Citrus Sinensis ID: 015768

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Protein Sequence
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Secondary Structure (PSIPRED)
cccHHHHHHHHccccHHHHHHHHHHHHcccccEEccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHcccEEEEEcccccccccccHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccEEEEcccccccccccHHHHHccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccHHHHHHHHHHHccEEEEccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccEEEccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcccccHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccHHHEEEEccHHHHHHHHHHHHHccccEEEEccccEEccHHHHHHccccEEEEEccccccccccHHHHHHHHHcccccEEEEEEccccccccEccHHHHHHHHHHHHHccEEEEEcHHHHHHEEccccEEccccccEEEEEcHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccHHHHHHHHHHHccEEEEEcccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEc
Coil and Loop (DISEMBL)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQgvvywqppkmAMEKVKELvwdpsiskygadeglPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCdagdsvvmfAPYYFNSYMSFQMTGVTHilvgpcssktlhpdadwlektletkptpklvsvvnpgnpsgtyipERLLKRISDLCKAAGSWLVVDNTYEYfmydgrkhccvegdhVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSlqtgpewvTERVKDLVRNREIIREAlsplgegavkggEGAIYLWARlpekhlddfEVVRWLAHRHgvvvipggacgcrghlrisfgglvedDCKAAADRLRRGLEELVKDGMVQEHVLLID
Flexible Loop (DISEMBL)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKtletkptpklvsvvnpgnpsgtYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRealsplgegavkGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEelvkdgmvqehvllid
Low Complexity Region (SEG)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Disordered region (IsUnstruct)
*************TEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE*****KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLL**
Disordered Region (DISOPRED)
******************MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Disordered Region (DISEMBL)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Disordered Region (DISPRO)
*G**AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	400	2.2.26 [Sep-21-2011]
Q9V0L2	389	Aspartate aminotransferas	yes	no	0.892	0.917	0.278	7e-34
O67781	394	Aspartate aminotransferas	yes	no	0.795	0.807	0.309	8e-34
Q9SIE1	475	Bifunctional aspartate am	no	no	0.887	0.747	0.266	8e-31
E9L7A5	479	Bifunctional aspartate am	N/A	no	0.897	0.749	0.276	9e-31
Q56232	385	Aspartate aminotransferas	yes	no	0.877	0.911	0.275	2e-30
Q9X0Y2	377	Aspartate aminotransferas	yes	no	0.9	0.954	0.260	8e-30
Q55128	389	Aspartate aminotransferas	N/A	no	0.81	0.832	0.259	2e-29
O33822	383	Aspartate aminotransferas	N/A	no	0.877	0.916	0.262	3e-29
Q60317	375	Probable aspartate aminot	yes	no	0.852	0.909	0.282	1e-27
P16524	393	Putative N-acetyl-LL-diam	yes	no	0.907	0.923	0.268	7e-27

>sp|Q9V0L2|AAT_PYRAB Aspartate aminotransferase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aspC PE=3 SV=1

 Score =  145 bits (365), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 187/377 (49%), Gaps = 20/377 (5%)

Query: 21  QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG + GLPELR+A+ +K
Sbjct: 17  KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DMGLTHYGPNIGLPELREAIAEK 75

Query: 81  LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           L ++N +       +MV  GANQAF+  +      G+ V++  P + +   +  + G   
Sbjct: 76  LKKQNNIEADPNKEIMVLVGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 135

Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
           + V          + D L+K + T+ T  L+ + +P NP+G+ + ++ L+ I+D      
Sbjct: 136 VEVPTYEENEFRLNVDELKKYV-TEKTKALI-INSPCNPTGSVLKKKDLEEIADFAVEHD 193

Query: 198 SWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252
             ++ D  YE+F+YD  KH  +       +  + +  FSK + M GWR+G++A PS +  
Sbjct: 194 LIVISDEVYEHFIYDDVKHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 251

Query: 253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 310
              +++K Q     C     Q+ A  +L+    W  V E  K+  R R+++ + L+ +G 
Sbjct: 252 -IEKMVKFQMYNATCPVTFIQYAAAKALRDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 310

Query: 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 368
             VK  +GA Y++ R+ +  L   E    +     V V+PG A G    G++RIS+    
Sbjct: 311 PTVK-PKGAFYIFPRIKDTGLTSKEFSELMLMEAKVAVVPGSAFGKAGEGYVRISYATAY 369

Query: 369 EDDCKAAADRLRRGLEE 385
           E   + A DR+ + L E
Sbjct: 370 E-KLEEAMDRMEKVLRE 385

Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp|O67781|AAT_AQUAE Aspartate aminotransferase OS=Aquifex aeolicus (strain VF5) GN=aspC PE=3 SV=1

 Score =  144 bits (364), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 165/339 (48%), Gaps = 21/339 (6%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G+PELR+A+ +KL +ENK+ YK S ++V+AGA      I + + D GD V++ 
Sbjct: 63  TKYAPSAGIPELREAIAEKLLKENKVEYKPSEIVVSAGAKMVLFLIFMAILDEGDEVLLP 122

Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSG 178
           +PY+       +  G   + V     K       D  EK  E     K + + +P NP+G
Sbjct: 123 SPYWVTYPEQIRFFGGVPVEVPLKKEKGFQLSLEDVKEKVTERT---KAIVINSPNNPTG 179

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNLF----SFSK 232
               E  LK+I++ C   G +++ D  YEYF+Y   K        D V N+     +FSK
Sbjct: 180 AVYEEEELKKIAEFCVERGIFIISDECYEYFVYGDAKFVSPASFSDEVKNITFTVNAFSK 239

Query: 233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--GPEWVTER 290
           +Y M GWR+GY+A P E   +A  +  +        +  +Q+ AL +L+     ++V E 
Sbjct: 240 SYSMTGWRIGYVACPEE---YAKVIASLNSQSVSNVTTFAQYGALEALKNPKSKDFVNEM 296

Query: 291 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVV 347
                R R+   E LS +    V   EGA Y++       EK   D ++  +L  +  V 
Sbjct: 297 RNAFERRRDTAVEELSKIPGMDVVKPEGAFYIFPDFSAYAEKLGGDVKLSEFLLEKAKVA 356

Query: 348 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           V+PG A G  G LR+S+  L E+       R+++ LEE+
Sbjct: 357 VVPGSAFGAPGFLRLSY-ALSEERLVEGIRRIKKALEEI 394

Aquifex aeolicus (strain VF5) (taxid: 224324)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9SIE1|PAT_ARATH Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Arabidopsis thaliana GN=PAT PE=1 SV=2

 Score =  135 bits (339), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 181/383 (47%), Gaps = 28/383 (7%)

Query: 25  LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84
           LV+     + LA G   +  PK+  E     + +   ++Y  + G+ ELR+A+ +KL +E
Sbjct: 94  LVQSGVPVIRLAAGEPDFDTPKVVAEAGINAIRE-GFTRYTLNAGITELREAICRKLKEE 152

Query: 85  NKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
           N L  +   ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   T +++  
Sbjct: 153 NGLSYAPDQILVSNGAKQSLLQAVLAVCSPGDEVIIPAPYWVSYTEQARLADATPVVIPT 212

Query: 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
             S     D   LE  L  K   +L+ + +P NP+G+  P+ LL+ I+ +       LV+
Sbjct: 213 KISNNFLLDPKDLESKLTEK--SRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVL 270

Query: 203 -DNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256
            D  YE+ +Y    H          +  + +  FSKA+ M GWR+GY+A P  +    + 
Sbjct: 271 SDEIYEHIIYAPATHTSFASLPDMYERTLTVNGFSKAFAMTGWRLGYLAGPKHIVAACS- 329

Query: 257 LLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALSPLGEGAV 313
             K+Q  +   AS I+Q   + +L   + G E V E VK     R+ + ++L  +    +
Sbjct: 330 --KLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKI 387

Query: 314 KGGEGAIYLWARLPEKH----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 363
              +GA YL+      +           D   +  +   +  V ++PG A G    +RIS
Sbjct: 388 SEPQGAFYLFIDFSAYYGSEAEGFGLINDSSSLALYFLDKFQVAMVPGDAFGDDSCIRIS 447

Query: 364 FGGLVEDDCKAAADRLRRGLEEL 386
           +   + D  +AA +++R+ LE L
Sbjct: 448 YATSL-DVLQAAVEKIRKALEPL 469

Prokaryotic-type aspartate aminotransferase. Has also a prenate transaminase activity. Involved in the aromatic amino acids biosynthesis pathway via the arogenate route. Required for the transamination of prephenate into arogenate. Required for early development of the embryo.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 7

EC: 9

>sp|E9L7A5|PAT_PETHY Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Petunia hybrida PE=1 SV=1

 Score =  134 bits (338), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 28/387 (7%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  Q   LV+     + LA G   +  P   +E     + +   ++Y  + G  ELR A+
Sbjct: 91  ITDQATALVQAGVPVIRLAAGEPDFDTPAPIVEAGINAIRE-GHTRYTPNAGTMELRSAI 149

Query: 78  VKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV 135
             KL +EN L  +   ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   
Sbjct: 150 SHKLKEENGLSYTPDQILVSNGAKQSIIQAVLAVCSPGDEVLIPAPYWVSYPEMARLADA 209

Query: 136 THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           T +++    S+    D   LE  L  K   +L+ + +P NP+G+  P +LL++I+++   
Sbjct: 210 TPVILPTSISEDFLLDPKLLESKLTEK--SRLLILCSPSNPTGSVYPRKLLEQIAEIVAR 267

Query: 196 AGSWLVV-DNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
               LV+ D  YE+ +Y    H          D  + +  FSKA+ M GWR+GYIA P  
Sbjct: 268 HPRLLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKH 327

Query: 250 VEGFATQLLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALS 306
              F     K+Q      AS ISQ  A+ +L     G E V   VK     R+ + ++  
Sbjct: 328 ---FIAACNKIQSQFTSGASSISQKAAVAALGLGYAGGELVATMVKSFRERRDYLVKSFG 384

Query: 307 PLGEGAVKGGEGAIYLWARLPEKH---LDDF-------EVVRWLAHRHGVVVIPGGACGC 356
            +    +    GA YL+  L   +   +D F        + R+L  +  V ++PG A G 
Sbjct: 385 EIEGVKISEPRGAFYLFIDLSSYYGVEVDGFGSINNSESLCRYLLDKAQVALVPGDAFGD 444

Query: 357 RGHLRISFGGLVEDDCKAAADRLRRGL 383
              +RIS+   +    +AA +R+++ L
Sbjct: 445 DTCIRISYAASL-STLQAAVERIKKAL 470

Prokaryotic-type aspartate aminotransferase. Has also a prenate transaminase activity. Involved in the aromatic amino acids biosynthesis pathway via the arogenate route. Required for the transamination of prephenate into arogenate. Can use 2-oxoglutarate, oxaloacetate and prephenate as substrates, but not phenylpyruvate or 4-hydroxyphenylpyruvate.

Petunia hybrida (taxid: 4102)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 7

EC: 9

>sp|Q56232|AAT_THET8 Aspartate aminotransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=aspC PE=1 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 165/367 (44%), Gaps = 16/367 (4%)

Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83

Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201

Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
            D  YE+ +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258

Query: 260 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 316
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318

Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375

Query: 377 DRLRRGL 383
           +R  R L
Sbjct: 376 ERFARVL 382

Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (taxid: 300852)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9X0Y2|AAT_THEMA Aspartate aminotransferase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=aspC PE=1 SV=1

 Score =  131 bits (330), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 181/380 (47%), Gaps = 20/380 (5%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           ++++  +   M +  + + L++  ++ ++L  G   +  P+  +E+    +    + KY 
Sbjct: 5   RISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV-KYT 63

Query: 66  ADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
              G+ ELR+ + K++ +  K  +    V+VT GA QA  N  + L D GD V++F+P +
Sbjct: 64  DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVW 123

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            +      + G T  +V    SK   P  + +E  L  K   K V + +P NP+G     
Sbjct: 124 VSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK--TKAVLINSPNNPTGVVYRR 181

Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---EG-DHVVNLFSFSKAYGMMGW 239
             L+ +  L K    +++ D  Y+  +Y       +   EG D +V +  FSK++ M GW
Sbjct: 182 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 241

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGY+    +V   AT + K+Q +   C + ++Q+ AL +L+    ++ +  K+    + 
Sbjct: 242 RVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE---RKN 295

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
            + E L  +G   V+  EGA YL+ ++     DD +    L     V ++PG A    G 
Sbjct: 296 FVVERLKKMGVKFVE-PEGAFYLFFKV---RGDDVKFCERLLEEKKVALVPGSAFLKPGF 351

Query: 360 LRISFGGLVEDDCKAAADRL 379
           +R+SF   +E     A DR+
Sbjct: 352 VRLSFATSIE-RLTEALDRI 370

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q55128|AAT_SYNY3 Aspartate aminotransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=aspC PE=3 SV=1

 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 169/362 (46%), Gaps = 38/362 (10%)

Query: 41  YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGA 98
           +  PP +   +  +L  D   ++YG   G P LR A+ KKL ++N L Y+++ ++VT G 
Sbjct: 42  FTTPPHIV--EAAKLALDEGKTRYGPAAGEPALRQAIAKKLREKNNLPYEAANILVTNGG 99

Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158
             +  N++L + + GD V++ APY+ +     ++   T ++V   ++       + L + 
Sbjct: 100 KHSLFNLMLAMIEQGDEVIIPAPYWLSYPEMVRLAEGTPVIVNTTAATDYKITPEQLRQA 159

Query: 159 LETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC 217
           + +K   KL  + +P NP+G  Y P  +    + + +    ++V D  YE  +YDG +H 
Sbjct: 160 ITSKS--KLFVLNSPSNPTGAVYTPAEIRALAAVILEYEDLYVVSDEIYERILYDGTEHL 217

Query: 218 CVEG------DHVVNLFSFSKAYGMMGWRVGYIA--YP-----SEVEGFATQLLKVQDNI 264
            +           +    F+K+Y M GWRVGY+A   P     S ++G +T         
Sbjct: 218 SIGAVNDEIFQRTIISNGFAKSYSMTGWRVGYLAGELPLIQACSTIQGHSTS-------- 269

Query: 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 324
            +C    +Q+ A+ +L+     V   VK     R++I E ++ +   +    +GA Y++ 
Sbjct: 270 NVCT--FAQYGAIAALENPQTCVETMVKAFTERRQVIVEGINQIAGLSCPNPKGAFYVFV 327

Query: 325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384
            + +  L+  E    L   H V VIPG A G    +R S+            D +++GL 
Sbjct: 328 DIAKTGLNSLEFSARLLESHQVAVIPGAAFGADDCVRFSYA--------TDMDTIKQGLA 379

Query: 385 EL 386
           EL
Sbjct: 380 EL 381

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|O33822|AAT_THEAQ Aspartate aminotransferase OS=Thermus aquaticus GN=aspC PE=3 SV=1

 Score =  129 bits (325), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 18/369 (4%)

Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+A+ +K  +
Sbjct: 25  ELRRKGVDLVALTAGEPDFDTPEHVKEAGRRALAQ-GKTKYAPPAGIPELREAVAEKFRR 83

Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ APY+ +     +  G   + V 
Sbjct: 84  ENGLEVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLAPYWVSYPEMVRFAGGVPVEVP 143

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   PE +L+ ++++      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGVVYPEEVLRALAEMALQHDFYLV 201

Query: 202 VDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV----EGFAT 255
            D  YE+ +Y+G       +  +H + +   +KA+ M GWR+GY   P  V       ++
Sbjct: 202 SDEIYEHLIYEGAHFSPGTLAPEHTITVNGAAKAFAMTGWRIGYACGPKAVIKAMADVSS 261

Query: 256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315
           Q     D I   A++     AL + +    ++    +   + R+++ E LS +G  AV+ 
Sbjct: 262 QSTTSPDTIAQWATL----EALTNREASMAFIAMAREAYRKRRDLLLEGLSRIGLEAVRP 317

Query: 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAA 375
             GA Y+         ++ E    L    GV V+PG      GH+R+S+    E++ K A
Sbjct: 318 S-GAFYVLMDTSPFAPNEVEAAERLLM-AGVAVVPGTEFAAFGHVRLSY-ATGEENLKKA 374

Query: 376 ADRLRRGLE 384
            +R  + L+
Sbjct: 375 LERFAQALQ 383

Thermus aquaticus (taxid: 271)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q60317|AAT1_METJA Probable aspartate aminotransferase 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0001 PE=3 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 180/365 (49%), Gaps = 24/365 (6%)

Query: 22  IQELVR-GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           I+E+      + ++L  G   +  PK  +E  K    D   + Y  + G+PELR+ +  K
Sbjct: 14  IREIFNLATSDCINLGIGEPDFDTPKHIIEAAKR-ALDEGKTHYSPNNGIPELREEISNK 72

Query: 81  LNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
           L  +  L   K +++VT GA++A +  ++TL D GD V++  P  F SY S     +T  
Sbjct: 73  LKDDYNLDVDKDNIIVTCGASEALMLSIMTLIDRGDEVLIPNPS-FVSYFS-----LTEF 126

Query: 139 LVGPCSSKTLHPDADW-LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
             G   +  L  + +  LEK  E  TK T KL+   +P NP+G    +  +K ++++ + 
Sbjct: 127 AEGKIKNIDLDENFNIDLEKVKESITKKT-KLIIFNSPSNPTGKVYDKETIKGLAEIAED 185

Query: 196 AGSWLVVDNTYEYFMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE--- 251
               +V D  Y+  +YD + +  ++  D  + +  FSK Y M GWR+GY+A   E+    
Sbjct: 186 YNLIIVSDEVYDKIIYDKKHYSPMQFTDRCILINGFSKTYAMTGWRIGYLAVSDELNKEL 245

Query: 252 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311
                ++K+      CA+  +Q+ AL +L+   + V + V++    R++I   L  + + 
Sbjct: 246 DLINNMIKIHQYSFACATTFAQYGALAALRGSQKCVEDMVREFKMRRDLIYNGLKDIFK- 304

Query: 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVE 369
            V   +GA Y++  + E + D  EV + L   + V+ +PG A G  G  ++R S+    E
Sbjct: 305 -VNKPDGAFYIFPDVSE-YGDGVEVAKKLIE-NKVLCVPGVAFGENGANYIRFSYATKYE 361

Query: 370 DDCKA 374
           D  KA
Sbjct: 362 DIEKA 366

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P16524|PATA_BACSU Putative N-acetyl-LL-diaminopimelate aminotransferase OS=Bacillus subtilis (strain 168) GN=patA PE=1 SV=3

 Score =  121 bits (304), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 172/388 (44%), Gaps = 25/388 (6%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA 66
           L  +A E E+  + +   LV   ++ +SL  G   +  P       K+ + D +++ Y  
Sbjct: 5   LNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAAKKAI-DENVTSYTP 63

Query: 67  DEGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           + G  ELR A+   +KK    N   +S +++T GA+QA      T+   GD V+M  P Y
Sbjct: 64  NAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIY 123

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
                   + G   ++V   +S      A  +E  L   P  K V +  P NP+G  + E
Sbjct: 124 PGYEPIINLCGAKPVIVD-TTSHGFKLTARLIEDAL--TPNTKCVVLPYPSNPTGVTLSE 180

Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLFSFSKAYGMMGWR 240
             LK I+ L K    +++ D  Y    YD R H  +     D  + +   SK++ M GWR
Sbjct: 181 EELKSIAALLKGRNVFVLSDEIYSELTYD-RPHYSIATYLRDQTIVINGLSKSHSMTGWR 239

Query: 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300
           +G++  P ++   A  +LKV      CAS ISQ  AL ++  G +      +   +  + 
Sbjct: 240 IGFLFAPKDI---AKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDY 296

Query: 301 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RG 358
           + + L  +G   VK   GA Y++  +    +  F+    L    GV ++PG +      G
Sbjct: 297 VYDRLVSMGLDVVKPS-GAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFSTYGEG 355

Query: 359 HLRISFGGLVEDDCKAAADRLRRGLEEL 386
           ++R+SF          + D LR GL+ L
Sbjct: 356 YVRLSFA--------CSMDTLREGLDRL 375

May catalyze the conversion of L-2-acetamido-6-oxopimelate to N-acetyl-LL-2,6-diaminopimelate.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
452090862	394	aspartate aminotransferase [Prunus persi	0.982	0.997	0.837	0.0
255552987	394	aspartate aminotransferase, putative [Ri	0.982	0.997	0.814	0.0
224058737	394	predicted protein [Populus trichocarpa]	0.982	0.997	0.840	0.0
449436086	398	PREDICTED: bifunctional aspartate aminot	0.982	0.987	0.789	0.0
388514633	399	unknown [Lotus japonicus]	0.99	0.992	0.785	0.0
356550576	395	PREDICTED: bifunctional aspartate aminot	0.977	0.989	0.801	0.0
225442741	394	PREDICTED: aspartate aminotransferase [V	0.982	0.997	0.784	0.0
363806962	395	uncharacterized protein LOC100803887 [Gl	0.977	0.989	0.791	0.0
355755203	393	PLP-dependent aminotransferase [Papaver	0.982	1.0	0.768	1e-180
115434860	394	Os01g0178000 [Oryza sativa Japonica Grou	0.982	0.997	0.733	1e-177

>gi|452090862|gb|AGF95102.1| aspartate aminotransferase [Prunus persica]

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/394 (83%), Positives = 371/394 (94%), Gaps = 1/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY KLAKRA+ETEMPIMVQIQ+LVRGAKNAVSLAQGVV+WQPPK A++KVKELVW+PS
Sbjct: 1   MGSYGKLAKRAVETEMPIMVQIQQLVRGAKNAVSLAQGVVHWQPPKQALDKVKELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+ ELR+ALVKKL+ ENKLYKSSVMVT+GANQAFVN+VLTLCD+GDSVVMFA
Sbjct: 61  ISRYGADEGILELREALVKKLHNENKLYKSSVMVTSGANQAFVNLVLTLCDSGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP   +TL+PDADWLEKTL ETKPTPKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGHPETLYPDADWLEKTLSETKPTPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIP+ LLKRISD+C+ AGSWLVVDNTYEYFMYD  KH CVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPDPLLKRISDICRDAGSWLVVDNTYEYFMYDDLKHTCVEGNHIVNIFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQ+LAL+SL+ GPEWVTERVK LV+N+E
Sbjct: 241 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQYLALHSLEMGPEWVTERVKGLVKNKE 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
           I+ EALSPLG+ AVKGGEGAIYLWA+LP+K+ DD + V WLAHRHGVVVIPG ACGC G+
Sbjct: 301 IVLEALSPLGKDAVKGGEGAIYLWAKLPDKYADDDKFVHWLAHRHGVVVIPGSACGCPGN 360

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
           +RISFGGL+EDDCKAAA+RLRRGLEEL++DGMVQ
Sbjct: 361 VRISFGGLLEDDCKAAAERLRRGLEELIRDGMVQ 394

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552987|ref|XP_002517536.1| aspartate aminotransferase, putative [Ricinus communis] gi|223543168|gb|EEF44700.1| aspartate aminotransferase, putative [Ricinus communis]

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/394 (81%), Positives = 365/394 (92%), Gaps = 1/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY  LAKRALETEMP+MVQIQEL+RGAKNA+SLAQGVV+W PPK A+EKVKELVW+P 
Sbjct: 1   MGSYGMLAKRALETEMPVMVQIQELIRGAKNAISLAQGVVHWLPPKKALEKVKELVWEPR 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+PELR+AL+ KL +ENKL  SSVMVTAGANQAFVNIVL LCD GDSVVMFA
Sbjct: 61  ISRYGADEGIPELREALMLKLRKENKLVNSSVMVTAGANQAFVNIVLALCDPGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTG+T+ILVGP + KTLHPDADWLE+TL ET+P PK+V+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGITNILVGPGNPKTLHPDADWLERTLSETRPIPKVVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIPE LLKRISDLC+ AGSWL+VDNTYEYFMYDG KH C+EGDH+VN+FSFSKAYGMMGW
Sbjct: 181 YIPEPLLKRISDLCRKAGSWLIVDNTYEYFMYDGLKHSCIEGDHIVNIFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIAYPS VEGFATQLLK+QDNIPICASI+SQHLALYSL+ GPEWVT RVKDLV+NRE
Sbjct: 241 RVGYIAYPSGVEGFATQLLKIQDNIPICASILSQHLALYSLEVGPEWVTARVKDLVKNRE 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
           I+ EALSPLGE AV+GGEGAIYLWA+LP+K++DDF+VVRWLA RHGVVVIPGGA GC GH
Sbjct: 301 ILLEALSPLGEDAVRGGEGAIYLWAKLPDKYVDDFKVVRWLATRHGVVVIPGGASGCPGH 360

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
           +RISFGGL+E DC++AA+RL++GLEELV +GMV+
Sbjct: 361 VRISFGGLIEPDCRSAAERLKKGLEELVSNGMVE 394

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058737|ref|XP_002299622.1| predicted protein [Populus trichocarpa] gi|118486870|gb|ABK95269.1| unknown [Populus trichocarpa] gi|222846880|gb|EEE84427.1| predicted protein [Populus trichocarpa]

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/394 (84%), Positives = 369/394 (93%), Gaps = 1/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY KLAKRA+ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPK A+ KVKELVW+PS
Sbjct: 1   MGSYVKLAKRAVETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKQALNKVKELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+PELR+AL +KL +ENKL KSSVMVTAGANQAFVN+VL LCDAGDSVVMFA
Sbjct: 61  ISRYGADEGIPELREALTQKLQKENKLVKSSVMVTAGANQAFVNLVLALCDAGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP + +TLHPDADWLE+TL E KP PK+V+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGNPETLHPDADWLERTLSEAKPVPKVVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIP+ LLKRISDLC+ AGSWL+VDNTYEYFMYDG KH C+EGDHVVN+FSFSKAYGMMGW
Sbjct: 181 YIPDPLLKRISDLCREAGSWLIVDNTYEYFMYDGLKHSCIEGDHVVNIFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIAYPS VEGF TQLLK+QDNIPICASI+SQHLALYSL+ GPEWVTE+VKDLV+NR+
Sbjct: 241 RVGYIAYPSGVEGFQTQLLKIQDNIPICASILSQHLALYSLEMGPEWVTEQVKDLVKNRD 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
           II EALSPLGEGAVKGGEGAIYLWA+LPE+++DD +VVRWLA RHGV+VIPGGACGC GH
Sbjct: 301 IILEALSPLGEGAVKGGEGAIYLWAKLPEQYVDDDKVVRWLATRHGVIVIPGGACGCPGH 360

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
           LRISFGGL E+DCKAAA+RLRRGLE+LV +G+VQ
Sbjct: 361 LRISFGGLTENDCKAAAERLRRGLEDLVSNGIVQ 394

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436086|ref|XP_004135825.1| PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Cucumis sativus] gi|449520563|ref|XP_004167303.1| PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Cucumis sativus]

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/394 (78%), Positives = 360/394 (91%), Gaps = 1/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY +LA+RALETEMPIMV+IQE+VRG+KN +SLAQGVVYWQPP+ A++K  ELVW+PS
Sbjct: 1   MGSYGRLARRALETEMPIMVKIQEIVRGSKNVLSLAQGVVYWQPPQQALKKAAELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+PELR+AL +KLN+ENKLYKSSVMVTAGANQAFVN+VLTLCDAGDSVVMFA
Sbjct: 61  ISRYGADEGIPELREALTRKLNEENKLYKSSVMVTAGANQAFVNLVLTLCDAGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP   KTLHPD DWLEKTL E KPTPKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGDPKTLHPDPDWLEKTLSEVKPTPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIP+ LLKR++++C+ AGSWLVVDNTYEYFM+DG KHCCVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPQPLLKRLANICEQAGSWLVVDNTYEYFMFDGLKHCCVEGNHIVNIFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           R+GYIAYP+EV+GF  QLLKVQDNIPICA+I+SQHLAL SL+ GPEWVTE+VKDLV+ R+
Sbjct: 241 RIGYIAYPTEVKGFGDQLLKVQDNIPICAAILSQHLALNSLKLGPEWVTEQVKDLVKCRD 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
           II +ALSPLG  AVKGGEGAIYLWA+LP++  DD +VV WLA RHG+VVIPG ACG  G+
Sbjct: 301 IILQALSPLGLDAVKGGEGAIYLWAKLPDEFADDHQVVLWLARRHGIVVIPGSACGSPGN 360

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
           +RISFGGLVEDDC+AAA+RLR+GLEEL   GMVQ
Sbjct: 361 IRISFGGLVEDDCRAAAERLRKGLEELCSAGMVQ 394

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514633|gb|AFK45378.1| unknown [Lotus japonicus]

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/397 (78%), Positives = 359/397 (90%), Gaps = 1/397 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSYA LA+RALETEMPIMVQ+QE++RGAKN VSLAQGVVYWQPPK A+ KVKELVW+PS
Sbjct: 1   MGSYANLARRALETEMPIMVQMQEVLRGAKNCVSLAQGVVYWQPPKPALGKVKELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           +S+YGADEGLPELR ALVKKL QEN L+KSSVMVTAGANQAFVN+VLTLCDAGDSVVMFA
Sbjct: 61  VSRYGADEGLPELRVALVKKLRQENNLHKSSVMVTAGANQAFVNLVLTLCDAGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTG+T+I VGP S  TL+PD DWLE+ L E+KP PKLV+VVNPGNP+GT
Sbjct: 121 PYYFNAYMSFQMTGITNIHVGPGSPDTLYPDVDWLERILTESKPVPKLVTVVNPGNPTGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIPE LL+RI++LCK AGSWL+VDNTYEYFM+DG KH CVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPESLLQRIANLCKNAGSWLLVDNTYEYFMFDGLKHSCVEGNHIVNIFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIAYPSEVEG + QLLKVQDNIPICASIISQHLAL+SL+ GPEWV ERV+ L +NRE
Sbjct: 241 RVGYIAYPSEVEGLSAQLLKVQDNIPICASIISQHLALHSLEMGPEWVRERVQTLAKNRE 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
           I+ EALSPLGEG+VKGGEGAIYL+A+ P+   DDF+VVRWLA+RHG+ VIPG ACG  G+
Sbjct: 301 IVSEALSPLGEGSVKGGEGAIYLFAKPPKGGYDDFDVVRWLANRHGIAVIPGSACGAAGN 360

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHV 396
           LRISFGGL E DC+AAA+RL++GLEELV +G+VQ+ V
Sbjct: 361 LRISFGGLTESDCRAAAERLKKGLEELVANGLVQDPV 397

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550576|ref|XP_003543661.1| PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Glycine max]

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/393 (80%), Positives = 359/393 (91%), Gaps = 2/393 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGS+ KL++RALETEMP+MVQ+QEL+RGAKNAVSLAQGVVYWQPPK A+EKVKELV +P 
Sbjct: 1   MGSFVKLSRRALETEMPVMVQMQELLRGAKNAVSLAQGVVYWQPPKQALEKVKELVSEPL 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YG DEG+PELR ALVKKL  EN L+KSSVMVT+GANQAFVN+VLTLCD GDSVVMFA
Sbjct: 61  ISRYGNDEGIPELRAALVKKLRDENNLHKSSVMVTSGANQAFVNLVLTLCDPGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP SS TLHPDADWLE+ L ETKP PKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGSSDTLHPDADWLERILSETKPPPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIPE LLKRISDLCK AGSWLVVDNTYEYFMYDG KH CVEG+H+VN+FSFSKA+GMMGW
Sbjct: 181 YIPEPLLKRISDLCKNAGSWLVVDNTYEYFMYDGLKHSCVEGNHIVNVFSFSKAFGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIAYPSEV+ FA QLLKVQDNIPICASI+SQ+LALYSL+ GP+WV ++VK L +NRE
Sbjct: 241 RVGYIAYPSEVKDFAEQLLKVQDNIPICASILSQYLALYSLEVGPQWVVDQVKTLEKNRE 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDFEVVRWLAHRHGVVVIPGGACGCRG 358
           I+ EALSPLGEG+VKGGEGAIYLWA+LP  +  DDF+VVRWLA++HGV VIPG ACGC G
Sbjct: 301 IVLEALSPLGEGSVKGGEGAIYLWAKLPHGNAHDDFDVVRWLANKHGVAVIPGKACGCPG 360

Query: 359 HLRISFGGLVEDDCKAAADRLRRGLEELVKDGM 391
           +LRISFGGL E+DC+AAA+RL++GLEELV+DG+
Sbjct: 361 NLRISFGGLTENDCRAAAERLKKGLEELVRDGL 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442741|ref|XP_002284955.1| PREDICTED: aspartate aminotransferase [Vitis vinifera] gi|297743332|emb|CBI36199.3| unnamed protein product [Vitis vinifera]

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/394 (78%), Positives = 353/394 (89%), Gaps = 1/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           M SY  LA+R +ETE P+MVQIQEL+RGA +A+SLAQGVVYWQPPK A+EKVK+LVW+PS
Sbjct: 1   MSSYGMLARRVVETETPVMVQIQELIRGAGDAMSLAQGVVYWQPPKQALEKVKDLVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           +S+YGAD+GLPELR+ALV+KL QENKLYKSSVMVTAGANQAFVN+VLTLCDAGD VVMFA
Sbjct: 61  VSRYGADDGLPELREALVEKLRQENKLYKSSVMVTAGANQAFVNLVLTLCDAGDLVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP + KTLHPDADWLEK L ETKP PK+V+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPSNPKTLHPDADWLEKILLETKPAPKVVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIPE LLKR +DLC+ AGSWLVVDNTYEYFMYDG KH CVEGDH+VN+FSFSKAYGMMGW
Sbjct: 181 YIPEPLLKRFADLCRNAGSWLVVDNTYEYFMYDGLKHTCVEGDHIVNIFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIAYPS VEG   QLLKVQDNIPICASI SQHLALYSL+ GPEWVT++VK LV NR 
Sbjct: 241 RVGYIAYPSNVEGLGAQLLKVQDNIPICASIFSQHLALYSLEMGPEWVTKQVKSLVINRS 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
           +I +ALSPLG+ +VKGGEGAIYL+A+LP+K+ DDFEVVRWLA +H VVVIPG ACG  G 
Sbjct: 301 LIMDALSPLGKDSVKGGEGAIYLFAKLPDKYHDDFEVVRWLARKHRVVVIPGSACGTPGS 360

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
           LR+SFGGL ED+ + AA RL++G+EELV+DGM+Q
Sbjct: 361 LRVSFGGLREDETQIAAGRLKKGIEELVRDGMLQ 394

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806962|ref|NP_001242056.1| uncharacterized protein LOC100803887 [Glycine max] gi|255635568|gb|ACU18134.1| unknown [Glycine max]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/393 (79%), Positives = 354/393 (90%), Gaps = 2/393 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGS  KL++RALETEMP+MVQ+QEL RGAKNA+SLAQGVVYWQPPK A+EKVKELV +P 
Sbjct: 1   MGSSVKLSRRALETEMPVMVQMQELQRGAKNALSLAQGVVYWQPPKQALEKVKELVSEPL 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YG DEG+PELR ALVKKL  EN L+KSSVMVT+GANQ FVN+VLTLCD GDSVVMFA
Sbjct: 61  ISRYGNDEGIPELRAALVKKLRDENNLHKSSVMVTSGANQVFVNLVLTLCDPGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTG+T+ILVGP SS TLHPDADWLE+ L E KP PKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGITNILVGPGSSDTLHPDADWLERILSENKPAPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           YIPE LLKRISDLCK AGSWLVVDNTYEYFMYDG KH CVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPEPLLKRISDLCKNAGSWLVVDNTYEYFMYDGLKHSCVEGNHIVNVFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIAYPSEV+ FA QLLKVQDNIPICASI+SQ+LALYSL+ GP+WV ++VK L +NRE
Sbjct: 241 RVGYIAYPSEVKDFAEQLLKVQDNIPICASILSQYLALYSLEVGPQWVLDQVKTLEKNRE 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDFEVVRWLAHRHGVVVIPGGACGCRG 358
           I+ EALSPLGEG+VKGGEGAIYLWA+LP+    DDF+VVRWLA++HGV VIPG ACGC  
Sbjct: 301 IVLEALSPLGEGSVKGGEGAIYLWAKLPDLDAHDDFDVVRWLANKHGVAVIPGKACGCPS 360

Query: 359 HLRISFGGLVEDDCKAAADRLRRGLEELVKDGM 391
           +LRISFGGL E+DC+AAA+RL++GLEELV+DG+
Sbjct: 361 NLRISFGGLTENDCRAAAERLKKGLEELVRDGL 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|355755203|gb|AET06149.1| PLP-dependent aminotransferase [Papaver somniferum]

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/393 (76%), Positives = 342/393 (87%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MG+Y KLAKR LETE P+MVQIQE+ R  K+AVSLAQGVVYWQPP+ A+EKVK++V +P 
Sbjct: 1   MGTYMKLAKRVLETESPVMVQIQEIFRSCKDAVSLAQGVVYWQPPEEALEKVKKIVDEPL 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
            S+YG DEGLP LR+AL KKL +ENKLYKSSVMVTAGANQAFVN+VL LCDA D VVMFA
Sbjct: 61  TSRYGGDEGLPALREALTKKLQEENKLYKSSVMVTAGANQAFVNLVLALCDAEDRVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           PYYFNSYMSFQMTG+T ILVGP   KTL PDADWLEK L T+P PKLV++VNPGNPSGTY
Sbjct: 121 PYYFNSYMSFQMTGITDILVGPGDPKTLQPDADWLEKVLSTEPVPKLVNIVNPGNPSGTY 180

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 240
           IPE LLKRISDLCK AGSWLVVDNTYEYFMYDG KH C+EGDH++N+FSFSKAYGMMGWR
Sbjct: 181 IPEPLLKRISDLCKKAGSWLVVDNTYEYFMYDGLKHTCIEGDHILNVFSFSKAYGMMGWR 240

Query: 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300
           VGYIAYP+E +G A QLLKVQDNIPICA I+SQ LAL+SL+TG +WV  +VKDLV+NREI
Sbjct: 241 VGYIAYPTETKGLAEQLLKVQDNIPICAPIVSQRLALFSLETGSDWVRNQVKDLVKNREI 300

Query: 301 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 360
           + +ALSPLG GAVKGGEGAIYLWA+LP+KH DDFEVVRWLA RHGVV+IPG A G  G +
Sbjct: 301 LLDALSPLGVGAVKGGEGAIYLWAKLPDKHQDDFEVVRWLAKRHGVVLIPGSASGGPGCV 360

Query: 361 RISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
           R+SFGGL + DC+ AA RL++GLEELVK GMVQ
Sbjct: 361 RVSFGGLKDGDCEFAALRLKKGLEELVKHGMVQ 393

Source: Papaver somniferum

Species: Papaver somniferum

Genus: Papaver

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115434860|ref|NP_001042188.1| Os01g0178000 [Oryza sativa Japonica Group] gi|15289767|dbj|BAB63467.1| putative aspartate aminotransferase [Oryza sativa Japonica Group] gi|113531719|dbj|BAF04102.1| Os01g0178000 [Oryza sativa Japonica Group] gi|125524650|gb|EAY72764.1| hypothetical protein OsI_00629 [Oryza sativa Indica Group] gi|125569247|gb|EAZ10762.1| hypothetical protein OsJ_00598 [Oryza sativa Japonica Group]

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 289/394 (73%), Positives = 349/394 (88%), Gaps = 1/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGS+ +LA+RA+ETE P+MV++QEL+RG K+ +SLAQGVVYWQPP+ AM K+KE+VW+PS
Sbjct: 1   MGSFGRLARRAVETEAPVMVKMQELLRGNKDVMSLAQGVVYWQPPEAAMNKIKEIVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           ISKYG+D+GLPELR+AL++KL +ENKL KSS+MVT+GANQAFVN+VLTLCDAGD+VVMFA
Sbjct: 61  ISKYGSDDGLPELREALLEKLRRENKLTKSSIMVTSGANQAFVNVVLTLCDAGDAVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFNSYMSFQMTGVT ILVG  + +TLHPD DWLEK L E  P PKLVSVVNPGNPSG 
Sbjct: 121 PYYFNSYMSFQMTGVTDILVGASNPETLHPDVDWLEKVLQENNPIPKLVSVVNPGNPSGA 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
           +IP+ +L+RIS+LC+ AG+WLVVDNTYEYFMYDG +H C+EG+H+VNLFSFSKAYGMMGW
Sbjct: 181 FIPKPMLERISELCRNAGAWLVVDNTYEYFMYDGMEHYCLEGNHIVNLFSFSKAYGMMGW 240

Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGYIA+P+E +G   QLLKVQDNIPICASII Q LALY+L+ GPEW+ ERV+DLV+NRE
Sbjct: 241 RVGYIAHPNEADGLHAQLLKVQDNIPICASIIGQRLALYALEAGPEWIRERVRDLVKNRE 300

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
           ++ EA+SPLG+ +VKGGEGAIYLWA+LPEK  DDFEVVRWLA++HGV VIPG A G  G+
Sbjct: 301 LLMEAMSPLGKDSVKGGEGAIYLWAKLPEKCSDDFEVVRWLANKHGVAVIPGSASGGPGY 360

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
           +R+SFGGL E D + AA+RLRRGL+ELV +GMVQ
Sbjct: 361 IRVSFGGLKESDTRLAAERLRRGLQELVTEGMVQ 394

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
TAIR|locus:2034240	394	VAS1 "reversal of sav3 phenoty	0.982	0.997	0.723	3.6e-160
TIGR_CMR|GSU_0084	391	GSU_0084 "aminotransferase, cl	0.857	0.877	0.296	1.4e-39
UNIPROTKB|E9L7A5	479	E9L7A5 "Bifunctional aspartate	0.887	0.741	0.285	1.1e-30
TAIR|locus:2060435	475	AAT "AT2G22250" [Arabidopsis t	0.887	0.747	0.268	1.1e-30
UNIPROTKB|Q5LRI4	391	SPO2144 "Aminotransferase, cla	0.852	0.872	0.297	1.4e-30
TIGR_CMR|SPO_2144	391	SPO_2144 "aminotransferase, cl	0.852	0.872	0.297	1.4e-30
TIGR_CMR|CBU_0517	423	CBU_0517 "aspartate aminotrans	0.905	0.855	0.263	9.1e-29
TIGR_CMR|NSE_0758	397	NSE_0758 "aspartate aminotrans	0.862	0.869	0.272	2.5e-26
UNIPROTKB|P96847	388	aspB "Possible aspartate amino	0.76	0.783	0.306	6.6e-26
UNIPROTKB|Q0BXZ8	403	aatA "Aspartate aminotransfera	0.745	0.739	0.280	1.3e-25

TAIR|locus:2034240 VAS1 "reversal of sav3 phenotype 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
 Identities = 285/394 (72%), Positives = 340/394 (86%)

Query:     1 MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
             MGS+  L++R L T+MP+M QI+ L+    N +SLAQGVV+WQPP+ A+EKVKELVWDP 
Sbjct:     1 MGSFGMLSRRTLGTDMPVMAQIRSLMAELTNPMSLAQGVVHWQPPQKALEKVKELVWDPI 60

Query:    61 ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
             IS YG DEGLPELR AL+KKL +ENKL  S VMVTAGANQAFVN+V+TLCDAGDSVVMF 
Sbjct:    61 ISSYGPDEGLPELRQALLKKLREENKLTNSQVMVTAGANQAFVNLVITLCDAGDSVVMFE 120

Query:   121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
             PYYFNSYM+FQMTGVT+I+VGP  S TL+PDADWLE+TL E+KPTPK+V+VVNPGNPSGT
Sbjct:   121 PYYFNSYMAFQMTGVTNIIVGPGQSDTLYPDADWLERTLSESKPTPKVVTVVNPGNPSGT 180

Query:   180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
             Y+PE LLKRI+ +CK AG WL+VDNTYEYFMYDG KHCCVEGDH+VN+FSFSK YGMMGW
Sbjct:   181 YVPEPLLKRIAQICKDAGCWLIVDNTYEYFMYDGLKHCCVEGDHIVNVFSFSKTYGMMGW 240

Query:   240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
             R+GYIAY   ++GFAT+L+K+QDNIPICA+IISQ LA+Y+L+ G  W+TERVK LV+NR+
Sbjct:   241 RLGYIAYSERLDGFATELVKIQDNIPICAAIISQRLAVYALEEGSGWITERVKSLVKNRD 300

Query:   300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
             I++EAL PLG+  VKGGEGAIYLWA+LPE H DDF+VVRWLAHRHGVVVIPG A G  G+
Sbjct:   301 IVKEALEPLGKENVKGGEGAIYLWAKLPEGHRDDFKVVRWLAHRHGVVVIPGCASGSPGY 360

Query:   360 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 393
             LR+SFGGL E + +AAA RLR+G+EEL+  GMV+
Sbjct:   361 LRVSFGGLQEVEMRAAAARLRKGIEELLHHGMVE 394

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008483 "transaminase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009641 "shade avoidance" evidence=IMP

GO:0009851 "auxin biosynthetic process" evidence=IMP

GO:0010326 "methionine-oxo-acid transaminase activity" evidence=IDA

GO:0010366 "negative regulation of ethylene biosynthetic process" evidence=IMP

GO:1901997 "negative regulation of indoleacetic acid biosynthetic process via tryptophan" evidence=IDA

TIGR_CMR|GSU_0084 GSU_0084 "aminotransferase, classes I and II" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 106/357 (29%), Positives = 174/357 (48%)

Query:    33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKS 90
             V L Q V  + P +   + +  L+ DP +SKY  DEGLPE+R+ +  +  +     +   
Sbjct:    36 VDLCQAVPDYPPARQLTDYLAALLDDPLVSKYSPDEGLPEVREGVCARYGRVYGAAMNPD 95

Query:    91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP 150
              + +T GA+QAF   ++TLC AGD V++  P YF+  M+  + GV  + +     +   P
Sbjct:    96 QLCLTIGASQAFWLAMVTLCRAGDEVIVPLPAYFDHPMALDILGVRPVYLPFDEERGGVP 155

Query:   151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210
             D   +E+ +   P  + + +V P NP+G   P   ++ +  + +  G  LV+D TY  F+
Sbjct:   156 DPAAVERLIT--PRTRAILLVTPSNPTGVVTPPETIQELHGVARRRGIALVLDETYADFI 213

Query:   211 YDG-RKH-CCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265
               G R H   ++   GDH+++L SF K Y + G+R G +A   E  G A   LK QD + 
Sbjct:   214 PGGERPHDLFLDPRWGDHLIHLMSFGKTYALTGYRAGCLAASKEFIGHA---LKAQDTMA 270

Query:   266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
             +C   I+Q+  LY +     WV E    + R  ++ R   +  G        G  + W R
Sbjct:   271 VCQPRITQYAVLYGVSHLDGWVEENRLMMTRRHDLFRSLFTRPGNPFSLVASGTFFAWVR 330

Query:   326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR 380
              P +     E  R LA   G++ +PG   G     +LR++FG + ++    A +R R
Sbjct:   331 HPLQEGTGREAARRLAVEAGIICLPGEVFGPGLEPYLRLAFGNIRDEAIPGAVERFR 387

GO:0008152 "metabolic process" evidence=ISS

GO:0008483 "transaminase activity" evidence=ISS

UNIPROTKB|E9L7A5 E9L7A5 "Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase" [Petunia x hybrida (taxid:4102)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 110/385 (28%), Positives = 182/385 (47%)

Query:    21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
             Q   LV+     + LA G   +  P   +E     + +   ++Y  + G  ELR A+  K
Sbjct:    94 QATALVQAGVPVIRLAAGEPDFDTPAPIVEAGINAIREGH-TRYTPNAGTMELRSAISHK 152

Query:    81 LNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
             L +EN L Y    ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   T +
Sbjct:   153 LKEENGLSYTPDQILVSNGAKQSIIQAVLAVCSPGDEVLIPAPYWVSYPEMARLADATPV 212

Query:   139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
             ++    S+    D   LE  L  K   +L+ + +P NP+G+  P +LL++I+++      
Sbjct:   213 ILPTSISEDFLLDPKLLESKLTEKS--RLLILCSPSNPTGSVYPRKLLEQIAEIVARHPR 270

Query:   199 WLVV-DNTYEYFMYDGRKH---CCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252
              LV+ D  YE+ +Y    H     + G  D  + +  FSKA+ M GWR+GYIA P     
Sbjct:   271 LLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKH--- 327

Query:   253 FATQLLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALSPLG 309
             F     K+Q      AS ISQ  A+ +L     G E V   VK     R+ + ++   + 
Sbjct:   328 FIAACNKIQSQFTSGASSISQKAAVAALGLGYAGGELVATMVKSFRERRDYLVKSFGEI- 386

Query:   310 EGA-VKGGEGAIYLWARLPEKH---LDDF-------EVVRWLAHRHGVVVIPGGACGCRG 358
             EG  +    GA YL+  L   +   +D F        + R+L  +  V ++PG A G   
Sbjct:   387 EGVKISEPRGAFYLFIDLSSYYGVEVDGFGSINNSESLCRYLLDKAQVALVPGDAFGDDT 446

Query:   359 HLRISFGGLVEDDCKAAADRLRRGL 383
              +RIS+   +    +AA +R+++ L
Sbjct:   447 CIRISYAASLST-LQAAVERIKKAL 470

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0009095 "aromatic amino acid family biosynthetic process, prephenate pathway" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IDA

GO:0033853 "aspartate-prephenate aminotransferase activity" evidence=IDA

GO:0033854 "glutamate-prephenate aminotransferase activity" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

TAIR|locus:2060435 AAT "AT2G22250" [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 103/383 (26%), Positives = 183/383 (47%)

Query:    25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84
             LV+     + LA G   +  PK+  E     + +   ++Y  + G+ ELR+A+ +KL +E
Sbjct:    94 LVQSGVPVIRLAAGEPDFDTPKVVAEAGINAIRE-GFTRYTLNAGITELREAICRKLKEE 152

Query:    85 NKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
             N L Y    ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   T +++  
Sbjct:   153 NGLSYAPDQILVSNGAKQSLLQAVLAVCSPGDEVIIPAPYWVSYTEQARLADATPVVIPT 212

Query:   143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
               S     D   LE  L  K   +L+ + +P NP+G+  P+ LL+ I+ +       LV+
Sbjct:   213 KISNNFLLDPKDLESKLTEKS--RLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVL 270

Query:   203 -DNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256
              D  YE+ +Y    H          +  + +  FSKA+ M GWR+GY+A P  +    + 
Sbjct:   271 SDEIYEHIIYAPATHTSFASLPDMYERTLTVNGFSKAFAMTGWRLGYLAGPKHIVAACS- 329

Query:   257 LLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALSPLGEGAV 313
               K+Q  +   AS I+Q   + +L   + G E V E VK     R+ + ++L  +    +
Sbjct:   330 --KLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKI 387

Query:   314 KGGEGAIYLWARLPEKH---LDDFEVVR-------WLAHRHGVVVIPGGACGCRGHLRIS 363
                +GA YL+      +    + F ++        +   +  V ++PG A G    +RIS
Sbjct:   388 SEPQGAFYLFIDFSAYYGSEAEGFGLINDSSSLALYFLDKFQVAMVPGDAFGDDSCIRIS 447

Query:   364 FGGLVEDDCKAAADRLRRGLEEL 386
             +   + D  +AA +++R+ LE L
Sbjct:   448 YATSL-DVLQAAVEKIRKALEPL 469

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009095 "aromatic amino acid family biosynthetic process, prephenate pathway" evidence=IDA

GO:0033853 "aspartate-prephenate aminotransferase activity" evidence=IDA

GO:0033854 "glutamate-prephenate aminotransferase activity" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

UNIPROTKB|Q5LRI4 SPO2144 "Aminotransferase, classes I and II" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 109/367 (29%), Positives = 169/367 (46%)

Query:    33 VSLAQGVVYWQPPKMAMEKVKEL-VWDPSISKYGADEGLPELRDALVKKLNQE--NKLYK 89
             ++++Q      PP+   + + +  + + S   YG   G  +LR  L  +++      +  
Sbjct:    33 INVSQAAPVEPPPQALRQAMADFALTEDSAHLYGPVLGNADLRAELAAQISHHYGGAVRP 92

Query:    90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
               V +T+G NQAF   +  +   GD V++  P+YFN  M   M GVT + +   +   L 
Sbjct:    93 EQVAITSGCNQAFAATISAITGEGDEVILPTPWYFNHKMWLDMEGVTAVPLA--TGPDLL 150

Query:   150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209
             PD +   + L T P  + +++V P NP G   P  L+    DL    G  L++D TY  F
Sbjct:   151 PDVE-AARALIT-PRTRAIALVTPNNPGGVEYPAELVGAFYDLAAEHGLRLLLDETYRDF 208

Query:   210 -MYDGRKHCCV---EGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264
                 G  H      + D  +V+L+SFSKAY + G RVG +A  S+  G   ++ K  D +
Sbjct:   209 DSRSGAPHDLFTRPDWDKTLVHLYSFSKAYRLTGHRVGALA--SDT-GLLAEIEKFLDTV 265

Query:   265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGGEGAIYLW 323
              IC   I QH AL+ ++   +WV     +++  R  I E +  L  EG    G GA + +
Sbjct:   266 AICPGQIGQHAALWGMRNLGQWVAGERDEILDRRAAIAEGMPALVAEGWTLLGLGAYFAY 325

Query:   324 ARLPEKHLDDFEVVRWLAHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAA 376
                P     D E+ R L    GV+V+PG          G R  LR++F  L         
Sbjct:   326 LEHPFDLPSD-ELARRLVRDAGVLVLPGTMFMPEGDLAGAR-QLRVAFANLDRAGIGQLF 383

Query:   377 DRLRRGL 383
             DRL+ GL
Sbjct:   384 DRLK-GL 389

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_2144 SPO_2144 "aminotransferase, classes I and II" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 109/367 (29%), Positives = 169/367 (46%)

Query:    33 VSLAQGVVYWQPPKMAMEKVKEL-VWDPSISKYGADEGLPELRDALVKKLNQE--NKLYK 89
             ++++Q      PP+   + + +  + + S   YG   G  +LR  L  +++      +  
Sbjct:    33 INVSQAAPVEPPPQALRQAMADFALTEDSAHLYGPVLGNADLRAELAAQISHHYGGAVRP 92

Query:    90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
               V +T+G NQAF   +  +   GD V++  P+YFN  M   M GVT + +   +   L 
Sbjct:    93 EQVAITSGCNQAFAATISAITGEGDEVILPTPWYFNHKMWLDMEGVTAVPLA--TGPDLL 150

Query:   150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209
             PD +   + L T P  + +++V P NP G   P  L+    DL    G  L++D TY  F
Sbjct:   151 PDVE-AARALIT-PRTRAIALVTPNNPGGVEYPAELVGAFYDLAAEHGLRLLLDETYRDF 208

Query:   210 -MYDGRKHCCV---EGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264
                 G  H      + D  +V+L+SFSKAY + G RVG +A  S+  G   ++ K  D +
Sbjct:   209 DSRSGAPHDLFTRPDWDKTLVHLYSFSKAYRLTGHRVGALA--SDT-GLLAEIEKFLDTV 265

Query:   265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGGEGAIYLW 323
              IC   I QH AL+ ++   +WV     +++  R  I E +  L  EG    G GA + +
Sbjct:   266 AICPGQIGQHAALWGMRNLGQWVAGERDEILDRRAAIAEGMPALVAEGWTLLGLGAYFAY 325

Query:   324 ARLPEKHLDDFEVVRWLAHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAA 376
                P     D E+ R L    GV+V+PG          G R  LR++F  L         
Sbjct:   326 LEHPFDLPSD-ELARRLVRDAGVLVLPGTMFMPEGDLAGAR-QLRVAFANLDRAGIGQLF 383

Query:   377 DRLRRGL 383
             DRL+ GL
Sbjct:   384 DRLK-GL 389

GO:0008150 "biological_process" evidence=ND

GO:0008483 "transaminase activity" evidence=ISS

TIGR_CMR|CBU_0517 CBU_0517 "aspartate aminotransferase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 106/402 (26%), Positives = 190/402 (47%)

Query:     7 LAKRALETEMPIMVQIQELVRGAKN----AVSLAQGVVYWQPPKMAMEKVKELVWDPSIS 62
             L+ RA + E  + + + +L R   N     +SL+ G   +  P    +   + + +   +
Sbjct:    34 LSVRAQQLEPSVTLAVSDLARELLNKGHDVISLSAGEPDFDTPDFIKQSAIKAIQE-GFT 92

Query:    63 KYGADEGLPELRDALVKKLNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
             KY   +G P L+ A+V KL ++N L Y+ S ++V+ GA Q+  N+++   +AGD  ++ A
Sbjct:    93 KYTNVDGTPALKAAIVHKLKRDNHLNYEPSEILVSGGAKQSIYNVLMGTLNAGDEAIIPA 152

Query:   121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
             PY+ +     Q+     I++     +        L + +   P  +L+ + +P NPSG  
Sbjct:   153 PYWVSYPPMVQLAEAKPIIISATIDQNFKLTPGQLSQAIT--PQSRLLILNSPNNPSGVA 210

Query:   181 IPERLLKRISDLCKAAGSWLVV-DNTYEYFMYDGRK-----HCCVE-GDHVVNLFSFSKA 233
               E  LK ++D+       L++ D  YEY ++   +     + C E  D  + +   SKA
Sbjct:   211 YTESELKALADVLMEHPQILILSDEIYEYILWGQNRFVNILNVCPELRDRTIIINGASKA 270

Query:   234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL--QTGP-EWVTER 290
             Y M GWR+GY A P  +      + K+Q       + I+Q  A  +L  Q G   ++ E 
Sbjct:   271 YAMTGWRIGYAAGPKSI---IQAMKKIQSQSTSSPNSIAQVAATTALGAQRGDFAYMYEA 327

Query:   291 VKDLVRNREIIREALSPL-GEGAVKGGEGAIYLW----ARLPEKHL-DDFEVVRWLAHRH 344
              K      +++ +AL+ + G   +   +GA YL+    A + +  L DD ++  +L  + 
Sbjct:   328 YKT---RHDLVLKALNQMKGVHCIPA-DGAFYLFPDVSAAIQQLGLEDDIKLGTYLLDKT 383

Query:   345 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
              V V+PG A G  GH+R+S        C  + ++L+  LE L
Sbjct:   384 KVAVVPGSAFGSPGHVRLS--------CATSTEKLQEALERL 417

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

TIGR_CMR|NSE_0758 NSE_0758 "aspartate aminotransferase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 102/374 (27%), Positives = 167/374 (44%)

Query:    21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
             ++ EL    K+ +SL  G   +  P +  E   + + D     Y    G   LR+ +  K
Sbjct:    20 RVCELRARGKDVISLCIGEPDFSTPFLGQEMAIQAIKDCD-DNYSPVAGTMVLREEIAAK 78

Query:    81 LNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
               ++N L+ S   ++V  GA Q   N++  + +  D VV+ APY+  SY           
Sbjct:    79 FVRDNALHYSPHEIVVGNGAKQVLYNVLGAILNPEDEVVLIAPYWV-SYCEIVRIFSGKP 137

Query:   139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
             +V P S+K    D   + + L TK   K + + +P NPSG    E  L+ ++   +A   
Sbjct:   138 VVVP-STKKFRIDITAIREALNTKT--KAILINSPNNPSGVCYEESELRDLASALRAHPQ 194

Query:   199 -WLVVDNTYEYFMYDGRKHCCVE------GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251
               ++ D+ YE+  Y       +       G+ ++ +   SK Y M GWRVGY A P++  
Sbjct:   195 VHIISDDIYEHITYAESSFLNIANVAPELGERIILVNGVSKCYAMTGWRVGYAAIPNKA- 253

Query:   252 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311
                + + ++Q++       I+Q  AL +L++G + ++ER+    R R    E LS L E 
Sbjct:   254 -VISLVCRLQEHSTFGVCTIAQAAALGALRSGADVLSERLAVFARKRNKAVEVLSMLPEL 312

Query:   312 AVKGGEGAIYLW----ARLPEKHLDDFEV------VRWLAHRHGVVVIPGGACGCRGHLR 361
                  +G  YL+    A   +K    FEV        +L   H V V+PG   G  G+ R
Sbjct:   313 CCYKPDGGFYLFLSCSAFFGKKSPSGFEVKTDSDVADYLLEEHAVAVVPGEEFGVPGYFR 372

Query:   362 ISFG---GLVEDDC 372
             IS+     L+E  C
Sbjct:   373 ISYALSMDLLEQAC 386

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

UNIPROTKB|P96847 aspB "Possible aspartate aminotransferase AspB (Transaminase A) (ASPAT) (Glutamic--oxaloacetic transaminase) (Glutamic--aspartic transaminase)" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 101/330 (30%), Positives = 151/330 (45%)

Query:    64 YGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
             Y    G+PELRDA+     + + +     +V++T G++  F+   L   DAGD V M +P
Sbjct:    64 YSVALGIPELRDAIAADYQRRHGITVEPDAVVITTGSSGGFLLAFLACFDAGDRVAMASP 123

Query:   122 YY--FNSYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
              Y  + + +S     V  I   PC  +T   P A  L    E  P  + V V +P NP+G
Sbjct:   124 GYPCYRNILSALGCEVVEI---PCGPQTRFQPTAQMLA---EIDPPLRGVVVASPANPTG 177

Query:   179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKHCCVEGD-HVVNLFSFSKAYG 235
             T IP   L  I+  C A+   L+ D  Y   +Y G  +  C  +   + V + SFSK Y 
Sbjct:   178 TVIPPEELAAIASWCDASDVRLISDEVYHGLVYQGAPQTSCAWQTSRNAVVVNSFSKYYA 237

Query:   236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 295
             M GWR+G++  P+ +   A   L    N  IC  ++SQ +A  S  T PE   E   +L 
Sbjct:   238 MTGWRLGWLLVPTVLRR-AVDCLT--GNFTICPPVLSQ-IAAVSAFT-PEATAEADGNLA 292

Query:   296 R---NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG- 351
                 NR ++ + L  +G   +   +GA Y++A + +   D       L    GV + PG 
Sbjct:   293 SYAINRSLLLDGLRRIGIDRLAPTDGAFYVYADVSDFTSDSLAFCSKLLADTGVAIAPGI 352

Query:   352 GACGCRG--HLRISFGGLVEDDCKAAADRL 379
                  RG   +RISF G    D + A  R+
Sbjct:   353 DFDTARGGSFVRISFAG-PSGDIEEALRRI 381

GO:0005618 "cell wall" evidence=IDA

UNIPROTKB|Q0BXZ8 aatA "Aspartate aminotransferase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 291 (107.5 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 89/317 (28%), Positives = 153/317 (48%)

Query:    18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
             +  +  E+ R   + + L  G   +  P+   E     + +   +KY   +G+PEL++A+
Sbjct:    22 VTTKANEMKRQGLDVIGLGAGEPDFDTPENIKEAAIRAMREGK-TKYTPSDGIPELKEAI 80

Query:    78 VKKLNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV 135
             V K  +EN L YK S V V+ G      N  +   +AGD VV+ APY+ +      + G 
Sbjct:    81 VAKFARENGLTYKPSQVNVSPGGKAVLFNAFMATLNAGDEVVIPAPYWVSYPEMVLLCGA 140

Query:   136 THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV--NPGNPSGTYIPERLLKRISD-L 192
             T + V PC + T +  +   EK LE   TPK   ++  +P NP+G       LK ++D L
Sbjct:   141 TPVAV-PCGADTAYKLSP--EK-LEAAITPKTKWLILNSPSNPTGAAYTGAELKALADVL 196

Query:   193 CKAAGSWLVVDNTYEYFMYDGRKH---CCVEG---DHVVNLFSFSKAYGMMGWRVGYIAY 246
              +    W++ D+ YE+ +YDG ++     VE    D  + +   SKAY M GWR+GY A 
Sbjct:   197 LRHPQVWILTDDMYEHLVYDGFEYKTIAQVEPALYDRTLTMNGVSKAYAMTGWRIGYAAG 256

Query:   247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
             P ++ G   +++    + P C+  ISQ  ++ +L    +++        + R ++ + L+
Sbjct:   257 PEKLIGAMRKVMDQSTSNP-CS--ISQWASVEALNGPQDFLPVFRAAYAKRRNLMVDGLN 313

Query:   307 PLGEGAVKGGEGAIYLW 323
                       EGA Y++
Sbjct:   314 QAAGIVCPKPEGAFYVY 330

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	400
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	7e-94
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	1e-84
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	4e-81
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	2e-69
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	3e-60
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	4e-56
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	4e-37
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	2e-35
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	2e-34
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	9e-34
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	1e-31
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	1e-31
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	4e-31
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	1e-29
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	7e-29
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	1e-28
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	1e-28
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	3e-28
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	2e-27
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	2e-27
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	8e-26
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	1e-25
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	2e-25
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	1e-24
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	1e-22
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	1e-22
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	2e-22
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	2e-21
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	2e-21
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	7e-21
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	1e-20
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	2e-20
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	1e-19
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	6e-19
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	3e-18
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	9e-18
PRK03321	352	PRK03321, PRK03321, putative aminotransferase; Pro	2e-17
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	2e-16
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	3e-16
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	4e-15
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	2e-13
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	5e-13
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	6e-13
PLN02231	534	PLN02231, PLN02231, alanine transaminase	7e-13
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	1e-12
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	1e-12
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	2e-12
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	3e-12
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	4e-12
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	5e-12
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	5e-12
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	8e-12
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	8e-12
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	1e-11
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	3e-11
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	3e-11
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	4e-11
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	6e-11
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	1e-10
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	2e-10
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	2e-10
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	2e-10
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	4e-10
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	8e-10
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	3e-09
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	4e-09
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	1e-08
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	1e-08
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	2e-08
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	2e-08
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	5e-08
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	6e-08
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	2e-07
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	2e-07
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	3e-07
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	3e-07
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	5e-07
PRK14808	335	PRK14808, PRK14808, histidinol-phosphate aminotran	5e-07
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	5e-07
PRK08153	369	PRK08153, PRK08153, histidinol-phosphate aminotran	6e-07
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	6e-07
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	1e-06
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	3e-06
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	3e-06
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	5e-06
PRK05664	330	PRK05664, PRK05664, threonine-phosphate decarboxyl	5e-06
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	5e-06
PRK07366	388	PRK07366, PRK07366, succinyldiaminopimelate transa	8e-06
PRK03317	368	PRK03317, PRK03317, histidinol-phosphate aminotran	1e-05
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	1e-05
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	2e-05
PRK05939	397	PRK05939, PRK05939, hypothetical protein; Provisio	4e-05
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	8e-05
COG2873	426	COG2873, MET17, O-acetylhomoserine sulfhydrylase [	9e-05
pfam01053	382	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP	1e-04
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	1e-04
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	1e-04
PRK08133	390	PRK08133, PRK08133, O-succinylhomoserine sulfhydry	6e-04
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	0.002
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	0.002

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score =  286 bits (734), Expect = 7e-94
 Identities = 135/388 (34%), Positives = 217/388 (55%), Gaps = 27/388 (6%)

Query: 17  PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDA 76
           PI+  + +L+R     +SL QGVV + PP  A+E +   + +P   KY A +G+P L +A
Sbjct: 14  PIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEA 73

Query: 77  LVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT 133
           + +KL Q+N +    + +++VTAG+N AF+N +L + D GD +++  PYYFN  M+  M 
Sbjct: 74  ITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA 133

Query: 134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV--NPGNPSGTYIPERLLKRISD 191
           G   ILV    +  L P+A      +E   TPK  ++V  +P NP+G   PE LL+ ++ 
Sbjct: 134 GCQPILVPTDDNYQLQPEA------IEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQ 187

Query: 192 LCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAY 246
           +C   G + + D  YEYF YDG KH         G+H ++L+S SKAYG   WR+GY+  
Sbjct: 188 ICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI 247

Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
           P         + K+QD I IC  ++SQ+ AL +LQ G  +  + + ++ + R+I+ ++L 
Sbjct: 248 P---IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLG 304

Query: 307 PLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLR 361
            L +   +    GA Y + ++    L+DFE+V+ L   + V VIPG   G    C  +LR
Sbjct: 305 QLQDRCTLHPANGAFYCFLKV-NTDLNDFELVKQLIREYRVAVIPGTTFGMKNGC--YLR 361

Query: 362 ISFGGLVEDDCKAAADRLRRGLEELVKD 389
           I++G L +   K   +RL +GL+ +V+ 
Sbjct: 362 IAYGALQKATAKEGIERLVQGLKTIVQQ 389

Length = 389

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  261 bits (669), Expect = 1e-84
 Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 15/357 (4%)

Query: 33  VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS 90
           + L+ G   + PP   +E +        +  Y  D GLPELR+A+ + L +   +     
Sbjct: 1   IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE 60

Query: 91  SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP 150
            ++VT GA +A   ++  L + GD V++  P Y     + ++ G   + V P   +    
Sbjct: 61  EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPV-PLDEEGGFL 119

Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210
               L +  +T  T KL+ + NP NP+G  + E  L+ +++L K  G  ++ D  Y   +
Sbjct: 120 LDLELLEAAKTPKT-KLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELV 178

Query: 211 YDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
           YDG     +      + V+ L SFSK +G+ G R+GY+  P E      +L K+      
Sbjct: 179 YDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEE--LLERLKKLLPYTTS 236

Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 326
             S +SQ  A  +L  G E + E  +   R R+ + EAL  LG   V    G  +LW  L
Sbjct: 237 GPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296

Query: 327 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRR 381
           PE   DD E +  L    GVVV PG A G    G +R+SF    E++ + A +RL  
Sbjct: 297 PE--GDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  253 bits (649), Expect = 4e-81
 Identities = 112/399 (28%), Positives = 185/399 (46%), Gaps = 26/399 (6%)

Query: 6   KLAKRALETEMPIMVQIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK 63
           +L K        ++ + +      G ++ + L+ G   +  P+  +E   E + +   + 
Sbjct: 2   RLLKVLPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPDFPTPEHIIEAAIEALEEG-GTH 60

Query: 64  YGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           Y    G+PELR+A+ +K  +   L    +  ++VTAGA +A     L L + GD V++  
Sbjct: 61  YTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPD 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLH--PDADWLEKTLETKPTPKLVSVVNPGNPSG 178
           P Y +   + ++ G   + V P   +     PD + LE      P  K + + +P NP+G
Sbjct: 121 PGYPSYEAAVKLAGGKPVPV-PLDEEENGFKPDLEDLEA--AITPKTKAIILNSPNNPTG 177

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-----CVEGDHVVNLFSFSKA 233
               +  LK I +L +     ++ D  YE  +YDG +H          D  + + SFSK 
Sbjct: 178 AVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKT 237

Query: 234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERV 291
           YGM GWR+G++  P   E     L K++  +  CA   +Q+ A+ +L      E V E  
Sbjct: 238 YGMTGWRIGWVVGPP--EELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMR 295

Query: 292 KDLVRNREIIREALSPLGEG-AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350
           ++    R+++ EAL+ +G    VK  EGA YL+ ++PE  LD  E  + L    GV V+P
Sbjct: 296 EEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPE-LLDSEEFAKKLLEEAGVAVVP 354

Query: 351 G---GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           G   G     G++R+S     E   + A  RL R L E 
Sbjct: 355 GSGFGEPPGEGYVRLSLATSEETL-EEALRRLARFLAEY 392

Length = 393

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score =  223 bits (570), Expect = 2e-69
 Identities = 114/382 (29%), Positives = 172/382 (45%), Gaps = 28/382 (7%)

Query: 17  PIMVQIQELVRGAKNA----VSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGADEGLP 71
           PI  +++  + G   A    + L+Q V  Y  PP++ +  + E   DP+   YG  EGLP
Sbjct: 13  PIP-EVRAWLAGYDGADGPLIDLSQAVPGYPPPPEL-LRALAEAAADPAAHLYGPVEGLP 70

Query: 72  ELRDALVKKLNQENKLYK-----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           ELR+A     ++   LY        V +T+G NQAF   ++TL  AGD V++  P+YFN 
Sbjct: 71  ELREAYAAHYSR---LYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNH 127

Query: 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
            M   M G+  + +       L PD    E  +   P  + +++V P NP+G   P  LL
Sbjct: 128 KMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALI--TPRTRAIALVTPNNPTGVVYPPELL 185

Query: 187 KRISDLCKAAGSWLVVDNTYEYFMYD-GRKHCCVE----GDHVVNLFSFSKAYGMMGWRV 241
             + DL +  G  L++D TY  F    G  H         D +V+L+SFSK+Y + G RV
Sbjct: 186 HELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRV 245

Query: 242 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301
           G +           ++ K  D + ICA  I Q    + L    +W      ++ R R+  
Sbjct: 246 GAVVASPA---RIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAF 302

Query: 302 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGH 359
           R   + L  G      GA + + R P       EV R LA   G++ +PG   G    G+
Sbjct: 303 RAVFARL-PGWELLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGY 361

Query: 360 LRISFGGLVEDDCKAAADRLRR 381
           LR++F            +RLR 
Sbjct: 362 LRLAFANADVAGIGELVERLRA 383

Length = 386

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  199 bits (510), Expect = 3e-60
 Identities = 104/343 (30%), Positives = 163/343 (47%), Gaps = 32/343 (9%)

Query: 63  KYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           KY    G+PELR+A+  KL ++N L Y  S V+VT GA QA  N  + L D GD V++ A
Sbjct: 63  KYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPA 122

Query: 121 PYYFNSYMSF-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
           PY+  SY    ++ G   + V P   +       + LE  + T  T K + + +P NP+G
Sbjct: 123 PYWV-SYPEMVKLAGGVPVFV-PTGEENGFKLTVEQLEAAI-TPKT-KALILNSPSNPTG 178

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEG--DHVVNLFSFSK 232
                  L+ I+D+      W++ D  YE  +YDG +            D  + +  FSK
Sbjct: 179 AVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSK 238

Query: 233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVK 292
           AY M GWR+GY A P E+      + K+Q +     + I+Q+ A+ +L    + V E  +
Sbjct: 239 AYAMTGWRLGYAAGPKEL---IKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQ 295

Query: 293 DLVRNREIIREALSPLGEGAVKG-----GEGAIYLWAR----LPEKHLDDFEVVRWLAHR 343
                R+++ + L+      + G      EGA Y++      L +   D  E    L   
Sbjct: 296 AFEERRDLMVDGLN-----EIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEE 350

Query: 344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
            GV V+PG A G  G++R+S+     +D +   +R+ R LE L
Sbjct: 351 AGVAVVPGIAFGAPGYVRLSY-ATSLEDLEEGLERIERFLESL 392

Length = 393

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  187 bits (478), Expect = 4e-56
 Identities = 95/351 (27%), Positives = 157/351 (44%), Gaps = 21/351 (5%)

Query: 42  WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL---YKSSVMVTAGA 98
                   +  K+ +   + + YG  +GLPELR+AL K L +   L    +++V+  +GA
Sbjct: 15  SGTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGA 74

Query: 99  NQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157
                 ++  L  + GD++++ AP Y +    F++ G   +     SS   H D D LE 
Sbjct: 75  GANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYPLYSSNDFHLDFDALEA 134

Query: 158 TLETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH 216
            L+      K+V   +P NP+GT      L+++ DL K     L+VD  Y  F++     
Sbjct: 135 ALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILLLVDEAYAGFVFGSLDA 194

Query: 217 CCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASII 271
                   EG +++ + SFSKA+G+ GWRVGYI   + V    +QL K+    P  +S  
Sbjct: 195 VATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAV---ISQLRKLAR--PFYSSTH 249

Query: 272 SQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328
            Q  A  +L         + E  + +   R+ +R+ L   G  +V   +   +L   L  
Sbjct: 250 LQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGL-SVLPSQAGFFLLTGLDP 308

Query: 329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379
           +       V  L    GV V PG + G  G LRI+  G  E++ +   + +
Sbjct: 309 EAALALAQV--LLEEVGVYVTPGSSFGGPGWLRITVAGGTEEELEELLEAI 357

Length = 357

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score =  139 bits (353), Expect = 4e-37
 Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 32/342 (9%)

Query: 64  YGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           YG   GLPELR+A+   L            +++T+GA QA   ++  L D GD+V++  P
Sbjct: 128 YGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDP 187

Query: 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP--GNPSGT 179
            Y  +  + +  G   I V P     + P+A  LE+ L     PK V  V P   NP+G 
Sbjct: 188 TYPGALQALEALGARVIPV-PVDEDGIDPEA--LEEALAQWK-PKAV-YVTPTFQNPTGV 242

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSK--A 233
            +     K +  L +     ++ D+ Y    YDG     +        V+ L SFSK  A
Sbjct: 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA 302

Query: 234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERV 291
            G+   R+GY+  P E+     +LL+++    +  S +SQ      L +G     +    
Sbjct: 303 PGL---RLGYVVAPPEL---IEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLR 356

Query: 292 KDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 349
           ++  R R+ + EAL+            EG ++LW  LPE  +D  E++   A   GVVV 
Sbjct: 357 REYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPE-GIDARELLA-AALEKGVVVT 414

Query: 350 PGGA-----CGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           P G+        R  LR+SF    E++ +    RL   L E 
Sbjct: 415 PLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456

Length = 459

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  133 bits (338), Expect = 2e-35
 Identities = 106/374 (28%), Positives = 180/374 (48%), Gaps = 51/374 (13%)

Query: 43  QP----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAG 97
           QP    P++  E +K    D  +  Y   +G+PELR+A  K   +    +    +++T G
Sbjct: 39  QPDIKTPEVFFEAIKNY--DEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNG 96

Query: 98  ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKT---LH-PDA 152
            ++A +  ++ +CD GD +++  P+Y N Y  F    GV    + P ++K     H P  
Sbjct: 97  GSEAILFAMMAICDPGDEILVPEPFYAN-YNGFATSAGVK---IVPVTTKIEEGFHLPSK 152

Query: 153 DWLEKTLETKPTPK----LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208
           + +EK      TPK    L+S  NPGNP+G    +  L+ ++++ K    +L+ D  Y  
Sbjct: 153 EEIEK----LITPKTKAILIS--NPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYRE 206

Query: 209 FMYDGRKH---CCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-QD 262
           F+YDG K+     +EG  D V+ + S SK Y   G R+G +   S+ +      +K+ Q 
Sbjct: 207 FVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI--SKNKELIAAAMKLCQA 264

Query: 263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIY 321
              +    + Q  A   L T   +  E  ++  + R+I+ E L+ +  G V +  +GA Y
Sbjct: 265 R--LSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKI-PGVVCEKPKGAFY 321

Query: 322 LWARLPEKHLDDFEVVRWLA---HRHG--VVVIPGG---ACGCRGH--LRISFGGLVEDD 371
           + A+LP    +DF   +WL    + +G  V+V P     A    G   +RI++  L E+D
Sbjct: 322 IIAKLPVDDAEDF--AKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY-VLNEED 378

Query: 372 CKAAADRLRRGLEE 385
            K A + L+  LE+
Sbjct: 379 LKRAMEILKEALEK 392

Length = 397

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score =  131 bits (330), Expect = 2e-34
 Identities = 110/391 (28%), Positives = 187/391 (47%), Gaps = 45/391 (11%)

Query: 21  QIQELVRGA---KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           +I+EL   A   +N +SL  G   +  PK   E  K  + D   + Y  + G+PELR+A+
Sbjct: 21  KIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRAL-DEGWTHYTPNAGIPELREAI 79

Query: 78  VKKLNQENKLYK-----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
            +      K Y       +V+VTAGA +A      +L + GD V++  P +       ++
Sbjct: 80  AEYYK---KFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKI 136

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
                I +         PD D L + + TK T +++ +  P NP+G  + + + K I+D+
Sbjct: 137 AEAKPIRIPLREENEFQPDPDELLELI-TKRT-RMIVINYPNNPTGATLDKEVAKAIADI 194

Query: 193 CKAAGSWLVVDNTYEYFMYDGRKHCCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
            +    +++ D  YE+F+Y+G KH  +     D+ +   SFSK + M GWR+G++  P +
Sbjct: 195 AEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQ 254

Query: 250 VEGFATQLLKVQDNIPICASIIS------QHLALYSLQTGPEW--VTERVKDLVRNREII 301
           V         ++D I + A II       Q   + +L++   W  V E  K+    R+++
Sbjct: 255 V---------IKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLV 305

Query: 302 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGH 359
            + L  +    V   +GA Y++A + E  +   +   WL  +  VVVIPG A G    G+
Sbjct: 306 LKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGY 365

Query: 360 LRISFG----GLVEDDCKAAADRLRRGLEEL 386
           +RIS+      L+E     A +R+ + LEEL
Sbjct: 366 IRISYATSKEKLIE-----AMERMEKALEEL 391

Length = 391

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score =  129 bits (326), Expect = 9e-34
 Identities = 97/334 (29%), Positives = 140/334 (41%), Gaps = 27/334 (8%)

Query: 64  YGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           Y A  GLP LR+A+     Q   +      ++VT G + A +     L D G   ++  P
Sbjct: 65  YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADP 124

Query: 122 YY-FNSYMSFQMTGVTH-ILVGPCSSKTLHP---DADWLEKTLETKPTPKLVSVVNPGNP 176
            Y  N +    + G    + VGP S   L P   +  W   T+          V +P NP
Sbjct: 125 GYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVG-------ALVASPANP 177

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE-GDHVVNLFSFSKAYG 235
           +GT +    L  +S   +A G  LVVD  Y    Y       +E  D    L SFSK +G
Sbjct: 178 TGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFG 237

Query: 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT---ERVK 292
           M GWR+G++  P        +L K+  N+ I AS  +QH AL   +  PE +     R  
Sbjct: 238 MTGWRLGWLVAP---PAAVPELEKLAQNLYISASTPAQHAALACFE--PETLAILEARRA 292

Query: 293 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG 352
           +  R R+ +  AL  LG G     +GA YL+A +     D F   R       V   PG 
Sbjct: 293 EFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGL 352

Query: 353 ACGC---RGHLRISFGGLVEDDCKAAADRLRRGL 383
             G      H+R ++   +    + A +R+ RGL
Sbjct: 353 DFGRHQAGQHVRFAYTQSLP-RLQEAVERIARGL 385

Length = 387

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  123 bits (311), Expect = 1e-31
 Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 63/397 (15%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVY----------WQPPKMAMEKVKEL 55
           + ++RA+  E  I    +++V  A+        V+           +QPP    E +KE 
Sbjct: 3   RASERAMGVEYAI----RDVVLPARELEKKGIKVIRLNIGDPVKFDFQPP----EHMKEA 54

Query: 56  VWDPSISK----YGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTL 109
               +I +    YG  EGLPELR+A+VK+  ++N +  +   V VTA   +A   I   L
Sbjct: 55  YCR-AIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGAL 113

Query: 110 CDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTL-----HPDADWLEKTLETK 162
            D GD +++  P Y  +   + F   GV      P   +T+      PD D + K +  K
Sbjct: 114 LDPGDEILIPGPSYPPYTGLVKFY-GGV------PVEYRTIEEEGWQPDIDDIRKKITEK 166

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV 219
              K ++V+NP NP+G    ++ LK I D+       ++ D  Y+   Y+G KH     +
Sbjct: 167 T--KAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVSPGSL 223

Query: 220 EGD-HVVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLLKVQDNIP------ICASI 270
             D  V+ +   SK Y   GWR+GYI +  P        +L +V++ I       +C + 
Sbjct: 224 TKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEG------KLAEVREAIDKLARIRLCPNT 277

Query: 271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-K 329
            +Q  A+  L    +++ E +K L   R+ I + L+ +   +    +GA Y++ R+ E  
Sbjct: 278 PAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGP 337

Query: 330 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISF 364
             DD E V  + H   V+ + G   G    GH R+ F
Sbjct: 338 WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF 374

Length = 398

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  122 bits (309), Expect = 1e-31
 Identities = 88/363 (24%), Positives = 159/363 (43%), Gaps = 31/363 (8%)

Query: 28  GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87
           G    + L+     + PP   +E ++  +    +++Y  D    ELR AL +     +  
Sbjct: 20  GLPGIIKLSSNENPYGPPPKVIEAIRAAL--DKLNRYP-DPDYRELRAALAEYYGVVDP- 75

Query: 88  YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT 147
              +V+V  G+++    +V    + GD+V++  P +    ++ Q+ G   + V     K 
Sbjct: 76  --ENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKV---PLKE 130

Query: 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY- 206
              D D +   +  +   KLV + NP NP+GT +P   L+ + +     G  +V+D  Y 
Sbjct: 131 FRLDLDAILAAI--RDKTKLVFLCNPNNPTGTLLPREELRALLEALP-EGGLVVIDEAYI 187

Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIP 265
           E+      +       +++ L +FSKA+G+ G RVGY IA P         L KV+    
Sbjct: 188 EFSPESSLEL-LKYPPNLIVLRTFSKAFGLAGLRVGYAIANP----ELIAALNKVRPPFN 242

Query: 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
           +  S  +   A+ +L+   +++ E V+ +   RE +  AL  LG   V   + A ++  R
Sbjct: 243 V--SSPALAAAIAALRD-ADYLEESVERIREERERLYAALKALGLFGVFPSQ-ANFVLVR 298

Query: 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385
           +P+       +   L  +  +V          G+LRI+ G   E+      DRL   L E
Sbjct: 299 VPDAEAAA--LAEALLKKGILVRDCSSVGLLPGYLRITVGTPEEN------DRLLAALRE 350

Query: 386 LVK 388
           ++K
Sbjct: 351 VLK 353

Length = 356

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score =  122 bits (307), Expect = 4e-31
 Identities = 104/389 (26%), Positives = 169/389 (43%), Gaps = 48/389 (12%)

Query: 21  QIQELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVWDPSISKYGADEGLPELRDA 76
           Q   +V+   N +SL  G    QP    P    E  K  +   + + Y  + GL ELR A
Sbjct: 19  QFSNMVQNYDNLISLTIG----QPDFPTPSHVKEAAKRAI-TENYTSYTHNAGLLELRKA 73

Query: 77  LVKKLNQENKLY---KSSVMVTAGANQAFVNIVL-TLCDAGDSVVMFAPYYFNSYMSFQM 132
               +  +  L+   +S ++VT GA++A ++I   T+ + G  V++ AP Y       ++
Sbjct: 74  ACNFVKDKYDLHYSPESEIIVTIGASEA-IDIAFRTILEPGTEVILPAPIYPGYEPIIRL 132

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV--NPGNPSGTYIPERLLKRIS 190
            G   + +    S      A+ LE  +    T K   VV   P NP+G  + +  L+ I+
Sbjct: 133 CGAKPVFID-TRSTGFRLTAEALENAI----TEKTRCVVLPYPSNPTGVTLSKEELQDIA 187

Query: 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH------VVNLFSFSKAYGMMGWRVGYI 244
           D+ K    +++ D  Y   +Y+                 V+N    SK++ M GWR+G++
Sbjct: 188 DVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVIN--GLSKSHSMTGWRIGFL 245

Query: 245 AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVK---DLVRNR 298
             PS +   A  +LKV      CAS ISQ+ AL +L  G    + +  + K   D V NR
Sbjct: 246 FAPSYL---AKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNR 302

Query: 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--C 356
                 L  +G    K   GA YL+  +    +  F+    L    G+ V+PG A     
Sbjct: 303 ------LISMGLDVEK-PTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYG 355

Query: 357 RGHLRISFGGLVEDDCKAAADRLRRGLEE 385
            G++R+S+     +  K   DRL   L++
Sbjct: 356 EGYVRLSY-AYSIETLKEGLDRLEAFLQQ 383

Length = 387

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score =  117 bits (297), Expect = 1e-29
 Identities = 106/369 (28%), Positives = 177/369 (47%), Gaps = 49/369 (13%)

Query: 44  PPKMAMEKVKELVW--DPSISKYGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGAN 99
           PP    E ++EL    DP +  Y  + G PE+R+A+ + LN+     L    +++T GA 
Sbjct: 47  PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106

Query: 100 QAFVNIVL-TLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEK 157
            A +N+ L  + + GD V++FAPY F  Y  +    G   ++V P  + T  PD D LE 
Sbjct: 107 GA-LNVALKAILNPGDEVIVFAPY-FVEYRFYVDNHGGKLVVV-PTDTDTFQPDLDALEA 163

Query: 158 TLETKPTPKLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGS------WLVVDNTYEYF 209
            +    TPK  +V+  +P NP+G    E  LK ++ L +          +L+ D  Y   
Sbjct: 164 AI----TPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREI 219

Query: 210 MYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG---------FATQLL 258
           +YDG +   +    D+ + ++SFSK+  + G R+GYIA   E+E          FA ++L
Sbjct: 220 VYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRIL 279

Query: 259 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318
                  + A  + Q +    L       T  V    RNR+++ + L+ LG   VK  +G
Sbjct: 280 GF-----VNAPALMQRVVAKCLD-----ATVDVSIYKRNRDLLYDGLTELGFECVKP-QG 328

Query: 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD-CKAAAD 377
           A YL+ + PE+  DD       A +H ++++PG   GC G+ R+S+   V+ +  + +  
Sbjct: 329 AFYLFPKSPEE--DDVAFCE-KAKKHNLLLVPGSGFGCPGYFRLSY--CVDTETIERSLP 383

Query: 378 RLRRGLEEL 386
              +  +E 
Sbjct: 384 AFEKLAKEY 392

Length = 394

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score =  115 bits (290), Expect = 7e-29
 Identities = 98/340 (28%), Positives = 165/340 (48%), Gaps = 20/340 (5%)

Query: 58  DPSISKYGADEGLPELRDALVKKLNQENKL-YK--SSVMVTAGANQAFVNIVLTLCDAGD 114
           D + S Y    GL ELR A    + ++  L Y   + ++VT GA +A    +  + + GD
Sbjct: 57  DANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGD 116

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKT-LETKPTPKLVSVVN 172
            V++ AP Y        + G   + +    +   L P+   LEK  LE     K V +  
Sbjct: 117 KVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEM--LEKAILEQGDKLKAVILNY 174

Query: 173 PGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLF 228
           P NP+G TY  E+ +K ++D+ K    +++ D  Y    Y G  H  +     D  + + 
Sbjct: 175 PANPTGVTYSREQ-IKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILIN 233

Query: 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 288
             SK++ M GWR+G I  P+E   F  QL+K    +   A+ ++Q  A+ +L  G +   
Sbjct: 234 GLSKSHAMTGWRIGLIFAPAE---FTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDAL 290

Query: 289 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVV 347
              K+ ++ R+ I E ++ LG   +K  +GA Y++A++P   + D F+ ++  A +  V 
Sbjct: 291 PMKKEYIKRRDYIIEKMTDLGFKIIK-PDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVA 349

Query: 348 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385
            IPG A G    G++R+S+   +E   K A  RL+  +EE
Sbjct: 350 FIPGAAFGPYGEGYVRLSYAASME-TIKEAMKRLKEYMEE 388

Length = 391

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score =  115 bits (289), Expect = 1e-28
 Identities = 87/398 (21%), Positives = 165/398 (41%), Gaps = 43/398 (10%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQG----VVYWQPPKMAMEKVKELVWDPSI 61
            LAK+  + E+ IM +I  L +   + + L+ G    +        A E  K+       
Sbjct: 5   FLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKK-----GH 59

Query: 62  SKYGADEGLPELRDALVKKLNQENKLYK---SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
           ++Y    G  EL + ++K    +N       + +M T GA       + ++ D GD V++
Sbjct: 60  TRYTDSGGDVELIEEIIK-YYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVII 118

Query: 119 FAPYYFNSYM-SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177
             PY F  Y    +M G   I++          +   LE  + +K   K + + +P NP+
Sbjct: 119 HEPY-FTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKT--KAIILNSPNNPT 175

Query: 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY----------DGRKHCCVEGDHVVNL 227
           G    +  L+ I+ +      +++ D  Y+ F +           G        +  +  
Sbjct: 176 GAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP------ERTITF 229

Query: 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-VQDNIPICASIISQHLALYSLQTGPEW 286
            SFSK + M GWR+GY+  P     +  +  K + + I   A  ISQ  A+Y+L+     
Sbjct: 230 GSFSKDFAMTGWRIGYVIAPD----YIIETAKIINEGICFSAPTISQRAAIYALKHRDTI 285

Query: 287 VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346
           V    ++  +  E   + +  +   ++   +G+IY +  + +  L   E    L     V
Sbjct: 286 VPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHV 345

Query: 347 VVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRR 381
           +VIPG   G  G  G++R++   +  +  + A +R+ +
Sbjct: 346 LVIPGKAFGESG-EGYIRLA-CTVGIEVLEEAFNRIEK 381

Length = 384

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score =  115 bits (289), Expect = 1e-28
 Identities = 112/401 (27%), Positives = 179/401 (44%), Gaps = 42/401 (10%)

Query: 6   KLAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP-- 59
           +LA R    E    M +  + Q L R  ++ + +  G    +P   A E V E       
Sbjct: 2   RLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIG----EPDFTAPEPVVEAAARALR 57

Query: 60  -SISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSV 116
             +++Y +  GL  LR+A+     +   L      ++VTAGA+ A +   L L + GD V
Sbjct: 58  RGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEV 117

Query: 117 VMFAPYY-FNSYMSFQMTGVTHIL-VGPCSSKTLHPD---ADWLEKTLETKPTPKLVSVV 171
           +M  P Y  N +      G   ++  GP     L      A W E+T       + V + 
Sbjct: 118 LMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERT-------RGVLLA 170

Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE-GDHVVNLFSF 230
           +P NP+GT I    L+RI +  +A G + +VD  Y+   YD      +  GD V+ + SF
Sbjct: 171 SPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSF 230

Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE- 289
           SK + M GWR+G++  P   E       K+  N+ ICAS ++QH AL   +  P+ +   
Sbjct: 231 SKYFNMTGWRLGWLVVP---EALVGTFEKLAQNLFICASALAQHAALACFE--PDTLAIY 285

Query: 290 --RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA---RLPEKHL-DDFEVVRWLAHR 343
             R  +  R R+ I  AL  LG       +GA Y++A    +      D   + + + H 
Sbjct: 286 ERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHD 345

Query: 344 HGVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRR 381
            GVV++PG   G    R ++R+S+   +    + A  RL +
Sbjct: 346 AGVVLVPGRDFGPHAPRDYIRLSYATSM-SRLEEAVARLGK 385

Length = 388

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  113 bits (286), Expect = 3e-28
 Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 42/339 (12%)

Query: 69  GLPELRDALVKKLNQENKLYKSS-----VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           G+PELR+AL + ++   +L+  +     + VT+   QA +     L   GD VV   P +
Sbjct: 62  GIPELREALARYVS---RLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLW 118

Query: 124 FNSYMSFQMTG--VTHILVGPCSSK-TLHPDADWLEKTLETKPTP--KLVSVVNPGNPSG 178
            N   + ++ G  V  + +       TL  D D L   +    TP  + + + +P NP+G
Sbjct: 119 PNLVAAPKILGARVVCVPLDFGGGGWTL--DLDRLLAAI----TPRTRALFINSPNNPTG 172

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--------EGDHVVNLFSF 230
                  L+ I   C+  G W+V D  YE   Y                  D ++ + SF
Sbjct: 173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP--GGRAPSFLDIAEPDDRIIFVNSF 230

Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER 290
           SK + M GWR+G++  P  +     +L  ++ N   C +   Q  A+ +L  G ++V E 
Sbjct: 231 SKNWAMTGWRLGWLVAPPALGQVLEKL--IEYNTS-CVAQFVQRAAVAALDEGEDFVAEL 287

Query: 291 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350
           V  L R+R+ + +AL  L    V   +GA+Y + R+P    D   + + L    G+ + P
Sbjct: 288 VARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIP-GVTDSLALAKRLVDEAGLGLAP 346

Query: 351 GGACGCRGH--LRISF---GGLVEDDCKAAADRLRRGLE 384
           G A G  G   LR  F      ++     A +RLRR L 
Sbjct: 347 GTAFGPGGEGFLRWCFARDPARLD----EAVERLRRFLA 381

Length = 382

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score =  111 bits (278), Expect = 2e-27
 Identities = 86/341 (25%), Positives = 146/341 (42%), Gaps = 27/341 (7%)

Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           E +  LV+    S      G   LR A+  +    +      VM T G+++A   ++  L
Sbjct: 38  EDLDALVFRDGPS-----LGGEGLRAAIADRWRGGDA---HVVMTTHGSSEAIYLVLTAL 89

Query: 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
              GD VV+  P Y +       TG         + +   PD D L   L   P  + V 
Sbjct: 90  LRPGDEVVVVDPAYHSLSHLAVATGCEVRPWPLLAVRGFRPDLDALRALL--TPRTRAVV 147

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEGDHVVNL 227
           V  P NP+G  +  R L  + +    +G+ L+ DN +   ++D           D V++ 
Sbjct: 148 VNFPHNPTGASVTPRELDELLERAARSGAVLLWDNAFADLVHDAPPLPDPSALYDRVISF 207

Query: 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWV 287
            + SKA+G+ G RVG+   P+++     +L++++D   +  S + + LA  +++     +
Sbjct: 208 GTLSKAFGLPGLRVGWCVGPADL---LAELVRLRDYTTLSLSPLVELLAEVAVEHADALI 264

Query: 288 TERVKDLVRNREIIRE--ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345
             R+ +   NR  + +  A  P         EG +  + R P  H D  ++ R L  RHG
Sbjct: 265 GPRLAEARANRRRLLDWAAAHP-DVVRCTPPEGGVAAFPRFPG-HADVTDLCRRLLARHG 322

Query: 346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           V+++PG   G    +R+ FGG   +        LR GL  L
Sbjct: 323 VLLVPGSCFGAADRMRLGFGGSSAE--------LRAGLARL 355

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score =  111 bits (279), Expect = 2e-27
 Identities = 87/349 (24%), Positives = 139/349 (39%), Gaps = 68/349 (19%)

Query: 64  YGADEGLPELRDA---LVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           YG  EG PE ++A   L + +  EN      ++ T GA  A   ++  L + GD V+   
Sbjct: 58  YGWIEGSPEFKEAVASLYQNVKPEN------ILQTNGATGANFLVLYALVEPGDHVISVY 111

Query: 121 PYYFNSYMSFQMTGVT-HILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGN 175
           P Y   Y   +  G              L  +  WL    E     +P  KL+ + N  N
Sbjct: 112 PTYQQLYDIPESLGAEVDYW-------QLKEENGWLPDLDELRRLVRPNTKLICINNANN 164

Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF------- 228
           P+G  +    L+ I ++ ++  ++++ D  Y     DG          + +L+       
Sbjct: 165 PTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG------STPSIADLYEKGISTN 218

Query: 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 288
           S SK Y + G RVG+IA   EV      L K +D   ICA +    LA  +L+       
Sbjct: 219 SMSKTYSLPGIRVGWIAANEEV---IDILRKYRDYTMICAGVFDDMLASLALE------- 268

Query: 289 ERVKDLVRNREIIREALSPLGE--------GAVKGGEGAI-YLWARLPEKHLDDFEVVRW 339
            R   L RNR+I+R  L+ L E          VK    +  ++   +        +    
Sbjct: 269 HRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM---PSEDFCLK 325

Query: 340 LAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR--LRRGLEEL 386
           L    GV+++PG      GH+RI +            D   L++GL++L
Sbjct: 326 LLKETGVLLVPGNRFDLEGHVRIGY----------CCDTETLKKGLKKL 364

Length = 373

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score =  107 bits (268), Expect = 8e-26
 Identities = 91/342 (26%), Positives = 141/342 (41%), Gaps = 43/342 (12%)

Query: 32  AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-- 89
           AV+L QG      P   +E  +E +    +++Y    G+PELR A+     Q  + Y   
Sbjct: 26  AVNLGQGFPDEDGPPEMLEAAQEAIAG-GVNQYPPGPGIPELRAAIAA---QRRRRYGLE 81

Query: 90  ----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVGPCS 144
               + V+VT GA +A    VL L + GD V++  PYY +SY     M G   + V    
Sbjct: 82  YDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYY-DSYAAVIAMAGAHRVPV---- 136

Query: 145 SKTLHP-------DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
              L P       D D L   +   P  + + V +P NP+GT +    L  I++L     
Sbjct: 137 --PLVPDGRGFALDLDALRAAV--TPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHD 192

Query: 198 SWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE-VE 251
             ++ D  YE+ ++DG +H  +       +  V + S +K + + GW++G+   P+  + 
Sbjct: 193 LLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIA 252

Query: 252 GF--ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
               A Q L      P       Q    ++L     WV      L   R+ +   L+  G
Sbjct: 253 AVRAAKQYLTYVGGAPF------QPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAG 306

Query: 310 EGAVKGGEGAIYLWARL-PEKHLDDFEVVRWLAHRHGVVVIP 350
              V    G  +L A   P  + D  E  R L  R GV  IP
Sbjct: 307 FE-VHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIP 347

Length = 387

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score =  107 bits (268), Expect = 1e-25
 Identities = 100/353 (28%), Positives = 151/353 (42%), Gaps = 43/353 (12%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G P LR A++ KL + N L+   + + V  GA QA    ++   +AGD V++ 
Sbjct: 64  TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIP 123

Query: 120 APYYFNSY--MSFQMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTPKLVSVV--N 172
           APY+  SY  M     G   I+   C  +    L P+A      LE   TP+   ++   
Sbjct: 124 APYWV-SYPDMVLANDGTPVIV--ACPEEQGFKLTPEA------LEAAITPRTRWLILNA 174

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLV-VDNTYEYFMYDGRK--HCCVEGDH------ 223
           P NP+G       L+ ++D+       LV  D+ Y++  +D     H             
Sbjct: 175 PSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVL 234

Query: 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 283
           V N    SK Y M GWR+GY A P+        + K+Q     C S ISQ  A  +L   
Sbjct: 235 VTN--GVSKTYAMTGWRIGYAAGPA---DLIAAINKLQSQSSSCPSSISQAAAAAALNGD 289

Query: 284 PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA--------RLPE-KHLD-D 333
             +VTE V    + R+     L+ +   +    +GA YL+           PE K L+ D
Sbjct: 290 QSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETD 349

Query: 334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
            +VV +L    GV V+ G A G   + R+S      +  + A  R+ R +  L
Sbjct: 350 QDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI-ATSLETLEEACARIERAVAAL 401

Length = 402

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  105 bits (265), Expect = 2e-25
 Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 20/334 (5%)

Query: 64  YGADEGLPELRDALVKKLNQENKL-Y--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           Y A+ GL ELR  + K L +   + Y     ++VT GA+QA    +  + + GD V++  
Sbjct: 53  YTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVE 112

Query: 121 PYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179
           P  F SY     + G   + V              +E  +  K   K + + +P NP+G 
Sbjct: 113 PS-FVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKT--KAILLCSPNNPTGA 169

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEG--DHVVNLFSFSKAYG 235
            + +  L+ I+ + +     ++ D  Y    YD        ++G  +  + +  FSK + 
Sbjct: 170 VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFA 229

Query: 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 295
           M GWR+G+IA P         +LK+     +CA  ++Q  AL +L+ G + V        
Sbjct: 230 MTGWRLGFIAAPVYFSEA---MLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYR 286

Query: 296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---G 352
           + R     + + +G      G GA Y +  +    L   E    L     V V+PG   G
Sbjct: 287 KRRNFFVTSFNEIGLTCHVPG-GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG 345

Query: 353 ACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
             G  G +R S+   +E   + A  R++R +E  
Sbjct: 346 ESG-EGFIRCSYATSLE-QLQEAMKRMKRFVENK 377

Length = 378

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score =  103 bits (259), Expect = 1e-24
 Identities = 66/256 (25%), Positives = 125/256 (48%), Gaps = 22/256 (8%)

Query: 63  KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122
           KY   EG PELR+ ++K L  ++       ++TAGA ++   ++      GD+ V   P 
Sbjct: 61  KYPPPEGFPELRELILKDLGLDD----DEALITAGATESLYLVMRAFLSPGDNAVTPDPG 116

Query: 123 YF--NSYMSFQMTGVTHILV--GPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
           Y   +++ S     V  + +    C+ K L P+         T+    L+ +++P NP G
Sbjct: 117 YLIIDNFASRFGAEVIEVPIYSEECNYK-LTPELVKENMDENTR----LIYLIDPLNPLG 171

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238
           +   E  +K  +++ +   ++L+ D TY  F  +         +H V  +SFSK +GM G
Sbjct: 172 SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAG 231

Query: 239 WRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR- 296
            R+G  +A P  +E    + + + D   +  ++I+Q  A+  L+   EW+ +R++     
Sbjct: 232 LRIGAVVATPDLIE--VVKSIVIND---LGTNVIAQEAAIAGLKVKDEWI-DRIRRTTFK 285

Query: 297 NREIIREALSPLGEGA 312
           N+++I+EA+  + EG 
Sbjct: 286 NQKLIKEAVDEI-EGV 300

Length = 380

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score = 98.6 bits (246), Expect = 1e-22
 Identities = 84/364 (23%), Positives = 152/364 (41%), Gaps = 43/364 (11%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLYKSSVMVTAGANQA 101
               A E VK+ +     + Y    G    R+A+ + L+     KL    V++T+G +QA
Sbjct: 49  TDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108

Query: 102 FVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADW----- 154
               +  L + G ++++  P +  +++  +F    V            L P+ DW     
Sbjct: 109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLY--------DLLPEKDWEIDLD 160

Query: 155 -LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
            LE +L  + T  +V V+NP NP G+      L++I+++ +  G  ++ D  Y + ++  
Sbjct: 161 GLE-SLADEKTVAIV-VINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGD 218

Query: 214 RKHCCV-EGDH---VVNLFSFSKAYGMMGWRVGYIAY--PSEV--EGFATQLLKVQDNIP 265
                +        V++L   SK + + GWR+G+I    P  +  +     L  +   I 
Sbjct: 219 APFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRIL 278

Query: 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEGAI 320
             A+I+   L      T  E+   ++  L  N E+  E L       + G      EGA+
Sbjct: 279 GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELK-----DIPGLVCPKPEGAM 333

Query: 321 YLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
           YL  +L  +      DD +    LA    V+ +PG A G    +RI+   + E   + A 
Sbjct: 334 YLMVKLELELFPEIKDDVDFCEKLAREESVICLPGSAFGLPNWVRITI-TVPESMLEEAC 392

Query: 377 DRLR 380
            R++
Sbjct: 393 SRIK 396

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 98.1 bits (245), Expect = 1e-22
 Identities = 104/382 (27%), Positives = 158/382 (41%), Gaps = 56/382 (14%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY- 88
             A++L+QG   +  P   +E +   +     ++Y    G+  LR+A+  K  +   LY 
Sbjct: 30  HGAINLSQGFPDFDGPPYLVEALAYAM-AAGHNQYPPMTGVAALREAIAAKTAR---LYG 85

Query: 89  -----KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVGP 142
                 S + VTAGA +A    +L L   GD V++F P Y +SY  + ++ G      G 
Sbjct: 86  RQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSY-DSYAPAIELAG------GR 138

Query: 143 CSSKTLHPDA---DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
                L P     DW        P  +L+ +  P NPSGT      ++ +  L      +
Sbjct: 139 AVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIY 198

Query: 200 LVVDNTYEYFMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252
           ++ D  YE+ ++DG  H  V       E   VV+  SF K Y + GW+VGY   P+ +  
Sbjct: 199 VLSDEVYEHIVFDGAGHASVLRHPELRERAFVVS--SFGKTYHVTGWKVGYCVAPAAL-- 254

Query: 253 FATQLLKVQDNIPICASIISQH-LALYSLQTGPEWVTE-----RVKDLVRNREIIREAL- 305
            + +  KV        +  +Q  LA Y L+  PE   E     + K     R+  R AL 
Sbjct: 255 -SAEFRKVHQYNTFTVNTPAQLALADY-LRAEPEHYLELPAFYQAK-----RDRFRAALA 307

Query: 306 -SPLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGA-CG-CRGH-- 359
            S      +   EG  +          LDD E  +WL   HGV  IP          H  
Sbjct: 308 NSRF---KLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRL 364

Query: 360 LRISFGGLVEDDCKAAADRLRR 381
           +R+ F    E+   AAA+RL +
Sbjct: 365 VRLCFAK-QEETLDAAAERLCQ 385

Length = 386

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 87/343 (25%), Positives = 134/343 (39%), Gaps = 44/343 (12%)

Query: 69  GLPELRDALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
           GLPELR A+     +   L    ++ VMVT+GA +A    +L L + GD VV+F P Y +
Sbjct: 64  GLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLY-D 122

Query: 126 SYMSF-QMTGVTHILVGPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVNPGNPSGTY 180
           +Y+   +  G    LV       L P   W      L    +P  K V + NP NP+G  
Sbjct: 123 AYLPLIRRAGGVPRLV------RLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKV 175

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVEG--DHVVNLFSFSKAYG 235
            P   L  +++ C+   +  + D  +E+ ++DGR+H     + G  +  V + S  K + 
Sbjct: 176 FPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFS 235

Query: 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 295
           + GW+VG++     +      L K    +        Q    Y L    ++      DL 
Sbjct: 236 LTGWKVGFVCAAPPL---LRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLA 292

Query: 296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGA 353
           R+R+ +   L  +G   V   +G  +L   L       DD    R L    GV  IP  A
Sbjct: 293 RSRDRLAAGLRRIGF-PVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSA 351

Query: 354 ----CGCRGHLRISFGGLVEDDCK------AAADRLRRGLEEL 386
                     +R  F        K       A +RL       
Sbjct: 352 FYEEDPVTSVVRFCF-------AKRDATLDEAVERLAAARRRR 387

Length = 387

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 94.8 bits (236), Expect = 2e-21
 Identities = 93/381 (24%), Positives = 165/381 (43%), Gaps = 57/381 (14%)

Query: 43  QP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--------KLNQENKLYKSSVM 93
            P P   +EK+ E+   P    Y    G+P LR A+ +         ++ E     S  +
Sbjct: 41  GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPE-----SEAI 95

Query: 94  VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCSSKTLHPD 151
           VT G+ +   +++L   D GD+V++  P Y        + G  V  +         L   
Sbjct: 96  VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSV--------PLVEG 147

Query: 152 ADW---LEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE 207
            D+   LE+ + E+ P PK++ +  P NP+   +     +++  L K     +V D  Y 
Sbjct: 148 VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA 207

Query: 208 YFMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 262
             +YDG K      V G  D  V  F+ SK+Y M GWR+G++    E+     ++    D
Sbjct: 208 DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHD 267

Query: 263 N---IPICASIISQHLALYSLQTGPEWVTERVKDLVRN-REIIREALSPLGEGAVKGGEG 318
                P+      Q  A+ +L+ G +     + +  +  R+++ + L   G   V+  + 
Sbjct: 268 YGTFTPL------QVAAIAALE-GDQQCVRDIAEQYKRRRDVLVKGLHEAG-WMVEMPKA 319

Query: 319 AIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
           ++Y+WA++PE    +   E  + L +   V V PG   G  G   + F  L+E+      
Sbjct: 320 SMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRF-ALIENR----- 373

Query: 377 DRLR---RGLEELV-KDGMVQ 393
           DR+R   RG++ +   DG++ 
Sbjct: 374 DRIRQAIRGIKAMFRADGLLP 394

Length = 395

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score = 94.3 bits (235), Expect = 2e-21
 Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 47/343 (13%)

Query: 42  WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101
           + PP  A E ++       + +Y  D    EL+ AL      + +     +++  G+++ 
Sbjct: 31  FGPPPKAKEALRAEA--DKLHRY-PDPDPAELKQALADYYGVDPE----QILLGNGSDEI 83

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLE 160
              ++    + GD+V++  P       ++ M  ++  + G    K   P D D      +
Sbjct: 84  IELLIRAFLEPGDAVLVPPP-------TYSMYEISAKIHGAEVVKV--PLDEDGQLDLED 134

Query: 161 TKPT----PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTYEYFMYDG-- 213
                   PKLV + +P NP+G  +    ++ + +        LVV D  Y  F  +   
Sbjct: 135 ILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLER--TPEDALVVVDEAYGEFSGEPST 192

Query: 214 ----RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269
                ++      +++ L + SKA+G+ G R+GY    +E+      L KV+    +  S
Sbjct: 193 LPLLAEY-----PNLIVLRTLSKAFGLAGLRIGYAIANAEI---IDALNKVRAPFNL--S 242

Query: 270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 329
            ++Q  A+ +L+   +++ + V+++   RE + + L  L    V   +   ++  R P  
Sbjct: 243 RLAQAAAIAALRD-DDFIEKTVEEINAERERLYDGLKKLPGLEVYPSDAN-FVLIRFPRD 300

Query: 330 HLDDFEVVRWLAHRHGVVVIP-GGACGCRGHLRISFGGLVEDD 371
               FE         G++V       G    LRI+ G   E+D
Sbjct: 301 ADALFE----ALLEKGIIVRDLNSYPGLPNCLRITVGTREEND 339

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 93.3 bits (232), Expect = 7e-21
 Identities = 93/367 (25%), Positives = 153/367 (41%), Gaps = 54/367 (14%)

Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
             V EL    +   YG ++G P LR+A+ +  +   ++    + ++ GA      +  +L
Sbjct: 57  NAVDELASPETFRGYGPEQGYPFLREAIAEN-DYRGRIDPEEIFISDGAKCDVFRL-QSL 114

Query: 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG----------PCSSKT-LHPDADWLEKT 158
               ++V +  P Y     S  M G   +L            PC+++    P+       
Sbjct: 115 FGPDNTVAVQDPVYPAYLDSNVMAGRAGVLDDDGRYSKITYLPCTAENNFIPE------- 167

Query: 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD------ 212
           L  +P   ++ + +P NP+GT + +  LK + D     GS ++ D  Y  F+ D      
Sbjct: 168 LPEEPHIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHS 227

Query: 213 -----GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-NIPI 266
                G + C +E        SFSK  G  G R+G+   P E+  +A     +QD     
Sbjct: 228 IFEIPGARFCAIE----FR--SFSKTAGFTGVRLGWTVVPKELT-YADGHSVIQDWERRQ 280

Query: 267 C-----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 320
           C     AS   Q  A       G + + E +   + N  I+R+AL   G   V GGE A 
Sbjct: 281 CTKFNGASYPVQRAAEAGYAGEGLQPILEAISYYMENARILRKALEAAGF-KVYGGEHAP 339

Query: 321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRIS-FGGLVEDDCKAAA 376
           YLW + PE  +  ++   +L + + VV  PG   G  G  G +R S FG    ++   A 
Sbjct: 340 YLWVKTPEG-ISSWDFFDFLLYEYHVVGTPGSGFGPSG-EGFVRFSAFGK--RENIIEAC 395

Query: 377 DRLRRGL 383
           +R++  L
Sbjct: 396 ERIKEAL 402

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 91.5 bits (228), Expect = 1e-20
 Identities = 73/293 (24%), Positives = 108/293 (36%), Gaps = 42/293 (14%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           D    ELR A          L  +SV+   GA +A   +   L  A   V++ AP Y   
Sbjct: 46  DPEYDELRAAAAAYY----GLPAASVLPVNGAQEAIYLLPRLL--APGRVLVLAPTYSEY 99

Query: 127 YMSFQMTG--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184
             +++  G  V  +           PD D L   LE      L+ V NP NP+G  IP  
Sbjct: 100 ARAWRAAGHEVVEL-----------PDLDRLPAALEEA---DLLVVCNPNNPTGRLIPPE 145

Query: 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGY 243
            L  ++   +A G WLVVD  +  F  D            +V L S +K +G+ G R+G+
Sbjct: 146 TLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGF 205

Query: 244 -IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302
            +A+P+ +      L       P   +  +      +L     W       L   R  + 
Sbjct: 206 VVAHPALIARLREALG------PWTVNGPALAAGRAALADT-AWQAATRARLAAERARLA 258

Query: 303 EALSPLGEGAVKGG---------EGAIYLWARLPEKH--LDDFEVVRWLAHRH 344
             L+ LG   V GG           A  L   L  +   + DF+    L  R+
Sbjct: 259 ALLARLGGLRVVGGTALFLLVRTPDAAALHEALARRGILIRDFDNFPGLDPRY 311

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 91.7 bits (228), Expect = 2e-20
 Identities = 98/400 (24%), Positives = 166/400 (41%), Gaps = 42/400 (10%)

Query: 6   KLAKRALETEMP-IMVQIQELVRGAK----NAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           KLA R +E   P +  +I +     K    + +SL  G      PK  +E + +   +P 
Sbjct: 1   KLADR-IENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPE 59

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLY------KSSVMVTAGANQAFVNIVLTLCDAGD 114
             +Y + EG+   R A+    +   + +      ++ V+   G+ +   +I L   + GD
Sbjct: 60  NHRYPSYEGMLAYRQAVA---DWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGD 116

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT-----PKLVS 169
            V++  P Y    +     G      G      L  +  +L    +  P       KL+ 
Sbjct: 117 IVLVPDPGYPVYRIGTLFAG------GEPYEMPLKEENGFLPD-FDAIPEDIAKKAKLMF 169

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEG--DHV 224
           +  P NP+G   P +  K + +  K     +  DN Y    +DG K      V+G  D  
Sbjct: 170 INYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVG 229

Query: 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP 284
           +   S SK Y M GWR+G     +++      L KV+ N+        Q+ A+ +L    
Sbjct: 230 IEFHSLSKTYNMTGWRIGMAVGNADL---IAGLGKVKTNVDSGVFQAIQYAAIAALNGPQ 286

Query: 285 EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344
           + V E  K   R R+++ EAL  +G   V+  +   Y+W  +PE +    E    L    
Sbjct: 287 DVVKEIRKIYQRRRDLLLEALKKIGI-DVEKPKATFYVWVPVPEGY-TSAEFAARLLEET 344

Query: 345 GVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRR 381
           GVVV PG   G  G  G++RIS   + ++  + A  R+++
Sbjct: 345 GVVVTPGVGFGEYG-EGYIRISL-TVPDERLEEAVARIKK 382

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 89.5 bits (222), Expect = 1e-19
 Identities = 99/376 (26%), Positives = 155/376 (41%), Gaps = 47/376 (12%)

Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-- 88
           +A++L+QG   + P    +E V   + D   ++Y    G+  LR+AL +K     +LY  
Sbjct: 30  DALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAPMAGIAALREALAEKTE---RLYGA 85

Query: 89  ----KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPC 143
                S V V A A++     +  L   GD V+ F P  F+SY    ++ G T     P 
Sbjct: 86  RYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPS-FDSYAPIVRLQGAT-----PV 139

Query: 144 SSKTLHPD--ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
           + K    D   +W E      P  +++ V  P NPS T      L R++ L +     ++
Sbjct: 140 AIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVIL 199

Query: 202 VDNTYEYFMYDGRKHCCVE-----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256
            D  YE+ ++DG +H  +       +  V + SF K+Y + GWRVGY   P+E+     +
Sbjct: 200 SDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAEL---MDE 256

Query: 257 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL--SPLGEGAVK 314
           + KV   +   A    QH A       P           R R+++   L  S      + 
Sbjct: 257 IRKVHQFMVFSADTPMQH-AFAEALAEPASYLGLGAFYQRKRDLLARELAGSRF---ELL 312

Query: 315 GGEGAIYLWARLPEKHLD---DFEVVRWLAHRHGVVVIPGGACGCRGH----LRISFGGL 367
             EG+ ++ AR   +H     D + V  L     V  IP  A    G     +R+SF   
Sbjct: 313 PSEGSFFMLARF--RHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS-- 368

Query: 368 VEDDC--KAAADRLRR 381
            +DD      A RL  
Sbjct: 369 -KDDATLVEGARRLCS 383

Length = 384

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 87.6 bits (217), Expect = 6e-19
 Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 41/365 (11%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           ++AKR  + +  I  Q+  L      A++L QG   +  P    E   + + D   ++Y 
Sbjct: 31  QVAKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYA 88

Query: 66  ADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122
              G+PEL  A+ ++  ++  L    +  V VT+G  +A    +L L + GD V++FAP+
Sbjct: 89  RGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 148

Query: 123 YFNSYMSFQMTGVTHILVGPCSSKTLH-PDADWLEKTLETKPTPKLVSVV--NPGNPSGT 179
           Y +   +  M G     V      TL  PD    E  L+   T K  +++   P NP+G 
Sbjct: 149 YDSYEATLSMAGAKIKTV------TLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGK 202

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV------------VNL 227
                 L+ I+ LCK        D  Y+   +        EGDH+            V +
Sbjct: 203 MFTREELELIASLCKENDVLAFTDEVYDKLAF--------EGDHISMASLPGMYERTVTM 254

Query: 228 FSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW 286
            S  K + + GW++G+ IA P    G    + +    +    +   Q  A+ +L+    +
Sbjct: 255 NSLGKTFSLTGWKIGWAIAPPHLTWG----VRQAHSFLTFATATPMQWAAVAALRAPESY 310

Query: 287 VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA-RLPEKHLDDFEVVRWLAHRHG 345
             E  +D    ++I+ E L  +G   V    G  ++     P    +D     +L    G
Sbjct: 311 YEELKRDYSAKKDILVEGLKEVG-FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVG 369

Query: 346 VVVIP 350
           V  IP
Sbjct: 370 VAAIP 374

Length = 413

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 85.5 bits (212), Expect = 3e-18
 Identities = 94/377 (24%), Positives = 146/377 (38%), Gaps = 67/377 (17%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--------KLNQENKLYKSSVMVT 95
            P+  ++K+ E   DP   +Y A +G+P LR A           KLN +     + V+ T
Sbjct: 44  TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPD-----TQVVAT 98

Query: 96  AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL 155
            G+ + F N+   +   GD ++   P Y      F M G      G   S    PD ++ 
Sbjct: 99  LGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAG------GVIRSVPAEPDEEFF 152

Query: 156 EKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210
              LE     + P P  + V  P NP+         K +    K     ++ D  Y    
Sbjct: 153 -PALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIY 211

Query: 211 YD-----------GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
           +D           G K   VE        S SK + M GWR+G+       E     L +
Sbjct: 212 FDGNPPPSVLQVPGAKDVTVE------FTSMSKTFSMAGWRMGFAV---GNERLIAALTR 262

Query: 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG--- 316
           V+  +   A    Q  A  +L  GP+     +++L + R   R+ L    E   + G   
Sbjct: 263 VKSYLDYGAFTPIQVAATAAL-NGPQDCIAEMRELYKKR---RDVLV---ESFGRAGWDI 315

Query: 317 ---EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVE 369
                +++ WA +PE   HL   E  + L  +  V V PG   G  G  ++RI    LVE
Sbjct: 316 PPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRI---ALVE 372

Query: 370 DD--CKAAADRLRRGLE 384
           ++   + AA  ++R L 
Sbjct: 373 NEQRIRQAARNIKRFLS 389

Length = 405

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 84.0 bits (208), Expect = 9e-18
 Identities = 100/373 (26%), Positives = 176/373 (47%), Gaps = 50/373 (13%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALV----KKLNQENKLYKSSVMVTAGANQ 100
           P+  ++K+ E    P    Y   +G+ +LR A+     +K N +    ++ V+ T G+ +
Sbjct: 48  PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-ETEVVATMGSKE 106

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-LHPDADW----- 154
            +V++V  + + GD  ++  P Y     +F       IL G    K  L  + D+     
Sbjct: 107 GYVHLVQAITNPGDVAIVPDPAYPIHSQAF-------ILAGGNVHKMPLEYNEDFELDED 159

Query: 155 -----LEKTL-ETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE 207
                LEK L E+ P PK V VVN P NP+   + +   +R+  L K    +++ D  Y 
Sbjct: 160 QFFENLEKALRESSPKPKYV-VVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA 218

Query: 208 YFMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 262
              +DG K      VEG  D  V  ++ SK+Y M GWRVG++    ++ G A + +K   
Sbjct: 219 DITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVG-ALKKIKSWL 277

Query: 263 NIPICASI-ISQHLALYSLQTGPEWVTERVKDLVRNR-EIIREALSPLGEGAVKGGEGAI 320
           +  +   I ++  +AL     G +   E +++  R R +++ E+ +  G    K    ++
Sbjct: 278 DYGMFTPIQVAATIAL----DGDQSCVEEIRETYRKRRDVLIESFANAGWELQK-PRASM 332

Query: 321 YLWARLPEK--HLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDD--CK 373
           ++WA++PE   HL   E  + L     V V PG   G  G   ++RI+   L+E++   +
Sbjct: 333 FVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYG-DEYVRIA---LIENENRIR 388

Query: 374 AAADRLRRGLEEL 386
            AA  +++ L+EL
Sbjct: 389 QAARNIKKFLKEL 401

Length = 403

>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 103/329 (31%), Positives = 140/329 (42%), Gaps = 44/329 (13%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           D G  ELR AL + L     +    V V  G+      +V      GD V+ FA   F +
Sbjct: 56  DMGAVELRAALAEHLG----VPPEHVAVGCGSVALCQQLVQATAGPGDEVI-FAWRSFEA 110

Query: 127 YMSF-QMTGVTHILVGPCSSKTLHPDADWL-----EKTLETKPTPKLVSVVNPGNPSGTY 180
           Y    Q+ G T + V P +    H D D +     ++T       +L+ V NP NP+GT 
Sbjct: 111 YPILVQVAGATPVQV-PLTPDHTH-DLDAMAAAITDRT-------RLIFVCNPNNPTGTV 161

Query: 181 IPERLLKRISDLCKAAGSWLVV-DNTYEYFMYDGRKHCCVE--GDH--VVNLFSFSKAYG 235
           +    L R  D        LVV D  Y  ++ D      +E   DH  VV L +FSKAYG
Sbjct: 162 VTPAELARFLD--AVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYG 219

Query: 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 295
           + G RVGY     EV      L KV   +P   + ++Q  A+ SL    E + ERV  +V
Sbjct: 220 LAGLRVGYAVGHPEV---IAALRKVA--VPFSVNSLAQAAAIASLAAEDE-LLERVDAVV 273

Query: 296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 355
             R+ +R AL     G       A ++W  L E+  D        A   GVVV P    G
Sbjct: 274 AERDRVRAAL--RAAGWTVPPSQANFVWLPLGERTADFAAA----AAEAGVVVRPFAGEG 327

Query: 356 CRGHLRISFGGLVEDDC-KAAADRLRRGL 383
               +R++ G   E+D    AA   R GL
Sbjct: 328 ----VRVTIGAPEENDAFLRAARAWRAGL 352

Length = 352

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 79.6 bits (197), Expect = 2e-16
 Identities = 91/368 (24%), Positives = 151/368 (41%), Gaps = 60/368 (16%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--------KLNQENKLYKSSVMVTA 96
           P   +E + + V DP   +Y + EG+ E R A+          +L+ E     + V+   
Sbjct: 46  PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPE-----TEVISLI 100

Query: 97  GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT-GVTHILVGPCSSKTLHPDADWL 155
           G+ +   +I L   + GD V++  P Y    +      G  + +  P     L  +  +L
Sbjct: 101 GSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFM--P-----LKEENGFL 153

Query: 156 EKTLETKPT-----PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210
              L+  P       KL+ +  P NP+G        + + D  K     +  D  Y    
Sbjct: 154 PD-LDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIA 212

Query: 211 YD-----------GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLL 258
           YD           G K   +E        S SK Y M GWR+G+ +     + G    L 
Sbjct: 213 YDGYKPPSFLEVPGAKDVGIE------FHSLSKTYNMTGWRIGFAVGNADLIAG----LG 262

Query: 259 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR-EIIREALSPLGEGAVKGGE 317
           KV+ N+        Q   + +L  GP+ V E ++ + + R +I+ E L  LG   V+  +
Sbjct: 263 KVKSNVDSGVFQAIQEAGIAAL-NGPQEVVEELRKIYQERRDILVEGLRKLGL-EVEPPK 320

Query: 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDD-CK 373
              Y+WA +P+ +    E    L  + GVVV PG   G  G  G+ RI+    V D+  +
Sbjct: 321 ATFYVWAPVPKGY-TSAEFATLLLDKAGVVVTPGNGFGEYG-EGYFRIAL--TVPDERIE 376

Query: 374 AAADRLRR 381
            A +R+++
Sbjct: 377 EAVERIKK 384

Length = 385

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 79.5 bits (197), Expect = 3e-16
 Identities = 67/239 (28%), Positives = 100/239 (41%), Gaps = 48/239 (20%)

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD-----------GRKHCCVEG 221
           P NP+GT + +  LK   D  K  GS ++ D  YE F+ D           G + C +E 
Sbjct: 185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIE- 243

Query: 222 DHVVNLF-SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI--------C----- 267
                 F SFSK  G  G R  Y   P E++G  +      + + +              
Sbjct: 244 ------FRSFSKTAGFTGTRCAYTVVPKELKGKTSD----GEGVSLNSLWNRRQSTKFNG 293

Query: 268 ASIISQH--LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
            S I Q    A+YS + G   + E +   + N +IIRE L   G   V GG  A Y+W +
Sbjct: 294 VSYIVQRAAEAVYSPE-GKAQIKELIDYYMENAKIIREGLESAGF-EVYGGVNAPYIWVK 351

Query: 326 LPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRIS-FGGLVEDDCKAAADRLR 380
            P+  +  ++    L     VV  PG   G  G  G+ R+S FG    ++   A +R++
Sbjct: 352 TPD-GMSSWDFFDKLLQEANVVGTPGSGFGPSG-EGYFRLSAFGSR--ENVLEAMERIK 406

Length = 409

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 75.7 bits (186), Expect = 4e-15
 Identities = 70/262 (26%), Positives = 126/262 (48%), Gaps = 18/262 (6%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104
           P+  ++ ++E+V    ++ Y  D    +LR+ L +  +    +  +++ V  G+++    
Sbjct: 37  PEEVIKNIQEIVKSSQVNIY-PDPTAEKLREELARYCS----VVPTNIFVGNGSDEIIHL 91

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164
           I+L   + GD V+   P +    +  ++ G   I V     +    D     K +E K  
Sbjct: 92  IMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVK--LKEDYTYDVGSFIKVIE-KYQ 148

Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV 224
           PKLV + NP NP+G+ I    + +I  + K+ G  +VVD  Y  F  +       E +++
Sbjct: 149 PKLVFLCNPNNPTGSVIEREDIIKI--IEKSRGI-VVVDEAYFEFYGNTIVDVINEFENL 205

Query: 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP 284
           + L + SKA+G+ G RVGY      +  +   L+K   NI    + +SQ +AL  L+TG 
Sbjct: 206 IVLRTLSKAFGLAGLRVGYAVANENILKY-LNLVKSPYNI----NSLSQVIALKVLRTGV 260

Query: 285 EWVTERVKDLVRNREIIREALS 306
             + ERV  ++  RE + + LS
Sbjct: 261 --LKERVNYILNERERLIKELS 280

Length = 351

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 89/358 (24%), Positives = 149/358 (41%), Gaps = 63/358 (17%)

Query: 69  GLPELRDALVKKL--NQENKL-YKSSVMV-TAGANQAFVNIVLTLCDAGDSVVMFAPYY- 123
           GLP  ++AL + +   + NK+ +  + +V TAGA  A   ++  L + GD+ ++  PYY 
Sbjct: 87  GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYP 146

Query: 124 -FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNPGNPSG 178
            F+  + ++ TGV  + +   SS         LE+  +         K V + NP NP G
Sbjct: 147 GFDRDLKWR-TGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLG 205

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD------------GRKHCCVEGD---- 222
           T      L  + D   A    L+ D  Y   ++D             RK      D    
Sbjct: 206 TTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRK--LENTDVSNR 263

Query: 223 -HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFATQ-----LLKVQDNIPICASIISQHL 275
            H+V  +S SK  G+ G+RVG I    E V   AT+     L+  Q          +Q+L
Sbjct: 264 VHIV--YSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQ----------TQYL 311

Query: 276 --ALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL- 331
             AL S +     ++ E  K L + ++ +   L   G   +K   G ++ W  +  +HL 
Sbjct: 312 LSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAG-LFCWVDM--RHLL 368

Query: 332 ------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRR 381
                  + E+ + + +   + + PG +C C   G  R+ F  + E+    A  RL+ 
Sbjct: 369 KSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKS 426

Length = 468

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 69.8 bits (171), Expect = 5e-13
 Identities = 84/362 (23%), Positives = 141/362 (38%), Gaps = 34/362 (9%)

Query: 44  PPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLY---KSSVMVTAGAN 99
           P     E++           YG    G+ E  +A+ +  N  + +       V++  G+ 
Sbjct: 46  PADFVREEMVHTANQKE--SYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQ 103

Query: 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
              V++ +   + GD +++  P Y       QM G T   +         PD + + +  
Sbjct: 104 DGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPE-- 161

Query: 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-- 217
           E     K++ +  PGNP      E   K +    K     +V D  Y  F +DG K    
Sbjct: 162 EIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISF 221

Query: 218 -CVEGDH--VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN---IPICASII 271
             V G     V + S SK+Y + G R+GY+    E+    TQ     D    +PI     
Sbjct: 222 LSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPI----- 276

Query: 272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL 331
            Q  A  +L+ G  +  +        R+ + +     G    K   G++++WA +P K  
Sbjct: 277 -QKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPA-GSMFVWAEIP-KGW 333

Query: 332 DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389
                   L  R  VVV PG A G    G +RI+   LV+D+     + L++ +E +   
Sbjct: 334 TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIA---LVQDE-----EVLQQAVENIRNS 385

Query: 390 GM 391
           G+
Sbjct: 386 GI 387

Length = 399

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 69.2 bits (170), Expect = 6e-13
 Identities = 78/315 (24%), Positives = 129/315 (40%), Gaps = 27/315 (8%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-- 146
              ++   G        +  L   GD VV+  P Y   Y + ++ G   ++  P      
Sbjct: 83  PEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNG-RKVIENPLVEDDG 141

Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               D D LEK        KL  + NP NP+G    +  L++I++LC   G  ++ D  +
Sbjct: 142 RYEIDFDALEKAFV-DERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIH 200

Query: 207 EYFMYDGRKHCCVEG------DHVVNLFSFSKAYGMMGWRVGYIAYPSE--VEGFATQLL 258
              +  G KH           D+ + L S SK + + G +  YI   +      F  +L 
Sbjct: 201 ADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK 260

Query: 259 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGE 317
           +   + P    II+   A Y    G  W+ E ++ L  NR+ + + L+    G  V   +
Sbjct: 261 RNGLHGPSALGIIA-TEAAY--NQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQ 317

Query: 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFG---GLVEDD 371
           G    W    E  LDD E+  +L     V + PG   G  G  G +R++F     ++E+ 
Sbjct: 318 GTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEG-SGFVRLNFACPRAILEE- 375

Query: 372 CKAAADRLRRGLEEL 386
              A +RL+R L++ 
Sbjct: 376 ---ALERLKRALKKR 387

Length = 388

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 69.6 bits (170), Expect = 7e-13
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 47/232 (20%)

Query: 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCVE- 220
           T + + V+NPGNP+G  + E   + I + CK  G  L+ D  Y+  +Y  D + H   + 
Sbjct: 271 TVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKV 330

Query: 221 ------GDHVVNLFSF---SKA-YGMMGWRVGYIAYPSEVEGFAT----QLLKVQDNIPI 266
                 G+  ++L SF   SK  YG  G R GY+    EV GF +    Q+ KV  ++ +
Sbjct: 331 ARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM----EVTGFTSDVREQIYKVA-SVNL 385

