433211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCCC--CcHHHHHHHHHcCCCcccCCCCc
Q 015746          198 PHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGM  263 (401)
Q Consensus       198 ~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  263 (401)
                                 ...|.+.|...         |   +|+++..|.||.+..+....  .......+......|+..+    
T Consensus       173 -----------~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~----  237 (294)
T d1w6ua_         173 -----------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRL----  237 (294)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSC----
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCC----
Confidence                       13455554322         2   38999999999997653211  1122234555555555433    


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       264 ~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                           ..++|+|.++..++.+... .+|+++.+.||+
T Consensus       238 -----~~pediA~~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         238 -----GTVEELANLAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             -----BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             -----CCHHHHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence                 3689999999999976543 568999999885

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.37  E-value=5.9e-13  Score=121.13  Aligned_cols=201  Identities=17%  Similarity=0.148  Sum_probs=121.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~~  146 (401)
                      .++|++|||    ||++.||+.++++|+++|++|++.+|+.++.+.+..    .+...  ....+..+.+|   ++++.+
T Consensus         3 L~gK~alVT----Gas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~----~l~~~~~~~~~~~~~~~Dvs~~~~v~~   74 (272)
T d1xkqa_           3 FSNKTVIIT----GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQ----IILKSGVSEKQVNSVVADVTTEDGQDQ   74 (272)
T ss_dssp             TTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEe----CcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhcCCCCCceEEEEccCCCHHHHHH
Confidence            357899999    999999999999999999999999998865443211    01111  11246677777   556655


Q ss_pred             hhcCC-----cccEEEeCCCC------------------------ChhhH----HHHHHHHHhCCCCEEEEecccccccC
Q 015746          147 VVGGV-----TFDVVLDNNGK------------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~------------------------~~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      +++..     ++|++||+||.                        |+.++    +.++..+++.+-..++.+||.+....
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~  154 (272)
T d1xkqa_          75 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA  154 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC
T ss_pred             HHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC
Confidence            55432     48999999984                        23333    34444444443334444454443322


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecCCCC----CC-cHHHHHHHH---HcC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSGNN----KD-CEEWFFDRI---VRK  253 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~~~~----~~-~~~~~~~~~---~~~  253 (401)
                      .            +....|.+.|...         |   +|+++..|.||.+-.+...    .. ....+.+..   ...
T Consensus       155 ~------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (272)
T d1xkqa_         155 Q------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC  222 (272)
T ss_dssp             C------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred             C------------CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcC
Confidence            1            1124566555322         2   3899999999998655210    00 111111111   122


Q ss_pred             CCcccCCCCcceeeeeeHHHHHHHHHHHhcCC--CcCCCcEEEecCCCCC
Q 015746          254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP--EAASSNIFNLVSDRAV  301 (401)
Q Consensus       254 ~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~~~g~~~~~~~~~~~  301 (401)
                      .|+..         +..++|+|++++.++.++  ...+|+++.+.||..+
T Consensus       223 ~PlgR---------~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         223 IPIGA---------AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             CTTSS---------CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCC---------CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            22222         347899999999998754  2356899999998644

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.37  E-value=2e-12  Score=116.76  Aligned_cols=197  Identities=17%  Similarity=0.157  Sum_probs=122.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCCCCCcccchhc--CCCeEEEcC---HhhH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEV  144 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~  144 (401)
                      +..+|.||||    ||++.||.+++++|+++|++|++..|+.++ .+.+.       .++..  .++..+.+|   .+++
T Consensus         3 ~L~GK~alIT----Gas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~D~~~~~~v   71 (259)
T d1ja9a_           3 PLAGKVALTT----GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV-------AELKKLGAQGVAIQADISKPSEV   71 (259)
T ss_dssp             TTTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHH-------HHHHHcCCCceEecCCCCCHHHH
Confidence            4568999999    999999999999999999999987765533 22111       11211  256677777   5555


Q ss_pred             HHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEeccc-ccccCCCC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSA-GIYKPADE  196 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~-~vy~~~~~  196 (401)
                      ..+++..     ++|++||++|.                    |+.+...+++++...  .-++++.++|. +.+.... 
T Consensus        72 ~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~-  150 (259)
T d1ja9a_          72 VALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP-  150 (259)
T ss_dssp             HHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC-
T ss_pred             HHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC-
Confidence            5544322     48999999994                    344444444443332  11245555543 3332111 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH---------H---hCCCeEEEecCeeecC------------CCCCCcHHHHHHHHHc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGS------------GNNKDCEEWFFDRIVR  252 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~---------e---~g~~~~ilRp~~v~G~------------~~~~~~~~~~~~~~~~  252 (401)
                                 ....|.+.|...         |   .|+++..|.||++-.+            .........+.+.+..
T Consensus       151 -----------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (259)
T d1ja9a_         151 -----------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN  219 (259)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHh
Confidence                       113455544222         1   3899999999998643            0111123334455555


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..|+..+         ...+|+|++++.++.+... .+|+++.+.+|.
T Consensus       220 ~~pl~R~---------g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         220 MNPLKRI---------GYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             TSTTSSC---------BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCC---------cCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            5555433         4789999999999987654 568999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.36  E-value=8.4e-13  Score=120.33  Aligned_cols=193  Identities=15%  Similarity=0.164  Sum_probs=123.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~  149 (401)
                      ++|+||||    ||++.||+.++++|+++|++|++++|+.++..++.        .-....+..+.+|   .+++.++++
T Consensus         4 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~   71 (276)
T d1bdba_           4 KGEAVLIT----GGASGLGRALVDRFVAEGAKVAVLDKSAERLAELE--------TDHGDNVLGIVGDVRSLEDQKQAAS   71 (276)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHcCCCeeEEecccccHHHHHHHHH
Confidence            46899999    99999999999999999999999999876543221        1112356677777   555555543


Q ss_pred             CC-----cccEEEeCCCC-------------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCC
Q 015746          150 GV-----TFDVVLDNNGK-------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (401)
Q Consensus       150 ~~-----~~d~Vv~~a~~-------------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~  195 (401)
                      ..     ++|++||+||.                         |+.+    ++.++..+++.+ .++|+++|...+... 
T Consensus        72 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~-  149 (276)
T d1bdba_          72 RCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN-  149 (276)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT-
T ss_pred             HHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC-
Confidence            32     47999999983                         1222    344455555554 478888876544221 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHH---------HHh--CCCeEEEecCeeecCCCCCC---------cHHHHHHHHHcCCC
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYI---------SEN--FSNWASFRPQYMIGSGNNKD---------CEEWFFDRIVRKRP  255 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~---------~e~--g~~~~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~~~  255 (401)
                                 +....|.+.|..         .|.  ++++..|.||.|-.+-....         ....+.+.+....|
T Consensus       150 -----------~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  218 (276)
T d1bdba_         150 -----------GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP  218 (276)
T ss_dssp             -----------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC
Confidence                       112456665533         222  58899999999865422110         01112333444444


Q ss_pred             cccCCCCcceeeeeeHHHHHHHHHHHhcC--CCcCCCcEEEecCCC
Q 015746          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDR  299 (401)
Q Consensus       256 ~~~~~~~~~~~~~v~v~D~a~~~~~~~~~--~~~~~g~~~~~~~~~  299 (401)
                      +..++         .++|+|.+++.++..  ....+|+++++.||-
T Consensus       219 lgR~g---------~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         219 IGRMP---------EVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             TSSCC---------CGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             CCCCc---------CHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            43333         679999999888753  334668999999874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.35  E-value=3.2e-12  Score=117.81  Aligned_cols=191  Identities=15%  Similarity=0.132  Sum_probs=119.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCC--CCcccchhcC--CCeEEEcCHhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--FNRFNEIVSA--GGKTVWGDPAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~l~~~--~~~~~~~D~~~~~~~~  148 (401)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|+.+.....+...  .....++...  .......|.++.++++
T Consensus         6 ~gKvalIT----Gas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           6 DGRVVLVT----GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence            47899999    99999999999999999999999988765432211110  0001111111  1233344544444433


Q ss_pred             ----cCC-cccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 ----GGV-TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ----~~~-~~d~Vv~~a~~--------------------~~~----~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                          +.. ++|++||+||.                    |+.    .++.++..+++.+-.++|++||...+....    
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~----  157 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF----  157 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC----
Confidence                322 48999999994                    333    445556666666667999999977543321    


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceee
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                              ....|.+.|....            +|+++..|.||.+-...... ...                   ....
T Consensus       158 --------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~-~~~-------------------~~~~  209 (302)
T d1gz6a_         158 --------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV-MPE-------------------DLVE  209 (302)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG-SCH-------------------HHHH
T ss_pred             --------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc-CcH-------------------hhHh
Confidence                    1255666553322            38999999998763221110 000                   1112


Q ss_pred             eeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      ++.++|+|.+++.++......+|+++.+.+|.
T Consensus       210 ~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~  241 (302)
T d1gz6a_         210 ALKPEYVAPLVLWLCHESCEENGGLFEVGAGW  241 (302)
T ss_dssp             HSCGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred             cCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCc
Confidence            33579999999998876555678999988773

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.31  E-value=2.6e-11  Score=107.63  Aligned_cols=183  Identities=14%  Similarity=0.136  Sum_probs=111.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC--HhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D--~~~~~~~~~~  150 (401)
                      ++|+||||    ||+|.||+.++++|+++|++|.++++.........     .+..+.  .......|  ...+.+.+..
T Consensus         1 egK~vlIT----Gas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVY----GGRGALGSRCVQAFRARNWWVASIDVVENEEASAS-----VIVKMT--DSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEE-----EECCCC--SCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccc-----ceeecc--cCcHHHHHHHHHHHHHHhCC
Confidence            36899999    99999999999999999999999988764322100     000000  00000001  2233344444


Q ss_pred             CcccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCCCCCCC
Q 015746          151 VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKP  207 (401)
Q Consensus       151 ~~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~  207 (401)
                      .++|++||+||.                     |+.+..++..++...  +-.++|++||...+....            
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~------------  137 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------------  137 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc------------
Confidence            468999999983                     344444444444332  124899999987654331            


Q ss_pred             CCChHHHHHHHHH--------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHH
Q 015746          208 DAGHVQVEKYISE--------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (401)
Q Consensus       208 ~~~~~~~ek~~~e--------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  273 (401)
                      ....|.+.|....              .|+++..|.||.+..+         +.+.......         .-.++..+|
T Consensus       138 ~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~---------~~~~~~~~~~---------~~~~~~pe~  199 (236)
T d1dhra_         138 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEAD---------FSSWTPLEF  199 (236)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTSC---------GGGSEEHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC---------cchhhCccch---------hhcCCCHHH
Confidence            1245666553322              2688999999998764         1222222111         123567899


Q ss_pred             HHHHHHHHhcCCCc-CCCcEEEec
Q 015746          274 LSSMLTLAVENPEA-ASSNIFNLV  296 (401)
Q Consensus       274 ~a~~~~~~~~~~~~-~~g~~~~~~  296 (401)
                      +|+.+..++..... .+|.++.+.
T Consensus       200 va~~~~~l~s~~~~~i~G~~i~v~  223 (236)
T d1dhra_         200 LVETFHDWITGNKRPNSGSLIQVV  223 (236)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred             HHHHHHHHhCCCccCCCCCeEEEE
Confidence            99999999876654 556776653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.30  E-value=2.1e-11  Score=110.61  Aligned_cols=197  Identities=16%  Similarity=0.133  Sum_probs=120.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc-ccCCCCCCCcccchh--cCCCeEEEcC---HhhH
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEV  144 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~  144 (401)
                      +.++|++|||    ||++.||+.++++|+++|++|++++|+.++. +.+       ..++.  ...+.++.+|   ++++
T Consensus        15 sL~gK~~lIT----Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~D~~~~~~v   83 (272)
T d1g0oa_          15 SLEGKVALVT----GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV-------VAAIKKNGSDAACVKANVGVVEDI   83 (272)
T ss_dssp             CCTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHH-------HHHHHhhCCceeeEeCCCCCHHHH
Confidence            3567999999    9999999999999999999999998876432 111       01111  1345666777   5555


Q ss_pred             HHhhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEecccccc-cCCCC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIY-KPADE  196 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy-~~~~~  196 (401)
                      .+.++..     ++|++||+++.                    |+.+...+.+++...  .-.++++++|.... +..  
T Consensus        84 ~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~--  161 (272)
T d1g0oa_          84 VRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV--  161 (272)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC--
T ss_pred             HHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc--
Confidence            5554432     47999999994                    344555555544332  12367777765422 111  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCC-----------CCCCcHHHHH-HHHHc
Q 015746          197 PPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG-----------NNKDCEEWFF-DRIVR  252 (401)
Q Consensus       197 ~~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~-----------~~~~~~~~~~-~~~~~  252 (401)
                                +....|.+.|...            .+|+++..|.||.+-.+.           .......... .....
T Consensus       162 ----------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (272)
T d1g0oa_         162 ----------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ  231 (272)
T ss_dssp             ----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH
T ss_pred             ----------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHc
Confidence                      1123455444222            248999999999986431           0000111111 11222


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      ..|+.         -+...+|+|.++..++.+... .+|+++.+.||.
T Consensus       232 ~~Plg---------R~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         232 WSPLR---------RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             SCTTC---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCCCC---------CCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            33332         245789999999999976554 568999999885

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.29  E-value=7.7e-12  Score=112.36  Aligned_cols=193  Identities=15%  Similarity=0.086  Sum_probs=120.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC----HhhHHHh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~~~~~  147 (401)
                      .++|.||||    ||++.||..++++|+++|++|+++.|..++...+.+.    .......++.++..|    .+++.++
T Consensus         3 l~gK~vlIT----Ggs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~   74 (254)
T d1sbya1           3 LTNKNVIFV----AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL----KAINPKVNITFHTYDVTVPVAESKKL   74 (254)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHH----HHHCTTSEEEEEECCTTSCHHHHHHH
T ss_pred             CCCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHH----HhhCCCCCEEEEEeecCCCHHHHHHH
Confidence            357899999    9999999999999999999999999887654322100    001111245566666    2234443


Q ss_pred             hcCC-----cccEEEeCCCC------------ChhhHHHH----HHHHHhC---CCCEEEEecccccccCCCCCCCCCCC
Q 015746          148 VGGV-----TFDVVLDNNGK------------NLDAVRPV----ADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       148 ~~~~-----~~d~Vv~~a~~------------~~~~~~~l----l~aa~~~---gv~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                      ++..     ++|++||+||.            |+.++.++    +..+.+.   ...++|++||...+.+..        
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~--------  146 (254)
T d1sbya1          75 LKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH--------  146 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT--------
T ss_pred             HHHHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC--------
Confidence            3322     48999999994            44444444    4444333   235799999987754321        


Q ss_pred             CCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecCCC---C--CCcHHHHHHHHHcCCCcccCCCCccee
Q 015746          204 VVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN---N--KDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (401)
                          ....|.+.|...            ..|+++..|.||.+..+-.   .  ...... +.....+            +
T Consensus       147 ----~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~------------~  209 (254)
T d1sbya1         147 ----QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR-VAELLLS------------H  209 (254)
T ss_dssp             ----TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT-HHHHHTT------------S
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHH-HHhcccc------------C
Confidence                124566555322            2489999999999986510   0  000000 1111111            1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCC
Q 015746          267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (401)
Q Consensus       267 ~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~  299 (401)
                      .....+++|++++.+++...  +|+++.+.+|+
T Consensus       210 ~~~~~e~va~~~~~~~~~~~--tG~vi~vdgG~  240 (254)
T d1sbya1         210 PTQTSEQCGQNFVKAIEANK--NGAIWKLDLGT  240 (254)
T ss_dssp             CCEEHHHHHHHHHHHHHHCC--TTCEEEEETTE
T ss_pred             CCCCHHHHHHHHHHhhhCCC--CCCEEEECCCE
Confidence            23478999999999887664  47999999874

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.28  E-value=3e-11  Score=108.58  Aligned_cols=198  Identities=12%  Similarity=0.106  Sum_probs=122.0

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhH--
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV--  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~--  144 (401)
                      .++|+||||    ||+|  .||+++++.|+++|++|++.+|+++......     +... ..........|   ..+.  
T Consensus         3 L~gK~~lIT----Gass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~   72 (258)
T d1qsga_           3 LSGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE-----EFAA-QLGSDIVLQCDVAEDASIDT   72 (258)
T ss_dssp             TTTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHH-----HHHH-HTTCCCEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHh-hcCCcceeecccchHHHHHH
Confidence            357999999    9999  7889999999999999999999864332111     0000 01234444444   2222  


Q ss_pred             --HHhhcCC-cccEEEeCCCC-------------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCC
Q 015746          145 --GNVVGGV-TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPA  194 (401)
Q Consensus       145 --~~~~~~~-~~d~Vv~~a~~-------------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~  194 (401)
                        ....... .+|.+||+++.                         ++.....+..++...  +-+.+|++||.......
T Consensus        73 ~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~  152 (258)
T d1qsga_          73 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI  152 (258)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC
Confidence              2233322 47999999884                         123333444444332  22368888987653322


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC-cHHHHHHHHHcCCCcccCCC
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGS  261 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~  261 (401)
                      .            ....|.+.|...+            +|+++..|+||.|..+..... ......+.+....|+..   
T Consensus       153 ~------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R---  217 (258)
T d1qsga_         153 P------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR---  217 (258)
T ss_dssp             T------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS---
T ss_pred             C------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCC---
Confidence            1            1245555553322            379999999999987643321 22233444444444433   


Q ss_pred             CcceeeeeeHHHHHHHHHHHhcCCC-cCCCcEEEecCCCC
Q 015746          262 GMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (401)
Q Consensus       262 ~~~~~~~v~v~D~a~~~~~~~~~~~-~~~g~~~~~~~~~~  300 (401)
                            +..++|+|.++..++.+.. ..+|+++.+.+|..
T Consensus       218 ------~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         218 ------TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             ------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ------CcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence                  3468999999999997654 36789999999854

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.28  E-value=2.3e-11  Score=109.49  Aligned_cols=185  Identities=16%  Similarity=0.161  Sum_probs=117.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~~~~~  147 (401)
                      ...||||    ||+|.||+.++++|+++|+ +|+++.|+..+.+....    ...++..  ..+.++.+|   .+++.++
T Consensus         9 ~gt~lVT----Ggs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~----~~~~l~~~g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           9 TGTVLVT----GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGE----LVAELEALGARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHH----HHHHHHhccccccccccccchHHHHHHh
Confidence            4689999    9999999999999999999 57778887544332111    1122222  346677777   5666666


Q ss_pred             hcCC----cccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCC
Q 015746          148 VGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (401)
Q Consensus       148 ~~~~----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~  203 (401)
                      ++..    .+|.|||+++.                    |+.+..++.++++..+..+||++||....-.....      
T Consensus        81 ~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~------  154 (259)
T d2fr1a1          81 LGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL------  154 (259)
T ss_dssp             HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC------
T ss_pred             hccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCccc------
Confidence            5543    48999999994                    46778888888888877899999998755332211      


Q ss_pred             CCCCCCChHHHHHHHHH---hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHH
Q 015746          204 VVKPDAGHVQVEKYISE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (401)
Q Consensus       204 ~~~~~~~~~~~ek~~~e---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~  280 (401)
                       ..+..+|...+.+..+   .|++++.|.||.+.+++-...    .+...     +...|     ...+..+++++++..
T Consensus       155 -~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~----~~~~~-----~~~~G-----~~~~~~~~~~~~l~~  219 (259)
T d2fr1a1         155 -GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG----PVADR-----FRRHG-----VIEMPPETACRALQN  219 (259)
T ss_dssp             -TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------------CTTTT-----EECBCHHHHHHHHHH
T ss_pred             -HHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccc----hHHHH-----HHhcC-----CCCCCHHHHHHHHHH
Confidence             0011233333333332   489999999998876532111    01111     11111     345689999999999


Q ss_pred             HhcCCCc
Q 015746          281 AVENPEA  287 (401)
Q Consensus       281 ~~~~~~~  287 (401)
                      ++.....
T Consensus       220 ~l~~~~~  226 (259)
T d2fr1a1         220 ALDRAEV  226 (259)
T ss_dssp             HHHTTCS
T ss_pred             HHhCCCc
Confidence            9988765

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=8.2e-12  Score=112.40  Aligned_cols=193  Identities=15%  Similarity=0.095  Sum_probs=115.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc----CCCeEEEcC---HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS----AGGKTVWGD---PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~D---~~~~  144 (401)
                      .++|.||||    ||++.||.+++++|+++|++|++.+|+.++.+.+.       +++..    ..+.++.+|   ++++
T Consensus         8 lk~Kv~lIT----Gas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-------~~l~~~~~~~~~~~~~~Dls~~~~v   76 (257)
T d1xg5a_           8 WRDRLALVT----GASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-------AECKSAGYPGTLIPYRCDLSNEEDI   76 (257)
T ss_dssp             GTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCCceEEEEEccCCCHHHH
Confidence            346899999    99999999999999999999999999876544321       11221    245667777   5666


Q ss_pred             HHhhcCC-----cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCC--CCEEEEecccccccC
Q 015746          145 GNVVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYKP  193 (401)
Q Consensus       145 ~~~~~~~-----~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~g--v~~~v~~SS~~vy~~  193 (401)
                      .++++..     ++|++||+||.                    |+.+    ++.++...++.+  -.++|++||...+..
T Consensus        77 ~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~  156 (257)
T d1xg5a_          77 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  156 (257)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC
Confidence            6555432     48999999994                    2333    344455555544  358999999775432


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHH-----H----HHH-----hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccC
Q 015746          194 ADEPPHVEGDVVKPDAGHVQVEK-----Y----ISE-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP  259 (401)
Q Consensus       194 ~~~~~~~E~~~~~~~~~~~~~ek-----~----~~e-----~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  259 (401)
                      ...          +....|...|     +    ..|     .++++..|.||.+-.+.... ......+......+    
T Consensus       157 ~p~----------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~-~~~~~~~~~~~~~~----  221 (257)
T d1xg5a_         157 LPL----------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK-LHDKDPEKAAATYE----  221 (257)
T ss_dssp             CSC----------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH-HTTTCHHHHHHHHC----
T ss_pred             CCC----------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhh-cChhhHHHHHhcCC----
Confidence            110          0112344433     1    122     37888999998775431000 00000111111111    


Q ss_pred             CCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEe
Q 015746          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  295 (401)
Q Consensus       260 ~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~  295 (401)
                           ...+..++|+|++++.++.++.. ..|++...
T Consensus       222 -----~~r~~~pedvA~~v~fL~s~~a~~itG~i~i~  253 (257)
T d1xg5a_         222 -----QMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMR  253 (257)
T ss_dssp             --------CBCHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred             -----CCCCcCHHHHHHHHHHHhCChhcCeECCEEEE
Confidence                 12345799999999999987764 33465433

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.24  E-value=8.1e-11  Score=104.42  Aligned_cols=184  Identities=15%  Similarity=0.112  Sum_probs=111.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhH----HH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV----GN  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~----~~  146 (401)
                      .|++|||    ||++.||+.++++|+++|++|++.+|+.+..+                 .....+|   ....    ..
T Consensus         1 DK~alIT----Gas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~-----------------~~~~~~d~~~~~~~~~~~~~   59 (241)
T d1uaya_           1 ERSALVT----GGASGLGRAAALALKARGYRVVVLDLRREGED-----------------LIYVEGDVTREEDVRRAVAR   59 (241)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCCSSS-----------------SEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCccccc-----------------ceEeeccccchhhhHHHHHh
Confidence            3789999    99999999999999999999999999876432                 2233344   1111    12


Q ss_pred             hhcCCcccEEEeCCCC------------------------ChhhHHHHHH----HHHh------CCCCEEEEeccccccc
Q 015746          147 VVGGVTFDVVLDNNGK------------------------NLDAVRPVAD----WAKS------SGVKQFLFISSAGIYK  192 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~------------------------~~~~~~~ll~----aa~~------~gv~~~v~~SS~~vy~  192 (401)
                      .......+.+++.++.                        |+.....+..    ...+      .+-.++|++||...+.
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  139 (241)
T d1uaya_          60 AQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE  139 (241)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH
T ss_pred             hhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc
Confidence            2222233555554442                        1222223333    2221      2334899999987654


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCC
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG  260 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  260 (401)
                      ...            ....|.+.|....            +|+++..|.||.+..+..... .......+....++  .+
T Consensus       140 ~~~------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~--~~  204 (241)
T d1uaya_         140 GQI------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-PEKAKASLAAQVPF--PP  204 (241)
T ss_dssp             CCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-CHHHHHHHHTTCCS--SC
T ss_pred             CCC------------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh-hhhHHHHHHhcCCC--CC
Confidence            321            1245665553322            489999999999866522111 12223334443332  11


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCCCC
Q 015746          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (401)
Q Consensus       261 ~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~~~  300 (401)
                            -+..++|+|.+++.+++. ...+|+++.+.||..
T Consensus       205 ------R~g~pedvA~~v~fL~s~-~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         205 ------RLGRPEEYAALVLHILEN-PMLNGEVVRLDGALR  237 (241)
T ss_dssp             ------SCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCC
T ss_pred             ------CCcCHHHHHHHHHHHHhC-CCCCCCEEEECCccc
Confidence                  123689999999999884 445689999998853

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.24  E-value=5.2e-11  Score=105.58  Aligned_cols=181  Identities=12%  Similarity=0.114  Sum_probs=107.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~~  151 (401)
                      .|||||    ||+|.||+.++++|+++|++|++++|+..+.....        ......+.....+   .+.+...++.-
T Consensus         3 gkVlIT----Gas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           3 GKVIVY----GGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN--------ILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEE--------EECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCchhccccc--------ceeccccCchhHHHHHHHHHHHHhcCC
Confidence            579999    99999999999999999999999999875422100        0000000000000   23333344444


Q ss_pred             cccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCCEEEEecccccccCCCCCCCCCCCCCCCC
Q 015746          152 TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (401)
Q Consensus       152 ~~d~Vv~~a~~---------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~  208 (401)
                      ++|++||+||.                     |+.++..+.+++...  +-.++|++||...+.+..            .
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~------------~  138 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP------------S  138 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------T
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc------------c
Confidence            68999999983                     344444444444332  114899999987654332            1


Q ss_pred             CChHHHHHHHHH---------h-----CCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHH
Q 015746          209 AGHVQVEKYISE---------N-----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (401)
Q Consensus       209 ~~~~~~ek~~~e---------~-----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  274 (401)
                      ...|.+.|...+         .     ++++..|.||.+-.+         +.+.......         ...++..+|+
T Consensus       139 ~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---------~~~~~~~~~~---------~~~~~~~~~v  200 (235)
T d1ooea_         139 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---------MNRKWMPNAD---------HSSWTPLSFI  200 (235)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------HHHHHSTTCC---------GGGCBCHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------chhhhCcCCc---------cccCCCHHHH
Confidence            245555553322         1     456777899887433         2333332222         1245689999


Q ss_pred             HHHHHHHhcCCCc--CCCcEEEecC
Q 015746          275 SSMLTLAVENPEA--ASSNIFNLVS  297 (401)
Q Consensus       275 a~~~~~~~~~~~~--~~g~~~~~~~  297 (401)
                      ++.++..+..+..  .+|..+.+.+
T Consensus       201 a~~~~~~l~~~~~~~~tG~~i~v~~  225 (235)
T d1ooea_         201 SEHLLKWTTETSSRPSSGALLKITT  225 (235)
T ss_dssp             HHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHHHHhcCccccCCCceEEEEEe
Confidence            9998876655433  4567777743

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.1e-10  Score=104.30  Aligned_cols=190  Identities=13%  Similarity=0.148  Sum_probs=113.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|.+|||    ||++.||+.++++|+++|++|++++|+.++.+.+.       .++ .........|   .++.+...
T Consensus         3 lkGKvalIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l-~~~~~~~~~~~~~~~~~~~~~   70 (248)
T d2o23a1           3 VKGLVAVIT----GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA-------KKL-GNNCVFAPADVTSEKDVQTAL   70 (248)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHh-CCCcccccccccccccccccc
Confidence            467999999    99999999999999999999999999987654321       111 1233334444   33222222


Q ss_pred             c-----CCcccEEEeCCCC--------------------------ChhhHHHHHHHHHh----C------CCCEEEEecc
Q 015746          149 G-----GVTFDVVLDNNGK--------------------------NLDAVRPVADWAKS----S------GVKQFLFISS  187 (401)
Q Consensus       149 ~-----~~~~d~Vv~~a~~--------------------------~~~~~~~ll~aa~~----~------gv~~~v~~SS  187 (401)
                      .     ....|.++++++.                          |+.++.++.+++..    .      +-.++|++||
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS  150 (248)
T d2o23a1          71 ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  150 (248)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             cccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecc
Confidence            1     1235888877652                          34445555555422    1      2347999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCC
Q 015746          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP  255 (401)
Q Consensus       188 ~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  255 (401)
                      ...+.+..            ....|.+.|...+            +|+++..|.||.+..+.... ....+.+.+....|
T Consensus       151 ~~~~~~~~------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~p  217 (248)
T d2o23a1         151 VAAFEGQV------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVP  217 (248)
T ss_dssp             THHHHCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS
T ss_pred             hhhccCCC------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc-CCHHHHHHHHhcCC
Confidence            88764321            1245665553322            38999999999987653221 11122223333333


Q ss_pred             cccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEe
Q 015746          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (401)
Q Consensus       256 ~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~  295 (401)
                      +  .+      -+..++|+|++++.+++. ...+|+++++
T Consensus       218 l--~~------R~g~peevA~~v~fL~s~-~~itGq~I~v  248 (248)
T d2o23a1         218 F--PS------RLGDPAEYAHLVQAIIEN-PFLNGEVIRL  248 (248)
T ss_dssp             S--SC------SCBCHHHHHHHHHHHHHC-TTCCSCEEEE
T ss_pred             C--CC------CCcCHHHHHHHHHHHHhC-CCCCceEeEC
Confidence            2  11      134789999999988874 3455788765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.24  E-value=2.2e-11  Score=108.37  Aligned_cols=170  Identities=16%  Similarity=0.171  Sum_probs=113.4

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCe-------EEEEecCCCCcccCCCCCCCcccchhc--CCCeEEEcC---Hhh
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHE-------VTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAE  143 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~  143 (401)
                      -||||    ||++.||+.++++|+++|++       |+..+|+.++.+.+.       .++..  ..+.++.+|   .++
T Consensus         3 VvlIT----Gas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~-------~~~~~~g~~~~~~~~Dvt~~~~   71 (240)
T d2bd0a1           3 ILLIT----GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-------LECRAEGALTDTITADISDMAD   71 (240)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-------HHHHTTTCEEEEEECCTTSHHH
T ss_pred             EEEEc----cCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEecCCCHHH
Confidence            47999    99999999999999999987       888888876554321       12221  235566777   555


Q ss_pred             HHHhhcCC-----cccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCCEEEEecccccccCC
Q 015746          144 VGNVVGGV-----TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       144 ~~~~~~~~-----~~d~Vv~~a~~--------------------~----~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      +.++++..     ++|++||+||.                    |    +..++.++..+++.+-.++|++||...+...
T Consensus        72 v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~  151 (240)
T d2bd0a1          72 VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF  151 (240)
T ss_dssp             HHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC
Confidence            55544332     48999999994                    3    3445566666666666689999998765432


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCC
Q 015746          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG  262 (401)
Q Consensus       195 ~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (401)
                      .            ....|.+.|....            .|+++..|.||.+-.+....         +    +    .  
T Consensus       152 ~------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------~----~----~--  200 (240)
T d2bd0a1         152 R------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------V----D----D--  200 (240)
T ss_dssp             T------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------C----C----S--
T ss_pred             C------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------c----C----H--
Confidence            1            1255666653222            38899999999986653211         0    0    0  