Query: 267 CASIISQHLALYSLQTGP---------EWVTER---VKDLVRNREIIREALSPLGEGAVK 314
           C++I  Q LA  SL   P          ++ E+   +  L R  + + +AL+ L      
Sbjct: 386 CSNISGQILA--SLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN 443

Query: 315 GGEGAIYLWAR--LPEKHLDDFEV---------VRWLAHRHGVVVIPGGACG 355
             EGA+YL+ R  LP+K +   E           + L +  G+VV+PG   G
Sbjct: 444 KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFG 495

Length = 534

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 74/337 (21%), Positives = 138/337 (40%), Gaps = 24/337 (7%)

Query: 47  MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGANQAFVN 104
           +A + + E V     + Y    G+   R A+   L+ +   +L    V +T G   A   
Sbjct: 53  IAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEI 112

Query: 105 IVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
           I+  L     ++++  P +    +Y  F    + H  + P   K    D D +E  +  +
Sbjct: 113 IIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLP--EKGWEVDLDAVE-AIADE 169

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222
            T  +V ++NPGNP G+      L +I++  +  G  ++ D  Y + ++ G K     G 
Sbjct: 170 NTIAMV-IINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVF-GSKPFVPMGL 227

Query: 223 H-----VVNLFSFSKAYGMMGWRVGYIAY--PS---EVEGFATQLLKVQDNIPICASIIS 272
                 V+ L S SK + + GW +G++    PS   ++   A  + K  +  P   + I 
Sbjct: 228 FASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQ 287

Query: 273 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLP---- 327
             +     +T  ++ ++ +  L        + L  +      +  EGA +   +L     
Sbjct: 288 AAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLL 347

Query: 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF 364
           E   DD E    LA    ++++PG   G +  LRI+F
Sbjct: 348 EDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITF 384

Length = 409

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 87/357 (24%), Positives = 144/357 (40%), Gaps = 65/357 (18%)

Query: 66  ADEGLPELRDAL---------VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV 116
           AD G+ E ++A          VK ++   ++  S      G+  A   +     + GD  
Sbjct: 79  ADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHS-----IGSKPALAMLPSCFINPGDVT 133

Query: 117 VMFAPYYFNSYMSFQMTGV-THILVGPCSSKTLH------PDADWLEKTLETKPTPKLVS 169
           +M  P Y        +TG  T    G   +  L       PD D + K  + K   KL+ 
Sbjct: 134 LMTVPGY-------PVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPK--DIKEKAKLLY 184

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEG--DHVV 225
           +  P NP+G    +   + + D  K     +V D  Y    +DG+      V G  +  V
Sbjct: 185 LNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGV 244

Query: 226 NLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQDN------IPICASIISQHLALY 278
            + S SKAY M GWR+ ++      V+ FAT    V+DN      I I      Q   +Y
Sbjct: 245 EIHSLSKAYNMTGWRLAFVVGNELIVKAFAT----VKDNNDSGQFIAI------QKAGIY 294

Query: 279 SLQTGPEWVTERVKDLVRNR-EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--DF- 334
           +L   PE +TE++++    R + + + L+ +G  A   G G  YL+ + P+       F 
Sbjct: 295 ALDH-PE-ITEKIREKYSRRLDKLVKILNEVGFKAEMPG-GTFYLYVKAPKGTKSGIKFE 351

Query: 335 ---EVVRWLAHRHGVVVIPGGACGCRGHLRIS--FGGLVEDDCKAAADRLRRGLEEL 386
              E  ++L     +  +P    G    LR S  F    E++     + ++R L ++
Sbjct: 352 NAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406

Length = 410

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score = 68.3 bits (168), Expect = 2e-12
 Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 40/263 (15%)

Query: 150 PDADWLE--KTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
            +A W      + +K TP  K + ++NP NP+G    + LL+ I ++ +     +  D  
Sbjct: 150 EEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEI 209

Query: 206 YEYFMYDGRKHCCV---EGDHVVNLFS-FSKAYGMMGWRVGYIAY-------PSEVEGFA 254
           Y+  +YDG  H  +     D +   F+  SKAY + G+RVG++            +EG  
Sbjct: 210 YDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEG-- 267

Query: 255 TQLLKVQDNIPICASIISQHLALYSLQT---GPEWVTERVKD---LVRNREIIREALSPL 308
              L +  ++ +CA++ +QH    ++QT   G + + E +     L   R+   E L+ +
Sbjct: 268 ---LDMLASMRLCANVPAQH----AIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI 320

Query: 309 -GEGAVKGGEGAIYLWARL-PEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRI 362
            G   VK  +GA+Y + +L P+ +   DD + V  L  +  V+++ G         H RI
Sbjct: 321 PGVSCVK-PKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRI 379

Query: 363 SFGGL-VEDDCKAAADRLRRGLE 384
               L   DD + A  R+ R L 
Sbjct: 380 VT--LPRVDDLEEAIGRIGRFLS 400

Length = 404

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 65/242 (26%), Positives = 94/242 (38%), Gaps = 36/242 (14%)

Query: 70  LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
             EL D L      +  L    VM  AG+++     VL        +V   P Y   + +
Sbjct: 76  DLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRA 135

Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP----ERL 185
               G   +   P  +   H     ++  L   P   L+ + NP NP+GT  P    E L
Sbjct: 136 ADAQGA-PVAKVPLRADGAHD----VKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWL 190

Query: 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRV 241
           L       K AGS L+VD  Y +F  D      V+       ++ L +FSK YGM G R+
Sbjct: 191 LAN-----KPAGSVLLVDEAYIHF-SDAPS--VVDLVAQRKDLIVLRTFSKLYGMAGMRL 242

Query: 242 GY-IAYP---SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 297
           G   A P   +++  F    L      P+ A+       L SL   P+ V +R  +    
Sbjct: 243 GLAAARPDLLAKLARFGHNPL------PVPAA----AAGLASL-RDPKLVPQRRAENAAV 291

Query: 298 RE 299
           RE
Sbjct: 292 RE 293

Length = 370

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 67.1 bits (164), Expect = 4e-12
 Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 56/336 (16%)

Query: 64  YGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           Y    GL   R A+ + L+++   +L    + +TAG  QA   I+  L   G ++++  P
Sbjct: 90  YSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRP 149

Query: 122 YY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADW---LE--KTLETKPTPKLVSVVNPG 174
            Y  + +   F    V H          L P+  W   LE  + L  + T  +V ++NP 
Sbjct: 150 GYPLYEARAVFSGLEVRHF--------DLLPERGWEVDLEGVEALADENTVAMV-IINPN 200

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGD--HVVNLFSF 230
           NP G+      L +I++  +  G  ++ D  Y++  +  +      V G+   V+ L S 
Sbjct: 201 NPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSI 260

Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-EWVTE 289
           SK + + GWR+G+IA              +     +  SI +      ++ T P  +V  
Sbjct: 261 SKRWVVPGWRLGWIA--------TCDPNGILKETKVVDSIRNYL----NISTDPATFVQG 308

Query: 290 RVKDLVRN--REIIREALSPLGEGA---------VKG------GEGAIYLWARLPEKHL- 331
            +  ++ N   E   + L  L E A         +K        EG++++  +L    L 
Sbjct: 309 AIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLS 368

Query: 332 ---DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF 364
              DD +    LA    VVV+PG A G +  LRI+F
Sbjct: 369 GIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITF 404

Length = 430

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score = 66.7 bits (163), Expect = 5e-12
 Identities = 63/331 (19%), Positives = 124/331 (37%), Gaps = 14/331 (4%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL-NQENKLYKSSVMVTAGANQAF 102
                M+ +K+ +     + Y    G    R+A+     N +  +    V++ +G + A 
Sbjct: 49  TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108

Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
              +  L +AG ++++  P +       +  G+   L      K+   D   LE  ++ K
Sbjct: 109 EMCIAALANAGQNILVPRPGFPLYRTLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK 168

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222
                + V NP NP G+    + L+ I  + +     ++ D  Y   ++ G     V   
Sbjct: 169 T--AALVVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPVASL 226

Query: 223 H----VVNLFSFSKAYGMMGWRVGYIAYPSE---VEGFATQLLKVQDNIPICASIISQHL 275
                +++    +K + + GWR+G+I        +      L+K+   I    +I+   L
Sbjct: 227 SSNVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGAL 286

Query: 276 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL---- 331
               L+T  E+    +  L  N  +   AL+ +         GA+Y+   +  +H     
Sbjct: 287 PSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLQPVMPSGAMYMMVGIEMEHFPEFK 346

Query: 332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 362
           +D E    L     V  +PG      G  R+
Sbjct: 347 NDVEFTERLIAEQSVFCLPGSCFEYPGFFRV 377

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 66.3 bits (163), Expect = 5e-12
 Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 51/244 (20%)

Query: 22  IQELVR--GAKNAVSLAQ-----GVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELR 74
           I+ELVR  G  + + LA      G     P   A+E ++       + +Y  D    EL+
Sbjct: 22  IEELVREYGIADIIKLASNENPLG-----PSPKAIEAIRAAA--DELHRY-PDGSGFELK 73

Query: 75  DALVKK--LNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQ 131
            AL +K  ++ E       +++  G+++    +       GD V+  + + F  Y ++ Q
Sbjct: 74  AALAEKFGVDPER------IILGNGSDEILELLARAYLGPGDEVIY-SEHGFAVYPIAAQ 126

Query: 132 MTGVTHILVGPCSSKTLHPDADW---LEKTLE-TKPTPKLVSVVNPGNPSGTYIP----E 183
             G   + V         P  D+   L+  L    P  +LV + NP NP+GTY+P    E
Sbjct: 127 AVGAKPVEV---------PAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVE 177

Query: 184 RLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKH---CCVEGDHVVNLFSFSKAYGMMGW 239
           R L  +          +V+D  Y EY      +       +  +VV   +FSKAYG+ G 
Sbjct: 178 RFLAGVPPDV-----LVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGL 232

Query: 240 RVGY 243
           RVGY
Sbjct: 233 RVGY 236

Length = 367

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score = 66.1 bits (161), Expect = 8e-12
 Identities = 90/364 (24%), Positives = 153/364 (42%), Gaps = 36/364 (9%)

Query: 28  GAKNAVSLAQG--VVY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
             K  +SL  G    Y  +    +A E V + +     + Y    GLP+ R A+ + L++
Sbjct: 29  NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSR 88

Query: 84  E--NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHIL 139
           +   KL    V +T+G  QA    +  L   G ++++  P +  +    +F+   V ++ 
Sbjct: 89  DLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVD 148

Query: 140 VGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
           + P   K    D D +E  L  + T  LV ++NPGNP G     + LK+I++  +     
Sbjct: 149 LLP--EKGWEVDLDAVE-ALADQNTVALV-IINPGNPCGNVYSYQHLKKIAETAEKLKIL 204

Query: 200 LVVDNTYEYFMYDGRKHC--CVEGD--HVVNLFSFSKAYGMMGWRVGY--IAYPSEV--- 250
           ++ D  Y +  +         V G    V+ L S SK + + GWR+G+     PS     
Sbjct: 205 VIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRD 264

Query: 251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI----IRE--- 303
                ++ K  D +   A+ I   +     QT   +  + +  L ++ +I    I+E   
Sbjct: 265 PKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPC 324

Query: 304 ---ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 360
                 P G  AV      + L   L E   DD +    LA    V+++PG A G +  L
Sbjct: 325 ITCPHKPEGSMAV-----MVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWL 379

Query: 361 RISF 364
           RI+F
Sbjct: 380 RITF 383

Length = 409

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 65.9 bits (161), Expect = 8e-12
 Identities = 77/349 (22%), Positives = 140/349 (40%), Gaps = 24/349 (6%)

Query: 20  VQIQELVRGAK---NAVSLAQG-VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRD 75
             ++ L+RG       V  + G V   +P   A E     V    +  Y    G  ++R+
Sbjct: 26  AGLEALLRGEPLPGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRE 85

Query: 76  ALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS-----Y 127
            L  +L             +++T G   A    V      GD V +  P YF +     +
Sbjct: 86  LLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEF 145

Query: 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
              +M  V    +       L  D D LE+    K   ++    NP NP+G       + 
Sbjct: 146 FEGEMVPVQLDYLSADKRAGL--DLDQLEEAF--KAGVRVFLFSNPNNPAGVVYSAEEIA 201

Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRVG 242
           +I+ L +  G+ ++VD  Y   +YDG  +       ++ ++V+ +   SK   + G+R+G
Sbjct: 202 QIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLG 261

Query: 243 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302
            +A+ S       ++ K+Q  + + A+  SQ +          W+ +R+      R+ + 
Sbjct: 262 -VAFGS--PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLL 318

Query: 303 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
             L  +    V+  +   YL+ RLP   +   + V+ L  + GV+V PG
Sbjct: 319 RVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPG 367

Length = 405

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 65.7 bits (160), Expect = 1e-11
 Identities = 88/356 (24%), Positives = 145/356 (40%), Gaps = 53/356 (14%)

Query: 69  GLPELRDALVKKLNQ----ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY- 123
           GL   R A+   + Q    + +     +++TAGA  A   +   L D GD++++  PYY 
Sbjct: 96  GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYP 155

Query: 124 -FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL----VSVVNPGNPSG 178
            F+  + ++ TGV  + +   SS         LE   +      +    V + NP NP G
Sbjct: 156 GFDRDLRWR-TGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLG 214

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTY-----------------EYFMYDGRKHCCVEG 221
             +   +L+ I D        LV D  Y                 E   Y G      E 
Sbjct: 215 ATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVA----ER 270

Query: 222 DHVVNLFSFSKAYGMMGWRVGYI-AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280
            H+V  +S SK  G+ G+RVG I +Y  +V   A ++           S  +QHL L S+
Sbjct: 271 VHIV--YSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT-----LVSSQTQHL-LASM 322

Query: 281 QTGPEWVTERVKD----LVRNREIIREALSPLGEGAVKGGEGAIYLW---ARLPEKHLDD 333
            +  E+    ++     L +  E+I + L   G   +KG  G ++ W   + L E    +
Sbjct: 323 LSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAG-LFCWMNLSPLLETPTRE 381

Query: 334 FEVVRW--LAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEE 385
            E+  W  +     + + PG +C C   G  R+ F  + ED  + A  R+ R ++ 
Sbjct: 382 GELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437

Length = 447

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 48/311 (15%)

Query: 71  PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
           PE R  L   L +++ L   +++V  GA++    ++  + D GD ++   P +       
Sbjct: 86  PESR-RLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDA 144

Query: 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190
            + G   I V    +     D   + + +ET   PKL+ + +P NP G+ I +  L +I 
Sbjct: 145 AVNGAEVIKV--PRTPDFSLDVPRIVEAVET-HKPKLLFLTSPNNPDGSIISDDDLLKIL 201

Query: 191 DLCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
           +L       +V+D  Y E+   + R     + D+++ L +FSK  G+ G RVGY A+P  
Sbjct: 202 EL----PILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLS 257

Query: 250 VEGFATQLL---KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
           +     + L   K   N+ + A +     A  +L   P+++ +    LV  RE +   L 
Sbjct: 258 I----IEYLWRAKQPYNVSVAAEV----AACAALSN-PKYLEDVKNALVEERERLFGLLK 308

Query: 307 ------PLGEGA------VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 354
                 P    A      V  G  A  L   L +                GV+V    + 
Sbjct: 309 EVPFLEPYPSDANFILCRVTSGRDAKKLKEDLAK---------------MGVMVRHYNSK 353

Query: 355 GCRGHLRISFG 365
             +G++R+S G
Sbjct: 354 ELKGYIRVSVG 364

Length = 380

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 39/274 (14%)

Query: 42  WQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA-GAN 99
             P PK      KEL     I +Y  +   PELR+AL K       +   +++V   G +
Sbjct: 46  LGPSPKAVEAIEKEL---SKIHRY-PEPDAPELREALSKYTG----VPVENIIVGGDGMD 97

Query: 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP--DADW--- 154
           +    ++ T  D GD V++  P       +F       I      +K ++   + D+   
Sbjct: 98  EVIDTLMRTFIDPGDEVIIPTP-------TFSYYE---ISAKAHGAKPVYAKREEDFSLD 147

Query: 155 LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFMY 211
           ++  L   T+ T K++ +  P NP+G  IPE  +++I +   A    + VD  Y E+  Y
Sbjct: 148 VDSVLNAITEKT-KVIFLCTPNNPTGNLIPEEDIRKILESTDAL---VFVDEAYVEFAEY 203

Query: 212 DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASII 271
           D      +E D+++   +FSK +G+ G R+GY   P  +  +    ++ +   P   + +
Sbjct: 204 DYT-PLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDY---YMRAKT--PFSLTRL 257

Query: 272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
           SQ  A+ +L    E++ + ++  +++RE +   L
Sbjct: 258 SQAAAIAALSD-KEYIEKSIEHGIKSREYLYNEL 290

Length = 361

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 63.2 bits (154), Expect = 4e-11
 Identities = 81/333 (24%), Positives = 140/333 (42%), Gaps = 53/333 (15%)

Query: 69  GLPELRDALV---KKLNQENKLYKSSVMVTAGANQ--AFVNIVLTLCDAGDSVVMFAPYY 123
           G PELR+A+V   ++      L  ++V+   G  +  A++  +L L   GD+VV+    Y
Sbjct: 57  GTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL-GPGDTVVIPELAY 115

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
               +   + G T +         L P              P L+ + +PGNP+G  +  
Sbjct: 116 PTYEVGALLAGATPVAAD--DPTELDPV------------GPDLIWLNSPGNPTGRVLSV 161

Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE-----GDH--VVNLFSFSKAYGM 236
             L+ I    +  G+ +  D  Y    ++GR    ++     GDH  ++ + S SK   +
Sbjct: 162 DELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNL 221

Query: 237 MGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPEWVTER 290
            G+R G++A    +     +LL V+ +       P+ A++++   AL         V E+
Sbjct: 222 AGYRAGFVAGDPALVA---ELLTVRKHAGLMVPAPVQAAMVA---AL----GDDGHVAEQ 271

Query: 291 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350
                  R  ++ AL   G   +   E  +YLWA   E   D ++ V  LA   G++V P
Sbjct: 272 KARYAARRAQLKPALEKAG-FRIDHSEAGLYLWATRGE---DAWDTVDRLAE-LGILVAP 326

Query: 351 G---GACGCRGHLRISFGGLVEDDCKAAADRLR 380
           G   G  G   H+R++     ++   AA  RL 
Sbjct: 327 GDFYGPAG-SQHVRVALTA-TDERIAAAVARLT 357

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score = 63.3 bits (154), Expect = 6e-11
 Identities = 70/342 (20%), Positives = 136/342 (39%), Gaps = 27/342 (7%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDAL--------VKKLNQENKLYKSSVMVT 95
            P +  + + E V     + Y    G PE R+A+        V K + ++ + K +V++ 
Sbjct: 51  TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110

Query: 96  AGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDAD 153
           +G + A +  +  LCD GD++++ AP +  + +        +      P   K    D D
Sbjct: 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRP--EKDWEADLD 168

Query: 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
            + + ++ +   K + + NP NP G+    + ++ I  LC+     L+ D  Y   +++G
Sbjct: 169 EIRRLVDDR--TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG 226

Query: 214 RKHCCV-EGDHVVNLF---SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP--IC 267
                V + D  V        +K   + GWR+G++    +  G     L     +   +C
Sbjct: 227 ATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL-VDPHGNGGDFLDGMKRLGMLVC 285

Query: 268 A--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
              S++   L    L T  E + + V  L     ++   +      +     G+++L +R
Sbjct: 286 GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSR 345

Query: 326 LPEKHLDDF----EVVRWLAHRHGVVVIPGGACGCRGHLRIS 363
           L  +   D     E    L     V V+PG      G  R++
Sbjct: 346 LDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLT 387

Length = 412

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 31/299 (10%)

Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD 151
           V +  G + A   +   + D GD+V++  P +  +Y  + M+   H   G      +   
Sbjct: 85  VWLANGGDGALDYLARAMLDPGDTVLVPDPGF--AY--YGMSARYH--HGEVREYPVSKA 138

Query: 152 ADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-E 207
            D+    +  L+     ++V + +P NP+G+ IP   ++ +++      + +VVD  Y E
Sbjct: 139 DDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERT-DEETLVVVDEAYGE 197

Query: 208 YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267
           +           E D V  L +FSKAYG+ G R+GY   P   E +A    +V  N P  
Sbjct: 198 FAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP---EEWADAYARV--NTPFA 252

Query: 268 ASIISQHLALYSLQTGPEWVTERVKDLVR-NREIIREALSPLGEGAVKGGEGAIYLWARL 326
           AS ++    L +L    +   ER  +  R  RE IRE L    +       G   L    
Sbjct: 253 ASELACRAGLAAL--DDDEHVERTVETARWAREYIREEL----DAPTWESAGNFVLAE-- 304

Query: 327 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385
               + D   V   A   GV+V    + G    +RI+ G    ++ + A + L   L +
Sbjct: 305 ----VGDASAVAEAAQERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLAD 357

Length = 357

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 32/304 (10%)

Query: 76  ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTG 134
            L+   +    +    ++ + GA++A   ++   C+ G DS+  F P Y    +S +   
Sbjct: 64  ELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFN 123

Query: 135 VTHILVGPCSSKTLHPDADWLEKT--LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
           V          K L   AD+      +E     KLV + NP NP+GT I    ++++ ++
Sbjct: 124 V--------GVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEM 175

Query: 193 CKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEV 250
              A   +VVD  Y E+              ++V L + SKA+ + G R G+ +A    +
Sbjct: 176 TPDA--IVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI 233

Query: 251 EGFATQLLKVQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307
           E     L++V    P+    + I +Q L+    + G   +  +V DL      ++ ALS 
Sbjct: 234 E----ILMRVIAPYPVPLPVSEIATQALS----EAGLARMKFQVLDLNAQGARLQAALSM 285

Query: 308 LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGL 367
            G   V  G G  Y+ A+      DD + V       G+V            +R SF   
Sbjct: 286 YGGAKVLEGNGN-YVLAK-----FDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFSNR 339

Query: 368 VEDD 371
            E D
Sbjct: 340 AETD 343

Length = 354

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 61.4 bits (150), Expect = 2e-10
 Identities = 64/352 (18%), Positives = 122/352 (34%), Gaps = 72/352 (20%)

Query: 41  YWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQEN--KLYKSSVMV 94
           Y++      + + +L+    +++    Y   +G  EL +AL   LN+     +   ++ +
Sbjct: 49  YFR------DLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL 102

Query: 95  TAGANQAFVNIVLTLC-DAGDSV---VMF--APYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           T G+  AF  +         D     ++F  AP Y          G     +      + 
Sbjct: 103 TNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEY---------IGYADAGLEEDLFVSY 153

Query: 149 HPDADWLE----------KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
            P+ + L           + L        + V  P NP+G  + +  L+++  L +    
Sbjct: 154 RPNIELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNI 213

Query: 199 WLVVDNTY------------EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 246
            L++DN Y                      C           S SK  G+ G R G +  
Sbjct: 214 PLLIDNAYGPPFPGIIFSEATPLWNPNIILC----------MSLSKL-GLPGVRCGIVIA 262

Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR-----E 299
             E+      L  +   I +    +   +A   +++G         ++   R +      
Sbjct: 263 DEEI---IEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIA 319

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
           ++R  L       +   EGAI+LW    +  +   E+ + L  R GV+V+PG
Sbjct: 320 LLRRYLPDE-PCLIHKPEGAIFLWLWFKDLPITTEELYQRLKAR-GVLVVPG 369

Length = 416

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 45/241 (18%)

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----- 217
             P L+ + +P NP+G  +    L+++    +  G+ +  D  Y    +D          
Sbjct: 147 QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPR 206

Query: 218 -CVEGDH--VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------PICA 268
            C  GDH  ++ + S SK   + G+R G++A    +     +LL+V+ +       P+ A
Sbjct: 207 VC-GGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVA---ELLEVRKHAGMMVPAPVQA 262

Query: 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA---VKGGEGAIYLWAR 325
           ++++   AL         V E+ ++    R   R  L P  E A   V   E  +YLWA 
Sbjct: 263 AMVA---ALGDD----AHVREQ-RERYARR---RAVLRPALEAAGFRVDHSEAGLYLWAT 311

Query: 326 LPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDDCK--AAADRLR 380
             E   D ++ V WLA R G++V PG   G  G + H+R++   L   D +  AA +RL 
Sbjct: 312 RGE---DCWDTVAWLAER-GILVAPGDFYGPAGAQ-HVRVA---LTATDERIAAAVERLA 363

Query: 381 R 381
            
Sbjct: 364 A 364

Length = 364

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 60.7 bits (147), Expect = 4e-10
 Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 20/333 (6%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDS 115
           P +S+Y +  G   LR+A+     +   +     + V+ +AG+ +A  +  L   D  + 
Sbjct: 27  PEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEED 86

Query: 116 ---VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172
              V+   P Y          G     V            + +EK++  +   K+V +  
Sbjct: 87  RRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEET--KIVWINY 144

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSF 230
           P NP+G   P   LK    +C+  G  L  D  Y    +    H  +E   ++V+   S 
Sbjct: 145 PHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSL 204

Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER 290
           SK  GM G+R G++A   ++  F   L K++ N  + +    Q  A  +       V ER
Sbjct: 205 SKRSGMTGYRSGFVAGDEKLISF---LRKLRANFGVASPDFVQAAAKAAWSD-DNHVLER 260

Query: 291 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350
            K   R R++  E  + +G   +   +   YLW ++P         +R L   +G+VV P
Sbjct: 261 RKIFKRKRDLFIEFFNKVGLEYLY-PDATFYLWVKVPSGIDAKDYALRLL--ENGIVVAP 317

Query: 351 GGA--CGCRGHLRISFGGLVEDDCKAAADRLRR 381
           G     G  G++R++    +E +C+ A     R
Sbjct: 318 GENFGSGEEGYVRVALVPTLE-ECEEALRLWER 349

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score = 60.1 bits (145), Expect = 8e-10
 Identities = 81/368 (22%), Positives = 154/368 (41%), Gaps = 41/368 (11%)

Query: 62  SKYGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           + YG   G+   R A+   +N++  +KL    + +TAG NQ    +  +L     ++++ 
Sbjct: 102 NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLP 161

Query: 120 APYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADW---LE--KTLETKPTPKLVSVVN 172
            P +  +++  ++    V            L P+ +W   LE  + +  + T  +V V+N
Sbjct: 162 RPGFPHYDARAAYSGLEVRKF--------DLLPEKEWEIDLEGIEAIADENTVAMV-VIN 212

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-------FMYDGRKHCCVEGDHVV 225
           P NP G       LK++++  +  G  ++ D  Y+        F+  G+    V    V+
Sbjct: 213 PNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVP---VL 269

Query: 226 NLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLLKVQDNI---PICASIISQHLALYSL 280
            L   SK + + GW++G+IA   P  V      L  ++ N+   P  A+II   L     
Sbjct: 270 TLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILE 329

Query: 281 QTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHL----DDFE 335
           +    +  ++ K L  N +++ + L  +      K  E   YL  +L    +    DD +
Sbjct: 330 KADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDID 389

Query: 336 VVRWLAHRHGVVVIPGGACGCRGHLRISFG---GLVEDDCKAAADRLRRGLEELVKDGMV 392
               LA    +V +PG A G +  +RI+ G    ++ED  +       R  ++   +   
Sbjct: 390 FCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKKTETETNS 449

Query: 393 QEHVLLID 400
            + + L D
Sbjct: 450 LQALKLSD 457

Length = 462

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 58.2 bits (140), Expect = 3e-09
 Identities = 89/332 (26%), Positives = 135/332 (40%), Gaps = 63/332 (18%)

Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSS---- 145
           V+++ GA  A   I+  L D GD  ++ +PYY  F+  + ++ TGV  I V PCSS    
Sbjct: 122 VVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWR-TGVEIIPV-PCSSSDNF 179

Query: 146 KTLHPDADW-LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204
           K     ADW  +K  E+    K + + NP NP GT + +  L  +          LVVD 
Sbjct: 180 KLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDE 239

Query: 205 TYEYFMYDGRKHCCVEGDHVVN--------------LFSFSKAYGMMGWRVGYIAYPSEV 250
            Y   ++ G     V    VVN              ++S SK  G+ G+RVG I Y    
Sbjct: 240 IYAATVFAGGDFVSVA--EVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVG-IVY---- 292

Query: 251 EGFATQLLKVQDNIPICASIISQ--------HLALYSLQTGPEWVTERVKDLVRNREIIR 302
                      D++  CA  +S          L L S+ +  ++V   + +  R R  IR
Sbjct: 293 --------SFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSR-RLGIR 343

Query: 303 EALSPLG----EGAVKGGEGAIYLWARLPEKHL----DDFEVVRWLAH----RHGVVVIP 350
             +   G    + A       ++ W  L  +HL    + FE    L H    +  + V P
Sbjct: 344 HKVFTTGIKKADIACLTSNAGLFAWMDL--RHLLRDRNSFESEIELWHIIIDKVKLNVSP 401

Query: 351 GGACGCR--GHLRISFGGLVEDDCKAAADRLR 380
           G +  C   G  RI F  + +D    A  R++
Sbjct: 402 GSSFRCTEPGWFRICFANMDDDTLHVALGRIQ 433

Length = 496

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 57.4 bits (139), Expect = 4e-09
 Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 45/324 (13%)

Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           E++K +      ++Y        LR+A+ +       L   ++ V  G+++  ++ ++ L
Sbjct: 42  EELKRV----PFNRY-PHITSDPLREAIAEFYG----LDAENIAVGNGSDE-LISYLVKL 91

Query: 110 CDAGDSVVMFAPYYFNSYMSF--QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167
            + G  +V+  P  F  Y SF  ++ G+  I V      T+  +        E       
Sbjct: 92  FE-GKHIVITPPT-FGMY-SFYAKLNGIPVIDVPLKEDFTIDGERI-----AEKAKNASA 143

Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227
           V + +P NP+G   PE  + ++ +     G  +V+D  Y  F          E  +++ L
Sbjct: 144 VFICSPNNPTGNLQPEEEILKVLE----TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILL 199

Query: 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWV 287
            +FSKA+G+ G R GY     E+      L +++   P   +I++  +   +L    + +
Sbjct: 200 RTFSKAFGLAGIRAGYAIANEEI---IDALYRIKP--PFSLNILTMKIVRLALDH-YDLI 253

Query: 288 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347
            ER+  +++ RE +R     LGE A       + L     +  L++  VVR L+ R    
Sbjct: 254 EERIDYIIKERERVRRE---LGEYAYPSDANFLLLKLDAYDYLLENGIVVRKLSGR---- 306

Query: 348 VIPGGACGCRGHLRISFGGLVEDD 371
                     GH+R++ G   E+D
Sbjct: 307 --------LEGHIRVTVGKREEND 322

Length = 337

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 74/280 (26%), Positives = 116/280 (41%), Gaps = 31/280 (11%)

Query: 104 NIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCSSKTLHPDADWLEK 157
           +++  +C A    GD VV   P +        M G  V  + V P     L  D D L  
Sbjct: 99  DLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP----DLGFDLDALCA 154

Query: 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKH 216
            +   P  +++   NP NP G+++    L R+ D      + +VVD  Y EY   D    
Sbjct: 155 AVARAP--RMLMFSNPSNPVGSWLTADQLARVLDATPPE-TLIVVDEAYAEYAAGDDYPS 211

Query: 217 C----CVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASII 271
                   G   + L +FSKAYG+ G RVGY +    E+ G      +V+   P   +  
Sbjct: 212 ALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLD---RVRT--PFNVNGA 266

Query: 272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL 331
           +Q  AL +L    E + + V   +  RE +++ L+ +G          ++  AR P   +
Sbjct: 267 AQAAALAALDD-EEHLAKGVALALAERERLKKELAEMGYRIAPSRANFLFFDARRPASAV 325

Query: 332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD 371
            +      L  R GV+V P    G    +R+S G   E+D
Sbjct: 326 AE----ALL--RQGVIVKPWKQPGFETFIRVSIGSPEEND 359

Length = 371

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 38/169 (22%), Positives = 56/169 (33%), Gaps = 11/169 (6%)

Query: 72  ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
           EL + L + L   N       +       A    +L L   GD V++ A  + + Y    
Sbjct: 4   ELEEKLARLLQPGNDK----AVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAA 59

Query: 132 -MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190
            + G   + V P            + + L+ KP   L+ +       G  +P   LK I 
Sbjct: 60  ELAGAKPVPV-PVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIR 115

Query: 191 DLCKAAGSWLVVDNTYE-YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238
            + K  G  L+VD                  G  VV  FS  K  G  G
Sbjct: 116 KIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT-FSLHKNLGGEG 163

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 22/177 (12%)

Query: 78  VKKLNQE-NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT 136
            + L +E +KL+   +++TAG  +A   I +      D  V+   + +  Y       V 
Sbjct: 42  YEWLEEEFSKLFGEPIVITAGITEALYLIGILALR--DRKVIIPRHTYGEYER-----VA 94

Query: 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV---NPGNPSGTYIPERLLKRISDLC 193
                        P+   LE+ +E        SVV   NP NP G +   + LK + D  
Sbjct: 95  RFFAARIIKGPNDPEK--LEELVERN------SVVFFCNPNNPDGKFYNFKELKPLLDAV 146

Query: 194 KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
           +   + L++D  +  F+         EG++++ L +F+K+YG+ G RVGY+    E 
Sbjct: 147 EDRNALLILDEAFIDFVKKPES---PEGENIIKLRTFTKSYGLPGIRVGYVKGFEEA 200

Length = 311

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 69/257 (26%), Positives = 109/257 (42%), Gaps = 28/257 (10%)

Query: 148 LHPDADWL----EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
           L P+ DWL        E     K++    P NP+    P    + I    +     LV D
Sbjct: 150 LKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHD 209

Query: 204 NTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV-EGFATQL 257
             Y    +DG +   +       D  V   + SK Y M GWRVG++     + +G  T  
Sbjct: 210 LCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRT-- 267

Query: 258 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN-REIIREALSPLGEGAVKGG 316
           LK   +  I +++  Q  A  +LQ  P+   ++V++  R  R+ + + L  LG   +   
Sbjct: 268 LKTNLDYGIFSAL--QKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGELG-WNIPPT 323

Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKA 374
           +  +YLW   P   +   +    +  + GVVV PG A G    G++RIS   L+ D    
Sbjct: 324 KATMYLWVPCP-VGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRIS---LIAD---- 375

Query: 375 AADRLRRGLEELVKDGM 391
             DRL   L+ L + G+
Sbjct: 376 -CDRLGEALDRLKQAGI 391

Length = 394

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 54.2 bits (131), Expect = 5e-08
 Identities = 80/355 (22%), Positives = 140/355 (39%), Gaps = 33/355 (9%)

Query: 43  QP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY------KSSVMVT 95
           QP P+  +E ++E   +P+  KY    G P L++A      +E   Y      ++ V + 
Sbjct: 44  QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKRE---YGVTLDPETEVAIL 100

Query: 96  AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL 155
            G     V +   L + GD++++  P Y +      +       +   +     PD   +
Sbjct: 101 FGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKI 160

Query: 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK 215
            +  E     KL+ +  P NP+G    +   +      K     +V D  Y    +DG+K
Sbjct: 161 PE--EVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218

Query: 216 HCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASI 270
                   G  D  + L++ SK + M GWRV +      V   A  LL  QD++ +  S+
Sbjct: 219 PVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIE-AINLL--QDHLFV--SL 273

Query: 271 IS--QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328
               Q  A+ +L +    V E V      R     A   +G        G+ + W  +P+
Sbjct: 274 FGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGWEVDAPK-GSFFAWMPVPK 332

Query: 329 KHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLV--EDDCKAAADRL 379
            +    +    L  +  V V PG   G    G++R+   GL+  E+  + A +R+
Sbjct: 333 GY-TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRV---GLLTDEERLREAVERI 383

Length = 389

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 53.9 bits (130), Expect = 6e-08
 Identities = 82/354 (23%), Positives = 137/354 (38%), Gaps = 52/354 (14%)

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLY-----KSSVMVTAGANQAFVNIVLTLCDAGDS 115
           +S Y   +GLPELR A+ + L +   L      +  V+   G  +A       + + G +
Sbjct: 57  LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQA 116

Query: 116 --VVMFAPYYFNSYMSFQMTGVTHILVG------PC-SSKTLHPDADWLEKTLETKPTPK 166
             VVM  P+Y       Q+     +L G       C +     PD D + +++  +   +
Sbjct: 117 PLVVMPNPFY-------QIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRC--Q 167

Query: 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD------GRKHCCVE 220
           L+ V +PGNP+G  +    LK++ +L    G  +  D  Y    +D      G      +
Sbjct: 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQ 227

Query: 221 -GDH----VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 275
            G       +   S SK   + G R G++A  +E+     +          CA  I   L
Sbjct: 228 LGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHG----CAMPIPTQL 283

Query: 276 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 335
           A  +     + V E           + E L  + +  ++  +   YLW ++P    DD  
Sbjct: 284 ASIAAWNDEQHVRENRALYREKFAAVLEILGQVLD--LELPDAGFYLWPKVP---GDDEA 338

Query: 336 VVRWLAHRHGVVVIPG--------GACGCRGHLRISFGGLVEDDCKAAADRLRR 381
             R L     V V+PG        G     G +RI+    +E +C  AA+R+R 
Sbjct: 339 FARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLE-ECVEAAERIRS 391

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 42/259 (16%)

Query: 149 HPDADWLEKTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
           +PD D     + +K T   K + ++NP NP+G   P  +L++I D+ +     +  D  Y
Sbjct: 268 YPDID----DIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIY 323

Query: 207 EYFMYDGRKH---CCVEGDHVVNLFS-FSKAYGMMGWRVGYIAYPSE-------VEGFAT 255
           +  + DG +H     +  D     FS  SK++ + G+R+G++            +EG   
Sbjct: 324 DRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEG--- 380

Query: 256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV-------RNREIIREALSPL 308
             L +  N+ +C+++ +Q +    +QT      + VKD +         RE++  AL+ +
Sbjct: 381 --LNMLANMRLCSNVPAQSI----VQTA-LGGHQSVKDYLVPGGRVYEQRELVYNALNAI 433

Query: 309 -GEGAVKGGEGAIYLWARLPEKHL---DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRI 362
            G  AVK  + A Y++ ++  K     DD +    L H   V+++ G         H R+
Sbjct: 434 PGISAVK-PKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRV 492

Query: 363 SFGGLVEDDCKAAADRLRR 381
            +   +E D + A DRL  
Sbjct: 493 VYLPRLE-DLEDAMDRLAD 510

Length = 517

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 52.0 bits (124), Expect = 2e-07
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 36/230 (15%)

Query: 43  QP--PKMAMEKVKELVWDPSISKYGADEG----LPELRDALVKKLNQENKLYK---SSVM 93
           QP  P  + E++KE+  D S  K  ++E      P + D L K    ++ LY    ++ +
Sbjct: 11  QPYKPGKSPEQMKEVYGDHSFVKLASNENPFGCSPRVLDELQKSW-LDHALYPDGGATTL 69

Query: 94  VTAGANQAFVNIVLTLCDAG-DSVV-MFAPYYFNSYMSFQMTGVT------HILVGPCSS 145
               AN+  V +   LC +G D V+ + +     +  +    G T      H ++  C  
Sbjct: 70  RQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEV 129

Query: 146 KTLHPDA---DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
           K +  +    D  E +       K+V + NP NP+GTY+ +R L +  +   +  + +V+
Sbjct: 130 KEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGI-SENTLIVI 188

Query: 203 DNT-YEYFMYDG--------RKHCCVEGDHVVNLFSFSKAYGMMGWRVGY 243
           D   YEY              KH      +++ L +FSKAYG+  +RVGY
Sbjct: 189 DEAYYEYVTAKDFPETLPLLEKH-----KNILVLRTFSKAYGLASFRVGY 233

Length = 366

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 71/343 (20%), Positives = 128/343 (37%), Gaps = 50/343 (14%)

Query: 71  PELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM 128
             L  A++  L Q +  ++    ++   G   +    V  L   G+ V++  P Y     
Sbjct: 63  DSLYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQTPVYPPFLS 122

Query: 129 SFQMTGVTHILVGPCSSKTLHPDA-----DWLEKTLETKPTP--KLVSVVNPGNPSGTYI 181
           + +  G   +L        L  D      D   + LE   T   +L+ + +P NP G   
Sbjct: 123 AVKSNGRELVLN------PLKLDPGRYRFDL--EDLEDAITEKARLLLLCSPHNPVGRVW 174

Query: 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE------GDHVVNLFSFSKAYG 235
               L R+++LC      +V D  +   +Y   KH  +        +  V L S  K + 
Sbjct: 175 TREELTRLAELCLRHNVVVVSDEIHADLVYPPNKHIPLASLSPEIAERTVTLLSPGKTFN 234

Query: 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL-------QTGPEWVT 288
           + G  + +   P+          +    + I      QH  L+         + G  W+ 
Sbjct: 235 IAGLNISFAIIPN--PELRRAFQEAAQRVHI------QHGNLFGYVAFEAAYREGEPWLD 286

Query: 289 ERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347
             +  L  NR+++ E ++  L +  V+  E     W       LDD ++  +   + G+ 
Sbjct: 287 ALLAYLRGNRDLVEEFIAKRLPQIRVRPPEATYLAWLDCRALGLDDADLRAFFIEQAGLG 346

Query: 348 VIPG---GACGCRGHLRISFG---GLVEDDCKAAADRLRRGLE 384
           + PG   G  G  G +R++FG     +E     A +RLR+ L 
Sbjct: 347 LNPGISFGDGG-SGFMRLNFGCPRSTLEQ----ALERLRQALA 384

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208
           +PD D LE  ++  P+   + ++NP NP+G   P+ +L+ I D+ +    +++ D  Y  
Sbjct: 156 YPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNN 215

Query: 209 FMYDGRKHCC---VEGDHV--VNLFSFSKAYGMMGWRVGYIAY 246
            +Y+G+K      V GD V  + L   SK     G R G+I  
Sbjct: 216 IVYNGKKTVPLSEVIGD-VPGIALKGISKELPWPGSRCGWIEV 257

Length = 433

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score = 51.1 bits (123), Expect = 5e-07
 Identities = 93/360 (25%), Positives = 149/360 (41%), Gaps = 74/360 (20%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIV-LTLCDAGDSVVMFA 120
           Y    G P +R A+   + + + + K  S + +T GA+     ++ L + D  D V++  
Sbjct: 111 YTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPI 170

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNP 176
           P Y     +  + G   +       K    D + LE+  E       TP+ + V+NPGNP
Sbjct: 171 PQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG-------RKHCC---VEGDHVVN 226
           +G  +   +++ I   C   G  L+ D  Y+  +YDG       RK       E +  V 
Sbjct: 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVE 290

Query: 227 LFSF---SKA-YGMMGWRVGY---IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYS 279
           L SF   SK   G  G R GY      P EV     Q+ K+  +I +C++++ Q      
Sbjct: 291 LVSFHSTSKGIIGECGRRGGYFELTNIPPEVR---EQIYKLA-SINLCSNVVGQ------ 340

Query: 280 LQTG-------------PEWVTER---VKDLVRNREIIREALSPLGEGAVKG-----GEG 318
           L TG             P +  ER      L R  E++ + L+      ++G      EG
Sbjct: 341 LMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELN-----KIEGVSCQPVEG 395

Query: 319 AIYLWAR--LPEKHLDDFEV------VRW---LAHRHGVVVIPGGACGCRG---HLRISF 364
           A+Y + R  LPEK + + +       V +   L    G+VV+PG   G +    H RI+ 
Sbjct: 396 AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITI 455

Length = 481

>gnl|CDD|173269 PRK14808, PRK14808, histidinol-phosphate aminotransferase; Provisional

 Score = 50.8 bits (121), Expect = 5e-07
 Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 23/223 (10%)

Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    ++L      D  V F P Y + Y  F        L  P +  
Sbjct: 74  LSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128

Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E          +V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 129 LRIPEVNVGEG--------DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAY 176

Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
             F  +       + +++  + +FSKA+ +   R+GY+      E F     +V+  +P 
Sbjct: 177 YEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVV---SSEKFIDAYNRVR--LPF 231

Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
             S +SQ  A  +L    E   ER K +V  RE ++ AL  +G
Sbjct: 232 NVSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMG 273

Length = 335

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 50.8 bits (122), Expect = 5e-07
 Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 42/241 (17%)

Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           E + +LV  P            ELR    K++    +L   +V++  GA +   NIV   
Sbjct: 43  ENLDKLVEYPDPDYL-------ELR----KRIASFEQLDLENVILGNGATELIFNIVKVT 91

Query: 110 CDAGDSVVM---FAPY-----YFNSYMS-FQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
                 +++   FA Y      F++ +   ++T  T+             +   LE+  E
Sbjct: 92  -KPKKVLILAPTFAEYERALKAFDAEIEYAELTEETN----------FAANEIVLEEIKE 140

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV- 219
                 LV + NP NP+G  I +  +K+I D C+    +L++D  +  F+ +      + 
Sbjct: 141 EI---DLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMIN 197

Query: 220 EGDHVVNLF---SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--NIPICASIISQH 274
             ++  NL    +F+K + + G R+GY    +  +  A +LL++++  +I   A +  Q 
Sbjct: 198 YLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN--KNLAEKLLQMREPWSINTFADLAGQT 255

Query: 275 L 275
           L
Sbjct: 256 L 256

Length = 354

>gnl|CDD|181255 PRK08153, PRK08153, histidinol-phosphate aminotransferase; Provisional

 Score = 50.8 bits (122), Expect = 6e-07
 Identities = 76/263 (28%), Positives = 113/263 (42%), Gaps = 40/263 (15%)

Query: 61  ISKYGADEGLPELRDALVKKLN--QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
           I KYG  E   +LR AL        EN      +MV  G +     IV    + GD VV 
Sbjct: 61  IWKYGDPENH-DLRHALAAHHGVAPEN------IMVGEGIDGLLGLIVRLYVEPGDPVVT 113

Query: 119 FAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPG 174
               Y  FN    + + G    LV    +     D + L+  L+   +    LV + NP 
Sbjct: 114 SLGAYPTFN----YHVAGFGGRLV----TVPYRDDREDLDALLDAARRENAPLVYLANPD 165

Query: 175 NPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH--VVNLFSFS 231
           NP G++ P   ++  I  L     + LV+D  Y      G     ++ D   V+ + +FS
Sbjct: 166 NPMGSWHPAADIVAFIEAL--PETTLLVLDEAYCETAPAG-AAPPIDTDDPNVIRMRTFS 222

Query: 232 KAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL--QTGPEWVT 288
           KAYG+ G RVGY I  P  ++ F     KV+++  +  + I+Q  AL +L  Q     V 
Sbjct: 223 KAYGLAGARVGYAIGAPGTIKAFD----KVRNHFGM--NRIAQAAALAALKDQAYLAEVV 276

Query: 289 ERVKDLVRNR--EIIRE-ALSPL 308
            ++    R+R   I R   L+PL
Sbjct: 277 GKI-AAARDRIAAIARANGLTPL 298

Length = 369

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 50.7 bits (122), Expect = 6e-07
 Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)

Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHP 150
           V+V+ GA++    ++   C+ G   +++ P  +  Y +S +  GV          +T+  
Sbjct: 77  VLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGV--------EIRTVPT 128

Query: 151 DADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTY 206
             +W   L    +     K+V V +P NP+G  I  + L+ +  L    G  +VV D  Y
Sbjct: 129 LDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTL--LELTRGKAIVVADEAY 186

Query: 207 EYFMYDGRKHCCVEGD---------HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257
             F        C +           H+V L + SKA+ + G R G+     EV      L
Sbjct: 187 IEF--------CPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINL---L 235

Query: 258 LKVQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
           LKV    P+    A I +Q L+   +      + ERV ++  NR+ +  AL
Sbjct: 236 LKVIAPYPLSTPVADIAAQALSPQGIAA----MRERVAEINANRQWLIAAL 282

Length = 351

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 16/110 (14%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLE 156
           A   ++L L  AGD VV     Y  +Y  F+      G+    V P        D + LE
Sbjct: 67  AISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP-------DDPEALE 119

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
             +  KP  KLV V +P NP+   +    ++ I++L    G+ LVVDNT+
Sbjct: 120 AAI--KPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTF 164

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 64/232 (27%), Positives = 95/232 (40%), Gaps = 47/232 (20%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP----Y 122
           D   PELR  + K L  +    +  ++  AG ++    I   L + G + VM  P    Y
Sbjct: 63  DGYAPELRTKVAKHLGVD----EEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQY 118

Query: 123 YFNS-YMSFQMTGVTHILVGPCSSKTLHPDA-----DWLEKTLETKPTPKLVSVVNPGNP 176
             N+     ++  V      P        +A     D  E+T       K+V + NP NP
Sbjct: 119 RHNAIIEGAEVREV------PLKDGGHDLEAMLKAID--EQT-------KIVWICNPNNP 163

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVV-DNTY-EYFMYDGRKHCCVEGDHVVNLF---SFS 231
           +GTY+    L  +S L       LVV D  Y EY   +         +   NL    +FS
Sbjct: 164 TGTYVNHEEL--LSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFS 221

Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---PICASIISQHLALYSL 280
           KAYG+   RVGY        G A++ L  + NI   P   + I+Q+ A+ +L
Sbjct: 222 KAYGLAALRVGY--------GIASEELIEKLNIARPPFNTTRIAQYAAIAAL 265

Length = 359

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 62/253 (24%), Positives = 98/253 (38%), Gaps = 37/253 (14%)

Query: 71  PELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY 127
           P LR AL         LY      +++  G+++A   +V  LC  G   V+  P  F  Y
Sbjct: 62  PGLRSALAA-------LYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMY 114

Query: 128 -MSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP--- 182
            +  ++     + V         H D   +          KLV + +P NP+G+ I    
Sbjct: 115 AVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALAS-NAKLVFLCSPSNPAGSAIALDQ 173

Query: 183 -ERLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 240
            ER L+ +        + +VVD  Y E+             D++  L + SKA+ +   R
Sbjct: 174 IERALQALQG-----KALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAAR 228

Query: 241 VG-YIAYPSEVEGFATQLLKVQDNIPI---CASIISQHLALYSLQTGPEWVT-ERVKDLV 295
           +G  IA    +      L + Q   P+   CA      LA  +L      VT  RV ++ 
Sbjct: 229 IGSLIANAELI----AVLRRCQAPYPVPTPCA-----ALAEQALSAPALAVTARRVAEVR 279

Query: 296 RNREIIREALSPL 308
             RE +  AL+ L
Sbjct: 280 AERERLHAALAQL 292

Length = 364

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 48.0 bits (115), Expect = 5e-06
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLE 156
           A    +L L  AGD V++    Y  +Y       Q  GV    V P        D + LE
Sbjct: 90  AISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP-------GDDEALE 142

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
             +  +P  KLV +  P NP         +  I+ L KA G+ +VVDNT+
Sbjct: 143 AAI-KEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTF 188

Length = 396

>gnl|CDD|180188 PRK05664, PRK05664, threonine-phosphate decarboxylase; Reviewed

 Score = 47.7 bits (114), Expect = 5e-06
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 9/93 (9%)

Query: 170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHV--V 225
           VVNP NP+G    P RLL   + L  A G WLVVD   E FM +  +H           +
Sbjct: 130 VVNPNNPTGRRFDPARLLAWHARL-AARGGWLVVD---EAFMDNTPQHSLAACAHRPGLI 185

Query: 226 NLFSFSKAYGMMGWRVGYI-AYPSEVEGFATQL 257
            L SF K +G+ G R+G++ A P+ +   A  L
Sbjct: 186 VLRSFGKFFGLAGARLGFVLAEPALLRALAELL 218

Length = 330

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 43/162 (26%)

Query: 109 LCDAGDSVVM----FAPY----YFNSYMSFQMTGVTHILVGPCSSKTLH----PDADWLE 156
           L   GD + +    F PY        Y  F+   V  I     +    H    PD + LE
Sbjct: 180 LLKKGDKIALMTPIFTPYLEIPELPRY-DFE---VVRIKADEMTEDGTHTWQYPDKE-LE 234

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTYEYFMYDGR 214
           K  +  P+ K + VVNP NP    + +  +++I D+       L++  D+ Y  F+    
Sbjct: 235 KLRD--PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFV---- 288

Query: 215 KHCCVEGDHVVNLF-----------SFSKAYGMMGWRVGYIA 245
                  D   +LF           SFSK +G  GWR+G IA
Sbjct: 289 -------DDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIA 323

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|180947 PRK07366, PRK07366, succinyldiaminopimelate transaminase; Validated

 Score = 47.4 bits (113), Expect = 8e-06
 Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 45/233 (19%)

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG------------RKHCCVE 220
           P NP+    P    +     C+     LV D  Y   ++DG             K   +E
Sbjct: 174 PHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIE 233

Query: 221 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL----- 275
                  F+ SK+Y M G+R+G+    +++     Q+  V D         +Q+      
Sbjct: 234 ------FFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVD--------FNQYRGILNG 279

Query: 276 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDF 334
           A+ +L      V + V+   + R+    AL  +G   V   E  +Y+WA+LPE    +  
Sbjct: 280 AIAALTGPQATVQQTVQIFRQRRDAFINALHQIG-WPVPLPEATMYVWAKLPEPWQGNSV 338

Query: 335 EVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384
           E    L  + GV   PG   G  G  G++R +   LV D      D L   +E
Sbjct: 339 EFCTQLVAQTGVAASPGSGFGKSG-EGYVRFA---LVHD-----PDILEEAVE 382

Length = 388

>gnl|CDD|235115 PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional

 Score = 46.8 bits (112), Expect = 1e-05
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEG- 221
           P +V + +P NP+GT +P   ++ I     AA   +VVD  Y  F   G       +   
Sbjct: 161 PDVVFLTSPNNPTGTALPLDDVEAI---LDAAPGIVVVDEAYAEFRRSGTPSALTLLPEY 217

Query: 222 DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280
             +V   + SKA+   G R+GY  A P+ V+  A +L++    +P   S ++Q  A  +L
Sbjct: 218 PRLVVSRTMSKAFAFAGGRLGYLAAAPAVVD--ALRLVR----LPYHLSAVTQAAARAAL 271

Query: 281 QTGPEWVTERVKDLVRNREIIREALSPLG 309
           +   E +   V  L   R+ +   L  LG
Sbjct: 272 RHADE-LLASVAALRAERDRVVAWLRELG 299

Length = 368

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 72/332 (21%), Positives = 121/332 (36%), Gaps = 70/332 (21%)

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           +  Y   +G   L DAL K L +E            G N    NI LT    G     F 
Sbjct: 67  LCNYDGPQGKAVLIDALAKMLRRE-----------YGWNITAQNIALT---NGSQSAFF- 111

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTL-----------------------------HPD 151
            Y FN +   +  G    ++ P + + +                             H D
Sbjct: 112 -YLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVD 170

Query: 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY----- 206
            + L     T      + V  P NP+G  + +  L ++  L +  G  L++DN Y     
Sbjct: 171 FEHLHIGESTG----AICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP 226

Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
                D      +  ++++   S SK  G+ G R G I    +V      +  +   I +
Sbjct: 227 GIIFSDATP---LWNENIILCMSLSKL-GLPGSRCGIIIANEKV---IQAITNMNGIISL 279

Query: 267 CASIISQHLALYSLQTGP-EWVTERV-KDLVRNR-----EIIREALSPLGEGAVKGGEGA 319
               +   +A   +++G    ++E+V +   RNR      I+R  L       +   EGA
Sbjct: 280 APGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLIHKPEGA 338

Query: 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
           I+LW    +  +   E+ + L  R GV+++PG
Sbjct: 339 IFLWLWFKDLPITTEELYQRLKAR-GVLMVPG 369

Length = 417

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 27/109 (24%)

Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTYE 207
           PD++ LEK  +  P+ K + +VNP NP    + +  L++I+D+       L++  D+ Y 
Sbjct: 230 PDSE-LEKLRD--PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG 286

Query: 208 YFMYDGRKHCCVEGDHVVNLF-----------SFSKAYGMMGWRVGYIA 245
            F+           D   +LF           SFSK +G  GWR+G IA
Sbjct: 287 TFV-----------DDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIA 324

Length = 527

>gnl|CDD|235650 PRK05939, PRK05939, hypothetical protein; Provisional

 Score = 45.1 bits (107), Expect = 4e-05
 Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 17/109 (15%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYF---NS-YMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
           A   + LTL  AGD +V    + F   NS + + +  GV   +V          D   + 
Sbjct: 74  AIAAVFLTLLRAGDHLVSSQ-FLFGNTNSLFGTLRGLGVEVTMVDAT-------DVQNVA 125

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
             +  +P  ++V V    NP GT + +  L  I  LC+  G   VVDNT
Sbjct: 126 AAI--RPNTRMVFVETIANP-GTQVAD--LAGIGALCRERGLLYVVDNT 169

Length = 397

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 44.2 bits (105), Expect = 8e-05
 Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 48/278 (17%)

Query: 49  MEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVM----VTAGANQAFV 103
            + + +L   P  I  Y   +G+PELRD   +K+ +EN       M    VT       +
Sbjct: 26  QDLLNDL--TPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHG-L 82

Query: 104 NIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET- 161
           ++V  L  D GD+V++    + N  ++F       I+  P   +    D D L++ L+  
Sbjct: 83  SLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAA 142

Query: 162 KPTPKLVSVVN-PGNPSGTYIP-ERLLKRISDLCKA---AGSWLVV--DNTYEYFMYD-- 212
               K++ ++N P NP+G Y P E+    I +  K    AG+ +V   D+ Y    Y+  
Sbjct: 143 YNKGKVIVILNFPNNPTG-YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS 201

Query: 213 ------GR---KH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAY---PSEVEGFATQL 257
                       H     V+ D        +K   + G+RVG+I +       +     L
Sbjct: 202 YKESLFAALANLHSNILAVKLD------GATKEEFVWGFRVGFITFGTKAGSSQTVKEAL 255

Query: 258 LK-----VQDNIPICASIISQHLALYSLQTGPEWVTER 290
            K     ++ NI       SQ   L +L + PE+  E+
Sbjct: 256 EKKVKGLIRSNIS-NGPHPSQSAVLRALNS-PEFDKEK 291

Length = 388

>gnl|CDD|225428 COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 16/115 (13%)

Query: 95  TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHP 150
            A    A    +L L  AGD++V  +  Y  +Y  F  T    G+    V P        
Sbjct: 83  VASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-------D 135

Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
           D +  E  +      K V     GNP    + +  ++ I+++    G  L+VDNT
Sbjct: 136 DPENFEAAI--DENTKAVFAETIGNPGLD-VLD--IEAIAEIAHRHGVPLIVDNT 185

Length = 426

>gnl|CDD|216267 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 16/110 (14%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLE 156
           A    +L L  AGD VV     Y  +Y          G+    V P        D D LE
Sbjct: 79  AIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVTFVDP-------SDLDALE 131

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
             +  KP  K V +  P NP    + +  ++ I+ + K  G+ +VVDNT+
Sbjct: 132 AAI--KPNTKAVFLETPTNPL-LKVVD--IEAIAKIAKKHGALVVVDNTF 176

This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 382

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 44/216 (20%)

Query: 105 IVLTLCDAGDSV-------VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157
           + L     G +V       VM+        MS ++ G+  + V   +  TL  D   +  
Sbjct: 97  LALACAKPGATVLAPEPGFVMYR-------MSAKLAGLEFVGVPLTADFTL--DLPAMLA 147

Query: 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-----EYFMYD 212
            +     P LV +  P NP+G    +  ++RI    +AA   +VVD  Y     + ++  
Sbjct: 148 AIAEH-RPALVFLAYPNNPTGNLFDDADVERI---IEAAPGLVVVDEAYQPFAGDSWLPR 203

Query: 213 GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIIS 272
             +       +++ + + SK  G+ G R+GY+A          +L KV+   P   ++++
Sbjct: 204 LARF-----PNLLVMRTVSK-LGLAGLRLGYLAGHPAW---IAELDKVR--PPYNVNVLT 252

Query: 273 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308
           Q  AL++L        E V  L      +R   + L
Sbjct: 253 QATALFAL--------EHVDVLDAQAAQLRAERTRL 280

Length = 356

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
           TG    ++       L  DA  LEK +   P  KLV++ +  N +GT  P   +K I++L
Sbjct: 135 TGAKVRVIPLDDDGLLDLDA--LEKLI--TPKTKLVALSHVSNVTGTVNP---VKEIAEL 187

Query: 193 CKAAGSWLVVD 203
               G+ ++VD
Sbjct: 188 AHEHGALVLVD 198

Length = 405

>gnl|CDD|181244 PRK08133, PRK08133, O-succinylhomoserine sulfhydrylase; Validated

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 20/120 (16%)

Query: 93  MVTAGANQAFVNIVLTLCDAGDSVV----MFAPY--YFNSYMSFQMTGVTHILVGPCSSK 146
           + TA    A + +V+ L  AGD VV    +F      F    +    G+    V      
Sbjct: 80  VATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFA--RFGIETTFVDLT--- 134

Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               DA W       +P  KL  +  P NP  T + +  +  ++++  AAG+ LVVDN +
Sbjct: 135 --DLDA-WRAAV---RPNTKLFFLETPSNPL-TELAD--IAALAEIAHAAGALLVVDNCF 185

Length = 390

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 39.8 bits (94), Expect = 0.002
 Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 23/132 (17%)

Query: 276 ALYSLQTGPEWVTERVKDLVRNRE-IIREALS---PLGEGAVKG-GEGAIYLWARLPEKH 330
           +L++L    +   + +KD++R R   + E L    P             +  WA   EK+
Sbjct: 393 SLFALLDEEDAYKKAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWA---EKN 449

Query: 331 LDDFEVVRW-------------LAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAA 376
               E   +             LA   GVV++PGG  G     +R+S   L E+D     
Sbjct: 450 YGK-EFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIG 508

Query: 377 DRLRRGLEELVK 388
             +R+ L+E  +
Sbjct: 509 KAIRKLLDEYYE 520

Length = 527

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM---YDGRKHCCVEG 221
             L+ +V+P NP G  I    L  IS++C+  G+ L +D  +  F+    +         
Sbjct: 123 FDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSY 182

Query: 222 DHVVNLFSFSKAYGMMGWRVGYIA 245
            +V+   S +K  G+   R+GYIA
Sbjct: 183 GNVIIGRSLTKILGIPSLRIGYIA 206

Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	400
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PLN02187	462	rooty/superroot1	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK07324	373	transaminase; Validated	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PLN02656	409	tyrosine transaminase	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK06855	433	aminotransferase; Validated	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PRK08175	395	aminotransferase; Validated	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PLN02231	534	alanine transaminase	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PLN02368	407	alanine transaminase	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PLN02397	423	aspartate transaminase	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
PLN02822	481	serine palmitoyltransferase	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	100.0
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	100.0
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	100.0
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	100.0
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	100.0
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
PRK13392	410	5-aminolevulinate synthase; Provisional	100.0
PRK02948	381	cysteine desulfurase; Provisional	100.0
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	100.0
PLN02721	353	threonine aldolase	100.0
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	100.0
PRK10534	333	L-threonine aldolase; Provisional	100.0
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	100.0
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	100.0
PRK01278	389	argD acetylornithine transaminase protein; Provisi	100.0
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	100.0
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	100.0
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	100.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	100.0
PRK03244	398	argD acetylornithine aminotransferase; Provisional	100.0
PLN02409	401	serine--glyoxylate aminotransaminase	100.0
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.98
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.98
PLN02483	489	serine palmitoyltransferase	99.98
PRK07179	407	hypothetical protein; Provisional	99.98
PRK09064	407	5-aminolevulinate synthase; Validated	99.98
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.98
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.98
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.98
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.98
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.97
PRK13393	406	5-aminolevulinate synthase; Provisional	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.97
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.97
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.97
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.97
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.97
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.97
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.97
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.97
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.97
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.97
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.97
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.97
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.97
PRK14012	404	cysteine desulfurase; Provisional	99.97
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.97
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.96
PRK07049	427	methionine gamma-lyase; Validated	99.96
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.96
PLN02651	364	cysteine desulfurase	99.96
PRK06234	400	methionine gamma-lyase; Provisional	99.96
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.96
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.96
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.96
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.96
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.96
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.96
PRK04260	375	acetylornithine aminotransferase; Provisional	99.96
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.96
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.96
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.96
PLN02242	418	methionine gamma-lyase	99.96
PRK08861	388	cystathionine gamma-synthase; Provisional	99.96
PLN02955	476	8-amino-7-oxononanoate synthase	99.96
PLN00144	382	acetylornithine transaminase	99.96
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.96
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.96
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.96
PRK07505	402	hypothetical protein; Provisional	99.95
PRK06767	386	methionine gamma-lyase; Provisional	99.95
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.95
PRK08776	405	cystathionine gamma-synthase; Provisional	99.95
PRK08045	386	cystathionine gamma-synthase; Provisional	99.95
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.95
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.95
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.95
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.95
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.95
PRK08249	398	cystathionine gamma-synthase; Provisional	99.95
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.95
PRK09028	394	cystathionine beta-lyase; Provisional	99.95
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.95
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.95
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.95
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.95
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.95
PRK07503	403	methionine gamma-lyase; Provisional	99.95
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.95
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.95
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.95
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.95
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.95
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.95
PLN02624	474	ornithine-delta-aminotransferase	99.95
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.95
PRK06460	376	hypothetical protein; Provisional	99.95
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.95
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.95
PRK07050	394	cystathionine beta-lyase; Provisional	99.95
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.95
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.94
PRK07811	388	cystathionine gamma-synthase; Provisional	99.94
PRK08574	385	cystathionine gamma-synthase; Provisional	99.94
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.94
PRK07582	366	cystathionine gamma-lyase; Validated	99.94
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.94
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.94
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.94
PRK05968	389	hypothetical protein; Provisional	99.94
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.94
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.94
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.94
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.94
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.94
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.94
PRK05967	395	cystathionine beta-lyase; Provisional	99.93
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.93
PRK08064	390	cystathionine beta-lyase; Provisional	99.93
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.93
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.93
PRK05939	397	hypothetical protein; Provisional	99.93
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.93
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.93
PLN02509	464	cystathionine beta-lyase	99.93
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.93
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.93
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.93
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.93
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.93
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.93
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.93
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.93
PRK07671	377	cystathionine beta-lyase; Provisional	99.93
PRK08114	395	cystathionine beta-lyase; Provisional	99.92
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.92
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.92
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.92
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.92
PRK02769	380	histidine decarboxylase; Provisional	99.92
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.92
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.92
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.92
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.92
PRK07482	461	hypothetical protein; Provisional	99.92
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.91
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.91
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.91
PLN02724	805	Molybdenum cofactor sulfurase	99.91
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.91
PRK06541	460	hypothetical protein; Provisional	99.91
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.91
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.91
PLN02271	586	serine hydroxymethyltransferase	99.91
PRK03080	378	phosphoserine aminotransferase; Provisional	99.91
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.91
PRK06062	451	hypothetical protein; Provisional	99.91
PLN03032	374	serine decarboxylase; Provisional	99.91
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.9
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.9
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.9
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.9
PRK07678	451	aminotransferase; Validated	99.9
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.9
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.9
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.9
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.9
PRK05965	459	hypothetical protein; Provisional	99.9
PRK06105	460	aminotransferase; Provisional	99.9
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.9
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.9
PLN02880	490	tyrosine decarboxylase	99.9
PRK06917	447	hypothetical protein; Provisional	99.9
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.9
PLN02590	539	probable tyrosine decarboxylase	99.9
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.9
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.9
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.89
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.89
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.89
PRK07480	456	putative aminotransferase; Validated	99.89
PRK07483	443	hypothetical protein; Provisional	99.89
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.89
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.89
PRK07046	453	aminotransferase; Validated	99.89
PRK12403	460	putative aminotransferase; Provisional	99.89
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.89
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.89
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.89
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.89
PRK07481	449	hypothetical protein; Provisional	99.89
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.89
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.89
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.88
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.88
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.88
PRK07036	466	hypothetical protein; Provisional	99.88
PRK06434	384	cystathionine gamma-lyase; Validated	99.88
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.88
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.88
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.87
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.87
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.86
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.86
PRK06148	1013	hypothetical protein; Provisional	99.86
PRK08297	443	L-lysine aminotransferase; Provisional	99.86
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.86
PLN02263	470	serine decarboxylase	99.86
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.85
PRK13237	460	tyrosine phenol-lyase; Provisional	99.85
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.85
PRK04311	464	selenocysteine synthase; Provisional	99.85
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.84
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.84
PRK06149	972	hypothetical protein; Provisional	99.84
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.83
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.83
PRK05367	954	glycine dehydrogenase; Provisional	99.82
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.82
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.81
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.81
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.81
PRK15029	755	arginine decarboxylase; Provisional	99.81
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.81
PRK12566	954	glycine dehydrogenase; Provisional	99.8
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.8
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.8
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.8
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.8
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.79
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.77
PLN02452	365	phosphoserine transaminase	99.77
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.77
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.76
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.75
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.72
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.72
PRK15400	714	lysine decarboxylase CadA; Provisional	99.72
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.72
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.72
PRK13578	720	ornithine decarboxylase; Provisional	99.71
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.71
PRK12462	364	phosphoserine aminotransferase; Provisional	99.7
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.7
PRK05367	954	glycine dehydrogenase; Provisional	99.68
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.66
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.66
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.64
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.58
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.57
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.53
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.49
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.45
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	99.42
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	99.4
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.38
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.37
COG4100	416	Cystathionine beta-lyase family protein involved i	99.32
KOG0629	510	consensus Glutamate decarboxylase and related prot	99.24
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	99.22
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.21
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	99.19
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	99.11
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	99.1
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.02
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.94
PRK12566	954	glycine dehydrogenase; Provisional	98.91
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.79
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	98.67
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	98.14
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	97.62
PLN02672	1082	methionine S-methyltransferase	97.53
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.39
CHL00200	263	trpA tryptophan synthase alpha subunit; Provisiona	90.65
TIGR00262	256	trpA tryptophan synthase, alpha subunit. Tryptopha	90.44
COG0159	265	TrpA Tryptophan synthase alpha chain [Amino acid t	88.69
PLN02591	250	tryptophan synthase	83.71
COG2102	223	Predicted ATPases of PP-loop superfamily [General	83.39
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	82.66
COG1105	310	FruK Fructose-1-phosphate kinase and related fruct	81.23

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.3e-55  Score=409.37  Aligned_cols=349  Identities=31%  Similarity=0.514  Sum_probs=315.1

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCc-EEEeCChHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSS-VMVTAGANQAFVNIV  106 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~-i~~~~g~t~a~~~~~  106 (400)
                      .++|+|+.|+|+++.|+.+++++.+++.++.. .|.+..|.+++|+++++++.+++|+  .+++ |++|+|+++|+..++
T Consensus        28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~  106 (393)
T COG0436          28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAF  106 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHH
Confidence            47999999999999999999999999987533 6779999999999999999999874  4555 999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      .++.+|||+|++++|.|+.+...++..|++++.+ |++.  ++|.+|.+.|++.+++++  |+|++++||||||.+++.+
T Consensus       107 ~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v-~l~~~~~~f~~d~~~l~~~i~~kt--k~i~ln~P~NPTGav~~~~  183 (393)
T COG0436         107 LALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPV-PLDEEENGFKPDLEDLEAAITPKT--KAIILNSPNNPTGAVYSKE  183 (393)
T ss_pred             HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEE-eCCcCccCCcCCHHHHHhhcCccc--eEEEEeCCCCCcCcCCCHH
Confidence            9999999999999999999999999999999999 8754  589999999999999876  9999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCC-Ccccc--C--CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGR-KHCCV--E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~~--~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      ++++|+++|++||+++|+||+|..+.+++. .....  .  .++.+.+.|+||.++++|||+||+++++  +++++.+.+
T Consensus       184 ~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~--~~l~~~~~~  261 (393)
T COG0436         184 ELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP--EELIAALRK  261 (393)
T ss_pred             HHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh--HHHHHHHHH
Confidence            999999999999999999999999999874 22222  2  3679999999999999999999999886  688888888


Q ss_pred             hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCCceEEEeeCCCCCCCHHHH
Q 015768          260 VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  336 (400)
                      ......++++.+.|.++..+|+...  ++...+++.++++++.+.+.|.+.+++.+.. |.+++|+|++++.. .+..++
T Consensus       262 ~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~-~d~~~f  340 (393)
T COG0436         262 LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL-LDSEEF  340 (393)
T ss_pred             HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-CCHHHH
Confidence            8888888999999999999999753  4777888899999999999999998767776 88899999999876 589999


Q ss_pred             HHHHHHhcCeEEeCCCccCCC---CeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          337 VRWLAHRHGVVVIPGGACGCR---GHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.+|++++||.+.||..|+.+   +++|++++. +.+.++++++++.++++.+
T Consensus       341 ~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~~  392 (393)
T COG0436         341 AKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAEY  392 (393)
T ss_pred             HHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999864   899999997 6799999999999998764

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=4.1e-51  Score=387.12  Aligned_cols=370  Identities=22%  Similarity=0.405  Sum_probs=321.3

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      +++++|+.....+.+..+.+.. .+++.++|+.|.+++++++.+.+++.+.+.+. ...|++..|.+++|+++++++.+.
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~  107 (413)
T PLN00175         30 LQVAKRLEKFKTTIFTQMSSLA-IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKD  107 (413)
T ss_pred             cchhHHhhcCCCCHHHHHHHHh-hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHH
Confidence            4578888887777787776664 44689999999999988899999998888763 567999999999999999999988


Q ss_pred             cCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768           85 NKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus        85 ~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      +|+  +++ +|++|+|+++++..++.++++|||+|++++|+|+.+...++..|++++.+ +.+++++.++++.+++.+.+
T Consensus       108 ~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~l~~~~~~  186 (413)
T PLN00175        108 TGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTV-TLRPPDFAVPEDELKAAFTS  186 (413)
T ss_pred             hCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-ECCcccCCCCHHHHHHhcCc
Confidence            774  465 79999999999999999999999999999999999999999999999999 88766678899999999876


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCC
Q 015768          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~  237 (400)
                      ++  |+|++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+++....  ..  ..+++++++||||.+|++
T Consensus       187 ~~--k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~  264 (413)
T PLN00175        187 KT--RAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT  264 (413)
T ss_pred             Cc--eEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence            65  9999999999999999999999999999999999999999999887643211  11  246789999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  317 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  317 (400)
                      |+|+||++++   +++++.+........++++.+.|.++..+|+..+.++++.++.++++++.+.+.|++.+ +.+..|.
T Consensus       265 G~RiG~~v~~---~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~  340 (413)
T PLN00175        265 GWKIGWAIAP---PHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSS  340 (413)
T ss_pred             chheeeeEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCC
Confidence            9999999999   78989888877666788999999999999987667888999999999999999999986 4777888


Q ss_pred             CceEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       318 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +++|+|++++. ...+..+++.++++++||.+.||..|+     ..+++||+++. +++++++++++|+++++
T Consensus       341 g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        341 GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLK  412 (413)
T ss_pred             eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence            89999999853 222467899988878899999999874     24699999996 89999999999998875

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=1.1e-50  Score=383.03  Aligned_cols=370  Identities=21%  Similarity=0.315  Sum_probs=305.5

Q ss_pred             hHHHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 015768            6 KLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL   81 (400)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l   81 (400)
                      .+++|+.......+..+.+.    .+.+++.++|+.|++++++++.+.+++.+.+.......|++..|.+++|+++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~   81 (388)
T PRK07366          2 QFAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWY   81 (388)
T ss_pred             chhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHH
Confidence            35777765555555444333    34578899999999999989999999998876554667988899999999999999


Q ss_pred             HhhcC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHH
Q 015768           82 NQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEK  157 (400)
Q Consensus        82 ~~~~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~  157 (400)
                      .+.+|  ++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+ |.+++ ++.+|++++++
T Consensus        82 ~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~  160 (388)
T PRK07366         82 EQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPM-PLRAENDFLPVFADIPT  160 (388)
T ss_pred             HHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ECCCccCCCCCHHHHHH
Confidence            88876  5677 69999999999999999999999999999999999999999999999999 88754 57788888887


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-cc---cc--CCCcEEEEeccc
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HC---CV--EGDHVVNLFSFS  231 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~---~~--~~~~~i~~~s~s  231 (400)
                      .+..++  |++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++.. ..   ..  ..+++++++|||
T Consensus       161 ~~~~~~--k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS  238 (388)
T PRK07366        161 EVLAQA--RLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLS  238 (388)
T ss_pred             hhcccc--eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecc
Confidence            776554  99999999999999999999999999999999999999999999876532 11   11  124678999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.+|++|+|+||++++   +++++++.........+.....+.++..++....+++++.++.++++++.+.+.|++++. 
T Consensus       239 K~~g~~GlRiG~~v~~---~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~-  314 (388)
T PRK07366        239 KSYNMGGFRIGFAIGN---AQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGW-  314 (388)
T ss_pred             cccCCcchhheehcCC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence            9999999999999988   889998888776555554444445555566544678889999999999999999998864 


Q ss_pred             cccCCCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      .+..|.+++|+|++++... .+..+++.++++++||.+.||..|+.  ++++||+++. +++++++++++|++++
T Consensus       315 ~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l  388 (388)
T PRK07366        315 PVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL  388 (388)
T ss_pred             cccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence            6667888999999998642 24677888887789999999998863  5899999986 8999999999998763

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.6e-50  Score=377.78  Aligned_cols=376  Identities=35%  Similarity=0.675  Sum_probs=324.2

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      |++++|+.....+.+..+....+..++.++|+.|.+++++|+.+.+++.+.+.......|++..|.+++++++++++.+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~   81 (389)
T PRK05957          2 TQFTSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQD   81 (389)
T ss_pred             chhhHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            67899987777777766776777777899999999999889999999998876554567988899999999999999988


Q ss_pred             cCCC---CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768           85 NKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus        85 ~~~~---~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      +|++   +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.+ |.++ ++.+|++.+++.+++
T Consensus        82 ~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~  159 (389)
T PRK05957         82 NGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILV-PTDD-NYQLQPEAIEQAITP  159 (389)
T ss_pred             hCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEe-ecCC-CCCcCHHHHHHhcCc
Confidence            8763   6789999999999999999999999999999999999988889999999999 8763 457899999999876


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-----ccCCCcEEEEeccccccCC
Q 015768          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-----CVEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~  236 (400)
                      ++  |+|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++.+..     .....++++++|+||.+|+
T Consensus       160 ~~--klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~  237 (389)
T PRK05957        160 KT--RAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF  237 (389)
T ss_pred             Cc--eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccC
Confidence            55  9999999999999999999999999999999999999999999887643211     1234578999999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-CcccC
Q 015768          237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG  315 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~  315 (400)
                      +|+|+||++.+   +++++++.........+++.+.|.++..+|+.+.+++++..+.++++++.+.+.|++++. ..+..
T Consensus       238 ~GlRiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~  314 (389)
T PRK05957        238 ASWRIGYMVIP---IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP  314 (389)
T ss_pred             ccceeEEEecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC
Confidence            99999999998   789999988776556677889999999999876677888888899999999999998765 36677


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +.+++|+|++++.. .+..+++.++++++||.+.||..|+.  ++++||+++..+.+++++++++|.+.++++.+
T Consensus       315 ~~gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~  388 (389)
T PRK05957        315 ANGAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ  388 (389)
T ss_pred             CCeeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence            88899999999754 36788999988779999999998864  46999999877899999999999999988754

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.8e-50  Score=378.48  Aligned_cols=368  Identities=22%  Similarity=0.356  Sum_probs=315.4

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      +++++.......+..+.+.....++.++|+.|++++++++.+++++.+..... ...|++..|.+++|+++++++.+.+|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~   84 (384)
T PRK06348          6 LAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYD   84 (384)
T ss_pred             HHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            68888776677777777776666789999999999988888888776655443 56798899999999999999987764


Q ss_pred             --CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCC
Q 015768           87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKP  163 (400)
Q Consensus        87 --~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~  163 (400)
                        +++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+ |.+ ++++.+|++.+++.+++++
T Consensus        85 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~  163 (384)
T PRK06348         85 LSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIIL-ETYEEDGFQINVKKLEALITSKT  163 (384)
T ss_pred             CCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEe-cCCcCcCCcCCHHHHHHhhCcCc
Confidence              568999999999999999999999999999999999999999999999999988 764 4577889999999887654


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccC--CCcEEEEeccccccCCCcc
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVE--GDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~--~~~~i~~~s~sK~~g~~g~  239 (400)
                        ++|++++|+||||.+++.+++++|.++|+++++++|+||+|.++.+++...  ....  .+++++++||||.+|++|+
T Consensus       164 --~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl  241 (384)
T PRK06348        164 --KAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW  241 (384)
T ss_pred             --cEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc
Confidence              999999999999999999999999999999999999999999988764221  1122  5689999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      |+||++++   +++++.+........++++.+.|.++..++...+++.++.++.++++++.+.+.|+.++...+..|+++
T Consensus       242 RiG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg  318 (384)
T PRK06348        242 RIGYVIAP---DYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGS  318 (384)
T ss_pred             cceeeecC---HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCee
Confidence            99999998   788888888776667788999999999999875677788888899999999999998766677888889


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +|+|++++....+..+++..+++++||.+.||..|+.  ++++|++++. +++++++++++|++.
T Consensus       319 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~  382 (384)
T PRK06348        319 IYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEKM  382 (384)
T ss_pred             EEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHhh
Confidence            9999999753346888998887778999999999864  5799999985 899999999998653

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=8.4e-51  Score=355.46  Aligned_cols=357  Identities=23%  Similarity=0.351  Sum_probs=317.9

Q ss_pred             HHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChH
Q 015768           22 IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN   99 (400)
Q Consensus        22 ~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t   99 (400)
                      .++.+.+..|+++|.+++++|+.||++++|+.+..+++ ..+|  +.+.+++.+++.+|.+++++  ++++.|++++|..
T Consensus        17 KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY--~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VV   93 (388)
T COG1168          17 KWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVDHG-VFGY--PYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVV   93 (388)
T ss_pred             eccccCCCCCcceeeeecccCCCCHHHHHHHHHHHhcC-CCCC--CCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcch
Confidence            34444577999999999999999999999999999986 5556  37788999999999999985  5689999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (400)
Q Consensus       100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt  177 (400)
                      -++..+++++++|||.|++..|.|+++....+..|-+++.. |+..  +.+.+|.++|++.+.+.. +|+.++||||||+
T Consensus        94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~-pL~~~~~~y~iD~~~LE~~~~~~~-vkl~iLCnPHNP~  171 (388)
T COG1168          94 PGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIEN-PLVEDDGRYEIDFDALEKAFVDER-VKLFILCNPHNPT  171 (388)
T ss_pred             HhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEec-cccccCCcEEecHHHHHHHHhcCC-ccEEEEeCCCCCC
Confidence            99999999999999999999999999999999999999988 8753  347889999999998553 6999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc------CCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  251 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~------~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~  251 (400)
                      |.+++.++|++|.++|.+||+.+|+||.|..+.+.+.++...      ..++.+.+.|.||.|+++|+.+++++.+|  +
T Consensus       172 Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n--~  249 (388)
T COG1168         172 GRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN--R  249 (388)
T ss_pred             CccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC--H
Confidence            999999999999999999999999999999999988554332      24778899999999999999999988887  6


Q ss_pred             HHHHHH-HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCC
Q 015768          252 GFATQL-LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEK  329 (400)
Q Consensus       252 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~  329 (400)
                      ++..+. +........++|.++..|...+++++.+|+++..+-++.|++++.+.|++ +|++++..|++.+.+|+++...
T Consensus       250 ~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l  329 (388)
T COG1168         250 ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCREL  329 (388)
T ss_pred             HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeecccc
Confidence            664443 34444567788999999999999999999999999999999999999998 6889999999999999999988


Q ss_pred             CCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          330 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       330 ~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..+..++.++++++.+|.+.+|..|+  +.+++|+++++ ++..+++++++|+.++++.
T Consensus       330 ~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~  387 (388)
T COG1168         330 GLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR  387 (388)
T ss_pred             CCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence            88888999999999999999999998  46899999997 9999999999999998764

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-50  Score=379.99  Aligned_cols=367  Identities=22%  Similarity=0.372  Sum_probs=312.0

Q ss_pred             hhHHHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |++++|+.......+..+.+..    ..++++++|+.|++++++++.+.+++.+.+.+....+|+ ..|..++|++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~   81 (399)
T PRK07681          3 YTLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEY   81 (399)
T ss_pred             ccHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHH
Confidence            4567777765555555555543    346789999999999988899999998887654344453 57999999999999


Q ss_pred             HHhhcCC--CC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHH
Q 015768           81 LNQENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE  156 (400)
Q Consensus        81 l~~~~~~--~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~  156 (400)
                      +.+.+|+  ++ ++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ |.+++ ++.+|++.++
T Consensus        82 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~  160 (399)
T PRK07681         82 YNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYM-PLKKENDFLPDLELIP  160 (399)
T ss_pred             HHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence            9988764  56 799999999999999999999999999999999999999999999999999 88754 5788999998


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~s  231 (400)
                      +.+.+++  ++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.....   .  ..+++++++|||
T Consensus       161 ~~~~~~~--k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S  238 (399)
T PRK07681        161 EEIADKA--KMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLS  238 (399)
T ss_pred             Hhccccc--eEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecc
Confidence            8886554  99999999999999999999999999999999999999999999876532211   1  235789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.+|++|+|+||++.+   +++++++........++++.+.+.++..+|+.+.+++++.++.++++++.+.+.|++.+ +
T Consensus       239 K~~~~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~  314 (399)
T PRK07681        239 KSYSLAGSRIGYMIGN---EEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG-W  314 (399)
T ss_pred             cccCCccceeEEEecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence            9999999999999988   88999988877666778899999999999987667888888899999999999999885 4


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .+..|.+++|+|++++.. .+..+++.++++++||.+.||..|+.  ++++||+++. +++++++++++|++
T Consensus       315 ~~~~p~~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~  384 (399)
T PRK07681        315 NVDKPAGSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN  384 (399)
T ss_pred             cccCCCeeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence            676788899999999854 36778999898669999999998863  5799999995 88999999999987

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3e-50  Score=380.85  Aligned_cols=351  Identities=22%  Similarity=0.334  Sum_probs=303.5

Q ss_pred             CCeEEcCCCCCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CC-CcEEEeCChHHHHHHH
Q 015768           30 KNAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YK-SSVMVTAGANQAFVNI  105 (400)
Q Consensus        30 ~~~i~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~-~~i~~~~g~t~a~~~~  105 (400)
                      ++.++|+.|+++ .++|+.+.+++.+.+.......|++..|.+++|+++++++++.+|+  ++ ++|++|+|+++++..+
T Consensus        39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~  118 (405)
T PRK06207         39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLA  118 (405)
T ss_pred             CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHH
Confidence            678999999977 4677889999888876654567988899999999999999998874  56 8999999999999999


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC----CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      +.+++++||+|++++|+|+.+...++..|.+++.+ +.+    ++++.+|++.+++.+++++  +++++++|+||||.++
T Consensus       119 ~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~~~~d~~~l~~~~~~~~--k~v~l~~P~NPTG~~~  195 (405)
T PRK06207        119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYLSADKRAGLDLDQLEEAFKAGV--RVFLFSNPNNPAGVVY  195 (405)
T ss_pred             HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eccccCcccCCCcCHHHHHHhhhhcC--eEEEECCCCCCCCcCC
Confidence            99999999999999999999999999999999988 775    2356789999999887655  8999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      +.+++++|+++|++||+++|+||+|..+.+++.+..     ....+++++++||||.++++|+|+||++.+   ++++++
T Consensus       196 s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~---~~l~~~  272 (405)
T PRK06207        196 SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS---PAIIDR  272 (405)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC---HHHHHH
Confidence            999999999999999999999999999987653321     123578899999999999999999999988   789999


Q ss_pred             HHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHH
Q 015768          257 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       257 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (400)
                      +.........+.+.+.|.++..+|+.+..++.+..+.++++++.+.+.|++++.+.+..|.+++|+|++++....+..++
T Consensus       273 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~  352 (405)
T PRK06207        273 MEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDF  352 (405)
T ss_pred             HHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHH
Confidence            88877666667788899999999986556778888888888999999998876567777888999999998633367888


Q ss_pred             HHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          337 VRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +..+++++||.+.||..|+  .++++||+++. +.+++++++++|+++++++.
T Consensus       353 ~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~~  404 (405)
T PRK06207        353 VKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERYR  404 (405)
T ss_pred             HHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence            8888767899999999885  36899999997 89999999999999997753

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-49  Score=374.48  Aligned_cols=370  Identities=25%  Similarity=0.367  Sum_probs=313.5

Q ss_pred             HHHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +++|+.+.....+.++.+.    ...++++++|+.|.+++++|+.+++++.+.+... ...|++..|.+++|+++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~   83 (387)
T PRK08960          5 YSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAG-HTRYTAARGLPALREAIAGFYA   83 (387)
T ss_pred             hhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCccCCCCCCHHHHHHHHHHHH
Confidence            5677776666666654443    4557899999999999988999999999988754 4568888999999999999998


Q ss_pred             hhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhh
Q 015768           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l  159 (400)
                      +.+|  +++++|++|+|+++++..++.++.++||+|++++|+|+.+...++..|.+++.+ |.+.+ ++.+|++.+++.+
T Consensus        84 ~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~  162 (387)
T PRK08960         84 QRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLV-PVGPDSRYQLTPALVERHW  162 (387)
T ss_pred             HHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEE-ecCcccCCCCCHHHHHHHh
Confidence            8765  568999999999999999999999999999999999999999999999999988 88755 5778999999988


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCc
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      ++++  +++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.... ....+++++++|+||.+|++|
T Consensus       163 ~~~~--~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G  240 (387)
T PRK08960        163 NADT--VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTG  240 (387)
T ss_pred             Cccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcc
Confidence            8665  8889999999999999999999999999999999999999998877543221 122467899999999999999


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  317 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  317 (400)
                      +|+||++.+   +++++++.........+++.+.|.++..++.. ..+++.+.++.++++++.+.+.|++++...+..|.
T Consensus       241 lRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~  317 (387)
T PRK08960        241 WRLGWLVAP---PAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ  317 (387)
T ss_pred             cEEEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence            999999999   78888888777666677899999999888874 24678888889999999999999988653334677


Q ss_pred             CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +++|+|++++....+..+++.++++++||.+.||..|+.   ++++|++++. +.+.+.+++++|+++++
T Consensus       318 g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~  386 (387)
T PRK08960        318 GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR  386 (387)
T ss_pred             eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            899999999863336788888887789999999998864   4699999996 88999999999998875

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5e-49  Score=372.91  Aligned_cols=374  Identities=25%  Similarity=0.365  Sum_probs=319.2

Q ss_pred             hhHHHHhhhcCchHHHHHH----HHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQ----ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |+.++|+.....+.+.++.    +..+.++++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~   82 (402)
T PRK06107          4 FVPAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAIIAK   82 (402)
T ss_pred             hhhhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHH
Confidence            4788898765555554432    234567889999999999988899999998888654 46798889999999999999


Q ss_pred             HHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHH
Q 015768           81 LNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEK  157 (400)
Q Consensus        81 l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~  157 (400)
                      +++.+|.  .+++|++|+|+++|+..++.++.++||+|++++|+|.++...+...+..++.+ +.+ ++++.++++.+++
T Consensus        83 l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~  161 (402)
T PRK06107         83 LERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIV-ACPEEQGFKLTPEALEA  161 (402)
T ss_pred             HHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEe-cCCcccCCCCCHHHHHh
Confidence            9988776  57899999999999999999999999999999999999998888888888888 775 4567889999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEcccccccccCCCCccc---c---CCCcEEEEecc
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-GSWLVVDNTYEYFMYDGRKHCC---V---EGDHVVNLFSF  230 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-~~~li~D~a~~~~~~~~~~~~~---~---~~~~~i~~~s~  230 (400)
                      .+.+++  +++++++|+||||.+++.+++++++++|++| ++++|+||+|..+.+.+.....   .   ..+++++++|+
T Consensus       162 ~~~~~~--~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~  239 (402)
T PRK06107        162 AITPRT--RWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGV  239 (402)
T ss_pred             hcCcCc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEecc
Confidence            887554  8999999999999999999999999999998 9999999999988775532221   1   13579999999


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768          231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      ||.+|++|+|+||++.+   +++++.+.......+.+++.+.|.++..+|+.+..++++.++.+.++++.+.+.|+++++
T Consensus       240 SK~~~~pGlRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g  316 (402)
T PRK06107        240 SKTYAMTGWRIGYAAGP---ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPG  316 (402)
T ss_pred             chhhcCcccceeeeecC---HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999998   789999988877667889999999999999866678888899999999999999998866


Q ss_pred             CcccCCCCceEEEeeCCCC----------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          311 GAVKGGEGAIYLWARLPEK----------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      +.+..|.+++|+|++++..          ..+..+++.++++++||.+.||..|+.++++|++++. +++++++++++|+
T Consensus       317 ~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~  395 (402)
T PRK06107        317 LSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACARIE  395 (402)
T ss_pred             CcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHH
Confidence            6888888999999987421          1245678888888899999999999888999999996 8999999999999


Q ss_pred             HHHHHH
Q 015768          381 RGLEEL  386 (400)
Q Consensus       381 ~~l~~~  386 (400)
                      ++++++
T Consensus       396 ~~l~~~  401 (402)
T PRK06107        396 RAVAAL  401 (402)
T ss_pred             HHHHhc
Confidence            998764

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=3.3e-49  Score=372.98  Aligned_cols=369  Identities=21%  Similarity=0.322  Sum_probs=308.5

Q ss_pred             hhHHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      +++++++.....+.+..+..    ..+.++++++|+.++++.++++.+.+++.+.+.......|++..|.+++|++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~   82 (389)
T PRK08068          3 FEPSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADF   82 (389)
T ss_pred             CchhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Confidence            45777876655444444433    23456789999999988877888999998887765466798889999999999999


Q ss_pred             HHhhcC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHH
Q 015768           81 LNQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE  156 (400)
Q Consensus        81 l~~~~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~  156 (400)
                      +.+.+|  ++++ +|++|+|+++++..++.++.++||+|++++|+|+.+...++..|++++.+ |.+++ |+.+|+++++
T Consensus        83 ~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~  161 (389)
T PRK08068         83 YKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETM-PLIAENNFLPDYTKIP  161 (389)
T ss_pred             HHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEe-ecccccCCCCCHHHHH
Confidence            988776  5677 89999999999999999999999999999999999999999999999999 88754 7888999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-ccc---c-CCCcEEEEeccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HCC---V-EGDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~~---~-~~~~~i~~~s~s  231 (400)
                      +.+..++  ++|++++||||||.++|.+++++|+++|++|++++|+||+|..+.+++.. ...   . ..++.++++|||
T Consensus       162 ~~~~~~~--~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~S  239 (389)
T PRK08068        162 EEVAEKA--KLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLS  239 (389)
T ss_pred             Hhccccc--eEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecch
Confidence            8886554  99999999999999999999999999999999999999999988776422 111   1 235789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.||++|+|+||++.+   +++++.+.........+.+++.+.++..++....+++++.++.++++++.+.+.|++++. 
T Consensus       240 K~~g~~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~-  315 (389)
T PRK08068        240 KTFNMAGWRVAFAVGN---ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGW-  315 (389)
T ss_pred             hccCCccceeEeEecC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence            9999999999999988   889998887776555566667788888888765678888999999999999999998864 


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      .+..+.+++|+|++++... +..++.+++++++||.+.||..|+.  ++++||+++. +++.+.+++++|+++
T Consensus       316 ~~~~~~g~~~~~v~~~~~~-~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~  386 (389)
T PRK08068        316 EVDAPKGSFFAWMPVPKGY-TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL  386 (389)
T ss_pred             cccCCCeeEEEEEECCCCC-CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence            6777888899999997643 6788999887668999999998864  5799999986 778888888888753

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-49  Score=371.97  Aligned_cols=368  Identities=26%  Similarity=0.388  Sum_probs=307.9

Q ss_pred             hhHHHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |++++|+.......+..+...    .+.+++.++|+.|++++++++.+.+++.+.+.......|++..|.+++|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~   81 (385)
T PRK09276          2 MKLADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADW   81 (385)
T ss_pred             cchhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence            455677776555544443333    3467889999999999988899999999887654456798888999999999999


Q ss_pred             HHhhcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHH
Q 015768           81 LNQENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLE  156 (400)
Q Consensus        81 l~~~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~  156 (400)
                      +.+.+|.  +++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.+ |.++ +|+.+|++.++
T Consensus        82 ~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~d~~~l~  160 (385)
T PRK09276         82 YKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFM-PLKEENGFLPDLDAIP  160 (385)
T ss_pred             HHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence            9988764  465 58999999999999999999999999999999999999999999999999 8864 47888999998


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~s  231 (400)
                      +.+..++  ++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.....   .  ..+++++++|||
T Consensus       161 ~~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S  238 (385)
T PRK09276        161 EDVAKKA--KLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLS  238 (385)
T ss_pred             Hhccccc--eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecch
Confidence            8887655  99999999999999999999999999999999999999999988875432211   1  135679999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.+|++|+|+||++++   +++++.+.........+.+.+.+.++..+++....++++.++.++++++.+.+.|++++ +
T Consensus       239 K~~g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~  314 (385)
T PRK09276        239 KTYNMTGWRIGFAVGN---ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-L  314 (385)
T ss_pred             hhcCCcchhheeeeCC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence            9999999999999988   78888888766555556777889999999976567888889999999999999999885 4


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .+..+.+++|+|++++... +..+++.++++++||.+.||..|+.  ++++||+++. +++++.+++++|.+
T Consensus       315 ~~~~~~~~~~~~v~~~~~~-~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  384 (385)
T PRK09276        315 EVEPPKATFYVWAPVPKGY-TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK  384 (385)
T ss_pred             cccCCCcceEEEEECCCCC-CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence            7777888899999998643 6788888888778999999988864  5799999985 88888888888764

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.4e-49  Score=371.08  Aligned_cols=367  Identities=26%  Similarity=0.417  Sum_probs=313.3

Q ss_pred             HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--
Q 015768            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--   86 (400)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--   86 (400)
                      +++.+...+.+..+.......++.++|+.|++++++++.+.+++.+.+.+. ...|++..|.+++|+++++++.+.+|  
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~la~~~~~~~~~~   81 (382)
T PRK06108          3 PAARALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADG-ETFYTHNLGIPELREALARYVSRLHGVA   81 (382)
T ss_pred             hhhhhCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            344444555556666665566789999999999998999999999888764 35698889999999999999998877  


Q ss_pred             CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCC
Q 015768           87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPT  164 (400)
Q Consensus        87 ~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~  164 (400)
                      +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ |.++  +++.+|++.+++.+++++ 
T Consensus        82 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~-  159 (382)
T PRK06108         82 TPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCV-PLDFGGGGWTLDLDRLLAAITPRT-  159 (382)
T ss_pred             cCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEe-eCCCCCCCccCCHHHHHHhcCccc-
Confidence            678999999999999999999999999999999999999999999999999999 8864  356789999999887654 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC-CCCcc----cc-CCCcEEEEeccccccCCCc
Q 015768          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD-GRKHC----CV-EGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~-~~~~~----~~-~~~~~i~~~s~sK~~g~~g  238 (400)
                       +++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.++ +....    .. ..+++++++|+||.+|++|
T Consensus       160 -~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G  238 (382)
T PRK06108        160 -RALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTG  238 (382)
T ss_pred             -eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcc
Confidence             89999999999999999999999999999999999999999998875 22111    11 2367899999999999899


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +|+||++++   +++++.+.........+++.+.+.++..+|+.+.+++++.+++++++++.+.+.|++++++.+..|.+
T Consensus       239 ~RiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~  315 (382)
T PRK06108        239 WRLGWLVAP---PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDG  315 (382)
T ss_pred             cceeeeeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCe
Confidence            999999998   78888887765545567889999999999987667788889999999999999999886667778888


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ++|+|++++... +..+++.+|++++||.+.||..|+  .++++|++++. +++++++++++|+++++
T Consensus       316 g~~~~~~l~~~~-~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        316 AMYAFFRIPGVT-DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA  381 (382)
T ss_pred             eEEEEEeCCCCC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            999999997543 577898888878999999999885  36799999998 99999999999998874

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=6.7e-49  Score=370.50  Aligned_cols=365  Identities=25%  Similarity=0.372  Sum_probs=306.4

Q ss_pred             HHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      ++|+.....+.+..+...+    +.+++.++|+.|++++++++.+++++.+.+.......|++..|.+++|+++++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~   82 (383)
T TIGR03540         3 ADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKR   82 (383)
T ss_pred             chhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            4555544444444444433    356899999999999988899999999887655467798888999999999999998


Q ss_pred             hcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768           84 ENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (400)
Q Consensus        84 ~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l  159 (400)
                      .+|+  +++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ |.++ +|+.+|++++++.+
T Consensus        83 ~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v-~~~~~~g~~~d~~~l~~~~  161 (383)
T TIGR03540        83 RFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEM-PLKEENGFLPDFDAIPEDI  161 (383)
T ss_pred             hhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEE-ecCcccCCccCHHHHHhhc
Confidence            8765  455 68999999999999999999999999999999999999999999999999 8874 46778999999888


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEecccccc
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAY  234 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~  234 (400)
                      .+++  ++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.+.+.....   .  ..+++++++||||.+
T Consensus       162 ~~~~--~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~  239 (383)
T TIGR03540       162 AKKA--KLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTY  239 (383)
T ss_pred             cccc--eEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEeccccc
Confidence            7654  99999999999999999999999999999999999999999988775422211   1  135778999999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      |++|+|+||++.+   +++++++.........+.+.+.+.++..+++...+|+++.++.+.++++.+.+.|++++ +.+.
T Consensus       240 g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~  315 (383)
T TIGR03540       240 NMTGWRIGMAVGN---ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVE  315 (383)
T ss_pred             CCccceeeEEeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEec
Confidence            9999999999988   78888888766545566778899999999987678888889999999999999999985 4777


Q ss_pred             CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .+.+++|+|++++.. .+..+++.++++++||.+.||..|+.  ++++||+++. +++++++++++|++
T Consensus       316 ~~~~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  382 (383)
T TIGR03540       316 KPKATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK  382 (383)
T ss_pred             CCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence            788899999999854 36788998887789999999998863  5799999985 78888888888764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=1.4e-48  Score=368.56  Aligned_cols=373  Identities=25%  Similarity=0.415  Sum_probs=315.1

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      .++|+.+...+.+.++.+..++.+++++|+.|++++++++.+.+++.+.+... ...|++..|.+++++++++++.+.++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~   85 (391)
T PRK07309          7 FNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYN   85 (391)
T ss_pred             HHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            35666666666777777766666889999999999988888999988877643 35688888999999999999988877


Q ss_pred             C--C-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-
Q 015768           87 L--Y-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-  162 (400)
Q Consensus        87 ~--~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-  162 (400)
                      +  . +++|++|+|+++++..++.++.++||+|++++|+|.++...++..|.+++.+ |.+++++.+|.+.+++.++.. 
T Consensus        86 ~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~  164 (391)
T PRK07309         86 LDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEI-DTTENDFVLTPEMLEKAILEQG  164 (391)
T ss_pred             CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEE-ecCCcCCcCCHHHHHHHhhccC
Confidence            5  3 4789999999999999999999999999999999999999999999999999 887777788999999988642 


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCCcEEEEeccccccCCCcc
Q 015768          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~g~~g~  239 (400)
                      ..++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+.+.....   ...+++++++|+||.+|++|+
T Consensus       165 ~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  244 (391)
T PRK07309        165 DKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW  244 (391)
T ss_pred             CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc
Confidence            23599999999999999999999999999999999999999999999875432211   234788999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      |+||++++   +++++++.........+++.+.|.++..+++++..+....++.++++++.+.+.|++++ +.+..|.++
T Consensus       245 RvG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg  320 (391)
T PRK07309        245 RIGLIFAP---AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGA  320 (391)
T ss_pred             eeEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCee
Confidence            99999999   78888888765444557788999999999987555556667788888999999999886 477778889


Q ss_pred             eEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       320 ~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +|+|++++... .+..+++.++++++||.+.||..|+.  ++++|++++. +.+++++++++|+++++++
T Consensus       321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~  389 (391)
T PRK07309        321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEH  389 (391)
T ss_pred             EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            99999987542 24677887777789999999998864  6799999996 7899999999999999765

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=6.1e-49  Score=372.43  Aligned_cols=356  Identities=19%  Similarity=0.279  Sum_probs=299.4

Q ss_pred             hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~  100 (400)
                      ..++++|+|+.|+++    +++|+.+++++.+.+.+.....|++..|..++|+++++++.+.+|  +++++|++|+|+++
T Consensus        29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~  108 (409)
T PLN00143         29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH  108 (409)
T ss_pred             CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence            457899999999998    889999999999988876567798889999999999999988765  56899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (400)
Q Consensus       101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~  179 (400)
                      ++..++.+++++||.|+++.|+|+.+...++..|.+++.+ +.+ ++++.+|++.++++++.++  +++++++||||||.
T Consensus       109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~~~~~nP~NPTG~  185 (409)
T PLN00143        109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHF-DLLPEKGWEVDLDAVEAIADENT--IAMVIINPGNPCGS  185 (409)
T ss_pred             HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEE-eccCCCCCcCCHHHHHHhcccCC--EEEEEECCCCCCCC
Confidence            9999999999999999999999999999999999999999 774 4678899999999887655  89999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHH--
Q 015768          180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--  253 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~--  253 (400)
                      +++.+++++|+++|++|++++|+||+|..+.+++.....    ...+++++++||||.|+++|+|+||++.++. +.+  
T Consensus       186 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p-~~~~~  264 (409)
T PLN00143        186 VYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDP-SGLLQ  264 (409)
T ss_pred             ccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCc-hhhhh
Confidence            999999999999999999999999999999886532211    1235789999999999999999999998431 223  


Q ss_pred             ----HHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCC
Q 015768          254 ----ATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLP  327 (400)
Q Consensus       254 ----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~  327 (400)
                          ++.+........ .++.+.|.++..+|+++ .+++++.++.++++++.+.+.|++++... ...|++++|+|++++
T Consensus       265 ~~~~~~~~~~~~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~  343 (409)
T PLN00143        265 ICEIADSIKKALNPAP-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLN  343 (409)
T ss_pred             hHHHHHHHHHHHhccC-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecc
Confidence                333433332222 34788999999999853 46888889999999999999999876533 346778999999997


Q ss_pred             CC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          328 EK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       328 ~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ..    ..+..+++.++++++||.+.||..|+.++++||+++. +++++++++++|+++++++.+
T Consensus       344 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~~al~rl~~~l~~~~~  407 (409)
T PLN00143        344 LLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLEDGLGRLKSFCGRHAK  407 (409)
T ss_pred             hhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHHhcc
Confidence            42    1246677777877899999999999888999999995 899999999999999987765

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=4.9e-49  Score=372.69  Aligned_cols=361  Identities=22%  Similarity=0.317  Sum_probs=305.8

Q ss_pred             HHhhhcCchHHHHHHHHHh-----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            9 KRALETEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      +|+.+...+.+..+.++++     .|++.++|+.|++++++++.+.+++.+.+..  ...|++..|..++|+++++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~   80 (396)
T PRK09147          3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLER   80 (396)
T ss_pred             chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHH
Confidence            4556666667777777764     3679999999999998899999999887653  67798889999999999999998


Q ss_pred             hcC---CCCC-cEEEeCChHHHHHHHHHHhcCC---CCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHH
Q 015768           84 ENK---LYKS-SVMVTAGANQAFVNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWL  155 (400)
Q Consensus        84 ~~~---~~~~-~i~~~~g~t~a~~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l  155 (400)
                      .+|   ++++ +|++|+|+++++..++.++++|   ||.|+++.|+|+.+...++..|++++.+ |.++ ++|.+|++.+
T Consensus        81 ~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-p~~~~~~~~~d~~~l  159 (396)
T PRK09147         81 RYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFL-NCDPANNFAPDFDAV  159 (396)
T ss_pred             HhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEe-ccCccccCccCHHHH
Confidence            877   4554 8999999999999999999999   8999999999999999999999999999 8874 4678999999


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cccc---------cCCCcE
Q 015768          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCC---------VEGDHV  224 (400)
Q Consensus       156 ~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~---------~~~~~~  224 (400)
                      ++.+.+++  +++++++||||||.+++.+++++|+++|++|+++||+||+|..+.+++.  +...         ...+++
T Consensus       160 ~~~~~~~~--k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  237 (396)
T PRK09147        160 PAEVWART--QLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRL  237 (396)
T ss_pred             HHHHhhcc--EEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccE
Confidence            88776544  9999999999999999999999999999999999999999999887652  1110         123688


Q ss_pred             EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ++++||||.++++|+|+||++++   +++++++.......+++++.+.+.++...+.. .+++.+.++.++++++.+.+.
T Consensus       238 i~~~S~SK~~~~~GlRiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  313 (396)
T PRK09147        238 VVFHSLSKRSNVPGLRSGFVAGD---AALLKKFLLYRTYHGCAMPPAVQAASIAAWND-EAHVRENRALYREKFDAVTPI  313 (396)
T ss_pred             EEEeccccccCCccceeeeecCC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998   78888887766555667888899888887764 567888889999999999999


Q ss_pred             hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--------CCeEEEEeccCCHHHHHHHH
Q 015768          305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA  376 (400)
Q Consensus       305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~  376 (400)
                      |++.  +.+..|.+++|+|++++   .+..+++.++++++||.+.||..|+.        .+++||+++. +++++++++
T Consensus       314 L~~~--~~~~~p~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l  387 (396)
T PRK09147        314 LAPV--LDVQLPDAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAA  387 (396)
T ss_pred             HHHh--cCCCCCCeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHH
Confidence            9875  35667888999999998   25678888887788999999987741        4799999997 789999999


Q ss_pred             HHHHHHHH
Q 015768          377 DRLRRGLE  384 (400)
Q Consensus       377 ~~l~~~l~  384 (400)
                      ++|++++.
T Consensus       388 ~rl~~~~~  395 (396)
T PRK09147        388 ERIVDFCR  395 (396)
T ss_pred             HHHHHHhc
Confidence            99998774

>PLN02187 rooty/superroot1

Probab=100.00  E-value=6.7e-49  Score=375.59  Aligned_cols=357  Identities=21%  Similarity=0.317  Sum_probs=300.1

Q ss_pred             CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768           29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (400)
Q Consensus        29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~  102 (400)
                      ++++|+|+.|+++    +.+++++.+++.+.+..+....|++..|..++|+++++++.+.++  +++++|++|+|+++++
T Consensus        65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al  144 (462)
T PLN02187         65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGI  144 (462)
T ss_pred             CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHH
Confidence            5789999999987    456788999999988766566798899999999999999988764  5799999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      ..++.++++|||+|+++.|+|+.+...++..|++++.+ +..+ +++.+|++.+++.+++++  +++++++|+||||.++
T Consensus       145 ~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~l~~~~~~~~d~~~l~~~~~~~~--~~v~i~nP~NPTG~v~  221 (462)
T PLN02187        145 EIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKF-DLLPEKEWEIDLEGIEAIADENT--VAMVVINPNNPCGNVY  221 (462)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-eCccccCCccCHHHHHHhcCCCc--EEEEEeCCCCCCCCcc
Confidence            99999999999999999999999999999999999998 7643 467899999999887665  8999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHH---HH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG---FA  254 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~---~~  254 (400)
                      +.+++++|+++|++||+++|+||+|..+.+++.++...    ...++++++||||.|+++|+|+||++.+++ +.   .+
T Consensus       222 s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p-~~~~~~~  300 (462)
T PLN02187        222 SHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDP-EGVFETT  300 (462)
T ss_pred             CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCc-hhHHHHH
Confidence            99999999999999999999999999988865432111    123589999999999999999999998531 22   33


Q ss_pred             HHHHHhhccCCc--CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCC-
Q 015768          255 TQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEK-  329 (400)
Q Consensus       255 ~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~-  329 (400)
                      +.+.........  +++.+.|.++..+|+. ..+++++.++.++++++.+.+.|++++... +..|.+++|+|++++.. 
T Consensus       301 ~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~  380 (462)
T PLN02187        301 KVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSL  380 (462)
T ss_pred             HHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhh
Confidence            456555544333  4588999999999975 347889999999999999999999987543 34677789999987631 


Q ss_pred             ---CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhccC
Q 015768          330 ---HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG  390 (400)
Q Consensus       330 ---~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~~  390 (400)
                         ..+..+++.++++++||.+.||..|+.++++||+++. +++.+++++++|.++++.+.+..
T Consensus       381 ~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~~~~~  443 (462)
T PLN02187        381 MDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRHAKKT  443 (462)
T ss_pred             CCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhhhcc
Confidence               1245677777878999999999999888999999996 79999999999999998887543

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=1.7e-48  Score=367.41  Aligned_cols=369  Identities=25%  Similarity=0.398  Sum_probs=316.4

Q ss_pred             HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL   87 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~   87 (400)
                      +.|+.+...+.+.++..++...++.++|+.+.+.+++++.+.+++.+.+.+. ...|++..|..++|+++++++.+.+|+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~   84 (387)
T PRK07683          6 NPRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDL   84 (387)
T ss_pred             hHHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence            6788877777777777777667889999999988887888999999888754 567888899999999999999887765


Q ss_pred             --CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768           88 --YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (400)
Q Consensus        88 --~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~  164 (400)
                        +++ +|++|+|+++|+..++.++.++||+|+++.|+|.++...++..|++++.+ +.+++|+.++.+.+++.+.+++ 
T Consensus        85 ~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~~-  162 (387)
T PRK07683         85 HYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFI-DTRSTGFRLTAEALENAITEKT-  162 (387)
T ss_pred             CCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEe-ecCcccCCCCHHHHHHhcCcCc-
Confidence              677 99999999999999999999999999999999999999999999999999 8888888889999999887654 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--c--CCCcEEEEeccccccCCCcce
Q 015768          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--V--EGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~--~~~~~i~~~s~sK~~g~~g~~  240 (400)
                       +++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++.....  .  ..+++++++|+||.+|++|+|
T Consensus       163 -~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlR  241 (387)
T PRK07683        163 -RCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWR  241 (387)
T ss_pred             -eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccce
Confidence             99999999999999999999999999999999999999999998775432211  1  245789999999999999999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  320 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  320 (400)
                      +||++.+   +++++++.........+++.+.|.++..+|..+..+.++.++.++++++.+.+.|++.+ +.+..+.+++
T Consensus       242 iG~i~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~  317 (387)
T PRK07683        242 IGFLFAP---SYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGAF  317 (387)
T ss_pred             eEEEEcC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCeeE
Confidence            9999999   78888887665433455677889999999987667777888889999999999998875 4677788899


Q ss_pred             EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      |+|+.++....+..+++.++++++||.+.||..|+.  ++++||+++. +++++.+++++|.+++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~  383 (387)
T PRK07683        318 YLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQ  383 (387)
T ss_pred             EEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence            999998753335677887777789999999998863  5899999997 899999999999998865

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=5.6e-49  Score=370.36  Aligned_cols=359  Identities=23%  Similarity=0.385  Sum_probs=305.4

Q ss_pred             HHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC-cEEEe
Q 015768           19 MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVT   95 (400)
Q Consensus        19 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~-~i~~~   95 (400)
                      +.++.+..++.++.|+|+.|++++++++.+.+++.+.+... ...|++..|.+++|+++++++.+.+|+  +++ +|++|
T Consensus         9 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t   87 (378)
T PRK07682          9 IRKFFDLAANMEGVISLGVGEPDFVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVT   87 (378)
T ss_pred             HHHHHHHHHhcCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe
Confidence            33444444444689999999999988888888888877643 567988899999999999999988765  454 79999


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG  174 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~  174 (400)
                      +|+++++..++.++++|||+|++++|+|+.+...++..|.+++.+ +.+. +++.+|++++++.+.+++  +++++++|+
T Consensus        88 ~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~  164 (378)
T PRK07682         88 VGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPV-ATTLENEFKVQPAQIEAAITAKT--KAILLCSPN  164 (378)
T ss_pred             CChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHhhcCccc--EEEEEECCC
Confidence            999999999999999999999999999999999999999999888 7753 356789999999887654  999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  250 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~  250 (400)
                      ||||.+++.+++++|+++|++|++++|+||+|..+.+++....  ..  ..+++++++||||.+|++|+|+||++.+   
T Consensus       165 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~---  241 (378)
T PRK07682        165 NPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP---  241 (378)
T ss_pred             CCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC---
Confidence            9999999999999999999999999999999999988653211  11  2367899999999999999999999998   


Q ss_pred             HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC
Q 015768          251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH  330 (400)
Q Consensus       251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  330 (400)
                      +++++.+........++++.+.|.++..+|+.+..+.+++++.++++++.+.+.|++++. .+..|.+++|+|+.++...
T Consensus       242 ~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~g~~~~~~~~~~~~  320 (378)
T PRK07682        242 VYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGL-TCHVPGGAFYAFPSISSTG  320 (378)
T ss_pred             HHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCeeEEEEEeccCCC
Confidence            789998877665555678899999999999876677888889999999999999999854 7777888999999886433


Q ss_pred             CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          331 LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       331 ~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+..+++.++++++||.+.||..|+.  ++++|||++. +++++++++++|+++++++
T Consensus       321 ~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        321 LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence            46788988887788999999998863  6899999997 8999999999999988753

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.3e-49  Score=370.87  Aligned_cols=371  Identities=26%  Similarity=0.439  Sum_probs=318.9

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      +++|+.+.....+.++.+..+..+++++|+.+++++++++.+.+++.+.+... ...|++..|.+++|+++++++.+.+|
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g   88 (391)
T PRK08361         10 IAGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYG   88 (391)
T ss_pred             hhHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            57888877777778877776666789999999999988889999988887654 45688889999999999999987765


Q ss_pred             --CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCC
Q 015768           87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKP  163 (400)
Q Consensus        87 --~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~  163 (400)
                        +++++|++|+|+++++..++.+++++||+|++++|+|.++...++..|.+++.+ |.+++ ++.+|++++++.+++++
T Consensus        89 ~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~  167 (391)
T PRK08361         89 VDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRI-PLREENEFQPDPDELLELITKRT  167 (391)
T ss_pred             CCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhccccc
Confidence              568999999999999999999999999999999999999999999999999999 88765 46789999999988665


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcce
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~  240 (400)
                        +++++++|+||||.++|.+++++|+++|+++++++|+||+|..+.+.+....   ....+++++++|+||.+|++|+|
T Consensus       168 --~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR  245 (391)
T PRK08361        168 --RMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWR  245 (391)
T ss_pred             --EEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhh
Confidence              8999999999999999999999999999999999999999998877543221   12346889999999999999999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +||++++   +++++.+.........+.+.+.+.++..+|+.+.  ++.++.++.++++++.+.+.|++++++.+..|++
T Consensus       246 iG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g  322 (391)
T PRK08361        246 LGFVIAP---EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKG  322 (391)
T ss_pred             hhhhccC---HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCE
Confidence            9999998   7888888776655566778899999999998644  4678888889999999999999886677888888


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++|+|++++....+..+++.++++++||.+.||..|+.  ++++||+++. +++++++++++|++++++
T Consensus       323 ~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        323 AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE  390 (391)
T ss_pred             EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence            99999999853346888988887778999999998864  5799999996 888999999999998864

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=2.2e-48  Score=368.43  Aligned_cols=373  Identities=23%  Similarity=0.350  Sum_probs=308.8

Q ss_pred             HHHhhhcCchHHHHHHHHHh----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            8 AKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      ++|+.+.....+.++.++.+    .++++++|+.+++++++++.+++++.+.+.......|++..|..++|+++++++.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~   83 (405)
T PRK09148          4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYAR   83 (405)
T ss_pred             hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHH
Confidence            45666555555666555543    46889999999999888899999988887655467898888999999999999988


Q ss_pred             hcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768           84 ENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE  160 (400)
Q Consensus        84 ~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~  160 (400)
                      .+|+  +++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+ |.++++.  .++.+++.++
T Consensus        84 ~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~--~~~~l~~~~~  160 (405)
T PRK09148         84 RFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSV-PAEPDEE--FFPALERAVR  160 (405)
T ss_pred             HhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEE-eCCCCCC--CccCHHHHHh
Confidence            7664  566 89999999999999999999999999999999999999999999999999 8765542  2344555443


Q ss_pred             c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEecccccc
Q 015768          161 T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAY  234 (400)
Q Consensus       161 ~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~  234 (400)
                      . ...++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.+...   .  ..+.+++++||||.+
T Consensus       161 ~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~  240 (405)
T PRK09148        161 HSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF  240 (405)
T ss_pred             hccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc
Confidence            1 123489999999999999999999999999999999999999999998875532211   1  134678899999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      |++|+|+||++.+   +++++.+.......+++++.+.|.++..+|+...+++++.++.++++++.+.+.|++++. .+.
T Consensus       241 ~~pGlR~G~~v~~---~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~  316 (405)
T PRK09148        241 SMAGWRMGFAVGN---ERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGW-DIP  316 (405)
T ss_pred             CCcchheeeeeCC---HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccC
Confidence            9999999999998   889999988776667778899999999999865677888899999999999999998764 666


Q ss_pred             CCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          315 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .|.+++|+|++++...  .+..+++.++++++||.+.||..|+.  ++++||+++. +.+.+.+++++|.+++..+.+
T Consensus       317 ~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~-~~~~l~~al~~l~~~l~~~~~  393 (405)
T PRK09148        317 PPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVE-NEQRIRQAARNIKRFLSSADE  393 (405)
T ss_pred             CCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHHHH
Confidence            7888999999997532  23578888887789999999998864  5799999984 899999999999999988765

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.4e-48  Score=367.34  Aligned_cols=373  Identities=24%  Similarity=0.394  Sum_probs=305.6

Q ss_pred             HHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      ++++.+...+.+..+.++.    +.++++++|+.|+++...|+.+++++.+.........|++..|...+|+++++++.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~   86 (403)
T PRK08636          7 FNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR   86 (403)
T ss_pred             HHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence            4555555555555444433    346789999999988877788888887776554467898889999999999999988


Q ss_pred             hcC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHH----
Q 015768           84 ENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL----  155 (400)
Q Consensus        84 ~~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l----  155 (400)
                      .+|  ++++ +|++|+|+++++..++.++++|||+|++++|+|+.+...++..|++++.+ |.+ ++++.+|.+.+    
T Consensus        87 ~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l  165 (403)
T PRK08636         87 KYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKM-PLEYNEDFELDEDQFFENL  165 (403)
T ss_pred             HhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-eccccccCccChhhhhhHH
Confidence            877  4566 79999999999999999999999999999999999999999999999999 875 34467787754    


Q ss_pred             HHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC--CCcEEEEec
Q 015768          156 EKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE--GDHVVNLFS  229 (400)
Q Consensus       156 ~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~--~~~~i~~~s  229 (400)
                      ++.++. ....+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++.+..   ...  .+.+++++|
T Consensus       166 ~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S  245 (403)
T PRK08636        166 EKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYT  245 (403)
T ss_pred             HHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEe
Confidence            555542 22358999999999999999999999999999999999999999999987653221   121  246778999


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      +||.+|++|+|+||++.+   +++++.+........++++.+.+.++..+++...++++++++.++++++.+.+.|++.+
T Consensus       246 ~SK~~~~~GlRiG~iv~~---~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  322 (403)
T PRK08636        246 LSKSYNMAGWRVGFVVGN---KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAG  322 (403)
T ss_pred             cccccCCccceeeeeeCC---HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999999999998   78888888776544566777888888877765567888888999999999999999875


Q ss_pred             CCcccCCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          310 EGAVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                       +.+..|.+++|+|++++...  .+..+++..+++++||.+.||..|+.  ++++||+++ .+++++++++++|+++++.
T Consensus       323 -~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~~  400 (403)
T PRK08636        323 -WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLKE  400 (403)
T ss_pred             -CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence             47777888999999998642  24678888877789999999998864  579999999 5999999999999999976


Q ss_pred             H
Q 015768          386 L  386 (400)
Q Consensus       386 ~  386 (400)
                      +
T Consensus       401 ~  401 (403)
T PRK08636        401 L  401 (403)
T ss_pred             h
Confidence            3

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=2.3e-48  Score=367.31  Aligned_cols=371  Identities=27%  Similarity=0.427  Sum_probs=309.6

Q ss_pred             hhHHHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |++++|+.......+..+.+..    +.++++++|+.+.+++++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   79 (388)
T PRK07337          1 MRLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAW   79 (388)
T ss_pred             CchhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            4677887765555444444333    356889999999999988899999998887654 56798888999999999999


Q ss_pred             HHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768           81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (400)
Q Consensus        81 l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~  157 (400)
                      +.+.+|  +++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++++++
T Consensus        80 ~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~l~~  158 (388)
T PRK07337         80 YARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLV-PSGPAERFQLTAADVEA  158 (388)
T ss_pred             HHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCcCCHHHHHh
Confidence            988776  478999999999999999999999999999999999999999999999999999 8875 457889999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCC
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~  236 (400)
                      .+.+++  ++|++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+.+..... ...+++++++|+||.+|+
T Consensus       159 ~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~  236 (388)
T PRK07337        159 AWGERT--RGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNM  236 (388)
T ss_pred             hcCccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCC
Confidence            887665  89999999999999999999999999999999999999999988775432211 124667889999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      +|+|+||++++   +++++++.........+.+.+.|.++..++..+ .++..+.++.++++++.+.+.|++++......
T Consensus       237 ~G~RiG~~~~~---~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~  313 (388)
T PRK07337        237 TGWRLGWLVVP---EALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVM  313 (388)
T ss_pred             chhheeeeecC---HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence            99999999998   788888887766556678899999999998753 24567778888999999999999876422346


Q ss_pred             CCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       316 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      |.+++|+|++++..    ..+..+++.++++++||.+.||..|+.   ++++|++++. +++++++++++|.+++
T Consensus       314 p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        314 PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF  387 (388)
T ss_pred             CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence            77899999999752    135778888887789999999998864   5799999997 7999999999998765

>PRK07324 transaminase; Validated

Probab=100.00  E-value=1.8e-49  Score=371.80  Aligned_cols=348  Identities=22%  Similarity=0.290  Sum_probs=302.8

Q ss_pred             HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        26 ~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      -..++++++|+.|++++..|+.+ +++.+++.+. ...|++..|.+++|+++++++.   ++++++|++|+|+++++..+
T Consensus        22 ~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~---~~~~~~vi~t~G~~~al~~~   96 (373)
T PRK07324         22 DIAESCIDSLTLEELLALAGKNP-EAFYQELGQK-KLTYGWIEGSPEFKEAVASLYQ---NVKPENILQTNGATGANFLV   96 (373)
T ss_pred             ccccCCCCCCcHHHHHhccCcch-HHHHHHHhcC-CccCCCCCCCHHHHHHHHHHhc---CCChhhEEEcCChHHHHHHH
Confidence            35578999999999998878877 8888777665 4589988999999999999885   46789999999999999999


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      +.+++++||+|+++.|+|..+...++..|++++.+ |.++ +++.+|++.+++.+++++  |++++++|+||||.+++.+
T Consensus        97 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~~--kli~i~~p~NPtG~~~~~~  173 (373)
T PRK07324         97 LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYW-QLKEENGWLPDLDELRRLVRPNT--KLICINNANNPTGALMDRA  173 (373)
T ss_pred             HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHhCCCCC--cEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999 8875 467789999999887665  9999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      ++++|+++|++||+++|+||+|..+.+++.... ....++.++++|+||.+|++|+|+||++++   +++++++.+....
T Consensus       174 ~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~---~~li~~~~~~~~~  250 (373)
T PRK07324        174 YLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN---EEVIDILRKYRDY  250 (373)
T ss_pred             HHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecC---HHHHHHHHHHhCc
Confidence            999999999999999999999998877542111 122457899999999999999999999997   8999999988876


Q ss_pred             CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768          264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                      .+.+++.+.+.++..+++..+.+++++++.++++++.+.+.|++.+.+.+..|.++++.|+.++.. .+..+++.+++++
T Consensus       251 ~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~-~~~~~~~~~ll~~  329 (373)
T PRK07324        251 TMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD-MPSEDFCLKLLKE  329 (373)
T ss_pred             EEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC-CCHHHHHHHHHHh
Confidence            677888899999988887645667788888889999999999888666778888888888888653 3678899998888


Q ss_pred             cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +||.+.||..|+.++++||+++. +++.+.+++++|+++++++
T Consensus       330 ~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~  371 (373)
T PRK07324        330 TGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF  371 (373)
T ss_pred             cCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence            99999999999888999999996 7999999999999999764

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=4.4e-48  Score=367.68  Aligned_cols=355  Identities=21%  Similarity=0.293  Sum_probs=300.1

Q ss_pred             CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768           29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (400)
Q Consensus        29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~  102 (400)
                      +.++|+|+.|+|.    +++++++.+++.+++..+....|++..|.+++|+++++++.+.++  +++++|++|+|+++++
T Consensus        51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al  130 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI  130 (430)
T ss_pred             CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence            6799999999975    677899999999988765556798889999999999999988765  4689999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      ..++.++.+|||+|+++.|+|+.+.......|++++.+ +.. ++++.+|++.+++++++++  +++++++|+||||.++
T Consensus       131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~P~NPtG~v~  207 (430)
T PLN00145        131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHF-DLLPERGWEVDLEGVEALADENT--VAMVIINPNNPCGSVY  207 (430)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-eCCcccCCcCCHHHHHHHhCcCc--eEEEEeCCCCCCCCCC
Confidence            99999999999999999999999998889999999988 654 4568899999999888766  9999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH---
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA---  254 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~---  254 (400)
                      +.+++++|+++|+++|+++|+||+|..+.+++.++..    ....++++++|+||.|+++|+|+||++.+++ +.++   
T Consensus       208 ~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~-~~~~~~~  286 (430)
T PLN00145        208 SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDP-NGILKET  286 (430)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecc-hhhhhhh
Confidence            9999999999999999999999999998886533222    1245789999999999999999999987431 2332   


Q ss_pred             ---HHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCC
Q 015768          255 ---TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK  329 (400)
Q Consensus       255 ---~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~  329 (400)
                         +.+..... ...+++.+.|.++..+|+. ..+++++.++.++++++.+.+.|++++++.+ ..|.+++|+|++++..
T Consensus       287 ~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~  365 (430)
T PLN00145        287 KVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLS  365 (430)
T ss_pred             HHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChh
Confidence               23333332 2335678999999999986 3478889999999999999999999866554 4688899999998742


Q ss_pred             ----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          330 ----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       330 ----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                          ..+..+++.++++++||.+.||..|+.++++||+++. +.+++++++++|++++.++.+.
T Consensus       366 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~~~~  428 (430)
T PLN00145        366 CLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRHAKL  428 (430)
T ss_pred             hcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhccc
Confidence                1256778888888899999999999989999999995 8999999999999999887653

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=3.1e-48  Score=368.47  Aligned_cols=375  Identities=19%  Similarity=0.274  Sum_probs=309.1

Q ss_pred             HHHhhhcCchHHHHHHHHH--hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 015768            8 AKRALETEMPIMVQIQELV--RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL   81 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l   81 (400)
                      ++|+.+...+.-..+..++  ..++++++|+.|.++    +.+++.+.+++.+.+.......|++..|..++|+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~   88 (412)
T PTZ00433          9 SKHAGRVFNPLRTVTDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYW   88 (412)
T ss_pred             cHHHHhhhccHHHHHHhhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHH
Confidence            4455544444444444444  478999999999976    4578899999988877654678988889999999999999


Q ss_pred             HhhcC--------CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCH
Q 015768           82 NQENK--------LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDA  152 (400)
Q Consensus        82 ~~~~~--------~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~  152 (400)
                      .+.++        +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ |.++ +++.+|+
T Consensus        89 ~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~  167 (412)
T PTZ00433         89 RNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFY-NCRPEKDWEADL  167 (412)
T ss_pred             HhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEE-ecCccccCcCCH
Confidence            87643        678999999999999999999999999999999999999999999999999999 8764 3567899


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc-CCCcEEEEe
Q 015768          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV-EGDHVVNLF  228 (400)
Q Consensus       153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~-~~~~~i~~~  228 (400)
                      +.+++.+++++  ++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++....   .. .....++++
T Consensus       168 ~~l~~~~~~~~--~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~  245 (412)
T PTZ00433        168 DEIRRLVDDRT--KALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILG  245 (412)
T ss_pred             HHHHHHhccCc--eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEc
Confidence            99999887654  9999999999999999999999999999999999999999999887653221   11 123578999


Q ss_pred             ccccccCCCcceeEEEEccC--C-cHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMGWRVGYIAYPS--E-VEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~--~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ||||.+|++|+|+||++..+  . .+++++.+..... ..++++.+.|.++..++... ..++++.++.++++++.+.+.
T Consensus       246 SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~  324 (412)
T PTZ00433        246 GTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNH  324 (412)
T ss_pred             cchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998621  1 1456676666543 23578999999999999763 477888889999999999999


Q ss_pred             hccCCCCcccCCCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          305 LSPLGEGAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       305 L~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      |+++.++.+..|.+++|+|++++..    ..+..++++.+++++||.+.||..|+.++++|++++. .++++++++++|.
T Consensus       325 L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~al~~l~  403 (412)
T PTZ00433        325 IGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREAVERIK  403 (412)
T ss_pred             HhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence            9986555777888899999998742    1246788888886789999999999888999999996 7899999999999


Q ss_pred             HHHHHHh
Q 015768          381 RGLEELV  387 (400)
Q Consensus       381 ~~l~~~~  387 (400)
                      ++++...
T Consensus       404 ~~~~~~~  410 (412)
T PTZ00433        404 AFCERHK  410 (412)
T ss_pred             HHHHHhc
Confidence            9998765

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.5e-48  Score=366.41  Aligned_cols=369  Identities=21%  Similarity=0.319  Sum_probs=304.1

Q ss_pred             hhHHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      +..++++.......+.++.+    .-+.|++.++|+.++++.++|+++++++.+.+.......|++..|.+++|++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~   85 (394)
T PRK05942          6 ITPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDW   85 (394)
T ss_pred             cchhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHH
Confidence            34566665544433433332    23457789999999888777778888887777554457898889999999999999


Q ss_pred             HHhhcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHH
Q 015768           81 LNQENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLE  156 (400)
Q Consensus        81 l~~~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~  156 (400)
                      +.+.+|+  +++ ++++|+|+++++..++.+++++||+|++++|+|+++...++..|++++.+ |.+. +++.+|+++++
T Consensus        86 ~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~  164 (394)
T PRK05942         86 YHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPI-ILKPENDWLIDLSSIP  164 (394)
T ss_pred             HHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEe-ecCCccCCccCHHHHH
Confidence            9988764  566 58899999999999999999999999999999999998889999999999 8874 46789999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cC--CCcEEEEeccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VE--GDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~--~~~~i~~~s~s  231 (400)
                      +.+.+++  +++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.....   ..  .+.+++++|||
T Consensus       165 ~~~~~~~--k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfS  242 (394)
T PRK05942        165 EEVAQQA--KILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLS  242 (394)
T ss_pred             Hhccccc--eEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecch
Confidence            9887654  99999999999999999999999999999999999999999988875432211   11  34678899999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.||++|+|+||++.+   +++++++........++.+.+.+.++..+++...++.++.++.++++++.+.+.|++.+. 
T Consensus       243 K~~~~~GlRiG~i~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-  318 (394)
T PRK05942        243 KTYNMAGWRVGFVVGN---RHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGW-  318 (394)
T ss_pred             hccCChhhheeeeecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence            9999999999999998   889999987776556778888999999999765577888889999999999999988754 