Q ss_pred             cceeeeeeHHHHHHHHHHHhcCCCc
Q 015746          263 MQFTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       263 ~~~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      .....+..++|+|++++.++.++..
T Consensus       201 ~~~~~~~~PedvA~~v~~l~s~~~~  225 (240)
T d2bd0a1         201 EMQALMMMPEDIAAPVVQAYLQPSR  225 (240)
T ss_dssp             TTGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             hhHhcCCCHHHHHHHHHHHHcCCcc
Confidence            0011245689999999999987764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.16  E-value=1.9e-10  Score=104.23  Aligned_cols=202  Identities=9%  Similarity=0.054  Sum_probs=117.0

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~  146 (401)
                      .++|++|||    ||+|  .||..++++|+++|++|++++|+++..+..+     .+... .....++..|   .++..+
T Consensus         3 L~gK~alIT----Gaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~-----~l~~~-~~~~~~~~~d~~~~~~~~~   72 (274)
T d2pd4a1           3 LKGKKGLIV----GVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVR-----PIAQE-LNSPYVYELDVSKEEHFKS   72 (274)
T ss_dssp             TTTCEEEEE----CCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHH-----HHHHH-TTCCCEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHhh-CCceeEeeecccchhhHHH
Confidence            357999999    9887  7999999999999999999999854222111     01111 1234455555   333333


Q ss_pred             hh----cCC-cccEEEeCCCCC------------------------hhhHHHHHHHHHhC-CC-CEEEEecccccccCCC
Q 015746          147 VV----GGV-TFDVVLDNNGKN------------------------LDAVRPVADWAKSS-GV-KQFLFISSAGIYKPAD  195 (401)
Q Consensus       147 ~~----~~~-~~d~Vv~~a~~~------------------------~~~~~~ll~aa~~~-gv-~~~v~~SS~~vy~~~~  195 (401)
                      ++    +.. ++|++||+++..                        ......+....... +. ..++.+|+.+......
T Consensus        73 ~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~  152 (274)
T d2pd4a1          73 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA  152 (274)
T ss_dssp             HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT
T ss_pred             HHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccc
Confidence            33    222 489999999841                        11223333333332 22 2466666655543321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH-------hCCCeEEEecCeeecCCCCCCc-HHHHHHHHHcCCCcccCCCCcceee
Q 015746          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTN  267 (401)
Q Consensus       196 ~~~~~E~~~~~~~~~~~~~ek~~~e-------~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  267 (401)
                      ..       ..+..+|.+++.+.+.       .|+++..|.||.+..+...... ...+........+...         
T Consensus       153 ~~-------~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r---------  216 (274)
T d2pd4a1         153 HY-------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRK---------  216 (274)
T ss_dssp             TC-------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS---------
T ss_pred             cc-------hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccC---------
Confidence            10       0011234333333222       3899999999998876432211 1222223333333322         


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       268 ~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      +..++|+|.+++.++.+... .+|+++.+.+|.
T Consensus       217 ~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         217 NVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence            34789999999999986543 568999999986

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.5e-11  Score=109.63  Aligned_cols=175  Identities=12%  Similarity=0.107  Sum_probs=115.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      ..+|.||||    ||++.||++++++|+++|++|++++|+.++.+.+..    ++.. ...++..+.+|   .+++.+++
T Consensus         5 l~Gkv~lIT----Gas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~----~~~~-~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           5 VTGEIVLIT----GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAA----KCKG-LGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHH-TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHh-cCCcEEEEEeeCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998876544321    1111 12356777887   55555544


Q ss_pred             cC----C-cccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GG----V-TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~----~-~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +.    . ++|++||++|.                    |+    ..++.++..+++.+-.++|++||...+...     
T Consensus        76 ~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~-----  150 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----  150 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----
T ss_pred             HHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC-----
Confidence            32    2 48999999994                    33    334555666677777799999998765322     


Q ss_pred             CCCCCCCCCCChHHHHHHH---------HH------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcc
Q 015746          200 VEGDVVKPDAGHVQVEKYI---------SE------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~---------~e------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (401)
                             +....|.+.|..         .|      .|+.++.|.||+|-.+....             ....       
T Consensus       151 -------~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-------------~~~~-------  203 (244)
T d1yb1a_         151 -------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------PSTS-------  203 (244)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------THHH-------
T ss_pred             -------CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-------------cCcc-------
Confidence                   112445555533         22      26889999999875442111             0001       


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ....+.++|+|+.++..+.....
T Consensus       204 ~~~~~~pe~va~~i~~~~~~~~~  226 (244)
T d1yb1a_         204 LGPTLEPEEVVNRLMHGILTEQK  226 (244)
T ss_dssp             HCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             ccCCCCHHHHHHHHHHHHhcCCc
Confidence            11234689999999988877653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=7.4e-11  Score=106.16  Aligned_cols=196  Identities=14%  Similarity=0.109  Sum_probs=119.7

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHh---CCCeEEEEecCCCCcccCCCCCCCcccc-hhcCCCeEEEcC---Hhh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAE  143 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~  143 (401)
                      ...+|.++||    ||++.||+.++++|.+   +|++|++++|+.++.+.+..    ++.. .....+..+.+|   +++
T Consensus         3 ~L~gKvalIT----Gas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~----~l~~~~~~~~~~~~~~Dvs~~~~   74 (259)
T d1oaaa_           3 GLGCAVCVLT----GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKE----ELGAQQPDLKVVLAAADLGTEAG   74 (259)
T ss_dssp             CCBSEEEEES----SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHH----HHHHHCTTSEEEEEECCTTSHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHH----HHHhhcCCceEEEEEccCCCHHH
Confidence            3457889999    9999999999999975   79999999998866543221    0000 011245677777   555


Q ss_pred             HHHhhc---------CCcccEEEeCCCC-----------------------ChhhHHHHHHHHHh----CC--CCEEEEe
Q 015746          144 VGNVVG---------GVTFDVVLDNNGK-----------------------NLDAVRPVADWAKS----SG--VKQFLFI  185 (401)
Q Consensus       144 ~~~~~~---------~~~~d~Vv~~a~~-----------------------~~~~~~~ll~aa~~----~g--v~~~v~~  185 (401)
                      +.++++         ...+|++||++|.                       |+.+...+.+++..    .+  ..++|++
T Consensus        75 v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~i  154 (259)
T d1oaaa_          75 VQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNI  154 (259)
T ss_dssp             HHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEE
T ss_pred             HHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccc
Confidence            555542         1246899999873                       34555555555533    33  2489999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH----------hCCCeEEEecCeeecCCCCC----CcHHHHHHHHH
Q 015746          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNK----DCEEWFFDRIV  251 (401)
Q Consensus       186 SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e----------~g~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~  251 (401)
                      ||...+.+..            ....|.+.|....          .|+++..|.||.+..+....    ...+.....+.
T Consensus       155 sS~~~~~~~~------------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~  222 (259)
T d1oaaa_         155 SSLCALQPYK------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ  222 (259)
T ss_dssp             CCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH
T ss_pred             ccccccCCCc------------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHH
Confidence            9987654321            1255665553322          38899999999986541100    00001111111


Q ss_pred             cCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEe
Q 015746          252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (401)
Q Consensus       252 ~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~  295 (401)
                      ...+.   +      .+..++|+|++++.++++.....|+.+++
T Consensus       223 ~~~~~---~------r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         223 KLKSD---G------ALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHT---T------CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             hcCCC---C------CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            11111   1      13478999999999987665556787775

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=3.2e-10  Score=103.36  Aligned_cols=194  Identities=16%  Similarity=0.129  Sum_probs=114.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec---CCCCcccCCCCCCCcccch--hcCCCeEEEcC---HhhHHH
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV---GDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r---~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~~~~  146 (401)
                      |.||||    ||++.||+.++++|+++|++|+.+.+   +.+....+.+    ....+  ...++..+.+|   .+++.+
T Consensus         3 kVvlIT----GassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~Dv~~~~~~~~   74 (285)
T d1jtva_           3 TVVLIT----GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE----AARALACPPGSLETLQLDVRDSKSVAA   74 (285)
T ss_dssp             EEEEES----CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH----HHHHTTCCTTSEEEEECCTTCHHHHHH
T ss_pred             CEEEEc----cCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHH----HHHHHhccCCceEEEeccccchHhhhh
Confidence            557899    99999999999999999988665544   3322211100    00111  12356677777   666666


Q ss_pred             hhcCC---cccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          147 VVGGV---TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       147 ~~~~~---~~d~Vv~~a~~--------------------~~~~----~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      +++..   .+|++||+++.                    |+.+    ++.++..+++.+-.++|++||...+.+.     
T Consensus        75 ~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~-----  149 (285)
T d1jtva_          75 ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----  149 (285)
T ss_dssp             HHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----
T ss_pred             hhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC-----
Confidence            55443   48999999994                    3444    4455556666676799999998765332     


Q ss_pred             CCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCC--------------cHHHHHHHHHcC
Q 015746          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKD--------------CEEWFFDRIVRK  253 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~--------------~~~~~~~~~~~~  253 (401)
                             +....|.+.|...+            +|++++.|.||.+-.+-....              ....+.+.+...
T Consensus       150 -------~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (285)
T d1jtva_         150 -------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHS  222 (285)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHH
Confidence                   11255666664322            389999999999865421110              001111111111


Q ss_pred             CCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCcCCCcEEEecCC
Q 015746          254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (401)
Q Consensus       254 ~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~g~~~~~~~~  298 (401)
                      +....       .....++|+|++++.+++.+..   +...+.+.
T Consensus       223 ~~~~~-------~~~~~PeeVA~~v~~~~~~~~p---~~ry~~g~  257 (285)
T d1jtva_         223 KQVFR-------EAAQNPEEVAEVFLTALRAPKP---TLRYFTTE  257 (285)
T ss_dssp             HHHHH-------HHCBCHHHHHHHHHHHHHCSSC---CSEEESCS
T ss_pred             hhhhc-------ccCCCHHHHHHHHHHHHhCCCC---CeEEecHH
Confidence            11111       1134689999999999988765   33445543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.11  E-value=6.3e-10  Score=99.24  Aligned_cols=144  Identities=15%  Similarity=0.127  Sum_probs=92.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHh---CCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      ||+||||    ||++.||+.++++|++   +|++|++.+|+.++...+..     .. -...++.++.+|   +++++++
T Consensus         2 MKtilIT----Gas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~Dvs~~~~v~~~   71 (248)
T d1snya_           2 MNSILIT----GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-----LA-KNHSNIHILEIDLRNFDAYDKL   71 (248)
T ss_dssp             CSEEEES----CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-----HH-HHCTTEEEEECCTTCGGGHHHH
T ss_pred             cCEEEEe----CCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----HH-hcCCcEEEEEEEeccHHHHHHH
Confidence            7889999    9999999999999974   69999999999877643211     00 012467788887   4555444


Q ss_pred             hc-------CCcccEEEeCCCC---------------------ChhhH----HHHHHHHHhC-----------CCCEEEE
Q 015746          148 VG-------GVTFDVVLDNNGK---------------------NLDAV----RPVADWAKSS-----------GVKQFLF  184 (401)
Q Consensus       148 ~~-------~~~~d~Vv~~a~~---------------------~~~~~----~~ll~aa~~~-----------gv~~~v~  184 (401)
                      ++       ..++|++||+||.                     |+.+.    +.++..+++.           +..++|.
T Consensus        72 ~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~  151 (248)
T d1snya_          72 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  151 (248)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence            33       2248999999994                     23333    3344444432           3458999


Q ss_pred             ecccccccCCCCCCCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecC
Q 015746          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (401)
Q Consensus       185 ~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~  236 (401)
                      +||....-..  .+       .+...-|...|...            +.|+++..|.||.|-.+
T Consensus       152 i~S~~g~~~~--~~-------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         152 MSSILGSIQG--NT-------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             ECCGGGCSTT--CC-------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             ccccccccCC--CC-------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            9996532111  00       11123566555322            23899999999998654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.11  E-value=2.5e-10  Score=102.05  Aligned_cols=186  Identities=13%  Similarity=0.118  Sum_probs=108.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~  147 (401)
                      .+|+||||    ||++.||..++++|+++|+  .|++..|+.++...+.        +....++.++.+|   .++++++
T Consensus         2 ~~KtilIT----GassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~--------~~~~~~~~~~~~Dvs~~~~v~~~   69 (250)
T d1yo6a1           2 SPGSVVVT----GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK--------SIKDSRVHVLPLTVTCDKSLDTF   69 (250)
T ss_dssp             CCSEEEES----SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH--------TCCCTTEEEEECCTTCHHHHHHH
T ss_pred             cCCEEEEe----CCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH--------HhhCCceEEEEEecCCHHHHHHH
Confidence            45899999    9999999999999999996  6888888887655432        2223467788888   4444433


Q ss_pred             hc-------CCcccEEEeCCCC---------------------ChhhHHHH----HHHHHhC-----------CCCEEEE
Q 015746          148 VG-------GVTFDVVLDNNGK---------------------NLDAVRPV----ADWAKSS-----------GVKQFLF  184 (401)
Q Consensus       148 ~~-------~~~~d~Vv~~a~~---------------------~~~~~~~l----l~aa~~~-----------gv~~~v~  184 (401)
                      ++       ...+|++||+||.                     |+.++..+    +..+++.           ...+++.
T Consensus        70 ~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~  149 (250)
T d1yo6a1          70 VSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVIT  149 (250)
T ss_dssp             HHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEE
T ss_pred             HHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccc
Confidence            32       2237999999994                     33444333    3333332           1136777


Q ss_pred             ecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHc
Q 015746          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR  252 (401)
Q Consensus       185 ~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  252 (401)
                      +|+...+-......    ... ....-|.+.|....            .|+++..|.||.|-.+-..             
T Consensus       150 ~s~~~~~~~~~~~~----~~~-~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-------------  211 (250)
T d1yo6a1         150 ISSGLGSITDNTSG----SAQ-FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-------------  211 (250)
T ss_dssp             ECCGGGCSTTCCST----TSS-SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------
T ss_pred             cccccccccCCccc----ccc-hhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC-------------
Confidence            77755442221110    000 11123665553322            3899999999987433100             


Q ss_pred             CCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       253 ~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                       .           ...+.+++.++.++..+.+... .+|+.|+. .++++
T Consensus       212 -~-----------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~-~g~p~  248 (250)
T d1yo6a1         212 -K-----------NAALTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPY  248 (250)
T ss_dssp             -------------------HHHHHHHHHHHTTCCGGGTTCEEET-TEEEC
T ss_pred             -C-----------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECC-CCeeC
Confidence             0           0124578888888888876554 45677764 34443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.04  E-value=9.7e-10  Score=98.73  Aligned_cols=195  Identities=14%  Similarity=0.119  Sum_probs=112.8

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc-cCCCCCCCcccchhcCCCeEEEcC-------HhhHHHh
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGD-------PAEVGNV  147 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~D-------~~~~~~~  147 (401)
                      .+|||    ||++.||+.++++|+++|++|++++|+.++.. ++..    ++..........+..|       .+.+.++
T Consensus         3 vAlVT----Gas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (266)
T d1mxha_           3 AAVIT----GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVA----ELNAARAGSAVLCKGDLSLSSSLLDCCEDI   74 (266)
T ss_dssp             EEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred             EEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH----HHHhhcCCceEEEecccccchhHHHHHHHH
Confidence            47999    99999999999999999999999999875431 1100    1111111222333322       2333332


Q ss_pred             hc----CC-cccEEEeCCCCCh-------------------------------hhHHHHHHHHHh---------CCCCEE
Q 015746          148 VG----GV-TFDVVLDNNGKNL-------------------------------DAVRPVADWAKS---------SGVKQF  182 (401)
Q Consensus       148 ~~----~~-~~d~Vv~~a~~~~-------------------------------~~~~~ll~aa~~---------~gv~~~  182 (401)
                      ++    .. ++|++||+||...                               ............         .....+
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (266)
T d1mxha_          75 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  154 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccc
Confidence            22    11 3799999999410                               000111111111         112356


Q ss_pred             EEecccccccCCCCCCCCCCCCCCCCCChHHHHHHH-----H-------HhCCCeEEEecCeeecCCCCCCcHHHHHHHH
Q 015746          183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----S-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRI  250 (401)
Q Consensus       183 v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~-----~-------e~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~  250 (401)
                      +.+|+........            ....|.+.|..     +       ..|+++..|.||.+..+....   ..+.+.+
T Consensus       155 ~~~~~~~~~~~~~------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~~~~~~~  219 (266)
T d1mxha_         155 VNLCDAMTDLPLP------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---QETQEEY  219 (266)
T ss_dssp             EEECCGGGGSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---HHHHHHH
T ss_pred             hhhhhccccccCc------------chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---HHHHHHH
Confidence            6666655443321            12344444422     2       248999999999987654322   3344555


Q ss_pred             HcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .+..|+.        +-+..++|+|.+++.++.+... .+|+++.+.||..+
T Consensus       220 ~~~~pl~--------r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         220 RRKVPLG--------QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HTTCTTT--------SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCC--------CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            5554431        1123689999999999987654 56899999988543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.03  E-value=7.6e-10  Score=99.64  Aligned_cols=199  Identities=11%  Similarity=0.053  Sum_probs=113.8

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhH--
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV--  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~--  144 (401)
                      .++|+||||    ||+|  .||++++++|+++|++|++..|+.++..+       +..+........+.+|   .++.  
T Consensus         4 l~gK~~lIt----Gaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~-------~~~~~~~~~~~~~~~dv~~~~~~~~   72 (268)
T d2h7ma1           4 LDGKRILVS----GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ-------RITDRLPAKAPLLELDVQNEEHLAS   72 (268)
T ss_dssp             TTTCEEEEC----CCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH-------HHHTTSSSCCCEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH-------HHHHHcCCceeeEeeeccccccccc
Confidence            457899999    9654  69999999999999999999988754321       1112222355666676   3222  


Q ss_pred             -----HHhhcCC-cccEEEeCCCCC-------------------------hhhHHHHHHHHHhCC-CCEEEEeccccccc
Q 015746          145 -----GNVVGGV-TFDVVLDNNGKN-------------------------LDAVRPVADWAKSSG-VKQFLFISSAGIYK  192 (401)
Q Consensus       145 -----~~~~~~~-~~d~Vv~~a~~~-------------------------~~~~~~ll~aa~~~g-v~~~v~~SS~~vy~  192 (401)
                           .+.+... .+|+++|+++..                         .........++.... ....+.++|...+.
T Consensus        73 ~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~  152 (268)
T d2h7ma1          73 LAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR  152 (268)
T ss_dssp             HHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS
T ss_pred             ccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc
Confidence                 3333332 479999999831                         111222233332221 12344444433332


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCC--------CCCC---cHHHHHHH
Q 015746          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG--------NNKD---CEEWFFDR  249 (401)
Q Consensus       193 ~~~~~~~~E~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~--------~~~~---~~~~~~~~  249 (401)
                      ..            |....|...|...+            .|+++..|.||.+-.+.        ....   ....+.+.
T Consensus       153 ~~------------p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  220 (268)
T d2h7ma1         153 AM------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG  220 (268)
T ss_dssp             CC------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred             cC------------cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHH
Confidence            21            11234554442222            38999999999886531        1100   11122223


Q ss_pred             HHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCC
Q 015746          250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (401)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~  301 (401)
                      .....|+..        -+..++|+|+++..++.+... .+|+++.+.+|...
T Consensus       221 ~~~~~pl~r--------r~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         221 WDQRAPIGW--------NMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHHHCTTCC--------CTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHhcCCCCC--------CCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            333333321        233679999999999976543 56899999998643

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1e-09  Score=99.02  Aligned_cols=177  Identities=15%  Similarity=0.067  Sum_probs=108.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~  148 (401)
                      .++|++|||    ||++.||++++++|+++|++|++++|+.++.+++..    +........+..+..|   .+.....+
T Consensus        12 L~GK~alIT----GassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~   83 (269)
T d1xu9a_          12 LQGKKVIVT----GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFV   83 (269)
T ss_dssp             GTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHH
Confidence            457999999    999999999999999999999999998876543221    0111122234555555   22222222


Q ss_pred             cC-----CcccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCCEEEEecccccccCCCCCCC
Q 015746          149 GG-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (401)
Q Consensus       149 ~~-----~~~d~Vv~~a~~--------------------~~----~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~  199 (401)
                      ..     -.+|+++++++.                    |+    ..++.++..+++.+ .++|++||...+...     
T Consensus        84 ~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~~~~-----  157 (269)
T d1xu9a_          84 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAY-----  157 (269)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCC-----
T ss_pred             HHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhcCCC-----
Confidence            11     136999999884                    22    33445555555444 479999987764332     


Q ss_pred             CCCCCCCCCCChHHHHHHHHH--------------hCCCeEEEecCeeecCCCCCCcHHHHHHHHHcCCCcccCCCCcce
Q 015746          200 VEGDVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (401)
Q Consensus       200 ~E~~~~~~~~~~~~~ek~~~e--------------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (401)
                             +....|.+.|...+              .++++..|.||.|-.+         +......+.+.         
T Consensus       158 -------p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~~~---------  212 (269)
T d1xu9a_         158 -------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGIVH---------  212 (269)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGGGG---------
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCCcc---------
Confidence                   11245665553322              2577888999987442         22333222211         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc
Q 015746          266 TNIAHVRDLSSMLTLAVENPEA  287 (401)
Q Consensus       266 ~~~v~v~D~a~~~~~~~~~~~~  287 (401)
                      ......+++|+.++..+.....
T Consensus       213 ~~~~~~e~~a~~i~~~~~~~~~  234 (269)
T d1xu9a_         213 MQAAPKEECALEIIKGGALRQE  234 (269)
T ss_dssp             GGCBCHHHHHHHHHHHHHTTCS
T ss_pred             ccCCCHHHHHHHHHHHhhcCCC
Confidence            1234678999998887765543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.01  E-value=1.9e-09  Score=97.85  Aligned_cols=201  Identities=11%  Similarity=0.074  Sum_probs=112.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC-cccCCCC-----CCCcc------c--chhcCCCeEEEcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKP-----PFNRF------N--EIVSAGGKTVWGD  140 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~-----~~~~~------~--~l~~~~~~~~~~D  140 (401)
                      ..+|||    ||++.||+.++++|+++|++|++.+|+.++ .+.+...     +....      .  ......+....+|
T Consensus         3 pVAlIT----Gas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d   78 (284)
T d1e7wa_           3 PVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   78 (284)
T ss_dssp             CEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeeccccccccccccccccc
Confidence            457999    999999999999999999999998876532 1111000     00000      0  0000011222233


Q ss_pred             ---HhhHHHhhcCC-----cccEEEeCCCCC----------------------------------hhhHHHHHHHH----
Q 015746          141 ---PAEVGNVVGGV-----TFDVVLDNNGKN----------------------------------LDAVRPVADWA----  174 (401)
Q Consensus       141 ---~~~~~~~~~~~-----~~d~Vv~~a~~~----------------------------------~~~~~~ll~aa----  174 (401)
                         .+++.++++..     ++|++||+||..                                  +.+...+.+++    
T Consensus        79 v~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  158 (284)
T d1e7wa_          79 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  158 (284)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchh
Confidence               45555554321     479999999942                                  01111112221    


Q ss_pred             ------HhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHH------------HhCCCeEEEecCeeecC
Q 015746          175 ------KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (401)
Q Consensus       175 ------~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~------------e~g~~~~ilRp~~v~G~  236 (401)
                            ++.+..++|+++|.....+..            ....|.+.|...            .+|+++..|.||..-..
T Consensus       159 ~~~~~~~~~~~~~ii~~~s~~~~~~~~------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~  226 (284)
T d1e7wa_         159 AGTPAKHRGTNYSIINMVDAMTNQPLL------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  226 (284)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred             hhhHHHhcCCCCcccccccccccCCcc------------ceeeeccccccchhhhHHHHHHhCCcccccccccccccccc
Confidence                  111234688887766543221            124555555222            24899999999964222


Q ss_pred             CCCCCcHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCCCCC
Q 015746          237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (401)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~~~t  302 (401)
                      .   .....+.+......|+  .+      -+..++|+|.+++.++.+... .+|+++.+.||..++
T Consensus       227 ~---~~~~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         227 D---DMPPAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             G---GSCHHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             c---cCCHHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            1   1223445555555443  11      123689999999999876543 568999999987654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.00  E-value=2.4e-09  Score=97.77  Aligned_cols=204  Identities=8%  Similarity=0.030  Sum_probs=113.7

Q ss_pred             cccCeEEEEecCCCccc--cchHHHHHHHHhCCCeEEEEecCCCCc-------------ccCCCC-CCC---cccchhc-
Q 015746           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENS-------------DKMKKP-PFN---RFNEIVS-  131 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~~~r~~~~~-------------~~~~~~-~~~---~~~~l~~-  131 (401)
                      .++|++|||    ||+|  .||+.++++|+++|++|++..|+....             ...... ...   +...+.. 
T Consensus         6 L~gK~alVT----Gass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           6 LRGKRAFIA----GIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CTTCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            457999999    9887  899999999999999999988753110             000000 000   0000000 


Q ss_pred             -CCC-----------eEEEcC---Hhh-HHHhhcCC-cccEEEeCCCC----------------------ChhhHHHHHH
Q 015746          132 -AGG-----------KTVWGD---PAE-VGNVVGGV-TFDVVLDNNGK----------------------NLDAVRPVAD  172 (401)
Q Consensus       132 -~~~-----------~~~~~D---~~~-~~~~~~~~-~~d~Vv~~a~~----------------------~~~~~~~ll~  172 (401)
                       ...           .+...|   .+. ++.+.+.. ++|++||++|.                      |+.+...+..
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence             000           000011   111 12222211 47999999984                      2334444455


Q ss_pred             HHHhCCC--CEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHH-------------HHHHhCCCeEEEecCeeecCC
Q 015746          173 WAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK-------------YISENFSNWASFRPQYMIGSG  237 (401)
Q Consensus       173 aa~~~gv--~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek-------------~~~e~g~~~~ilRp~~v~G~~  237 (401)
                      ++.....  .+.+.+++.+.......           ....|...|             +..++|+++..|.||.+..+.
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~  230 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERIIPG-----------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTT-----------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred             HHHHHhhcCCcceeeeehhhcccccc-----------cccceecccccccccccccchhccccceEEecccccccccchh
Confidence            5544321  24555555443322110           112333333             123358999999999998875


Q ss_pred             CCCC-cHHHHHHHHHcCCCcccCCCCcceeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCCC
Q 015746          238 NNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (401)
Q Consensus       238 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~~  299 (401)
                      .... ....+.+......|+..+         ..++|+|.+++.++.+... .+|+++.+.+|.
T Consensus       231 ~~~~~~~~~~~~~~~~~~PlgR~---------~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         231 AKAIGFIDTMIEYSYNNAPIQKT---------LTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             SSCCSHHHHHHHHHHHHSSSCCC---------BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hhhccCCHHHHHHHHhCCCCCCC---------CCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            4432 333445555555554333         3789999999999976544 568999999874

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.93  E-value=7.3e-09  Score=92.37  Aligned_cols=197  Identities=13%  Similarity=0.083  Sum_probs=102.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC--
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~--  151 (401)
                      ||.||||    ||++.||++++++|+++|++|++++|+..+...          ++..     ..+............  
T Consensus         1 mkVvlIT----Gas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~----------d~~~-----~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           1 MSIIVIS----GCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------DLST-----AEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------CTTS-----HHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECChHHHHH----------HhcC-----HHHHHHHHHHHHHHhCC
Confidence            6788999    999999999999999999999999987643211          1100     000011122222221  


Q ss_pred             cccEEEeCCCCC-------------hhhH----HHHHHHHHhCCCCEEEEecccccccCC-CCCCCCC------------
Q 015746          152 TFDVVLDNNGKN-------------LDAV----RPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVE------------  201 (401)
Q Consensus       152 ~~d~Vv~~a~~~-------------~~~~----~~ll~aa~~~gv~~~v~~SS~~vy~~~-~~~~~~E------------  201 (401)
                      .+|+++++|+..             ..+.    ....+...+........+++....... ...+...            
T Consensus        62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s  141 (257)
T d1fjha_          62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEee
Confidence            379999999852             1222    233334444444455555543322110 0000000            


Q ss_pred             ---CCCCCCCCChHHHHHHHHH------------hCCCeEEEecCeeecCCCCCCcH-HHHHHHHHcC-CCcccCCCCcc
Q 015746          202 ---GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK-RPVPIPGSGMQ  264 (401)
Q Consensus       202 ---~~~~~~~~~~~~~ek~~~e------------~g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~  264 (401)
                         .....+....|.+.|...+            +|+++..|.||.+-.+......- ..+.+.+.+. .|+..      
T Consensus       142 ~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR------  215 (257)
T d1fjha_         142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGR------  215 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTS------
T ss_pred             ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCC------
Confidence               0000001123565553322            38999999999987653211100 0111222221 12222      


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCCc-CCCcEEEecCC
Q 015746          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (401)
Q Consensus       265 ~~~~v~v~D~a~~~~~~~~~~~~-~~g~~~~~~~~  298 (401)
                         +..++|+|.++..++.+... .+|+++.+.||
T Consensus       216 ---~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         216 ---RAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             ---CCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---CcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence               34789999999999876654 66899999887

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.8e-09  Score=96.36  Aligned_cols=106  Identities=17%  Similarity=0.169  Sum_probs=73.9

Q ss_pred             cCeE-EEEecCCCccccchHHHHHHHHhC-CCeEEEEecCCCCcccCCCCCCCcccchh--cCCCeEEEcC---HhhHHH
Q 015746           74 KKKV-LIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (401)
Q Consensus        74 ~~~V-lVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~~~~  146 (401)
                      +|+| |||    ||++.||..++++|+++ |++|++.+|+.++.+...       .++.  ...+.++.+|   .+++.+
T Consensus         2 g~rVAlVT----Gas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dvs~~~sv~~   70 (275)
T d1wmaa1           2 GIHVALVT----GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-------QQLQAEGLSPRFHQLDIDDLQSIRA   70 (275)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-------HHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCeEEEEC----CCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEEecCCHHHHHH
Confidence            4565 899    99999999999999986 899999999987654321       1121  2367788888   444444


Q ss_pred             hhcCC-----cccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCCEEEEeccccc
Q 015746          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGI  190 (401)
Q Consensus       147 ~~~~~-----~~d~Vv~~a~~--------------------~~~~~~~ll~aa~~~--gv~~~v~~SS~~v  190 (401)
                      +++..     ++|++||+||.                    |+.++..+.+++...  .-.++|++||...
T Consensus        71 ~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~  141 (275)
T d1wmaa1          71 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS  141 (275)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             HHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence            33222     48999999994                    455666666655432  1138999999654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.79  E-value=1.7e-08  Score=93.47  Aligned_cols=35  Identities=20%  Similarity=0.199  Sum_probs=30.5

Q ss_pred             cCeEEEEecCCC--ccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           74 KKKVLIVNTNSG--GHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~G--gtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      .|.+|||    |  ++..||+.+++.|.++|.+|++..+..
T Consensus         2 ~kVAlIT----Gaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           2 EDICFIA----GIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             CcEEEEe----CCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            4678999    9  557999999999999999999987654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.45  E-value=3.5e-08  Score=83.96  Aligned_cols=82  Identities=20%  Similarity=0.246  Sum_probs=60.8

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcCHhhHHHhhc
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~~~~~~~  149 (401)
                      ...+|+||||    ||+|.||+.+++.|+++|++|++++|+.++...+..    .+..... .....+..|.+++.+++.
T Consensus        20 ~l~gK~vlIt----GasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~   91 (191)
T d1luaa1          20 SVKGKKAVVL----AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD----SVNKRFKVNVTAAETADDASRAEAVK   91 (191)
T ss_dssp             CCTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHHHHTCCCEEEECCSHHHHHHHTT
T ss_pred             CCCCCEEEEE----CCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHH----HHHhccchhhhhhhcccHHHHHHHhc
Confidence            4567999999    999999999999999999999999999876543221    1111111 112233445888999888