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      .+..+.+++|+|++++... +..++..++++++||.+.||..|+  .++++|++++. +.+.+.+++++|.++
T Consensus       319 ~~~~~~~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~  389 (394)
T PRK05942        319 NIPPTKATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA  389 (394)
T ss_pred             eecCCCeeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence            6777888899999998543 567788777778999999999885  36899999985 678888888887664

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=4.5e-48  Score=366.76  Aligned_cols=357  Identities=20%  Similarity=0.279  Sum_probs=302.4

Q ss_pred             hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~  100 (400)
                      +.++++|+|+.|+|+    +++|+.+++++.+++.......|++..|.+++|+++++++.+.+|  +++++|++|+|+++
T Consensus        28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~  107 (409)
T PLN02656         28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ  107 (409)
T ss_pred             ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence            467899999999987    788999999999988776567898889999999999999988765  56899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (400)
Q Consensus       101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~  179 (400)
                      ++..++.+++++||+|++++|+|+.+....+..|++++.+ |.+ ++++.+|++.+++.+++++  +++++++|+||||.
T Consensus       108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~P~NPtG~  184 (409)
T PLN02656        108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYV-DLLPEKGWEVDLDAVEALADQNT--VALVIINPGNPCGN  184 (409)
T ss_pred             HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEE-eCCCcCCCCCCHHHHHHHhccCc--eEEEEECCCCCCCC
Confidence            9999999999999999999999999988888899999999 875 4577899999999887665  89999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCC-----c
Q 015768          180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----V  250 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~-----~  250 (400)
                      +++.+++++|+++|++||+++|+||+|..+.+++.....    ....++++++||||.|+++|+|+||++.+++     .
T Consensus       185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~  264 (409)
T PLN02656        185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRD  264 (409)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCccccccc
Confidence            999999999999999999999999999999886533211    1235789999999999899999999998531     1


Q ss_pred             HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCC
Q 015768          251 EGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPE  328 (400)
Q Consensus       251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~  328 (400)
                      +++++++...... ..+++.+.|.++..+|++. .+++++.++.++++++.+.+.|+.++... +..|.+++|+|++++.
T Consensus       265 ~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~  343 (409)
T PLN02656        265 PKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNL  343 (409)
T ss_pred             HHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecch
Confidence            4677777765442 2357889999999999853 46788889999999999999999876533 3568889999999863


Q ss_pred             C----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          329 K----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       329 ~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .    ..+..+++.++++++||.+.||..|+.++++||+++. +++++++++++|++++.....
T Consensus       344 ~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~~~~~~~~~  406 (409)
T PLN02656        344 SLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIKSFYLRHSK  406 (409)
T ss_pred             hhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhcc
Confidence            2    1134566666777899999999999888999999996 899999999999999886653

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=7e-48  Score=362.89  Aligned_cols=362  Identities=23%  Similarity=0.344  Sum_probs=302.6

Q ss_pred             HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC
Q 015768            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY   88 (400)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~   88 (400)
                      +++.....+.+.. ......++++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++++++++++++.+|++
T Consensus         9 ~~~~~~~~~~~~~-~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~   86 (384)
T PRK12414          9 SKLPDVGTTIFTV-IGQLAAQHDALNLSQGAPNFAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGAR   86 (384)
T ss_pred             HhcccCCccHHHH-HHHHHHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCC
Confidence            3343333443333 3333566889999999999988999999998877654 4679888999999999999999988874


Q ss_pred             --C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768           89 --K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (400)
Q Consensus        89 --~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~  165 (400)
                        + +++++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+ |.+++++.+|++.+++.+++++  
T Consensus        87 ~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~--  163 (384)
T PRK12414         87 YDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAI-KLSPEDFRVNWDEVAAAITPRT--  163 (384)
T ss_pred             CCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEE-ecCccccccCHHHHHhhcCccc--
Confidence              3 689999999999999999999999999999999999999999999999999 8877677889999999887654  


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-----CCCcEEEEeccccccCCCcce
Q 015768          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~g~~  240 (400)
                      ++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++......     ..+++++++||||.+|++|+|
T Consensus       164 ~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlR  243 (384)
T PRK12414        164 RMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWR  243 (384)
T ss_pred             EEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccce
Confidence            999999999999999999999999999999999999999999988765322111     135789999999999999999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  320 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  320 (400)
                      +||++.+   +++++.+........++++.+.|.++..+|+.+.. ..+.++.++++++.+.+.|++.+ +.+..+.+++
T Consensus       244 iG~~v~~---~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~  318 (384)
T PRK12414        244 VGYCLAP---AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS-YLGLGAFYQRKRDLLARELAGSR-FELLPSEGSF  318 (384)
T ss_pred             EEEEecC---HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChH-HHHHHHHHHHHHHHHHHHHHhCC-CeecCCCcce
Confidence            9999999   78888888877666778899999999999986443 34677888999999999999986 4777788899


Q ss_pred             EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          321 YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       321 ~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      |+|++++.. ..+..+++.++++++||.+.||..|+.    .+++||+++. +++++++++++|.+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~  383 (384)
T PRK12414        319 FMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS  383 (384)
T ss_pred             EEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence            999988642 124567776777789999999998852    4799999997 89999999999864

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-47  Score=363.64  Aligned_cols=374  Identities=29%  Similarity=0.462  Sum_probs=318.9

Q ss_pred             hhHHHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |++|+|+.+...+.+.++.++.    ..+++.++|+.+++++++++++.+++.+.+.+. ...|++..|...+|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   80 (393)
T PRK05764          2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDG-KTKYTPAAGIPELREAIAAK   80 (393)
T ss_pred             cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCChHHHHHHHHHH
Confidence            5689999987777765555544    346789999999999988899999998888654 44698888999999999999


Q ss_pred             HHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768           81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (400)
Q Consensus        81 l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~  157 (400)
                      +.+.+|  ++++++++|+|+++++..++.+++++||+|++++|+|..+..+++..|.+++.+ |.++ +++.+|++.+++
T Consensus        81 ~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~  159 (393)
T PRK05764         81 LKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFV-PTGEENGFKLTVEQLEA  159 (393)
T ss_pred             HHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEE-ecCcccCCcCCHHHHHH
Confidence            988765  568999999999999999999999999999999999999999999999999999 8774 467889999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---cc---ccCCCcEEEEeccc
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HC---CVEGDHVVNLFSFS  231 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~---~~~~~~~i~~~s~s  231 (400)
                      .+.+++  +++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++..   ..   ....+++++++|+|
T Consensus       160 ~l~~~~--~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S  237 (393)
T PRK05764        160 AITPKT--KALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFS  237 (393)
T ss_pred             hhCccc--eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCc
Confidence            987654  89999999999999999999999999999999999999999988775432   11   12245889999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.+|++|+|+||++.+   +++++++.........+++.+.+.++..+++...+++.+.++.+.++++.+.+.|++++++
T Consensus       238 K~~~~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~  314 (393)
T PRK05764        238 KAYAMTGWRLGYAAGP---KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGL  314 (393)
T ss_pred             ccccCccceeEEEecC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            9999999999999988   7888888877765667788999999999997445777888888999999999999998556


Q ss_pred             cccCCCCceEEEeeCCCCCC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+..|.+++++|++++....    +..++...+++++||.+.||..|..++++|++++. +++++++++++|.+++++.
T Consensus       315 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~-~~~~~~~~i~~l~~~~~~~  392 (393)
T PRK05764        315 ECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT-SLEDLEEGLERIERFLESL  392 (393)
T ss_pred             cccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            77788888999999875421    24788888877889999999988778999999996 8999999999999998753

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=3e-49  Score=349.14  Aligned_cols=366  Identities=33%  Similarity=0.541  Sum_probs=314.5

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      .++++.......|..+.++.+.....-.|++|++++++|.-|.+++..+.+.+....|....|.+++++++++.++..+|
T Consensus         8 ~~~~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~   87 (420)
T KOG0257|consen    8 RNRNLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYG   87 (420)
T ss_pred             ccccccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhc
Confidence            34555566667888888876664443339999999999999999999999988788899999999999999999999765


Q ss_pred             C---CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-------CCCCCCCHHHHH
Q 015768           87 L---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-------SKTLHPDADWLE  156 (400)
Q Consensus        87 ~---~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~e~l~  156 (400)
                      .   +.++|++|.|+.+++..++.+++++||+|++.+|.|..+...++..|..++++ |..       ...|.+|.+.++
T Consensus        88 ~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v-~~~~~~g~~~s~~~~~D~~~le  166 (420)
T KOG0257|consen   88 GLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFV-PLKPKEGNVSSSDWTLDPEELE  166 (420)
T ss_pred             cccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceee-ccccccccccCccccCChHHHH
Confidence            3   46789999999999999999999999999999999999999999999999999 776       456889999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-----cCCCcEEEEeccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-----VEGDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-----~~~~~~i~~~s~s  231 (400)
                      ..+++++  |+|++++||||||.+++.++|++|+++|++||+++|+||+|..+.+++..+..     ..+.+.+.++|++
T Consensus       167 ~~~t~kT--k~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~g  244 (420)
T KOG0257|consen  167 SKITEKT--KAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFG  244 (420)
T ss_pred             hhccCCc--cEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEecccc
Confidence            9999988  99999999999999999999999999999999999999999999998864332     2356899999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--------HHHHHHHHHHHHHHHHHHH
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--------EWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~l~~  303 (400)
                      |.+|+.|||+||++++   +.+...+........+..+++.|.|.+.+++...        .+..++.+.++++++.|.+
T Consensus       245 Ktf~~TGWrlGW~igp---~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k  321 (420)
T KOG0257|consen  245 KTFGVTGWRLGWAIGP---KHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAK  321 (420)
T ss_pred             ceeeeeeeeeeeeech---HHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997   8899999999988899999999999999888644        3445588999999999999


Q ss_pred             HhccCCCCcccCCCCceEEEeeCCC--------CC---CCHHHHHHHHHHhcCeEEeCCCccCCCC-------eEEEEec
Q 015768          304 ALSPLGEGAVKGGEGAIYLWARLPE--------KH---LDDFEVVRWLAHRHGVVVIPGGACGCRG-------HLRISFG  365 (400)
Q Consensus       304 ~L~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~l~~~~gi~v~~g~~~~~~~-------~iRi~~~  365 (400)
                      .|++++. +++.|++++|+|++++.        ..   .++-.++.|++++.|+.+.|++.|+.+.       .+|++++
T Consensus       322 ~L~~lg~-~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~  400 (420)
T KOG0257|consen  322 ALEELGL-KVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC  400 (420)
T ss_pred             HHHhcCC-ccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH
Confidence            9999965 99999999999999881        11   1355688899999999999999998654       5666666


Q ss_pred             cCCHHHHHHHHHHHH
Q 015768          366 GLVEDDCKAAADRLR  380 (400)
Q Consensus       366 ~~~~~~~~~~~~~l~  380 (400)
                      . +++-++.+.++|+
T Consensus       401 k-~~~~L~~a~e~l~  414 (420)
T KOG0257|consen  401 K-ADETLRKAIERLK  414 (420)
T ss_pred             h-hHHHHHHHHHHHh
Confidence            5 5665666655555

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=3.6e-48  Score=365.33  Aligned_cols=365  Identities=24%  Similarity=0.374  Sum_probs=311.8

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      +++|++....+.+..+.++.+ +.++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++++++++++.+.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~   85 (386)
T PRK09082          8 PQSKLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYG   85 (386)
T ss_pred             hhhHhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            566776666666666665544 4689999999999988889999998887654 46798889999999999999998887


Q ss_pred             CC--C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768           87 LY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (400)
Q Consensus        87 ~~--~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~  163 (400)
                      .+  + +++++|+|+++++..++.+++++||+|+++.|+|.++...++..|.+++.+ +.+++++.+|++++++.+++++
T Consensus        86 ~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~  164 (386)
T PRK09082         86 RQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRV-ALQPPDFRVDWQRFAAAISPRT  164 (386)
T ss_pred             CCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccccCCHHHHHHhcCccc
Confidence            64  3 379999999999999999999999999999999999999999999999999 8876678899999999987654


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCc
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g  238 (400)
                        +++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++.....   .  ..+++++++||||.+|++|
T Consensus       165 --~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G  242 (386)
T PRK09082        165 --RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG  242 (386)
T ss_pred             --eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh
Confidence              99999999999999999999999999999999999999999988875432111   1  2468899999999999999


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +|+||++++   +++++.+........++++.+.|.++..+++...++.++.++.++++++.+.+.|++.+ +.+..+.+
T Consensus       243 ~RiG~iv~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~g  318 (386)
T PRK09082        243 WKVGYCVAP---AALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-FKLLPCEG  318 (386)
T ss_pred             hhhhhhhCC---HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCe
Confidence            999999998   78999888877666778899999999999875567788888999999999999999865 47777888


Q ss_pred             ceEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       319 ~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      ++|+|+++++ ...+..+++.+|++++||.+.||..|+.    .+++|++++. +++++++++++|++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~  385 (386)
T PRK09082        319 TYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ  385 (386)
T ss_pred             eEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence            9999999874 2246788999888889999999997742    4799999997 89999999999875

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=7e-48  Score=375.04  Aligned_cols=374  Identities=19%  Similarity=0.331  Sum_probs=301.6

Q ss_pred             hhHHHHhhhcCchH----HHHHHHHHhcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015768            5 AKLAKRALETEMPI----MVQIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL   77 (400)
Q Consensus         5 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~   77 (400)
                      |+.|+|+.+...+.    .....++-+.|+++|+|+.|++   ++++|+.+++++.+.+..  ...|++..|..++|+++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReai  194 (517)
T PRK13355        117 FKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAI  194 (517)
T ss_pred             CChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHH
Confidence            45788877655433    2333444567889999999987   466799999999888764  45799899999999999


Q ss_pred             HHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHH
Q 015768           78 VKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADW  154 (400)
Q Consensus        78 a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~  154 (400)
                      ++++.++++  +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+++ +|.+|+++
T Consensus       195 a~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~-~~~~~~~~~~d~~~  273 (517)
T PRK13355        195 MQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHY-RCDEQSEWYPDIDD  273 (517)
T ss_pred             HHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEe-ecCcccCCCCCHHH
Confidence            999987763  678999999999999999999999999999999999999999999999999999 77654 58899999


Q ss_pred             HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCC-cEEEEecc
Q 015768          155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGD-HVVNLFSF  230 (400)
Q Consensus       155 l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~-~~i~~~s~  230 (400)
                      +++.+.+++  ++|++++||||||.+++.+++++|+++|++||++||+||+|..+.+++..+..   ...+ .+++++||
T Consensus       274 l~~~~~~~~--k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~  351 (517)
T PRK13355        274 IRSKITSRT--KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGL  351 (517)
T ss_pred             HHHhcCcCc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecc
Confidence            999987766  99999999999999999999999999999999999999999999886533221   1122 35678999


Q ss_pred             ccccCCCcceeEEEEccCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC---cHHHHHHHHHHHHHHHHHHH
Q 015768          231 SKAYGMMGWRVGYIAYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~  303 (400)
                      ||.++++|+|+||++.+.+ ++    +++.+.... ...++.+.+.|.++..+|...   .+++.+. .++.++++.+.+
T Consensus       352 SK~~~~~G~RiG~~i~~~~-~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~  428 (517)
T PRK13355        352 SKSHMIAGYRIGWMILSGN-KRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYN  428 (517)
T ss_pred             hhhccCcccceEEEEeeCc-hhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHH
Confidence            9999999999999985421 33    344443332 233567889999999999742   2344333 345566889999


Q ss_pred             HhccCCCCcccCCCCceEEEeeCCCC---CCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHH
Q 015768          304 ALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADR  378 (400)
Q Consensus       304 ~L~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~  378 (400)
                      .|++++++.+..|++++|+|++++..   ..+..+++..+++++||.+.||..|+  .++++||+++ .+++++++++++
T Consensus       429 ~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~r  507 (517)
T PRK13355        429 ALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMDR  507 (517)
T ss_pred             HHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHHH
Confidence            99998667888899999999998742   12456777777789999999999986  4789999997 489999999999


Q ss_pred             HHHHHHHHh
Q 015768          379 LRRGLEELV  387 (400)
Q Consensus       379 l~~~l~~~~  387 (400)
                      |+++++.+.
T Consensus       508 l~~~~~~~~  516 (517)
T PRK13355        508 LADFFSYYR  516 (517)
T ss_pred             HHHHHHHhh
Confidence            999998653

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=8.7e-48  Score=363.23  Aligned_cols=368  Identities=24%  Similarity=0.369  Sum_probs=311.5

Q ss_pred             HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL   87 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~   87 (400)
                      ++++.+...+.+..+.+..++ ++.++|+.|.++.+.|+.+++++.+.+... ...|++..|.+++|+++++++.+.+|+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~   82 (387)
T PRK08912          5 NPVFADLPTTIFEVMSQLARE-HGAINLGQGFPDDPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGL   82 (387)
T ss_pred             hHHHhhCCCCHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence            566666666667666666554 689999999998887888999888776543 467988899999999999999887764


Q ss_pred             --CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768           88 --YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (400)
Q Consensus        88 --~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~  164 (400)
                        +++ +|++|+|+++++..++.++.++||+|+++.|+|+.+...++..|++++.+ |.+++++.++++.+++.+.+++ 
T Consensus        83 ~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~~-  160 (387)
T PRK08912         83 DLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLV-RLEPPHWRLPRAALAAAFSPRT-  160 (387)
T ss_pred             CCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccCcCCHHHHHHHhCccc-
Confidence              577 99999999999999999999999999999999999999999999999999 8876667889999999887654 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEeccccccCCCcc
Q 015768          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK~~g~~g~  239 (400)
                       +++++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+++....   ..  ..+++++++|+||.+|++|+
T Consensus       161 -~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  239 (387)
T PRK08912        161 -KAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW  239 (387)
T ss_pred             -eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc
Confidence             8999999999999999999999999999999999999999998887643211   11  13678999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      |+||++.+   +++++.+........++.++..+.++..++....+++++.++.++++++.+.+.|+.++ +.+..+.++
T Consensus       240 RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~  315 (387)
T PRK08912        240 KVGFVCAA---PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQGT  315 (387)
T ss_pred             eeEEEecC---HHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcc
Confidence            99999998   78888887766555677777788888888875567888889999999999999999986 477778888


Q ss_pred             eEEEeeCCCC--CCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       320 ~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +|+|++++..  ..+..+++..+++++||.+.||..|+    ..+++|++++. +++++++++++|++++..
T Consensus       316 ~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~  386 (387)
T PRK08912        316 YFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR  386 (387)
T ss_pred             eEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence            9999999752  23677888888778899999999884    25799999997 789999999999988753

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=1.6e-47  Score=364.79  Aligned_cols=358  Identities=22%  Similarity=0.289  Sum_probs=292.7

Q ss_pred             hcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768           27 RGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA  101 (400)
Q Consensus        27 ~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a  101 (400)
                      +.+.++++++.|++   ++++|+.+.+++.+.+.+.....|++..|.+++|+++++++.+.+|  +++++|++|+|++++
T Consensus        29 ~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a  108 (433)
T PRK06855         29 KLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA  108 (433)
T ss_pred             hccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence            45678999999998   5688899998988887665567899999999999999999998876  568999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEeCCCccchhHHH-HhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (400)
Q Consensus       102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~  179 (400)
                      +..++. +++|||.|++++|+|+.+.... ...|++++.+ |.++ +++.+|++++++.++..+.++++++++|+||||.
T Consensus       109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~  186 (433)
T PRK06855        109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTY-RLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGA  186 (433)
T ss_pred             HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEE-ecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCc
Confidence            999985 7899999999999999876542 3568888888 8874 5678899999999874333589999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCC-CcEEEEeccccccCCCcceeEEEEccCC--cH--
Q 015768          180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE--  251 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~-~~~i~~~s~sK~~g~~g~~~G~i~~~~~--~~--  251 (400)
                      +++.+++++|+++|++||++||+||+|..+.+.+.+...   ... ...++++||||.++++|+|+||++.++.  .+  
T Consensus       187 ~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~  266 (433)
T PRK06855        187 VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVF  266 (433)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHH
Confidence            999999999999999999999999999999886533221   112 3579999999999889999999997421  02  


Q ss_pred             -HHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768          252 -GFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  328 (400)
Q Consensus       252 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  328 (400)
                       .+.+.+..... ...+++.+.|.++..+++++  ++++++.++.++++++.+.+.|++++++.+..|++++|+|++++.
T Consensus       267 ~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~  345 (433)
T PRK06855        267 KKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFED  345 (433)
T ss_pred             HHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecccc
Confidence             22333333222 23457889999999999875  468888999999999999999988755677889989999999986


Q ss_pred             CC--------------------------CCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          329 KH--------------------------LDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       329 ~~--------------------------~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      ..                          .+..+++.+++++.||.+.||..|+. ..++|||++..+++++++++++|++
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~  425 (433)
T PRK06855        346 GVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAE  425 (433)
T ss_pred             ccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHH
Confidence            31                          13567777788899999999999963 3579999997789999999999999


Q ss_pred             HHHHHh
Q 015768          382 GLEELV  387 (400)
Q Consensus       382 ~l~~~~  387 (400)
                      +++++.
T Consensus       426 ~~~~~~  431 (433)
T PRK06855        426 KIEEYL  431 (433)
T ss_pred             HHHHHh
Confidence            998753

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=2e-47  Score=361.35  Aligned_cols=354  Identities=22%  Similarity=0.362  Sum_probs=297.9

Q ss_pred             cCchHHHHHHHHHh-----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--
Q 015768           14 TEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--   86 (400)
Q Consensus        14 ~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--   86 (400)
                      ...+.+.++.++.+     .+++.++|+.|++++++|+.+.+++.+.+..  ...|++..|.+++|+++++++.+.++  
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~   84 (393)
T TIGR03538         7 LQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLP   84 (393)
T ss_pred             CCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCc
Confidence            33445555656554     4678999999999998899999999887753  67798889999999999999988865  


Q ss_pred             --CCCC-cEEEeCChHHHHHHHHHHhcCCCCE--EEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc
Q 015768           87 --LYKS-SVMVTAGANQAFVNIVLTLCDAGDS--VVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE  160 (400)
Q Consensus        87 --~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~--vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~  160 (400)
                        ++++ +|++|+|+++++..++.++++|||+  |+++.|+|+.+...++..|++++.+ |.++ +|+.+|.+.+++.+.
T Consensus        85 ~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~  163 (393)
T TIGR03538        85 TGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFL-NCTAENGFLPDFDAVPESVW  163 (393)
T ss_pred             ccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEe-eccccCCCCCCHHHHHHHHh
Confidence              4564 7999999999999999999999986  9999999999999999999999999 8864 468889999998886


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC-Cccc----------cCCCcEEEEec
Q 015768          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-KHCC----------VEGDHVVNLFS  229 (400)
Q Consensus       161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~----------~~~~~~i~~~s  229 (400)
                      .++  |++++++||||||.+++.+++++|+++|++||++||+||+|..+.+.+. +...          ...+++++++|
T Consensus       164 ~~~--k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S  241 (393)
T TIGR03538       164 RRC--QLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS  241 (393)
T ss_pred             hcc--eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence            554  9999999999999999999999999999999999999999998877531 1110          12467899999


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      +||.++++|+|+||++++   +++++++.........+++.+.|.++...+.. .+++.+.++.++++++.+.+.|+++ 
T Consensus       242 ~SK~~~~~GlRvG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~-  316 (393)
T TIGR03538       242 LSKRSNLPGLRSGFVAGD---AEILKAFLRYRTYHGCAMPIPTQLASIAAWND-EQHVRENRALYREKFAAVLEILGQV-  316 (393)
T ss_pred             chhhcCCcccceEEEecC---HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence            999998999999999998   78888887766555667788899988888864 5678888889999999999999875 


Q ss_pred             CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                       ..+..|.+++|+|++++   .+..+++.++++++||.+.||..|.        ..+++||+++. +++++++++++|++
T Consensus       317 -~~~~~p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  391 (393)
T TIGR03538       317 -LDLELPDAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRS  391 (393)
T ss_pred             -CcccCCCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence             24566888999999998   2567888888778999999999874        24799999997 78999999999987


Q ss_pred             H
Q 015768          382 G  382 (400)
Q Consensus       382 ~  382 (400)
                      +
T Consensus       392 ~  392 (393)
T TIGR03538       392 F  392 (393)
T ss_pred             h
Confidence            4

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.9e-47  Score=330.56  Aligned_cols=357  Identities=22%  Similarity=0.291  Sum_probs=315.8

Q ss_pred             CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc--CCCCCcEEEeCChHHHH
Q 015768           29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAF  102 (400)
Q Consensus        29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~--~~~~~~i~~~~g~t~a~  102 (400)
                      .+++|.++.|+|.    +.+.+++.+|+..+++.+...+|+++.|....|+++|+|+.+..  .+++++|++|+|.++|+
T Consensus        60 ~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI  139 (447)
T KOG0259|consen   60 KKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI  139 (447)
T ss_pred             CceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence            4589999999855    45789999999999999888999999999999999999987776  36799999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~  182 (400)
                      +.++.+|.+||..||++.|+|+-+...++..|.++..++-+.+.+|.+|++.++.+++++|  .++++.||+||+|.+++
T Consensus       140 e~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT--~AivviNP~NPcGnVys  217 (447)
T KOG0259|consen  140 ELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT--VAIVVINPNNPCGNVYS  217 (447)
T ss_pred             HHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCe--eEEEEeCCCCCCccccc
Confidence            9999999999999999999998888888899999999955677789999999999999998  99999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC----CCcEEEEeccccccCCCcceeEEEEccCC-----cHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----VEGF  253 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~-----~~~~  253 (400)
                      .+.|++|+++|+++++++|.||+|+++.|++.++..+.    --.++.++|+||.|=+||||+||++..|.     ....
T Consensus       218 ~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~  297 (447)
T KOG0259|consen  218 EDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKV  297 (447)
T ss_pred             HHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHH
Confidence            99999999999999999999999999999988876653    24567899999999889999999988873     2334


Q ss_pred             HHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCC--
Q 015768          254 ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEK--  329 (400)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~--  329 (400)
                      .+.+..... .+.+++++.|.|+-.-|++ .++++.+...-++++.+...+.|++++++. ...|++.+|+|++++-.  
T Consensus       298 ~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~  376 (447)
T KOG0259|consen  298 VQGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLF  376 (447)
T ss_pred             HHHHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhh
Confidence            455555543 3567899999999999986 447889999999999999999999999977 67899999999987642  


Q ss_pred             --CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          330 --HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       330 --~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                        ..++..|+..|.++..+.+.||..|+.++|+|++++. ..+.++++..||+.+.....++
T Consensus       377 ~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~~~leea~~Rik~Fc~RH~~~  437 (447)
T KOG0259|consen  377 PDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EEEMLEEAFSRIKEFCDRHSKE  437 (447)
T ss_pred             ccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-ChHHHHHHHHHHHHHHHhhhhc
Confidence              3478899999999999999999999999999999996 8899999999999999888743

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=4.4e-47  Score=359.55  Aligned_cols=353  Identities=28%  Similarity=0.436  Sum_probs=295.8

Q ss_pred             hcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768           27 RGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA  101 (400)
Q Consensus        27 ~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a  101 (400)
                      +.+.++++|+.|.|   ++++++.+.+++.+.+... ...|++..|..++|+++++++.+.+|  +++++|++|+|++++
T Consensus        27 ~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a  105 (398)
T PRK08363         27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA  105 (398)
T ss_pred             hcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            45689999999998   6788999999998887654 45688889999999999999988776  578999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      +..++.+++++||+|+++.|+|.++...++..|..++.+.+.+++++.+|++.+++.+.+++  +++++++|+||||.++
T Consensus       106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~NPtG~~~  183 (398)
T PRK08363        106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKT--KAIAVINPNNPTGALY  183 (398)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcce--EEEEEECCCCCCCcCc
Confidence            99999999999999999999999999999999998887733556777889999999887655  9999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcceeEEEEc--cCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~--~~~~~~~~~~  256 (400)
                      +.+++++|+++|+++|+++|+||+|..+.+.+....   .....++++++||||.++++|+|+||++.  +   +++++.
T Consensus       184 ~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~---~~~~~~  260 (398)
T PRK08363        184 EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDP---EGKLAE  260 (398)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCc---HHHHHH
Confidence            999999999999999999999999998877543211   11234689999999999899999999987  4   555555


Q ss_pred             HHHhhc---cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC-CCC
Q 015768          257 LLKVQD---NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK-HLD  332 (400)
Q Consensus       257 l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~  332 (400)
                      +.....   ...++++.+.+.++..+|....+++.+.++.++++++.+.+.|++++.+.+..|.+++|+|++++.. ..+
T Consensus       261 l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~  340 (398)
T PRK08363        261 VREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKD  340 (398)
T ss_pred             HHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCC
Confidence            543322   1246788999999999997656788888999999999999999988666777888899999988752 124


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..+++.++++++||.+.||..|+.  ++++|++++. +++++++++++|++++++.
T Consensus       341 ~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~~  395 (398)
T PRK08363        341 DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRER  395 (398)
T ss_pred             HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            566766776789999999998863  5799999985 8899999999999998774

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=8e-47  Score=358.33  Aligned_cols=373  Identities=25%  Similarity=0.413  Sum_probs=309.7

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHh----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |++++|+.......+.++..+.+    .+.++++|+.|.+++++++.+.+++.+....  ...|++..|.+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~~g~~~lr~~ia~~   78 (397)
T PRK07568          1 MKISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSHSQGIPELREAFAKY   78 (397)
T ss_pred             CchhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCCCCCCHHHHHHHHHH
Confidence            56788887776666666655432    3467999999999998889999998876543  56798889999999999999


Q ss_pred             HHhhc-CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCC-CHHHHHH
Q 015768           81 LNQEN-KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHP-DADWLEK  157 (400)
Q Consensus        81 l~~~~-~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~-~~e~l~~  157 (400)
                      +.... ++++++|++|+|+++++..++.++.++||+|++++|+|..+...++..|++++.+ +.+ ++|+.. +++.+++
T Consensus        79 ~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~~~~~~l~~  157 (397)
T PRK07568         79 YKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPV-TTKIEEGFHLPSKEEIEK  157 (397)
T ss_pred             HHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCCHHHHHH
Confidence            97432 4578999999999999999999999999999999999999988889999999999 876 445543 5789999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEecccc
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSK  232 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK  232 (400)
                      .+++++  ++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+.+....   ..  ..+++++++|+||
T Consensus       158 ~~~~~~--~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK  235 (397)
T PRK07568        158 LITPKT--KAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSK  235 (397)
T ss_pred             hcCccc--eEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchh
Confidence            887655  8999999999999999999999999999999999999999999887653221   11  1467899999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA  312 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (400)
                      .+|++|+|+||+++++  +++++.+..... ..++++.+.|.++..+++..+++.++.++.++++++.+.+.|++++++.
T Consensus       236 ~~~~~G~R~G~~~~~~--~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (397)
T PRK07568        236 RYSACGARIGCLISKN--KELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVV  312 (397)
T ss_pred             hccCCCcceEEEecCC--HHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence            9998999999999864  677777765443 2467889999999999986667888888999999999999999886667


Q ss_pred             ccCCCCceEEEeeCCCCCCCHHHHHHHHHHh-----cCeEEeCCCccC-----CCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +..|.+++|+|++++..  +..++..+++++     +||.+.||..|+     .++++||+++. +++++++++++|.++
T Consensus       313 ~~~p~g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~  389 (397)
T PRK07568        313 CEKPKGAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEA  389 (397)
T ss_pred             ecCCCcceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence            77888889999999753  567888888754     699999998873     24699999986 789999999999999


Q ss_pred             HHHHhc
Q 015768          383 LEELVK  388 (400)
Q Consensus       383 l~~~~~  388 (400)
                      ++++..
T Consensus       390 l~~~~~  395 (397)
T PRK07568        390 LEKYNK  395 (397)
T ss_pred             HHHhhc
Confidence            987653

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=3.9e-47  Score=358.63  Aligned_cols=368  Identities=29%  Similarity=0.481  Sum_probs=306.3

Q ss_pred             HHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      ++|+.......+.++...+    +.+++.++|+.++++..+++.+.+++.+.+.......|++..|.+++|+++++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~   82 (386)
T PRK07550          3 NPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR   82 (386)
T ss_pred             chhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence            3455543344445544443    445789999999998888889999888877554456798889999999999999998


Q ss_pred             hcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc
Q 015768           84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE  160 (400)
Q Consensus        84 ~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~  160 (400)
                      .+|  +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.++ +++.+|++.+++.++
T Consensus        83 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~l~~~~~  161 (386)
T PRK07550         83 LYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYL-PCDEGPGLLPDPAAAEALIT  161 (386)
T ss_pred             HhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ecCCCcCCCCCHHHHHHHhc
Confidence            876  568999999999999999999999999999999999999999999999999999 8874 577789999999987


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-cc--c--CCCcEEEEeccccccC
Q 015768          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-CC--V--EGDHVVNLFSFSKAYG  235 (400)
Q Consensus       161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~--~--~~~~~i~~~s~sK~~g  235 (400)
                      .++  +++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.++.... ..  .  ..++++++.|+||.+|
T Consensus       162 ~~~--~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g  239 (386)
T PRK07550        162 PRT--RAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA  239 (386)
T ss_pred             ccC--cEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence            654  899999999999999999999999999999999999999999886543211 11  1  2457899999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      ++|+|+||++++   +++++.+.........+++.+.+.++..+++...++.++.++.+.++++.+.+.|+++..+.+. 
T Consensus       240 ~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-  315 (386)
T PRK07550        240 LTGHRVGAVVAS---PARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL-  315 (386)
T ss_pred             CcccceEeeecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-
Confidence            899999999998   7888888877766667788999999999998645777888888999999999999887443433 


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +.+++|+|++++....+..+++.+|++++||.+.||..|+.  .+++||+++..+++++++++++|.++
T Consensus       316 ~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        316 ASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF  384 (386)
T ss_pred             CCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence            55789999999863347888999888789999999998863  57999999876789999999999875

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=4.2e-47  Score=366.66  Aligned_cols=354  Identities=24%  Similarity=0.375  Sum_probs=289.0

Q ss_pred             CCCeEEcCCCCCC----------------CCC-------------cHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHH
Q 015768           29 AKNAVSLAQGVVY----------------WQP-------------PKMAMEKVKELVWDP--SISKYGADEGLPELRDAL   77 (400)
Q Consensus        29 ~~~~i~~~~~~~~----------------~~~-------------~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~   77 (400)
                      +.++|+++.|+|+                +..             |..+++++.+++...  ....|++..|.+++|+++
T Consensus        45 ~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ai  124 (481)
T PTZ00377         45 FDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAV  124 (481)
T ss_pred             cceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHH
Confidence            4799999999995                644             457888877666542  356799999999999999


Q ss_pred             HHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHH
Q 015768           78 VKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDAD  153 (400)
Q Consensus        78 a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e  153 (400)
                      ++++.+.+|+  ++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...++..|.+++.+ |.++ ++|.+|++
T Consensus       125 a~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v-~~~~~~~~~~d~~  203 (481)
T PTZ00377        125 AAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPY-YLDEEKGWSLDQE  203 (481)
T ss_pred             HHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEE-EeccccCCCCCHH
Confidence            9999987764  58999999999999999999998 799999999999999999999999999999 8874 57889999


Q ss_pred             HHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC-CCccc-------cCC
Q 015768          154 WLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCC-------VEG  221 (400)
Q Consensus       154 ~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~-------~~~  221 (400)
                      .+++.+++.    ..+|++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++ .++..       ...
T Consensus       204 ~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~  283 (481)
T PTZ00377        204 ELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPA  283 (481)
T ss_pred             HHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcc
Confidence            999988631    135999999999999999999999999999999999999999999988742 22211       111


Q ss_pred             -----CcEEEEeccccc-cCCCcceeEEEEc---cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC---Cc----H
Q 015768          222 -----DHVVNLFSFSKA-YGMMGWRVGYIAY---PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GP----E  285 (400)
Q Consensus       222 -----~~~i~~~s~sK~-~g~~g~~~G~i~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~----~  285 (400)
                           .++++++|+||. ++++|+|+||++.   +   +++++++.+... ...+++.+.|.++..+++.   +.    .
T Consensus       284 ~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p---~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~  359 (481)
T PTZ00377        284 EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP---PEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPL  359 (481)
T ss_pred             cccCCeEEEEEecCCcccccCCcCceEEEEEeCCC---HHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHH
Confidence                 257899999997 5889999999986   5   788888887664 3446889999999999963   11    1


Q ss_pred             HHH---HHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC--CC---------CCHHHHHHHHHHhcCeEEeCC
Q 015768          286 WVT---ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE--KH---------LDDFEVVRWLAHRHGVVVIPG  351 (400)
Q Consensus       286 ~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~l~~~~gi~v~~g  351 (400)
                      +..   +..+.++++++.+.+.|++++++.+..|++++|+|++++.  ..         .+...++.++++++||.+.||
T Consensus       360 ~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG  439 (481)
T PTZ00377        360 YKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPG  439 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCC
Confidence            323   3334568888999999999866788889989999977641  11         123456677888899999999


Q ss_pred             CccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          352 GACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       352 ~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ..|+.   .+++|+|++ .+++++++++++|.++++++.+
T Consensus       440 ~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~~~  478 (481)
T PTZ00377        440 SGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESFMK  478 (481)
T ss_pred             cccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHH
Confidence            99973   469999999 5889999999999999998765

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.3e-47  Score=358.13  Aligned_cols=347  Identities=21%  Similarity=0.332  Sum_probs=294.9

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCCC-cEEEeCChHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKS-SVMVTAGANQAFVN  104 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~---~~~~-~i~~~~g~t~a~~~  104 (400)
                      +.++++|+.|++++++++.+++++.+.+.......|+ ..|...+|+++++++.+.+|   ++++ +|++|+|+++++..
T Consensus        43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~  121 (410)
T PRK06290         43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM  121 (410)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence            5579999999999988899999988876544355685 48999999999999988776   4565 79999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~  183 (400)
                      ++.+++++||+|+++.|+|+.+...++..|++++.+ |.+++ ++.+|++.+++.+..++  ++|++++||||||.+++.
T Consensus       122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~~--k~i~l~nP~NPTG~v~s~  198 (410)
T PRK06290        122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNL-PLLEENNFLPDLDSIPKDIKEKA--KLLYLNYPNNPTGAVATK  198 (410)
T ss_pred             HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-ecCCCcCCcCCHHHHHHhhcccc--eEEEEECCCCCCCcCCCH
Confidence            999999999999999999999999999999999999 88764 57789999998887654  999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      +++++|+++|++||++||+||+|..+.+++.+..  ..  ..+++++++||||.+|++|+|+||++.+   +++++.+..
T Consensus       199 e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~---~~l~~~l~~  275 (410)
T PRK06290        199 EFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN---ELIVKAFAT  275 (410)
T ss_pred             HHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC---HHHHHHHHH
Confidence            9999999999999999999999999887542211  11  2357799999999999999999999998   788888887


Q ss_pred             hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC------CCH
Q 015768          260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH------LDD  333 (400)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  333 (400)
                      .......+.+.+.|.++..+|+. .++.++.++.+.++++.+.+.|++++ +.+..|++++++|++++...      .+.
T Consensus       276 ~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~f~l~v~lp~~~~~~~~~~~~  353 (410)
T PRK06290        276 VKDNNDSGQFIAIQKAGIYALDH-PEITEKIREKYSRRLDKLVKILNEVG-FKAEMPGGTFYLYVKAPKGTKSGIKFENA  353 (410)
T ss_pred             HHhccccCCcHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCeeeEEEEECCCccccCCCCCCH
Confidence            77655666677899999999986 46778888999999999999999986 47777888999999998542      257


Q ss_pred             HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+++++|+++.++.+.||..|  ++++||+++.  .++++.++.++.|+++|..+
T Consensus       354 ~~~~~~Ll~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~  406 (410)
T PRK06290        354 EEFSQYLIKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV  406 (410)
T ss_pred             HHHHHHHHHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence            789999987667888888755  4799999984  47888889999998888764

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=6.8e-47  Score=358.63  Aligned_cols=355  Identities=18%  Similarity=0.235  Sum_probs=295.0

Q ss_pred             hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHH
Q 015768           27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQA  101 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a  101 (400)
                      +.++++++|+.|.++    +++++.+.+++.+.+.......|++..|..++|+++++++.+..+ +++++|++|+|++++
T Consensus        28 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~a  107 (401)
T TIGR01264        28 NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHA  107 (401)
T ss_pred             hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHH
Confidence            335789999999975    678899999998887765456798889999999999999976432 568999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~  180 (400)
                      +..++.+++++||+|+++.|+|..+...++..|++++.+ +.+.+ ++.+|++.+++.++.++  +++++++|+||||.+
T Consensus       108 l~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~  184 (401)
T TIGR01264       108 IEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLY-NLLPDKSWEIDLKQLESLIDEKT--AALIVNNPSNPCGSV  184 (401)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHHHhccCc--eEEEEcCCCCCCCCC
Confidence            999999999999999999999999999999999999988 77543 56789999999887655  899999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC-CCcEEEEeccccccCCCcceeEEEEccCCc---HHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGF  253 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~---~~~  253 (400)
                      ++.+++++|+++|+++|+++|+||+|..+.+.+....   ... ..++++++||||.|+++|+|+||++.++..   .++
T Consensus       185 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~  264 (401)
T TIGR01264       185 FSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDI  264 (401)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHH
Confidence            9999999999999999999999999999987653221   112 235899999999999999999999987421   134


Q ss_pred             HHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---
Q 015768          254 ATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---  329 (400)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---  329 (400)
                      ++.+..... ..++++.+.|.++..+|.+. ++++++.++.++++++.+.+.|++++++.+..|.+++|+|++++..   
T Consensus       265 ~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~  343 (401)
T TIGR01264       265 RDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFP  343 (401)
T ss_pred             HHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccC
Confidence            444444332 24567889999999999752 4778888999999999999999998555667788899999997531   


Q ss_pred             -CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          330 -HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       330 -~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                       ..+..+++..+++++||.+.||..|+.++++|++++. +++++++++++|.++++++
T Consensus       344 ~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~rl~~~~~~~  400 (401)
T TIGR01264       344 EFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEEACSRIQEFCERH  400 (401)
T ss_pred             CCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHhcc
Confidence             1246778888877899999999998878999999996 7899999999999988653

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=3.2e-46  Score=352.54  Aligned_cols=364  Identities=25%  Similarity=0.380  Sum_probs=305.6

Q ss_pred             HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-
Q 015768           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-   88 (400)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-   88 (400)
                      ++...+.+.+..+.+..+. ++.++|+.|.++.+.|+.+++++.+.+... ...|++..|..++|+++++++.+.+|++ 
T Consensus         5 ~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~   82 (387)
T PRK07777          5 RLRPFGTTIFAEMSALAVR-TGAVNLGQGFPDEDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEY   82 (387)
T ss_pred             hhhhcCccHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4545555566666666544 588999999988877788888888877654 4679888999999999999998888764 


Q ss_pred             -CC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--CCCCCHHHHHHhhccCCC
Q 015768           89 -KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPT  164 (400)
Q Consensus        89 -~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l~~~~~  164 (400)
                       ++ +|++|+|+++++..++.++.++||+|+++.|+|+++..+++..|.+++.+ +.+++  ++.+|++++++.+.+++ 
T Consensus        83 ~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~~~~~~-  160 (387)
T PRK07777         83 DPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPV-PLVPDGRGFALDLDALRAAVTPRT-  160 (387)
T ss_pred             CCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEe-ecCCccCCCcCCHHHHHHhcCccc-
Confidence             54 79999999999999999999999999999999999999999999999988 87765  46789999999887654 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCcc
Q 015768          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g~  239 (400)
                       ++|++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+.+.....   .  ..+++++++|+||.+|++|+
T Consensus       161 -~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  239 (387)
T PRK07777        161 -RALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGW  239 (387)
T ss_pred             -EEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCc
Confidence             99999999999999999999999999999999999999999988875432211   1  14578999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      |+||++.+   +++++.+.......++..+.+.+.++..++.....|.+++++.++++++.+.+.|++++ +.+..+.++
T Consensus       240 RiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~g~  315 (387)
T PRK07777        240 KIGWACGP---APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAG-FEVHDSAGT  315 (387)
T ss_pred             eeEEEecC---HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCC-CCccCCCcc
Confidence            99999998   78888888776655667788888888888886678888889999999999999999875 477778889


Q ss_pred             eEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccCC-----CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       320 ~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      +|+|++++. ...+..+++.+|++++||.+.||..|+.     ++++||+++. +++++++++++|.++.
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~  384 (387)
T PRK07777        316 YFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALR  384 (387)
T ss_pred             eEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence            999999763 2236788999998789999999998752     4689999997 8999999999998754

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=2.8e-46  Score=350.53  Aligned_cols=334  Identities=20%  Similarity=0.243  Sum_probs=279.6

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++.++++|+.|++++++++.+.+++.+....  ...|++..|..++|+++++++++++|  +++++|++|+|+++++..+
T Consensus        22 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~   99 (374)
T PRK05839         22 KEYKGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNF   99 (374)
T ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHH
Confidence            3679999999999998888888888876543  67798889999999999999998877  5799999999999999999


Q ss_pred             HHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768          106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       106 ~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~  182 (400)
                      +.+++  ++||.|+++.|+|+.+...++..|++++.+ |.++ +++.++.+..+  + ++  +|++++++||||||.+++
T Consensus       100 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~~~--~-~~--~k~v~i~nP~NPTG~~~s  173 (374)
T PRK05839        100 PQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLM-PLTKENDFTPSLNEKE--L-QE--VDLVILNSPNNPTGRTLS  173 (374)
T ss_pred             HHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEe-ecccccCCcCCcchhh--h-cc--ccEEEEeCCCCCcCcccC
Confidence            88764  578999999999999999999999999999 8874 45766654432  2 23  599999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---------cCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  253 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---------~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~  253 (400)
                      .+++++|+++|++||+++|+||+|..+.++......         ...+++++++||||.||++|+|+||++.+   +++
T Consensus       174 ~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~---~~~  250 (374)
T PRK05839        174 LEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD---ASI  250 (374)
T ss_pred             HHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC---HHH
Confidence            999999999999999999999999987654321111         12368999999999999999999999998   788


Q ss_pred             HHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          254 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      ++++.........+.+.+.|.++..++.. .++.++.++.+.++++.+.+.|.   . .  .|.+++|+|++++    +.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~---~-~--~p~gg~fi~~~~~----~~  319 (374)
T PRK05839        251 LKKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREILG---I-T--IPPATFYVWLPVD----ND  319 (374)
T ss_pred             HHHHHHHHhhcCCCCChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhcC---C-C--CCCeeEEEEEeCC----Ch
Confidence            88888776555567788889888877764 57788888889999888888762   2 2  5677999999997    35


Q ss_pred             HHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      .++..++++++||.+.||..|+.    ++++|||++. +++++.+++++|+++++
T Consensus       320 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        320 EEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE  373 (374)
T ss_pred             HHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence            68888887679999999987763    5899999986 89999999999998874

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=7.6e-46  Score=350.57  Aligned_cols=353  Identities=23%  Similarity=0.388  Sum_probs=297.7

Q ss_pred             HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC-cEEEeCChHHH
Q 015768           25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVTAGANQA  101 (400)
Q Consensus        25 ~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~-~i~~~~g~t~a  101 (400)
                      ..+.++++++|+.|+++...++.+++++.+.+.......|++..|.+++|+++++++.+.+|+  +++ ++++|+|++++
T Consensus        24 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~  103 (395)
T PRK08175         24 ARRRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG  103 (395)
T ss_pred             HHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence            345578999999999888777888888888776555678988999999999999999987765  465 79999999999


Q ss_pred             HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccC
Q 015768          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~  180 (400)
                      +..++..+++|||+|++++|+|+.+...++..|++++.+ |.++++.  ..+++++.++.. ..++++++++|+||||.+
T Consensus       104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~--~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~  180 (395)
T PRK08175        104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSV-PLVEGVD--FFNELERAIRESYPKPKMMILGFPSNPTAQC  180 (395)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEE-ecccCCC--cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence            999999999999999999999999998889999999999 8876542  478888877632 235899999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      ++.+++++|+++|++||+++|+||+|..+.+++.....   .  ..+.+++++|+||.+|++|+|+||++.+   +++++
T Consensus       181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~---~~l~~  257 (395)
T PRK08175        181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN---PELVS  257 (395)
T ss_pred             CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC---HHHHH
Confidence            99999999999999999999999999988875432211   1  1356788999999999999999999988   78999


Q ss_pred             HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC--CCH
Q 015768          256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH--LDD  333 (400)
Q Consensus       256 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  333 (400)
                      ++.+......++++.+.+.++..++.....+++++++.++++++.+.+.|+.++. .+..|.+++|+|++++...  .+.
T Consensus       258 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~~g~~i~i~l~~~~~~~~~  336 (395)
T PRK08175        258 ALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGW-MVEMPKASMYVWAKIPEPYAAMGS  336 (395)
T ss_pred             HHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-cccCCCEEEEEEEECCcccCCCCH
Confidence            8887776566777888899888888765677888889999999999999999864 6777778999999998643  246


Q ss_pred             HHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+++.++++++||.+.||..|+.  ++++||+++. +.+.+.+++++|.+++.+
T Consensus       337 ~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~  389 (395)
T PRK08175        337 LEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA  389 (395)
T ss_pred             HHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence            78888887789999999988853  5699999984 899999999999999864

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.6e-46  Score=359.86  Aligned_cols=351  Identities=21%  Similarity=0.313  Sum_probs=286.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhc-----C------CCCCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEE
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVW-----D------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV   94 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~-----~------~~~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~   94 (400)
                      .++|+|+.++|.+.. ..+.+.+.+...     .      .....|++..|.+.+|+++++++.+.++    +++++|++
T Consensus        38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii  116 (468)
T PLN02450         38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL  116 (468)
T ss_pred             CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence            469999999988764 444444444321     0      1244588888999999999999988765    57899999


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEeccCC-CCCCCCCHHHHHHhhcc----CCCCeEE
Q 015768           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCS-SKTLHPDADWLEKTLET----KPTPKLV  168 (400)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~----~~~~~~v  168 (400)
                      |+|+++++..++.++++|||.|++++|+|+++...+. ..|++++.+ |.+ ++++.++++.+++.+..    ...+|+|
T Consensus       117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v  195 (468)
T PLN02450        117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPI-HCSSSNGFQITESALEEAYQQAQKLNLKVKGV  195 (468)
T ss_pred             ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEE-ecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence            9999999999999999999999999999999988887 589999999 876 56788899999988753    2236999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-------------cCCCcEEEEeccccccC
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-------------VEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-------------~~~~~~i~~~s~sK~~g  235 (400)
                      ++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+.+.++..             ...+++++++||||.+|
T Consensus       196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~  275 (468)
T PLN02450        196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG  275 (468)
T ss_pred             EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence            99999999999999999999999999999999999999988776532211             02468999999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGA  312 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (400)
                      ++|+|+||+++++  +.+.+.+.+...  ...++.+.|.++..+|+++.   .++.+.++.++++++.+.+.|++++ +.
T Consensus       276 l~GlRiG~li~~~--~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g-i~  350 (468)
T PLN02450        276 LPGFRVGAIYSND--EMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG-IK  350 (468)
T ss_pred             CCCccEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence            9999999999985  455666555432  23468899999999998743   3677888999999999999999985 47


Q ss_pred             ccCCCCceEEEeeCCCCCC-----CHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +..+.+++|+|++++....     +..++..++++++||.+.||..|+.  ++|+||+++..+++++++++++|++++.+
T Consensus       351 ~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~  430 (468)
T PLN02450        351 CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES  430 (468)
T ss_pred             ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence            7788889999999874321     1245777788789999999998863  68999999976789999999999999987


Q ss_pred             Hh
Q 015768          386 LV  387 (400)
Q Consensus       386 ~~  387 (400)
                      ..
T Consensus       431 ~~  432 (468)
T PLN02450        431 DS  432 (468)
T ss_pred             cc
Confidence            65

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=5.4e-46  Score=346.14  Aligned_cols=337  Identities=23%  Similarity=0.355  Sum_probs=288.9

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC-cEEEeCChHHHHHHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~-~i~~~~g~t~a~~~~~~~  108 (400)
                      +++|+.|++++++++.+.+++.+....  ...|+++.|..++|+++++++.+.+|+  +++ +|++|+|+++++..++.+
T Consensus         2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~   79 (350)
T TIGR03537         2 LFDFGTGDPKEPTPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLV   79 (350)
T ss_pred             eEeccCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHH
Confidence            689999999998899999999887653  667988889999999999999988774  566 899999999999999999


Q ss_pred             hcCCC---CEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          109 LCDAG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       109 l~~~g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      ++++|   |+|+++.|+|+.+...++..|++++.+ +.+ ++|+.+|++.+++++.+++  +++++++|+||||.+++.+
T Consensus        80 ~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~p~NPtG~~~~~~  156 (350)
T TIGR03537        80 FIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAV-KLKKEDGFLLRLEKVEKSILEET--KIVWINYPHNPTGATAPRS  156 (350)
T ss_pred             HcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEc-ccCcccCCccCHHHHHHhhhhcc--EEEEEeCCCCCcCcccCHH
Confidence            99887   699999999999999999999999999 887 4678889999999887655  9999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  262 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~  262 (400)
                      ++++|+++|++||+++|+||+|..+.++.....  ....+++++++|+||.+|++|+|+||++.+   +++.+.+.....
T Consensus       157 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~  233 (350)
T TIGR03537       157 YLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD---EKLISFLRKLRA  233 (350)
T ss_pred             HHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC---HHHHHHHHHHHH
Confidence            999999999999999999999998766543221  123468899999999999999999999987   788888887766


Q ss_pred             cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      ....+.+.+.+.++..++.. .++..+.++.++++++.+.+.|++.+. .+..+.+++|+|++++.. .+..+++++|. 
T Consensus       234 ~~~~~~~~~~q~~~~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~g~~~~~~~~~~~-~~~~~l~~~L~-  309 (350)
T TIGR03537       234 NFGVASPDFVQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNKVGL-EYLYPDATFYLWVKVPSG-IDAKDYALRLL-  309 (350)
T ss_pred             hhccCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeEEEEEEECCCC-CCHHHHHHHHH-
Confidence            55666666778877777764 567788888999999999999998864 777788889999999864 36788898886 


Q ss_pred             hcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          343 RHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       343 ~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      ++||.+.||..|+.  ++++|++++ .+++++++++++|++
T Consensus       310 ~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       310 ENGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER  349 (350)
T ss_pred             HCCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence            68999999998864  689999998 488999999998875

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=1.2e-45  Score=349.92  Aligned_cols=357  Identities=22%  Similarity=0.290  Sum_probs=296.7

Q ss_pred             HHhcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCCh
Q 015768           25 LVRGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGA   98 (400)
Q Consensus        25 ~~~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~   98 (400)
                      ....++++++|+.|++.    +++++.+++++.+.+.......|++..|..++|+++++++....+  +++++|++|+|+
T Consensus        26 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~  105 (403)
T TIGR01265        26 KPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGC  105 (403)
T ss_pred             HHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCh
Confidence            33457899999999874    678899999999888765456798889999999999999987654  467899999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768           99 NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (400)
Q Consensus        99 t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt  177 (400)
                      |+++..++.++.++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++.+++.+.+++  +++++++|+|||
T Consensus       106 t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~i~~p~NPt  182 (403)
T TIGR01265       106 SQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLY-DLLPEKDWEIDLDGLEALADEKT--VAIVVINPSNPC  182 (403)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-cCCcccCCccCHHHHHHHhCcCc--cEEEEecCCCCC
Confidence            999999999999999999999999999999999999999988 7754 456789999999887665  899999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c-CCCcEEEEeccccccCCCcceeEEEEccCCcH--
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE--  251 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~--  251 (400)
                      |.+++.+++++|+++|+++|+++|+|++|..+.+++.+...   . ...++++++||||.|+++|+|+||++.+++.+  
T Consensus       183 G~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~  262 (403)
T TIGR01265       183 GSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIF  262 (403)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhh
Confidence            99999999999999999999999999999999876533211   1 23468999999999989999999998753101  


Q ss_pred             --HHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768          252 --GFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  328 (400)
Q Consensus       252 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  328 (400)
                        ++.+.+..... ...+++.+.|.++..+++. ...++.+.++++.++++.+.+.|+.++++.+..|.+++|+|++++.
T Consensus       263 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~  341 (403)
T TIGR01265       263 RDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLEL  341 (403)
T ss_pred             HHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccc
Confidence              13344443332 2456788999999999975 3467888889999999999999998865566778889999999975


Q ss_pred             CC----CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          329 KH----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       329 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..    .+..+++.++++++||.+.||..|+.++++||+++. +++.+++++++|.++++++
T Consensus       342 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~~  402 (403)
T TIGR01265       342 ELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEEACSRIKEFCERH  402 (403)
T ss_pred             cccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence            31    256788888777899999999999888999999996 7899999999999988654

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=2.1e-45  Score=348.53  Aligned_cols=372  Identities=22%  Similarity=0.326  Sum_probs=292.3

Q ss_pred             HHHHhhhcCchHH----HHHHHHHhcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHH
Q 015768            7 LAKRALETEMPIM----VQIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK   79 (400)
Q Consensus         7 ~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~   79 (400)
                      -++++.....+..    ....+...+++++++|+.|++   ++++++.+.+++.+.+..  ...|++..|.+++|+++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~   83 (404)
T PRK09265          6 KSSKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQ   83 (404)
T ss_pred             hhHHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHH
Confidence            3455554432333    333334456789999999986   456788999988877654  4679888999999999999


Q ss_pred             HHHhhc--CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHH
Q 015768           80 KLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLE  156 (400)
Q Consensus        80 ~l~~~~--~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~  156 (400)
                      ++.+..  ++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+ +.+. +++.+|.+.++
T Consensus        84 ~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~-~~~~~~~~~~d~~~l~  162 (404)
T PRK09265         84 YYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHY-LCDEEAGWFPDLDDIR  162 (404)
T ss_pred             HHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEE-ecccccCCCCCHHHHH
Confidence            997665  4678999999999999999999999999999999999999999999999998888 7654 45778999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c-CCCcEEEEecccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V-EGDHVVNLFSFSK  232 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~-~~~~~i~~~s~sK  232 (400)
                      +.+.+++  ++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.....   . ...++++++|+||
T Consensus       163 ~~~~~~~--~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK  240 (404)
T PRK09265        163 SKITPRT--KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSK  240 (404)
T ss_pred             Hhccccc--eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchh
Confidence            9887655  99999999999999999999999999999999999999999998876533211   1 2235788999999


Q ss_pred             ccCCCcceeEEEEccCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHH---HHHHHHHHHHHHHHh
Q 015768          233 AYGMMGWRVGYIAYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER---VKDLVRNREIIREAL  305 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~l~~~L  305 (400)
                      .+|++|+|+||++.+.+ ++    +++.+... .....+++.+.|.++..+|...+ +..+.   .+.+.++++.+.+.|
T Consensus       241 ~~~~pGlRiG~~v~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~r~~~~~~L  317 (404)
T PRK09265        241 AYRVAGFRVGWMVLSGP-KKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQ-SINELILPGGRLYEQRDRAWELL  317 (404)
T ss_pred             hccCcccceEEEEEeCc-hHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHHH
Confidence            99989999999996421 33    33444322 22356778899999999997432 22222   346777788899999


Q ss_pred             ccCCCCcccCCCCceEEEeeCCCCC---CCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          306 SPLGEGAVKGGEGAIYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      ++++++.+..|.+++|+|++++...   .+..+++.+++.++||.+.||..|+  .++++|++++. +++++++++++|+
T Consensus       318 ~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~-~~e~l~~~l~rl~  396 (404)
T PRK09265        318 NAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP-RVDDLEEAIGRIG  396 (404)
T ss_pred             hcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHH
Confidence            8886667788888999999987531   1344555556679999999999885  36899999974 8999999999999


Q ss_pred             HHHHHHh
Q 015768          381 RGLEELV  387 (400)
Q Consensus       381 ~~l~~~~  387 (400)
                      ++++.+.
T Consensus       397 ~~l~~~~  403 (404)
T PRK09265        397 RFLSGYR  403 (404)
T ss_pred             HHHHHhc
Confidence            9998653

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=1.2e-45  Score=350.73  Aligned_cols=339  Identities=24%  Similarity=0.401  Sum_probs=277.5

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~  102 (400)
                      ++++++|+.|++++++++.+.+++.+.+...    ....|++..|.+++|+++++++.+.+|  +++++|++|+|+++++
T Consensus        33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al  112 (409)
T PRK07590         33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT  112 (409)
T ss_pred             CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence            5679999999999998999999998887652    356798889999999999999877764  5789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcE-----------EEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEE
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-----------HILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSV  170 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l  170 (400)
                      ..+. .+..|||+|++++|+|+.+...++..|.+           ++.+ |.++ +++.++.+.      +  .+|+|++
T Consensus       113 ~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~d~~~------~--~~k~i~l  182 (409)
T PRK07590        113 GNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYL-PCTAENNFVPELPE------E--KVDIIYL  182 (409)
T ss_pred             HHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEe-ecccccCCcccCcc------c--CceEEEE
Confidence            9865 45689999999999999999999999986           8888 8764 345444321      2  3599999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC--CCcEEEEeccccccCCCcceeEEEE
Q 015768          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE--GDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~--~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      ++||||||.+++.+++++|+++|++||++||+||+|..+.+++....   ...  .+++++++||||.+|++|+|+||++
T Consensus       183 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i  262 (409)
T PRK07590        183 CFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTV  262 (409)
T ss_pred             eCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEE
Confidence            99999999999999999999999999999999999999887553211   111  2468999999999999999999999


Q ss_pred             ccCCcHHHHHHH-----------HHhhccCC-cCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768          246 YPSEVEGFATQL-----------LKVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA  312 (400)
Q Consensus       246 ~~~~~~~~~~~l-----------~~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (400)
                      ++   +++++.+           ........ .+++.+.|.++..++.. +.+++++.++.++++++.+.+.|++++ +.
T Consensus       263 ~~---~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~  338 (409)
T PRK07590        263 VP---KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FE  338 (409)
T ss_pred             cC---HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence            98   6776621           11111122 35788999999888874 446788889999999999999999985 46


Q ss_pred             ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      +..+.+++|+|++++.. .+..+++.++++++||.+.||..|+.  .+++||++.. +++++++++++|++++
T Consensus       339 ~~~~~g~~f~wi~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~~  409 (409)
T PRK07590        339 VYGGVNAPYIWVKTPDG-MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRENVLEAMERIKKAL  409 (409)
T ss_pred             eecCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHHHHHHHHHHHhhC
Confidence            77777899999999864 35678888888788999999998864  4799999764 8999999999998753

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=6.4e-46  Score=354.87  Aligned_cols=338  Identities=20%  Similarity=0.220  Sum_probs=285.9

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .+.++|+.|.++.+++|.+.+++.+....  ...|++..|..++++++++++.+..+ ++++|++|+|+++++..++.++
T Consensus        85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l  161 (431)
T PRK15481         85 TPLHDLAGGNPDPQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAH  161 (431)
T ss_pred             chhhhhhcCCCChhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHh
Confidence            45788999987776667777777765543  45698889999999999999876433 4579999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l~~  188 (400)
                      ++|||.|++++|+|+.+...++..|++++.+ |.+++|  ++++.+++.++.+  +|+++++ +||||||.+++.+++++
T Consensus       162 ~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~g--~~~~~l~~~~~~~--~k~i~~~p~p~NPTG~~~s~~~~~~  236 (431)
T PRK15481        162 LLPGDSVAVEDPCFLSSINMLRYAGFSASPV-SVDAEG--MQPEKLERALAQG--ARAVILTPRAHNPTGCSLSARRAAA  236 (431)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHcCCeEEee-ccCCCC--CCHHHHHHHHhcC--CCEEEECCCCCCCCCccCCHHHHHH
Confidence            9999999999999999999999999999999 887665  6899999988754  4888887 99999999999999999


Q ss_pred             HHHHHHHc-CCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768          189 ISDLCKAA-GSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  266 (400)
Q Consensus       189 i~~l~~~~-~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~  266 (400)
                      |.++|++| +++||+||+|..+.+.+... .....+++++++||||.+| +|+|+||++.+   +++++++........+
T Consensus       237 l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~---~~~~~~~~~~~~~~~~  312 (431)
T PRK15481        237 LRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASD---SATSARLRLRLNSGTQ  312 (431)
T ss_pred             HHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCC---HHHHHHHHHHHhcccc
Confidence            99999999 99999999999887643211 1123468999999999999 99999999998   7888888766554456


Q ss_pred             CccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          267 CASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       267 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      +++.+.|.++..+|+++.  +++.+.++.++++++.+.+.|++.+. .+..|.+++|+|++++.   +..+++..+. ++
T Consensus       313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~-~~~~p~gg~f~~~~l~~---~~~~~~~~l~-~~  387 (431)
T PRK15481        313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGI-AIPSPGDGLNLWLPLDT---DSQATALTLA-KS  387 (431)
T ss_pred             CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccccCCCeEEEEEECCC---CHHHHHHHHH-HC
Confidence            689999999999998753  56788889999999999999998754 66678889999999974   4577888775 79


Q ss_pred             CeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       345 gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ||.+.||..|+.   .+++||+++..+++++++++++|++++.
T Consensus       388 gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        388 GWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN  430 (431)
T ss_pred             CcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence            999999998853   3689999998789999999999998864

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-45  Score=351.16  Aligned_cols=349  Identities=28%  Similarity=0.405  Sum_probs=303.4

Q ss_pred             CCeEEcCCCCCCCC-CcHHHHH-HHHHhhcC--CC-CCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHH
Q 015768           30 KNAVSLAQGVVYWQ-PPKMAME-KVKELVWD--PS-ISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAF  102 (400)
Q Consensus        30 ~~~i~~~~~~~~~~-~~~~v~~-a~~~~~~~--~~-~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~  102 (400)
                      ++.++|+.+.++.. .|.+.++ .+.+.+.+  .. ...|++..|..++|+.+++++....|+  ++++|++|+|+++|+
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al  168 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL  168 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence            78999999986653 4555554 44555433  22 467888899999999999999966664  578999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYI  181 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~  181 (400)
                      +.+.+.+++|||+|++++|+|++...+++..|++++.+ |.|++|  +++|.|++.++..+ +|+++++ +.+||||.++
T Consensus       169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~v-p~d~~G--~~~e~le~~~~~~~-~k~~y~~P~~qNPtG~tm  244 (459)
T COG1167         169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPV-PVDEDG--IDPEALEEALAQWK-PKAVYVTPTFQNPTGVTM  244 (459)
T ss_pred             HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEec-CCCCCC--CCHHHHHHHHhhcC-CcEEEECCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999 999887  59999999998653 7999888 5699999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      |.++.++|+++|++||++||+||.|+.+.+++.+..    .+..+++++++||||.++ ||+|+||++.+   +++++++
T Consensus       245 s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p---~~~~~~~  320 (459)
T COG1167         245 SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAP---PELIEKL  320 (459)
T ss_pred             CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCC---HHHHHHH
Confidence            999999999999999999999999999999865542    223589999999999996 99999999999   8999999


Q ss_pred             HHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCC--CCcccCCCCceEEEeeCCCCCCCH
Q 015768          258 LKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLG--EGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      ...+......++.+.|.++...+..+  .+++.+++..++++++.+.+.|++..  ...+..|.+|+|+|++++... +.
T Consensus       321 ~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~-~~  399 (459)
T COG1167         321 LRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI-DA  399 (459)
T ss_pred             HHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC-CH
Confidence            99888889999999999999999965  47889999999999999999999964  467888999999999999875 77


Q ss_pred             HHHHHHHHHhcCeEEeC-CCccCC----CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          334 FEVVRWLAHRHGVVVIP-GGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~-g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .++....+ ++|+.+.| |..|..    .+++|++++..+.+++++++++|.+++++...
T Consensus       400 ~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~  458 (459)
T COG1167         400 RELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA  458 (459)
T ss_pred             HHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            78888765 78999998 888853    34899999998899999999999999988653

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=2.1e-45  Score=349.30  Aligned_cols=377  Identities=21%  Similarity=0.331  Sum_probs=296.3

Q ss_pred             HHHHhhhcC----chHHHHHHHHH-------hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC-----------CCCCCC
Q 015768            7 LAKRALETE----MPIMVQIQELV-------RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD-----------PSISKY   64 (400)
Q Consensus         7 ~~~~~~~~~----~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y   64 (400)
                      +|+|.....    .+++.....+.       .+..++|+|+.++|-+ ....+.+.+.+....           .....|
T Consensus        13 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN~l-~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y   91 (447)
T PLN02607         13 LSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAENQV-SFDLLEEYLKQHPEASSWGGKGAPGFRENALF   91 (447)
T ss_pred             hhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhhhh-hHHHHHHHHHhCchhhccccccccccchhhcc
Confidence            677765322    45555443332       2335599999998665 345566666554320           013447


Q ss_pred             CCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEE
Q 015768           65 GADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHIL  139 (400)
Q Consensus        65 ~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~  139 (400)
                      ++..|...+|+++|+++.+.++    +++++|++|+|+++++..++.++++|||.|+++.|+|+++...++ ..|++++.
T Consensus        92 ~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~  171 (447)
T PLN02607         92 QDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVP  171 (447)
T ss_pred             CCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEE
Confidence            7788999999999999998765    578999999999999999999999999999999999999988777 57999999


Q ss_pred             eccCCC-CCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC
Q 015768          140 VGPCSS-KTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR  214 (400)
Q Consensus       140 ~~~~~~-~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~  214 (400)
                      + +.+. +++.++.+.+++.++.    ...+|+++++||+||||.+++.+++++|+++|++||+++|+||+|..+.++..
T Consensus       172 v-~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~  250 (447)
T PLN02607        172 I-HCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSAS  250 (447)
T ss_pred             E-eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC
Confidence            8 7763 4577899999998863    23369999999999999999999999999999999999999999998777643


Q ss_pred             Ccccc----------C-CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC
Q 015768          215 KHCCV----------E-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG  283 (400)
Q Consensus       215 ~~~~~----------~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  283 (400)
                      ++...          . .++++++.|+||.||++|+|+||+++.+  +++.+.+.....  ...++.+.|.++...|++.
T Consensus       251 ~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n--~~l~~~~~~~~~--~~~~s~~~q~~~~~~L~d~  326 (447)
T PLN02607        251 EFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYN--DKVVTTARRMSS--FTLVSSQTQHLLASMLSDE  326 (447)
T ss_pred             CcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCc
Confidence            32110          1 4678999999999999999999999864  677666665432  2246788999999999863


Q ss_pred             c---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccC
Q 015768          284 P---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACG  355 (400)
Q Consensus       284 ~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~  355 (400)
                      .   .++...++++.++++.+.+.|++.+. .+..+.+|+|+|++++...     ....++..++++++||.+.||..|+
T Consensus       327 ~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi-~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~  405 (447)
T PLN02607        327 EFTENYIRTNRERLRKRYEMIVQGLRRAGI-ECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCH  405 (447)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccC
Confidence            2   44566778888899999999998754 7777888999999997421     1134677778777899999999886


Q ss_pred             C--CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhccC
Q 015768          356 C--RGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG  390 (400)
Q Consensus       356 ~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~~  390 (400)
                      .  ++|+|++++..+++++++++++|.+++++...++
T Consensus       406 ~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~~  442 (447)
T PLN02607        406 CSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTAS  442 (447)
T ss_pred             CCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhhh
Confidence            4  7999999997689999999999999998765543

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-44  Score=340.43  Aligned_cols=351  Identities=21%  Similarity=0.328  Sum_probs=293.1

Q ss_pred             HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        25 ~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      ....++++|+|+.+.+.+++++.+++++.+.+.......|++..|.+++|+++++++    |+++++|++|+|+++++..
T Consensus        23 ~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l----~~~~~~v~~~~g~t~al~~   98 (380)
T PRK06225         23 YVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL----GLDDDEALITAGATESLYL   98 (380)
T ss_pred             HHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc----CCCCCcEEEeCCHHHHHHH
Confidence            345568899999999999999999999999987655567888889999999999987    7888999999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~  182 (400)
                      ++.+++.+||+|++++|+|..+...++..|++++.+ |.+  ++++.+|++.+++.+.+++  +++++++|+||||.+++
T Consensus        99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~NptG~~~~  175 (380)
T PRK06225         99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEV-PIYSEECNYKLTPELVKENMDENT--RLIYLIDPLNPLGSSYT  175 (380)
T ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEee-ccccccCCccCCHHHHHhhcCCCc--eEEEEeCCCCCCCcCCC
Confidence            999999999999999999998888889999999988 764  3356789999999887665  89999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  262 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~  262 (400)
                      .+++++|+++|++||+++|+||+|..+..+.........++.+++.|+||.+|++|+|+||++++   +++++++.....
T Consensus       176 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~---~~l~~~~~~~~~  252 (380)
T PRK06225        176 EEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT---PDLIEVVKSIVI  252 (380)
T ss_pred             HHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecC---HHHHHHHHHHHh
Confidence            99999999999999999999999987765432222223567899999999999899999999998   788888776542


Q ss_pred             cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                       ..++.+.+.+.++..+++...++.++.++.++++++.+.+.|++++...+ ..+.+++++|+.++....+..++..+|.
T Consensus       253 -~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~  331 (380)
T PRK06225        253 -NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLL  331 (380)
T ss_pred             -cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHH
Confidence             35677888998888888765567777777777888888899988644222 2345588899998754346788998886


Q ss_pred             HhcCeEEeCCCccC---CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          342 HRHGVVVIPGGACG---CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       342 ~~~gi~v~~g~~~~---~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       ++||.+.||..|.   +++++|++++. +++++++++++|+++++.+++
T Consensus       332 -~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~~~  379 (380)
T PRK06225        332 -ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETLRT  379 (380)
T ss_pred             -HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHhhc
Confidence             8899999997664   35699999996 899999999999999998764

>PLN02231 alanine transaminase

Probab=100.00  E-value=6.7e-45  Score=351.34  Aligned_cols=360  Identities=24%  Similarity=0.354  Sum_probs=288.6

Q ss_pred             HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC--C-CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChH
Q 015768           25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD--P-SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN   99 (400)
Q Consensus        25 ~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t   99 (400)
                      .....+++|+|+.+.+.++  ..++++..+.+.+  + ..+.|++..|.+++|+++++++.+++|  +++++|++|+|++
T Consensus       124 ~~~~~p~~i~~~~~~~~fp--~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~  201 (534)
T PLN02231        124 ALCDHPSLLDKSETHGLFS--ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGAS  201 (534)
T ss_pred             HhccCCccCCCCCccccCC--HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHH
Confidence            3455578999987666665  4777777666654  2 357799999999999999999998876  4689999999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccC----CCCeEEEEeCC
Q 015768          100 QAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTPKLVSVVNP  173 (400)
Q Consensus       100 ~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~----~~~~~v~l~~p  173 (400)
                      +++..++.+++ .+||.|+++.|+|+.+...++..|.+++.+ ++++ ++|.+|+++|++.++..    ..+|++++++|
T Consensus       202 ~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~-~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP  280 (534)
T PLN02231        202 PAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPY-YLDEATGWGLEISELKKQLEDARSKGITVRALVVINP  280 (534)
T ss_pred             HHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEE-ecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCC
Confidence            99999999998 489999999999999999999999999999 8875 46889999999988641    13599999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC-CCCcccc-----------CCCcEEEEecccccc-CCCcce
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD-GRKHCCV-----------EGDHVVNLFSFSKAY-GMMGWR  240 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~-~~~~~~~-----------~~~~~i~~~s~sK~~-g~~g~~  240 (400)
                      +||||.+++.+++++|+++|++||++||+||+|..+.+. +.++...           ....+++++|+||.+ |++|+|
T Consensus       281 ~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlR  360 (534)
T PLN02231        281 GNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKR  360 (534)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccc
Confidence            999999999999999999999999999999999999884 3222111           112578999999976 789999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC---c----H---HHHHHHHHHHHHHHHHHHHhccCCC
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---P----E---WVTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~----~---~~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      +||++..+..+++++.+.+... ...+++.+.|.++..+++..   +    +   +..+.++.++++++.+.+.|+++++
T Consensus       361 iGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~g  439 (534)
T PLN02231        361 GGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEG  439 (534)
T ss_pred             eEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999763111788888877654 34566778888888888531   1    1   2234567889999999999999877


Q ss_pred             CcccCCCCceEEEeeC--CCCC---------CCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHH
Q 015768          311 GAVKGGEGAIYLWARL--PEKH---------LDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAA  376 (400)
Q Consensus       311 ~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~  376 (400)
                      +.+..|++++|+|+++  +...         .+...++.+|+++.||.+.||..|+.   ..++|+++.. +++++++++
T Consensus       440 i~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~-~~e~l~eal  518 (534)
T PLN02231        440 VTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILP-QEDKIPAIV  518 (534)
T ss_pred             ceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCC-CHHHHHHHH
Confidence            7888999999999554  3211         12334567788889999999999974   3479999975 899999999


Q ss_pred             HHHHHHHHHHhcc
Q 015768          377 DRLRRGLEELVKD  389 (400)
Q Consensus       377 ~~l~~~l~~~~~~  389 (400)
                      ++|.++++++.++
T Consensus       519 ~RL~~~~~~~~~~  531 (534)
T PLN02231        519 SRLTEFHKSFMDE  531 (534)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988653

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=4.2e-45  Score=350.94  Aligned_cols=376  Identities=20%  Similarity=0.293  Sum_probs=290.6

Q ss_pred             HHHHhhh---cCchHHHHHHHHHhc--------CCCeEEcCCCCCCC--CC-cHHHHHHHHHhhcC-------CCCCCCC
Q 015768            7 LAKRALE---TEMPIMVQIQELVRG--------AKNAVSLAQGVVYW--QP-PKMAMEKVKELVWD-------PSISKYG   65 (400)
Q Consensus         7 ~~~~~~~---~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~--~~-~~~v~~a~~~~~~~-------~~~~~y~   65 (400)
                      +|++...   ++.+....-++.+..        ..++|.|+.++|.+  .. ++.+.+.....+..       .....|+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~   91 (496)
T PLN02376         12 LSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQ   91 (496)
T ss_pred             hhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccC
Confidence            5555552   344444445555433        23689999999776  32 44444433321111       2245688


Q ss_pred             CCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEe
Q 015768           66 ADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILV  140 (400)
Q Consensus        66 ~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~  140 (400)
                      +..|.+++|+++++++.+.+|    +++++|++|+|+++++..++.++++|||.|+++.|+|+++...++ ..|++++.+
T Consensus        92 ~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v  171 (496)
T PLN02376         92 DYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPV  171 (496)
T ss_pred             CCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEE
Confidence            889999999999999998876    679999999999999999999999999999999999999998887 589999999


Q ss_pred             ccCCC-CCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC
Q 015768          141 GPCSS-KTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK  215 (400)
Q Consensus       141 ~~~~~-~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~  215 (400)
                       |.+. +++.++++.++..+.    ....+|+|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+.+.+
T Consensus       172 -~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~  250 (496)
T PLN02376        172 -PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGD  250 (496)
T ss_pred             -eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCC
Confidence             8863 456789999876643    1234699999999999999999999999999999999999999999998876543


Q ss_pred             ccc---c----C-----CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC
Q 015768          216 HCC---V----E-----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG  283 (400)
Q Consensus       216 ~~~---~----~-----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  283 (400)
                      +..   .    .     .+.+++++||||.+|++|+|+||+++++  +.+.+.+.....  ...++.+.|.++..+|+.+
T Consensus       251 ~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~--~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~d~  326 (496)
T PLN02376        251 FVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFN--DSVVSCARKMSS--FGLVSSQTQLMLASMLSDD  326 (496)
T ss_pred             cccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCh
Confidence            221   1    0     1345678999999999999999999864  566665554432  2347889999999999863


Q ss_pred             c---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCC------CHHHHHHHHHHhcCeEEeCCCcc
Q 015768          284 P---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL------DDFEVVRWLAHRHGVVVIPGGAC  354 (400)
Q Consensus       284 ~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~  354 (400)
                      .   +++.+.++.+.++++.+.+.|++.+. .+..+.+|+|+|++++....      +..++...++++.||.+.||..|
T Consensus       327 ~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi-~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F  405 (496)
T PLN02376        327 QFVDNFLMESSRRLGIRHKVFTTGIKKADI-ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSF  405 (496)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCcccc
Confidence            2   33445577788888999999988754 67778889999999975321      23567888887789999999998


Q ss_pred             C--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          355 G--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       355 ~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +  .++|+||+++..+++.+++++++|++++.+...
T Consensus       406 ~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~  441 (496)
T PLN02376        406 RCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKN  441 (496)
T ss_pred             CCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhh
Confidence            6  468999999976789999999999999976543

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=6e-45  Score=341.10  Aligned_cols=349  Identities=23%  Similarity=0.368  Sum_probs=289.8

Q ss_pred             hhHHHHhhhcCchHHHHHHHH-HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            5 AKLAKRALETEMPIMVQIQEL-VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      |++|+|+++.....+..+... .+.++++++|+.+++..+.++.+.+++.+...   ...|++..|.+++|+++++++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~   77 (364)
T PRK07865          1 MPVSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAAD---APGYPTTAGTPELREAIVGWLAR   77 (364)
T ss_pred             CCccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHHHHHH
Confidence            678899998887777777544 46667899999998877777888888876543   24698889999999999999998


Q ss_pred             hcC---CCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh
Q 015768           84 ENK---LYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (400)
Q Consensus        84 ~~~---~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l  159 (400)
                      .+|   +++++|++|+|+++++..++.++ +++||+|+++.|+|+.+...++..|++++.+ +.        +++++.  
T Consensus        78 ~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~--------~~~l~~--  146 (364)
T PRK07865         78 RRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRA-DS--------LTELGP--  146 (364)
T ss_pred             HcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEec-CC--------hhhCCc--
Confidence            875   55899999999999999988888 6999999999999999999999999998877 41        222221  


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-------CCCcEEEEecccc
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-------EGDHVVNLFSFSK  232 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-------~~~~~i~~~s~sK  232 (400)
                       .+  ++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++......       ..+++++++||||
T Consensus       147 -~~--~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  223 (364)
T PRK07865        147 -QR--PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSK  223 (364)
T ss_pred             -cc--ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechh
Confidence             23  5999999999999999999999999999999999999999999887755322211       2357899999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA  312 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (400)
                      .+|++|+|+||++.+   +++++++........++++.+.+.++..+++. .++.++.++.++++++.+.+.|++.+ +.
T Consensus       224 ~~~~~GlRiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~  298 (364)
T PRK07865        224 QSNLAGYRAGFVAGD---PALVAELLEVRKHAGMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLRPALEAAG-FR  298 (364)
T ss_pred             ccCCCceeeEEEecC---HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence            999999999999988   78888888776656677889999999999975 56778888889999999999999875 46


Q ss_pred             ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      +..+.+++|+|+.++.   +..++...+ .++||.+.||..|+  .++++||+++. +++++++++++|+
T Consensus       299 ~~~~~~~~~~~~~~~~---~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~  363 (364)
T PRK07865        299 VDHSEAGLYLWATRGE---DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA  363 (364)
T ss_pred             ccCCCccEEEEEeCCC---CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence            7778888999998853   456677666 58999999999876  46799999986 7899999999885

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4e-45  Score=347.86  Aligned_cols=350  Identities=22%  Similarity=0.327  Sum_probs=276.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh-c-C-C-C--CCcEEEeCChHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE-N-K-L-Y--KSSVMVTAGANQAFV  103 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~-~-~-~-~--~~~i~~~~g~t~a~~  103 (400)
                      .+.|+|+.|.+++++|+.+.+.+... ..   ..|+++.|..++|+++++++.+. . + . +  .++|++|+|+++|+.
T Consensus       100 ~~~i~l~~g~p~~~~~~~v~e~~~~~-~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~  175 (527)
T PRK09275        100 RDAVSYVRDQLGFDADEFVYELVDGI-IG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMC  175 (527)
T ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHH-hc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHH
Confidence            34799999999999888888855444 32   24999999999999999966543 2 2 1 2  248999999999999


Q ss_pred             HHHHH-----hcCCCCEEEEeCCCccchhHHHHhcC--cEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768          104 NIVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus       104 ~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g--~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                      .++.+     +++|||+|++++|+|+.+...++..|  +.++.+ +.+ +++|.++.+.+++++++++  |+|++++|+|
T Consensus       176 ~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v-~~~~~~~f~~d~~~l~~~~~~~t--kai~l~nP~N  252 (527)
T PRK09275        176 YIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHI-NADEENEWQYPDSELEKLRDPSI--KALFLVNPSN  252 (527)
T ss_pred             HHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEe-ecCcccCCCCCHHHHHhhcCCCC--CEEEEeCCcC
Confidence            99986     68999999999999999999887765  566666 554 4568999999999887665  9999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCC--cH
Q 015768          176 PSGTYIPERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE  251 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~--~~  251 (400)
                      |||.+++.+++++|+++|++  ++++||+||+|..+.+..........+++++++||||.||++|+|+||++++.+  ..
T Consensus       253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~  332 (527)
T PRK09275        253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFD  332 (527)
T ss_pred             CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHH
Confidence            99999999999999999964  599999999999887532222222346899999999999999999999998852  00


Q ss_pred             HHHHHH--------------------------------HHhhccCCcCccHHHHHHH-----HHHhcCCcHHHHHHHHHH
Q 015768          252 GFATQL--------------------------------LKVQDNIPICASIISQHLA-----LYSLQTGPEWVTERVKDL  294 (400)
Q Consensus       252 ~~~~~l--------------------------------~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~  294 (400)
                      ++++.+                                .......+.+.+.+.|.++     .++++..+++..++++.+
T Consensus       333 ~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~  412 (527)
T PRK09275        333 KLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDII  412 (527)
T ss_pred             HHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence            122222                                2333445677888888863     344665557788889999


Q ss_pred             HHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---------------CCCHHHHHHHHHHhcCeEEeCCCccCC-CC
Q 015768          295 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGACGC-RG  358 (400)
Q Consensus       295 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~  358 (400)
                      +++++.+.+.|. .+ .....|.+++|+|++++..               ..+..+++.+|+++.||.+.||..|+. ++
T Consensus       413 ~~Rr~~l~~~Lg-~~-~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~  490 (527)
T PRK09275        413 RRRYKALYEGLG-LP-EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEW  490 (527)
T ss_pred             HHHHHHHHHHcC-CC-CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCC
Confidence            999999988883 22 2335688899999998642               125778999999999999999999974 67


Q ss_pred             eEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          359 HLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       359 ~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++|+|++..+++++.+++++|.+++.++.+
T Consensus       491 ~vRis~a~~~~~~~~~~~~rl~~~l~~y~~  520 (527)
T PRK09275        491 SVRVSLANLNEEDYAKIGKAIRKLLDEYYE  520 (527)
T ss_pred             eEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence            899999977899999999999999988764

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-44  Score=338.13  Aligned_cols=337  Identities=22%  Similarity=0.305  Sum_probs=275.1

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~  104 (400)
                      +.+++|+.|++++++|+.+++++.+.+..+. ...| +..|..++|+++++++.+.++    +++++|++|+|+++++..
T Consensus        28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~  106 (374)
T PRK02610         28 IQLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRS  106 (374)
T ss_pred             cceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHH
Confidence            3589999999999999999999998877642 3568 457899999999999987753    678999999999999998


Q ss_pred             HHHHhcCCCC-EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015768          105 IVLTLCDAGD-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       105 ~~~~l~~~gd-~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~  181 (400)
                      ++.+++.+|| +|+++.|+|..+...++..|++++.+ +.+++++.+|++++++.++.  ...++++++++||||||.++
T Consensus       107 ~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~  185 (374)
T PRK02610        107 LLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRV-GRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL  185 (374)
T ss_pred             HHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEe-cCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC
Confidence            8888887886 89999999999999999999999999 88776678999999998863  12369999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  261 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~  261 (400)
                      +.++++++.++|  +++++|+||+|..+.+..........++.++++||||.+|++|+|+||++++   +++++.+....
T Consensus       186 s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~---~~l~~~l~~~~  260 (374)
T PRK02610        186 TAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH---PELIAVLEKVR  260 (374)
T ss_pred             CHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecC---HHHHHHHHHhc
Confidence            999999999877  4999999999998864221111122457888999999999999999999998   88888888765


Q ss_pred             ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      .  .++.+.+.|.++..+++....+.+.+. .+.+.++.+.+.|+.++.+.+. |.+++|+|++++... +..+++..+ 
T Consensus       261 ~--~~~~~~~~q~a~~~~l~~~~~~~~~~~-~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~-~~~~~~~~l-  334 (374)
T PRK02610        261 L--PYNLPSFSQLAAQLALEHRQELLAAIP-EILQERDRLYQALQELPQLRVW-PSAANFLYLRLSQDA-ALAALHQAL-  334 (374)
T ss_pred             C--CCCCCHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCC-CHHHHHHHH-
Confidence            3  566788999999999986444444444 4455577788888887554544 677999999998643 677888876 


Q ss_pred             HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          342 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .++||.+.++     ++++||+++.  .+++++++++|++++.++
T Consensus       335 ~~~gi~v~~~-----~~~lRls~~~--~~~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        335 KAQGTLVRHT-----GGGLRITIGT--PEENQRTLERLQAALTQL  372 (374)
T ss_pred             HHCCEEEEeC-----CCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence            4899999763     5789999985  567899999999998765

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.3e-44  Score=337.44  Aligned_cols=328  Identities=20%  Similarity=0.295  Sum_probs=278.9

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      ++++.|+|+.|++++++|+.+++++.+.+..  ...| +..|..++|+++++++    ++++++|++|+|+++++..++.
T Consensus        27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~----~~~~~~I~vt~Gs~e~i~~~~~   99 (366)
T PRK01533         27 GDHSFVKLASNENPFGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL----HVKMEQVLCGSGLDEVIQIISR   99 (366)
T ss_pred             CCCceEEeCCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence            5678999999999999999999999887654  2346 5678899999999998    7899999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      +++++||+|++++|+|+.+...++..|++++.+ |.+++  .+|++.+++.+++++  +++++++||||||.+++.++++
T Consensus       100 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~--~~d~~~l~~~~~~~~--~~v~i~~P~NPTG~~~~~~~l~  174 (366)
T PRK01533        100 AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEV-ALNNG--VYDLDEISSVVDNDT--KIVWICNPNNPTGTYVNDRKLT  174 (366)
T ss_pred             HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEe-ecCCC--CcCHHHHHHHhCcCC--cEEEEeCCCCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999 88644  479999999887655  9999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCC--c-c-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRK--H-C-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~--~-~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      +|+++|++++ ++|+||+|..+.+.+..  . . ....+++++++||||.+|++|+|+||++++   +++++.+.+... 
T Consensus       175 ~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~---~~~~~~l~~~~~-  249 (366)
T PRK01533        175 QFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH---EELIEKLNVVRL-  249 (366)
T ss_pred             HHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC---HHHHHHHHHhcC-
Confidence            9999998766 67789999987764321  1 1 113468999999999999999999999998   889999887653 


Q ss_pred             CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768          264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                       .++++.+++.++..+|+. .+|.++..+...++++++.+.++.++. .+..+. ++|+|++++    +..++..+|+ +
T Consensus       250 -~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~~g~-~~~~~~-~nf~~~~~~----~~~~~~~~l~-~  320 (366)
T PRK01533        250 -PFNVSSLAQKAATIAFGD-DEFIEEIVRVNTEGLRQYESFCKENEI-PFYQSQ-TNFIFLPVE----NGGEIYEACA-H  320 (366)
T ss_pred             -CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-ccCCCc-CcEEEEeCC----CHHHHHHHHH-H
Confidence             578999999999999975 577788888888888888888888764 666665 889999986    3567888776 8


Q ss_pred             cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +||.|++   |  ++++||+++.  .++.+.+++.|++.+....+
T Consensus       321 ~GI~Vr~---~--~~~iRis~~~--~~~~~~l~~al~~~~~~~~~  358 (366)
T PRK01533        321 AGFIIRP---F--PNGVRITVGT--REQNEGVISVLQQHFENKKR  358 (366)
T ss_pred             CCcEEcc---C--CCceEEeCCC--HHHHHHHHHHHHHHHHhccc
Confidence            9999997   3  6889999984  78889999999888776543

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.6e-43  Score=335.36  Aligned_cols=339  Identities=25%  Similarity=0.400  Sum_probs=272.9

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      ++++++|+.+++++++++.+.+++.+.+.+.    ....|++..|.+.+|+++++++.+. ++++++|++|+|+++++..
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d~I~it~Ga~~al~~  110 (402)
T TIGR03542        32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDPEEIFISDGAKCDVFR  110 (402)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCHHHEEECCCcHHHHHH
Confidence            5789999999999998999999998887652    2356888899999999999986433 4789999999999999998


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCc-----------EEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV-----------THILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVN  172 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~  172 (400)
                      +. .+..+||+|++++|+|..+...++..|+           +++.+ |.++ +++.++++.     ..+  +++|++++
T Consensus       111 l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~-----~~~--~~~i~l~n  181 (402)
T TIGR03542       111 LQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYL-PCTKENNFIPDLPE-----EPK--IDIIYLCS  181 (402)
T ss_pred             HH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEe-ecchhhCCCCCccc-----cCC--ceEEEEeC
Confidence            64 5567999999999999999999999999           88888 7764 355554321     123  59999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC--CCcEEEEeccccccCCCcceeEEEEcc
Q 015768          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE--GDHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      ||||||.+++.+++++|+++|++||+++|+||+|..+.+++....   ...  .+++++++||||.+|++|+|+||++++
T Consensus       182 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~  261 (402)
T TIGR03542       182 PNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVP  261 (402)
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEec
Confidence            999999999999999999999999999999999999887543211   111  256889999999999999999999998


Q ss_pred             CCcHHHH--------HHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          248 SEVEGFA--------TQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       248 ~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                         ++++        +.+.........+++.+.|.++..++... .++..+.++.++++++.+.+.|++.+ +.+..+.+
T Consensus       262 ---~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~  337 (402)
T TIGR03542       262 ---KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEH  337 (402)
T ss_pred             ---HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCc
Confidence               5655        22222222223357889999888888753 24566677788889999999998875 46677777


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ++|+|++++.. .+..+++.++++++||.+.||..|+.  ++++||+++. +++++++++++|++++
T Consensus       338 ~~f~~v~l~~~-~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~  402 (402)
T TIGR03542       338 APYLWVKTPEG-ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEACERIKEAL  402 (402)
T ss_pred             eeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHhhC
Confidence            99999999864 36778898888778999999998863  5899999876 8999999999998763

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.1e-44  Score=326.40  Aligned_cols=330  Identities=25%  Similarity=0.389  Sum_probs=284.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      +++++|+.+++++++|+.+.+++.+.+..  ...|+ .....++++++++++    | .++++|++++|+++.+..++++
T Consensus        22 ~~~i~LssNenP~gp~~~~~~~~~~~~~~--~~rYP-d~~~~~l~~a~a~~~----~~~~~~~V~~gnGsde~i~~l~~~   94 (356)
T COG0079          22 PGIIKLSSNENPYGPPPKVIEAIRAALDK--LNRYP-DPDYRELRAALAEYY----GVVDPENVLVGNGSDELIELLVRA   94 (356)
T ss_pred             ccceeecCCCCCCCCCHHHHHHHHHHHHh--hccCC-CCcHHHHHHHHHHHh----CCCCcceEEEcCChHHHHHHHHHH
Confidence            46899999999999999999999888874  66784 447888999999988    5 7789999999999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      ++.+||+|++..|+|..+...++..|++++.+ |.++  +..|++.+.+.+.+++  ++|++||||||||..++.+++++
T Consensus        95 ~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v-~~~~--~~~d~~~~~~~~~~~~--~lv~i~nPNNPTG~~~~~~~l~~  169 (356)
T COG0079          95 FVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKV-PLKE--FRLDLDAILAAIRDKT--KLVFLCNPNNPTGTLLPREELRA  169 (356)
T ss_pred             hhcCCCEEEEcCCChHHHHHHHHhcCCeEEEe-cccc--cccCHHHHHHhhhcCC--CEEEEeCCCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999 8877  7889999999888744  99999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  268 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~  268 (400)
                      +++.+.+ +.++|+||+|.+|............+++++++||||+||++|+|+||++.+   +++++.+++.+.  +|+.
T Consensus       170 l~~~~~~-~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~---~~~i~~l~~vr~--p~~v  243 (356)
T COG0079         170 LLEALPE-GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN---PELIAALNKVRP--PFNV  243 (356)
T ss_pred             HHHhCCC-CcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCC---HHHHHHHHHhcC--CCCC
Confidence            9999888 999999999999886221111124677999999999999999999999998   899999999986  8889


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      |.+++.++.++++. .++..+..+.+...++++.+.|+.++ .. +.+.. ++|++++++. .. ...+.+.|+ ++||.
T Consensus       244 ~~~a~~aa~aal~~-~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~-aNFvlv~~~~-~~-~~~l~~~L~-~~gii  317 (356)
T COG0079         244 SSPALAAAIAALRD-ADYLEESVERIREERERLYAALKALG-LFGVFPSQ-ANFVLVRVPD-AE-AAALAEALL-KKGIL  317 (356)
T ss_pred             CHHHHHHHHHHccc-HHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCC-CcEEEEECCC-cc-HHHHHHHHH-HCCEE
Confidence            99999999999997 48889999999999999999999998 45 66555 9999999986 22 557788776 78999


Q ss_pred             EeCCCcc-CCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          348 VIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       348 v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++..... ..++++||+++.  +++-+.++++|.+++..
T Consensus       318 vR~~~~~~~~~~~lRitvgt--~een~~ll~AL~~~~~~  354 (356)
T COG0079         318 VRDCSSVGLLPGYLRITVGT--PEENDRLLAALREVLKG  354 (356)
T ss_pred             EEeCCCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHHhc
Confidence            9988652 356799999995  66667777777776653

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.1e-44  Score=333.41  Aligned_cols=327  Identities=25%  Similarity=0.346  Sum_probs=275.1

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .+.++++|+.|++++++|+.+.+++.+.+..  ...|+ ..+.+.+|+++++++    ++++++|++|+|+++++..+++
T Consensus        28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~it~G~~~al~~~~~  100 (357)
T PRK14809         28 DPDDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYP-KASHADLTAALADRW----DVSPEQVWLANGGDGALDYLAR  100 (357)
T ss_pred             CccceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence            4578999999999999999999999887654  56685 567899999999988    7889999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      +++++||.|++++|+|..+....+..|..++.+ |.+. +++.++.+.+.+... +  +++|++++||||||.++|.+++
T Consensus       101 ~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~-~l~~~~~~~~~~~~~~~~~~-~--~k~i~l~~p~NPTG~~~s~~~~  176 (357)
T PRK14809        101 AMLDPGDTVLVPDPGFAYYGMSARYHHGEVREY-PVSKADDFEQTADTVLDAYD-G--ERIVYLTSPHNPTGSEIPLDEV  176 (357)
T ss_pred             HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEE-ecccCcCCCcCHHHHHHhhc-C--CcEEEEeCCCCCCCcCCCHHHH
Confidence            999999999999999988888888889998888 7764 467778877766542 3  4899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      ++|+++|++ ++++|+||+|..+.+.+..... ...+++++++||||.+|++|+|+||++++   +++++++.+...  +
T Consensus       177 ~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~---~~~~~~~~~~~~--~  250 (357)
T PRK14809        177 EALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP---EEWADAYARVNT--P  250 (357)
T ss_pred             HHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecC---HHHHHHHHHhCC--C
Confidence            999999874 7899999999988764432211 23468899999999999999999999999   788888877643  6


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  345 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  345 (400)
                      ++.+.+.+.++..+|+. .+++++.++.++++++.+.+.|+...    . +.+++|+|++++    +..++...+ .++|
T Consensus       251 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~----~-~~~g~f~~~~~~----~~~~~~~~l-~~~g  319 (357)
T PRK14809        251 FAASELACRAGLAALDD-DEHVERTVETARWAREYIREELDAPT----W-ESAGNFVLAEVG----DASAVAEAA-QERG  319 (357)
T ss_pred             CCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHhcCcc----C-CCCCCEEEEECC----CHHHHHHHH-HHCC
Confidence            67888999999998875 67788888888889999999887642    2 456899999985    467888876 5889


Q ss_pred             eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      |.+.||..|+.++++||+++  +.+++++++++|+++++
T Consensus       320 v~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        320 VIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA  356 (357)
T ss_pred             EEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence            99999999987899999987  47899999999998764

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-42  Score=327.72  Aligned_cols=342  Identities=27%  Similarity=0.457  Sum_probs=284.7

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~  104 (400)
                      ..+.++|+.|++++++++.+.+++.+.+...  ....|++..|...+|+.+++++.+.++  +++++|++|+|+++++..
T Consensus        32 ~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~  111 (394)
T PRK06836         32 ADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNV  111 (394)
T ss_pred             CCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHH
Confidence            4678999999988888889999888777542  256788889999999999999988764  578999999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      ++.+++++||.|++++|+|..+...++..|++++.+ |.+++++.+|++.+++.+++++  +++++++|+||||.++|.+
T Consensus       112 ~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~~~~~  188 (394)
T PRK06836        112 ALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVV-PTDTDTFQPDLDALEAAITPKT--KAVIINSPNNPTGVVYSEE  188 (394)
T ss_pred             HHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEE-ecCCccCcCCHHHHHhhcCcCc--eEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999999999999999999 8887766789999999997655  9999999999999999999


Q ss_pred             HHHHHHHHHHH------cCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH-
Q 015768          185 LLKRISDLCKA------AGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT-  255 (400)
Q Consensus       185 ~l~~i~~l~~~------~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~-  255 (400)
                      ++++|+++|++      ||+++|+||+|.++.+++....  ....+++++++|+||.+|++|+|+||++.+   +++.+ 
T Consensus       189 ~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~---~~~~~~  265 (394)
T PRK06836        189 TLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN---PEMEDA  265 (394)
T ss_pred             HHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecC---HHHhhh
Confidence            99999999999      8999999999999887653221  123568999999999999999999999998   34322 


Q ss_pred             -----HHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768          256 -----QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  329 (400)
Q Consensus       256 -----~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  329 (400)
                           .+...... ...+.+.+.|.++...++..     ...+.++++++.+.+.|++++ ..+..+.+++|+|++++. 
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-----~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~~~~~~~~~-  338 (394)
T PRK06836        266 DDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-----VDVSIYKRNRDLLYDGLTELG-FECVKPQGAFYLFPKSPE-  338 (394)
T ss_pred             HHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHhCC-CEeecCCceEEEEEeCCC-
Confidence                 22222221 12457788899988888752     124567778888999998886 477778889999999876 


Q ss_pred             CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                       .+..+++..+ .++||.+.||..|+.++++||+++. +++++++++++|+++++++
T Consensus       339 -~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~  392 (394)
T PRK06836        339 -EDDVAFCEKA-KKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY  392 (394)
T ss_pred             -CCHHHHHHHH-HhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence             2677888665 5889999999998878899999995 8999999999999999865

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=1e-43  Score=337.73  Aligned_cols=348  Identities=21%  Similarity=0.291  Sum_probs=268.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH-HHHHhhcC---CCCC--cEEEeCChHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALV-KKLNQENK---LYKS--SVMVTAGANQAFV  103 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a-~~l~~~~~---~~~~--~i~~~~g~t~a~~  103 (400)
                      ++.|+|+.|+++++++ +.+.++.+.+...   .|+++.+...++++++ +++.+..+   .+++  +|++|+|+++|+.
T Consensus        94 ~~~i~l~~g~p~~~~~-~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~  169 (521)
T TIGR03801        94 RDIISYVIDQLGFDPD-AFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMC  169 (521)
T ss_pred             HHHHhhcCCCCCCCCC-HHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHH
Confidence            3579999999999855 5556555554321   4876777777777777 56665543   2334  8999999999999


Q ss_pred             HHHHH-----hcCCCCEEEEeCCCccchhHHHHhc--CcEEEEeccCCC-CC-----CCCCHHHHHHhhccCCCCeEEEE
Q 015768          104 NIVLT-----LCDAGDSVVMFAPYYFNSYMSFQMT--GVTHILVGPCSS-KT-----LHPDADWLEKTLETKPTPKLVSV  170 (400)
Q Consensus       104 ~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~--g~~~~~~~~~~~-~~-----~~~~~e~l~~~l~~~~~~~~v~l  170 (400)
                      .++.+     +++|||+|+++.|+|+.+...++..  |++++.+ +.++ ++     |.++.+.+++++++++  |++++
T Consensus       170 ~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i-~~~~~~~~g~~~~~~d~~~l~~~~~~~~--kai~l  246 (521)
T TIGR03801       170 YIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRI-KADEMTEDGTHTWQYPDKELEKLRDPSI--KALFV  246 (521)
T ss_pred             HHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEe-ecccccccccccCCCCHHHHHHhcCCCC--cEEEE
Confidence            99887     6899999999999999999887665  6788877 6643 22     8899999998876655  99999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          171 VNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      ++|+||||.+++.+++++|+++|++|  +++||+||+|+.+.+..........+++++++|+||.+|++|+|+||++.+.
T Consensus       247 ~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~  326 (521)
T TIGR03801       247 VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHK  326 (521)
T ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence            99999999999999999999999986  9999999999988753222222234689999999999999999999999884


Q ss_pred             CcHH----HH--------HHH------------------------HHhhccCCcCccHHHHH-----HHHHHhcCCcHHH
Q 015768          249 EVEG----FA--------TQL------------------------LKVQDNIPICASIISQH-----LALYSLQTGPEWV  287 (400)
Q Consensus       249 ~~~~----~~--------~~l------------------------~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~  287 (400)
                        +.    ++        +.+                        +......+.+.+.+.|.     ++.++++....+.
T Consensus       327 --~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~  404 (521)
T TIGR03801       327 --DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYK  404 (521)
T ss_pred             --hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHH
Confidence              21    21        111                        22222345566777776     3445555545778


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC---------------CCHHHHHHHHHHhcCeEEeCCC
Q 015768          288 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH---------------LDDFEVVRWLAHRHGVVVIPGG  352 (400)
Q Consensus       288 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~~~gi~v~~g~  352 (400)
                      +++++.++++++.+.+.| ... .....+.+++|+|++++...               .+..+++.+|+++.||.+.||.
T Consensus       405 ~~~~~~~~~R~~~l~~~L-g~~-~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~  482 (521)
T TIGR03801       405 AETKDICRRREKLLFRGL-GLP-LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGG  482 (521)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCC-CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCch
Confidence            888899999999999988 222 23456778999999997421               1567899999999999999999


Q ss_pred             ccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          353 ACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       353 ~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .|+. .+++|||++..+++++.++.++|.+++.++.+
T Consensus       483 ~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~  519 (521)
T TIGR03801       483 GFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE  519 (521)
T ss_pred             hcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9985 56899999867899999999999999988754

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=2.1e-43  Score=334.05  Aligned_cols=356  Identities=21%  Similarity=0.218  Sum_probs=277.6

Q ss_pred             hhhcCchHHHHHHHHHhc--CCCeEEcCCCC---CCCCCc--HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768           11 ALETEMPIMVQIQELVRG--AKNAVSLAQGV---VYWQPP--KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~---~~~~~~--~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      +.....+.+..+.+.++.  .++.|+|+.|.   ++..+|  +.+.+++.+.+..+....|++..|.+++|+++++++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~   84 (396)
T PRK09257          5 LEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFG   84 (396)
T ss_pred             CCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcC
Confidence            334444455556555554  46799999996   334334  67888888877654456799999999999999999987


Q ss_pred             hcC--CCCCcE--EEeCChHHHHHHHHHHh--cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHHHHH
Q 015768           84 ENK--LYKSSV--MVTAGANQAFVNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLE  156 (400)
Q Consensus        84 ~~~--~~~~~i--~~~~g~t~a~~~~~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~  156 (400)
                      ..+  +++++|  ++|+|+++|+..++.++  ++|||+|++++|+|+++...++..|++++.+ |. +++++.+|++.++
T Consensus        85 ~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~  163 (396)
T PRK09257         85 ADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTY-PYYDAATKGLDFDAML  163 (396)
T ss_pred             CCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEE-eccccccCccCHHHHH
Confidence            765  367877  99999999999998776  4899999999999999999999999999999 87 4455678999999


Q ss_pred             HhhccCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC-CCccc----c-CCCcEEEEec
Q 015768          157 KTLETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCC----V-EGDHVVNLFS  229 (400)
Q Consensus       157 ~~l~~~~~-~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~----~-~~~~~i~~~s  229 (400)
                      +.++.... .+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.++. .....    . ..+++++++|
T Consensus       164 ~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~S  243 (396)
T PRK09257        164 ADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASS  243 (396)
T ss_pred             HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEE
Confidence            98863221 2555567999999999999999999999999999999999999887642 11111    1 2457899999


Q ss_pred             cccccCCCcceeEEEEc--cCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHH
Q 015768          230 FSKAYGMMGWRVGYIAY--PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRN  297 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~--~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~  297 (400)
                      |||.++++|+|+||++.  ++  ++    +..++.........+++.+.|.++..++..+      .++++++++.++++
T Consensus       244 fSK~~~~~GlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~r  321 (396)
T PRK09257        244 FSKNFGLYGERVGALSVVAED--AEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAM  321 (396)
T ss_pred             cCCcCccccccceeEEEEeCC--HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999988999999973  32  33    3333433333334456888999999999864      24566788899999


Q ss_pred             HHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHH
Q 015768          298 REIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA  374 (400)
Q Consensus       298 ~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~  374 (400)
                      ++.+.+.|++++   ...+..|++|+|+|++++      .+++.++++++||.+.|.      +  ||+++..+++++++
T Consensus       322 r~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~  387 (396)
T PRK09257        322 RQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT------PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDY  387 (396)
T ss_pred             HHHHHHHHHhcCCCCCcccccccceEEEecCCC------HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHH
Confidence            999999999874   256777889999999885      245667878999999873      1  99998778999999


Q ss_pred             HHHHHHHHH
Q 015768          375 AADRLRRGL  383 (400)
Q Consensus       375 ~~~~l~~~l  383 (400)
                      ++++|++++
T Consensus       388 ~~~~i~~~~  396 (396)
T PRK09257        388 VAEAIAAVL  396 (396)
T ss_pred             HHHHHHhhC
Confidence            999998763

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=9.4e-43  Score=325.05  Aligned_cols=335  Identities=23%  Similarity=0.360  Sum_probs=276.3

Q ss_pred             HHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCCCcEEE
Q 015768           18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKSSVMV   94 (400)
Q Consensus        18 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~---~~~~~i~~   94 (400)
                      +...+.+....++++++|+.+++..++++.+.+++.+...   ...|++..|..++|+++++++++++|   +++++|++
T Consensus         9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~i   85 (357)
T TIGR03539         9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLP   85 (357)
T ss_pred             HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEE
Confidence            3444455556678899999999888778888888876543   45698889999999999999988764   56899999


Q ss_pred             eCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768           95 TAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus        95 ~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      |+|+++++..++..+ .++||.|++++|+|+++...++..|++++.+ +        +.+.+.   ..+  +++|++++|
T Consensus        86 t~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~--------~~~~l~---~~~--~~~v~~~~p  151 (357)
T TIGR03539        86 VIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAA-D--------DPTELD---PVG--PDLIWLNSP  151 (357)
T ss_pred             ccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEecc-C--------ChhhcC---ccC--ccEEEEeCC
Confidence            999999999999888 7999999999999999999899999988776 3        222222   123  499999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-------CCCcEEEEeccccccCCCcceeEEEEc
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-------~~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      +||||.+++.+++++|.++|++||+++|+||+|..+.+++......       ..+++++++|+||.+|++|+|+||++.
T Consensus       152 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~  231 (357)
T TIGR03539       152 GNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG  231 (357)
T ss_pred             CCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec
Confidence            9999999999999999999999999999999999887754332211       235789999999999889999999998


Q ss_pred             cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeC
Q 015768          247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL  326 (400)
Q Consensus       247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  326 (400)
                      +   +++++.+...+....++++.+.+.++..+|+. ..+..+.+..++++++.+.+.|++.+ +.+..|.+++|+|+++
T Consensus       232 ~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~p~~~~~~~~~~  306 (357)
T TIGR03539       232 D---PALVAELLTVRKHAGLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEKAG-FRIDHSEAGLYLWATR  306 (357)
T ss_pred             C---HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCccEEEEEEC
Confidence            8   78888888777656677899999999999975 46677788888899999999998875 4677788899999998


Q ss_pred             CCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHH
Q 015768          327 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      +.   +..++...| .++||.+.||..|+  .++++||+++. +++++++++++|
T Consensus       307 ~~---~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l  356 (357)
T TIGR03539       307 GE---DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL  356 (357)
T ss_pred             CC---CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence            63   456777766 58999999999875  35799999997 789999998876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=7.2e-43  Score=351.18  Aligned_cols=346  Identities=17%  Similarity=0.179  Sum_probs=281.1

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC---CcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---SSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~---~~i~~~~g~t~a~~~  104 (400)
                      .++++|+|+.|++++++|+.+++++.+.+.+..   +  ..+.+++++++++++++++|++.   ++|++++|+++++..
T Consensus       695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~l  769 (1082)
T PLN02672        695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNK  769 (1082)
T ss_pred             CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHH
Confidence            467999999999999999999999998875532   2  23456789999999999988864   389999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCC-CCCccCCC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG-NPSGTYIP  182 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~-nptG~~~~  182 (400)
                      ++.++++|||+|+++.|+|+.+...++..|++++.+ |.++ +|+.+|.+.+++.++..+ .++|++++|+ ||||.+++
T Consensus       770 ll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~V-pl~~e~gf~lD~d~Le~al~~~~-~~~I~L~nPnhNPTG~v~S  847 (1082)
T PLN02672        770 LVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRI-PTKSSDGFKLTAKTLASTLETVK-KPWVYISGPTINPTGLLYS  847 (1082)
T ss_pred             HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC-CCEEEEECcCCCCcCccCC
Confidence            999999999999999999999999999999999999 8874 579999999999987532 2688999997 99999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-----c----ccC----CCcEEEEeccccccCCCcceeEEEEccCC
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----C----CVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE  249 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~----~~~----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~  249 (400)
                      .+++++|+++|++||++||+||+|..+.+++...     .    ...    ..++++++|+||.++++|+|+||+++++ 
T Consensus       848 ~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~-  926 (1082)
T PLN02672        848 NSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND-  926 (1082)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC-
Confidence            9999999999999999999999999888765321     0    001    1368999999999999999999999874 


Q ss_pred             cHHHHHHHHHhhccCC-cCccHHHHHHHHHHhc-CCc---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEe
Q 015768          250 VEGFATQLLKVQDNIP-ICASIISQHLALYSLQ-TGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  324 (400)
Q Consensus       250 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  324 (400)
                       +++++.+........ ...+..++.++..++. ...   ++..+.++.++++++++.+.|++++. .+..|++++++|+
T Consensus       927 -~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi-~v~~PeGGFfLwl 1004 (1082)
T PLN02672        927 -SVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGW-DVLEPQGGISMVA 1004 (1082)
T ss_pred             -HHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-eEecCCcEEEEEE
Confidence             568888876532111 2223333344343332 122   34567777899999999999999864 7888999999999


Q ss_pred             eCCCC----------------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          325 RLPEK----------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       325 ~~~~~----------------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +++..                ..+..+++.+|+++.||.+.||..|+.++++||+++. +++++++++++|+++..
T Consensus      1005 ~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1005 KPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred             EccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence            76421                1357889999987789999999988888999999996 88999999999998654

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4e-43  Score=332.61  Aligned_cols=338  Identities=21%  Similarity=0.208  Sum_probs=265.5

Q ss_pred             CCeEEcCCCCC-CCCCcHHHHHHHHHhh----cCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEE--EeCChHH
Q 015768           30 KNAVSLAQGVV-YWQPPKMAMEKVKELV----WDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVM--VTAGANQ  100 (400)
Q Consensus        30 ~~~i~~~~~~~-~~~~~~~v~~a~~~~~----~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~--~~~g~t~  100 (400)
                      ++.++|+.|.+ ++.++..+.+++.+++    .......|++..|.+++|+++++++.+..+  +++++|+  .|.|+++
T Consensus        29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~  108 (404)
T PTZ00376         29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG  108 (404)
T ss_pred             cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence            68899999985 4554444444444443    323357899999999999999999976654  4678888  4889999


Q ss_pred             HHHHHHH---HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccC-CCCeEEEEeCCCC
Q 015768          101 AFVNIVL---TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK-PTPKLVSVVNPGN  175 (400)
Q Consensus       101 a~~~~~~---~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~n  175 (400)
                      ++..++.   ++++|||+|++++|+|+.+...++..|++++.+ |.. ++++.+|.+.+++.+... ...+++++++|||
T Consensus       109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~N  187 (404)
T PTZ00376        109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEY-RYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHN  187 (404)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeec-cccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            9988875   567999999999999999999999999999999 884 345778999999988632 2136777789999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cc---c--ccCCCcEEEEeccccccCCCcceeEEE---E
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH---C--CVEGDHVVNLFSFSKAYGMMGWRVGYI---A  245 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~---~--~~~~~~~i~~~s~sK~~g~~g~~~G~i---~  245 (400)
                      |||.+++.+++++|+++|++|++++|+||+|..+.+++.  ..   .  ....+++++++||||.++++|+|+||+   +
T Consensus       188 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~  267 (404)
T PTZ00376        188 PTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVC  267 (404)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEe
Confidence            999999999999999999999999999999999887541  11   1  112357899999999999999999998   4


Q ss_pred             ccCCcHHHHHHH----HHhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHHHHHHHHHhccCCC---Cc
Q 015768          246 YPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIREALSPLGE---GA  312 (400)
Q Consensus       246 ~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~~~---~~  312 (400)
                      .+   +++.+++    .........+++.+.|.++..+|+++.   +|   .++.+++++++++.+.+.|++++.   +.
T Consensus       268 ~~---~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~  344 (404)
T PTZ00376        268 AN---KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWE  344 (404)
T ss_pred             CC---HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence            55   6655443    332222234457789999999998632   22   455567888999999999998742   34


Q ss_pred             ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +..|.+++|+|++++      .+++.+|++++||.+.||.        |++++..+.++++.++++|++++..
T Consensus       345 ~~~p~gg~f~~~~~~------~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~~~~~  403 (404)
T PTZ00376        345 HIINQIGMFSFTGLT------KEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHDVVRN  403 (404)
T ss_pred             ccccCceEEEecCCC------HHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHHHHhc
Confidence            556888999999885      4778889888899999972        9999866899999999999998753

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.5e-43  Score=328.87  Aligned_cols=327  Identities=22%  Similarity=0.291  Sum_probs=275.4

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      ..+.++|+.+.+++++++.+.+++.+.+..   ..|.+..|.+++|+++++++    ++++++|++|+|+++++..++.+
T Consensus        28 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~~  100 (359)
T PRK03158         28 LEKIVKLASNENPYGPSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHL----GVDEEQLLFGAGLDEVIQMISRA  100 (359)
T ss_pred             CCceEEecCCCCCCCCCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHh----CCCHHHEEECCCHHHHHHHHHHH
Confidence            448899999999998899999999887754   23446678899999999998    67889999999999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      +.++||+|++++|+|+.+...++..|.+++.+ |.++  +.+|++.+++.+++++  +++++++|+||||.+++.+++.+
T Consensus       101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~~--~~~d~~~l~~~~~~~~--~~v~i~~p~NPtG~~~~~~~l~~  175 (359)
T PRK03158        101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREV-PLKD--GGHDLEAMLKAIDEQT--KIVWICNPNNPTGTYVNHEELLS  175 (359)
T ss_pred             HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEE-ecCC--CCcCHHHHHHhcCCCC--CEEEEeCCCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999 8873  3579999998887654  89999999999999999888888


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      +++.|+ +|+++|+||+|..+.+++....    ....+++++++||||.+|++|+|+||++++   +++++.+.....  
T Consensus       176 ~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~~--  249 (359)
T PRK03158        176 FLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS---EELIEKLNIARP--  249 (359)
T ss_pred             HHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC---HHHHHHHHHhcC--
Confidence            888774 6999999999998876542111    113468899999999999999999999998   788888877654  


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      +++++.+++.++..+|+. .++.++..+.++++++.+.+.|++.+ +.+.++ +++|+|++++.   +..++++.|+ ++
T Consensus       250 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~g~~i~~~~~~---~~~~~~~~l~-~~  322 (359)
T PRK03158        250 PFNTTRIAQYAAIAALED-QAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPS-QTNFIFVDTGR---DANELFEALL-KK  322 (359)
T ss_pred             CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCC-cCcEEEEECCC---CHHHHHHHHH-HC
Confidence            467899999999999975 56777888888888889999998875 355544 47899999852   5678888886 68


Q ss_pred             CeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       345 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      ||.+.||..|+.++++||+++  +.++.+.++++|+++
T Consensus       323 gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~  358 (359)
T PRK03158        323 GYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL  358 (359)
T ss_pred             CeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence            999999998887899999998  488888888888764

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1e-42  Score=323.99  Aligned_cols=328  Identities=17%  Similarity=0.299  Sum_probs=273.0

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      ++.++|+.+.++.++|+.+++++.+.+..  ...|+ ..+..++|+++++++    ++++++|++|+|+++++..++.++
T Consensus        19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~~~   91 (354)
T PRK06358         19 NMILDFSANINPLGVPESLKQAITENLDK--LVEYP-DPDYLELRKRIASFE----QLDLENVILGNGATELIFNIVKVT   91 (354)
T ss_pred             cceEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCC-CccHHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHHh
Confidence            45799999998888899999999887754  55685 456789999999998    788999999999999999999987


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                       .+ ++|+++.|+|+.+...++..|++++.+ |.++ +++.+| +++.+.+..+  ++++++++|+||||.+++.+++++
T Consensus        92 -~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d-~~~~~~~~~~--~~~v~~~~P~NPtG~~~~~~~~~~  165 (354)
T PRK06358         92 -KP-KKVLILAPTFAEYERALKAFDAEIEYA-ELTEETNFAAN-EIVLEEIKEE--IDLVFLCNPNNPTGQLISKEEMKK  165 (354)
T ss_pred             -CC-CcEEEecCChHHHHHHHHHcCCeeEEE-eCccccCCCcc-HHHHHhhccC--CCEEEEeCCCCCCCCccCHHHHHH
Confidence             34 689999999999999999999999999 8864 457788 6666656544  499999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      |+++|++||+++|+||+|..+.+++....    ....+++++++||||.+|++|+|+||++.++  +.+++.+.....  
T Consensus       166 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~--~~~~~~~~~~~~--  241 (354)
T PRK06358        166 ILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN--KNLAEKLLQMRE--  241 (354)
T ss_pred             HHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhCC--
Confidence            99999999999999999999887653221    1234689999999999999999999998864  677788877654  


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      .++.+.+.+.++..+++. .+++.+.++.++++++.+.+.|+++++..+..+. ++|+|++++.    ..++++.++ ++
T Consensus       242 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~~----~~~~~~~l~-~~  314 (354)
T PRK06358        242 PWSINTFADLAGQTLLDD-KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS-VNFIFFKLEK----PIDLRKELL-KK  314 (354)
T ss_pred             CCcchHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc-ceEEEEEcCc----hHHHHHHHH-HC
Confidence            567889999999999974 4667888888999999999999988666667676 6799999974    468888876 68


Q ss_pred             CeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       345 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ||.+.+|..|+.  ++++||+++.  +++.+++++.|.+.+
T Consensus       315 gI~v~~~~~f~~~~~~~iRls~~~--~~~~~~l~~~l~~~~  353 (354)
T PRK06358        315 GILIRSCSNYRGLDENYYRVAVKS--REDNKKLLKALEVIL  353 (354)
T ss_pred             CeEEEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence            999999998843  5789999985  777777777776654

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=2.7e-42  Score=328.93  Aligned_cols=349  Identities=18%  Similarity=0.261  Sum_probs=269.0

Q ss_pred             CCeEEcCCCCCCC-CCc-HHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768           30 KNAVSLAQGVVYW-QPP-KMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA  101 (400)
Q Consensus        30 ~~~i~~~~~~~~~-~~~-~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a  101 (400)
                      ++.|+|+.|.++. +.+ ..+.+++.+.+...    ....|++..|.+++|+++++++.+.+|  +++++|++|+|++++
T Consensus        30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a  109 (416)
T PRK09440         30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA  109 (416)
T ss_pred             CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence            6789999999775 333 34555666665542    235798889999999999999988775  578999999999999


Q ss_pred             HHHHHHHhcC-----CCCEEEE-eCCCccchhHHHHhcCc----EEEEeccCCCC--CCCCCHHHHHHhhccCCCCeEEE
Q 015768          102 FVNIVLTLCD-----AGDSVVM-FAPYYFNSYMSFQMTGV----THILVGPCSSK--TLHPDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus       102 ~~~~~~~l~~-----~gd~vlv-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~--~~~~~~e~l~~~l~~~~~~~~v~  169 (400)
                      +..++.++++     +||.|++ ..|+|+++...++..+.    ....+ +.+.+  ++.+|++.++  +..+  +++++
T Consensus       110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~l~--~~~~--~~~i~  184 (416)
T PRK09440        110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIE-LLPEGQFKYHVDFEHLH--IDED--TGAIC  184 (416)
T ss_pred             HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccc-cccccccccCCCHHHcc--cCCC--ceEEE
Confidence            9999999984     6899999 79999998876554432    12223 34333  3568888887  3333  48999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768          170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       170 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      +++||||||.+++.+++++|+++|++||+++|+||+|..+.....  .......+++++++||||. +++|+|+||++.+
T Consensus       185 l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~  263 (416)
T PRK09440        185 VSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIAD  263 (416)
T ss_pred             EecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCC
Confidence            999999999999999999999999999999999999975432110  0001124688999999996 7899999999998


Q ss_pred             CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHH-HHHHHHHHHHHHHHHhccC-CC--CcccCCCCceE
Q 015768          248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSPL-GE--GAVKGGEGAIY  321 (400)
Q Consensus       248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~L~~~-~~--~~~~~~~~~~~  321 (400)
                         +++++++.........+++.+.|.++..+++.+.  .+..+ +++.++++++.+++.|++. +.  +.+..|.+++|
T Consensus       264 ---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~f  340 (416)
T PRK09440        264 ---EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIF  340 (416)
T ss_pred             ---HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceE
Confidence               7899998887766667789999999999998743  22223 4555677777777777653 22  35567888999


Q ss_pred             EEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---------CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          322 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      +|++++....+..++...+ .++||.+.||..|..         .+++||+++. +++++++++++|++++++..++
T Consensus       341 iw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~~~~~~~~~  415 (416)
T PRK09440        341 LWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAEEVEKAYAE  415 (416)
T ss_pred             EEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHHHHHHHhhc
Confidence            9999986323567888876 589999999998742         2589999986 8999999999999999886654

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.2e-42  Score=322.48  Aligned_cols=330  Identities=18%  Similarity=0.238  Sum_probs=267.6

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      +.++++|+.+.+++++|+.+++++.+.+..  ...|+ ..+..++|+++++++    ++++++|++|+|+++++..++.+
T Consensus        19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~--~~~y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~~   91 (356)
T PRK08056         19 PDQLLDFSANINPLGMPVSLKRAIIDNLDC--AERYP-DVEYRHLHQALARHH----QVPASWILAGNGETESIFAVVSG   91 (356)
T ss_pred             hhhEEEeccccCCCCCCHHHHHHHHHHHHh--cccCc-CccHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHHH
Confidence            578999999999999999999999887764  34574 446889999999987    78899999999999999999998


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      + .+|+ +++..|+|..+...++..|++++.+ |.++ +++.++ +.+++.+.+++  |++++++|+||||.+++.++++
T Consensus        92 l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~-~~~~~~~~~~~--k~v~l~~p~NPTG~~~~~~~~~  165 (356)
T PRK08056         92 L-KPRR-AMIVTPGFAEYRRALQQVGCEIRRY-SLREADGWQLT-DAILEALTPDL--DCLFLCTPNNPTGLLPERQLLQ  165 (356)
T ss_pred             h-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEE-ecccccCCCcc-HHHHHhccCCC--CEEEEeCCcCCCCCCCCHHHHH
Confidence            7 5776 6778999999999999999999999 8764 466666 34555565444  8999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      +|+++|++|++++|+||+|.++.+++...  .....+++++++|+||.+|++|+|+||++.++  +++.+.+....  ..
T Consensus       166 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~--~~~~~~l~~~~--~~  241 (356)
T PRK08056        166 AIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD--DAAVARMRRQQ--MP  241 (356)
T ss_pred             HHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhC--CC
Confidence            99999999999999999999887654221  11234688999999999999999999999864  56777776543  35


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  345 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  345 (400)
                      ++++.+.+.++..+++. .++.++.++.++++++++.+.|+.++++.+.++ +++|+|++++.   +..+++..|+ ++|
T Consensus       242 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~l~-~~g  315 (356)
T PRK08056        242 WSINAFAALAGEVILQD-RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER---PDIDLQRALL-TQR  315 (356)
T ss_pred             CchhHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC---ChHHHHHHHH-HCC
Confidence            66788888888888864 577778888899999999999998866555555 58999999874   3567888876 789


Q ss_pred             eEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          346 VVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       346 i~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      |.+.+|..|..  ++++||+++.  .++.+.+++.|++++
T Consensus       316 I~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~~l~~~~  353 (356)
T PRK08056        316 ILIRSCANYPGLDSRYYRVAIRS--AAENERLLAALRNVL  353 (356)
T ss_pred             eEEEECCCCCCCCCCEEEEEEcC--HHHHHHHHHHHHHHH
Confidence            99999998842  4799999985  666666666666543

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.3e-43  Score=325.79  Aligned_cols=328  Identities=22%  Similarity=0.320  Sum_probs=272.1

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~  107 (400)
                      ++++++|+.+++++++|+.+++++.+.+.......|++ .+..++|+++++++    ++++ ++|++|+|+++++..++.
T Consensus        25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~----~~~~~~~I~~t~G~~~~i~~~~~   99 (356)
T PRK04870         25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM----GVPAGADVLLGNGSDELIQLLAL   99 (356)
T ss_pred             CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh----CcCCCCcEEEcCCHHHHHHHHHH
Confidence            46899999999999999999999999887654677865 67899999999998    5554 589999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      ++.++||+|+++.|+|..+...++..|++++.+ |.+++ +.+|++.+++.+.... ++++++++|+||||.+++.++++
T Consensus       100 ~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~-~~~d~~~l~~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~  176 (356)
T PRK04870        100 ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGV-PLTAD-FTLDLPAMLAAIAEHR-PALVFLAYPNNPTGNLFDDADVE  176 (356)
T ss_pred             HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHHHhhcCC-CCEEEEcCCCCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999 88754 5789999999886432 59999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      +|+++|   ++++|+||+|..+............+++++++|+|| ++++|+|+||++++   +++++++.....  .++
T Consensus       177 ~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~---~~~i~~~~~~~~--~~~  247 (356)
T PRK04870        177 RIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH---PAWIAELDKVRP--PYN  247 (356)
T ss_pred             HHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCC---HHHHHHHHHccC--CCc
Confidence            999988   789999999988764321111223467899999999 88899999999998   788888877653  456


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      .+.+.+.++..+++. .+++++.+++++++++.+.+.|++++++.+. +.+++|+|++++    +..++...+ +++||.
T Consensus       248 ~~~~~q~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~l-~~~gI~  320 (356)
T PRK04870        248 VNVLTQATALFALEH-VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP----DAAAVFDGL-KTRGVL  320 (356)
T ss_pred             CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC----CHHHHHHHH-HHCCEE
Confidence            788899888888875 4567788888999999999999988655554 455889999987    356777665 589999


Q ss_pred             EeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          348 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       348 v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +.+|..|+  .++++||+++.  .++.+.++++|.++
T Consensus       321 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~  355 (356)
T PRK04870        321 VKNLSGMHPLLANCLRVTVGT--PEENAQFLAALKAA  355 (356)
T ss_pred             EEECCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHh
Confidence            99998875  36899999984  77777777777654

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-42  Score=325.07  Aligned_cols=326  Identities=24%  Similarity=0.340  Sum_probs=268.4

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      +.++|+|+.|++++++|+.+++++.+. ..  ...|+ ..+..++|+++++++    ++++++|++|+|+++++..++.+
T Consensus        51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~-~~--~~~Yp-~~~~~~lr~~ia~~~----~~~~~~I~~t~Ga~~~i~~~~~~  122 (380)
T PLN03026         51 PEDIVKLDANENPYGPPPEVLEALGNM-KF--PYVYP-DPESRRLRAALAEDS----GLESENILVGCGADELIDLLMRC  122 (380)
T ss_pred             ccceEEccCCCCCCCCCHHHHHHHHhh-Hh--hccCC-CCCHHHHHHHHHHHh----CcChhhEEEcCCHHHHHHHHHHH
Confidence            568999999999999899999887653 11  34474 456788999999987    78899999999999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      +.++||+|++++|+|..+...++..|++++.+ |.++ ++.+|++.+++.+ .+++  ++|++++|+||||.+++.+++.
T Consensus       123 ~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~~~~~~--~~v~l~~P~NPTG~~~~~~~l~  198 (380)
T PLN03026        123 VLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKV-PRTP-DFSLDVPRIVEAVETHKP--KLLFLTSPNNPDGSIISDDDLL  198 (380)
T ss_pred             hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHHHHhccCC--cEEEEeCCCCCCCCCCCHHHHH
Confidence            99999999999999988888888999999999 8754 4678999999988 4554  9999999999999999977777


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  266 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~  266 (400)
                      +|++.+    +++|+||+|..+.+.+.... ....+++++++||||.+|++|+|+||++++   +++++.+.+...  .+
T Consensus       199 ~l~~~~----~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~---~~~i~~l~~~~~--~~  269 (380)
T PLN03026        199 KILELP----ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP---LSIIEYLWRAKQ--PY  269 (380)
T ss_pred             HHHhcC----CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC---HHHHHHHHHhcC--CC
Confidence            777532    89999999998876432221 123578999999999999999999999998   788888887664  56


Q ss_pred             CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      +.+.+.+.++..+|+. .+++++.++.+.++++.+.+.|+++++..+ .|.+++|+|++++.. .+..++...|+ ++||
T Consensus       270 ~~~~~~q~aa~~aL~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~-~~~~~~~~~l~-~~gI  345 (380)
T PLN03026        270 NVSVAAEVAACAALSN-PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG-RDAKKLKEDLA-KMGV  345 (380)
T ss_pred             CCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC-CCHHHHHHHHH-HCCe
Confidence            7889999999999976 577888889999999999999999876444 456699999998753 25778888887 8999