Q ss_pred             CCcccEEEeCCCC
Q 015746          150 GVTFDVVLDNNGK  162 (401)
Q Consensus       150 ~~~~d~Vv~~a~~  162 (401)
                      +.  |+|||++|.
T Consensus        92 ~i--Dilin~Ag~  102 (191)
T d1luaa1          92 GA--HFVFTAGAI  102 (191)
T ss_dssp             TC--SEEEECCCT
T ss_pred             Cc--CeeeecCcc
Confidence            75  999999985

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.11  E-value=4.8e-06  Score=65.82  Aligned_cols=90  Identities=21%  Similarity=0.360  Sum_probs=65.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc-CCCeEEEcC---HhhHHHh-hc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNV-VG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~~~~~-~~  149 (401)
                      |+|+|.    |+ |.+|+.+++.|.++|++|++++.+++....           +.. .+..++.||   ++.+.++ ++
T Consensus         1 M~IvI~----G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~-----------~~~~~~~~vi~Gd~~~~~~l~~~~i~   64 (132)
T d1lssa_           1 MYIIIA----GI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK-----------ASAEIDALVINGDCTKIKTLEDAGIE   64 (132)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------HHHHCSSEEEESCTTSHHHHHHTTTT
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHCCCCcceecCChhhhhh-----------hhhhhhhhhccCcccchhhhhhcChh
Confidence            799999    76 999999999999999999999998865432           211 267889998   5556655 34


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      .  .|+++-+...+ .....+...+++.+.+++|
T Consensus        65 ~--a~~vv~~t~~d-~~N~~~~~~~k~~~~~~iI   95 (132)
T d1lssa_          65 D--ADMYIAVTGKE-EVNLMSSLLAKSYGINKTI   95 (132)
T ss_dssp             T--CSEEEECCSCH-HHHHHHHHHHHHTTCCCEE
T ss_pred             h--hhhhcccCCcH-HHHHHHHHHHHHcCCceEE
Confidence            4  59888876543 3333445567788887666

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.88  E-value=2.9e-05  Score=61.13  Aligned_cols=92  Identities=21%  Similarity=0.274  Sum_probs=69.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~  150 (401)
                      |+++|.    |+ |.+|+.+++.|.++|++|++++.+++....+           ...+..++.+|   ++.+.++ +.+
T Consensus         1 k~~iIi----G~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~-----------~~~~~~~~~gd~~~~~~l~~a~i~~   64 (134)
T d2hmva1           1 KQFAVI----GL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY-----------ASYATHAVIANATEENELLSLGIRN   64 (134)
T ss_dssp             CCEEEE----CC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT-----------TTTCSEEEECCTTCTTHHHHHTGGG
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH-----------HHhCCcceeeecccchhhhccCCcc
Confidence            578999    55 9999999999999999999999988655432           33466777888   6666665 555


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      +  |.||-..+.+......+...++..+..+++-
T Consensus        65 a--~~vi~~~~~~~~~~~~~~~~~~~~~~~~iia   96 (134)
T d2hmva1          65 F--EYVIVAIGANIQASTLTTLLLKELDIPNIWV   96 (134)
T ss_dssp             C--SEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             c--cEEEEEcCchHHhHHHHHHHHHHcCCCcEEe
Confidence            4  9988887766666666666777778776653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.74  E-value=4.8e-05  Score=62.63  Aligned_cols=91  Identities=20%  Similarity=0.137  Sum_probs=62.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      .|+|||.    || |++|+++++.|.++||+|++.+|+.++...+....         ........+   .......+..
T Consensus         2 ~K~Ilii----Ga-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~---------~~~~~~~~~~~~~~~~~~~i~~   67 (182)
T d1e5qa1           2 TKSVLML----GS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------QHSTPISLDVNDDAALDAEVAK   67 (182)
T ss_dssp             CCEEEEE----CC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC---------TTEEEEECCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc---------cccccccccccchhhhHhhhhc
Confidence            5899999    76 99999999999999999999999998765433211         112222222   4556666665


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      .  |.++.+..  ......++..+.+.+. +++
T Consensus        68 ~--~~~i~~~~--~~~~~~~~~~~~~~~~-~~~   95 (182)
T d1e5qa1          68 H--DLVISLIP--YTFHATVIKSAIRQKK-HVV   95 (182)
T ss_dssp             S--SEEEECSC--GGGHHHHHHHHHHHTC-EEE
T ss_pred             c--ceeEeecc--chhhhHHHHHHHhhcc-cee
Confidence            4  88887654  3455566677777665 444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=0.00017  Score=57.42  Aligned_cols=99  Identities=13%  Similarity=0.175  Sum_probs=60.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-C---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc-CHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-H---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D~~~~~~~~  148 (401)
                      |++|-|+    ||||++|+.+++.|+++. +   +++.+..+........         ........... |.+    .+
T Consensus         1 MkkVaIv----GATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~---------~~~~~~~~~~~~~~~----~~   63 (146)
T d1t4ba1           1 MQNVGFI----GWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS---------FGGTTGTLQDAFDLE----AL   63 (146)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG---------GGTCCCBCEETTCHH----HH
T ss_pred             CcEEEEE----CCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc---------ccCCceeeecccchh----hh
Confidence            6799999    999999999999988763 3   5666665543322110         11111111111 222    23


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCC
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~  194 (401)
                      .++  |++|.+++  -.....+...+.+.|.+ .+.++..+.|.-.
T Consensus        64 ~~~--DivF~a~~--~~~s~~~~~~~~~~g~~-~~VID~Ss~fR~~  104 (146)
T d1t4ba1          64 KAL--DIIVTCQG--GDYTNEIYPKLRESGWQ-GYWIDAASSLRMK  104 (146)
T ss_dssp             HTC--SEEEECSC--HHHHHHHHHHHHHTTCC-CEEEECSSTTTTC
T ss_pred             hcC--cEEEEecC--chHHHHhhHHHHhcCCC-eecccCCcccccC
Confidence            454  99999986  56677788888888874 3444444455433

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.38  E-value=0.00012  Score=60.22  Aligned_cols=96  Identities=16%  Similarity=0.171  Sum_probs=62.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .++.+|||+    ||+|-+|...++.+...|.+|+++++++++.+.           +...+.+.+....+.....-...
T Consensus        26 ~~g~~VlI~----ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-----------~~~lGa~~~i~~~~~~~~~~~~~   90 (171)
T d1iz0a2          26 RPGEKVLVQ----AAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-----------PLALGAEEAATYAEVPERAKAWG   90 (171)
T ss_dssp             CTTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-----------HHHTTCSEEEEGGGHHHHHHHTT
T ss_pred             CCCCEEEEE----eccccchhhhhhhhccccccccccccccccccc-----------ccccccceeeehhhhhhhhhccc
Confidence            346789999    999999999999999999999999988765432           22224433322122233344445


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ++|+||++.|.++   ...++.++..|  ++|+++.
T Consensus        91 g~D~v~d~~G~~~---~~~~~~l~~~G--~~v~~G~  121 (171)
T d1iz0a2          91 GLDLVLEVRGKEV---EESLGLLAHGG--RLVYIGA  121 (171)
T ss_dssp             SEEEEEECSCTTH---HHHHTTEEEEE--EEEEC--
T ss_pred             cccccccccchhH---HHHHHHHhcCC--cEEEEeC
Confidence            6899999988543   34445444444  6887653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.38  E-value=4e-05  Score=63.90  Aligned_cols=38  Identities=29%  Similarity=0.475  Sum_probs=35.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      |||.|+    ||+|.+|+.+++.|+++||+|++.+|++++.+
T Consensus         1 Mki~vi----gGaG~iG~alA~~la~~G~~V~l~~R~~e~~~   38 (212)
T d1jaya_           1 MRVALL----GGTGNLGKGLALRLATLGHEIVVGSRREEKAE   38 (212)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred             CEEEEE----eCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            789999    99999999999999999999999999986654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.37  E-value=0.0003  Score=55.90  Aligned_cols=99  Identities=19%  Similarity=0.222  Sum_probs=66.3

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      ||.|+    ||+|.+|+.++..|..+|.  +++.++.++.+...+      .+.+.....-........+..+.++++  
T Consensus         2 Kv~Ii----GA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~------Dl~~~~~~~~~~~~~~~~~~~~~~~~a--   69 (144)
T d1mlda1           2 KVAVL----GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA------DLSHIETRATVKGYLGPEQLPDCLKGC--   69 (144)
T ss_dssp             EEEEE----TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH------HHTTSSSSCEEEEEESGGGHHHHHTTC--
T ss_pred             eEEEE----CCCChHHHHHHHHHHhCCccceEEEEeccccchhhH------HHhhhhhhcCCCeEEcCCChHHHhCCC--
Confidence            79999    9999999999999999885  688888755332211      011110000011112356677778887  


Q ss_pred             cEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEec
Q 015746          154 DVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       154 d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      |+||-++|.              |....+.+++.+++.+.+-++.+-
T Consensus        70 DivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          70 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            999999983              567788899999988766444443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.36  E-value=0.00017  Score=58.58  Aligned_cols=105  Identities=16%  Similarity=0.172  Sum_probs=69.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCC---cccchh-cCCCeE-EEcCHhhHHHhh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIV-SAGGKT-VWGDPAEVGNVV  148 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~l~-~~~~~~-~~~D~~~~~~~~  148 (401)
                      |++|-++     |.|.+|..++++|+++||+|.+.+|+.++.+.+......   ...+.. ..++-+ ...+.+..+.++
T Consensus         1 M~kIg~I-----GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~   75 (162)
T d3cuma2           1 MKQIAFI-----GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLY   75 (162)
T ss_dssp             CCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHH
T ss_pred             CCEEEEE-----EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHH
Confidence            6789999     799999999999999999999999987654433221111   111111 111111 122344444443


Q ss_pred             cCC--------cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          149 GGV--------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       149 ~~~--------~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      ...        +=++||++.......+..+.+.+++.|+ +|+-
T Consensus        76 ~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi-~~~d  118 (162)
T d3cuma2          76 LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL-AMLD  118 (162)
T ss_dssp             HSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred             hccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCC-cEEe
Confidence            321        1278899999999999999999999987 5664

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.33  E-value=0.00012  Score=60.82  Aligned_cols=103  Identities=17%  Similarity=0.198  Sum_probs=70.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE--EEcC---HhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT--VWGD---PAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~D---~~~~~~  146 (401)
                      .++.+|||+    ||+|.+|...++.....|.+|+++++++++.+.++           ..+...  ...|   .+.+.+
T Consensus        28 ~~G~~VlV~----ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-----------~~Ga~~vi~~~~~~~~~~~~~   92 (182)
T d1v3va2          28 KGGETVLVS----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-----------QIGFDAAFNYKTVNSLEEALK   92 (182)
T ss_dssp             CSSCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTCSEEEETTSCSCHHHHHH
T ss_pred             CCCCEEEEE----eCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-----------hhhhhhhcccccccHHHHHHH
Confidence            346899999    99999999999999999999999998876543222           123322  2223   334445


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      .....++|+|+++.|.  ......++.++..|  +++.++....|+.
T Consensus        93 ~~~~~Gvd~v~D~vG~--~~~~~~~~~l~~~G--~~v~~G~~~~~~~  135 (182)
T d1v3va2          93 KASPDGYDCYFDNVGG--EFLNTVLSQMKDFG--KIAICGAISVYNR  135 (182)
T ss_dssp             HHCTTCEEEEEESSCH--HHHHHHGGGEEEEE--EEEECCCGGGTTC
T ss_pred             HhhcCCCceeEEecCc--hhhhhhhhhccCCC--eEEeecceeeccc
Confidence            5566679999999873  44455566555555  6887776666544

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.29  E-value=0.00013  Score=60.41  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=67.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEE-E-cC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-W-GD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~D---~~~~~~~  147 (401)
                      ++.+|||+    ||+|.+|...++.+...|.+|+++++++++.+.+++           .+.+.+ . .|   .+.+.+.
T Consensus        25 ~g~~VlI~----ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-----------~Ga~~vi~~~~~~~~~~v~~~   89 (183)
T d1pqwa_          25 PGERVLIH----SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-----------LGVEYVGDSRSVDFADEILEL   89 (183)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-----------TCCSEEEETTCSTHHHHHHHH
T ss_pred             CCCEEEEE----CCCCCcccccchhhccccccceeeeccccccccccc-----------ccccccccCCccCHHHHHHHH
Confidence            45799999    999999999999999999999999987765443222           233322 2 22   3445555


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ..+.++|+|+++.+.  ......++.++..|  ++|.++...
T Consensus        90 t~~~g~d~v~d~~g~--~~~~~~~~~l~~~G--~~v~~G~~~  127 (183)
T d1pqwa_          90 TDGYGVDVVLNSLAG--EAIQRGVQILAPGG--RFIELGKKD  127 (183)
T ss_dssp             TTTCCEEEEEECCCT--HHHHHHHHTEEEEE--EEEECSCGG
T ss_pred             hCCCCEEEEEecccc--hHHHHHHHHhcCCC--EEEEEccCC
Confidence            556679999999984  34455566555544  788876443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.27  E-value=0.00088  Score=53.45  Aligned_cols=39  Identities=31%  Similarity=0.457  Sum_probs=35.4

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      ..++||.|+    ||.|.+|+.+++.|.++||+|++.+|+...
T Consensus         7 ~~~~kI~iI----Gg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           7 SDIHKIVIV----GGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             TTCCCEEEE----TTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCeEEEE----cCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            457899999    999999999999999999999999987743

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.24  E-value=0.00026  Score=57.37  Aligned_cols=103  Identities=20%  Similarity=0.198  Sum_probs=67.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCc---ccc-hhcCCCeEEEc-CHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNE-IVSAGGKTVWG-DPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~-l~~~~~~~~~~-D~~~~~~~~~  149 (401)
                      |||-|.     |.|.+|+.+++.|+++||+|++.+|++++.+.+.......   ..+ ....++-+.-. |.+.+..++.
T Consensus         1 MkIgiI-----GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~   75 (161)
T d1vpda2           1 MKVGFI-----GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVAL   75 (161)
T ss_dssp             CEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CEEEEE-----ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHh
Confidence            689999     7899999999999999999999999886654432211111   111 11122222222 4555655542


Q ss_pred             CC--------cccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          150 GV--------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       150 ~~--------~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +.        +-+.||++........+.+.+.+++.|+ +||
T Consensus        76 ~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~-~~v  116 (161)
T d1vpda2          76 GENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGV-EML  116 (161)
T ss_dssp             STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             CCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC-cee
Confidence            11        1267888888888888888888888876 465

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00033  Score=57.47  Aligned_cols=95  Identities=12%  Similarity=0.197  Sum_probs=65.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc-C---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D---~~~~~~~  147 (401)
                      ++.+|||+    ||+|-+|...++.+...|.+|+++++++++.+..           ...+.+ ++.. |   .+.+.+.
T Consensus        28 ~g~~VlV~----Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-----------~~~Ga~~vi~~~~~~~~~~i~~~   92 (174)
T d1yb5a2          28 AGESVLVH----GASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-----------LQNGAHEVFNHREVNYIDKIKKY   92 (174)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCSEEEETTSTTHHHHHHHH
T ss_pred             CCCEEEEE----eccccccccccccccccCcccccccccccccccc-----------cccCcccccccccccHHHHhhhh
Confidence            46789999    9999999999999999999999999877544321           122332 2222 2   3444555


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ..+.++|+|+++.+.  ......++.++..|  ++|.++
T Consensus        93 t~~~g~d~v~d~~g~--~~~~~~~~~l~~~G--~iv~~G  127 (174)
T d1yb5a2          93 VGEKGIDIIIEMLAN--VNLSKDLSLLSHGG--RVIVVG  127 (174)
T ss_dssp             HCTTCEEEEEESCHH--HHHHHHHHHEEEEE--EEEECC
T ss_pred             hccCCceEEeecccH--HHHHHHHhccCCCC--EEEEEe
Confidence            566679999999873  34555566665554  688765

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00046  Score=55.82  Aligned_cols=86  Identities=16%  Similarity=0.084  Sum_probs=54.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |||+|+    |+ |.+|..++..|.+.||+|++++|+......+.....    ............+.    ..+..  +|
T Consensus         1 MkI~Ii----Ga-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~--~D   65 (167)
T d1ks9a2           1 MKITVL----GC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVET----DGSIFNESLTANDP----DFLAT--SD   65 (167)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECT----TSCEEEEEEEESCH----HHHHT--CS
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccC----Cccccccccccchh----hhhcc--cc
Confidence            799999    76 999999999999999999999998865543221100    00000011111123    23344  49


Q ss_pred             EEEeCCCCChhhHHHHHHHHHhC
Q 015746          155 VVLDNNGKNLDAVRPVADWAKSS  177 (401)
Q Consensus       155 ~Vv~~a~~~~~~~~~ll~aa~~~  177 (401)
                      +||.+.-  -..+..+++.++..
T Consensus        66 ~iii~vk--a~~~~~~~~~l~~~   86 (167)
T d1ks9a2          66 LLLVTLK--AWQVSDAVKSLAST   86 (167)
T ss_dssp             EEEECSC--GGGHHHHHHHHHTT
T ss_pred             eEEEeec--ccchHHHHHhhccc
Confidence            9998755  34566666666554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.16  E-value=0.00013  Score=60.21  Aligned_cols=100  Identities=19%  Similarity=0.217  Sum_probs=65.2

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeE-EEcC--HhhHHHh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD--PAEVGNV  147 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D--~~~~~~~  147 (401)
                      .....+|||+    ||+|.+|...++-+...|.+|+++++++++.+..+.           .+.+. +..+  .++....
T Consensus        29 ~~~g~~VLI~----gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-----------lGa~~vi~~~~~~~~~~~~   93 (176)
T d1xa0a2          29 TPERGPVLVT----GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-----------LGAKEVLAREDVMAERIRP   93 (176)
T ss_dssp             CGGGCCEEES----STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-----------TTCSEEEECC---------
T ss_pred             CCCCCEEEEE----eccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-----------cccceeeecchhHHHHHHH
Confidence            3446789999    999999999999999999999999998877643221           12222 2222  2233334


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ..+.++|+|+++.+..  .....++.++..|  |+|.++...
T Consensus        94 ~~~~gvD~vid~vgg~--~~~~~l~~l~~~G--riv~~G~~~  131 (176)
T d1xa0a2          94 LDKQRWAAAVDPVGGR--TLATVLSRMRYGG--AVAVSGLTG  131 (176)
T ss_dssp             CCSCCEEEEEECSTTT--THHHHHHTEEEEE--EEEECSCCS
T ss_pred             hhccCcCEEEEcCCch--hHHHHHHHhCCCc--eEEEeeccc
Confidence            4555799999998743  3444555555544  788777643

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.01  E-value=0.00051  Score=55.70  Aligned_cols=79  Identities=16%  Similarity=0.187  Sum_probs=54.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcCHhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~~~~~~~~~~~~~  153 (401)
                      |||.|.     |.|.+|+.+++.|.++||+|++++|+++..+...           ..++ .....+.    +.++++  
T Consensus         1 MkI~iI-----G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-----------~~~~~~~~~~~~----~~~~~~--   58 (165)
T d2f1ka2           1 MKIGVV-----GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-----------ERQLVDEAGQDL----SLLQTA--   58 (165)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTSCSEEESCG----GGGTTC--
T ss_pred             CEEEEE-----eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-----------Hhhccceeeeec----cccccc--
Confidence            789999     5699999999999999999999999875443211           1121 2222222    245555  


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhC
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSS  177 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~  177 (401)
                      |+||-+.  ....+..+++.....
T Consensus        59 DiIilav--p~~~~~~vl~~l~~~   80 (165)
T d2f1ka2          59 KIIFLCT--PIQLILPTLEKLIPH   80 (165)
T ss_dssp             SEEEECS--CHHHHHHHHHHHGGG
T ss_pred             ccccccC--cHhhhhhhhhhhhhh
Confidence            9998755  366777788877664

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.00  E-value=0.00036  Score=55.59  Aligned_cols=100  Identities=20%  Similarity=0.335  Sum_probs=67.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccc--hhcCCCeEEEcCHhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~D~~~~~~~~  148 (401)
                      ..|||.|+    |+ |++|..++..|+.+|  .+|+.+++++++......    .+.+  .......+..+|.++    +
T Consensus         4 ~~~KI~II----Ga-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~----Dl~~a~~~~~~~~~~~~d~~~----~   70 (146)
T d1ez4a1           4 NHQKVVLV----GD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDAL----DLEDAQAFTAPKKIYSGEYSD----C   70 (146)
T ss_dssp             TBCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH----HHHGGGGGSCCCEEEECCGGG----G
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHH----HHhccccccCCceEeeccHHH----h
Confidence            35799999    85 999999999999987  589999987754322110    0000  111234555666543    4


Q ss_pred             cCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .++  |+||.++|.              |....+.+++.+.+.+.+-++.+-|
T Consensus        71 ~~a--divvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          71 KDA--DLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             TTC--SEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ccc--cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            565  999999884              4566778888888887664554433

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=9.5e-05  Score=62.06  Aligned_cols=106  Identities=20%  Similarity=0.277  Sum_probs=70.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcC------------------CC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA------------------GG  134 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~------------------~~  134 (401)
                      +.++|.|+    |+ |.+|+.|+..++..||+|++++++++..+.....-...+..+...                  ++
T Consensus         3 ~IkkvaVi----Ga-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i   77 (192)
T d1f0ya2           3 IVKHVTVI----GG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTI   77 (192)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred             eeEEEEEE----Cc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhc
Confidence            45799999    55 999999999999999999999998864332111000001111000                  11


Q ss_pred             eEEEcCHhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       135 ~~~~~D~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      ..    ..++..++.++  |.|+.+...++..-+.++....+.-.+.-|+.|+..
T Consensus        78 ~~----~~d~~~a~~~a--d~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS  126 (192)
T d1f0ya2          78 AT----STDAASVVHST--DLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTS  126 (192)
T ss_dssp             EE----ESCHHHHTTSC--SEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred             cc----cchhHhhhccc--ceehhhcccchhHHHHHHHHHhhhcccCceeeccCc
Confidence            11    23455667776  999999999999999999988776444456666533

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.96  E-value=0.0048  Score=48.74  Aligned_cols=92  Identities=16%  Similarity=0.155  Sum_probs=55.3

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC-C---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEE-EcCHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-H---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~~~~~~~~~  149 (401)
                      |||-|+    |||||+|+.+++.|+++. |   ++..++.+...... .        .......... .-|.+    .+.
T Consensus         1 mKVaIi----GATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~--------~~~~~~~~~~~~~~~~----~~~   63 (147)
T d1mb4a1           1 MRVGLV----GWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P--------NFGKDAGMLHDAFDIE----SLK   63 (147)
T ss_dssp             CEEEEE----SCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C--------CSSSCCCBCEETTCHH----HHT
T ss_pred             CEEEEE----CCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c--------ccCCcceeeecccchh----hhc
Confidence            689999    999999999999998753 3   45555433322111 1        0110111111 11222    245


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCC-EEEEecc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~-~~v~~SS  187 (401)
                      ++  |+||.+..  -.....+...+.+.|.+ .+|=.|+
T Consensus        64 ~~--DvvF~alp--~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          64 QL--DAVITCQG--GSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             TC--SEEEECSC--HHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             cc--cEEEEecC--chHHHHHhHHHHHcCCceEEEeCCc
Confidence            54  99999886  45566778888888875 4555665

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.94  E-value=0.00022  Score=58.88  Aligned_cols=101  Identities=16%  Similarity=0.101  Sum_probs=63.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~~~~  150 (401)
                      .|+|.|.    | .|.+|..++..|.++||+|.+++|+++..+.+......   ....++.......   ..++.+.+.+
T Consensus         1 sk~iaIi----G-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~~   72 (184)
T d1bg6a2           1 SKTYAVL----G-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI---IAEGPGLAGTAHPDLLTSDIGLAVKD   72 (184)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE---EEESSSCCEEECCSEEESCHHHHHTT
T ss_pred             CCEEEEE----C-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCC---chhhhhhhhhhhhhhhhhhhHhHhcC
Confidence            3799999    5 59999999999999999999999987554432211100   0000111111111   3456777887


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEEEec
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v~~S  186 (401)
                      +  |+||-+..  ......+++.++.. .-..+|.++
T Consensus        73 a--D~iii~v~--~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          73 A--DVILIVVP--AIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             C--SEEEECSC--GGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             C--CEEEEEEc--hhHHHHHHHHhhhccCCCCEEEEe
Confidence            6  99998753  55677888877765 323455444

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.86  E-value=0.0025  Score=50.31  Aligned_cols=93  Identities=16%  Similarity=0.199  Sum_probs=56.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .|+|-|+    ||||++|+.+++.|.+++|   ++..+.........+        ...   .-+....+.+.  ..+.+
T Consensus         2 ~mnVaIv----GATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i--------~~~---~~~~~~~~~~~--~~~~~   64 (144)
T d2hjsa1           2 PLNVAVV----GATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--------GFA---ESSLRVGDVDS--FDFSS   64 (144)
T ss_dssp             CCCEEEE----TTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--------EET---TEEEECEEGGG--CCGGG
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce--------eec---cccchhccchh--hhhcc
Confidence            4899999    9999999999999987765   566655443322211        110   11111111111  12233


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                        .|++|.+++  -.....+...+.+.|. ++|=.|+.
T Consensus        65 --~d~vf~a~p--~~~s~~~~~~~~~~g~-~VID~Ss~   97 (144)
T d2hjsa1          65 --VGLAFFAAA--AEVSRAHAERARAAGC-SVIDLSGA   97 (144)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTC-EEEETTCT
T ss_pred             --ceEEEecCC--cchhhhhccccccCCc-eEEeechh
Confidence              499988876  4556667777777886 57777763

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.002  Score=46.71  Aligned_cols=88  Identities=17%  Similarity=0.249  Sum_probs=60.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|+|.    |. |-.|..+++.|.++|++|++.+........         ..+ ..++.+..+..+  ...+.+ 
T Consensus         3 ~~~K~v~Vi----Gl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~---------~~~-~~~~~~~~~~~~--~~~~~~-   64 (93)
T d2jfga1           3 YQGKNVVII----GL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL---------DKL-PEAVERHTGSLN--DEWLMA-   64 (93)
T ss_dssp             CTTCCEEEE----CC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG---------GGS-CTTSCEEESBCC--HHHHHH-
T ss_pred             cCCCEEEEE----eE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH---------HHH-hhccceeecccc--hhhhcc-
Confidence            457899999    55 788999999999999999999976542211         111 124455544321  122344 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                       +|.||-..|+...  ..++..|++.|++
T Consensus        65 -~d~vi~SPGi~~~--~~~~~~a~~~gi~   90 (93)
T d2jfga1          65 -ADLIVASPGIALA--HPSLSAAADAGIE   90 (93)
T ss_dssp             -CSEEEECTTSCTT--SHHHHHHHHTTCE
T ss_pred             -CCEEEECCCCCCC--CHHHHHHHHcCCC
Confidence             3999999887544  4688889999884

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.84  E-value=0.0011  Score=54.54  Aligned_cols=101  Identities=18%  Similarity=0.150  Sum_probs=56.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEe-cCCCCc-ccCCCCCCCcccchhc-CCCeEEEcCHhhHHHhhc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENS-DKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~-r~~~~~-~~~~~~~~~~~~~l~~-~~~~~~~~D~~~~~~~~~  149 (401)
                      |+||.|+    |||||+|+.+++.|..+ ..++..+. +..+.. .+...   ..+..+.. .......  .++......
T Consensus         1 MikVaIi----GATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~   71 (179)
T d2g17a1           1 MLNTLIV----GASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLIS---DLHPQLKGIVDLPLQP--MSDVRDFSA   71 (179)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHH---HHCGGGTTTCCCBEEE--ESCGGGTCT
T ss_pred             CcEEEEE----CcccHHHHHHHHHHHhCCCCceEeeEeeccccccccccc---cccccccccccccccc--chhhhhhhc
Confidence            7899999    99999999999999997 45666554 322211 11000   00011110 0111111  122222233


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +  +|+||.+..  -.....++....+.++ ++|=.|+.
T Consensus        72 ~--~dvvf~alp--~~~s~~~~~~~~~~~~-~vIDlSad  105 (179)
T d2g17a1          72 D--VDVVFLATA--HEVSHDLAPQFLQAGC-VVFDLSGA  105 (179)
T ss_dssp             T--CCEEEECSC--HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             c--cceeecccc--chhHHHHhhhhhhcCc-eeeccccc
Confidence            3  599998876  3445556666777776 57777763

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.74  E-value=0.00053  Score=54.47  Aligned_cols=100  Identities=15%  Similarity=0.182  Sum_probs=62.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCC--cccCCCCCCCcccch---hcCCCeEEEcCHhhHHHh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDEN--SDKMKKPPFNRFNEI---VSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~--~~~~~~~~~~~~~~l---~~~~~~~~~~D~~~~~~~  147 (401)
                      |||.|+    ||+|.+|+.++..|+.+|  .++..+++.+..  ......    .+.+.   ...+.++.....++. +.
T Consensus         1 MKV~Ii----GA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~----Dl~~~~~~~~~~~~~~~~~~~d~-~~   71 (145)
T d1hyea1           1 MKVTII----GASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLRE----DIYDALAGTRSDANIYVESDENL-RI   71 (145)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHH----HHHHHHTTSCCCCEEEEEETTCG-GG
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccc----cchhcccccccCCccccCCcchH-HH
Confidence            789999    999999999999999998  489998887522  111000    01111   112333322211222 35


Q ss_pred             hcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEe
Q 015746          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                      ++++  |+||-+||.              |....+.+++.+.+.+-+.++.+
T Consensus        72 l~~a--DvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          72 IDES--DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             GTTC--SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             hccc--eEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            5666  999999984              45567777777777765555544

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.00046  Score=56.75  Aligned_cols=96  Identities=14%  Similarity=0.202  Sum_probs=66.0

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D---~~~~~~~  147 (401)
                      ++.+|||+    ||+|.+|..+++.+...|.+|+++++++++.+.++        .   .+.+ ++. .|   .+.+.++
T Consensus        28 ~g~~Vlv~----ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~--------~---lGa~~vi~~~~~d~~~~v~~~   92 (179)
T d1qora2          28 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL--------K---AGAWQVINYREEDLVERLKEI   92 (179)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH--------H---HTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----ccccccchHHHHHHHHhCCeEeecccchHHHHHHH--------h---cCCeEEEECCCCCHHHHHHHH
Confidence            35799999    99999999999999999999999999987654322        1   1332 332 22   3445555


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      -.+..+|+|+++.+..  .....++.++..|  +++.++.
T Consensus        93 t~g~g~d~v~d~~g~~--~~~~~~~~l~~~G--~~v~~g~  128 (179)
T d1qora2          93 TGGKKVRVVYDSVGRD--TWERSLDCLQRRG--LMVSFGN  128 (179)
T ss_dssp             TTTCCEEEEEECSCGG--GHHHHHHTEEEEE--EEEECCC
T ss_pred             hCCCCeEEEEeCccHH--HHHHHHHHHhcCC--eeeeccc
Confidence            5566789999998743  3445555555544  5765543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.00024  Score=58.70  Aligned_cols=96  Identities=15%  Similarity=0.180  Sum_probs=63.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-cCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~~~~~~~~~~  152 (401)
                      ..+|||+    ||+|.+|...++.+...|++|+++++++++.+.++        .+   +.+.+. -+..+..+.+....
T Consensus        32 ~~~vlV~----gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~--------~l---Gad~vi~~~~~~~~~~l~~~~   96 (177)
T d1o89a2          32 DGEIVVT----GASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK--------SL---GASRVLPRDEFAESRPLEKQV   96 (177)
T ss_dssp             GCEEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH--------HH---TEEEEEEGGGSSSCCSSCCCC
T ss_pred             CCcEEEE----EccccchHHHHHHHHHcCCCeEEEecchhHHHHHH--------hh---ccccccccccHHHHHHHHhhc
Confidence            4589999    99999999999999999999999999887654321        11   333222 22333334455556


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      +|.||++.+..  .....++.++..|  ++|.++..
T Consensus        97 ~~~vvD~Vgg~--~~~~~l~~l~~~G--riv~~G~~  128 (177)
T d1o89a2          97 WAGAIDTVGDK--VLAKVLAQMNYGG--CVAACGLA  128 (177)
T ss_dssp             EEEEEESSCHH--HHHHHHHTEEEEE--EEEECCCT
T ss_pred             CCeeEEEcchH--HHHHHHHHhcccc--ceEeeccc
Confidence            89999987732  2334444444433  78877654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.71  E-value=0.0019  Score=50.01  Aligned_cols=71  Identities=24%  Similarity=0.272  Sum_probs=53.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      |||.|+    |++|-+|+.|++.+.++|+++.+.. ++..                                ..+..  +
T Consensus         1 mki~i~----G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--------------------------------~~~~~--~   42 (128)
T d1vm6a3           1 MKYGIV----GYSGRMGQEIQKVFSEKGHELVLKVDVNGV--------------------------------EELDS--P   42 (128)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEEETTEE--------------------------------EECSC--C
T ss_pred             CEEEEE----CCCCHHHHHHHHHHhcCCCeEEEEECCCcH--------------------------------HHhcc--C
Confidence            689999    9999999999999999999876532 1110                                01123  5


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      |+||++..  ...+...++.|.+.++. +|.-+
T Consensus        43 DVvIDFS~--p~~~~~~l~~~~~~~~p-~ViGT   72 (128)
T d1vm6a3          43 DVVIDFSS--PEALPKTVDLCKKYRAG-LVLGT   72 (128)
T ss_dssp             SEEEECSC--GGGHHHHHHHHHHHTCE-EEECC
T ss_pred             CEEEEecC--HHHHHHHHHHHHhcCCC-EEEEc
Confidence            99999976  68889999999999974 65333

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.71  E-value=0.00064  Score=54.94  Aligned_cols=89  Identities=22%  Similarity=0.295  Sum_probs=63.1

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ...+++|||+    |+ |-+|+.+++.|...|. +|++..|+.++...+..          ..+..+  .+.+++.+.+.
T Consensus        21 ~l~~~~ilvi----Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~----------~~~~~~--~~~~~~~~~l~   83 (159)
T d1gpja2          21 SLHDKTVLVV----GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR----------DLGGEA--VRFDELVDHLA   83 (159)
T ss_dssp             CCTTCEEEEE----SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----------HHTCEE--CCGGGHHHHHH
T ss_pred             CcccCeEEEE----CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH----------hhhccc--ccchhHHHHhc
Confidence            3467899999    76 9999999999999998 69999998766543211          113332  35678888888


Q ss_pred             CCcccEEEeCCCCC--hhhHHHHHHHHHhCC
Q 015746          150 GVTFDVVLDNNGKN--LDAVRPVADWAKSSG  178 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~--~~~~~~ll~aa~~~g  178 (401)
                      .+  |+||.+.+.+  +.....+-..++...
T Consensus        84 ~~--Divi~atss~~~ii~~~~i~~~~~~r~  112 (159)
T d1gpja2          84 RS--DVVVSATAAPHPVIHVDDVREALRKRD  112 (159)
T ss_dssp             TC--SEEEECCSSSSCCBCHHHHHHHHHHCS
T ss_pred             cC--CEEEEecCCCCccccHhhhHHHHHhcc
Confidence            76  9999998743  444555555665543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.70  E-value=0.0004  Score=58.56  Aligned_cols=38  Identities=29%  Similarity=0.332  Sum_probs=33.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      |||.|.     |.||+|..++..|+++||+|++++.+.+..+.
T Consensus         1 MkI~Vi-----GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           1 MRISIF-----GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             CEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CEEEEE-----CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            789999     89999999999999999999999987755443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.003  Score=50.29  Aligned_cols=94  Identities=15%  Similarity=0.220  Sum_probs=63.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~  150 (401)
                      .+|+|.    | -|-+|+.+++.|.++|++|+++..+++....       ........++.++.||   ++.+.++ ++.
T Consensus         4 nHiII~----G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~-------~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~   71 (153)
T d1id1a_           4 DHFIVC----G-HSILAINTILQLNQRGQNVTVISNLPEDDIK-------QLEQRLGDNADVIPGDSNDSSVLKKAGIDR   71 (153)
T ss_dssp             SCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHH-------HHHHHHCTTCEEEESCTTSHHHHHHHTTTT
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHcCCCEEEEeccchhHHH-------HHHHhhcCCcEEEEccCcchHHHHHhcccc
Confidence            479999    5 5899999999999999999999987753221       2233444589999998   5555555 333


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhC-CCCEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~-gv~~~v  183 (401)
                        .++||-+...+ .....++..+++. +..++|
T Consensus        72 --a~~vi~~~~~d-~~n~~~~~~~r~~~~~~~ii  102 (153)
T d1id1a_          72 --CRAILALSDND-ADNAFVVLSAKDMSSDVKTV  102 (153)
T ss_dssp             --CSEEEECSSCH-HHHHHHHHHHHHHTSSSCEE
T ss_pred             --CCEEEEccccH-HHHHHHHHHHHHhCCCCceE
Confidence              59999887654 3334444556664 333444

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.61  E-value=0.0004  Score=57.73  Aligned_cols=105  Identities=14%  Similarity=0.212  Sum_probs=66.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHH-------
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGN-------  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~-------  146 (401)
                      .++|-|+    |+ |.+|+.++..++..|++|++++++++..+.....-...+......+ .   .+......       
T Consensus         4 I~~vaVi----Ga-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~-~---~~~~~~~~~~~~i~~   74 (186)
T d1wdka3           4 VKQAAVL----GA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKG-R---MTPAKMAEVLNGIRP   74 (186)
T ss_dssp             CSSEEEE----CC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTT-S---SCHHHHHHHHHHEEE
T ss_pred             CCEEEEE----Cc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhccc-c---cchhhhhhhhceeec
Confidence            5789999    65 9999999999999999999999987543321100000011110000 0   01111111       


Q ss_pred             -----hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          147 -----VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       147 -----~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                           .+.+  .|.|+.+...++..-+.+.....+.-.+..|+.|+..
T Consensus        75 ~~~~~~~~~--adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnTS  120 (186)
T d1wdka3          75 TLSYGDFGN--VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTS  120 (186)
T ss_dssp             ESSSTTGGG--CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred             ccccccccc--cceeeeeecchHHHHHHHHHHHHhhcCCCeeEEeccc
Confidence                 1233  4999999999999999999988887544555555533

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.59  E-value=0.00049  Score=56.12  Aligned_cols=95  Identities=19%  Similarity=0.217  Sum_probs=62.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhH-HHh---h
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV-GNV---V  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~-~~~---~  148 (401)
                      .+..|||+    ||+|-+|...++.....|++|+++++++++.+.+           ...+.+.+. |.++. .+.   .
T Consensus        23 ~~~~VLV~----gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-----------~~lGad~vi-~~~~~~~~~~~~~   86 (167)
T d1tt7a2          23 EKGSVLVT----GATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-----------KQLGASEVI-SREDVYDGTLKAL   86 (167)
T ss_dssp             GGCCEEEE----STTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-----------HHHTCSEEE-EHHHHCSSCCCSS
T ss_pred             CCCEEEEe----CCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-----------HhhcccceE-eccchhchhhhcc
Confidence            34579999    9999999999999999999999999998776432           222444332 32221 111   2


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .+.++|+|+++.+-  ......++.++..|  ++|.++.
T Consensus        87 ~~~gvd~vid~vgg--~~~~~~~~~l~~~G--~iv~~G~  121 (167)
T d1tt7a2          87 SKQQWQGAVDPVGG--KQLASLLSKIQYGG--SVAVSGL  121 (167)
T ss_dssp             CCCCEEEEEESCCT--HHHHHHHTTEEEEE--EEEECCC
T ss_pred             cCCCceEEEecCcH--HHHHHHHHHhccCc--eEEEeec
Confidence            23358999998773  23334455554444  6776654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0039  Score=50.18  Aligned_cols=97  Identities=14%  Similarity=0.150  Sum_probs=60.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ..+||.|.    |++|.+|+.+++.+++. +.++++.. |.....-...   ...+......++.+.    +++..++..
T Consensus         3 s~ikI~i~----Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d---~~~~~~~~~~~~~~~----~~~~~~~~~   71 (162)
T d1diha1           3 ANIRVAIA----GAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSD---AGELAGAGKTGVTVQ----SSLDAVKDD   71 (162)
T ss_dssp             CBEEEEET----TTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCC---TTCSSSSSCCSCCEE----SCSTTTTTS
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccch---hhhhhccccCCceee----ccHHHHhcc
Confidence            46899999    99999999999999886 56665543 3332211000   001111111122222    233445555


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEe
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                        +|+||++.-  -..+...+++|.+.+++ +|.=
T Consensus        72 --~DViIDFs~--p~~~~~~~~~a~~~~~~-~ViG  101 (162)
T d1diha1          72 --FDVFIDFTR--PEGTLNHLAFCRQHGKG-MVIG  101 (162)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTCE-EEEC
T ss_pred             --cceEEEecc--HHHHHHHHHHHHhccce-eEEe
Confidence              499999965  68888999999999974 6533

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.43  E-value=0.0043  Score=50.59  Aligned_cols=104  Identities=17%  Similarity=0.226  Sum_probs=60.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC--------Ccccchhc--CCCeEEE-c--C
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF--------NRFNEIVS--AGGKTVW-G--D  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~l~~--~~~~~~~-~--D  140 (401)
                      +.+|-|+     |.|.+|..+++.|+++||+|++.+|++++.+.+.+...        ....++..  .....+. .  +
T Consensus         2 ~~nIg~I-----GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~   76 (176)
T d2pgda2           2 QADIALI-----GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKA   76 (176)
T ss_dssp             CBSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCT
T ss_pred             CCcEEEE-----eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCc
Confidence            3578899     78999999999999999999999999876544321110        00010000  0111111 1  1


Q ss_pred             HhhHH----HhhcCCc-ccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          141 PAEVG----NVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       141 ~~~~~----~~~~~~~-~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      .+.+.    .++...+ =++||++.......++.+.+.+++.|+ +|+
T Consensus        77 ~~~v~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~-~~l  123 (176)
T d2pgda2          77 GQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGI-LFV  123 (176)
T ss_dssp             THHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             hHHHHHHHHHHHhccccCcEEEecCcchhHHHHHHHHHHHhcCC-cee
Confidence            11111    1221111 267777777777777777777777776 344

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.40  E-value=0.0011  Score=46.35  Aligned_cols=41  Identities=12%  Similarity=0.227  Sum_probs=36.3

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      .+.++|||+    ||+|-+|...++.+...|++|+++++++++.+
T Consensus        30 ~~~~~vlI~----gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~   70 (77)
T d1o8ca2          30 PQDGEIVVT----GASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (77)
T ss_dssp             GGGCEEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             cCCCcEEEE----eCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            356789999    99999999999999999999999999886543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.39  E-value=0.012  Score=44.09  Aligned_cols=94  Identities=18%  Similarity=0.107  Sum_probs=63.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+++|||+     |.|-+|..-++.|++.|.+|++++........         ......++++.....+.  ..+.+.
T Consensus        10 l~~k~vlVv-----G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~---------~~~~~~~i~~~~~~~~~--~dl~~~   73 (113)
T d1pjqa1          10 LRDRDCLIV-----GGGDVAERKARLLLEAGARLTVNALTFIPQFT---------VWANEGMLTLVEGPFDE--TLLDSC   73 (113)
T ss_dssp             CBTCEEEEE-----CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHH---------HHHTTTSCEEEESSCCG--GGGTTC
T ss_pred             eCCCEEEEE-----CCCHHHHHHHHHHHHCCCeEEEEeccCChHHH---------HHHhcCCceeeccCCCH--HHhCCC
Confidence            357899999     78899999999999999999998765532110         11222356666655321  234554


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                        +.|+.+. .+-.....+...|++.|+  +|.+.
T Consensus        74 --~lv~~at-~d~~~n~~i~~~a~~~~i--lVNv~  103 (113)
T d1pjqa1          74 --WLAIAAT-DDDTVNQRVSDAAESRRI--FCNVV  103 (113)
T ss_dssp             --SEEEECC-SCHHHHHHHHHHHHHTTC--EEEET
T ss_pred             --cEEeecC-CCHHHHHHHHHHHHHcCC--EEEeC
Confidence              7777654 345556688899999986  66654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.37  E-value=0.0027  Score=51.95  Aligned_cols=102  Identities=19%  Similarity=0.257  Sum_probs=62.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC-Ccc----c----------chhcCCC-eEEE
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRF----N----------EIVSAGG-KTVW  138 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~----~----------~l~~~~~-~~~~  138 (401)
                      |||-|+     |.|.+|..++++|+++||+|++.+|++++.+.+.+... ..+    .          .+..... ..+.
T Consensus         2 MkIGvI-----GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVV-----GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             BSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred             CEEEEE-----eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEee
Confidence            689999     89999999999999999999999998866543321100 000    0          0000011 1111


Q ss_pred             cCH-------hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          139 GDP-------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       139 ~D~-------~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      .+.       ..+...+..-  ++++++........+.+.+.+.+.++ +|+-
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~--~iii~~st~~~~~~~~~~~~l~~~~~-~~ld  126 (178)
T d1pgja2          77 QAGAATDSTIEQLKKVFEKG--DILVDTGNAHFKDQGRRAQQLEAAGL-RFLG  126 (178)
T ss_dssp             CCSHHHHHHHHHHHHHCCTT--CEEEECCCCCHHHHHHHHHHHHTTTC-EEEE
T ss_pred             cCcchhhhhhhhhhhhcccc--ceecccCccchhHHHHHHHHHhhcce-eEec
Confidence            111       1222222222  68888888888888888888877776 4553

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.33  E-value=0.0043  Score=50.13  Aligned_cols=95  Identities=17%  Similarity=0.256  Sum_probs=61.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEcC-----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD-----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D-----~~~~~~  146 (401)
                      .+.+|+|+    | .|-||...+..+...|.+|+++++++++.+..+           .-+.. .+..|     ..+..+
T Consensus        26 ~g~~vlV~----G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-----------~~ga~~~~~~~~~~~~~~~~~~   89 (170)
T d1e3ja2          26 LGTTVLVI----G-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-----------NCGADVTLVVDPAKEEESSIIE   89 (170)
T ss_dssp             TTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----------HTTCSEEEECCTTTSCHHHHHH
T ss_pred             CCCEEEEE----c-ccccchhhHhhHhhhcccccccchHHHHHHHHH-----------HcCCcEEEeccccccccchhhh
Confidence            45789999    7 688999999999999999999999886543211           11222 12222     233333


Q ss_pred             hhc---CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          147 VVG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       147 ~~~---~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      .+.   +.++|+||++.|.. ......++.++..|  ++++++
T Consensus        90 ~~~~~~g~g~D~vid~~g~~-~~~~~a~~~~~~~G--~iv~~G  129 (170)
T d1e3ja2          90 RIRSAIGDLPNVTIDCSGNE-KCITIGINITRTGG--TLMLVG  129 (170)
T ss_dssp             HHHHHSSSCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECS
T ss_pred             hhhcccccCCceeeecCCCh-HHHHHHHHHHhcCC--ceEEEe
Confidence            222   34589999998852 33445566666655  688766

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.31  E-value=0.004  Score=51.04  Aligned_cols=95  Identities=16%  Similarity=0.249  Sum_probs=62.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEEc---CH----hh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG---DP----AE  143 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~---D~----~~  143 (401)
                      .+.+|||+    |+ |-||...+..+...|. +|+++++++++.+..+           .-+.+ ++..   |.    +.
T Consensus        28 ~G~~VlV~----Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-----------~lGa~~vi~~~~~~~~~~~~~   91 (182)
T d1vj0a2          28 AGKTVVIQ----GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-----------EIGADLTLNRRETSVEERRKA   91 (182)
T ss_dssp             BTCEEEEE----CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-----------HTTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----CC-Cccchhheecccccccccccccccccccccccc-----------cccceEEEeccccchHHHHHH
Confidence            45789999    86 8899999999999997 7999999886543211           11332 2211   22    22


Q ss_pred             HHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +.+...+.++|+||++.|.. ......++.++..|  ++++++
T Consensus        92 i~~~~~~~g~Dvvid~vG~~-~~~~~a~~~l~~~G--~iv~~G  131 (182)
T d1vj0a2          92 IMDITHGRGADFILEATGDS-RALLEGSELLRRGG--FYSVAG  131 (182)
T ss_dssp             HHHHTTTSCEEEEEECSSCT-THHHHHHHHEEEEE--EEEECC
T ss_pred             HHHhhCCCCceEEeecCCch-hHHHHHHHHhcCCC--EEEEEe
Confidence            34444455689999998853 33445566665554  677766

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.0072  Score=51.30  Aligned_cols=61  Identities=18%  Similarity=0.103  Sum_probs=41.8

Q ss_pred             ccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-Hhh----HHHhhcCCcccEEEeCC
Q 015746           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAE----VGNVVGGVTFDVVLDNN  160 (401)
Q Consensus        86 gtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~----~~~~~~~~~~d~Vv~~a  160 (401)
                      .||..|.+|++++..+|++|+++........              ..++..+... .++    +...+..  .|++|++|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~~t~~~m~~~~~~~~~~--~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDVMTALEMEAAVNASVQQ--QNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEECCSHHHHHHHHHHHGGG--CSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------ccccccceehhhHHHHHHHHhhhcc--ceeEeeee
Confidence            4799999999999999999999886553211              1245555444 333    3334444  49999998


Q ss_pred             CC
Q 015746          161 GK  162 (401)
Q Consensus       161 ~~  162 (401)
                      +.
T Consensus        94 Av   95 (223)
T d1u7za_          94 AV   95 (223)
T ss_dssp             BC
T ss_pred             ch
Confidence            84

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.14  E-value=0.0062  Score=49.63  Aligned_cols=95  Identities=16%  Similarity=0.208  Sum_probs=52.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      |+||-|+    ||||++|+.+++.|.++- .++..+.-+.....++..    .++.+. ....+...|.++   ...+. 
T Consensus         1 MikVaIv----GATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~----~~p~~~-~~~~~~~~~~~~---~~~~~-   67 (176)
T d1vkna1           1 MIRAGII----GATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEE----IFPSTL-ENSILSEFDPEK---VSKNC-   67 (176)
T ss_dssp             CEEEEEE----STTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHH----HCGGGC-CCCBCBCCCHHH---HHHHC-
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccc----cCchhh-ccccccccCHhH---hcccc-
Confidence            6899999    999999999999998864 366666533322221110    011111 112222223433   33344 


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       |+|+.+......  ..++.  +..++ ++|=+|+
T Consensus        68 -dvvf~a~p~~~s--~~~~~--~~~~~-~VIDlSa   96 (176)
T d1vkna1          68 -DVLFTALPAGAS--YDLVR--ELKGV-KIIDLGA   96 (176)
T ss_dssp             -SEEEECCSTTHH--HHHHT--TCCSC-EEEESSS
T ss_pred             -ceEEEccccHHH--HHHHH--hhccc-eEEecCc
Confidence             999988775443  22222  12344 5776666

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.10  E-value=0.0068  Score=49.61  Aligned_cols=100  Identities=22%  Similarity=0.244  Sum_probs=63.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC--cccCCCCCC-CcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPF-NRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~--~~~~~~~~~-~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      |+|.|.     |+|..|..++..|.+.||+|++.+|..+.  ...+..... ..+.. ...... +. -.+++.++++++
T Consensus         1 MkI~Vi-----GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~-~~~~~~-i~-~~~~~~~~~~~a   72 (180)
T d1txga2           1 MIVSIL-----GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGV-KLNGVE-IF-WPEQLEKCLENA   72 (180)
T ss_dssp             CEEEEE-----SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTB-CCCSEE-EE-CGGGHHHHHTTC
T ss_pred             CEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcc-hhcccc-cc-ccccHHHHHhcc
Confidence            799999     67999999999999999999999985432  121111110 01100 000111 11 157788888887


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCC-CCEEEEec
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~g-v~~~v~~S  186 (401)
                        |+||.+..  ......+++.++..- -+.+|.++
T Consensus        73 --d~Ii~avp--s~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          73 --EVVLLGVS--TDGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             --SEEEECSC--GGGHHHHHHHHTTTCCSCEEEECC
T ss_pred             --chhhcccc--hhhhHHHHHhhccccccceecccc
Confidence              99988654  677788888776653 23455444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.0048  Score=48.66  Aligned_cols=99  Identities=23%  Similarity=0.249  Sum_probs=60.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC---CCeEEEEecCCCCcccCCCCCCCcccchhcC-CCeEEEcCHhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS---GHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~  150 (401)
                      |||.|+    |++|.+|+.++..|..+   ..++..++..+ ......    ..+.+.... ....+ ...++++ .+++
T Consensus         1 MKV~Ii----GaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a----~Dl~h~~~~~~~~~~-~~~~~~~-~~~~   69 (145)
T d2cmda1           1 MKVAVL----GAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVA----VDLSHIPTAVKIKGF-SGEDATP-ALEG   69 (145)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHH----HHHHTSCSSCEEEEE-CSSCCHH-HHTT
T ss_pred             CEEEEE----cCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHH----HHHHCCccccCCcEE-EcCCCcc-ccCC
Confidence            799999    99999999999887543   46888887643 221100    001111000 11122 1233343 4667


Q ss_pred             CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      .  |+||.++|.              |....+.+.+.+.+.+.+ .+|.+|
T Consensus        70 a--DvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          70 A--DVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             C--SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             C--CEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            6  999999994              566778888888887655 355555

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.09  E-value=0.0039  Score=49.56  Aligned_cols=89  Identities=18%  Similarity=0.073  Sum_probs=55.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |||-|+     |.|.+|+.+++.|+++||+|++.++.+.+....           ...++.+.    ++..+++..+  |
T Consensus         1 MkIgiI-----G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~-----------~~~~~~~~----~~~~e~~~~~--d   58 (152)
T d1i36a2           1 LRVGFI-----GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE-----------RARTVGVT----ETSEEDVYSC--P   58 (152)
T ss_dssp             CEEEEE-----SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH-----------HHHHHTCE----ECCHHHHHTS--S
T ss_pred             CEEEEE-----cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH-----------hhhccccc----ccHHHHHhhc--C
Confidence            789999     689999999999999999999888776543211           10112211    2234556665  9


Q ss_pred             EEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       155 ~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +||-+-..  .....++..+...--+.+|-+|+
T Consensus        59 iIi~~v~~--~~~~~~~~~~~~~~~~~~id~st   89 (152)
T d1i36a2          59 VVISAVTP--GVALGAARRAGRHVRGIYVDINN   89 (152)
T ss_dssp             EEEECSCG--GGHHHHHHHHHTTCCSEEEECSC
T ss_pred             eEEEEecC--chHHHHHHhhcccCCceeeccCc
Confidence            99987653  23334444443332245666665

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.09  E-value=0.0041  Score=48.91  Aligned_cols=98  Identities=17%  Similarity=0.169  Sum_probs=61.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEE-EcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~~~~~~~~~~~  151 (401)
                      |||.|+    |+ |.+|+.++..|+.+|  .+++.++.+++........ .............+. ..|.+    .+.++
T Consensus         1 mKI~II----Ga-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d-~~~~~~~~~~~~~i~~~~~~~----~~~da   70 (142)
T d1guza1           1 MKITVI----GA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALD-MYESGPVGLFDTKVTGSNDYA----DTANS   70 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHH-HHTTHHHHTCCCEEEEESCGG----GGTTC
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhh-hhcccchhcccceEEecCCHH----HhcCC
Confidence            789999    86 999999999999997  4899999887654321100 000001111233333 23343    35665


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEE
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                        |+||-++|.              |..-.+.+++.+.+.+.+-++.
T Consensus        71 --dvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivi  115 (142)
T d1guza1          71 --DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII  115 (142)
T ss_dssp             --SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred             --eEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEE
Confidence              999999984              4555677777777776553443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.04  E-value=0.0063  Score=47.78  Aligned_cols=99  Identities=19%  Similarity=0.135  Sum_probs=60.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      +||-|+    |+ |.+|+.++..|+.++.  +++.++++++........-.......  .......+|.    +.+.++ 
T Consensus         2 ~KI~II----Ga-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~--~~~~~~~~~~----~~~~~a-   69 (142)
T d1y6ja1           2 SKVAII----GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFM--GQMSLYAGDY----SDVKDC-   69 (142)
T ss_dssp             CCEEEE----CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCT--TCEEEC--CG----GGGTTC-
T ss_pred             CeEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccC--CCeeEeeCcH----HHhCCC-
Confidence            589999    87 9999999999999975  89999988865432110000000000  1222233333    245665 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCE-EEEec
Q 015746          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (401)
Q Consensus       153 ~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~-~v~~S  186 (401)
                       |+||-++|.              |....+.+++.+.+.+.+- ++.+|
T Consensus        70 -divvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          70 -DVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             -SEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             -ceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence             999999884              4566777888888876553 44444

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.00  E-value=0.005  Score=49.09  Aligned_cols=102  Identities=18%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccch---hcCCCeEEEcCHhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~D~~~~~~~~  148 (401)
                      +.+||-|+    |+ |.+|+.++..|..++. ++++++.+++.......    .+.+.   .........  ..+.+..+
T Consensus         6 k~~KI~II----Ga-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~----Dl~~~~~~~~~~~~~~~--~~~~~~~~   74 (154)
T d1pzga1           6 RRKKVAMI----GS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKAL----DLSHVTSVVDTNVSVRA--EYSYEAAL   74 (154)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHH----HHHHHHHHTTCCCCEEE--ECSHHHHH
T ss_pred             CCCcEEEE----CC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHH----HHhhhccccCCeeEEec--cCchhhhh
Confidence            35799999    87 9999999998888875 88888877654332110    01110   001111111  23445677


Q ss_pred             cCCcccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~-------------------~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +++  |+|+-++|.                   |....+.+++.+.+.+.+-++.+-|
T Consensus        75 ~~a--diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          75 TGA--DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             TTC--SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCC--CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            777  999998873                   3445677788888777664554443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.87  E-value=0.0037  Score=49.59  Aligned_cols=101  Identities=19%  Similarity=0.295  Sum_probs=64.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      .+||-|+    |+ |++|+.++..|+.+|.  +++.++++++........ ...-..+....+.+..+|.+    .+.++
T Consensus         6 ~~KI~Ii----Ga-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~D-l~~~~~~~~~~~~~~~~d~~----~l~da   75 (148)
T d1ldna1           6 GARVVVI----GA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD-FNHGKVFAPKPVDIWHGDYD----DCRDA   75 (148)
T ss_dssp             SCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-HHHHTTSSSSCCEEEECCGG----GTTTC
T ss_pred             CCeEEEE----Cc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhcc-HhhCccccCCCeEEEECCHH----Hhccc
Confidence            5789999    86 9999999999999875  799999877543221000 00000111224455555553    35666


Q ss_pred             cccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       152 ~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                        |+||.++|.              |....+.+++.+.+.+.+ .|+.+|
T Consensus        76 --Dvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          76 --DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             --SEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             --eeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence              999999884              455666777777777654 455444

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.78  E-value=0.0069  Score=49.26  Aligned_cols=96  Identities=14%  Similarity=0.131  Sum_probs=63.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEc-C---HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWG-D---PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-D---~~~~~  145 (401)
                      ..+.+|+|.    |+ |-||...++.+...|. +|+++++++++.+..           ..-+. +++.- |   .+.+.
T Consensus        26 ~~g~~VlI~----Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-----------~~lGa~~~i~~~~~~~~~~v~   89 (174)
T d1jqba2          26 EMGSSVVVI----GI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-----------KFYGATDILNYKNGHIEDQVM   89 (174)
T ss_dssp             CTTCCEEEE----CC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-----------HHHTCSEEECGGGSCHHHHHH
T ss_pred             CCCCEEEEE----cC-CcchhhhhhhhhcccccccccccchhhhHHHH-----------HhhCccccccccchhHHHHHH
Confidence            346789999    86 9999999999999997 689888877544321           11132 22211 1   44455


Q ss_pred             HhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +...+..+|+||++.|.. ......++.++..|  +++.++
T Consensus        90 ~~t~g~G~D~vid~~g~~-~~~~~a~~~~~~~G--~iv~~G  127 (174)
T d1jqba2          90 KLTNGKGVDRVIMAGGGS-ETLSQAVKMVKPGG--IISNIN  127 (174)
T ss_dssp             HHTTTSCEEEEEECSSCT-THHHHHHHHEEEEE--EEEECC
T ss_pred             HHhhccCcceEEEccCCH-HHHHHHHHHHhcCC--EEEEEe
Confidence            666666689999999853 23344566666554  677765

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.75  E-value=0.0061  Score=47.85  Aligned_cols=97  Identities=19%  Similarity=0.191  Sum_probs=63.0

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCC--CcccCCCCCCCcccc--hhcCCCeEEEcCHhhHHHhhc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDE--NSDKMKKPPFNRFNE--IVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~--~~~~~~~~~~~~~~~--l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ||.|+    ||+|.+|+.++..|+.+|.  ++..++....  ......    ..+.+  .......+..+|.++    +.
T Consensus         2 KV~Ii----GaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a----~Dl~~~~~~~~~~~i~~~~~~~----~~   69 (142)
T d1o6za1           2 KVSVV----GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQA----ADTNHGIAYDSNTRVRQGGYED----TA   69 (142)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHH----HHHHHHHTTTCCCEEEECCGGG----GT
T ss_pred             eEEEE----CCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceee----cchhhcccccCCceEeeCCHHH----hh
Confidence            79999    9999999999999999986  6888775331  111100    01111  012344555556554    35


Q ss_pred             CCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCE-EEEec
Q 015746          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~-~v~~S  186 (401)
                      ++  |+||-++|.              |....+.+++.+++.+.+- ++.+|
T Consensus        70 ~a--DiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          70 GS--DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             TC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             hc--CEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            65  999999883              5667788888888887553 44444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.71  E-value=0.0038  Score=48.97  Aligned_cols=99  Identities=21%  Similarity=0.235  Sum_probs=62.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      |||-|+    |+ |.+|+.++..|+.++.  ++..++.++++.......-.... .+ ........+|.+    .++++ 
T Consensus         1 mKI~II----Ga-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~-~~-~~~~~~~~~~~~----~~~~a-   68 (140)
T d1a5za1           1 MKIGIV----GL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGT-PF-TRRANIYAGDYA----DLKGS-   68 (140)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-GG-SCCCEEEECCGG----GGTTC-
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccc-cc-cccccccCCcHH----HhcCC-
Confidence            799999    86 9999999999998874  89988887654332100000000 01 123444444443    35666 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEec
Q 015746          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       153 ~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                       |+||-++|.              |..-.+.+++.+.+.+.+-++.+-
T Consensus        69 -divvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv  115 (140)
T d1a5za1          69 -DVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (140)
T ss_dssp             -SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             -CEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence             999999984              455677778888887765444443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.68  E-value=0.035  Score=42.83  Aligned_cols=70  Identities=16%  Similarity=0.251  Sum_probs=50.5

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhC-CCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      ||.|+    |++|-+|+.+++.+.+. ++++.+.. +..                           +..   . +...++
T Consensus         1 kI~v~----Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~---------------------------~~~---~-~~~~~~   45 (135)
T d1yl7a1           1 RVGVL----GAKGKVGATMVRAVAAADDLTLSAELDAGD---------------------------PLS---L-LTDGNT   45 (135)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHSTTSEEEEEECTTC---------------------------CTH---H-HHTTTC
T ss_pred             CEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCC---------------------------chh---h-hccccC
Confidence            68999    99999999999998765 66766533 211                           011   1 112346


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      |+||++..  -..+...++.|.+.|++ +|
T Consensus        46 DvvIDFS~--p~~~~~~~~~~~~~~~~-~V   72 (135)
T d1yl7a1          46 EVVIDFTH--PDVVMGNLEFLIDNGIH-AV   72 (135)
T ss_dssp             SEEEECCC--TTTHHHHHHHHHHTTCE-EE
T ss_pred             CEEEEccc--HHHHHHHHHHHHhcCCC-EE
Confidence            99999975  57788899999999985 55