Q ss_pred             EEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          347 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       347 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .++++..++.++++|||++.  .++.+.+++.|++
T Consensus       346 ~v~~~~~~~~~~~lRis~~~--~~~~~~l~~al~~  378 (380)
T PLN03026        346 MVRHYNSKELKGYIRVSVGK--PEHTDALMEALKQ  378 (380)
T ss_pred             EEEECCCCCCCCEEEEecCC--HHHHHHHHHHHHH
Confidence            99998766667899999984  5666666666653

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.6e-42  Score=323.16  Aligned_cols=338  Identities=24%  Similarity=0.280  Sum_probs=278.2

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      ++.+..++|+.|++++++++.+++++.+....  ...|++. +..++|+++++++    ++++++|++|+|+++++..++
T Consensus        29 ~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~----~~~~~~I~it~G~~~~l~~~~  101 (369)
T PRK08153         29 RGRPFRARIGANESGFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH----GVAPENIMVGEGIDGLLGLIV  101 (369)
T ss_pred             cCCcceeEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHH
Confidence            44445679999999999999999999887643  4568654 5789999999987    788999999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      .+++++||.|+++.|+|+.+...++..|.+++.+ |.+.++  ++++.+++.+... ..+++++++|+||||.+++.+++
T Consensus       102 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-p~~~~~--~~~~~l~~~~~~~-~~~~i~l~~P~NPtG~~~~~~~l  177 (369)
T PRK08153        102 RLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTV-PYRDDR--EDLDALLDAARRE-NAPLVYLANPDNPMGSWHPAADI  177 (369)
T ss_pred             HHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEe-eCCCCC--CCHHHHHHHhccc-CCcEEEEeCCCCCCCCCCCHHHH
Confidence            9999999999999999999998888899999999 876553  5888887766432 24899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      .++++.|+ +++++|+||+|..+.+++.... ....+++++++||||.+|++|+|+||++++   +++++.+.....  .
T Consensus       178 ~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~---~~~~~~l~~~~~--~  251 (369)
T PRK08153        178 VAFIEALP-ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA---PGTIKAFDKVRN--H  251 (369)
T ss_pred             HHHHHhCC-CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecC---HHHHHHHHHhhc--C
Confidence            99999887 5999999999998876543211 113467899999999999999999999998   788888877664  4


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  345 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  345 (400)
                      ++.+.+.+.++..+|++ .++.++.++.++++++.+.+.|++.+. .+. |.+++|+|++++.......++..++. ++|
T Consensus       252 ~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~-~~G  327 (369)
T PRK08153        252 FGMNRIAQAAALAALKD-QAYLAEVVGKIAAARDRIAAIARANGL-TPL-PSATNFVAIDCGRDGAFARAVLDGLI-ARD  327 (369)
T ss_pred             CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccC-CCcCcEEEEECCCCcccHHHHHHHHH-HCC
Confidence            67899999999999975 577888888999999999999988764 444 55689999998643234677888776 789


Q ss_pred             eEEe-CCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          346 VVVI-PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       346 i~v~-~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      |.+. |+.. ..++++|++++  ++++++.+++.|++++..+.+
T Consensus       328 i~v~~p~~~-~~~~~iRis~~--~~~~~~~~~~al~~~~~~~~~  368 (369)
T PRK08153        328 IFVRMPGVA-PLDRCIRVSCG--PDEELDLFAEALPEALEAARK  368 (369)
T ss_pred             eEEeeCCCC-CCCCeEEEecC--CHHHHHHHHHHHHHHHHHhhc
Confidence            9995 6542 24679999998  589999999999998876543

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=3e-43  Score=330.30  Aligned_cols=340  Identities=29%  Similarity=0.472  Sum_probs=284.4

Q ss_pred             CeEEcCCCCCCCC----CcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCC-cEEEeCChHHHH
Q 015768           31 NAVSLAQGVVYWQ----PPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKS-SVMVTAGANQAF  102 (400)
Q Consensus        31 ~~i~~~~~~~~~~----~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~-~i~~~~g~t~a~  102 (400)
                      ++|+|+.+++...    +++++++++.+ .........|++..|.+.+++++++++.+..+  ++++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            6899999998876    55666666654 23333377899999999999999999986665  4577 899999999999


Q ss_pred             HHHHHHh-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccC---C-CCeEEEEeCCCCC
Q 015768          103 VNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK---P-TPKLVSVVNPGNP  176 (400)
Q Consensus       103 ~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~---~-~~~~v~l~~p~np  176 (400)
                      ..+...+ .++||+|+++.|+|+.+...++..|.+++.+ |.+ ++++.+|++++++.+++.   . .++++++++|+||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nP  160 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPV-PLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNP  160 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEE-EEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeec-cccccccccccccccccccccccccccccceeeecccccc
Confidence            9999999 7899999999999999999999999999988 754 345678999999998852   1 2589999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-----cccCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  251 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~  251 (400)
                      ||.+++.+++++|+++|++||+++|+||+|..+.++....     .......++++.|+||.+|++|+|+||++.+   +
T Consensus       161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~---~  237 (363)
T PF00155_consen  161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP---P  237 (363)
T ss_dssp             TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE---H
T ss_pred             cccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch---h
Confidence            9999999999999999999999999999999999875421     1223445899999999999999999999997   8


Q ss_pred             HHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768          252 GFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  328 (400)
Q Consensus       252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  328 (400)
                      ++++.+.........  +.+.+.++..++....   ++..++++.++++++.+.+.|++.+ +.+..+.+++|+|+.++.
T Consensus       238 ~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~  314 (363)
T PF00155_consen  238 ELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIG-ITVLPPEAGFFLWVRLDP  314 (363)
T ss_dssp             HHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEHHSBSSEEEEEESH
T ss_pred             hhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhh-hheeeccCccEEEEEccc
Confidence            899998887764443  7888888888887633   2788899999999999999999885 477777789999999875


Q ss_pred             CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768          329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      .  +..+++++|++++||.+.||..|+.++++|++++..+++++++++++|
T Consensus       315 ~--~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  315 N--DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             H--HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             c--hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            3  467899999866699999999998899999999447999999999886

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.9e-42  Score=321.90  Aligned_cols=330  Identities=23%  Similarity=0.320  Sum_probs=270.3

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      ..+.++++|+.+.+++.+++.+.+++.+....  ...|++..| ..+|+++++++    ++++++|++|+|+++++..++
T Consensus        33 ~~~~~~i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~  105 (371)
T PRK05166         33 YGVPRIAKLGSNENPLGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART----GVPADRIILGNGSEDLIAVIC  105 (371)
T ss_pred             cCCcceEEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHH
Confidence            35668999999999988889999988775443  556877777 48999999887    788899999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      .++.++||+|+++.|+|+.+...++..|++++.+ +.+++ +.++++++++.+++++  +++++++|+||||.+++.+++
T Consensus       106 ~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~~  181 (371)
T PRK05166        106 RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERV-TVTPD-LGFDLDALCAAVARAP--RMLMFSNPSNPVGSWLTADQL  181 (371)
T ss_pred             HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHhhhcCC--CEEEEeCCCCCCCCCCCHHHH
Confidence            9999999999999999999999999999999999 88654 4679999999887665  899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCccc-----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  261 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~  261 (400)
                      ++|+++|+ +++++|+||+|..+.+++.....     ...+++++++||||.+|++|+|+||++.++  +++.+.+....
T Consensus       182 ~~l~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~--~~l~~~~~~~~  258 (371)
T PRK05166        182 ARVLDATP-PETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD--PELVGLLDRVR  258 (371)
T ss_pred             HHHHHhCC-CCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC--HHHHHHHHHhc
Confidence            99999886 48999999999988864321111     123578999999999999999999987643  78888887655


Q ss_pred             ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      .  .++++.+.+.++..++.. .+++++.++.+.++++.+.+.|++.+. .+. +.+++|+|++++.   +..++..+++
T Consensus       259 ~--~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-p~~g~fl~~~~~~---~~~~l~~~l~  330 (371)
T PRK05166        259 T--PFNVNGAAQAAALAALDD-EEHLAKGVALALAERERLKKELAEMGY-RIA-PSRANFLFFDARR---PASAVAEALL  330 (371)
T ss_pred             c--CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-eeC-CCcCCEEEEeCCC---CHHHHHHHHH
Confidence            3  566788999888888875 477888888899999999999998854 554 4458999999763   4678888887


Q ss_pred             HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          342 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                       ++||.+.||..++.++++||+++.  .++.+.+.+.|+.
T Consensus       331 -~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~  367 (371)
T PRK05166        331 -RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDK  367 (371)
T ss_pred             -HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHH
Confidence             679999999877678999999996  4444444444443

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-41  Score=316.24  Aligned_cols=326  Identities=23%  Similarity=0.321  Sum_probs=262.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      +..++|+.|.+++++|+.+++++.+.+.......|++ .+.+++|+++++++    ++++++|++|+|+++++..++.++
T Consensus        22 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~----~~~~~~i~it~G~~~~l~~~~~~l   96 (351)
T PRK14807         22 PYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYC----SVVPTNIFVGNGSDEIIHLIMLAF   96 (351)
T ss_pred             CceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHh----CCCcccEEEecCHHHHHHHHHHHh
Confidence            4679999999999999999999998876544566854 45788999999987    788999999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      +++||+|+++.|+|..+...++..|++++.+ +.+++ +.+|++.+++.++.. .+|+|++++|+||||.+++.+++.+ 
T Consensus        97 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~-~~k~v~l~~p~NPtG~~~~~~~l~~-  172 (351)
T PRK14807         97 INKGDVVIYPHPSFAMYSVYSKIAGAVEIPV-KLKED-YTYDVGSFIKVIEKY-QPKLVFLCNPNNPTGSVIEREDIIK-  172 (351)
T ss_pred             cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHHhhcc-CCCEEEEeCCCCCCCCCCCHHHHHH-
Confidence            9999999999999998888889999999999 87654 568999999988742 2499999999999999999555555 


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  268 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~  268 (400)
                        +|++++.++|+||+|..+. +..... ....+++++++||||.+|++|+|+||++.+   +++++.+.....  .+..
T Consensus       173 --l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~---~~~~~~~~~~~~--~~~~  244 (351)
T PRK14807        173 --IIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN---ENILKYLNLVKS--PYNI  244 (351)
T ss_pred             --HHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecC---HHHHHHHHHccC--CCCc
Confidence              4556778899999998763 322111 223468999999999999999999999998   888888876654  4567


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                      +.+.|.++..+++.  .++.+..+.+.++++.+.+.|++++++.+.++ +++|+|++++    +.++++..+. ++||.+
T Consensus       245 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-~~~~~~i~~~----~~~~~~~~l~-~~gV~v  316 (351)
T PRK14807        245 NSLSQVIALKVLRT--GVLKERVNYILNERERLIKELSKIPGIKVYPS-KTNFILVKFK----DADYVYQGLL-ERGILV  316 (351)
T ss_pred             CHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC-CccEEEEEcC----CHHHHHHHHH-HCCEEE
Confidence            88999999999974  45677777888888899999988755566544 5889999997    3667777775 789999


Q ss_pred             eCCCc-cCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          349 IPGGA-CGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       349 ~~g~~-~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      .++.. ++.++++||+++.  .++.+.+++.|+++
T Consensus       317 ~~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~  349 (351)
T PRK14807        317 RDFSKVEGLEGALRITVSS--CEANDYLINGLKEL  349 (351)
T ss_pred             EECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHh
Confidence            87653 3457899999985  56666666666554

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.1e-42  Score=319.11  Aligned_cols=329  Identities=20%  Similarity=0.270  Sum_probs=268.2

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      ++++|+|+.+.+++++++.+.+++.+.+... ...|+ ..+.+++|+++++++    ++++++|++|+|+++++..++++
T Consensus        23 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-~~~y~-~~~~~~lr~aia~~~----~~~~~~I~it~G~~~al~~~~~~   96 (353)
T PRK05387         23 LAKLIKLNTNENPYPPSPKVLEAIRAALGDD-LRLYP-DPNADALRQAIAAYY----GLDPEQVFVGNGSDEVLAHAFLA   96 (353)
T ss_pred             ccceeeccCCCCCCCCCHHHHHHHHHHhhhh-hhcCC-CCcHHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHH
Confidence            4678999999999988999999998877643 45685 446789999999998    68899999999999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      +.++||+|++++|+|+.+...++..|++++.+ |.+++ +.+|++.+++    .  .+++++++||||||.++|.+++.+
T Consensus        97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~----~--~~~v~~~~P~NPtG~~~~~~~~~~  168 (353)
T PRK05387         97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEI-PLDDD-FSIDVEDYLR----P--NGGIIFPNPNAPTGIALPLAEIER  168 (353)
T ss_pred             hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEe-ecCCC-CCCCHHHHHh----c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            99999999999999988888889999999999 88654 5689888863    2  378899999999999999888888


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC-CcC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PIC  267 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~-~~~  267 (400)
                      |++.++  ++++|+||+|..+............+++++++|+||.+|++|+|+||++.+   +++++++....... .++
T Consensus       169 l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~---~~~~~~l~~~~~~~~~~~  243 (353)
T PRK05387        169 ILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH---PELIEALNRVKNSFNSYP  243 (353)
T ss_pred             HHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC---HHHHHHHHHhhccCCCCC
Confidence            887543  999999999987632111111123467899999999999999999999988   78888888776432 467


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      ++.+.+.++..++.. .++.++.++++.++++.+.+.|++++. .+. +.+++|+|++++.  .+..++.+.|. ++||.
T Consensus       244 ~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~  317 (353)
T PRK05387        244 LDRLAQAGAIAAIED-EAYFEETRAKVIATRERLVEELEALGF-EVL-PSKANFVFARHPS--HDAAELAAKLR-ERGII  317 (353)
T ss_pred             cCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eEC-CCcCcEEEEECCC--CCHHHHHHHHH-HCCEE
Confidence            889999999888875 466778888899999999999998864 554 4458899999874  35778888875 78999


Q ss_pred             EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          348 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       348 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +.+......++++|++++  +.+++++++++|++++.
T Consensus       318 v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        318 VRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA  352 (353)
T ss_pred             EEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence            975433334679999998  47899999999988764

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2e-41  Score=317.98  Aligned_cols=332  Identities=23%  Similarity=0.327  Sum_probs=275.7

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      ++.++++|+.+.+++++++.+++++.+....  ...|+.. +..++|+++++++    ++++++|++|+|+++++..++.
T Consensus        30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~  102 (367)
T PRK02731         30 GIADIIKLASNENPLGPSPKAIEAIRAAADE--LHRYPDG-SGFELKAALAEKF----GVDPERIILGNGSDEILELLAR  102 (367)
T ss_pred             CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-cHHHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence            6678999999999888889999999888754  4567544 3468999999987    7888999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      ++.++||+|+++.|+|..+....+..|++++.+ |.+  ++.+|++.+++.+++++  ++|++++|+||||.+++.+++.
T Consensus       103 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~--~~~~~~~~l~~~~~~~~--~~v~l~~p~nptG~~~~~~~l~  177 (367)
T PRK02731        103 AYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEV-PAK--DYGHDLDAMLAAVTPRT--RLVFIANPNNPTGTYLPAEEVE  177 (367)
T ss_pred             HhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEe-ccc--CCCCCHHHHHHHhCCCC--cEEEEeCCCCCCCcCCCHHHHH
Confidence            999999999999999988888888899999988 774  34679999999887554  9999999999999999988888


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      ++++.|+ +|+++|+||+|..+.+.+.....    ...+++++++|+||.+|++|+|+||++++   +++++.+..... 
T Consensus       178 ~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~---~~~~~~l~~~~~-  252 (367)
T PRK02731        178 RFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP---PEIIDALNRVRQ-  252 (367)
T ss_pred             HHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC---HHHHHHHHHccC-
Confidence            8888775 69999999999887764422111    12467899999999999899999999998   788888887654 


Q ss_pred             CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768          264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                       .++.+.+++.++..+++. .++.++.++.++++++.+.+.|++.+. .+.+ .+++|+|++++.. .+..+++..|. +
T Consensus       253 -~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~g~~~~i~~~~~-~~~~~~~~~L~-~  326 (367)
T PRK02731        253 -PFNVNSLALAAAVAALDD-DAFVEKSRALNAEGMAWLTEFLAELGL-EYIP-SVGNFILVDFDDG-KDAAEAYQALL-K  326 (367)
T ss_pred             -CCCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCC-CCceEEEEECCCC-CCHHHHHHHHH-H
Confidence             456788999999999975 567788888889999999999998854 5553 4589999999543 36788888876 7


Q ss_pred             cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +||.+.++..|+.++++|++++  +.++++.+++.|+++++
T Consensus       327 ~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        327 RGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA  365 (367)
T ss_pred             CCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence            8999999988766789999997  47888888888888764

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=1.4e-41  Score=317.66  Aligned_cols=311  Identities=17%  Similarity=0.197  Sum_probs=252.5

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .+.++|+.+.+++++|+.+++++.+.+..  ...|++. +..++|+++++++    ++++++|++|+|+++++..++.++
T Consensus        22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~~~I~it~G~~~~i~~~~~~l   94 (360)
T PRK07392         22 DAILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH----QLPPEWILPGNGAAELLTWAGREL   94 (360)
T ss_pred             ccEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHHHh
Confidence            46899999999999999999998887764  5668654 4678999999998    788999999999999999999987


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCC-C---CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-L---HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~---~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      . +||+|++++|+|+.+...++..|++++.+ |.++++ +   ..+++.+++.. ..  .+++++++||||||.+++.++
T Consensus        95 ~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~l~nP~NPTG~~~~~~~  169 (360)
T PRK07392         95 A-QLRAVYLITPAFGDYRRALRAFGATVKEL-PLPLDQPSPGLTLRLQTLPPQL-TP--NDGLLLNNPHNPTGKLWSREA  169 (360)
T ss_pred             C-CCCeEEEECCCcHHHHHHHHHcCCeEEEE-ecccccCCcccccCHHHHHHhc-cC--CCEEEEeCCCCCCCCCcCHHH
Confidence            5 68899999999999999999999999999 887554 2   23555555432 22  489999999999999999555


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  261 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~  261 (400)
                         |.++++++++ +|+||+|..+.+++....    ....+++++++||||.+|++|+|+||++.+   +++++.+....
T Consensus       170 ---l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~---~~~~~~~~~~~  242 (360)
T PRK07392        170 ---ILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH---PDRLQRWQQWR  242 (360)
T ss_pred             ---HHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC---HHHHHHHHhhC
Confidence               5555667875 677999999887543211    123467999999999999999999999998   78888887655


Q ss_pred             ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      .  .++++.+.|.++..+|++ .++.++..+.++++++++.+.|+.++++.+.. .+++|+|++++.   +..+++.+++
T Consensus       243 ~--~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~---~~~~l~~~ll  315 (360)
T PRK07392        243 D--PWPVNGLAAAAAIAALAD-RDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG---SALQLQEKLL  315 (360)
T ss_pred             C--CCCCCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC---CHHHHHHHHH
Confidence            3  577899999999999986 46667777778888999999999886655554 568999999874   5678888877


Q ss_pred             HhcCeEEeCCCccCC--CCeEEEEecc
Q 015768          342 HRHGVVVIPGGACGC--RGHLRISFGG  366 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~--~~~iRi~~~~  366 (400)
                      +++||.+.||..|+.  ++++||+++.
T Consensus       316 ~~~gv~v~pg~~f~~~~~~~iRi~~~~  342 (360)
T PRK07392        316 QQHRILIRDCLSFPELGDRYFRVAVRT  342 (360)
T ss_pred             hhCCEEEEeCCCCCCCCCCEEEEEeCC
Confidence            788999999998863  5799999996

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=1.7e-41  Score=317.04  Aligned_cols=324  Identities=21%  Similarity=0.242  Sum_probs=263.3

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      ++.++|+.+.+++++|+.+++++.+.+..  ...|++. +..++|+++++++    |+++++|++|+|+++++..++.++
T Consensus        43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~e~I~it~Gs~~ai~~~~~~l  115 (370)
T PRK09105         43 EGAVFLNANECPLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE----GLPADHVMAYAGSSEPLNYAVLAF  115 (370)
T ss_pred             CCcEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh----CcChhhEEEcCChHHHHHHHHHHH
Confidence            56899999999999999999999887754  3457544 4788999998876    889999999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      .++||+|++++|+|+.+...++..|.+++.+ |.+++ +.+|++.+++. .++  .+++++++||||||.+++.++++++
T Consensus       116 ~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~-~~~--~~~v~l~nP~NPTG~~~~~~~l~~l  190 (370)
T PRK09105        116 TSPTAGLVTADPTYEAGWRAADAQGAPVAKV-PLRAD-GAHDVKAMLAA-DPN--AGLIYICNPNNPTGTVTPRADIEWL  190 (370)
T ss_pred             cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-cCCCC-CCCCHHHHHhc-CCC--CCEEEEeCCCCCCCcCcCHHHHHHH
Confidence            9999999999999999999999999999999 88654 56899998876 333  4899999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  268 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~  268 (400)
                      ++.|+ +++++|+||+|..+......... ...+++++++||||.+|++|+|+||++++   +++++.+...   ....+
T Consensus       191 ~~~~~-~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~---~~~i~~l~~~---~~~~~  263 (370)
T PRK09105        191 LANKP-AGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR---PDLLAKLARF---GHNPL  263 (370)
T ss_pred             HHhCC-CCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC---HHHHHHHHhc---CCCCc
Confidence            98764 59999999999876532111111 13568899999999999999999999998   7888888765   24557


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                      +.+.+.++..+|.. .+|.++.++.+.++++.+.+.|++++. .+..+.+ .|++++++   .+..+++..|+ ++||.+
T Consensus       264 ~~~~~~aa~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~-~f~~~~~~---~~~~~l~~~L~-~~gI~v  336 (370)
T PRK09105        264 PVPAAAAGLASLRD-PKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQA-NCFMVDVK---RPAKAVADAMA-KQGVFI  336 (370)
T ss_pred             CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCC-cEEEEeCC---CCHHHHHHHHH-HCCcEE
Confidence            88888888888875 578888888999999999999998864 6666764 45567775   25778998887 679999


Q ss_pred             eCCCccC-CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          349 IPGGACG-CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       349 ~~g~~~~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      .  ..|. .++++|++++.  +++++.+++.|++.+
T Consensus       337 ~--~~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~  368 (370)
T PRK09105        337 G--RSWPIWPNWVRVTVGS--EEEMAAFRSAFAKVM  368 (370)
T ss_pred             e--cCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence            3  3343 47899999984  677777777766554

>PLN02368 alanine transaminase

Probab=100.00  E-value=1.6e-41  Score=318.64  Aligned_cols=316  Identities=19%  Similarity=0.335  Sum_probs=254.2

Q ss_pred             HHHHhhhcCc----hHHHHHHHHHhcCCCeEEcCCCCCC--------CC---------------------CcHHHHHHHH
Q 015768            7 LAKRALETEM----PIMVQIQELVRGAKNAVSLAQGVVY--------WQ---------------------PPKMAMEKVK   53 (400)
Q Consensus         7 ~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~--------~~---------------------~~~~v~~a~~   53 (400)
                      +++|+.+...    ....+..++.+.+.++|+|+.|+|+        +.                     .|++.+++..
T Consensus        11 ~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~   90 (407)
T PLN02368         11 LNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK   90 (407)
T ss_pred             cCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence            6667664332    2333444445678899999999986        31                     1444444444


Q ss_pred             Hhhc--CCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchhH
Q 015768           54 ELVW--DPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYM  128 (400)
Q Consensus        54 ~~~~--~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~  128 (400)
                      +.+.  ......|++..|..++|+++++++.+++|  +++++|++|+|+++++..++.++. +|||+|++++|+|+.+..
T Consensus        91 ~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~  170 (407)
T PLN02368         91 HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA  170 (407)
T ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH
Confidence            4432  23366799899999999999999998877  568999999999999999999997 799999999999999999


Q ss_pred             HHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          129 SFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       129 ~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      .++..|.+++.+ |.++ ++|.+|++.+++.+++.    ..+|++++++||||||.+++.+++++|+++|++||++||+|
T Consensus       171 ~~~~~g~~~v~v-~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D  249 (407)
T PLN02368        171 TISLLGGTLVPY-YLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD  249 (407)
T ss_pred             HHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence            999999999999 8765 46789999999988631    13589999999999999999999999999999999999999


Q ss_pred             ccccccccCCC-Cccc-------c-----CCCcEEEEecccccc-CCCcceeEEEEc---cCCcHHHHHHHHHhhccCCc
Q 015768          204 NTYEYFMYDGR-KHCC-------V-----EGDHVVNLFSFSKAY-GMMGWRVGYIAY---PSEVEGFATQLLKVQDNIPI  266 (400)
Q Consensus       204 ~a~~~~~~~~~-~~~~-------~-----~~~~~i~~~s~sK~~-g~~g~~~G~i~~---~~~~~~~~~~l~~~~~~~~~  266 (400)
                      |+|..+.+++. ++..       .     ..+++++++||||.| |++|+|+||++.   +   +++++.+..... ..+
T Consensus       250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~---~~li~~~~~~~~-~~~  325 (407)
T PLN02368        250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP---PKTVEEIYKVAS-IAL  325 (407)
T ss_pred             ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC---HHHHHHHHHHhc-ccC
Confidence            99999998653 2211       1     134789999999998 899999999984   5   788888887643 466


Q ss_pred             CccHHHHHHHHHHhcCCc-------HHH---HHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC
Q 015768          267 CASIISQHLALYSLQTGP-------EWV---TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP  327 (400)
Q Consensus       267 ~~~~~~~~~~~~~l~~~~-------~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  327 (400)
                      +++.+.|.++..+|+...       ++.   .++.+.++++++.+.+.|++++++.+..|+|++|+|++++
T Consensus       326 ~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~  396 (407)
T PLN02368        326 SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK  396 (407)
T ss_pred             CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence            789999999999997431       233   3467888999999999999997778888999999998765

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=1.3e-41  Score=316.87  Aligned_cols=325  Identities=22%  Similarity=0.348  Sum_probs=270.0

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .++|+|+.+++++++|+++++++.++...  ...|+...+ +++|+++++++    ++++++|++++|+++++..++.++
T Consensus        19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~----~~~~~~i~~~~G~~~~l~~~~~~l   91 (346)
T TIGR01141        19 KEVIKLNSNENPFGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY----GVDPEQILLGNGSDEIIELLIRAF   91 (346)
T ss_pred             CceEEccCCCCCCCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh----CcChHHEEEcCCHHHHHHHHHHHh
Confidence            67999999999999999999999988643  456765554 88999999988    677899999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      .++||+|++++|+|+.+...++..|++++.+ |.+++ +.+|++.+++.+.+++  ++|++++|+||||.+++.+++.++
T Consensus        92 ~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~~~~~~--~~v~l~~p~NptG~~~~~~~~~~l  167 (346)
T TIGR01141        92 LEPGDAVLVPPPTYSMYEISAKIHGAEVVKV-PLDED-GQLDLEDILVAIDDKP--KLVFLCSPNNPTGNLLSRSDIEAV  167 (346)
T ss_pred             cCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHHHHhcCCCC--CEEEEeCCCCCCCCCCCHHHHHHH
Confidence            9999999999999988888888999999999 88766 4689999999876555  999999999999999998888888


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  268 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~  268 (400)
                      ++.|+ +++++|+|++|+.+...+..... ...+++++++|+||++|++|+|+||++.+   +++++.+.....  .++.
T Consensus       168 ~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~~~~  241 (346)
T TIGR01141       168 LERTP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN---AEIIDALNKVRA--PFNL  241 (346)
T ss_pred             HHhCC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecC---HHHHHHHHhccC--CCCC
Confidence            88776 79999999999976653221111 12356788999999998899999999998   788888876543  4667


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                      +.+++.++..+++.. .+..+.+++++++++.+++.|++++++.+.+ .+++|+|+.++.   +.+++..+|. ++||.+
T Consensus       242 ~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~---~~~~~~~~L~-~~gI~v  315 (346)
T TIGR01141       242 SRLAQAAAIAALRDD-DFIEKTVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIRFPR---DADALFEALL-EKGIIV  315 (346)
T ss_pred             CHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEecCC---CHHHHHHHHH-HCCeEE
Confidence            889999998888763 4678888999999999999999885556554 458899999874   5778888776 789999


Q ss_pred             eCCCccCC-CCeEEEEeccCCHHHHHHHHHHH
Q 015768          349 IPGGACGC-RGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       349 ~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      .||..|+. ++++|++++  ++++++++++.|
T Consensus       316 ~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l  345 (346)
T TIGR01141       316 RDLNSYPGLPNCLRITVG--TREENDRFLAAL  345 (346)
T ss_pred             EeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence            99987743 789999987  588888888765

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-41  Score=316.03  Aligned_cols=319  Identities=23%  Similarity=0.302  Sum_probs=258.0

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      ...++|+.+++++++++.+        .......|+ ......+++.+++++    |+++++|++|+|+++++..+++++
T Consensus        28 ~~~~~l~~Nenp~~~~~~~--------~~~~~~~Yp-~~~~~~l~~~~a~~~----g~~~~~I~~~~Gs~e~i~~~~~~~   94 (351)
T PRK01688         28 NGDVWLNANEYPTAVEFQL--------TQQTLNRYP-ECQPKAVIENYAAYA----GVKPEQVLVSRGADEGIELLIRAF   94 (351)
T ss_pred             CCceEecCCCCCCCCChhh--------cccccccCC-CCChHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHHh
Confidence            3469999999999877653        111245573 334466666666665    899999999999999999999999


Q ss_pred             cCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 ~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      .++| |+|+++.|+|..+...++..|++++.+ |.+++ +.+|++.+++.+ .++  ++|++++||||||.+++.+++++
T Consensus        95 ~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v-~~~~~-~~~d~~~l~~~~-~~~--~lv~l~nPnNPTG~~~~~~~l~~  169 (351)
T PRK01688         95 CEPGKDAILYCPPTYGMYSVSAETIGVEIRTV-PTLDN-WQLDLPAIADNL-DGV--KVVYVCSPNNPTGNLINPQDLRT  169 (351)
T ss_pred             cCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEe-ecCCC-CCCCHHHHHHhc-cCC--cEEEEeCCCCCCCCCCCHHHHHH
Confidence            9987 999999999999999999999999999 88654 678999999877 344  99999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      |++.|++ +.++|+||+|..|........ ....+++++++||||.||++|+|+||++++   +++++.+.+...  .++
T Consensus       170 l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~---~~~i~~l~~~~~--~~~  243 (351)
T PRK01688        170 LLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN---EEVINLLLKVIA--PYP  243 (351)
T ss_pred             HHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC---HHHHHHHHhccC--CCC
Confidence            9998875 689999999998864322111 123578999999999999999999999988   889888887654  566


Q ss_pred             ccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          268 ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      .+.+.+.++..+|+.. .+++.+.++.+.++++++.+.|++++++....|.+++|+|++++    +.+++.++|+ ++||
T Consensus       244 v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~----~~~~l~~~L~-~~gi  318 (351)
T PRK01688        244 LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT----ASSAVFKSLW-DQGI  318 (351)
T ss_pred             CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHHH-HCCe
Confidence            7888888888888753 36777888888889999999999887654344556899999986    4678888886 7899


Q ss_pred             EEeCCCcc-CCCCeEEEEeccCCHHHHHHHHHHH
Q 015768          347 VVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       347 ~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      .++++..+ +.++++||+++  ++++.+.+++.|
T Consensus       319 ~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al  350 (351)
T PRK01688        319 ILRDQNKQPGLSNCLRITIG--TREECQRVIDAL  350 (351)
T ss_pred             EEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhh
Confidence            99977654 55789999998  478888777766

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-40  Score=313.00  Aligned_cols=331  Identities=24%  Similarity=0.319  Sum_probs=268.9

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~  106 (400)
                      ..++|+.+.+++++|+.+++++.+.+..  .....|+ ..|.+.+|+++++++.+.+|  +++++|++|+|+++++..++
T Consensus        27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~  105 (368)
T PRK03317         27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLL  105 (368)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHH
Confidence            4699999999999999999999988753  2356784 56889999999999988875  56899999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      .+++++||.|+++.|+|+.+...++..|.+++.+ +.+ +++.+|++.+++.+.... ++++++++|+||||.+++.+++
T Consensus       106 ~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~-~~~i~l~~p~NPtG~~~~~~~l  182 (368)
T PRK03317        106 QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEG-PRA-ADFTLDVDAAVAAIAEHR-PDVVFLTSPNNPTGTALPLDDV  182 (368)
T ss_pred             HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEc-ccC-CCCCCCHHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHH
Confidence            9999999999999999999999999999998888 654 346789999999887432 4899999999999999997777


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCcc-c--cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-C--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      ++|++.|   ++++|+||+|..+.+.+.... .  ...+++++++||||.+|++|+|+||++++   +++++.+..... 
T Consensus       183 ~~l~~~~---~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~---~~~~~~l~~~~~-  255 (368)
T PRK03317        183 EAILDAA---PGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA---PAVVDALRLVRL-  255 (368)
T ss_pred             HHHHHHC---CceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC---HHHHHHHHhcCC-
Confidence            7776655   799999999998876543211 1  12357899999999999899999999998   888888876653 


Q ss_pred             CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768          264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                       +++.+++.+.++..+|+. .++..+.++++.++++.+.+.|++.+. .+..+.+++++|..++    +..++...+. +
T Consensus       256 -~~~~s~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~----~~~~~~~~l~-~  327 (368)
T PRK03317        256 -PYHLSAVTQAAARAALRH-ADELLASVAALRAERDRVVAWLRELGL-RVAPSDANFVLFGRFA----DRHAVWQGLL-D  327 (368)
T ss_pred             -CCCCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EeCCCCCcEEEEeccC----CHHHHHHHHH-H
Confidence             677889999999999986 344455667788888889999988764 6677776777776654    4667777775 7


Q ss_pred             cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +||.+.+.   +.++++||+++  +.++++.+++.|.+++..
T Consensus       328 ~Gv~v~~~---~~~~~iRi~~~--~~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        328 RGVLIRDV---GIPGWLRVTIG--TPEENDAFLAALAEVLAT  364 (368)
T ss_pred             CCEEEEeC---CCCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence            89999874   34789999997  477888888888877654

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.8e-40  Score=311.03  Aligned_cols=326  Identities=21%  Similarity=0.339  Sum_probs=263.5

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEE-eCChHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV-TAGANQAFVNIV  106 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~-~~g~t~a~~~~~  106 (400)
                      ++.++++|+.++++++++|.+++++.+.+..  ...|+.. ..+++++++++++    +++++++++ ++|+++++..++
T Consensus        32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~~~~Ga~~~i~~~~  104 (361)
T PRK00950         32 DPESIIKLGSNENPLGPSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYT----GVPVENIIVGGDGMDEVIDTLM  104 (361)
T ss_pred             CccceEEccCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHh----CCCHHHEEEeCCCHHHHHHHHH
Confidence            3458999999999999899999998887764  3457544 3488999999987    788899999 788899999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      .++.++||+|+++.|+|+.+...++..|++++.+ |.++ ++.++++.+++.+..++  +++++++|+||||.+++   .
T Consensus       105 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~-~~~~~~~~l~~~~~~~~--~~v~~~~p~nptG~~~~---~  177 (361)
T PRK00950        105 RTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYA-KREE-DFSLDVDSVLNAITEKT--KVIFLCTPNNPTGNLIP---E  177 (361)
T ss_pred             HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHHHhccCC--CEEEEeCCCCCCCCCcC---H
Confidence            9999999999999999998888889999999998 7543 45689999999887554  89999999999999999   4


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  266 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~  266 (400)
                      +++.++|+++|+++|+|++|..+............+++++++|+||.+|++|+|+||++++   +++++.+.....  .+
T Consensus       178 ~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~--~~  252 (361)
T PRK00950        178 EDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP---EWLIDYYMRAKT--PF  252 (361)
T ss_pred             HHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC---HHHHHHHHHhcC--CC
Confidence            5566667788999999999987752111111123467899999999999999999999998   788888877654  45


Q ss_pred             CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      +.+.+.+.++..+++. .+++++..+.++++++.+.+.|+    +.+. +.+++|+|++++.  .+..+++.+|. ++||
T Consensus       253 ~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~--~~~~~~~~~l~-~~gv  323 (361)
T PRK00950        253 SLTRLSQAAAIAALSD-KEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTP--MTAKEFCEELL-KRGV  323 (361)
T ss_pred             CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCC--CCHHHHHHHHH-HCCE
Confidence            5788899888888875 46677777888888888888886    2343 4458999999943  36888998886 6899


Q ss_pred             EEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          347 VVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       347 ~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      .+.||..|.  .++++|++++  +.++++++++.|++++
T Consensus       324 ~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il  360 (361)
T PRK00950        324 IVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV  360 (361)
T ss_pred             EEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence            999988774  3579999998  4778899998888765

>PLN02397 aspartate transaminase

Probab=100.00  E-value=3.1e-40  Score=313.57  Aligned_cols=356  Identities=19%  Similarity=0.194  Sum_probs=262.8

Q ss_pred             hhcCchHHHHHHHHHh--cCCCeEEcCCCC-CCCCCcHH----HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768           12 LETEMPIMVQIQELVR--GAKNAVSLAQGV-VYWQPPKM----AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        12 ~~~~~~~~~~~~~~~~--~~~~~i~~~~~~-~~~~~~~~----v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      .+.....+..+.+.++  .++..++++.|. ++...+|.    +.++....+..+....|++..|.+++|+++++++.+.
T Consensus        28 ~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~  107 (423)
T PLN02397         28 EPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGA  107 (423)
T ss_pred             CcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCC
Confidence            3444445556666654  345678888886 55544443    3333333333333457999999999999999999765


Q ss_pred             cCCC--CCcEEE--eCChH--HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHHHHHH
Q 015768           85 NKLY--KSSVMV--TAGAN--QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEK  157 (400)
Q Consensus        85 ~~~~--~~~i~~--~~g~t--~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~~  157 (400)
                      .+..  .++|..  +.+++  .++...+..+..|||+|++++|+|+.+...++..|++++.+ |. +++++.+|++.+++
T Consensus       108 ~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~l~~~~~~~~d~~~l~~  186 (423)
T PLN02397        108 DSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTY-RYYDPKTRGLDFDGLLE  186 (423)
T ss_pred             CCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEe-ecccCcCCccCHHHHHH
Confidence            4321  233321  23332  33444445555699999999999999999999999999999 87 34456789998888


Q ss_pred             hhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Ccc---cc--CCCcEEEEec
Q 015768          158 TLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHC---CV--EGDHVVNLFS  229 (400)
Q Consensus       158 ~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~---~~--~~~~~i~~~s  229 (400)
                      .+... +..+++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.  +..   ..  ..+++++++|
T Consensus       187 ~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~S  266 (423)
T PLN02397        187 DLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQS  266 (423)
T ss_pred             HHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEE
Confidence            77632 2237777889999999999999999999999999999999999999988541  111   11  2346899999


Q ss_pred             cccccCCCcceeEEEE--ccCCcHHHHH----HHHHhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHH
Q 015768          230 FSKAYGMMGWRVGYIA--YPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVRN  297 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~--~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~  297 (400)
                      |||.++++|+|+||++  ..+  +++++    .+.........+++.+.|.++..+|+.+.   .|   ++++++.++++
T Consensus       267 fSK~~~~~G~RvG~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~r  344 (423)
T PLN02397        267 YAKNMGLYGERVGALSVVCKS--ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISM  344 (423)
T ss_pred             CcccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999985  322  44443    33344333445678889999888887631   23   56778899999


Q ss_pred             HHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHH
Q 015768          298 REIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA  374 (400)
Q Consensus       298 ~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~  374 (400)
                      ++.+.+.|++++.   +.+..|++++|+|++++      ++++.+|++++||.+.++.        |++++..+.+++++
T Consensus       345 r~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~------~~~~~~Ll~~~~V~v~~~~--------Ri~~~~~~~~~i~~  410 (423)
T PLN02397        345 RQKLYDALEARGSPGDWSHITKQIGMFSFTGLN------KEQVDRMTKEYHIYMTRDG--------RISMAGLSSKNVPY  410 (423)
T ss_pred             HHHHHHHHHhcCCCCCCCcccCCceEEEecCCC------HHHHHHHHHhCCEEECCCC--------eEEEeeCCHHHHHH
Confidence            9999999998852   46677999999999885      3588999999999997422        99998669999999


Q ss_pred             HHHHHHHHHH
Q 015768          375 AADRLRRGLE  384 (400)
Q Consensus       375 ~~~~l~~~l~  384 (400)
                      ++++|++++.
T Consensus       411 ~~~~i~~~~~  420 (423)
T PLN02397        411 LADAIHAVVT  420 (423)
T ss_pred             HHHHHHHHHh
Confidence            9999999974

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3e-40  Score=308.49  Aligned_cols=321  Identities=23%  Similarity=0.276  Sum_probs=256.6

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      ..+.++.+.+++++++....         ....|+.. +..++|+++++++    ++++++|++|+|+++++..++.++.
T Consensus        32 ~~~~~~~ne~~~~~~~~~~~---------~~~~Y~~~-~~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~~~   97 (364)
T PRK04781         32 GDVWLNANESAWANPADPDA---------STRRYPDP-QPPGLRSALAALY----GCAPEQLLIGRGSDEAIDLLVRALC   97 (364)
T ss_pred             CCEEeeCCCCCCCCChhhcc---------hhccCCCC-CHHHHHHHHHHHh----CcChHHEEEeCCHHHHHHHHHHHhc
Confidence            46889999988876653111         14557543 4688999999987    7889999999999999999999999


Q ss_pred             CCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          111 DAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       111 ~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      .+| |.|+++.|+|..+...++..|.+++.+ |.+  ++++.+|++.+++.+ .++  +++|++++|+||||.+++.+++
T Consensus        98 ~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~lv~l~~p~NPTG~~~~~~~~  174 (364)
T PRK04781         98 VPGRDAVLVTPPVFGMYAVCARLQNAPLVEV-PLVDGADGFHADVPAIVAAALASN--AKLVFLCSPSNPAGSAIALDQI  174 (364)
T ss_pred             CCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCCCccCCCcCHHHHHHHHhccC--CeEEEEcCCCCCCCCCcCHHHH
Confidence            998 799999999988888888899999999 874  346778888876554 344  4999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      .++++.|+ +++++|+||+|..|.+...... ....+++++++||||.||++|+|+||++.+   +++++.+.+...  .
T Consensus       175 ~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~---~~l~~~l~~~~~--~  248 (364)
T PRK04781        175 ERALQALQ-GKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN---AELIAVLRRCQA--P  248 (364)
T ss_pred             HHHHHhCC-CCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC---HHHHHHHHhccC--C
Confidence            99999885 5899999999998875432111 123578999999999999999999999998   899999887764  5


Q ss_pred             cCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          266 ICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      ++.+.+.+.++..+|+.+. ++..+..+.+.++++.+.+.|+++++.....|.+++|+|++++    +.+++...+. ++
T Consensus       249 ~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~----~~~~~~~~l~-~~  323 (364)
T PRK04781        249 YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD----DAEAAFQALL-AA  323 (364)
T ss_pred             CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHHH-HC
Confidence            6778889999888998753 4566667788889999999999886543334666999999997    3567777664 89


Q ss_pred             CeEEeCCCcc-CCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       345 gi~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      ||.+.+|..| +.++++||+++.  .++.+.+++.|++
T Consensus       324 gI~v~~~~~~~~~~~~~Ris~~~--~~~~~~l~~al~~  359 (364)
T PRK04781        324 GVVVRDQRAAPRLSDALRITLGT--PEQNDRVLAALQR  359 (364)
T ss_pred             CeEEeeCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHH
Confidence            9999999765 356899999985  5666666665554

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=7.3e-40  Score=304.98  Aligned_cols=322  Identities=18%  Similarity=0.240  Sum_probs=258.0

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      ++++++|+.+.+++++|+.+++++.+.+..  ...|++..|..++|+++++++    ++++++|++|+|+++++..++. 
T Consensus        21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~----~~~~~~I~it~Ga~~al~~~~~-   93 (349)
T PRK07908         21 GPGLLDFAVNVRHDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH----GRTPDEVLLLAGAAEGFALLAR-   93 (349)
T ss_pred             CCCeEEecCCCCCCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHh-
Confidence            477999999999999999999999988764  456877789999999999997    7889999999999999999988 


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      + ++ +.+++..|+|..+...++..|.+++.+ |.+++ +.+|++.+    .++  ++++++++|+||||.+++.++   
T Consensus        94 l-~~-~~viv~~P~y~~~~~~~~~~G~~i~~v-~~~~~-~~~d~~~l----~~~--~~~i~l~np~NPTG~~~~~~~---  160 (349)
T PRK07908         94 L-RP-RRAAVVHPSFTEPEAALRAAGIPVHRV-VLDPP-FRLDPAAV----PDD--ADLVVIGNPTNPTSVLHPAEQ---  160 (349)
T ss_pred             c-CC-CeEEEeCCCChHHHHHHHHcCCEEEee-ccCcc-cCcChhHh----ccC--CCEEEEcCCCCCCCCCcCHHH---
Confidence            4 56 467788999999999999999999999 88765 56777654    333  489999999999999999655   


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      |.++|+ ++.++|+||+|..+..+.... .....+++++++|+||.+|++|+|+||++.+   +++++.+.....  .++
T Consensus       161 l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~---~~~~~~~~~~~~--~~~  234 (349)
T PRK07908        161 LLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA---PDVLARLTRGRA--HWP  234 (349)
T ss_pred             HHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecC---HHHHHHHHhcCC--CCC
Confidence            555565 588999999999875432211 1123457899999999999999999999988   788888877654  355


Q ss_pred             ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          268 ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      .+.+.+.++..++.. ..+++++.++.+.++++.+.+.|++++ +.+..|.+++|+|++++.    .+.+...+ +++||
T Consensus       235 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~----~~~~~~~l-~~~gI  308 (349)
T PRK07908        235 VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD----AELLRKRL-RERGI  308 (349)
T ss_pred             ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc----HHHHHHHH-HhCCE
Confidence            667777777777763 336778888899999999999999884 577777789999999984    45566555 68999


Q ss_pred             EEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          347 VVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       347 ~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      .+.||..|.  .++++|||++  ++++++++++.|++.+.
T Consensus       309 ~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        309 AVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK  346 (349)
T ss_pred             EEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence            999999885  3689999997  46777777777766543

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-39  Score=301.27  Aligned_cols=317  Identities=22%  Similarity=0.325  Sum_probs=253.2

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .+++.++|+.|++++++|+.+++++.+.+.......|+ ..+.+++|+++++++++.+ +++++|++|+|+++++..++.
T Consensus        17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~~-~~~~~i~it~Ga~~~i~~~~~   94 (335)
T PRK14808         17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTDF-LSKNNVSVGNGADEIIYVMML   94 (335)
T ss_pred             CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCCC-CCcceEEEcCCHHHHHHHHHH
Confidence            45789999999999999999999998877654344464 4589999999999997653 789999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      ++    |.|++++|+|+.+...++..|++++.+ |.++++ .++.+.    + ..  .+++++++||||||.+++.++++
T Consensus        95 ~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~~-~~~~~~----~-~~--~~~i~i~nP~NPTG~~~s~~~l~  161 (335)
T PRK14808         95 MF----DRSVFFPPTYSCYRIFAKAVGAKFLEV-PLTKDL-RIPEVN----V-GE--GDVVFIPNPNNPTGHVFEREEIE  161 (335)
T ss_pred             Hh----CcEEECCCCHHHHHHHHHHcCCeEEEe-cCCCcC-CCChhH----c-cC--CCEEEEeCCCCCCCCCcCHHHHH
Confidence            88    679999999999999999999999999 887653 333221    2 22  38999999999999999988777


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      +|+    ++++++|+||+|..+............+++++++||||.+|++|+|+||++++   +++++++.....  .++
T Consensus       162 ~l~----~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~---~~~~~~l~~~~~--~~~  232 (335)
T PRK14808        162 RIL----KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSS---EKFIDAYNRVRL--PFN  232 (335)
T ss_pred             HHH----hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeC---HHHHHHHHHhcC--CCC
Confidence            775    47999999999998742111111123468999999999999999999999999   788888877663  567


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      .+.+.+.++..+++. .++..+..+.+.++++.+.+.|++++ +.+..+. +.|+|+.++.  .+..++.+.+. ++||.
T Consensus       233 ~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~-g~f~~~~l~~--~~~~~~~~~l~-~~Gi~  306 (335)
T PRK14808        233 VSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMG-YRITDSR-GNFVFIFMEK--EEKERLLEHLR-AKNIA  306 (335)
T ss_pred             CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC-CeEEEEeCCC--ccHHHHHHHHH-HCCeE
Confidence            788899998888875 45667777788888899999999886 4666665 7888999974  24567777665 89999


Q ss_pred             EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          348 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       348 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      |+.   |  .+++||+++.  .++.+.+++.|++
T Consensus       307 V~~---~--~~~~Risi~~--~~~~~~~~~~l~~  333 (335)
T PRK14808        307 VRS---F--REGVRITIGK--REENDMILKELEV  333 (335)
T ss_pred             EEE---C--CCCeEEecCC--HHHHHHHHHHHHh
Confidence            984   2  4789999985  6766666666653

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-39  Score=301.27  Aligned_cols=318  Identities=21%  Similarity=0.344  Sum_probs=253.4

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      +.+.++|+.+.+++++|+.+++++.+++.......|+ ..|.+.+|+++++++    ++++++|++|+|+++++..++..
T Consensus        17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~   91 (337)
T PRK03967         17 GNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY----GLDAENIAVGNGSDELISYLVKL   91 (337)
T ss_pred             CCceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHHHHH
Confidence            3578999999999998999999999888654456784 578999999999998    68899999999999999998887


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      +  +||+|+++.|+|..+...++..|++++.+ +.+++ +.+|++.+++.+ .++  +++++++|+||||.+++.+++.+
T Consensus        92 ~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~-~~~--~~v~~~~P~NPtG~~~~~~~l~~  164 (337)
T PRK03967         92 F--EGKHIVITPPTFGMYSFYAKLNGIPVIDV-PLKED-FTIDGERIAEKA-KNA--SAVFICSPNNPTGNLQPEEEILK  164 (337)
T ss_pred             h--CCCeEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCcCHHHHHHhc-cCC--CEEEEeCCCCCCCCCCCHHHHHH
Confidence            7  79999999999998888889999999999 87654 568999998765 334  88899999999999999665555


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  268 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~  268 (400)
                      +   + ++++++|+||+|..+............+++++++||||.||++|+|+||++.+   +++++.+.....  .++.
T Consensus       165 i---~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~---~~~i~~~~~~~~--~~~~  235 (337)
T PRK03967        165 V---L-ETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN---EEIIDALYRIKP--PFSL  235 (337)
T ss_pred             H---H-hcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecC---HHHHHHHHhhcC--CCCC
Confidence            4   4 47999999999998753211111123467899999999999999999999998   788888887664  4567


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                      +.+.+.++..+|+. .++..+..+.+.++++.+.+.|.+..     .+.+++|+|++++        +...|. ++||.+
T Consensus       236 ~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~-----~~~~~~~~~~~~~--------~~~~l~-~~gi~v  300 (337)
T PRK03967        236 NILTMKIVRLALDH-YDLIEERIDYIIKERERVRRELGEYA-----YPSDANFLLLKLD--------AYDYLL-ENGIVV  300 (337)
T ss_pred             CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHhccCc-----CCCCCcEEEEhHH--------HHHHHH-HCCEEE
Confidence            89999999999975 45666667777788888888887652     2556899998774        456665 689999


Q ss_pred             eCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          349 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       349 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +++.. ..++++||+++.  .++.+++++.|.++.+.
T Consensus       301 ~~~~~-~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~  334 (337)
T PRK03967        301 RKLSG-RLEGHIRVTVGK--REENDEFIKALKEIKEG  334 (337)
T ss_pred             EeCCC-CCCCeEEEecCC--HHHHHHHHHHHHHHHHh
Confidence            87643 346799999985  56666777777665544

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=3e-39  Score=304.71  Aligned_cols=321  Identities=23%  Similarity=0.256  Sum_probs=249.7

Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCC---CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hc
Q 015768           59 PSISKYGADEGLPELRDALVKKLNQENK-LYK---SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MT  133 (400)
Q Consensus        59 ~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~---~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~  133 (400)
                      ....+|++..|.+++|+++++++.+..+ ..+   ++|++|+|+++++..++.++++|||+|++++|+|+.+...+. ..
T Consensus        35 ~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~  114 (388)
T PRK08637         35 DEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRR  114 (388)
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhc
Confidence            3467899999999999999999877653 322   578999999999999999999999999999999999998765 57


Q ss_pred             CcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-----cCCEEEEcccc
Q 015768          134 GVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-----AGSWLVVDNTY  206 (400)
Q Consensus       134 g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~-----~~~~li~D~a~  206 (400)
                      |++++.+ |...++..+|++.+++.++  .....+++++++||||||.+++.+++++|+++|++     |++++|+||+|
T Consensus       115 g~~vv~v-~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y  193 (388)
T PRK08637        115 GAEIVTY-PIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY  193 (388)
T ss_pred             CCEEEEe-cccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccc
Confidence            9999999 8742333579999998876  22223567777899999999999999999998875     89999999999


Q ss_pred             cccccCCCCcc----c--cCCCcE--EEEeccccccCCCcceeEEEEccC---CcHHHHHHHHHh----hccCCcCccHH
Q 015768          207 EYFMYDGRKHC----C--VEGDHV--VNLFSFSKAYGMMGWRVGYIAYPS---EVEGFATQLLKV----QDNIPICASII  271 (400)
Q Consensus       207 ~~~~~~~~~~~----~--~~~~~~--i~~~s~sK~~g~~g~~~G~i~~~~---~~~~~~~~l~~~----~~~~~~~~~~~  271 (400)
                      .++.+++....    .  ...+++  ++++|+||.++++|+|+||++.++   ..+++.+.+...    .....+++|.+
T Consensus       194 ~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~  273 (388)
T PRK08637        194 FGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHP  273 (388)
T ss_pred             hhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcH
Confidence            99987654321    1  122453  445699999989999999998642   125677766542    12233567899


Q ss_pred             HHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          272 SQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       272 ~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      .|.++..+++.+.  .+..+.+..++++++.+.+.|+..+   .+.+..+.+++|+|++++.  .+..+++.++++++||
T Consensus       274 ~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~--~~~~~l~~~l~~~~gv  351 (388)
T PRK08637        274 SQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG--VDAEELRVHLLEKYGI  351 (388)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh--HHHHHHHHHHhhhcce
Confidence            9999999997532  2234445567777777888887652   3567778889999999973  2567888888777899


Q ss_pred             EEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          347 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       347 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+.+.    .++++||+++..+.+++++++++|.++++++
T Consensus       352 ~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        352 GTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             EEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            98742    4679999999878999999999999999865

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7e-40  Score=305.37  Aligned_cols=318  Identities=22%  Similarity=0.300  Sum_probs=254.2

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .+.++|+.+++++++++.+      ...  ....|+.. +..++++++++++    |+++++|++|+|+++++..++.++
T Consensus        31 ~~~~~l~~ne~~~~~~~~~------~~~--~~~~Yp~~-~~~~Lr~aia~~~----~~~~~~I~it~Gs~~~i~~~~~~~   97 (354)
T PRK04635         31 RGDIWINANESPFNNEYKL------DLA--RLNRYPEC-QPPELINAYSAYA----GVAPEQILTSRGADEAIELLIRAF   97 (354)
T ss_pred             CCcEEeeCCCCCCCCChhh------hhH--HhccCCCC-CHHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHHHHHh
Confidence            4679999999999877643      111  14558544 5789999999986    899999999999999999999999


Q ss_pred             cCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 ~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      .++| |+|+++.|+|+.+...++..|++++.+ |.+++ +.++.+.++. + ++  +++|++++||||||.+++.+++.+
T Consensus        98 ~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v-~~~~~-~~~~~~~l~~-~-~~--~~li~i~nP~NPTG~~~~~~~l~~  171 (354)
T PRK04635         98 CEPGQDSIACFGPTYGMYAISAETFNVGVKAL-PLTAD-YQLPLDYIEQ-L-DG--AKLVFICNPNNPTGTVIDRADIEQ  171 (354)
T ss_pred             cCCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCCC-CCCCHHHHHh-c-cC--CCEEEEeCCCCCCCccCCHHHHHH
Confidence            9998 999999999999998899999999999 88654 5678888863 3 34  499999999999999999888888


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      |++.|+  ++++|+||+|..+....... .....++.++++||||++|++|+|+||++.+   +++++.+.....  .++
T Consensus       172 l~~~~~--~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~---~~~~~~l~~~~~--~~~  244 (354)
T PRK04635        172 LIEMTP--DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLAN---EELIEILMRVIA--PYP  244 (354)
T ss_pred             HHHhCC--CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCC---HHHHHHHHhhcC--CCC
Confidence            888765  59999999999876432111 1123467899999999999999999999998   788888876543  566


Q ss_pred             ccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          268 ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      .+.+.+.++..++... .++..+..+.+.++++.+.+.|++++.+.+.++. ++|+|++++    +..++.+.+ .++||
T Consensus       245 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~----~~~~~~~~l-~~~gv  318 (354)
T PRK04635        245 VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNYVLAKFD----DVDAVFKAL-WDAGI  318 (354)
T ss_pred             CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcEEEEECC----CHHHHHHHH-HHCCE
Confidence            7788888888888752 3556777788888999999999998755666665 789999986    356777655 58999


Q ss_pred             EEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          347 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       347 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .++++..+..++++|||++  +.++++.++++|++
T Consensus       319 ~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~  351 (354)
T PRK04635        319 VARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN  351 (354)
T ss_pred             EEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence            9987654445789999997  47888777777754

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.2e-39  Score=298.14  Aligned_cols=310  Identities=18%  Similarity=0.268  Sum_probs=242.9

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      ++++|+.++++++..           .  ....| |.....++++++++++    |+++++|++|+|+++++..++. +.
T Consensus        17 ~~i~l~~Nenp~~~~-----------~--~~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~it~Gs~~~l~~~~~-~~   77 (332)
T PRK06425         17 RIIDFSANINDFMDI-----------G--DISIY-PEISYTDIEDQIKIYT----QGLKIKVLIGPGLTHFIYRLLS-YI   77 (332)
T ss_pred             CEEEeccccCCCcCh-----------h--hcccC-cCcCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH-Hh
Confidence            689999999888411           1  14457 4556789999999988    7889999999999999999997 45


Q ss_pred             CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       111 ~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      ++| .|++.+|+|+.+...++..|++++.+ |.++.  ..+.+.+++   .+  ++++++++||||||.+++.+++++|+
T Consensus        78 ~~~-~vv~~~P~y~~y~~~~~~~G~~v~~v-p~~~~--~~~~~~l~~---~~--~k~v~l~nP~NPTG~~~s~~~~~~l~  148 (332)
T PRK06425         78 NVG-NIIIVEPNFNEYKGYAFTHGIRISAL-PFNLI--NNNPEILNN---YN--FDLIFIVSPDNPLGNLISRDSLLTIS  148 (332)
T ss_pred             CCC-cEEEeCCChHHHHHHHHHcCCeEEEE-eCCcc--cCcHHHHhh---cC--CCEEEEeCCCCCcCCccCHHHHHHHH
Confidence            776 46677999999999999999999999 88754  335554442   23  59999999999999999999999999


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCc-c--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKH-C--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~-~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      ++|++|++++|+||+|.++.+++.+. .  ....+++++++||||.+|++|+|+||++.+   +++++.+.....  +++
T Consensus       149 ~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~---~~li~~l~~~~~--~~~  223 (332)
T PRK06425        149 EICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD---DYNMKISRKITE--PWS  223 (332)
T ss_pred             HHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC---HHHHHHHHHcCC--CCc
Confidence            99999999999999999988654211 1  113468999999999999999999999998   788888887554  344


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      .+.+.+.++. ... ...+.++.++.++++++.+.+.|++++. .+..+.+++|+|++++    +..++++.++ ++||.
T Consensus       224 ~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~g~f~~~~~~----~~~~~~~~l~-~~gi~  295 (332)
T PRK06425        224 VCDPAIDFIR-SID-LDYVAKHSLDIMENERSYLINNLEAMGF-RAAGDPSANFITFMIP----DAHDFYSYLL-KNGIL  295 (332)
T ss_pred             cCHHHHHHHH-Hhh-hHHHHHHHHHHHHHHHHHHHHHHHHCCC-EECCCCCceEEEEEcC----CHHHHHHHHH-HCCeE
Confidence            4444433322 111 1245567788899999999999998864 5554445899999986    4678888887 68999


Q ss_pred             EeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          348 VIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       348 v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      +.||..|+.  ++++||+++.  .++.+.+++.|++++
T Consensus       296 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~  331 (332)
T PRK06425        296 VRLLDDYECLGEQYIRIAIRR--RSFNIKLVNALRNFL  331 (332)
T ss_pred             EEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence            999998853  5799999985  677778887777654

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=4e-39  Score=300.64  Aligned_cols=325  Identities=27%  Similarity=0.375  Sum_probs=264.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .++++|+.+.+++++++.+++++.+.+..  ...| +..|.+++|+++++++    ++++++|++++|+++++..++..+
T Consensus        22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~----~~~~~~I~~~~G~~~~l~~~~~~~   94 (352)
T PRK03321         22 PGAIKLSSNETPFGPLPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHL----GVPPEHVAVGCGSVALCQQLVQAT   94 (352)
T ss_pred             ccceeccCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHh----CcCHHHEEECCCHHHHHHHHHHHh
Confidence            36899999999998889999999887753  4557 4578999999999998    678899999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      .++||+|+++.|+|..+...++..|++++.+ |.+++ +.++++.+++.+++++  +++++++|+||||.++|.+++.++
T Consensus        95 ~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~l~~l  170 (352)
T PRK03321         95 AGPGDEVIFAWRSFEAYPILVQVAGATPVQV-PLTPD-HTHDLDAMAAAITDRT--RLIFVCNPNNPTGTVVTPAELARF  170 (352)
T ss_pred             cCCCCEEEeCCCCHHHHHHHHHHcCCEEEEc-cCCCC-CCCCHHHHHHhhccCC--CEEEEeCCCCCcCCCcCHHHHHHH
Confidence            9999999999999988888888999999999 88744 3679999999887655  999999999999999997777777


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      ++.| ++++++|+||+|..+.+++....    ....+++++++|+||.+|++|+|+||++.+   +++++.+.+..  ..
T Consensus       171 ~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~--~~  244 (352)
T PRK03321        171 LDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH---PEVIAALRKVA--VP  244 (352)
T ss_pred             HHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC---HHHHHHHHHhc--CC
Confidence            7655 36999999999998887543211    112468899999999999999999999998   78888887653  46


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  345 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  345 (400)
                      ++.+.+++.++..++... +...+..+...++++.+.+.|++.+. .+.++ +++|+|++++.   +..++.+.| +++|
T Consensus       245 ~~~s~~~q~~a~~~l~~~-~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~-~g~~i~i~l~~---~~~~~~~~l-~~~g  317 (352)
T PRK03321        245 FSVNSLAQAAAIASLAAE-DELLERVDAVVAERDRVRAALRAAGW-TVPPS-QANFVWLPLGE---RTADFAAAA-AEAG  317 (352)
T ss_pred             CCCCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCC-CCCEEEEeCCC---CHHHHHHHH-HHCC
Confidence            778999999888888753 33445555666677888899988754 44444 48899999863   467888877 4799


Q ss_pred             eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      |.+.+   |+ .+++||+++  +.++.+.++++|.+++.
T Consensus       318 I~v~~---~~-~~~iRi~~~--~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        318 VVVRP---FA-GEGVRVTIG--APEENDAFLRAARAWRA  350 (352)
T ss_pred             EEEEc---cC-CCcEEEeeC--CHHHHHHHHHHHHHHhc
Confidence            99987   32 457999997  48888888888887654

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-39  Score=281.02  Aligned_cols=323  Identities=25%  Similarity=0.387  Sum_probs=271.0

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh-cCc
Q 015768           61 ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGV  135 (400)
Q Consensus        61 ~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~  135 (400)
                      ...|.+-.|...+|+++|+++.+..|    .+|+++++++|+|.+++.++.+|..|||..+++.|.|+++...++. .|+
T Consensus       114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv  193 (471)
T KOG0256|consen  114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV  193 (471)
T ss_pred             HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence            44677779999999999999988764    3589999999999999999999999999999999999999988775 578


Q ss_pred             EEEEeccCC-CCCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768          136 THILVGPCS-SKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM  210 (400)
Q Consensus       136 ~~~~~~~~~-~~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~  210 (400)
                      +++++ ... .+|++++.+.+|.++.    .+..+|.|+|+||+||.|..++++++..+.+++.++|+.+|+||+|..-.
T Consensus       194 eivpv-~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV  272 (471)
T KOG0256|consen  194 EIVPV-HCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV  272 (471)
T ss_pred             eEEEE-EeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence            99888 554 5678999999999886    34447999999999999999999999999999999999999999999888


Q ss_pred             cCCCCcccc---------CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhc
Q 015768          211 YDGRKHCCV---------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQ  281 (400)
Q Consensus       211 ~~~~~~~~~---------~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~  281 (400)
                      ++...+.+.         ..+++-++.|+||-+|+||+|+|.|.+.+  +++.....+...  ....+...|..++..|.
T Consensus       273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n--e~VvsaA~kmss--f~~vSs~tQ~~la~LLS  348 (471)
T KOG0256|consen  273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN--EDVVSAATKMSS--FGLVSSQTQYLLASLLS  348 (471)
T ss_pred             cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC--hHHHHHHHHHhh--ccCCcHHHHHHHHHHhc
Confidence            876654321         35678889999999999999999999998  778777776654  44568889999999988


Q ss_pred             CCc---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCc
Q 015768          282 TGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGA  353 (400)
Q Consensus       282 ~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~  353 (400)
                      +..   .++.+..++++.+..++.+.|++++. .+....+|.|+|+++...-     ...-++.+.++.+-++.+.||..
T Consensus       349 D~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI-~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s  427 (471)
T KOG0256|consen  349 DEEFTREYLRENNKRLRIRHRYIVEGLKALGI-PCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSS  427 (471)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCC-ceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCc
Confidence            722   45677778888888999999999886 7777778999999986421     12346777788666999999998


Q ss_pred             cC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          354 CG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       354 ~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      |.  .++|+|+||+.+.++.++-+++||+.++.+..+.
T Consensus       428 ~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~~~  465 (471)
T KOG0256|consen  428 CHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQVQP  465 (471)
T ss_pred             ceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhhcc
Confidence            86  5899999999877777777999999999866543

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.3e-38  Score=294.07  Aligned_cols=313  Identities=19%  Similarity=0.222  Sum_probs=247.9

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~  108 (400)
                      .++++|+.+.+++++|+..+..  ..     ...|+. .. .++++++++++    |++ +++|++|+|+++++..+.. 
T Consensus        24 ~~~i~ls~Nenp~~~~~~~~~~--~~-----~~~Yp~-~~-~~L~~~ia~~~----~~~~~~~I~i~~Gs~e~i~~l~~-   89 (339)
T PRK06959         24 DAWLDLSTGINPHGYPVPPVPA--DA-----WRRLPE-DD-DGLAACAARYY----GAPDAAHVLPVAGSQAAIRALPA-   89 (339)
T ss_pred             hhhceeccCCCCCCCCCCCCCH--HH-----HHhCCC-ch-HHHHHHHHHHh----CCCCcccEEECcCHHHHHHHHHH-
Confidence            4579999999999766322221  11     233743 33 78888888877    776 5899999999999987654 