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.67  E-value=0.02  Score=40.83  Aligned_cols=84  Identities=17%  Similarity=0.082  Sum_probs=58.2

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-HhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~~~~~~  153 (401)
                      |||.++    |-.|-==+.||+.|+++||+|.+.++....          ....|...++.+..+. ++.+    .+  +
T Consensus         2 ~~ihfi----GIgG~GMs~LA~~L~~~G~~VsGSD~~~~~----------~t~~L~~~Gi~i~~gh~~~~i----~~--~   61 (89)
T d1j6ua1           2 MKIHFV----GIGGIGMSAVALHEFSNGNDVYGSNIEETE----------RTAYLRKLGIPIFVPHSADNW----YD--P   61 (89)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSSCCH----------HHHHHHHTTCCEESSCCTTSC----CC--C
T ss_pred             cEEEEE----eECHHHHHHHHHHHHhCCCeEEEEeCCCCh----------hHHHHHHCCCeEEeeeccccc----CC--C
Confidence            788888    444433346899999999999999987532          2235666788877663 4333    33  5


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      |.||...++.-+  ..-+.+|++.|++
T Consensus        62 d~vV~SsAI~~~--npel~~A~~~gIp   86 (89)
T d1j6ua1          62 DLVIKTPAVRDD--NPEIVRARMERVP   86 (89)
T ss_dssp             SEEEECTTCCTT--CHHHHHHHHTTCC
T ss_pred             CEEEEecCcCCC--CHHHHHHHHcCCC
Confidence            999998886433  2347888888875

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.65  E-value=0.0058  Score=45.80  Aligned_cols=84  Identities=15%  Similarity=0.133  Sum_probs=55.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc---CHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~~~~~~~~  150 (401)
                      ..||.|.     |.|.+|+-++....+.|++|++++.+++.....          +   .-+++.+   |.+.+.++...
T Consensus        11 ~~kigIl-----GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~----------v---a~~~i~~~~~d~~~l~~~~~~   72 (111)
T d1kjqa2          11 ATRVMLL-----GSGELGKEVAIECQRLGVEVIAVDRYADAPAMH----------V---AHRSHVINMLDGDALRRVVEL   72 (111)
T ss_dssp             CCEEEEE-----SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG----------G---SSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEE-----eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh----------c---CCeEEECCCCCHHHHHHHHHh
Confidence            4689999     589999999999999999999999887543321          1   1234444   46667666655


Q ss_pred             CcccEEEeC-CCCChhhHHHHHHHHHhCCC
Q 015746          151 VTFDVVLDN-NGKNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       151 ~~~d~Vv~~-a~~~~~~~~~ll~aa~~~gv  179 (401)
                      +++|+|..- --+++.    +++.+.+.|+
T Consensus        73 ~~~DviT~E~EnI~~~----~L~~le~~g~   98 (111)
T d1kjqa2          73 EKPHYIVPEIEAIATD----MLIQLEEEGL   98 (111)
T ss_dssp             HCCSEEEECSSCSCHH----HHHHHHHTTC
T ss_pred             hCCceEEEEecCcCHH----HHHHHHHCCC
Confidence            567988632 223333    3455555554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.59  E-value=0.01  Score=47.76  Aligned_cols=37  Identities=32%  Similarity=0.392  Sum_probs=31.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENS  115 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~  115 (401)
                      |++|+|+    | .|.+|..+++.|.+.|+  +|++.+|+++..
T Consensus         1 Mk~I~II----G-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~   39 (171)
T d2g5ca2           1 MQNVLIV----G-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI   39 (171)
T ss_dssp             CCEEEEE----S-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCEEEEE----c-cCHHHHHHHHHHHhcCCCeEEEEEECChHHH
Confidence            5789999    5 79999999999999996  688888877544

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0078  Score=48.64  Aligned_cols=95  Identities=20%  Similarity=0.313  Sum_probs=61.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc----CHhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----DPAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D~~~~~~~  147 (401)
                      .+.+|+|+    |+ |-+|...+..+...|. +|+++++++.+.+..           ..-+.+.+..    |..+..+.
T Consensus        26 ~gd~VlI~----G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-----------~~~Ga~~~~~~~~~~~~~~~~~   89 (171)
T d1pl8a2          26 LGHKVLVC----GA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-----------KEIGADLVLQISKESPQEIARK   89 (171)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-----------HHTTCSEEEECSSCCHHHHHHH
T ss_pred             CCCEEEEE----CC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-----------HHhCCccccccccccccccccc
Confidence            35689999    76 9999999999999998 799998887654321           1123332222    23333333


Q ss_pred             h---cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          148 V---GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       148 ~---~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      +   .+.++|+||++.|.. ......++.++..|  ++++++
T Consensus        90 ~~~~~g~g~Dvvid~~G~~-~~~~~a~~~~~~gG--~iv~~G  128 (171)
T d1pl8a2          90 VEGQLGCKPEVTIECTGAE-ASIQAGIYATRSGG--TLVLVG  128 (171)
T ss_dssp             HHHHHTSCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECS
T ss_pred             ccccCCCCceEEEeccCCc-hhHHHHHHHhcCCC--EEEEEe
Confidence            2   234579999999852 33444555555544  688776

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.46  E-value=0.069  Score=39.91  Aligned_cols=102  Identities=22%  Similarity=0.289  Sum_probs=67.4

Q ss_pred             CeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      |+|.|+    |++   +..|..+.+.|++.||+|+.+....+...                ++.++    .++.++-.  
T Consensus         2 KsIAVv----GaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~----------------G~~~y----~sl~~lp~--   55 (116)
T d1y81a1           2 RKIALV----GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE----------------GLKCY----RSVRELPK--   55 (116)
T ss_dssp             CEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEECB----SSGGGSCT--
T ss_pred             cEEEEE----cccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc----------------Ccccc----ccchhccc--
Confidence            578999    987   77899999999999999887754332111                22222    22333322  


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCe
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~  225 (401)
                      .+|.++-+.  +-..+..+++.|.+.|++.+++-+.  .                   ..-...+++++.|+++
T Consensus        56 ~~D~vvi~v--p~~~~~~~l~~~~~~g~k~v~~~~g--~-------------------~~~~~~~~a~~~gi~v  106 (116)
T d1y81a1          56 DVDVIVFVV--PPKVGLQVAKEAVEAGFKKLWFQPG--A-------------------ESEEIRRFLEKAGVEY  106 (116)
T ss_dssp             TCCEEEECS--CHHHHHHHHHHHHHTTCCEEEECTT--S-------------------CCHHHHHHHHHHTCEE
T ss_pred             cceEEEEEe--CHHHHHHHHHHHHhcCCceEEeccc--h-------------------hhHHHHHHHHHcCCEE
Confidence            368887654  4678888999999999986654221  0                   1124678888888753

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.43  E-value=0.008  Score=49.44  Aligned_cols=100  Identities=14%  Similarity=0.134  Sum_probs=55.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEE-EecCCCCcccCCCCCCCcccchhcCCCe-EEEcC----HhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~~~~~  147 (401)
                      ...|||+    ||+|-+|...++-+...|.++++ ++.++++...+.          ...+.+ ++...    .+.+.++
T Consensus        31 ~etVLI~----gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~----------~~~gad~vi~~~~~~~~~~~~~~   96 (187)
T d1vj1a2          31 NQTMVVS----GAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLT----------SELGFDAAVNYKTGNVAEQLREA   96 (187)
T ss_dssp             CCEEEES----STTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHH----------HHSCCSEEEETTSSCHHHHHHHH
T ss_pred             CCEEEEE----CCCchhhHHHHHHHHHcCCcceecccchHHHHhhhh----------hcccceEEeeccchhHHHHHHHH
Confidence            4689999    99999999999999989986554 455443322110          011222 22222    2333333


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                       ...++|+|+++.|.  ......++..+..|  +++.++...-|.
T Consensus        97 -~~~GvDvv~D~vGg--~~~~~~~~~l~~~G--~iv~~G~~s~~~  136 (187)
T d1vj1a2          97 -CPGGVDVYFDNVGG--DISNTVISQMNENS--HIILCGQISQYN  136 (187)
T ss_dssp             -CTTCEEEEEESSCH--HHHHHHHTTEEEEE--EEEEC-------
T ss_pred             -hccCceEEEecCCc--hhHHHHhhhccccc--cEEEeccccccc
Confidence             34468999999873  33444444444334  788887665543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.42  E-value=0.0063  Score=50.28  Aligned_cols=90  Identities=14%  Similarity=0.146  Sum_probs=57.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCC-Cc-ccchh-cCCCeEEEcCHhhHHHhh
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NR-FNEIV-SAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~-~~~l~-~~~~~~~~~D~~~~~~~~  148 (401)
                      +.|+||.|.     |+|..|.+++..|.+.||+|++.+|+++..+.+..... .+ ++.+. ..++.+    ..++.+++
T Consensus         5 ~~m~KI~Vi-----GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~----t~~l~~a~   75 (189)
T d1n1ea2           5 LYLNKAVVF-----GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF----TSDVEKAY   75 (189)
T ss_dssp             CCEEEEEEE-----CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE----ESCHHHHH
T ss_pred             ceeceEEEE-----CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccccccccc----chhhhhcc
Confidence            446789999     78999999999999999999999998754433221100 00 11111 112222    24577788


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHH
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWA  174 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa  174 (401)
                      +++  |.||-+..  ......+++..
T Consensus        76 ~~a--d~iiiavP--s~~~~~~~~~~   97 (189)
T d1n1ea2          76 NGA--EIILFVIP--TQFLRGFFEKS   97 (189)
T ss_dssp             TTC--SCEEECSC--HHHHHHHHHHH
T ss_pred             CCC--CEEEEcCc--HHHHHHHHHHH
Confidence            887  99887643  55555555544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.36  E-value=0.025  Score=45.36  Aligned_cols=96  Identities=21%  Similarity=0.193  Sum_probs=58.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cCHhhHHHhhc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GDPAEVGNVVG  149 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D~~~~~~~~~  149 (401)
                      ..+.+|+|.    |+ |.+|...++.+...|.+|+++++++++.+..           ..-+.+ ++. .+..++.+...
T Consensus        26 ~~g~~vlI~----Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-----------~~lGa~~~i~~~~~~~~~~~~~   89 (168)
T d1piwa2          26 GPGKKVGIV----GL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-----------MKMGADHYIATLEEGDWGEKYF   89 (168)
T ss_dssp             STTCEEEEE----CC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-----------HHHTCSEEEEGGGTSCHHHHSC
T ss_pred             CCCCEEEEE----CC-CCcchhHHHHhhhccccccccccchhHHHHh-----------hccCCcEEeeccchHHHHHhhh
Confidence            346799999    86 8999999998888899999999988765422           112332 222 22333333333


Q ss_pred             CCcccEEEeCCCCChhh-HHHHHHHHHhCCCCEEEEec
Q 015746          150 GVTFDVVLDNNGKNLDA-VRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~-~~~ll~aa~~~gv~~~v~~S  186 (401)
                      + .+|+|+.+.+..... ....++.++..|  +++.++
T Consensus        90 ~-~~d~vi~~~~~~~~~~~~~~~~~l~~~G--~iv~~G  124 (168)
T d1piwa2          90 D-TFDLIVVCASSLTDIDFNIMPKAMKVGG--RIVSIS  124 (168)
T ss_dssp             S-CEEEEEECCSCSTTCCTTTGGGGEEEEE--EEEECC
T ss_pred             c-ccceEEEEecCCccchHHHHHHHhhccc--eEEEec
Confidence            2 379999987643221 122344444433  577765

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.34  E-value=0.057  Score=38.93  Aligned_cols=87  Identities=18%  Similarity=0.171  Sum_probs=58.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      ..++|.+.    |-.|--=+.+|+.|.++||+|.+.++.....          ...+...++.+..++..+   .+.+  
T Consensus         7 ~~~~ihfi----GigG~GMs~LA~~L~~~G~~VsGSD~~~~~~----------~~~L~~~Gi~v~~g~~~~---~i~~--   67 (96)
T d1p3da1           7 RVQQIHFI----GIGGAGMSGIAEILLNEGYQISGSDIADGVV----------TQRLAQAGAKIYIGHAEE---HIEG--   67 (96)
T ss_dssp             TCCEEEEE----TTTSTTHHHHHHHHHHHTCEEEEEESCCSHH----------HHHHHHTTCEEEESCCGG---GGTT--
T ss_pred             hCCEEEEE----EECHHHHHHHHHHHHhCCCEEEEEeCCCChh----------hhHHHHCCCeEEECCccc---cCCC--
Confidence            35789999    4443333778999999999999999865321          234455688887776322   2244  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          153 FDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       153 ~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      +|.||-..++..+..  -+.+|++.|++
T Consensus        68 ~d~vV~S~AI~~~np--el~~A~~~gip   93 (96)
T d1p3da1          68 ASVVVVSSAIKDDNP--ELVTSKQKRIP   93 (96)
T ss_dssp             CSEEEECTTSCTTCH--HHHHHHHTTCC
T ss_pred             CCEEEECCCcCCCCH--HHHHHHHcCCC
Confidence            499998888654333  36678888875

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.30  E-value=0.032  Score=44.17  Aligned_cols=91  Identities=18%  Similarity=0.156  Sum_probs=50.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC---eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      -||-|+    |||||+|+.+++.|.++.+   ++..++-.......        +.... ........+.    ..+.+ 
T Consensus         2 ~kVaIv----GATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~--------~~~~~-~~~~~~~~~~----~~~~~-   63 (154)
T d2gz1a1           2 YTVAVV----GATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKS--------LKFKD-QDITIEETTE----TAFEG-   63 (154)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCE--------EEETT-EEEEEEECCT----TTTTT-
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHcCCCCceEEEEeccccccccc--------ccccC-Ccccccccch----hhhhh-
Confidence            379999    9999999999999988765   23333322211111        11110 0111111111    12233 


Q ss_pred             cccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       152 ~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                       .|.++.+.+  -......+..+.+.|+ ++|=.|+
T Consensus        64 -~d~~f~~~~--~~~s~~~~~~~~~~~~-~VIDlSs   95 (154)
T d2gz1a1          64 -VDIALFSAG--SSTSAKYAPYAVKAGV-VVVDNTS   95 (154)
T ss_dssp             -CSEEEECSC--HHHHHHHHHHHHHTTC-EEEECSS
T ss_pred             -hhhhhhccC--ccchhhHHhhhccccc-eehhcCh
Confidence             488888776  4555566666667776 5776776

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.21  E-value=0.013  Score=48.26  Aligned_cols=99  Identities=17%  Similarity=0.210  Sum_probs=60.0

Q ss_pred             cCeEEE-EecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-cC---H----hhH
Q 015746           74 KKKVLI-VNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GD---P----AEV  144 (401)
Q Consensus        74 ~~~VlV-t~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D---~----~~~  144 (401)
                      +.+|+| +    ||+|.+|...++.....|.+|++++|..++.+..       ...+...+.+.+. -|   .    +.+
T Consensus        29 g~~vli~~----ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~-------~~~~~~lGad~vi~~~~~~~~~~~~~v   97 (189)
T d1gu7a2          29 GKDWFIQN----GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV-------VASLKELGATQVITEDQNNSREFGPTI   97 (189)
T ss_dssp             TTCEEEES----CTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH-------HHHHHHHTCSEEEEHHHHHCGGGHHHH
T ss_pred             CCEEEEEe----CCCchHHHHHHHHHhhcCCeEEEEEecccccchH-------HhhhhhccccEEEeccccchhHHHHHH
Confidence            455666 7    8999999999999999999999999887654321       1111222333322 11   1    122


Q ss_pred             HHhh--cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          145 GNVV--GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       145 ~~~~--~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .+..  .+.++|+|+++.+.  ......++.++..|  ++|.++.
T Consensus        98 ~~~~~~~g~~vdvv~D~vg~--~~~~~~~~~l~~~G--~~v~~G~  138 (189)
T d1gu7a2          98 KEWIKQSGGEAKLALNCVGG--KSSTGIARKLNNNG--LMLTYGG  138 (189)
T ss_dssp             HHHHHHHTCCEEEEEESSCH--HHHHHHHHTSCTTC--EEEECCC
T ss_pred             HHHHhhccCCceEEEECCCc--chhhhhhhhhcCCc--EEEEECC
Confidence            2222  23358999999873  33455566665544  7886653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.17  E-value=0.0073  Score=47.41  Aligned_cols=98  Identities=15%  Similarity=0.208  Sum_probs=61.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccch---hcCCCeEEEc-CHhhHHHhh
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWG-DPAEVGNVV  148 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~-D~~~~~~~~  148 (401)
                      |||-|+    |+ |.+|..++..|+.+|.  ++..++.+++.......    .+.+.   ......+... |.    +.+
T Consensus         1 MKI~II----Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~al----Dl~~~~~~~~~~~~i~~~~d~----~~~   67 (142)
T d1ojua1           1 MKLGFV----GA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAM----DLAHAAAGIDKYPKIVGGADY----SLL   67 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHH----HHHHHHHTTTCCCEEEEESCG----GGG
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHH----HHhhhccccCCCCccccCCCH----HHh
Confidence            799999    86 9999999999998874  79999877654322000    01110   1112233322 33    255


Q ss_pred             cCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .++  |+||-.+|.              |....+.+.+.+++.+.+-++.+-|
T Consensus        68 ~~a--diVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          68 KGS--EIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             TTC--SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             ccc--cEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            666  999999884              4566777888888887654444443

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.98  E-value=0.093  Score=44.63  Aligned_cols=112  Identities=15%  Similarity=0.183  Sum_probs=72.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCCeE
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGGKT  136 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~~~  136 (401)
                      ....+|+|+    | .|.+|+++++.|...|- ++++++.+.-....+.++......++.              .+.+.+
T Consensus        28 L~~~~Vlii----G-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i  102 (247)
T d1jw9b_          28 LKDSRVLIV----G-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAI  102 (247)
T ss_dssp             HHHCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred             HhCCCEEEE----C-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccch
Confidence            346799999    5 77799999999999997 788888766444444333222222222              133444


Q ss_pred             EEcC----HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccccccc
Q 015746          137 VWGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (401)
Q Consensus       137 ~~~D----~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~  192 (401)
                      ...+    .......+...  |+|+.+.. +...-..+-++|.+.++. +|+.+..+.+|
T Consensus       103 ~~~~~~~~~~~~~~~~~~~--divid~~d-~~~~~~~in~~~~~~~ip-~i~g~~~~~~g  158 (247)
T d1jw9b_         103 TPVNALLDDAELAALIAEH--DLVLDCTD-NVAVRNQLNAGCFAAKVP-LVSGAAIRMEG  158 (247)
T ss_dssp             EEECSCCCHHHHHHHHHTS--SEEEECCS-SHHHHHHHHHHHHHHTCC-EEEEEEEBTEE
T ss_pred             hhhhhhhhhcccccccccc--ceeeeccc-hhhhhhhHHHHHHHhCCC-ccccccccccc
Confidence            3333    45555566654  99998764 356666777788888875 88776655554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.96  E-value=0.016  Score=46.37  Aligned_cols=97  Identities=19%  Similarity=0.294  Sum_probs=76.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .-+|+|.     |.|..|..-++.+..-|.+|++++.+.+..+        +++......+++...+.+.+.+.+.++  
T Consensus        32 pa~V~Vi-----GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~--------~l~~~~~~~~~~~~~~~~~l~~~~~~a--   96 (168)
T d1pjca1          32 PGKVVIL-----GGGVVGTEAAKMAVGLGAQVQIFDINVERLS--------YLETLFGSRVELLYSNSAEIETAVAEA--   96 (168)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------HHHHHHGGGSEEEECCHHHHHHHHHTC--
T ss_pred             CcEEEEE-----CCChHHHHHHHHHhhCCCEEEEEeCcHHHHH--------HHHHhhcccceeehhhhhhHHHhhccC--
Confidence            4689999     7899999999999999999999999886554        234444567888888999999999987  


Q ss_pred             cEEEeCCCC-----ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          154 DVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       154 d~Vv~~a~~-----~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      |+||.++-+     +..-++.+++.++.-.+  +|=++.
T Consensus        97 DivI~aalipG~~aP~lIt~~mv~~Mk~GSV--IVDvai  133 (168)
T d1pjca1          97 DLLIGAVLVPGRRAPILVPASLVEQMRTGSV--IVDVAV  133 (168)
T ss_dssp             SEEEECCCCTTSSCCCCBCHHHHTTSCTTCE--EEETTC
T ss_pred             cEEEEeeecCCcccCeeecHHHHhhcCCCcE--EEEeec
Confidence            999998764     34557777777766554  665554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=94.79  E-value=0.012  Score=46.37  Aligned_cols=96  Identities=24%  Similarity=0.360  Sum_probs=61.0

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccc---hhcCCCeEEEcCHhhHHHhhc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      +||-|+    |+ |.+|+.++..|+.+|.  +++.+++++++......    .+.+   .......+..+|.++    ++
T Consensus         2 kKI~II----Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~----Dl~~a~~~~~~~~~~~~~d~~~----l~   68 (146)
T d1hyha1           2 RKIGII----GL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQI----DFQDAMANLEAHGNIVINDWAA----LA   68 (146)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH----HHHHHGGGSSSCCEEEESCGGG----GT
T ss_pred             CeEEEE----Cc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHH----hhhccccccCCccceeccCHHH----hc
Confidence            789999    85 9999999999998873  78888887654322110    0111   111234455555443    46


Q ss_pred             CCcccEEEeCCCC------------------ChhhHHHHHHHHHhCCCCEEEEe
Q 015746          150 GVTFDVVLDNNGK------------------NLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       150 ~~~~d~Vv~~a~~------------------~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                      ++  |+||-++|.                  |....+.+.+.+++.+.+-++.+
T Consensus        69 ~a--diVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv  120 (146)
T d1hyha1          69 DA--DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV  120 (146)
T ss_dssp             TC--SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             cc--cEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            65  999999883                  34446677777777765544433

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.78  E-value=0.0093  Score=47.42  Aligned_cols=104  Identities=10%  Similarity=0.080  Sum_probs=56.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC----e-E--EEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH----E-V--TIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGN  146 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~----~-V--~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~  146 (401)
                      .+||.|+    ||+|++|++++..|+..+.    . +  ..+.-.. ...+.... ...+.+........+.. .++..+
T Consensus         4 p~KV~Ii----GA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~   76 (154)
T d1y7ta1           4 PVRVAVT----GAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ-AMKALEGV-VMELEDCAFPLLAGLEA-TDDPKV   76 (154)
T ss_dssp             CEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG-GHHHHHHH-HHHHHTTTCTTEEEEEE-ESCHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhccccccccchhHhHhcccc-chhhHcCc-hhhhhcccccccccccc-CCchhh
Confidence            4699999    9999999999999998753    1 1  1111111 11110000 00001111112222222 234456


Q ss_pred             hhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCC-CC-EEEEec
Q 015746          147 VVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFIS  186 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~g-v~-~~v~~S  186 (401)
                      .+++.  |+||-++|.              |....+.+.+.+.+.. -. .++.+|
T Consensus        77 ~~~~a--dvViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          77 AFKDA--DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             HTTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hcccc--cEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            77776  999999984              4566777777777743 22 344455

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.77  E-value=0.024  Score=43.28  Aligned_cols=94  Identities=20%  Similarity=0.142  Sum_probs=65.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .+|+|.     |.|.+|+.+++.+.. .||+++++.-+.++...         ..+  .|+.++  +.+++.+.... ++
T Consensus         4 ~~v~I~-----GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G---------~~I--~Gi~V~--~~~~l~~~~~~-~i   64 (126)
T d2dt5a2           4 WGLCIV-----GMGRLGSALADYPGFGESFELRGFFDVDPEKVG---------RPV--RGGVIE--HVDLLPQRVPG-RI   64 (126)
T ss_dssp             EEEEEE-----CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTT---------CEE--TTEEEE--EGGGHHHHSTT-TC
T ss_pred             ceEEEE-----cCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcC---------CEE--CCEEEe--cHHHHHHHHhh-cc
Confidence            489999     789999999998754 47888887665543322         112  256655  46678887765 35


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccc
Q 015746          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (401)
Q Consensus       154 d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~  189 (401)
                      +.++-+..  -...+.+++.|.+.|++.+.-++...
T Consensus        65 ~iai~~i~--~~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          65 EIALLTVP--REAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             CEEEECSC--HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             cEEEEeCC--HHHHHHHHHHHHHcCCCEEeecCcee
Confidence            66555543  57778899999999998887766543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.76  E-value=0.034  Score=41.69  Aligned_cols=93  Identities=16%  Similarity=0.133  Sum_probs=63.6

Q ss_pred             ccCeEEEEecCCCcc----------ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHh
Q 015746           73 EKKKVLIVNTNSGGH----------AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA  142 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt----------G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~  142 (401)
                      ..++|||.    |+.          -|.+.+.++.|.+.|++++.+..+++...--       ++  ...++.+-....+
T Consensus         3 ~~kkvlVi----GsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd-------~d--~aD~lYfeplt~e   69 (121)
T d1a9xa4           3 DREKIMVL----GGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD-------YD--TSDRLYFEPVTLE   69 (121)
T ss_dssp             SSCEEEEE----CCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS-------TT--SSSEEECCCCSHH
T ss_pred             CCCEEEEE----CCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC-------hh--hcCceEEccCCHH
Confidence            35799999    763          3788999999999999999999888654321       11  0012222233488


Q ss_pred             hHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCC
Q 015746          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      .+.++++..+||.|+-..|-  ....|+...+.+.|++
T Consensus        70 ~v~~Ii~~E~p~~ii~~~GG--Qtalnla~~L~~~gv~  105 (121)
T d1a9xa4          70 DVLEIVRIEKPKGVIVQYGG--QTPLKLARALEAAGVP  105 (121)
T ss_dssp             HHHHHHHHHCCSEEECSSST--HHHHTTHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCEEEeehhh--hhHHHHHHHHHHcCCc
Confidence            89998888889998865552  2345566666778875

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.72  E-value=0.039  Score=42.20  Aligned_cols=87  Identities=18%  Similarity=0.252  Sum_probs=61.3

Q ss_pred             ccCeEEEEecCCCcc---ccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~  148 (401)
                      ..++|.|+    |++   +..|..+.+.|.+.| ++|+.+....+...                ++.++    .++.++-
T Consensus         7 ~PksIAVV----GaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~----------------G~~~y----~sl~dlp   62 (129)
T d2csua1           7 NPKGIAVI----GASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ----------------GVKAY----KSVKDIP   62 (129)
T ss_dssp             SCSEEEEE----TCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET----------------TEECB----SSTTSCS
T ss_pred             CCCeEEEE----ccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC----------------CeEee----cchhhcC
Confidence            35789999    998   999999999998766 68888765443221                22211    2222222


Q ss_pred             cCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       149 ~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .  .+|.++-+..  -..+..+++.|.+.|++.++.+|+
T Consensus        63 ~--~vDlvvi~vp--~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          63 D--EIDLAIIVVP--KRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             S--CCSEEEECSC--HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             C--CCceEEEecC--hHHhHHHHHHHHHcCCCEEEEecc
Confidence            2  3698887654  678888999999999998888776

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.59  E-value=0.022  Score=45.65  Aligned_cols=96  Identities=17%  Similarity=0.253  Sum_probs=59.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcC----HhhHHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD----PAEVGN  146 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D----~~~~~~  146 (401)
                      ...+|+|+    |++|-+|...+..+...|. +|+++++++++.+..           ...+. .++..+    .+.+.+
T Consensus        27 ~g~~vlV~----G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~-----------~~~Ga~~~i~~~~~~~~~~~~~   91 (170)
T d1jvba2          27 PTKTLLVV----GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-----------KRAGADYVINASMQDPLAEIRR   91 (170)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-----------HHHTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----eccccceeeeeecccccccccccccccchhhHHHH-----------HHcCCceeeccCCcCHHHHHHH
Confidence            45789999    9999999999999998885 888888877544321           11133 223222    233334


Q ss_pred             hhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ...+..+|+||++.+.. ......++.++..|  +++.++
T Consensus        92 ~~~~~~~d~vid~~g~~-~~~~~a~~~l~~~G--~iv~~G  128 (170)
T d1jvba2          92 ITESKGVDAVIDLNNSE-KTLSVYPKALAKQG--KYVMVG  128 (170)
T ss_dssp             HTTTSCEEEEEESCCCH-HHHTTGGGGEEEEE--EEEECC
T ss_pred             Hhhcccchhhhcccccc-hHHHhhhhhcccCC--EEEEec
Confidence            43444589999998742 12222334444443  677765

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.56  E-value=0.0036  Score=49.80  Aligned_cols=66  Identities=21%  Similarity=0.201  Sum_probs=46.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |||.+.     |.|.+|+.+++.|++.|++|++..|+.++...+.        .  ..++...    .+..++++.+  |
T Consensus         1 MkIg~I-----G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~--------~--~~g~~~~----~~~~~~~~~~--d   59 (152)
T d2ahra2           1 MKIGII-----GVGKMASAIIKGLKQTPHELIISGSSLERSKEIA--------E--QLALPYA----MSHQDLIDQV--D   59 (152)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHH--------H--HHTCCBC----SSHHHHHHTC--S
T ss_pred             CEEEEE-----eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhc--------c--ccceeee----chhhhhhhcc--c
Confidence            789999     8999999999999999999999999876543221        1  1133322    2344555665  9


Q ss_pred             EEEeCCC
Q 015746          155 VVLDNNG  161 (401)
Q Consensus       155 ~Vv~~a~  161 (401)
                      +||-+.-
T Consensus        60 vIilavk   66 (152)
T d2ahra2          60 LVILGIK   66 (152)
T ss_dssp             EEEECSC
T ss_pred             eeeeecc
Confidence            8887653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.55  E-value=0.057  Score=41.81  Aligned_cols=84  Identities=23%  Similarity=0.143  Sum_probs=58.8

Q ss_pred             ccCeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ..++|.|+    |++   +-.|..+++.|.+.||+|+.+.-......                |..++    .++.++-.
T Consensus        18 ~~ksIAVV----GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~----------------G~~~~----~sl~dlp~   73 (139)
T d2d59a1          18 RYKKIALV----GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL----------------GRKCY----PSVLDIPD   73 (139)
T ss_dssp             HCCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEECB----SSGGGCSS
T ss_pred             cCCeEEEE----eecCCCCCchHHHHHHHHHCCCEEEEECCcccccC----------------CCccc----ccccccCc
Confidence            35789999    988   78999999999999999887764332111                22211    22333322


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~  184 (401)
                      .  +|.|+-+..  ...+..+++.|.+.|++.+++
T Consensus        74 ~--iD~v~i~vp--~~~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          74 K--IEVVDLFVK--PKLTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             C--CSEEEECSC--HHHHHHHHHHHHHHTCSEEEE
T ss_pred             c--ceEEEEEeC--HHHHHHHHHHHHHhCCCEEEE
Confidence            2  688777644  678888999999999986665

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.55  E-value=0.012  Score=46.49  Aligned_cols=37  Identities=22%  Similarity=0.324  Sum_probs=32.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSD  116 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~  116 (401)
                      |||.+.     |.|.+|+++++.|++.| ++|++.+|++++.+
T Consensus         1 MkI~fI-----G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~   38 (152)
T d1yqga2           1 MNVYFL-----GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRE   38 (152)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHH
T ss_pred             CEEEEE-----cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHH
Confidence            789999     55999999999999887 89999999886554

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=94.48  E-value=0.042  Score=43.93  Aligned_cols=94  Identities=19%  Similarity=0.260  Sum_probs=57.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCe-EEE-cCHhhHHHhhc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GDPAEVGNVVG  149 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~D~~~~~~~~~  149 (401)
                      ..+.+|+|.    |+ |-||...++.+...|.+|++++++.++.+..           ...+.+ ++. .+.+......+
T Consensus        29 ~~G~~VlI~----Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-----------~~lGad~~i~~~~~~~~~~~~~   92 (168)
T d1uufa2          29 GPGKKVGVV----GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-----------KALGADEVVNSRNADEMAAHLK   92 (168)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-----------HHHTCSEEEETTCHHHHHTTTT
T ss_pred             CCCCEEEEe----cc-chHHHHHHHHhhcccccchhhccchhHHHHH-----------hccCCcEEEECchhhHHHHhcC
Confidence            446899999    86 7899999999999999999998877654321           112332 222 22333333333


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                        ++|++|++.+... .....++.++..|  +++.++
T Consensus        93 --~~D~vid~~g~~~-~~~~~~~~l~~~G--~iv~~G  124 (168)
T d1uufa2          93 --SFDFILNTVAAPH-NLDDFTTLLKRDG--TMTLVG  124 (168)
T ss_dssp             --CEEEEEECCSSCC-CHHHHHTTEEEEE--EEEECC
T ss_pred             --CCceeeeeeecch-hHHHHHHHHhcCC--EEEEec
Confidence              3699999987432 2223344443333  577655

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.40  E-value=0.018  Score=44.96  Aligned_cols=100  Identities=16%  Similarity=0.211  Sum_probs=61.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEE-EcCHhhHHHhhcCCc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGVT  152 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~~~~~~~~~~~~  152 (401)
                      +||-|+    |+ |.+|..++..|+.++. ++..++..++........ ...-..+......+. ..|.++    +.++ 
T Consensus         2 ~KI~II----Ga-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~D-l~~~~~~~~~~~~i~~~~d~~~----~~~a-   70 (142)
T d1uxja1           2 KKISII----GA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALD-LYEASPIEGFDVRVTGTNNYAD----TANS-   70 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHH-HHTTHHHHTCCCCEEEESCGGG----GTTC-
T ss_pred             CeEEEE----CC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHH-hhccccccCCCCEEEecCcHHH----hcCC-
Confidence            689999    86 9999999999988875 888888766543221100 000001111233333 234432    3555 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCEEEEec
Q 015746          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       153 ~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                       |+||-++|.              |....+.+++.+.+.+.+-++.+-
T Consensus        71 -dvvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv  117 (142)
T d1uxja1          71 -DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV  117 (142)
T ss_dssp             -SEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred             -CEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence             999999984              455677888888887765444443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.39  E-value=0.02  Score=46.49  Aligned_cols=102  Identities=12%  Similarity=0.063  Sum_probs=58.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC---C----eEEEEecCCCCc--ccCCCCCCCcccchhcCCCeEEEcCHhhH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG---H----EVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g---~----~V~~~~r~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D~~~~  144 (401)
                      ..||.||    ||+|.||+.++-.|+..+   .    .++.++......  ..+.-    .+.+...+....+.. ..+.
T Consensus        24 ~~kV~I~----GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~m----dl~d~a~~~~~~~~~-~~~~   94 (175)
T d7mdha1          24 LVNIAVS----GAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAM----ELEDSLYPLLREVSI-GIDP   94 (175)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHH----HHHTTTCTTEEEEEE-ESCH
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhh----hhcccccccccCccc-cccc
Confidence            3589999    999999999999998753   1    334444333111  11000    001111111111111 2445


Q ss_pred             HHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-C-EEEEec
Q 015746          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-K-QFLFIS  186 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv-~-~~v~~S  186 (401)
                      .+.+++.  |+||-.+|.              |....+.+.+++.+... . +++.+|
T Consensus        95 ~~~~~~a--DvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          95 YEVFEDV--DWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             HHHTTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhccCC--ceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            5677776  999999984              45667788888877532 2 455554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.32  E-value=0.015  Score=46.43  Aligned_cols=99  Identities=15%  Similarity=0.215  Sum_probs=62.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccc---hhcCCCeEEEcCHhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~D~~~~~~~  147 (401)
                      +.+||-|+    |+ |.+|..++..|+.+|.  ++..++++++.......    .+.+   +.........+|.+    .
T Consensus        19 ~~~KV~II----Ga-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~al----Dl~h~~~~~~~~~~~~~~d~~----~   85 (160)
T d1i0za1          19 PNNKITVV----GV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMM----DLQHGSLFLQTPKIVADKDYS----V   85 (160)
T ss_dssp             CSSEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----HHHHTGGGCCCSEEEECSSGG----G
T ss_pred             CCCeEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHH----HHhccccccCCCeEEeccchh----h
Confidence            35799999    85 9999999999999986  79999887654322100    0111   11111112222333    3


Q ss_pred             hcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      +.++  |+||..||.              |....+.++..+++.+.+ -++.+|
T Consensus        86 ~~~a--diVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          86 TANS--KIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             GTTC--SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cccc--cEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            4665  999999984              456677778888887655 355554

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.24  E-value=0.07  Score=40.50  Aligned_cols=83  Identities=19%  Similarity=0.259  Sum_probs=56.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC---HhhHHHh-hcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~~~~~-~~~  150 (401)
                      |+|+|.    | -|-+|+.+++.|  +|++|.++..+++..           ..+...++.++.||   ++.|.++ +..
T Consensus         1 kHivI~----G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~-----------~~~~~~~~~~i~Gd~~~~~~L~~a~i~~   62 (129)
T d2fy8a1           1 RHVVIC----G-WSESTLECLREL--RGSEVFVLAEDENVR-----------KKVLRSGANFVHGDPTRVSDLEKANVRG   62 (129)
T ss_dssp             CCEEEE----S-CCHHHHHHHHTS--CGGGEEEEESCTTHH-----------HHHHHTTCEEEESCTTSHHHHHHTTCTT
T ss_pred             CEEEEE----C-CCHHHHHHHHHH--cCCCCEEEEcchHHH-----------HHHHhcCccccccccCCHHHHHHhhhhc
Confidence            578999    5 688899999998  467788888776543           33445689999999   4445554 333


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCC
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSG  178 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~g  178 (401)
                        .+.++-+... -.....++..+++..
T Consensus        63 --A~~vi~~~~~-d~~n~~~~~~~r~~~   87 (129)
T d2fy8a1          63 --ARAVIVNLES-DSETIHCILGIRKID   87 (129)
T ss_dssp             --CSEEEECCSS-HHHHHHHHHHHHHHC
T ss_pred             --CcEEEEeccc-hhhhHHHHHHHHHHC
Confidence              5888876653 334444555666654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.17  E-value=0.089  Score=42.26  Aligned_cols=96  Identities=17%  Similarity=0.160  Sum_probs=56.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----------
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----------  140 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----------  140 (401)
                      |++||-|-     |-|-||+.+++.|+++. .+|+++.-..+...         ...+...+...+..+           
T Consensus         1 M~irIaIN-----GfGRIGR~v~Ral~~~~dieiVaINd~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~   66 (172)
T d2czca2           1 MKVKVGVN-----GYGTIGKRVAYAVTKQDDMELIGITKTKPDFE---------AYRAKELGIPVYAASEEFIPRFEKEG   66 (172)
T ss_dssp             CCEEEEEE-----CCSHHHHHHHHHHHTCTTEEEEEEEESSCSHH---------HHHHHHTTCCEEESSGGGHHHHHHHT
T ss_pred             CcEEEEEE-----CCCHHHHHHHHHHHhCCCceEEEEecCCChHH---------HHHhhhcCceeecccccceeeecccC
Confidence            45799999     58999999999999874 57766653222111         011111223333332           


Q ss_pred             ---HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          141 ---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       141 ---~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                         ...+..++.+  +|+|+.|.|...  +..-++...+.|+| .|++|+
T Consensus        67 ~~~~~~~~~~~~~--vDvViEcTG~f~--~~~~~~~hl~~G~k-~Vi~s~  111 (172)
T d2czca2          67 FEVAGTLNDLLEK--VDIIVDATPGGI--GAKNKPLYEKAGVK-AIFQGG  111 (172)
T ss_dssp             CCCSCBHHHHHTT--CSEEEECCSTTH--HHHHHHHHHHHTCE-EEECTT
T ss_pred             ccccchhhhhhcc--CCEEEECCCCCC--CHHHHHHHHHcCCC-EEEECC
Confidence               1233334444  599999999643  33344555677875 666665

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.05  E-value=0.051  Score=43.06  Aligned_cols=100  Identities=19%  Similarity=0.223  Sum_probs=56.1

Q ss_pred             cCeEEEEecCCCccccchHHHH-HHHHhCC-CeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLA-KELLGSG-HEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~-~~Ll~~g-~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ++||-|+    | +|.||+.+. +.|.... .+++++. |+.+...         .......++.+.....+++.+..+.
T Consensus         4 kirvaII----G-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~---------~~~a~~~~i~~~~~~~d~l~~~~~~   69 (157)
T d1nvmb1           4 KLKVAII----G-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDG---------LARAQRMGVTTTYAGVEGLIKLPEF   69 (157)
T ss_dssp             CEEEEEE----C-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHH---------HHHHHHTTCCEESSHHHHHHHSGGG
T ss_pred             CcEEEEE----c-CcHHHHHHHHHHHhhCCcceEEEEEecchhccc---------hhhhhhcCCcccccceeeeeecccc
Confidence            4689999    8 999998654 5544443 4676664 5543221         0111223566554456666665554


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEeccc
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~  188 (401)
                      .++|+||.+...........+-.+.+.|+ ++|-.|+.
T Consensus        70 ~~iDiVf~ATpag~h~~~~~~~~aa~~G~-~VID~s~a  106 (157)
T d1nvmb1          70 ADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPA  106 (157)
T ss_dssp             GGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTT
T ss_pred             cccCEEEEcCCchhHHHhHHHHHHHHcCC-EEEEcccc
Confidence            45799998654222222223333346675 67777763

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.96  E-value=0.081  Score=42.31  Aligned_cols=83  Identities=16%  Similarity=0.050  Sum_probs=51.7

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhC-CCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      +++||.|+    | .|++|+.+++.|.+. +.+++++. |+.+....                .....  ..+......+
T Consensus         2 ~kirvgii----G-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~----------------~~~~~--~~~~~~~~~~   58 (170)
T d1f06a1           2 TNIRVAIV----G-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK----------------TPVFD--VADVDKHADD   58 (170)
T ss_dssp             CCEEEEEE----C-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS----------------SCEEE--GGGGGGTTTT
T ss_pred             CcceEEEE----C-ChHHHHHHHHHHHhCCCcEEEEEEecccccccc----------------ccccc--chhhhhhccc
Confidence            45789999    5 799999999999876 56776655 44332211                11111  2223333443


Q ss_pred             CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                        +|+|+.+...+  ....++..|.++|+ ++|
T Consensus        59 --~D~Vvi~tp~~--~h~~~a~~aL~aG~-~vv   86 (170)
T d1f06a1          59 --VDVLFLCMGSA--TDIPEQAPKFAQFA-CTV   86 (170)
T ss_dssp             --CSEEEECSCTT--THHHHHHHHHTTTS-EEE
T ss_pred             --cceEEEeCCCc--ccHHHHHHHHHCCC-cEE
Confidence              69999887654  34556667777886 555

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=93.94  E-value=0.063  Score=41.79  Aligned_cols=98  Identities=13%  Similarity=0.210  Sum_probs=62.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccch--hcCCCeEEEcCHhhHHHhhcC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .||-|+    |+ |.+|..++..|+.+|.  ++..+++++++......    .+.+.  ......+...+  +++ .+.+
T Consensus         2 ~Ki~II----Ga-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~----Dl~~a~~~~~~~~i~~~~--~~~-~~~d   69 (143)
T d1llda1           2 TKLAVI----GA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVL----DMQHGSSFYPTVSIDGSD--DPE-ICRD   69 (143)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHH----HHHHTGGGSTTCEEEEES--CGG-GGTT
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHH----HHHhccccCCCceeecCC--CHH-HhhC
Confidence            589999    86 9999999999999985  89999887754332100    00100  01123333332  232 3566


Q ss_pred             CcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCCE-EEEec
Q 015746          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (401)
Q Consensus       151 ~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~~-~v~~S  186 (401)
                      +  |+||-++|.              |....+.++..+.+.+.+- ++.+|
T Consensus        70 a--DvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          70 A--DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             C--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             C--cEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            5  999999994              5666777778887777553 44444

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.89  E-value=0.019  Score=46.34  Aligned_cols=95  Identities=19%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCC-eEEEcC---HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD---PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D---~~~~~~~  147 (401)
                      ...+|+|.    |+ |.+|...+..+...|. .|++.++++++.+..           ...+. +++..+   .+...+.
T Consensus        32 ~g~~vli~----Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~-----------~~~ga~~~i~~~~~~~~~~~~~   95 (172)
T d1h2ba2          32 PGAYVAIV----GV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-----------ERLGADHVVDARRDPVKQVMEL   95 (172)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-----------HHTTCSEEEETTSCHHHHHHHH
T ss_pred             CCCEEEEe----CC-ChHHHHHHHHHHhhcCcccccccchhHHHHHH-----------hhcccceeecCcccHHHHHHHh
Confidence            35689999    75 9999999999888886 566677776544321           11122 334333   3334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ..+.++|+||++.+.. ......++.++..|  +++.++
T Consensus        96 ~~~~g~d~vid~~g~~-~~~~~a~~~l~~~G--~iv~~G  131 (172)
T d1h2ba2          96 TRGRGVNVAMDFVGSQ-ATVDYTPYLLGRMG--RLIIVG  131 (172)
T ss_dssp             TTTCCEEEEEESSCCH-HHHHHGGGGEEEEE--EEEECC
T ss_pred             hCCCCceEEEEecCcc-hHHHHHHHHHhCCC--EEEEEe
Confidence            4555689999998852 12333344444444  688765

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.89  E-value=0.086  Score=42.60  Aligned_cols=100  Identities=13%  Similarity=0.120  Sum_probs=54.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccC----CCCC----CCcccchhcCCCeEEEcCHhhH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKM----KKPP----FNRFNEIVSAGGKTVWGDPAEV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~----~~~~----~~~~~~l~~~~~~~~~~D~~~~  144 (401)
                      |.||-|-    | .|.||+.+++.|.+++ .+|+++....+.....    ....    ......+...++. +.   ..+
T Consensus         1 MIKVaIN----G-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-v~---g~~   71 (178)
T d1b7go1           1 MVNVAVN----G-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIP-VA---GTV   71 (178)
T ss_dssp             CEEEEEE----C-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCC-CC---CCH
T ss_pred             CeEEEEE----C-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceecccccee-cC---Cch
Confidence            4689999    5 8999999999999874 6887776433221100    0000    0000000111111 11   123


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ..++.+  +|+|+.|.|..  ....-++...+.|. ++|+.++
T Consensus        72 ~~~~~~--vDiViecTG~f--~~~e~a~~hl~~G~-KvIi~~~  109 (178)
T d1b7go1          72 EDLIKT--SDIVVDTTPNG--VGAQYKPIYLQLQR-NAIFQGG  109 (178)
T ss_dssp             HHHHHH--CSEEEECCSTT--HHHHHHHHHHHTTC-EEEECTT
T ss_pred             hhhhhc--CCEEEECCCCc--CCHHHHHHHHHcCC-EEEEECC
Confidence            333344  49999999963  23344556667785 5776543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.88  E-value=0.084  Score=43.31  Aligned_cols=75  Identities=15%  Similarity=0.151  Sum_probs=51.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~  145 (401)
                      ..+.+|||.    |+ |-+|...+..+...|. +|+++++++++.+.           ....+.+.+...     .+.+.
T Consensus        24 ~~G~tVlV~----Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~-----------a~~~Ga~~~~~~~~~~~~~~i~   87 (195)
T d1kola2          24 GPGSTVYVA----GA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH-----------AKAQGFEIADLSLDTPLHEQIA   87 (195)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-----------HHHTTCEEEETTSSSCHHHHHH
T ss_pred             CCCCEEEEE----Cc-CHHHHHHHHHHHhhcccceeeecccchhhHh-----------hhhccccEEEeCCCcCHHHHHH
Confidence            346799999    75 8999888888888876 68888877754332           222344444321     34556


Q ss_pred             HhhcCCcccEEEeCCCC
Q 015746          146 NVVGGVTFDVVLDNNGK  162 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~  162 (401)
                      ++..+..+|++|++.|.
T Consensus        88 ~~t~g~g~D~vid~vG~  104 (195)
T d1kola2          88 ALLGEPEVDCAVDAVGF  104 (195)
T ss_dssp             HHHSSSCEEEEEECCCT
T ss_pred             HHhCCCCcEEEEECccc
Confidence            66667678999999884

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=93.84  E-value=0.032  Score=45.52  Aligned_cols=34  Identities=18%  Similarity=0.374  Sum_probs=28.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEe
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMT  109 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~  109 (401)
                      +++.||-|+    |||||+|+.+++.|.++- .++..+.
T Consensus         3 ~~kikVaIl----GATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           3 GEEVRIAVL----GASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SSCEEEEEE----SCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCccEEEEE----CcccHHHHHHHHHHHhCCCceEEEEe
Confidence            456799999    999999999999999874 3666554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.83  E-value=0.041  Score=44.31  Aligned_cols=95  Identities=11%  Similarity=0.236  Sum_probs=56.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEE-EEecCCCCcccCCCCCCCcccchhcCCC-eEEEcC----HhhHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-IMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD----PAEVG  145 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D----~~~~~  145 (401)
                      ..+.+|+|.    |+ |.||...+..+...|++++ +.++++.+.+..        .++   +. +++..+    .+.+.
T Consensus        27 ~~g~~VlI~----G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a--------~~~---Ga~~~i~~~~~~~~~~i~   90 (174)
T d1f8fa2          27 TPASSFVTW----GA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA--------KQL---GATHVINSKTQDPVAAIK   90 (174)
T ss_dssp             CTTCEEEEE----SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH--------HHH---TCSEEEETTTSCHHHHHH
T ss_pred             CCCCEEEEe----CC-CHHHhhhhhcccccccceeeeeccHHHHHHHH--------HHc---CCeEEEeCCCcCHHHHHH
Confidence            346789999    87 9999999999988888655 455555433211        111   22 333333    23333


Q ss_pred             HhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       146 ~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ++..+ ++|+||++.|.. ......++.++..|  ++++++
T Consensus        91 ~~t~g-g~D~vid~~G~~-~~~~~~~~~~~~~G--~i~~~G  127 (174)
T d1f8fa2          91 EITDG-GVNFALESTGSP-EILKQGVDALGILG--KIAVVG  127 (174)
T ss_dssp             HHTTS-CEEEEEECSCCH-HHHHHHHHTEEEEE--EEEECC
T ss_pred             HHcCC-CCcEEEEcCCcH-HHHHHHHhcccCce--EEEEEe
Confidence            34333 689999998842 23333444444444  688766

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.75  E-value=0.12  Score=40.58  Aligned_cols=101  Identities=16%  Similarity=0.155  Sum_probs=60.9

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCC---CCCCcccchhcCCCeEEEc-CHhh----HHHh
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK---PPFNRFNEIVSAGGKTVWG-DPAE----VGNV  147 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~-D~~~----~~~~  147 (401)
                      ||-+.     |.|.+|..++++|++.|+.| +..|..++..+...   ........+....+.+... +.+.    ...+
T Consensus         2 kIg~I-----GlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l   75 (156)
T d2cvza2           2 KVAFI-----GLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEAL   75 (156)
T ss_dssp             CEEEE-----CCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred             eEEEE-----eHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccc
Confidence            57888     68999999999999999876 56676654332110   0001112222222222211 1222    2333


Q ss_pred             hcCC-cccEEEeCCCCChhhHHHHHHHHHhCCCCEEE
Q 015746          148 VGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (401)
Q Consensus       148 ~~~~-~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v  183 (401)
                      +... +-..++++...+...++.+.+.+++.|+ +||
T Consensus        76 ~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi-~~l  111 (156)
T d2cvza2          76 YPYLREGTYWVDATSGEPEASRRLAERLREKGV-TYL  111 (156)
T ss_dssp             TTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTE-EEE
T ss_pred             cccccccccccccccCCHHHHHHHHHHHHHcCC-eEE
Confidence            3333 2477888888899999999999988876 455

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.55  E-value=0.012  Score=46.75  Aligned_cols=102  Identities=11%  Similarity=0.097  Sum_probs=55.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-------eEEEEecCCCCc--ccCCCCCCCcccchhcCCCeEEEcCHhhH
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~~~r~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D~~~~  144 (401)
                      .+||.|+    ||+|.+|++++..|+..+-       +++.++.+....  ..+.-    ...+........+.. ..+.
T Consensus         3 p~KV~Ii----GA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~----~~~~~~~~~~~~~~~-~~~~   73 (154)
T d5mdha1           3 PIRVLVT----GAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLM----ELQDCALPLLKDVIA-TDKE   73 (154)
T ss_dssp             CEEEEES----STTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHH----HHHHTCCTTEEEEEE-ESCH
T ss_pred             ceEEEEE----CCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhh----hhccccccccccccc-Cccc
Confidence            4799999    9999999999999987542       233333332111  11000    000000111111111 2334


Q ss_pred             HHhhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhC-CCC-EEEEec
Q 015746          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSS-GVK-QFLFIS  186 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~-gv~-~~v~~S  186 (401)
                      .+.++++  |+||-++|.              |..-.+.+.+.+.+. +-. .++.+|
T Consensus        74 ~~~~~~~--dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          74 EIAFKDL--DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             HHHTTTC--SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccccCCc--eEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            4667776  999999984              355666777766553 433 344444

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.50  E-value=0.08  Score=50.55  Aligned_cols=113  Identities=19%  Similarity=0.203  Sum_probs=71.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCC---------------cccchh-cCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIV-SAGG  134 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~---------------~~~~l~-~~~~  134 (401)
                      ....+|||+    |+ |.+|..+++.|...|. ++++++.+.-....+..+-+.               ++.++. ...+
T Consensus        23 L~~s~Vlvv----G~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i   97 (529)
T d1yova1          23 LESAHVCLI----NA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSG   97 (529)
T ss_dssp             HHHCEEEEC----CC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBC
T ss_pred             HhCCCEEEE----CC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcE
Confidence            345799999    76 6699999999999995 788887644222211111000               011111 0124


Q ss_pred             eEEEcCHhhHH----HhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccC
Q 015746          135 KTVWGDPAEVG----NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (401)
Q Consensus       135 ~~~~~D~~~~~----~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~  193 (401)
                      +.+..++.++.    ..+.+  +|+||.+. .+......+-++|++.+++ ||..++.|.||.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~--~dvVv~~~-~~~~~~~~l~~~c~~~~ip-~i~~~~~G~~G~  156 (529)
T d1yova1          98 SFVEESPENLLDNDPSFFCR--FTVVVATQ-LPESTSLRLADVLWNSQIP-LLICRTYGLVGY  156 (529)
T ss_dssp             CEESSCHHHHHHSCGGGGGG--CSEEEEES-CCHHHHHHHHHHHHHHTCC-EEEEEEETTEEE
T ss_pred             EEEcCCchhhhhhHHHHhcC--CCEEEECC-CCHHHHHHHHHHHHHcCCC-EEEEeccCCEEE
Confidence            44555554432    23444  59999765 4677777889999999985 999999888873

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.48  E-value=0.085  Score=39.90  Aligned_cols=76  Identities=18%  Similarity=0.109  Sum_probs=55.1

Q ss_pred             ccCeEEEEecCCCc----------cccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHh
Q 015746           73 EKKKVLIVNTNSGG----------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA  142 (401)
Q Consensus        73 ~~~~VlVt~~~~Gg----------tG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~  142 (401)
                      ..++|||.    |+          --|.+.+.++.|.+.|++++.+..+++...-       .++  ...++.+-..+.+
T Consensus         6 ~~kkvlil----GsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVst-------d~d--~aD~lYfePlt~e   72 (127)
T d1a9xa3           6 DIKSILIL----GAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMT-------DPE--MADATYIEPIHWE   72 (127)
T ss_dssp             SCCEEEEE----CCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGG-------CGG--GSSEEECSCCCHH
T ss_pred             CCCEEEEE----CCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhc-------Chh--hcceeeeecCCHH
Confidence            35899999    77          4578899999999999999999888865321       111  1112333333589


Q ss_pred             hHHHhhcCCcccEEEeCCC
Q 015746          143 EVGNVVGGVTFDVVLDNNG  161 (401)
Q Consensus       143 ~~~~~~~~~~~d~Vv~~a~  161 (401)
                      .+.++++..+||.|+-..|
T Consensus        73 ~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          73 VVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHhCcCCeEEEee
Confidence            9999999888999997655

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.26  E-value=0.017  Score=47.59  Aligned_cols=38  Identities=29%  Similarity=0.427  Sum_probs=30.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~  118 (401)
                      |||.|.     |.||+|..++..| ++||+|++++-+++..+.+
T Consensus         1 MkI~Vi-----GlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           1 MKIAVA-----GSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred             CEEEEE-----CCChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence            789999     4999999998655 6799999999887654433

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.23  E-value=0.054  Score=40.84  Aligned_cols=36  Identities=31%  Similarity=0.454  Sum_probs=32.8

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++|+|+     |.|++|-.++..|.++|.+|+++.+.+.-
T Consensus        30 ~~~vvII-----GgG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIV-----GGGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEE-----CcchhHHHHHHHhhcccceEEEEeecccc
Confidence            5799999     78999999999999999999999998853

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.22  E-value=0.068  Score=40.26  Aligned_cols=36  Identities=22%  Similarity=0.402  Sum_probs=32.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++++|+     |.|+||-.++..|.+.|.+|+++.+.+.-
T Consensus        23 p~~~vIi-----G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTII-----GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEE-----CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            4799999     78999999999999999999999987743

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=93.11  E-value=0.046  Score=43.86  Aligned_cols=40  Identities=18%  Similarity=0.152  Sum_probs=34.1

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      ..+++|||.    | +|..++.++..|.+.|.+|+++.|+.++..
T Consensus        16 ~~~k~vlIl----G-aGGaarai~~al~~~g~~i~I~nRt~~ka~   55 (170)
T d1nyta1          16 RPGLRILLI----G-AGGASRGVLLPLLSLDCAVTITNRTVSRAE   55 (170)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred             CCCCEEEEE----C-CcHHHHHHHHHhcccceEEEeccchHHHHH
Confidence            456899999    5 577799999999999999999999886654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.08  E-value=0.12  Score=40.92  Aligned_cols=93  Identities=17%  Similarity=0.199  Sum_probs=58.5

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC-----HhhHHHh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNV  147 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~~~~~  147 (401)
                      .+.+|||.    |+ |-||...+..+...|++|+++++++++.+.           ....+.+.+...     .+.+...
T Consensus        27 ~g~~vlv~----G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~-----------~k~~Ga~~~~~~~~~~~~~~~~~~   90 (168)
T d1rjwa2          27 PGEWVAIY----GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-----------AKELGADLVVNPLKEDAAKFMKEK   90 (168)
T ss_dssp             TTCEEEEE----CC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-----------HHHTTCSEEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEe----ec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh-----------hhhcCcceecccccchhhhhcccc
Confidence            45789999    76 889999999999999999999987765432           222355555442     2334444


Q ss_pred             hcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ..+  .+.+|.+++. -......++.++..|  +++.++
T Consensus        91 ~~~--~~~~v~~~~~-~~~~~~a~~~l~~~G--~i~~~g  124 (168)
T d1rjwa2          91 VGG--VHAAVVTAVS-KPAFQSAYNSIRRGG--ACVLVG  124 (168)
T ss_dssp             HSS--EEEEEESSCC-HHHHHHHHHHEEEEE--EEEECC
T ss_pred             cCC--CceEEeecCC-HHHHHHHHHHhccCC--ceEecc
Confidence            444  3555555543 344555566655444  466654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=93.00  E-value=0.37  Score=38.21  Aligned_cols=96  Identities=13%  Similarity=0.154  Sum_probs=57.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc--C----HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D----PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D----~~~~  144 (401)
                      ..+.+|+|.    |+. .+|...+..+...|. +|+++++++++.+..++           .+...+..  +    .+..
T Consensus        27 k~GdtVlV~----GaG-G~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----------~Ga~~~i~~~~~~~~~~~~   90 (176)
T d2jhfa2          27 TQGSTCAVF----GLG-GVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----------VGATECVNPQDYKKPIQEV   90 (176)
T ss_dssp             CTTCEEEEE----CCS-HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------TTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----CCC-CcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----------hCCeeEEecCCchhHHHHH
Confidence            346789999    985 489999999999885 78888888876543222           12222211  1    3334


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEe
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                      .....+.++|+||.+.|.. ......++.++..+ ..++..
T Consensus        91 ~~~~~~~G~D~vid~~G~~-~~~~~a~~~~~~~~-g~~~~~  129 (176)
T d2jhfa2          91 LTEMSNGGVDFSFEVIGRL-DTMVTALSCCQEAY-GVSVIV  129 (176)
T ss_dssp             HHHHTTSCBSEEEECSCCH-HHHHHHHHHBCTTT-CEEEEC
T ss_pred             HHHHhcCCCCEEEecCCch-hHHHHHHHHHhcCC-cceEEe
Confidence            4444555689999998853 22333444444433 234433

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=92.95  E-value=0.29  Score=39.06  Aligned_cols=97  Identities=15%  Similarity=0.195  Sum_probs=58.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc----C--HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D--PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D--~~~~  144 (401)
                      ..+.+|+|+    |+ |-||...+..+...|. .|++.+.++++....+           .-+...+..    |  ....
T Consensus        27 ~~G~~VlV~----G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-----------~~Ga~~~i~~~~~~~~~~~~   90 (174)
T d1e3ia2          27 TPGSTCAVF----GL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-----------ALGATDCLNPRELDKPVQDV   90 (174)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----CC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-----------HhCCCcccCCccchhhhhhh
Confidence            346789999    75 9999999999999998 5777777776543211           113322221    1  3334


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      .....+.++|+||++.|.. ......++.++. +-.+++.++
T Consensus        91 ~~~~~~~G~d~vie~~G~~-~~~~~a~~~~~~-g~G~~v~vG  130 (174)
T d1e3ia2          91 ITELTAGGVDYSLDCAGTA-QTLKAAVDCTVL-GWGSCTVVG  130 (174)
T ss_dssp             HHHHHTSCBSEEEESSCCH-HHHHHHHHTBCT-TTCEEEECC
T ss_pred             HhhhhcCCCcEEEEecccc-hHHHHHHHHhhc-CCeEEEecC
Confidence            4444555789999998842 122233333333 223788766

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.88  E-value=0.064  Score=39.95  Aligned_cols=36  Identities=28%  Similarity=0.420  Sum_probs=32.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++|+|+     |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        22 p~~v~Ii-----GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          22 PKSLVVI-----GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEE-----CCCccceeeeeeecccccEEEEEEeccee
Confidence            4799999     78999999999999999999999988843

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.86  E-value=0.015  Score=46.35  Aligned_cols=100  Identities=14%  Similarity=0.208  Sum_probs=59.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCCCCcccCCCCCCCcccc---hhcCCCeEEEcCHhhHHH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTVWGDPAEVGN  146 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~D~~~~~~  146 (401)
                      +...||-|+    |+ |.+|..++..|+.+|.  +++.++++.+.......    .+.+   ...........|.+    
T Consensus        17 ~~~~KI~II----Ga-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~al----Dl~~~~~~~~~~~~~~~~d~~----   83 (159)
T d2ldxa1          17 LSRCKITVV----GV-GDVGMACAISILLKGLADELALVDADTDKLRGEAL----DLQHGSLFLSTPKIVFGKDYN----   83 (159)
T ss_dssp             CCCCEEEEE----CC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHH----HHHHTTTTCSCCEEEEESSGG----
T ss_pred             CCCCeEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHH----HHhCcchhcCCCeEEeccchh----
Confidence            344689999    85 9999999999999986  79999877644321100    0000   00011122223332    


Q ss_pred             hhcCCcccEEEeCCCC--------------ChhhHHHHHHHHHhCCCC-EEEEec
Q 015746          147 VVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (401)
Q Consensus       147 ~~~~~~~d~Vv~~a~~--------------~~~~~~~ll~aa~~~gv~-~~v~~S  186 (401)
                      .+.++  |+||-++|.              |....+.++..+.+.+.+ .++.+|
T Consensus        84 ~~~~a--divvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          84 VSANS--KLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             GGTTE--EEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             hhccc--cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            33554  999999884              455566666666666654 344444

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.85  E-value=0.32  Score=44.84  Aligned_cols=111  Identities=16%  Similarity=0.160  Sum_probs=65.9

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchh--------------cCCC--e
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--------------SAGG--K  135 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~--------------~~~~--~  135 (401)
                      ...||||+    |+ |.+|..+++.|...|. ++++++.+.-....+.++-..+-.++.              .+.+  .
T Consensus        36 ~~~kVlvv----G~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~  110 (426)
T d1yovb1          36 DTCKVLVI----GA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVV  110 (426)
T ss_dssp             HHCCEEEE----CS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCE
T ss_pred             hcCeEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceE
Confidence            45799999    65 6699999999999997 788888766433333222111111111              1233  3


Q ss_pred             EEEcCH-hhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHh------------CCCCEEEEeccccccc
Q 015746          136 TVWGDP-AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS------------SGVKQFLFISSAGIYK  192 (401)
Q Consensus       136 ~~~~D~-~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~------------~gv~~~v~~SS~~vy~  192 (401)
                      .+..+. +.-...+.++  |+||.+.. |+..-..+-+.|..            .++ .+|..++.+.+|
T Consensus       111 ~~~~~i~~~~~~~~~~~--DlVi~~~D-n~~aR~~in~~c~~l~k~~~~~~~~~~~i-PlI~gg~~G~~G  176 (426)
T d1yovb1         111 PHFNKIQDFNDTFYRQF--HIIVCGLD-SIIARRWINGMLISLLNYEDGVLDPSSIV-PLIDGGTEGFKG  176 (426)
T ss_dssp             EECSCGGGBCHHHHTTC--SEEEECCS-CHHHHHHHHHHHHHTCCEETTEECGGGCC-CEEEEEEETTEE
T ss_pred             eeeccccchHHHHHHhc--chheeccC-cHHHHHHHHHHHHHhhcccccccccccCC-ceEEeEEeeeEE
Confidence            333332 2234556664  99998765 45555555556643            344 488887766554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.83  E-value=0.037  Score=44.08  Aligned_cols=40  Identities=18%  Similarity=0.185  Sum_probs=33.7

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~  116 (401)
                      ..+.+|+|.    |+ |-+|...+..+...|++|+++++++++.+
T Consensus        26 ~~g~~VlV~----Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~   65 (166)
T d1llua2          26 RPGQWVAIS----GI-GGLGHVAVQYARAMGLHVAAIDIDDAKLE   65 (166)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCCEEEEe----ec-cccHHHHHHHHHHcCCccceecchhhHHH
Confidence            346789999    86 88999999999999999999998876543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=92.71  E-value=0.055  Score=42.51  Aligned_cols=101  Identities=18%  Similarity=0.250  Sum_probs=59.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      .+||-|+    |+ |.+|+.++..|..++. ++..++++++........ ......+......+...+   ..+.+.++ 
T Consensus         3 ~~KI~II----Ga-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~D-l~~~~~~~~~~~~v~~~~---~~~~~~~a-   72 (150)
T d1t2da1           3 KAKIVLV----GS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALD-TSHTNVMAYSNCKVSGSN---TYDDLAGA-   72 (150)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHH-HHTHHHHHTCCCCEEEEC---CGGGGTTC-
T ss_pred             CCeEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecc-hhhhccccCCCcEEEecc---cccccCCC-
Confidence            4689999    85 9999999988877763 788888877554321100 000001111223333222   12344555 


Q ss_pred             ccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCCEEEEe
Q 015746          153 FDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       153 ~d~Vv~~a~~-------------------~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                       |+|+-+++.                   |....+.+++.+++.+.+-++.+
T Consensus        73 -dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv  123 (150)
T d1t2da1          73 -DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV  123 (150)
T ss_dssp             -SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             -cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence             999998883                   33456677777777776544433

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.58  E-value=0.073  Score=40.11  Aligned_cols=36  Identities=28%  Similarity=0.524  Sum_probs=32.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ..++|+|+     |.|++|-.++..|.+.|.+|+++.+.+.
T Consensus        29 ~~k~vvVi-----GgG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVI-----GSGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEE-----CChHHHHHHHHHhhccceEEEEEEecCc
Confidence            35799999     7899999999999999999999988764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=92.57  E-value=0.026  Score=45.95  Aligned_cols=40  Identities=18%  Similarity=0.202  Sum_probs=33.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSD  116 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~  116 (401)
                      ..+++|||.    | +|..|+.++..|.+.|. ++++..|+.++.+
T Consensus        16 l~~k~vlIl----G-aGGaarai~~al~~~g~~~i~i~nR~~~~~~   56 (182)
T d1vi2a1          16 IKGKTMVLL----G-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFD   56 (182)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHH
T ss_pred             cCCCEEEEE----C-CcHHHHHHHHHHhhcCCceEeeeccchHHHH
Confidence            456899999    5 47889999999999987 7888999886554

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.56  E-value=0.43  Score=37.98  Aligned_cols=95  Identities=16%  Similarity=0.205  Sum_probs=54.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCC-CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcC------------
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD------------  140 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D------------  140 (401)
                      |++|-|-     |-|.||+.+++.|++++ .+|+++.-..+...         ...+...+.......            
T Consensus         1 M~~VgIN-----GfGRIGR~v~R~l~~~~di~vvaInd~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~   66 (171)
T d1cf2o1           1 MKAVAIN-----GYGTVGKRVADAIAQQDDMKVIGVSKTRPDFE---------ARMALKKGYDLYVAIPERVKLFEKAGI   66 (171)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHHHTSSSEEEEEEEESSCSHH---------HHHHHHTTCCEEESSGGGHHHHHHTTC
T ss_pred             CeEEEEE-----cCcHHHHHHHHHHHhCCCceEEEEecCCcHHH---------HHHHHhcCCceEecccccceeecccCc
Confidence            5789999     58999999999998886 46666653222111         001111112222221            


Q ss_pred             --HhhHHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          141 --PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       141 --~~~~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                        ..++..++.+  +|+|+.|.|.... ..+ ++.-.+.|+ ++|+.|+
T Consensus        67 ~v~g~~~~~~~~--vDvViEcTG~f~~-~~~-~~~hl~~G~-K~vi~~~  110 (171)
T d1cf2o1          67 EVAGTVDDMLDE--ADIVIDCTPEGIG-AKN-LKMYKEKGI-KAIFQGG  110 (171)
T ss_dssp             CCCEEHHHHHHT--CSEEEECCSTTHH-HHH-HHHHHHTTC-EEEECTT
T ss_pred             ccCCChhHhhcC--CCEEEEccCCCCC-HHH-HHHHHHcCC-CEEEECC
Confidence              1123344455  4999999997432 223 444456787 4776665

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.26  E-value=0.4  Score=38.52  Aligned_cols=38  Identities=24%  Similarity=0.289  Sum_probs=33.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      ..+++|.|.     |.|-||+.+++.|..-|.+|++.+|....
T Consensus        40 l~gk~vgIi-----G~G~IG~~va~~l~~~g~~v~~~d~~~~~   77 (181)
T d1qp8a1          40 IQGEKVAVL-----GLGEIGTRVGKILAALGAQVRGFSRTPKE   77 (181)
T ss_dssp             CTTCEEEEE-----SCSTHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred             ccCceEEEe-----ccccccccceeeeeccccccccccccccc
Confidence            457899999     79999999999999999999999987643

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.17  E-value=0.099  Score=42.05  Aligned_cols=97  Identities=10%  Similarity=0.118  Sum_probs=59.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc--C----HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D----PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D----~~~~  144 (401)
                      ..+..|+|+    |+ |-+|...+..+...|. +|+++++++++.+..++           .+.+.+..  |    .+.+
T Consensus        28 ~~g~tVlI~----G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-----------~GA~~~in~~~~~~~~~~~   91 (176)
T d1d1ta2          28 KPGSTCVVF----GL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-----------VGATECISPKDSTKPISEV   91 (176)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------HTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----CC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-----------cCCcEEECccccchHHHHH
Confidence            345689999    75 9999999999999995 79999998876542211           13332221  1    3334


Q ss_pred             HHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      .+...+.++|+||.+.+... .....+..+.+ +-.++|+++
T Consensus        92 ~~~~~g~G~d~vi~~~g~~~-~~~~a~~~~~~-~~G~~v~vG  131 (176)
T d1d1ta2          92 LSEMTGNNVGYTFEVIGHLE-TMIDALASCHM-NYGTSVVVG  131 (176)
T ss_dssp             HHHHHTSCCCEEEECSCCHH-HHHHHHTTSCT-TTCEEEECS
T ss_pred             HHHhccccceEEEEeCCchH-HHHHHHHHhhc-CCeEEEEEE
Confidence            45555667899999987421 11222222222 223788776

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.07  E-value=0.11  Score=38.70  Aligned_cols=36  Identities=25%  Similarity=0.392  Sum_probs=32.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++|+|+     |.|++|-.++..|.+.|++|+++.|.+.-
T Consensus        21 p~~vvIi-----GgG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          21 PERVAVV-----GAGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEE-----CCChhhHHHHHHhhccccEEEEEeecchh
Confidence            3789999     78999999999999999999999998743

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.95  E-value=0.085  Score=39.41  Aligned_cols=35  Identities=29%  Similarity=0.359  Sum_probs=32.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      .++|+|+     |.|++|-.++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~Ii-----GgG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIV-----GSGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEE-----CCchHHHHHHHHHHhccccceeeehhcc
Confidence            4789999     7899999999999999999999999874

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.88  E-value=0.11  Score=40.73  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=30.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~  112 (401)
                      +++|.|.    |+||-||....+-+.+.  .++|.+++-..
T Consensus         2 pK~I~Il----GsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVL----GATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            5899999    99999999999988775  57898887655

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.77  E-value=0.08  Score=39.78  Aligned_cols=34  Identities=29%  Similarity=0.518  Sum_probs=31.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      .++|+|+     |.|++|-.++..|.+.|++|+++.|.+
T Consensus        32 ~~~vvIi-----GgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIII-----GGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEE-----ECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEE-----CCcHHHHHHHHHhhcccceEEEEeccc
Confidence            4789999     789999999999999999999998876

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.77  E-value=0.42  Score=39.02  Aligned_cols=40  Identities=20%  Similarity=0.167  Sum_probs=34.4

Q ss_pred             cccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        70 ~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      ....+++|.|+     |.|-||+.+++.|..-|.+|++.++....
T Consensus        41 ~~l~~ktvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~~   80 (199)
T d1dxya1          41 KELGQQTVGVM-----GTGHIGQVAIKLFKGFGAKVIAYDPYPMK   80 (199)
T ss_dssp             CCGGGSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             ccccceeeeee-----ecccccccccccccccceeeeccCCccch
Confidence            34557899999     89999999999999999999999986543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.68  E-value=0.098  Score=40.96  Aligned_cols=35  Identities=20%  Similarity=0.291  Sum_probs=30.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~  112 (401)
                      |++|.|.    |+||-||....+-+.+.  .++|.+++-+.
T Consensus         1 MK~I~Il----GsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTIL----GSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEE----cCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            6789999    99999999999988876  47888887655

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.60  E-value=0.29  Score=40.03  Aligned_cols=37  Identities=22%  Similarity=0.258  Sum_probs=32.9

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      ...+++|.|+     |.|.||+.+++.|..-|.+|.+.++..
T Consensus        40 el~gk~vgIi-----G~G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          40 EVRDQVVGVV-----GTGHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             CGGGSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCCeEEEe-----cccccchhHHHhHhhhcccccccCccc
Confidence            4567999999     899999999999999999999988655

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.52  E-value=0.11  Score=42.95  Aligned_cols=32  Identities=19%  Similarity=0.272  Sum_probs=26.4

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~  111 (401)
                      |||+|.    | ++-.|..+++.|+++|++|.++.-.
T Consensus         1 Mkiv~~----~-~~~~g~~~l~~L~~~g~~I~~Vvt~   32 (203)
T d2blna2           1 MKTVVF----A-YHDMGCLGIEALLAAGYEISAIFTH   32 (203)
T ss_dssp             CEEEEE----E-CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CeEEEE----e-cCHHHHHHHHHHHHCCCCEEEEEcC
Confidence            789999    5 4557999999999999999776543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.46  E-value=0.12  Score=38.58  Aligned_cols=36  Identities=31%  Similarity=0.398  Sum_probs=32.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++++|+     |.|+||-.++..|.+.|.+|+++.|...-
T Consensus        22 p~~i~Ii-----G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          22 PGKLGVI-----GAGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEE-----CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            4789999     78999999999999999999999988743

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.44  E-value=0.11  Score=39.25  Aligned_cols=35  Identities=26%  Similarity=0.345  Sum_probs=32.1

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      .++|+|+     |.|+||-.++..|.+.|.+|+++.|.+.
T Consensus        22 pk~vvIv-----GgG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIV-----GAGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEE-----cCCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            3799999     7899999999999999999999999874

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.35  E-value=0.45  Score=38.43  Aligned_cols=37  Identities=27%  Similarity=0.242  Sum_probs=32.9

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ...++|.|.     |.|.||+.+++.|..-|.+|.+.++...
T Consensus        42 l~~~~vgii-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          42 ARGKKLGII-----GYGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             STTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccceEEEEe-----ecccchhhhhhhcccccceEeecccccc
Confidence            457899999     8999999999999999999999987653

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.31  E-value=0.097  Score=44.00  Aligned_cols=34  Identities=32%  Similarity=0.443  Sum_probs=31.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      .+||+|+     |.|..|-..+..|.++|++|+++.|+.
T Consensus         6 ~~kVvVI-----GaGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVL-----GSGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEE-----CccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4689999     789999999999999999999999865

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.20  E-value=0.11  Score=39.69  Aligned_cols=36  Identities=17%  Similarity=0.399  Sum_probs=32.9

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++|+|+     |.|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        35 ~k~v~VI-----GgG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVI-----GGGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCEEEEE-----CCchHHHHHHHHHHhhCcceeeeeecccc
Confidence            5799999     78999999999999999999999998753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.18  E-value=0.092  Score=38.96  Aligned_cols=36  Identities=19%  Similarity=0.367  Sum_probs=32.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++++|+     |.|++|-.++..|.+.|++|+++.|.+.-
T Consensus        21 p~~vvIi-----GgG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVV-----GGGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEE-----CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            4789999     78999999999999999999999887743

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=91.18  E-value=0.19  Score=39.81  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=31.9

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r  110 (401)
                      ...+|+|+|+    |-+..+|+-++..|.++|..|+....
T Consensus        34 ~l~GK~v~VI----GrS~~VG~Pla~lL~~~gatVt~~h~   69 (166)
T d1b0aa1          34 DTFGLNAVVI----GASNIVGRPMSMELLLAGCTTTVTHR   69 (166)
T ss_dssp             CCTTCEEEEE----CCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred             ccccceEEEE----eccccccHHHHHHHHHhhcccccccc
Confidence            3457999999    99999999999999999999987754

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=90.98  E-value=0.59  Score=37.08  Aligned_cols=98  Identities=11%  Similarity=0.073  Sum_probs=60.9

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc----C--Hhh
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D--PAE  143 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D--~~~  143 (401)
                      .....+|+|.    |+ |-+|...+..+...|. +|+++++++++.+..+           .-+.+.+..    |  .+.
T Consensus        25 ~~~G~~VlV~----Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-----------~lGa~~~i~~~~~d~~~~~   88 (174)
T d1p0fa2          25 VTPGSTCAVF----GL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-----------ELGATECLNPKDYDKPIYE   88 (174)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHH
T ss_pred             CCCCCEEEEE----CC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-----------HcCCcEEEcCCCchhHHHH
Confidence            3446789999    86 8899999999999996 6888888876553221           224333321    2  334


Q ss_pred             HHHhhcCCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEec
Q 015746          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (401)
Q Consensus       144 ~~~~~~~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~S  186 (401)
                      ......+-++|+||.+.+.. ....+.+..++.. -.++++++
T Consensus        89 ~~~~~~~~G~d~vid~~g~~-~~~~~~~~~~~~~-~G~~v~vG  129 (174)
T d1p0fa2          89 VICEKTNGGVDYAVECAGRI-ETMMNALQSTYCG-SGVTVVLG  129 (174)
T ss_dssp             HHHHHTTSCBSEEEECSCCH-HHHHHHHHTBCTT-TCEEEECC
T ss_pred             HHHHhcCCCCcEEEEcCCCc-hHHHHHHHHHHHh-cCceEEEE
Confidence            44445555689999998742 2333333333332 23677666

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.93  E-value=0.11  Score=39.02  Aligned_cols=34  Identities=32%  Similarity=0.388  Sum_probs=30.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      .+++.|+     |.|+||-.++..|.+.|.+|+++.|++
T Consensus        20 P~~vvII-----GgG~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          20 PGKTLVV-----GASYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCSEEEE-----CCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCeEEEE-----CCCccHHHHHHHHhhcCCeEEEEEech
Confidence            4689999     789999999999999999999998753

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.85  E-value=0.069  Score=43.22  Aligned_cols=89  Identities=11%  Similarity=0.116  Sum_probs=54.7

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC-CCeEEEE-ecCCCCcccCCCCCCCcccchhc-CCCeEEEcCHhhHHHhhcCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~  151 (401)
                      +||.|+    | .|.+|+..++.|... +.+|+++ +++.++......       .... ....+    .+++++++++.
T Consensus         2 iki~iI----G-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~ll~~~   65 (184)
T d1ydwa1           2 IRIGVM----G-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFAT-------ANNYPESTKI----HGSYESLLEDP   65 (184)
T ss_dssp             EEEEEE----S-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH-------HTTCCTTCEE----ESSHHHHHHCT
T ss_pred             eEEEEE----c-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchh-------ccccccceee----cCcHHHhhhcc
Confidence            689999    6 689999999999876 5687765 455443322110       0000 01111    23456666666


Q ss_pred             cccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 015746          152 TFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (401)
Q Consensus       152 ~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv  179 (401)
                      .+|+|+-+..                         .+......+++.+++.++
T Consensus        66 ~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          66 EIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             TCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             ccceeeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            6788885543                         256777788888877776

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.49  E-value=0.094  Score=40.92  Aligned_cols=35  Identities=23%  Similarity=0.557  Sum_probs=30.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~  111 (401)
                      .++++|||+    || |.+|..-++.|++.|.+|++++-.
T Consensus        11 l~gkrvLVi----Gg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLI----GG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEE----EE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            457999999    65 899999999999999999999643

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=90.45  E-value=0.49  Score=34.98  Aligned_cols=80  Identities=19%  Similarity=0.191  Sum_probs=53.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .+||||+    =-.-.+...+...|...||+|.....+.                             +.+..+.+...+
T Consensus         2 p~rILvV----dDd~~~~~~l~~~L~~~g~~v~~~~~~~-----------------------------~al~~l~~~~~~   48 (118)
T d2b4aa1           2 PFRVTLV----EDEPSHATLIQYHLNQLGAEVTVHPSGS-----------------------------AFFQHRSQLSTC   48 (118)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESSHH-----------------------------HHHHTGGGGGSC
T ss_pred             CCEEEEE----ECCHHHHHHHHHHHHhcCCCeEEECCHH-----------------------------HHHHHHHhcCCC
Confidence            4789999    9999999999999999999987654332                             334444444457


Q ss_pred             cEEEeCCC-CChhhHHHHHHHHHhCCC-CEEEEecc
Q 015746          154 DVVLDNNG-KNLDAVRPVADWAKSSGV-KQFLFISS  187 (401)
Q Consensus       154 d~Vv~~a~-~~~~~~~~ll~aa~~~gv-~~~v~~SS  187 (401)
                      |+|+--.. ....|. .+++.+++.+. -.+|++|+
T Consensus        49 dliilD~~lp~~~G~-el~~~ir~~~~~~pii~lt~   83 (118)
T d2b4aa1          49 DLLIVSDQLVDLSIF-SLLDIVKEQTKQPSVLILTT   83 (118)
T ss_dssp             SEEEEETTCTTSCHH-HHHHHHTTSSSCCEEEEEES
T ss_pred             CEEEEeCCCCCCCHH-HHHHHHHhcCCCCcEEEEEC
Confidence            88884322 223333 55666666542 25788875

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.21  E-value=0.66  Score=35.26  Aligned_cols=107  Identities=16%  Similarity=0.130  Sum_probs=67.4

Q ss_pred             ccCeEEEEecCCCcc---ccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhc
Q 015746           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (401)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~  149 (401)
                      ..++|.|+    |++   +-.|..+++.|++.||+++.+.-+... ..           +.  +..+    ..++.++-.
T Consensus        12 ~pksIAVV----GaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~-----------i~--g~~~----~~~l~~i~~   69 (136)
T d1iuka_          12 QAKTIAVL----GAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EE-----------LF--GEEA----VASLLDLKE   69 (136)
T ss_dssp             HCCEEEEE----TCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SE-----------ET--TEEC----BSSGGGCCS
T ss_pred             CCCeEEEE----eecCCCCCchHHHHHHHhcCCCCceEEEecccc-ce-----------ee--ceec----ccchhhccC
Confidence            35789999    998   668999999999999998876544321 10           00  1111    111222222


Q ss_pred             CCcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEecccccccCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCCeE
Q 015746          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (401)
Q Consensus       150 ~~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~SS~~vy~~~~~~~~~E~~~~~~~~~~~~~ek~~~e~g~~~~  226 (401)
                        .+|.|+-+..  -..+..+++.|.+.|++.+++-+.  +                   ..-.+.+++++.|++++
T Consensus        70 --~iD~v~v~~p--~~~v~~~v~~~~~~g~k~i~~q~G--~-------------------~~~e~~~~a~~~Gi~vV  121 (136)
T d1iuka_          70 --PVDILDVFRP--PSALMDHLPEVLALRPGLVWLQSG--I-------------------RHPEFEKALKEAGIPVV  121 (136)
T ss_dssp             --CCSEEEECSC--HHHHTTTHHHHHHHCCSCEEECTT--C-------------------CCHHHHHHHHHTTCCEE
T ss_pred             --CCceEEEecc--HHHHHHHHHHHHhhCCCeEEEecC--c-------------------cCHHHHHHHHHcCCEEE
Confidence              3588877653  566777888888889876554221  1                   11246788888898755

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.18  E-value=0.41  Score=38.03  Aligned_cols=38  Identities=18%  Similarity=0.253  Sum_probs=33.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      ...+++|+|+    |-+..+|+-++..|+++|..|+......
T Consensus        36 ~l~Gk~vvVI----GrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVV----GRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEE----CCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEE----ecCCccchHHHHHHHhccCceEEEeccc
Confidence            3467999999    9999999999999999999999876544

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.94  E-value=0.15  Score=43.03  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=32.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      +..+||+|+     |.|..|..++..|.++|++|+++.|.+.
T Consensus         2 ~~~~kV~Ii-----GaG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVV-----GGSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEE-----CcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            346899999     7899999999999999999999988664

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.85  E-value=0.2  Score=40.39  Aligned_cols=39  Identities=31%  Similarity=0.465  Sum_probs=34.3

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      ....++|+|+     |.|..|-..+..|.++||+|+++.+.+.-
T Consensus        40 ~~~~k~V~II-----GaGPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          40 AVQKKNLAVV-----GAGPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             CSSCCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCCcEEEEE-----CccHHHHHHHHHHHhhccceEEEeccCcc
Confidence            3446899999     78999999999999999999999987743

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=89.21  E-value=0.077  Score=42.56  Aligned_cols=41  Identities=15%  Similarity=0.151  Sum_probs=33.8

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCccc
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~  117 (401)
                      ..+++|+|.    | +|..++.++..|.+.+-+|+++.|+.++...
T Consensus        16 ~~~k~vlIl----G-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~   56 (171)
T d1p77a1          16 RPNQHVLIL----G-AGGATKGVLLPLLQAQQNIVLANRTFSKTKE   56 (171)
T ss_dssp             CTTCEEEEE----C-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEE----C-CcHHHHHHHHHHcccCceeeeccchHHHHHH
Confidence            356899999    4 5667999999999988899999999866543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=89.05  E-value=0.24  Score=40.63  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=50.2

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ...+++|.|-     |-|.+|+++++.|.+.|.+|++.+.+.....           .....+.+.+  +.+   +++. 
T Consensus        24 ~L~gk~v~Iq-----G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~-----------~~~~~g~~~~--~~~---~~~~-   81 (201)
T d1c1da1          24 SLDGLTVLVQ-----GLGAVGGSLASLAAEAGAQLLVADTDTERVA-----------HAVALGHTAV--ALE---DVLS-   81 (201)
T ss_dssp             CSTTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHH-----------HHHHTTCEEC--CGG---GGGG-
T ss_pred             CCCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEecchHHHHH-----------HHHhhccccc--Ccc---cccc-
Confidence            4567999999     6999999999999999999998876553322           1222233333  222   2333 


Q ss_pred             CcccEEEeCCCCChhhH
Q 015746          151 VTFDVVLDNNGKNLDAV  167 (401)
Q Consensus       151 ~~~d~Vv~~a~~~~~~~  167 (401)
                      .++|+++-||..+....
T Consensus        82 ~~~DI~iPcA~~~~I~~   98 (201)
T d1c1da1          82 TPCDVFAPCAMGGVITT   98 (201)
T ss_dssp             CCCSEEEECSCSCCBCH
T ss_pred             ccceeeecccccccccH
Confidence            24699999987665433

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.96  E-value=0.18  Score=37.86  Aligned_cols=37  Identities=27%  Similarity=0.413  Sum_probs=33.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~  115 (401)
                      .++++|+     |.|+||-.++..|.+.|.+|+++.|.+.-.
T Consensus        25 p~~~vii-----G~G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          25 PKKLVVI-----GAGYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             CSEEEES-----CCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             CCeEEEE-----ccchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            4789999     789999999999999999999999988543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.92  E-value=0.19  Score=44.28  Aligned_cols=35  Identities=37%  Similarity=0.620  Sum_probs=32.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      +|+|+|+     |+|.-|-.+|..|.++|++|.++-++..
T Consensus         2 ~KKI~II-----GaG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIV-----GAGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEE-----CCcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            6899999     7899999999999999999999987764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=88.51  E-value=0.26  Score=36.49  Aligned_cols=36  Identities=11%  Similarity=0.155  Sum_probs=32.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++|+|+     |.|++|-.++..|...|.+|+++.|.+.-
T Consensus        22 ~~~vvVv-----GgG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          22 GSTVVVV-----GGSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCEEEEE-----CCCHHHHHHHHHHHhcchhheEeeccchh
Confidence            5899999     78999999999999999999999987743

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.37  E-value=0.2  Score=40.20  Aligned_cols=35  Identities=20%  Similarity=0.239  Sum_probs=31.4

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDE  113 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~  113 (401)
                      ++||+|+     |.|..|-..|..|.++|+ +|+++.|.+.
T Consensus         4 ~~kVaII-----GaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALL-----GAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEE-----CCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEE-----CChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            5899999     789999999999999998 5999988763

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.29  E-value=0.17  Score=43.10  Aligned_cols=31  Identities=19%  Similarity=0.401  Sum_probs=29.3

Q ss_pred             EEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      |+|+     |.|.+|..++.+|.++|++|+++.++.
T Consensus         7 vvII-----GaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVI-----GGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEE-----CcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            9999     789999999999999999999999865

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.20  E-value=0.21  Score=37.56  Aligned_cols=36  Identities=22%  Similarity=0.385  Sum_probs=32.5

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      .++++|+     |.|+||-.++..|.+.|.+|+++.+.+.-
T Consensus        26 p~~vvIi-----GgG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          26 PGKLLII-----GGGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             CSEEEEE-----SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEE-----CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            4799999     78999999999999999999999987743

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.53  E-value=0.33  Score=37.70  Aligned_cols=36  Identities=36%  Similarity=0.461  Sum_probs=29.6

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      .+.|+|.-   .|.||||..++..|.++|++|+++.+.+
T Consensus        39 ~~~vvi~d---~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILN---ADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEE---CCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEe---cCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            45555540   4779999999999999999999999876

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.35  E-value=0.3  Score=42.26  Aligned_cols=37  Identities=35%  Similarity=0.621  Sum_probs=32.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ...++|+|+     |.|..|-..+..|.++|++|+++.+.+.
T Consensus        28 ~~pkkV~II-----GaG~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          28 SNPKHVVIV-----GAGMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SSCCEEEEE-----CCBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCeEEEE-----CCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            345899999     7899999999999999999999987663

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.23  E-value=0.22  Score=42.39  Aligned_cols=34  Identities=21%  Similarity=0.421  Sum_probs=30.5

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      |+|+|+     |+|.-|-..+.+|.++|++|+++-+.+.
T Consensus         1 m~V~II-----GaG~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVV-----GGGISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEE-----CCBHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEE-----CCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            689999     5599999999999999999999988663

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.04  E-value=0.63  Score=38.03  Aligned_cols=33  Identities=24%  Similarity=0.320  Sum_probs=27.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      |||++.     |++..|..+++.|+++||+|.++...+
T Consensus         1 MkI~~~-----G~~~~~~~~l~~L~~~~~~i~~V~t~p   33 (203)
T d2bw0a2           1 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVP   33 (203)
T ss_dssp             CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CEEEEE-----cCCHHHHHHHHHHHHCCCcEEEEEcCC
Confidence            789999     567889999999999999998766433

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=86.77  E-value=1.3  Score=35.03  Aligned_cols=90  Identities=18%  Similarity=0.240  Sum_probs=52.5

Q ss_pred             ccCeEEEEecCCCccccchHHH-HHHHHhCC--CeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhh
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYL-AKELLGSG--HEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l-~~~Ll~~g--~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~  148 (401)
                      .++||.|+    | +|.+|+.+ +..+.+.+  .+|+++ +++.++...        +....  +...+.   +++++++
T Consensus         2 kkirigiI----G-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~--------~~~~~--~~~~~~---~~~~ell   63 (181)
T d1zh8a1           2 RKIRLGIV----G-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEE--------FAKMV--GNPAVF---DSYEELL   63 (181)
T ss_dssp             CCEEEEEE----C-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHH--------HHHHH--SSCEEE---SCHHHHH
T ss_pred             CCcEEEEE----c-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhh--------hhccc--ccccee---eeeeccc
Confidence            34689999    5 79999864 66666543  466655 454433321        11111  222233   3355566


Q ss_pred             cCCcccEEEeCCC-------------------------CChhhHHHHHHHHHhCCCC
Q 015746          149 GGVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       149 ~~~~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv~  180 (401)
                      ++..+|+|+-+..                         .+......+++++++.++.
T Consensus        64 ~~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          64 ESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             HSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             cccccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence            6656788875544                         2567777788888777753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=86.63  E-value=0.29  Score=41.65  Aligned_cols=34  Identities=29%  Similarity=0.405  Sum_probs=31.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      .|||+|+     |.|.-|-..+.+|.++|++|+++.+.+
T Consensus         1 ~KkV~II-----GaG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVI-----GAGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3799999     789999999999999999999998765

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=86.59  E-value=0.12  Score=41.12  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=33.1

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcc
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSD  116 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~  116 (401)
                      .+++|||.    | +|..++.++..|.+.|. +|+++.|+.++..
T Consensus        16 ~~~~vlIl----G-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~   55 (167)
T d1npya1          16 KNAKVIVH----G-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQ   55 (167)
T ss_dssp             TTSCEEEE----C-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHH
T ss_pred             CCCeEEEE----C-CCHHHHHHHHHHHHCCCCEEEEecccHHHHH
Confidence            46789999    5 58999999999999996 7999999886544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.56  E-value=0.28  Score=38.68  Aligned_cols=68  Identities=18%  Similarity=0.240  Sum_probs=48.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~  151 (401)
                      ..+|+|.|.     |.|.||+.+++.|...|.+|.+...++-+.          +... ..+.++     ..+++++...
T Consensus        22 l~Gk~v~V~-----GyG~iG~g~A~~~rg~G~~V~v~e~dp~~a----------l~A~-~dG~~v-----~~~~~a~~~a   80 (163)
T d1li4a1          22 IAGKVAVVA-----GYGDVGKGCAQALRGFGARVIITEIDPINA----------LQAA-MEGYEV-----TTMDEACQEG   80 (163)
T ss_dssp             CTTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCEE-----CCHHHHTTTC
T ss_pred             ecCCEEEEe-----ccccccHHHHHHHHhCCCeeEeeecccchh----------HHhh-cCceEe-----eehhhhhhhc
Confidence            356899999     899999999999999999999999877322          1111 123332     2355666665


Q ss_pred             cccEEEeCCCC
Q 015746          152 TFDVVLDNNGK  162 (401)
Q Consensus       152 ~~d~Vv~~a~~  162 (401)
                        |+||-+.|.
T Consensus        81 --divvtaTGn   89 (163)
T d1li4a1          81 --NIFVTTTGC   89 (163)
T ss_dssp             --SEEEECSSC
T ss_pred             --cEEEecCCC
Confidence              999888774

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=86.48  E-value=0.28  Score=33.51  Aligned_cols=36  Identities=22%  Similarity=0.218  Sum_probs=32.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~  114 (401)
                      +|+|.|.     |+|.+|+-++.....-|++|++++-+.+.
T Consensus         1 ~k~vgIl-----G~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVL-----GNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEE-----BCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEE-----cCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            5789999     78999999999999999999999976643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=86.47  E-value=0.98  Score=35.44  Aligned_cols=75  Identities=15%  Similarity=0.174  Sum_probs=47.5

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEc--C----HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D----PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D----~~~~  144 (401)
                      ....+|+|+    |+.| +|...+..+...|. .|+++++.+++.+..           ..-+.+.+..  +    .+..
T Consensus        27 k~g~~VlI~----G~Gg-~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-----------~~~GAd~~in~~~~~~~~~~~   90 (175)
T d1cdoa2          27 EPGSTCAVF----GLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-----------KVFGATDFVNPNDHSEPISQV   90 (175)
T ss_dssp             CTTCEEEEE----CCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHTTCCEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----ecCC-ccchHHHHHHHHhhchheeecchHHHHHHH-----------HHcCCcEEEcCCCcchhHHHH
Confidence            345789999    8755 77777777777765 688888887655422           2223322221  1    2444


Q ss_pred             HHhhcCCcccEEEeCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK  162 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~  162 (401)
                      .....+.++|+|+.+.|.
T Consensus        91 ~~~~~~~G~d~vid~~G~  108 (175)
T d1cdoa2          91 LSKMTNGGVDFSLECVGN  108 (175)
T ss_dssp             HHHHHTSCBSEEEECSCC
T ss_pred             HHhhccCCcceeeeecCC
Confidence            555555568999999884

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=85.71  E-value=0.45  Score=38.66  Aligned_cols=38  Identities=16%  Similarity=0.085  Sum_probs=33.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ...+++|.|+     |.|-||+.+++.|..-|.+|.+.++...
T Consensus        46 eL~gktvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          46 RIRGETLGII-----GLGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeCceEEEe-----ccccccccceeeeeccccceeeccCccc
Confidence            3457899999     8999999999999999999999988654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=85.62  E-value=0.88  Score=35.71  Aligned_cols=75  Identities=15%  Similarity=0.130  Sum_probs=45.2

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCC-eEEEEecCCCCcccCCCCCCCcccchhcCCCeEEE-c-C----HhhH
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-D----PAEV  144 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-D----~~~~  144 (401)
                      ..+.+|||.    |+. .+|...+..+...|. .|++.++++++.+..+        ++   +.+.+. . +    ....
T Consensus        27 ~~G~tVlI~----GaG-GvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak--------~l---Ga~~~i~~~~~~~~~~~~   90 (176)
T d2fzwa2          27 EPGSVCAVF----GLG-GVGLAVIMGCKVAGASRIIGVDINKDKFARAK--------EF---GATECINPQDFSKPIQEV   90 (176)
T ss_dssp             CTTCEEEEE----CCS-HHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH--------HH---TCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEe----cch-hHHHHHHHHHHHHhcCceEEEcccHHHHHHHH--------Hh---CCcEEEeCCchhhHHHHH
Confidence            345789999    885 589999999999996 5666666655443211        11   222221 1 1    2222


Q ss_pred             HHhhcCCcccEEEeCCCC
Q 015746          145 GNVVGGVTFDVVLDNNGK  162 (401)
Q Consensus       145 ~~~~~~~~~d~Vv~~a~~  162 (401)
                      .+...+.++|+||++.|.
T Consensus        91 ~~~~~~~g~D~vid~~G~  108 (176)
T d2fzwa2          91 LIEMTDGGVDYSFECIGN  108 (176)
T ss_dssp             HHHHTTSCBSEEEECSCC
T ss_pred             HHHHcCCCCcEeeecCCC
Confidence            333344468999999874

>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein YNL200c (YNU0 YEAST)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.82  E-value=0.22  Score=42.23  Aligned_cols=100  Identities=10%  Similarity=0.036  Sum_probs=59.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCcc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~  153 (401)
                      .++|+|. .|+|-+|.=|..++++|..+|++|.++...........   ...+..+...++.+...+...........++
T Consensus        55 ~~~vlil-~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (243)
T d1jzta_          55 GKHVFVI-AGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFY---KQLVHQLNFFKVPVLSQDEGNWLEYLKPEKT  130 (243)
T ss_dssp             TCEEEEE-ECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHH---HHHHHHHHHTTCCEECSSTTCGGGGGSTTTE
T ss_pred             CCeEEEE-ECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHH---HHHHHHHHHCCCceecccccchhhccccccc
Confidence            4678887 68888999999999999999999988765543221110   0112223334555554443333333333456


Q ss_pred             cEEEeCC-CC-----ChhhHHHHHHHHHhC
Q 015746          154 DVVLDNN-GK-----NLDAVRPVADWAKSS  177 (401)
Q Consensus       154 d~Vv~~a-~~-----~~~~~~~ll~aa~~~  177 (401)
                      |+||++. |.     --.....+++++.+.
T Consensus       131 d~iVDal~G~Gl~~~l~~~~~~li~~iN~~  160 (243)
T d1jzta_         131 LCIVDAIFGFSFKPPMREPFKGIVEELCKV  160 (243)
T ss_dssp             EEEEEESCCTTCCSSCCTTHHHHHHHHHHH
T ss_pred             cEEEEeeecccccCcccHHHHHHHHHHHHh
Confidence            8888742 11     123456677777654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.52  E-value=0.52  Score=39.16  Aligned_cols=37  Identities=32%  Similarity=0.425  Sum_probs=33.0

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ...++|+|+     |.|..|-..+..|.++|++|+++.+...
T Consensus        47 ~~~k~VvII-----GaGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIV-----GAGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEE-----cccHHHHHHHHHHHHhccceeeEeeccc
Confidence            456899999     7899999999999999999999987664

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=84.32  E-value=2  Score=33.38  Aligned_cols=100  Identities=10%  Similarity=0.067  Sum_probs=50.9

Q ss_pred             CeEEEEecCCCccccchHH-HHHHHHhC-CCeEEEEecCCCCcccCCC-----CCCCcccchhcCCCeEEEcC------H
Q 015746           75 KKVLIVNTNSGGHAVIGFY-LAKELLGS-GHEVTIMTVGDENSDKMKK-----PPFNRFNEIVSAGGKTVWGD------P  141 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~-l~~~Ll~~-g~~V~~~~r~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~D------~  141 (401)
                      +||.|+    | .|.+|+. .+..|... +.++++++++++....+..     .....+.++..++++.+..-      .
T Consensus         2 irvgii----G-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~~H~   76 (167)
T d1xeaa1           2 LKIAMI----G-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHS   76 (167)
T ss_dssp             EEEEEE----C-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHH
T ss_pred             eEEEEE----c-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceecccccccccc
Confidence            689999    5 6788865 45555555 4577766666544332110     01112222222233222221      1


Q ss_pred             hhHHHhhcCCcccEEEe-CCCCChhhHHHHHHHHHhCCCC
Q 015746          142 AEVGNVVGGVTFDVVLD-NNGKNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       142 ~~~~~~~~~~~~d~Vv~-~a~~~~~~~~~ll~aa~~~gv~  180 (401)
                      +-...+++. +.++++- -.+.+......+++++++.|+.
T Consensus        77 ~~~~~al~~-gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          77 TLAAFFLHL-GIPTFVDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             HHHHHHHHT-TCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             ccccccccc-ccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            222222221 2243332 2335788888999999988864

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.15  E-value=0.4  Score=37.50  Aligned_cols=34  Identities=29%  Similarity=0.310  Sum_probs=29.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCC--eEEEEecCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGD  112 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~~~r~~  112 (401)
                      .|||+|+     |.|++|-.++..|.+.++  +|+++.+.+
T Consensus         2 gkrivIv-----GgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVV-----GGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEE-----CccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            5899999     789999999999999886  677776654

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.85  E-value=1.5  Score=34.40  Aligned_cols=86  Identities=13%  Similarity=0.122  Sum_probs=50.3

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .+++|.|+    | .|.+|+..++.|.+..  ..+.+.+....+...       ...     ...     ..++++++.+
T Consensus         6 ~k~kv~iI----G-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~-----~~~-----~~~~~e~l~~   63 (172)
T d1lc0a1           6 GKFGVVVV----G-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG-------SLD-----EVR-----QISLEDALRS   63 (172)
T ss_dssp             CSEEEEEE----C-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC-------EET-----TEE-----BCCHHHHHHC
T ss_pred             CCcEEEEE----c-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHHH-------Hhh-----ccC-----cCCHHHHHhC
Confidence            35789999    5 6999999888877542  123333322211100       000     111     1135556666


Q ss_pred             CcccEEEeCCC-------------------------CChhhHHHHHHHHHhCCCC
Q 015746          151 VTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       151 ~~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv~  180 (401)
                      .++|+|+-+..                         .++.....+++++++.|+.
T Consensus        64 ~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~  118 (172)
T d1lc0a1          64 QEIDVAYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV  118 (172)
T ss_dssp             SSEEEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred             CCcchhhhcccccccccccccccccchhhhcCCCccccHHHHHHHHHHHHHcCCe
Confidence            66777775443                         3678888899999888863

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.36  E-value=0.34  Score=39.09  Aligned_cols=38  Identities=24%  Similarity=0.148  Sum_probs=32.5

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ...++++.|+     |.|.||+.+++.|..-|.+|.+.++...
T Consensus        41 ~l~~k~vgii-----G~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          41 EIFGKTVGVV-----GLGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cccceeeeec-----cccchhHHHHHHhhhccceEEeecCCCC
Confidence            3456889999     6999999999999999999999987653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=83.30  E-value=0.8  Score=36.81  Aligned_cols=37  Identities=16%  Similarity=0.055  Sum_probs=32.6

Q ss_pred             cccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ...++|.|+     |.|.||+.+++.|..-|.+|.+.++...
T Consensus        42 l~~~~vgii-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          42 LEAMHVGTV-----AAGRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CTTCEEEEE-----CCSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             ccccceeec-----cccccchhhhhhhhccCceEEEEeeccc
Confidence            456899999     7999999999999999999999998653

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=83.21  E-value=0.63  Score=37.24  Aligned_cols=104  Identities=13%  Similarity=0.110  Sum_probs=64.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhc---C------------CCeEEE
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS---A------------GGKTVW  138 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~---~------------~~~~~~  138 (401)
                      .-+|+|.     |.|..|.+-++....-|.+|++++.+....+.+..... +|-.+..   .            .-++..
T Consensus        29 pa~VvVi-----GaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~-~~i~~~~~~~~~~~~~~gyA~~~s~~~~~  102 (183)
T d1l7da1          29 PARVLVF-----GVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG-KFITVDDEAMKTAETAGGYAKEMGEEFRK  102 (183)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC-EECCC-----------------------C
T ss_pred             CcEEEEE-----cCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc-ceEEEeccccccccccccchhhcCHHHHH
Confidence            4589999     68999999999999999999999998876554322110 0000000   0            001111


Q ss_pred             cCHhhHHHhhcCCcccEEEeCCCC-----ChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          139 GDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       139 ~D~~~~~~~~~~~~~d~Vv~~a~~-----~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      ...+.+.+.+..+  |+||-.+-+     +..-++.+++.++.-.+  +|=++.
T Consensus       103 ~~~~~l~~~l~~a--DlVI~talipG~~aP~lit~~mv~~Mk~GSV--IVDvai  152 (183)
T d1l7da1         103 KQAEAVLKELVKT--DIAITTALIPGKPAPVLITEEMVTKMKPGSV--IIDLAV  152 (183)
T ss_dssp             CHHHHHHHHHTTC--SEEEECCCCTTSCCCCCSCHHHHTTSCTTCE--EEETTG
T ss_pred             HHHHHHHHHHHhh--hhheeeeecCCcccceeehHHHHHhcCCCcE--EEEEee
Confidence            2245666777776  999977653     34456667776655543  555553

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=83.12  E-value=0.23  Score=40.44  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=33.1

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      ...+++|.|+     |.|.||+.+++.|..-|.+|.+.++...
T Consensus        44 ~l~g~tvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          44 KLDNKTLGIY-----GFGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             eecccceEEe-----ecccchHHHHHHHHhhcccccccccccc
Confidence            3457899999     8999999999999999999999887654

>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: TorCAD operon transcriptional regulator TorD, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.08  E-value=3.4  Score=29.94  Aligned_cols=78  Identities=12%  Similarity=0.194  Sum_probs=51.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      +||||+    =-.-.+...+...|.+.||+|....                              |.++..+.+...+||
T Consensus         2 ~rILiV----DDd~~~~~~l~~~L~~~g~~v~~a~------------------------------~~~~a~~~~~~~~~d   47 (120)
T d1zgza1           2 HHIVIV----EDEPVTQARLQSYFTQEGYTVSVTA------------------------------SGAGLREIMQNQSVD   47 (120)
T ss_dssp             CEEEEE----CSSHHHHHHHHHHHHHTTCEEEEES------------------------------SHHHHHHHHHHSCCS
T ss_pred             CEEEEE----eCCHHHHHHHHHHHHHCCCEEEEEC------------------------------CHHHHHHHHHhcCCC
Confidence            689999    8899999999999999999986532                              223344445555689


Q ss_pred             EEEeCC-CCChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          155 VVLDNN-GKNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       155 ~Vv~~a-~~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      +|+--. -....+. .+++..+......+|++|+
T Consensus        48 liilD~~mp~~~g~-~~~~~~~~~~~~piI~lt~   80 (120)
T d1zgza1          48 LILLDINLPDENGL-MLTRALRERSTVGIILVTG   80 (120)
T ss_dssp             EEEEESCCSSSCHH-HHHHHHHTTCCCEEEEEES
T ss_pred             EEeeehhhccchhH-HHHHHHhccCCCeEEEEEc
Confidence            888322 2223343 3456666555446888775

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.04  E-value=1.4  Score=34.79  Aligned_cols=82  Identities=16%  Similarity=0.082  Sum_probs=50.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ...+|+|+|+    |-+.-+|+-++..|+++|..|+........... +... .......  -..+.....+.+.+....
T Consensus        26 ~l~GK~vvVI----GrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~-~~~~-~~~~~~~--~~~~~~~~~~~lk~~~~~   97 (171)
T d1edza1          26 RLYGKKCIVI----NRSEIVGRPLAALLANDGATVYSVDVNNIQKFT-RGES-LKLNKHH--VEDLGEYSEDLLKKCSLD   97 (171)
T ss_dssp             TTTTCEEEEE----CCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE-SCCC-SSCCCCE--EEEEEECCHHHHHHHHHH
T ss_pred             CCCCCEEEEE----CCccccHHHHHHHHHHCCCEEEEeccccccccc-cccc-eeeeeec--cccccccchhHHhhcccc
Confidence            4568999999    999999999999999999999877644311000 0000 0000000  001112235667777666


Q ss_pred             CcccEEEeCCCC
Q 015746          151 VTFDVVLDNNGK  162 (401)
Q Consensus       151 ~~~d~Vv~~a~~  162 (401)
                      .  |+||...|.
T Consensus        98 a--DIvIsavG~  107 (171)
T d1edza1          98 S--DVVITGVPS  107 (171)
T ss_dssp             C--SEEEECCCC
T ss_pred             C--CEEEEccCC
Confidence            5  999988775

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.85  E-value=1.4  Score=32.14  Aligned_cols=36  Identities=25%  Similarity=0.275  Sum_probs=28.0

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHH---hCCCeEEEEecCCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELL---GSGHEVTIMTVGDEN  114 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll---~~g~~V~~~~r~~~~  114 (401)
                      .++|+|+    | .|++|-.++..|.   .+|.+|+++.|.+.-
T Consensus        20 p~~v~iv----G-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~i   58 (117)
T d1aoga2          20 PRRVLTV----G-GGFISVEFAGIFNAYKPKDGQVTLCYRGEMI   58 (117)
T ss_dssp             CSEEEEE----C-SSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred             CCeEEEE----C-CcHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence            4789999    5 5999999996554   456789999987643

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=82.78  E-value=1  Score=36.71  Aligned_cols=35  Identities=23%  Similarity=0.292  Sum_probs=28.2

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      ..|||++.    | ++..+..+.+.|++.|++|.++...+
T Consensus         2 ~~mKI~f~----G-~~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           2 ESLRIIFA----G-TPDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCCEEEEE----E-CSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCcEEEEE----C-CCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            35899999    4 67889999999999999987765443

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=82.70  E-value=7.7  Score=28.94  Aligned_cols=88  Identities=13%  Similarity=0.150  Sum_probs=55.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHh-CCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCc
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~  152 (401)
                      .++|+|+... |=.=-+|..++..+++ .||+|+-+..+.                           -.+++.++....+
T Consensus         3 k~kVvi~~~~-gD~H~lG~~mva~~l~~~G~~V~~LG~~~---------------------------p~e~iv~a~~~~~   54 (137)
T d1ccwa_           3 KKTIVLGVIG-SDCHAVGNKILDHAFTNAGFNVVNIGVLS---------------------------PQELFIKAAIETK   54 (137)
T ss_dssp             CCEEEEEEET-TCCCCHHHHHHHHHHHHTTCEEEEEEEEE---------------------------CHHHHHHHHHHHT
T ss_pred             CCEEEEEecC-CChhHHHHHHHHHHHHHCCCeEEeccccc---------------------------CHHHHHHHHHhcC
Confidence            4677775111 1122468887777765 599998776543                           2466666666667


Q ss_pred             ccEEEeC--CCCChhhHHHHHHHHHhCCCC-EEEEecccc
Q 015746          153 FDVVLDN--NGKNLDAVRPVADWAKSSGVK-QFLFISSAG  189 (401)
Q Consensus       153 ~d~Vv~~--a~~~~~~~~~ll~aa~~~gv~-~~v~~SS~~  189 (401)
                      +|+|.-.  .+.+....+.+++.+++.+.+ --|+++...
T Consensus        55 ~d~v~lS~~~~~~~~~~~~~~~~l~~~~~~~i~iivGG~~   94 (137)
T d1ccwa_          55 ADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNI   94 (137)
T ss_dssp             CSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESC
T ss_pred             CCEEEEeeccccchHHHHHHHHHHHHhccCCCEEEEeCCc
Confidence            8988743  344567778888888887653 345566433

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=82.60  E-value=2.1  Score=31.17  Aligned_cols=32  Identities=31%  Similarity=0.349  Sum_probs=26.7

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~  109 (401)
                      ++||||+    =-.-.+-..+...|.+.||+|....
T Consensus         1 GkrILiv----DD~~~~~~~l~~~L~~~g~~v~~~a   32 (118)
T d1u0sy_           1 GKRVLIV----DDAAFMRMMLKDIITKAGYEVAGEA   32 (118)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEE----eCCHHHHHHHHHHHHHcCCceEEEE
Confidence            4789999    8888899999999988899986543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=82.08  E-value=0.36  Score=38.42  Aligned_cols=78  Identities=24%  Similarity=0.325  Sum_probs=44.4

Q ss_pred             cCeEEEEecCCCccccchHH--HHHHHHhC----CCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHh
Q 015746           74 KKKVLIVNTNSGGHAVIGFY--LAKELLGS----GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~--l~~~Ll~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~  147 (401)
                      .|||-|.    || |.+|..  ++..|+..    +.+++.++.++++.+...... .+.........++..  ..+..++
T Consensus         2 ~mKI~iI----Ga-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~-~~~~~~~~~~~~i~~--~td~~ea   73 (171)
T d1obba1           2 SVKIGII----GA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIA-KKYVEEVGADLKFEK--TMNLDDV   73 (171)
T ss_dssp             CCEEEEE----TT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHH-HHHHHHTTCCCEEEE--ESCHHHH
T ss_pred             CcEEEEE----CC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHH-HHHHHhcCCCeEEEE--eCChhhc
Confidence            5899999    75 888864  34445543    459999999876543211000 000011112233332  3456778


Q ss_pred             hcCCcccEEEeCCC
Q 015746          148 VGGVTFDVVLDNNG  161 (401)
Q Consensus       148 ~~~~~~d~Vv~~a~  161 (401)
                      +.++  |+|+..++
T Consensus        74 L~da--d~Vv~~~~   85 (171)
T d1obba1          74 IIDA--DFVINTAM   85 (171)
T ss_dssp             HTTC--SEEEECCC
T ss_pred             ccCC--CeEeeecc
Confidence            8887  99998766

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=81.98  E-value=0.47  Score=39.31  Aligned_cols=93  Identities=15%  Similarity=0.132  Sum_probs=51.4

Q ss_pred             cCeEEEEecCCCccccchH-HHHHHHHhC-CCeEEEE-ecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGF-YLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~-~l~~~Ll~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      .-+|-|+    | .|.+|+ +++..+... +.+|+++ +|++++.....+       ...-+...+.  ...++++++++
T Consensus        33 ~iriaiI----G-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~-------~~~i~~~~~~--~~~d~~ell~~   98 (221)
T d1h6da1          33 RFGYAIV----G-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAA-------EYGVDPRKIY--DYSNFDKIAKD   98 (221)
T ss_dssp             CEEEEEE----C-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHH-------HTTCCGGGEE--CSSSGGGGGGC
T ss_pred             CEEEEEE----c-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHH-------hhcccccccc--ccCchhhhccc
Confidence            4589999    5 689996 566666554 5677755 555544332110       0000000010  12334455555


Q ss_pred             CcccEEEeCCC-------------------------CChhhHHHHHHHHHhCCCC
Q 015746          151 VTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       151 ~~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv~  180 (401)
                      .++|+|+-+..                         .++.....|++++++.++.
T Consensus        99 ~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~  153 (221)
T d1h6da1          99 PKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK  153 (221)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred             ccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCc
Confidence            45666664333                         3678888888888888763

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.75  E-value=0.93  Score=32.61  Aligned_cols=37  Identities=19%  Similarity=0.108  Sum_probs=30.4

Q ss_pred             ccccCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCC
Q 015746           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (401)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~  112 (401)
                      ...+|+|+|+     |+|.-|.-++..|.+.+-+|+.+.|..
T Consensus        29 ~f~gK~VlVV-----G~g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVV-----GGASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEE-----CSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hcCCCeEEEE-----CCCCCHHHHHHHHHHhcCEEEEEEecC
Confidence            4568999999     688999999999998877776666655

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.29  E-value=0.095  Score=43.71  Aligned_cols=26  Identities=31%  Similarity=0.445  Sum_probs=23.8

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeE
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV  105 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V  105 (401)
                      |||+|+     |.|.+|..++.+|+++|++|
T Consensus         1 mkV~VI-----GaGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVI-----GAGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEE-----CchHHHHHHHHHHHHCCCCc
Confidence            789999     78999999999999999864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.28  E-value=0.57  Score=38.25  Aligned_cols=33  Identities=21%  Similarity=0.326  Sum_probs=30.0

Q ss_pred             eEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      -|+|+     |+|.-|...|..|.++|++|.++-+...
T Consensus         7 DviVi-----GaG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           7 DVIVL-----GTGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             SEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEE-----CcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            38999     7999999999999999999999998763

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.21  E-value=3.8  Score=31.89  Aligned_cols=104  Identities=11%  Similarity=0.075  Sum_probs=53.6

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCCC----eEEEEecCCCCc---ccCCCCCCCcccchhcCCCeEEEcCHhhHH
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH----EVTIMTVGDENS---DKMKKPPFNRFNEIVSAGGKTVWGDPAEVG  145 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~----~V~~~~r~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~  145 (401)
                      ++.+|.|.     |.|.||+.+++.|.++..    +|.++..+....   +.+.......+..... .......+.+.+.
T Consensus         3 k~i~I~l~-----G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~   76 (168)
T d1ebfa1           3 KVVNVAVI-----GAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALA-ASTTKTLPLDDLI   76 (168)
T ss_dssp             SEEEEEEE-----CCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHH-TCCCBCCCHHHHH
T ss_pred             CEEEEEEE-----eCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhh-hcccccccHHHHH
Confidence            45689999     899999999999998742    455554432111   0000000001111110 1111111345555


Q ss_pred             HhhcC-CcccEEEeCCCCChhhHHHHHHHHHhCCCCEEEEe
Q 015746          146 NVVGG-VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (401)
Q Consensus       146 ~~~~~-~~~d~Vv~~a~~~~~~~~~ll~aa~~~gv~~~v~~  185 (401)
                      ..+.. ...++++.+.+.. ... .....+.+.|. ++|..
T Consensus        77 ~~~~~~~~~~vivd~t~~~-~~~-~~~~~aL~~G~-hVVTA  114 (168)
T d1ebfa1          77 AHLKTSPKPVILVDNTSSA-YIA-GFYTKFVENGI-SIATP  114 (168)
T ss_dssp             HHHTTCSSCEEEEECSCCH-HHH-TTHHHHHHTTC-EEECC
T ss_pred             HHhccCCCceEEEEecCCh-HHH-HHHHHHHHcCC-eEEec
Confidence            55443 3467888887642 222 34445667775 78743

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.15  E-value=0.47  Score=41.94  Aligned_cols=36  Identities=25%  Similarity=0.215  Sum_probs=25.9

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEec
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r  110 (401)
                      ||||++..||||.=+=--.|+++|.++||+|+.++.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            688886443333333356799999999999999874

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.62  E-value=0.53  Score=40.85  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      |..|+|+     |+|.-|..+|++|.++|++|.++-++..
T Consensus         1 M~dv~II-----GaG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIV-----GSGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEE-----CCcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            4679999     7899999999999999999999987663

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=80.39  E-value=3.5  Score=29.91  Aligned_cols=32  Identities=31%  Similarity=0.356  Sum_probs=27.2

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEe
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~  109 (401)
                      ++||||+    =-.-.+-..+.+.|.+.||+|....
T Consensus         2 ~krILiV----DDd~~~~~~l~~~L~~~g~~v~~a~   33 (121)
T d1mvoa_           2 NKKILVV----DDEESIVTLLQYNLERSGYDVITAS   33 (121)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred             CCCEEEE----ECCHHHHHHHHHHHHHCCCEEEEEC
Confidence            4789999    8888899999999999999987543

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=80.38  E-value=3.2  Score=30.01  Aligned_cols=78  Identities=22%  Similarity=0.239  Sum_probs=48.6

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcCCccc
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~d  154 (401)
                      |||||+    =-.-.+...+...|.+.||+|.......                              +.-+.+...+||
T Consensus         1 KrILiV----dDd~~~~~~l~~~L~~~g~~v~~a~~~~------------------------------eal~~~~~~~~d   46 (117)
T d2a9pa1           1 KKILIV----DDEKPISDIIKFNMTKEGYEVVTAFNGR------------------------------EALEQFEAEQPD   46 (117)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESSHH------------------------------HHHHHHHHHCCS
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEECCHH------------------------------HHHHHHHhcCCC
Confidence            689999    8888889999999999999987543222                              222233334589


Q ss_pred             EEEeCCC-CChhhHHHHHHHHHhCCCCEEEEecc
Q 015746          155 VVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISS  187 (401)
Q Consensus       155 ~Vv~~a~-~~~~~~~~ll~aa~~~gv~~~v~~SS  187 (401)
                      .|+--.. .+..|. .+++..++..--.+|.+|+
T Consensus        47 lillD~~mp~~~G~-~~~~~i~~~~~~pvI~lt~   79 (117)
T d2a9pa1          47 IIILDLMLPEIDGL-EVAKTIRKTSSVPILMLSA   79 (117)
T ss_dssp             EEEECSSCSSSCHH-HHHHHHHTTCCCCEEEEES
T ss_pred             EEEeccccCCCCcc-HHHHHHHhCCCCCEEEEec
Confidence            8884332 234444 3444445543224777775

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.27  E-value=0.8  Score=40.17  Aligned_cols=36  Identities=28%  Similarity=0.412  Sum_probs=31.4

Q ss_pred             ccCeEEEEecCCCccccchHHHHHHHHhCC--CeEEEEecCCC
Q 015746           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDE  113 (401)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~~~r~~~  113 (401)
                      .+|+|+|+     |.|.-|-..+..|+++|  ++|+++-|...
T Consensus         3 ~~KrVaII-----GaG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAII-----GAGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEE-----CCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEE-----CcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            47899999     78999999999999886  69999998764

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.27  E-value=0.68  Score=37.18  Aligned_cols=33  Identities=30%  Similarity=0.470  Sum_probs=28.1

Q ss_pred             CeEEEEecCCCccccchHHHHHHHHhC--CCeEEEEecCC
Q 015746           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (401)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~~~r~~  112 (401)
                      |||+|+     |.|++|-.++..|.+.  +.+|+++.|+.
T Consensus         1 ~KVvII-----GgG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVL-----GSSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEE-----CSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEE-----CCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            789999     6789999999999876  45788888765

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.21  E-value=0.7  Score=36.32  Aligned_cols=35  Identities=40%  Similarity=0.509  Sum_probs=30.3

Q ss_pred             cCeEEEEecCCCccccchHHHHHHHHhCCCeEEEEecCCC
Q 015746           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~~~r~~~  113 (401)
                      .++|+|+     |.|++|-.++..|.+.|++|.++.+.+.
T Consensus         3 ~~~VvII-----GgG~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIV-----GTGLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEE-----CCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEE-----CCcHHHHHHHHHHHHcCCceEEEEecCc
Confidence            5789999     7899999999999999999887766554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=80.15  E-value=3  Score=32.09  Aligned_cols=86  Identities=15%  Similarity=0.101  Sum_probs=49.4

Q ss_pred             cCeEEEEecCCCccccchHH-HHHHHHhC-CCeEEEEe-cCCCCcccCCCCCCCcccchhcCCCeEEEcCHhhHHHhhcC
Q 015746           74 KKKVLIVNTNSGGHAVIGFY-LAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (401)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~-l~~~Ll~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~~  150 (401)
                      ++||.|+    | +|.+|+. ....|... +.+++++. ++.++.....        .  ..++.+.  |  +++.++.+
T Consensus         1 Kiri~iI----G-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~--------~--~~~~~~~--~--~~~~l~~~   61 (164)
T d1tlta1           1 KLRIGVV----G-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPIC--------E--SWRIPYA--D--SLSSLAAS   61 (164)
T ss_dssp             CEEEEEE----C-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHH--------H--HHTCCBC--S--SHHHHHTT
T ss_pred             CCEEEEE----c-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhh--------h--ccccccc--c--cchhhhhh
Confidence            3689999    5 7999975 45666554 66777654 5554433211        1  1122211  1  22333333


Q ss_pred             CcccEEEeCCC-------------------------CChhhHHHHHHHHHhCCCC
Q 015746          151 VTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (401)
Q Consensus       151 ~~~d~Vv~~a~-------------------------~~~~~~~~ll~aa~~~gv~  180 (401)
                        +|+|+-+..                         .+......+++++++.|+.
T Consensus        62 --~D~V~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~~  114 (164)
T d1tlta1          62 --CDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT  114 (164)
T ss_dssp             --CSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred             --cccccccccchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCCc
Confidence              577765433                         3577788888888888763