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      +.++|+ |+++.|+|+.+...++..|++++.+ +.++       +.+    ...  .+++++++||||||.+++.+++++
T Consensus        90 ~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v-~~~~-------~~~----~~~--~~~v~l~nPnNPTG~~~s~~~l~~  154 (339)
T PRK06959         90 LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPL-DEAA-------DTL----PAA--LTHLIVVNPNNPTAERLPAARLLR  154 (339)
T ss_pred             hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEee-cccc-------hhc----ccc--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            567776 8899999999999999999999988 7653       112    122  378999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  268 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~  268 (400)
                      +++.|.+++.++|+||+|..+............+++++++||||.||++|+|+||++++   +++++.+.+...  +++.
T Consensus       155 l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~---~~li~~l~~~~~--~~~v  229 (339)
T PRK06959        155 WHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA---PALLAALRDALG--AWTV  229 (339)
T ss_pred             HHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecC---HHHHHHHHHhcC--CCCC
Confidence            99999889999999999998865322111123467899999999999999999999998   899999988764  5667


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                      +.+.|.++..+|++ .++.++.++.+.++++++.+.|++++. .+. + +++|+|++++    +..++...|. ++||.+
T Consensus       230 s~~~q~a~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-~-~~~f~~~~~~----~~~~l~~~l~-~~GI~v  300 (339)
T PRK06959        230 SGPARHAVRAAFAD-AAWQAAMRERLAADGARLAALLRAHGF-AVH-A-TPLFSWTDDP----RAAALHAALA-RRGIWT  300 (339)
T ss_pred             cHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCC-Ccc-C-cceEEEEeCC----CHHHHHHHHH-hCCeEE
Confidence            89999999999986 567788889999999999999999864 444 3 4789999876    3567888776 789999


Q ss_pred             eCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          349 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       349 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      +.   |...+++||+++. ++++.+.+++.|++++..+...
T Consensus       301 r~---~~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~~~  337 (339)
T PRK06959        301 RY---FAPPPSVRFGLPA-DEAEWQRLEDALAECVPTLAAA  337 (339)
T ss_pred             EE---CCCCCeEEEECCC-CHHHHHHHHHHHHHHHHHHhhc
Confidence            74   4456799999964 6788899999998888776543

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=1e-37  Score=287.71  Aligned_cols=305  Identities=21%  Similarity=0.300  Sum_probs=235.5

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      ++|+|+.+.+++++++..+..  ..     ...|+.  +...+|+++++++    +  +++|++|+|+++++..+..  .
T Consensus        21 ~~i~l~~ne~p~~~~~~~~~~--~~-----~~~yp~--~~~~Lr~~ia~~~----~--~~~I~it~Gs~~al~~~~~--~   83 (330)
T PRK05664         21 DWLDLSTGIAPWPWPVPAIPA--DA-----WARLPE--TDDGLEAAARAYY----G--APQLLPVAGSQAAIQALPR--L   83 (330)
T ss_pred             HheeecCCcCCCCCCCcccCH--HH-----HHhCCC--ChHHHHHHHHHHh----C--CCCEEECcCHHHHHHHHHH--c
Confidence            579999999887655322211  11     122633  2378999999998    4  4799999999999998863  5


Q ss_pred             CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       111 ~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      .+||+|++++|+|+.+...++..|++++.+ |.+         .+++.+. ++  +++++++||||||.+++.+++++|+
T Consensus        84 ~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~---------~~~~~~~-~~--~~v~l~nP~NPTG~~~s~~~l~~l~  150 (330)
T PRK05664         84 RAPGRVGVLSPCYAEHAHAWRRAGHQVREL-DEA---------EVEAALD-SL--DVLVVVNPNNPTGRRFDPARLLAWH  150 (330)
T ss_pred             cCCCEEEEcCCChHHHHHHHHHcCCeEEEe-chh---------hHhhhhc-CC--CEEEEeCCcCCCCCccCHHHHHHHH
Confidence            799999999999999999999999999988 643         3444443 33  7899999999999999999999999


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccH
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASI  270 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~  270 (400)
                      ++|+++++++|+||+|..+............+++++++||||.+|++|+|+||++.+   +++++.+.....  +++.+.
T Consensus       151 ~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~---~~l~~~~~~~~~--~~~~~~  225 (330)
T PRK05664        151 ARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE---PALLRALAELLG--PWTVSG  225 (330)
T ss_pred             HHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeC---HHHHHHHHHhcC--CCCCCH
Confidence            999999999999999987653221111223467899999999999999999999998   788888887654  456788


Q ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC
Q 015768          271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP  350 (400)
Q Consensus       271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~  350 (400)
                      +.+.++..+|.. ..+.++.++.+.++++.+.+.|++++. ...+ ...+|+|++++    +..++...|. ++||.+..
T Consensus       226 ~~~~~~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~-~~~~f~~~~~~----~~~~~~~~l~-~~gi~v~~  297 (330)
T PRK05664        226 PTRWLAQAALAD-TPWQRRQRERLLAASQRLAALLRRHGL-TPAG-GCALFQWVRTE----DAAALHEFLA-RRGILTRL  297 (330)
T ss_pred             HHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHHCCC-cccC-CcceEEEEecC----CHHHHHHHHH-HCCeEEEE
Confidence            889999999986 456677888899999999999998754 3222 22488898875    4678887765 88999974


Q ss_pred             CCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          351 GGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       351 g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                         |..++++||+++. +.++.+++.+.|++.
T Consensus       298 ---f~~~~~iRis~~~-~~~~~~~l~~al~~~  325 (330)
T PRK05664        298 ---FEQPASLRFGLPA-DEADWARLDQALLAY  325 (330)
T ss_pred             ---CCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence               4456899999995 566655555555444

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=3e-38  Score=291.41  Aligned_cols=311  Identities=24%  Similarity=0.362  Sum_probs=250.9

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      +++.++|+.|.+++++|  +.+...     .....|+... .+++|+.+++++    ++++++|++|+|+++++..+..+
T Consensus        16 ~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~y~~~~-~~~lr~~la~~~----~~~~~~i~~t~G~~~~i~~~~~~   83 (330)
T TIGR01140        16 PEDWLDFSTGINPLGPP--VPPIPA-----SAWARYPDPE-YDELRAAAAAYY----GLPAASVLPVNGAQEAIYLLPRL   83 (330)
T ss_pred             hhheeEccccCCCCCCC--hhhcch-----HHHhhCCCcc-HHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHH
Confidence            46789999999888755  222211     1145576555 489999999987    77889999999999999998766


Q ss_pred             hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      + .+| .|++++|+|..+...++..|++++.+ +        |++.+++.+. +  .+++++++|+||||.+++.+++++
T Consensus        84 l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~-~--------d~~~l~~~~~-~--~~~v~i~~p~NPtG~~~~~~~~~~  149 (330)
T TIGR01140        84 L-APG-RVLVLAPTYSEYARAWRAAGHEVVEL-P--------DLDRLPAALE-E--LDVLVLCNPNNPTGRLIPPETLLA  149 (330)
T ss_pred             h-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEe-C--------CHHHHHhhcc-c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            4 677 79999999999999999999999988 5        6788888873 3  378999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      |+++|++||+++|+|++|..+......... ...+++++++|+||.+|++|+|+||++.+   +++++.+.....  .++
T Consensus       150 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~---~~~~~~l~~~~~--~~~  224 (330)
T TIGR01140       150 LAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH---PALLARLREALG--PWT  224 (330)
T ss_pred             HHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCC---HHHHHHHHhcCC--CCC
Confidence            999999999999999999987754211111 12478899999999999999999999998   788888887654  456


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      .+.+++.++..+++. .+|..+.+++++++++.+.+.|++++.+.+.+ .+++|+|+.++.    ..+++++|+ ++||.
T Consensus       225 ~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~f~~~~~~~----~~~l~~~l~-~~gi~  297 (330)
T TIGR01140       225 VNGPARAAGRAALAD-TAWQAATRARLAAERARLAALLARLGGLEVVG-GTALFLLVRTPD----AAALHEALA-RRGIL  297 (330)
T ss_pred             chHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCeEEEEEcCC----HHHHHHHHH-HCCEE
Confidence            788899999989885 46677888999999999999999987655544 458999999873    568888886 68999


Q ss_pred             EeCCCccC--CCCeEEEEeccCCHHHHHHHHHHH
Q 015768          348 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       348 v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      +.||..|.  .++++|++++. +.++ +.++++|
T Consensus       298 v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l  329 (330)
T TIGR01140       298 IRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL  329 (330)
T ss_pred             EEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence            99999885  45799999986 4444 5555544

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=1.6e-37  Score=284.10  Aligned_cols=300  Identities=21%  Similarity=0.312  Sum_probs=225.9

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .++|+|+.+.++++ |+.+.+++.+++..  ...|+.   ...+++++++++    +   ++|++|+|+++++..++..+
T Consensus         8 ~~~i~l~~~~np~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~----~---~~I~vt~G~~~al~~~~~~~   74 (311)
T PRK08354          8 EGLIDFSASVNPYP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLF----G---EPIVITAGITEALYLIGILA   74 (311)
T ss_pred             cceeEecCCCCCCC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHH----C---CCEEECCCHHHHHHHHHHhh
Confidence            46899999988886 57888888877654  345642   467888888876    3   57999999999999888554


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                       .+||+|+++.|+|+.+...++..|++++.+ +       +|++.+++.++ ++  +++++++|+||||.+++.+++++|
T Consensus        75 -~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~-------~d~~~l~~~~~-~~--~~vi~~~P~NPTG~~~~~~~l~~l  142 (311)
T PRK08354         75 -LRDRKVIIPRHTYGEYERVARFFAARIIKG-P-------NDPEKLEELVE-RN--SVVFFCNPNNPDGKFYNFKELKPL  142 (311)
T ss_pred             -CCCCeEEEeCCCcHHHHHHHHHcCCEEeec-C-------CCHHHHHHhhc-CC--CEEEEecCCCCCCCccCHHHHHHH
Confidence             489999999999999999999999998766 3       46778887775 33  789999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  269 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  269 (400)
                      +++|+++|+++|+||+|.++.+++..   ...+++++++||||.+|++|+|+||+++.   .   +.++....  .+..+
T Consensus       143 ~~~a~~~~~~li~De~y~~f~~~~~~---~~~~~vi~~~S~SK~~~l~GlRiG~~v~~---~---~~l~~~~~--~~~~~  211 (311)
T PRK08354        143 LDAVEDRNALLILDEAFIDFVKKPES---PEGENIIKLRTFTKSYGLPGIRVGYVKGF---E---EAFRSVRM--PWSIG  211 (311)
T ss_pred             HHHhhhcCcEEEEeCcchhccccccc---cCCCcEEEEeccHhhcCCccceeeeeeeh---H---HHHHHcCC--CccCC
Confidence            99999999999999999998876422   23678999999999999999999999873   3   34444443  44556


Q ss_pred             HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe
Q 015768          270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI  349 (400)
Q Consensus       270 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~  349 (400)
                      .+.+.++..+++...+++.+.++.+.+.++.+.+.+       ...+. +.|++++++    +..++++.+. ++||.+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------~~~~~-~~~~~~~~~----~~~~~~~~l~-~~gv~v~  278 (311)
T PRK08354        212 STGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKAL-------YVKSD-ANFFIKDVG----DAEKFVEFLK-RNGILVR  278 (311)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc-------CCCCC-CcEEEEECC----CHHHHHHHHH-HCCeEEE
Confidence            666666666665322344444444454444444433       12355 555556664    4677888775 7899999


Q ss_pred             CCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          350 PGGACGCRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       350 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      ||..|+.++++||+++.  +++.+++++.|+
T Consensus       279 ~g~~f~~~~~iRi~~~~--~~~~~~l~~al~  307 (311)
T PRK08354        279 DCTSFGLPGYIRFSVRD--REENEKLIRALR  307 (311)
T ss_pred             ecccCCCCCeEEEEeCC--HHHHHHHHHHHH
Confidence            99999878999999996  344444444443

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=3.7e-36  Score=280.91  Aligned_cols=339  Identities=31%  Similarity=0.485  Sum_probs=278.5

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhc
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      ++|+.+.+++..++.+++++.+.........|.+..+..++++.+++++...++.  .++++++++|+|+++..++.++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~   80 (350)
T cd00609           1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL   80 (350)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence            5788999988888888887766222233556778899999999999999888763  36789999999999999999999


Q ss_pred             CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCH--HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       111 ~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      ++||+|+++.++|+++...++..|.+++.+ +.++++. .+.  +.++....++  +++|++++++||+|.++|.+++.+
T Consensus        81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-~~~~~~~~~~~~~~~--~~~v~i~~~~~~tG~~~~~~~l~~  156 (350)
T cd00609          81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPV-PLDEEGG-FLLDLELLEAAKTPK--TKLLYLNNPNNPTGAVLSEEELEE  156 (350)
T ss_pred             CCCCEEEEcCCCchhHHHHHHHCCCEEEEE-ecccccC-CccCHHHHHhhcCcc--ceEEEEECCCCCCCcccCHHHHHH
Confidence            999999999999999999999999999999 8876653 232  5555554444  599999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      |.++|+++|+++|+|++|+.+.+.+...    .....+.+++++|++|+++.+|.++|+++.++  +++.+.+.......
T Consensus       157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~--~~~~~~~~~~~~~~  234 (350)
T cd00609         157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP--EELLERLKKLLPYT  234 (350)
T ss_pred             HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH--HHHHHHHHHHHHhc
Confidence            9999999999999999999887655432    23345678999999999987899999999983  27888888777666


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      +.+++...+.++..+++...++.++..+.+.++++++.+.|++.+...+..+.+++++|++++..  ...+...+++.++
T Consensus       235 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~  312 (350)
T cd00609         235 TSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG--DDEEFLERLLLEA  312 (350)
T ss_pred             ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC--ChHHHHHHHHHhC
Confidence            67889999999999998754677888899999999999999998774434566689999998754  2344555566789


Q ss_pred             CeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       345 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      ||.+.++..|.  .+.++|++++.. .+|++.++++|+
T Consensus       313 gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~  349 (350)
T cd00609         313 GVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA  349 (350)
T ss_pred             CEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence            99999988776  788999999985 899999888875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-35  Score=260.70  Aligned_cols=322  Identities=21%  Similarity=0.314  Sum_probs=265.5

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHH-hhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEE
Q 015768           61 ISKYGADEGLPELRDALVKKLN-QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH  137 (400)
Q Consensus        61 ~~~y~~~~g~~~~~~~~a~~l~-~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~  137 (400)
                      ..+|+...|..++...+.++.. ..+..  +..++++|+|.|.+++.+++.++++||+|++..++|.+....++..|+.+
T Consensus        93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~  172 (472)
T KOG0634|consen   93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI  172 (472)
T ss_pred             hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence            5689999999999999998665 22322  24589999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCCCCCCCCHHHHHHhhcc-------CCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768          138 ILVGPCSSKTLHPDADWLEKTLET-------KPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF  209 (400)
Q Consensus       138 ~~~~~~~~~~~~~~~e~l~~~l~~-------~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~  209 (400)
                      +.| +.|++|  +++|.|++.+..       .+.|++++.. ..+||||..++.+..++|.++|++|++++|+||.|..+
T Consensus       173 ipv-~md~~G--i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L  249 (472)
T KOG0634|consen  173 IPV-KMDQDG--IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL  249 (472)
T ss_pred             Eec-cccCCC--CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence            999 888886  589999998862       2335777655 56999999999999999999999999999999999988


Q ss_pred             ccCC---C-----C-c--------------cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768          210 MYDG---R-----K-H--------------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  266 (400)
Q Consensus       210 ~~~~---~-----~-~--------------~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~  266 (400)
                      -++.   .     + +              ..+..++++-+.||||.++ ||+|+||+.++   +.+++++-......+.
T Consensus       250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~---~~~l~ril~~ae~~t~  325 (472)
T KOG0634|consen  250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGN---SLFLKRILDLAEVATS  325 (472)
T ss_pred             eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecC---HHHHHHHhhhcceeec
Confidence            7762   1     1 0              1122578999999999997 99999999999   7788888877777777


Q ss_pred             CccHHHHHHHHHHhcC-Cc----HHHHHHHHHHHHHHHHHHHHhcc-CCC--CcccCCCCceEEEeeCC-------CCCC
Q 015768          267 CASIISQHLALYSLQT-GP----EWVTERVKDLVRNREIIREALSP-LGE--GAVKGGEGAIYLWARLP-------EKHL  331 (400)
Q Consensus       267 ~~~~~~~~~~~~~l~~-~~----~~~~~~~~~~~~~~~~l~~~L~~-~~~--~~~~~~~~~~~~~~~~~-------~~~~  331 (400)
                      +++.+.|..+.+.|.. ++    +|+.+.+..+..+++.+..+|.+ ++.  .++..|.+|+|+|++++       ....
T Consensus       326 ~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~  405 (472)
T KOG0634|consen  326 GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSIN  405 (472)
T ss_pred             CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchH
Confidence            7888888888777775 22    67888888888889998888887 444  46778899999999997       3332


Q ss_pred             CHHHHHHHHHHhcCeEEeCCCccCC------C-CeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          332 DDFEVVRWLAHRHGVVVIPGGACGC------R-GHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       332 ~~~~~~~~l~~~~gi~v~~g~~~~~------~-~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      +.++.....+.++||.+.+|..|..      . -++|++++..+.|+++++++++..++++....
T Consensus       406 q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~~  470 (472)
T KOG0634|consen  406 QIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFIT  470 (472)
T ss_pred             HHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence            3556666667799999999999842      2 38999999888999999999999999987653

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=2.3e-33  Score=266.38  Aligned_cols=348  Identities=18%  Similarity=0.183  Sum_probs=252.2

Q ss_pred             HHHHHHHhc-CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEE
Q 015768           20 VQIQELVRG-AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKL-YKSSVM   93 (400)
Q Consensus        20 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~   93 (400)
                      .++++.|-. .++.+.|+.+... +.|+.+++++.+++......    .+.......+..+.+.+.+++.+|+ ++++|+
T Consensus         7 ~~~r~~fp~l~~~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~   85 (401)
T PRK10874          7 AQFRAQFPALQDAGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIV   85 (401)
T ss_pred             HHHHHhCCCcCCceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence            445555542 3458889888765 46788999998888643111    1111111233344444455555588 689999


Q ss_pred             EeCChHHHHHHHHHHhc----CCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768           94 VTAGANQAFVNIVLTLC----DAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (400)
Q Consensus        94 ~~~g~t~a~~~~~~~l~----~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~  165 (400)
                      +++|+|++++.++.++.    ++||+|++++++|++.    ....+..|++++.+ |.+.+ +.+|++.+++.+++++  
T Consensus        86 ~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t--  161 (401)
T PRK10874         86 WTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKL-PLGAD-RLPDVDLLPELITPRT--  161 (401)
T ss_pred             EECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEE-ecCCC-CcCCHHHHHHhcCcCc--
Confidence            99999999999999983    7899999999999763    34557789999999 87654 4679999999998766  


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      ++|++++++||||.++|   +++|.++|+++|+++++|++|+....   +......+.++++.|++|.+|.+|  +|+++
T Consensus       162 ~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~---~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~  233 (401)
T PRK10874        162 RILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF---PADVQALDIDFYAFSGHKLYGPTG--IGVLY  233 (401)
T ss_pred             EEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc---cCCchhcCCCEEEEecccccCCCc--cEEEE
Confidence            99999999999999999   88999999999999999999974332   122223356788999999887555  59988


Q ss_pred             ccCCcHHHHHHHHHhhc---------------------cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHH
Q 015768          246 YPSEVEGFATQLLKVQD---------------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       246 ~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~  303 (400)
                      .+   +++++.+.....                     ....+++.+.+.++..+++... ....+..++..++++++.+
T Consensus       234 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~  310 (401)
T PRK10874        234 GK---SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAED  310 (401)
T ss_pred             Ec---hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence            88   677766543220                     0112456666666666665311 1234556777788899999


Q ss_pred             HhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHH
Q 015768          304 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKA  374 (400)
Q Consensus       304 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~  374 (400)
                      .|++++++.+..+..+.++++.++.  .+.+++...| .++||.+.+|..|.        ..+++|+|++. +|++|++.
T Consensus       311 ~l~~~~g~~~~~~~~~~i~~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~  387 (401)
T PRK10874        311 ALAKLPGFRSFRCQDSSLLAFDFAG--VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDA  387 (401)
T ss_pred             HHhcCCCEEEeCCCCCcEEEEEECC--cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHH
Confidence            9998866565544445566667654  3567788766 57999999988663        35899999998 99999999


Q ss_pred             HHHHHHHHHHHH
Q 015768          375 AADRLRRGLEEL  386 (400)
Q Consensus       375 ~~~~l~~~l~~~  386 (400)
                      +++.|+++++.+
T Consensus       388 ll~al~~~~~~~  399 (401)
T PRK10874        388 LVNAVDRALELL  399 (401)
T ss_pred             HHHHHHHHHHHh
Confidence            999999988754

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=2.6e-33  Score=265.73  Aligned_cols=342  Identities=18%  Similarity=0.178  Sum_probs=247.8

Q ss_pred             HHHHHhc-CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC-CCCCCC-------CcHHHHHHHHHHHHhhcCCC-CCc
Q 015768           22 IQELVRG-AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS-KYGADE-------GLPELRDALVKKLNQENKLY-KSS   91 (400)
Q Consensus        22 ~~~~~~~-~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~-------g~~~~~~~~a~~l~~~~~~~-~~~   91 (400)
                      +++.|-. .++.+.|+.+... ++|+.+++++.+++...... .++...       ..+++|+.+++++    |.+ +++
T Consensus         6 ~r~~fp~l~~~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~   80 (398)
T TIGR03392         6 FRQQFPALQDGTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAPDAEN   80 (398)
T ss_pred             HHHhCCccCCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCCe
Confidence            4444542 3368889888765 46789999998887532111 111111       1233455555554    774 789


Q ss_pred             EEEeCChHHHHHHHHHHh----cCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768           92 VMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (400)
Q Consensus        92 i~~~~g~t~a~~~~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~  163 (400)
                      |++|+|+|++++.++.++    .++||+|++++|+|++.    ...++..|++++.+ |.+.+ +.+|++.+++.+.+++
T Consensus        81 i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~~~~~l~~~i~~~t  158 (398)
T TIGR03392        81 IVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKL-PIGAD-LLPDIRQLPELLTPRT  158 (398)
T ss_pred             EEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHHhccCc
Confidence            999999999999999998    47899999999999773    34567889999999 88755 4679999999998766


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEE
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY  243 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~  243 (400)
                        ++|++++++||||.+.|   +++|.++|+++|+++++|++|+.+..   +......+.+++++|++|.+|++|  +||
T Consensus       159 --~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~---~~~~~~~~~d~~~~s~~K~~gp~G--~G~  228 (398)
T TIGR03392       159 --RILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG---PPDVQALDIDFYAFSGHKLYGPTG--IGV  228 (398)
T ss_pred             --eEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC---CCChhhcCCCEEEEecccccCCCc--eEE
Confidence              99999999999999999   88899999999999999999974432   122223456788899999887555  899


Q ss_pred             EEccCCcHHHHHHHHHhhcc---------------------CCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHH
Q 015768          244 IAYPSEVEGFATQLLKVQDN---------------------IPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREII  301 (400)
Q Consensus       244 i~~~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l  301 (400)
                      ++.+   +++++.+......                     ...+++.+...++..+++... ....+..++..++++++
T Consensus       229 l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l  305 (398)
T TIGR03392       229 LYGK---TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLA  305 (398)
T ss_pred             EEEc---HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            9888   6776665432110                     112455555566666555311 12346667788889999


Q ss_pred             HHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHH
Q 015768          302 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDC  372 (400)
Q Consensus       302 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~  372 (400)
                      .+.|++++++.+..+....++++.++.  .+.+++...| .++||.+.+|..|.        .++++|+|++. +|++|+
T Consensus       306 ~~~l~~l~g~~~~~~~~~~i~~~~~~~--~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei  382 (398)
T TIGR03392       306 EERLAQLPGFRSFRCPGSSLLAFDFAG--VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV  382 (398)
T ss_pred             HHHHhcCCCeEEeCCCCCcEEEEEeCC--cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence            999988866555543335566666653  3567888876 47899999998663        35799999998 999999


Q ss_pred             HHHHHHHHHHHHHH
Q 015768          373 KAAADRLRRGLEEL  386 (400)
Q Consensus       373 ~~~~~~l~~~l~~~  386 (400)
                      +.+++.|+++++.+
T Consensus       383 ~~l~~~l~~~~~~~  396 (398)
T TIGR03392       383 DALVDAVGAALELL  396 (398)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988753

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=5.7e-33  Score=264.07  Aligned_cols=354  Identities=14%  Similarity=0.082  Sum_probs=264.2

Q ss_pred             chHHHHHHHHHhcCCCeEEcCCCCC--CCCCcH---HHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC
Q 015768           16 MPIMVQIQELVRGAKNAVSLAQGVV--YWQPPK---MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS   90 (400)
Q Consensus        16 ~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~---~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~   90 (400)
                      .....+...+.+.|.+.++|+.|++  ++.+|.   .+.+++.+++..+ ...|++..|.++++++++++++      .+
T Consensus        22 ~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-~~~Y~~~~g~~~Lreaia~~~~------~~   94 (460)
T PRK13238         22 TTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-DEAYAGSRSYYRLEDAVKDIFG------YP   94 (460)
T ss_pred             cCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHhC------CC
Confidence            3444555556678899999999998  676655   6788888887654 4579999999999999999983      46


Q ss_pred             cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-------CCC--CCCHHHHHHhhcc
Q 015768           91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-------KTL--HPDADWLEKTLET  161 (400)
Q Consensus        91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-------~~~--~~~~e~l~~~l~~  161 (400)
                      ++++|+|+++|+..++.++++||| |++++|.|..+...++..|++++.+ +.++       +++  ++|++.|++.+++
T Consensus        95 ~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v-~~~~~~~~~~~~~f~g~id~e~Le~~i~~  172 (460)
T PRK13238         95 YTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDL-VIDEALDTGSRHPFKGNFDLEKLEALIEE  172 (460)
T ss_pred             cEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEE-eccccccccccccccCCcCHHHHHHHHhh
Confidence            799999999999999999999999 9999999999998899999999999 8753       234  4999999999984


Q ss_pred             C--CCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccc--cccCC-----CCcccc-------CCCcE
Q 015768          162 K--PTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEY--FMYDG-----RKHCCV-------EGDHV  224 (400)
Q Consensus       162 ~--~~~~~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~--~~~~~-----~~~~~~-------~~~~~  224 (400)
                      .  ..+++|++++|+||+| .+++.+++++|.++|++||+++|+|+++..  ..+..     ......       ..-.+
T Consensus       173 ~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D  252 (460)
T PRK13238        173 VGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYAD  252 (460)
T ss_pred             cCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCc
Confidence            2  1358999999999997 999999999999999999999999997742  22211     111110       01234


Q ss_pred             EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----ccCCcCc-cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----DNIPICA-SIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      ++..|..|... .+ ..|++++++  ++++++++...    ...+++. +...+.|++.+|++..+  +.+.+...++++
T Consensus       253 ~~~~Sg~K~g~-~~-~GG~i~~~d--~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~--~~~~~~~~~~~~  326 (460)
T PRK13238        253 GLTMSAKKDAM-VN-IGGLLCFRD--EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD--EDYLAYRIGQVE  326 (460)
T ss_pred             EEEEecccCCC-Cc-ceeEEEcCh--HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC--hHHHHHHHHHHH
Confidence            55556666542 11 236777775  68888887663    2224444 44557777777764111  122223344578


Q ss_pred             HHHHHhccCCCCcccCCCCceEEEeeCCCC-------CCCHHHHHHHHHHhcCeEEeCCCccCC-------------CCe
Q 015768          300 IIREALSPLGEGAVKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGC-------------RGH  359 (400)
Q Consensus       300 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------~~~  359 (400)
                      +|.+.|++.|. .+..|.+++++++++...       ...+.+++.+|+++.||.+.|++.|..             ...
T Consensus       327 ~l~~~L~~~G~-~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~  405 (460)
T PRK13238        327 YLGEGLEEAGV-PIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAEL  405 (460)
T ss_pred             HHHHHHHHCCC-CeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccce
Confidence            89999988765 777889899999987542       113578999999999999999887731             368


Q ss_pred             EEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768          360 LRISFGG--LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       360 iRi~~~~--~~~~~~~~~~~~l~~~l~~  385 (400)
                      +|++++.  -+.+.++.+.++|++..+.
T Consensus       406 ~Rla~~rr~~~~~~~~~~~~~l~~~~~~  433 (460)
T PRK13238        406 LRLAIPRRVYTQSHMDYVAEALKAVKEN  433 (460)
T ss_pred             EEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            9999986  5888888888888887643

>PLN02822 serine palmitoyltransferase

Probab=100.00  E-value=3.2e-33  Score=268.16  Aligned_cols=338  Identities=15%  Similarity=0.163  Sum_probs=255.6

Q ss_pred             cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      +|+++++|++++ +++..++++.+++.+++++...      +.|++.....++++++++++    + .++.+++++|++ 
T Consensus       107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~-~~~~i~~s~G~~-  180 (481)
T PLN02822        107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----G-TPDSILYSYGLS-  180 (481)
T ss_pred             CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----C-CCCEEEECCHHH-
Confidence            578899999885 6777899999999999987322      13445555677777777776    4 346788887766 


Q ss_pred             HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc---c----CCC-CeEEEEeC
Q 015768          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---T----KPT-PKLVSVVN  172 (400)
Q Consensus       101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~---~----~~~-~~~v~l~~  172 (400)
                      ++..++.+++++||.|++....|.++...++..|.+++.+ +.+      |.++++..++   .    .+. .++|+++.
T Consensus       181 a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~-~~n------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~  253 (481)
T PLN02822        181 TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYF-KHN------DMESLRNTLEKLTAENKRKKKLRRYIVVEA  253 (481)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEE-CCC------CHHHHHHHHHHHhhhhcccCCCcEEEEEec
Confidence            6899999999999999999888888888888889999888 654      3344444432   1    112 26888888


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----cccc-CCCcEEEEeccccccCCCcceeEEEEc
Q 015768          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      +++++|.+.|   +++|.++|++||+++|+||+|+.+.++...     +... ....+++++|+||++|+.|   ||+++
T Consensus       254 i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g  327 (481)
T PLN02822        254 IYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTG  327 (481)
T ss_pred             CCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEc
Confidence            8999999999   899999999999999999999976665321     1111 1356799999999998777   99999


Q ss_pred             cCCcHHHHHHHHHhhccCCcCcc--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEe
Q 015768          247 PSEVEGFATQLLKVQDNIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  324 (400)
Q Consensus       247 ~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  324 (400)
                      +   +++++.+.......+++.+  +..+.++..+|+..++ ..++.++++++++++++.|++..++.+..+.+++++++
T Consensus       328 ~---~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l  403 (481)
T PLN02822        328 S---ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFL  403 (481)
T ss_pred             C---HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEE
Confidence            8   7888887765555556544  6677777778864222 25778899999999999999875556666666888888


Q ss_pred             eCCCCC----CC---HHHHHHHHHHhcCeEEeCCCc--cC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          325 RLPEKH----LD---DFEVVRWLAHRHGVVVIPGGA--CG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       325 ~~~~~~----~~---~~~~~~~l~~~~gi~v~~g~~--~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .++...    .+   ..+++.+|++++||.+.++.+  +.   .+.++|++++. ++++++++++++|++++.++..
T Consensus       404 ~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~  480 (481)
T PLN02822        404 HLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK  480 (481)
T ss_pred             EeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            886421    01   357888888788999997643  32   24689999886 7999999999999999988754

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=3.3e-32  Score=258.07  Aligned_cols=332  Identities=17%  Similarity=0.134  Sum_probs=242.6

Q ss_pred             hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCCCCC---Cc----HHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGADE---GL----PELRDALVKKLNQENKLYKSSVMVTAGA   98 (400)
Q Consensus        27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~----~~~~~~~a~~l~~~~~~~~~~i~~~~g~   98 (400)
                      ++|+++|+|++++ ++++++|++++++.+++.+.. ..|+.+.   |.    .++++++++++    |.  +++++++|+
T Consensus        35 ~~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~----g~--~~~ii~~~~  107 (393)
T TIGR01822        35 ADGREVLNFCANNYLGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFL----GT--EDTILYASC  107 (393)
T ss_pred             cCCceEEEeeCCCccccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHh----CC--CcEEEECch
Confidence            4778999999998 578889999999999887632 2444444   65    55666666665    53  567777899


Q ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCC
Q 015768           99 NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPG  174 (400)
Q Consensus        99 t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~  174 (400)
                      ++|+..++.++.++||.|+++.|+|+++...++..+.+.+.+ +      ..|++++++.+++    ++.+++|++.+++
T Consensus       108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~-~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~  180 (393)
T TIGR01822       108 FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-A------NNDMADLEAQLKEARAAGARHRLIATDGVF  180 (393)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhhhcCCCceEEEEeCCc
Confidence            999999999999999999999999999998888888776555 3      2588899988873    1234788888899


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--C---ccccCCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  249 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~  249 (400)
                      ||+|.+.+   +++|.++|++||+++|+|++|+....+..  .   ......+.+++++|+||+++  |+|+||++++  
T Consensus       181 ~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g~r~G~~~~~--  253 (393)
T TIGR01822       181 SMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--GASGGFTTAR--  253 (393)
T ss_pred             cCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--CCCcEEEEeC--
Confidence            99999999   89999999999999999999964333211  1   11112356799999999985  6789999988  


Q ss_pred             cHHHHHHHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC
Q 015768          250 VEGFATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP  327 (400)
Q Consensus       250 ~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  327 (400)
                       +++++.+.......  ..+.++..+.++..+++.. +..+++.++++++++++.+.|++.+. .+..+. +.++.+.++
T Consensus       254 -~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~  329 (393)
T TIGR01822       254 -KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML-EASNELRDRLWANTRYFRERMEAAGF-DIKPAD-HPIIPVMLY  329 (393)
T ss_pred             -HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeC
Confidence             78888776643222  2233455555556666531 22456778889999999999987654 444444 344555544


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .. .+..+++.+|+ ++||.+. +..|.    ....+|++++. ++++|+++++++|.++++++
T Consensus       330 ~~-~~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~  390 (393)
T TIGR01822       330 DA-VLAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL  390 (393)
T ss_pred             CH-HHHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            32 14577888886 6799997 43332    23469999887 79999999999999987653

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=100.00  E-value=2.2e-32  Score=259.81  Aligned_cols=338  Identities=18%  Similarity=0.115  Sum_probs=247.5

Q ss_pred             hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      ++|+++++|+.++ +++++++.+++++.+.+.+...  ..+....|..++++++++++++.+|.+ +++++++| ++++.
T Consensus        39 ~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~  116 (397)
T PRK06939         39 ADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANG  116 (397)
T ss_pred             cCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHH
Confidence            5788999999987 6888899999999998865321  222234678889999999999888864 67777776 78999


Q ss_pred             HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCcc
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGT  179 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~  179 (400)
                      .++.++.+|||.|++++|+|+++...++..|.+++.+ +.      .|++++++.++.    .+.+++|++.+.+|++|.
T Consensus       117 ~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~  189 (397)
T PRK06939        117 GLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGD  189 (397)
T ss_pred             HHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCC
Confidence            9999999999999999999999998899899988777 53      377888887753    223477776677899999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCC---ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      ..+   +++|.++|++||+++|+||+|..+..+  +..   ......+.+++++|+||+++  |+|+||++.+   ++++
T Consensus       190 ~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~---~~~~  261 (397)
T PRK06939        190 IAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR---KEVI  261 (397)
T ss_pred             cCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC---HHHH
Confidence            877   999999999999999999999633222  111   11122346799999999994  5589999988   7888


Q ss_pred             HHHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768          255 TQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD  332 (400)
Q Consensus       255 ~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (400)
                      +.+.......  ..+.++..+.++..+++.. +...++++++.++++.+.+.|++++. .+..+.++++ ++.++.. .+
T Consensus       262 ~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~-~~~~~~~-~~  337 (397)
T PRK06939        262 DWLRQRSRPYLFSNSLAPAIVAASIKVLELL-EESDELRDRLWENARYFREGMTAAGF-TLGPGEHPII-PVMLGDA-KL  337 (397)
T ss_pred             HHHHHhCccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEE-EEEECCH-HH
Confidence            8877543221  2222344445555555431 11246778888999999999988764 4444554443 3444432 24


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..+++.+|+ ++||.+.++.+..   ..+++|++++. ++++++++++++|.++++++
T Consensus       338 ~~~~~~~L~-~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        338 AQEFADRLL-EEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             HHHHHHHHH-HCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            577888887 5699998654321   24689999976 79999999999999988764

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=2.4e-31  Score=245.02  Aligned_cols=307  Identities=16%  Similarity=0.127  Sum_probs=232.8

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (400)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~  119 (400)
                      ..+..+|.+.++..+.+.+.     +   |..++.+++.+.+++.+|.+++++++++|+++++..++.++.+|||+|+++
T Consensus        30 lgl~~~~~~~~~~~~~~~~~-----~---g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~  101 (346)
T TIGR03576        30 TGLAGGFKIDEEDLELLETY-----V---GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHY  101 (346)
T ss_pred             ccCCCChhHHHHHHHHHHHh-----c---CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEEC
Confidence            44567899999988887663     1   345677777777777779989999999999999999999999999999975


Q ss_pred             ---CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768          120 ---APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (400)
Q Consensus       120 ---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~  196 (400)
                         .|+|..+...++..|++++.+         .+++.++. . ++  .++|+++ +++++|.+++.+++++|+++|+++
T Consensus       102 ~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~~--~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~  167 (346)
T TIGR03576       102 LPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-DG--TSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK  167 (346)
T ss_pred             CCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-cC--ceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc
Confidence               478888888899999876432         14455432 1 33  3788776 468999999999999999999999


Q ss_pred             CCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHH
Q 015768          197 GSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH  274 (400)
Q Consensus       197 ~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (400)
                      |+++++||+|+.+..+  +... ....+.+++++|+||+  ++|+|+||++++   +++++.+........++.+++.+.
T Consensus       168 ~~~livDEAy~~~~~~~~~~~~-~~~~~~divv~s~SKa--laG~r~G~v~~~---~~li~~l~~~~~~~~~s~~~~~~~  241 (346)
T TIGR03576       168 EAIVLVDDASGARVRRLYGQPP-ALDLGADLVVTSTDKL--MDGPRGGLLAGR---KELVDKIKSVGEQFGLEAQAPLLA  241 (346)
T ss_pred             CCEEEEECCccccccccCCCCC-HHHcCCcEEEeccchh--ccccceEEEEeC---HHHHHHHHHhhcCcccCccHHHHH
Confidence            9999999999976532  1111 1112345788899995  478999999999   889999998877666777888999


Q ss_pred             HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc
Q 015768          275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC  354 (400)
Q Consensus       275 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~  354 (400)
                      ++..+|+...  .+.+++.++++++.+.+.++++   .+..+. ++|+|++++..  +..+++.++++++||.++|+..|
T Consensus       242 aa~~aL~~~~--~~~~~~~l~~r~~~~~~~l~~~---~~~~~~-~~f~~~~~~~~--~~~~~~~~ll~~~gV~v~~~~~f  313 (346)
T TIGR03576       242 AVVRALEEFE--LSRIRDAFKRKEEVYLRLFDKL---NVERTP-TGFVIKGVEEE--KLIEIGLDLLRNYGIITITAVGM  313 (346)
T ss_pred             HHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHhC---CCCcCC-CeEEEEeCCCC--CHHHHHHHHHHhCCEEEeCCccc
Confidence            9999997522  2455677777777777777743   333333 55899998742  34567778888999999999877


Q ss_pred             C-CCCeEEEEeccCCHH---HHHHHHHHHHHHH
Q 015768          355 G-CRGHLRISFGGLVED---DCKAAADRLRRGL  383 (400)
Q Consensus       355 ~-~~~~iRi~~~~~~~~---~~~~~~~~l~~~l  383 (400)
                      . .++|+||+++. +++   +.+.+++.|++.+
T Consensus       314 ~~~~~~vRis~~~-~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       314 PGASKTLRFDLAA-KDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             CCCCCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence            4 47899999996 443   5777777776543

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=9.7e-32  Score=252.11  Aligned_cols=331  Identities=16%  Similarity=0.176  Sum_probs=237.2

Q ss_pred             hcCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+++++|+.+++ +++.++++++++.+++.+...  ..|....|.....+.+++.+++.++. ++.+++++| ++++.
T Consensus        13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G-~~~~~   90 (360)
T TIGR00858        13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSG-YLANV   90 (360)
T ss_pred             ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECch-HHHHH
Confidence            46889999999853 234679999999988865221  12222233334344444444444453 466777666 56666


Q ss_pred             HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~  181 (400)
                      .++.++.++||+|+++.|+|+.+...++..|.+++.+ +.      +|++.+++.++..  ...+++++.+++|++|...
T Consensus        91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~  163 (360)
T TIGR00858        91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRY-RH------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA  163 (360)
T ss_pred             HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-cC------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc
Confidence            6788888999999999999999999999999998877 53      4788899888743  1247888888999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cc---ccc-CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH---CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~---~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      +   +++|.++|+++|+++|+||+|+.+.++..  ..   ... ..+++++++|+||++|++|   ||++.+   +++.+
T Consensus       164 ~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~---~~~~~  234 (360)
T TIGR00858       164 P---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS---QALID  234 (360)
T ss_pred             C---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC---HHHHH
Confidence            9   89999999999999999999986654322  11   111 2367899999999998655   999988   77877


Q ss_pred             HHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          256 QLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       256 ~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      .+.......  +.+.++..+.++..+++.. ...+++.+++.++++++.+.|++++. .+..+ .++++|+.++.. .+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~~~~~~~~~~~~-~~~  310 (360)
T TIGR00858       235 YLINRARTLIFSTALPPAVAAAALAALELI-QEEPWRREKLLALIARLRAGLEALGF-TLMPS-CTPIVPVIIGDN-ASA  310 (360)
T ss_pred             HHHHhCccceecCCCCHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHcCC-ccCCC-CCCEEEEEeCCH-HHH
Confidence            775443222  2334555555666666531 22356778899999999999998764 55544 477888888642 246


Q ss_pred             HHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                      .++..+|. ++||.+.++..+.   .++++|++++. +++++++.++++|+
T Consensus       311 ~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       311 LALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             HHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence            67888876 7899998865543   34689999997 79999999998763

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=100.00  E-value=2.5e-31  Score=251.46  Aligned_cols=336  Identities=18%  Similarity=0.152  Sum_probs=249.1

Q ss_pred             hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+++++|+.++ +++++++.+++++.+.+.+..  ...|....|..++++++++++++.+|. ++.+++++| ++++.
T Consensus        30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG-~~a~~  107 (385)
T TIGR01825        30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSG-FNTNQ  107 (385)
T ss_pred             ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcH-HHHHH
Confidence            5578999999886 677789999999988886532  345767788999999999999998885 355666666 67788


Q ss_pred             HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~  181 (400)
                      .++.++.++||.|+++.|+|+++...+...|+++..+ +      .+|++++++.+...  ...++|++.+++||+|.+.
T Consensus       108 ~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~  180 (385)
T TIGR01825       108 GVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIY-K------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA  180 (385)
T ss_pred             HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc
Confidence            8999999999999999999999888888888887666 3      35788888877632  1247888778899999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      +   +++|.++|++||+++|+||+|+.+.++...     ......+.+++++|+||++|++|   ||++.+   +++++.
T Consensus       181 ~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~---~~~~~~  251 (385)
T TIGR01825       181 P---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGH---KELIEY  251 (385)
T ss_pred             C---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecC---HHHHHH
Confidence            9   899999999999999999999876543211     11223567899999999997655   999888   788888


Q ss_pred             HHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768          257 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       257 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      +.......  +...+++.+.++.++++...++ .+..+++.++++++.+.|++++. .+..+. +.++.+.++.. .+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~-~~~~  327 (385)
T TIGR01825       252 LKNRARPFLFSTAQPPAVVAALAAAVDELQRS-PELMERLWDNTRFFKAGLGKLGY-DTGGSE-TPITPVVIGDE-KAAQ  327 (385)
T ss_pred             HHHhCccccccCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEECCH-HHHH
Confidence            76543211  2234566677777777642221 24566677888999999988754 555555 34555454421 1356


Q ss_pred             HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      +++..|+ ++||.+.++....   +..++|++++. ++++++++++++|++++++
T Consensus       328 ~~~~~L~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~  381 (385)
T TIGR01825       328 EFSRRLF-DEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE  381 (385)
T ss_pred             HHHHHHH-HCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence            7888887 5699985433222   23689999875 8999999999999998865

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=100.00  E-value=1.5e-31  Score=254.37  Aligned_cols=335  Identities=20%  Similarity=0.193  Sum_probs=242.1

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCC----CCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGAD----EGLPELRDALVKKLNQENKLY-KSSVMVTAGAN   99 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~----~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t   99 (400)
                      +++.+.|+.+... ++|+.+++++.+.+......    .+...    ...+++|+.+++++    |.+ +++|++++|+|
T Consensus        16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~~~~~v~~~~g~t   90 (403)
T TIGR01979        16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAASDEEIVFTRGTT   90 (403)
T ss_pred             CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHH
Confidence            4578999998766 46788999988877542111    11001    12234445555544    777 68999999999


Q ss_pred             HHHHHHHHHh----cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe
Q 015768          100 QAFVNIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (400)
Q Consensus       100 ~a~~~~~~~l----~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~  171 (400)
                      ++++.++.++    .++||+|+++++.|++..    ...+..|++++.+ +.++++ .++++.+++.+.+++  ++++++
T Consensus        91 ~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v-~~~~~~-~~~~~~l~~~i~~~~--~lv~~~  166 (403)
T TIGR01979        91 ESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI-PLDDDG-TLDLDDLEKLLTEKT--KLVAIT  166 (403)
T ss_pred             HHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE-ecCCCC-CCCHHHHHHHhccCC--eEEEEE
Confidence            9999999875    578999999999987744    4455789999999 877554 679999999998765  999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  251 (400)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~  251 (400)
                      +++||||.+.|   +++|.++|++||+++++|++|+.+..   +......+.+++++|++|.+|++|  +|+++.+   +
T Consensus       167 ~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~---~~~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~---~  235 (403)
T TIGR01979       167 HVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHM---PVDVQALDCDFYVFSGHKMYGPTG--IGVLYGK---E  235 (403)
T ss_pred             cccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcc---ccCccccCCCEEEEecccccCCCC--ceEEEEc---h
Confidence            99999999999   88999999999999999999974322   222223457799999999887555  7998887   5


Q ss_pred             HHHHHHHHhhc---------------------cCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCC
Q 015768          252 GFATQLLKVQD---------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       252 ~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      ++++.+.....                     ....+++.....++..+++...+ ..++..++..++++.+.+.|++++
T Consensus       236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~  315 (403)
T TIGR01979       236 ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIP  315 (403)
T ss_pred             HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            66665432110                     01124555666666666653111 245677888888999999998886


Q ss_pred             CCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------CCCCeEEEEecc-CCHHHHHHHH
Q 015768          310 EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAA  376 (400)
Q Consensus       310 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~  376 (400)
                      ++++..+.    .+.++.+.++.  .+..++...| +++||.+.+|..|        +.++++|||++. ++++|++.++
T Consensus       316 g~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~  392 (403)
T TIGR01979       316 GLRIYGPRDAEDRGGIISFNVEG--VHPHDVGTIL-DEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALV  392 (403)
T ss_pred             CEEEeCCCCccccCceEEEEeCC--cCHHHHHHHH-hhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHH
Confidence            66666543    14455566653  2466777655 5899999987643        346799999997 8999999999


Q ss_pred             HHHHHHHHHH
Q 015768          377 DRLRRGLEEL  386 (400)
Q Consensus       377 ~~l~~~l~~~  386 (400)
                      +.|+++++.+
T Consensus       393 ~~l~~~~~~~  402 (403)
T TIGR01979       393 EALKKVRKFF  402 (403)
T ss_pred             HHHHHHHHHh
Confidence            9999877654

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=100.00  E-value=2.2e-31  Score=253.04  Aligned_cols=336  Identities=14%  Similarity=0.111  Sum_probs=242.5

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVN  104 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~~~  104 (400)
                      .+++.|+.+... +.|+.|++++.+++......    .+.......+..+.+.+.+++.+|. ++++|++|+|+|++++.
T Consensus        22 ~~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~  100 (406)
T PRK09295         22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINL  100 (406)
T ss_pred             CceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence            367888887644 36788999998888642111    1111111223333444445555576 57899999999999999


Q ss_pred             HHHHh----cCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768          105 IVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (400)
Q Consensus       105 ~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np  176 (400)
                      ++.++    .++||+|++++++|++.    ....+..|++++.+ +.++++ .+|++++++.+++++  ++|++++++||
T Consensus       101 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~~-~~d~~~l~~~i~~~t--~lv~l~~~~n~  176 (406)
T PRK09295        101 VANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVI-PLNPDG-TLQLETLPALFDERT--RLLAITHVSNV  176 (406)
T ss_pred             HHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCCC-CCCHHHHHHhcCCCc--EEEEEecchhc
Confidence            99874    57899999999998764    34456789999999 877554 679999999998765  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      ||.++|   +++|.++|+++|+++++|++|+.+.   .+......+.++++.|++|.+|++|  +||++.+   +++.+.
T Consensus       177 tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~---~~~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~---~~~~~~  245 (406)
T PRK09295        177 LGTENP---LAEMIALAHQHGAKVLVDGAQAVMH---HPVDVQALDCDFYVFSGHKLYGPTG--IGILYVK---EALLQE  245 (406)
T ss_pred             ccccCC---HHHHHHHHHHcCCEEEEEcccccCc---cccCchhcCCCEEEeehhhccCCCC--cEEEEEc---hHhHhh
Confidence            999999   8889999999999999999997543   2222233466799999999887555  7999888   566554


Q ss_pred             HHHhh----------------------ccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768          257 LLKVQ----------------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAV  313 (400)
Q Consensus       257 l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~  313 (400)
                      +....                      .....+++.....++..+++...+ ..+...++.+++.+++++.|++++++++
T Consensus       246 ~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~  325 (406)
T PRK09295        246 MPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTL  325 (406)
T ss_pred             CCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            43110                      011235677777777777764222 2456677888889999999988876566


Q ss_pred             cCCC-CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          314 KGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       314 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      ..+. ....+.+.++.  .+.+++...| +++||.++.|..|.        .++.+|+|++. +|++|++.+++.|++..
T Consensus       326 ~~~~~~~~iv~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~  402 (406)
T PRK09295        326 YGPQNRLGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIH  402 (406)
T ss_pred             eCCCCCceEEEEEECC--cCHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence            5542 13344555654  2567777766 68999999988663        24689999998 99999999999998864


Q ss_pred             H
Q 015768          384 E  384 (400)
Q Consensus       384 ~  384 (400)
                      +
T Consensus       403 ~  403 (406)
T PRK09295        403 R  403 (406)
T ss_pred             H
Confidence            3

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=100.00  E-value=2.1e-31  Score=254.37  Aligned_cols=336  Identities=16%  Similarity=0.132  Sum_probs=243.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCCC----CcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADE----GLPELRDALVKKLNQENKLY-KSSVMVTAGANQ  100 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~----g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~  100 (400)
                      ++.+.|+.+... ++|+.|++++.+.+.+....    .+....    ..+++|+.+++++    |.+ +++|++|+|+|+
T Consensus        31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t~  105 (424)
T PLN02855         31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NASTSREIVFTRNATE  105 (424)
T ss_pred             CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCHHH
Confidence            468999997765 56788999998877542111    110111    1234455555544    775 589999999999


Q ss_pred             HHHHHHHHh----cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768          101 AFVNIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN  172 (400)
Q Consensus       101 a~~~~~~~l----~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~  172 (400)
                      +++.++.++    .++||+|+++.++|++..    ...+..|++++.+ +.+.++ .++++.+++.+++++  ++|++++
T Consensus       106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v-~~~~~~-~~~~~~l~~~i~~~t--~lv~i~~  181 (424)
T PLN02855        106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFV-GLTPDE-VLDVEQLKELLSEKT--KLVATHH  181 (424)
T ss_pred             HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEE-ecCCCC-CcCHHHHHHHhccCc--eEEEEeC
Confidence            999999874    578999999999987643    3456779999999 876554 479999999998755  9999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  252 (400)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~  252 (400)
                      ++||||.++|   +++|.++|+++|+++++|++|+..   ..+......+.+++++|++|.+|.+|  +|+++.+   ++
T Consensus       182 ~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g---~~~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~  250 (424)
T PLN02855        182 VSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVP---HMPVDVQTLGADFLVASSHKMCGPTG--IGFLWGK---SD  250 (424)
T ss_pred             ccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcC---CcCCCchhcCCCEEEeecccccCCCc--cEEEEEc---hh
Confidence            9999999999   888999999999999999999632   22222233456788999999776444  7999988   56


Q ss_pred             HHHHHHHhh---------------------ccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768          253 FATQLLKVQ---------------------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       253 ~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      +++++....                     .....+++.....++..+++... ...++..++..++++++++.|+++++
T Consensus       251 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g  330 (424)
T PLN02855        251 LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG  330 (424)
T ss_pred             hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            665553221                     01122455566666666665311 23567778888889999999988866


Q ss_pred             CcccCCC------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHH
Q 015768          311 GAVKGGE------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA  375 (400)
Q Consensus       311 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~  375 (400)
                      +++..+.      .+.++.+.++.  .+.+++...|.+++||.+..|..|.        .++++|+|++. +|++|++.+
T Consensus       331 ~~i~~~~~~~~~~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l  408 (424)
T PLN02855        331 VRIYGPKPSEGVGRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAF  408 (424)
T ss_pred             EEEeCCCcccccCcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHH
Confidence            5665432      13566677764  2567888887644599999887652        35789999998 999999999


Q ss_pred             HHHHHHHHHHHh
Q 015768          376 ADRLRRGLEELV  387 (400)
Q Consensus       376 ~~~l~~~l~~~~  387 (400)
                      ++.|++++..+.
T Consensus       409 ~~~l~~~~~~~~  420 (424)
T PLN02855        409 IHALKDTIAFFS  420 (424)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998754

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=100.00  E-value=6e-31  Score=248.97  Aligned_cols=333  Identities=16%  Similarity=0.126  Sum_probs=240.6

Q ss_pred             cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+++|+|+.+.+ ++.++|++++++.+++.+..  ...|....+...+.+.+++.+.+.++. + +.++++++++++..
T Consensus        37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~-~~i~~~~g~~~~~~  114 (385)
T PRK05958         37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-E-RALLFSSGYAANLA  114 (385)
T ss_pred             CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-C-cEEEECcHHHHHHH
Confidence            7899999999864 45578999999999886521  112323334555666666666666663 3 44555566677777


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCH
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPE  183 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~  183 (400)
                      ++..+.++||.|+++.|+|+.+...++..|++++.+ +.      .|++.+++.++.. ...+++++.+++|++|...+ 
T Consensus       115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~-  186 (385)
T PRK05958        115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRY-PH------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAP-  186 (385)
T ss_pred             HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC-
Confidence            888889999999999999999998888889988887 54      2788999988743 12356666678999999988 


Q ss_pred             HHHHHHHHHHHHcCCEEEEcccccccccC--CCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          184 RLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                        +++|.++|++||+++|+||+|+.+.++  +....    ....+.++++.|+||++|.+|   ||++.+   +++.+.+
T Consensus       187 --l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~---~~~~~~~  258 (385)
T PRK05958        187 --LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS---ETLIDYL  258 (385)
T ss_pred             --HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC---HHHHHHH
Confidence              899999999999999999999765443  21111    112456788999999998655   898888   7777776


Q ss_pred             HHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768          258 LKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       258 ~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (400)
                      ......  .+.+.++....++..+++...+. .+..+++.++++++.+.|++++. .+..+. +.++++.++.. .+..+
T Consensus       259 ~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~~~~~~~-~~~~~  334 (385)
T PRK05958        259 INRARPFIFTTALPPAQAAAARAALRILRRE-PERRERLAALIARLRAGLRALGF-QLMDSQ-SAIQPLIVGDN-ERALA  334 (385)
T ss_pred             HHhCccceecCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH-HHHHH
Confidence            543221  22345556666666677642222 46678888899999999988764 555555 66778887642 24567


Q ss_pred             HHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +..+|. ++||.+.++..+.   +++++|++++. ++++++++++++|++++
T Consensus       335 ~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        335 LAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             HHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            888885 7899998754332   34689999986 79999999999998753

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=100.00  E-value=4.5e-31  Score=246.99  Aligned_cols=320  Identities=19%  Similarity=0.159  Sum_probs=234.5

Q ss_pred             CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768           42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFA  120 (400)
Q Consensus        42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~  120 (400)
                      .+.|+.+++++.+.+..     + ......++.+++.+.+++.+|+++ +.+++++|+|+++..++.++.++||+|++..
T Consensus         8 ~~~~~~v~~a~~~~~~~-----~-~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~   81 (356)
T cd06451           8 SNVPPRVLKAMNRPMLG-----H-RSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGV   81 (356)
T ss_pred             cCCCHHHHHHhCCCccC-----C-CCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEec
Confidence            34578888888654322     1 112345556677777777778854 4578899999999999999999999999999


Q ss_pred             CCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          121 PYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       121 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      ++|++  +...++..|++++.+ |.+++ +.+|++++++.+++ +  +++|++++++||+|.+.|   +++|.++|+++|
T Consensus        82 ~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~i~~~~--~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~  154 (356)
T cd06451          82 NGVFGDRWADMAERYGADVDVV-EKPWG-EAVSPEEIAEALEQHD--IKAVTLTHNETSTGVLNP---LEGIGALAKKHD  154 (356)
T ss_pred             CCchhHHHHHHHHHhCCCeEEe-ecCCC-CCCCHHHHHHHHhccC--CCEEEEeccCCCcccccC---HHHHHHHHHhcC
Confidence            98876  456778899999999 87754 46899999999975 4  499999999999999999   888899999999


Q ss_pred             CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH----hhc-----------
Q 015768          198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK----VQD-----------  262 (400)
Q Consensus       198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~----~~~-----------  262 (400)
                      +++++|++++..   ..+......+.++++.|++|+++. +.++||++.+   +++++.+..    ...           
T Consensus       155 ~~li~D~~~~~g---~~~~~~~~~~~d~~~~s~~K~l~~-p~g~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (356)
T cd06451         155 ALLIVDAVSSLG---GEPFRMDEWGVDVAYTGSQKALGA-PPGLGPIAFS---ERALERIKKKTKPKGFYFDLLLLLKYW  227 (356)
T ss_pred             CEEEEeeehhcc---CccccccccCccEEEecCchhccC-CCCcceeEEC---HHHHHHHHhcCCCCceeecHHHHHhhh
Confidence            999999998732   222222233456778899999973 3468999998   677766653    000           


Q ss_pred             ----cCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCCCCCHH
Q 015768          263 ----NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       263 ----~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  334 (400)
                          ....+++...+.++..+++.. ....+...++..++++++.+.|++.+. .+..+   ..+.++++.++.. .+..
T Consensus       228 ~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~-~~~~  305 (356)
T cd06451         228 GEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGL-KLLAKPELRSPTVTAVLVPEG-VDGD  305 (356)
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCCceEEEECCCC-CCHH
Confidence                122234555555555555431 133566778888889999999988754 44322   2345567777643 3678


Q ss_pred             HHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +++..|.+++||.+.+|..+..++++|++++. ++++|++++++.|++++
T Consensus       306 ~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~  355 (356)
T cd06451         306 EVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL  355 (356)
T ss_pred             HHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            88888864449999998766566899999987 78999999999998875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.8e-32  Score=223.07  Aligned_cols=331  Identities=24%  Similarity=0.342  Sum_probs=263.4

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      +-|++.+.++..+++..++|+-++     +.    ..| +......++.++++-    -+++++++.+.-|+-+.+..++
T Consensus        38 a~G~~iv~ld~~e~~ryPdP~q~e-----fk----~~~-~d~rnk~ls~a~~~d----kpLt~dnic~GvGsDE~ID~ii  103 (375)
T KOG0633|consen   38 ALGRDIVKLDANENPRYPDPEQME-----FK----YVY-PDPRNKRLSDALAQD----KPLTSDNICVGVGSDELIDLII  103 (375)
T ss_pred             hcCCCceEeccccCCCCcCHHHcc-----cc----ccc-CCcccchhhhhcccC----CCCCccceEEecCcHHHHHHHH
Confidence            446788999998877766666533     11    113 223344444454443    3678999999999999999999


Q ss_pred             HHhcCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          107 LTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       107 ~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      ++.+.|| ++|+...|+|..+.-.+...+++++.+ |..++ ++++.|.+.+.++.+..+|++++++|+||||..+..+.
T Consensus       104 R~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkv-pl~pd-F~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~d  181 (375)
T KOG0633|consen  104 RCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKV-PLNPD-FSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDD  181 (375)
T ss_pred             hheecCCccceeecCCcceeEEEEeecCCceEEEe-cCCCC-ccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHH
Confidence            9999999 999999999988887788889999999 98875 78999999999986656899999999999999999888


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCC-ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      +.+|.+--.  |.++++||+|.+|...++. .+...+++.+++.++||.||++|+|+||-..+   .++++-+.....  
T Consensus       182 i~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~---~~ia~iln~~Ka--  254 (375)
T KOG0633|consen  182 ILKILEMPD--NGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP---LSIAEILNRAKA--  254 (375)
T ss_pred             HHHHHhCCC--CcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccccc---HHHHHHHHhccC--
Confidence            888886322  7999999999998864433 23446889999999999999999999999999   889998888775  


Q ss_pred             CcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCC-cccCCCCceEEEeeCCCCC-CCHHHHHHHHH
Q 015768          265 PICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEG-AVKGGEGAIYLWARLPEKH-LDDFEVVRWLA  341 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~  341 (400)
                      +++.+.+...++.+++... .+.+...++.+.+.+.++...|.++++. .+.++-.++|+.+++.... .-+..++.+++
T Consensus       255 PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~a  334 (375)
T KOG0633|consen  255 PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDA  334 (375)
T ss_pred             CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHH
Confidence            8888888888888899852 3667888899999999999999998773 4555656899999987532 12456777777


Q ss_pred             HhcCeEEe-CCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          342 HRHGVVVI-PGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       342 ~~~gi~v~-~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      .+.||.++ .|+-.++.+++|++.+.  +|+-.-+++.++++
T Consensus       335 t~~gVvVRfrgse~~c~G~lRitvGt--~EentvL~k~~K~~  374 (375)
T KOG0633|consen  335 TKMGVVVRFRGSEEGCKGYLRITVGT--PEENTVLMKCLKQF  374 (375)
T ss_pred             HhcceEEEEcCCccccceeEEEEcCC--cccchHHHHHHHhh
Confidence            88999996 55555678999999985  56666677777664

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.4e-30  Score=242.53  Aligned_cols=338  Identities=19%  Similarity=0.145  Sum_probs=257.9

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFV  103 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~  103 (400)
                      +++++.|+.+.... .|..|++++.++.....    .+.|..........++..+.+++..|.++ ++|+||+|+|++++
T Consensus        20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln   98 (405)
T COG0520          20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN   98 (405)
T ss_pred             CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence            56888998876555 68999999998774321    22232233223344455555555558884 99999999999999


Q ss_pred             HHHHHh---cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768          104 NIVLTL---CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (400)
Q Consensus       104 ~~~~~l---~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np  176 (400)
                      .+..++   .++||+|+++.-.|++..    ...+..|++++.+ |.+++| .++.|.++..+++++  |+|.+++.+|.
T Consensus        99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i-~~~~~g-~~~~~~~~~~i~~~T--klvais~vSn~  174 (405)
T COG0520          99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVI-PLDDDG-LLDLDALEKLITPKT--KLVALSHVSNV  174 (405)
T ss_pred             HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEE-ecCCCC-CcCHHHHHHhcCCCc--eEEEEECcccc
Confidence            999999   589999999999997744    4456679999999 888554 789999999998888  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      ||.+.|   +++|+++|+++|+++++|.+++..   ..+......+.+++++|.+|++. ++..+|.+..+   +++.+.
T Consensus       175 tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~---h~~idv~~l~~Df~afsgHKwl~-gP~GiGvLy~r---~~~l~~  244 (405)
T COG0520         175 TGTVNP---VKEIAELAHEHGALVLVDAAQAAG---HLPIDVQELGCDFLAFSGHKWLL-GPTGIGVLYVR---KELLEE  244 (405)
T ss_pred             ccccch---HHHHHHHHHHcCCEEEEECccccC---ccCCCchhcCCCEEEEccccccc-CCCceEEEEEc---hHHHhh
Confidence            999999   999999999999999999999833   23444455788999999999764 23458999999   788877


Q ss_pred             HHHhhc----------------------cCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768          257 LLKVQD----------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAV  313 (400)
Q Consensus       257 l~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~  313 (400)
                      +.....                      .-..+++.....++..+++..++ .+.++.++.+++.+++.+.|++++.+.+
T Consensus       245 l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i  324 (405)
T COG0520         245 LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEI  324 (405)
T ss_pred             cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence            733211                      11224566666666666654222 2567778888889999999999998888


Q ss_pred             cCCC---CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--------CCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          314 KGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       314 ~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      +++.   ....+.+.++.  .+..++...|. ++||.++.|..|..        +..+|+|++. +|++|++.+++.|++
T Consensus       325 ~g~~~~~r~~~vsF~v~~--~~~~dv~~~L~-~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~  401 (405)
T COG0520         325 YGPPDADRGGIVSFNVKG--IHPHDVATLLD-EKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKK  401 (405)
T ss_pred             ecCCcccCceEEEEEeCC--CCHHHHHHHHH-hCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            8765   35566666665  35888998775 78899999987743        3459999998 999999999999998


Q ss_pred             HHH
Q 015768          382 GLE  384 (400)
Q Consensus       382 ~l~  384 (400)
                      +.+
T Consensus       402 ~~~  404 (405)
T COG0520         402 ALA  404 (405)
T ss_pred             Hhh
Confidence            764

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=100.00  E-value=6.4e-31  Score=250.00  Aligned_cols=332  Identities=15%  Similarity=0.095  Sum_probs=233.4

Q ss_pred             CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a  101 (400)
                      +++.++|++++ ++++++|.+++++.+.+.....+      .|+......++++.+++++    |. ++.+++++ |+++
T Consensus        45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g~-~~~i~~~s-G~~a  118 (410)
T PRK13392         45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----GK-ESALLFTS-GYVS  118 (410)
T ss_pred             CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----CC-CCEEEECc-HHHH
Confidence            45688888765 88889999999998888653211      1222112344555555554    64 45555555 5688


Q ss_pred             HHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCC
Q 015768          102 FVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPS  177 (400)
Q Consensus       102 ~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~npt  177 (400)
                      +..++..+..  +|+.|++....|.++...++..|.++..+ +.+      +.+.+++.+..  ...+++|++++|+||+
T Consensus       119 ~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~-~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~t  191 (410)
T PRK13392        119 NDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVF-RHN------DLADLEEQLASVDPDRPKLIAFESVYSMD  191 (410)
T ss_pred             HHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCC
Confidence            8888887753  88988888888888888888889887766 432      44555555541  1234899999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Ccc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  252 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~  252 (400)
                      |.+.+   +++|.++|++||+++|+||+|+.+.++..  ...   ......+++++|+||++|++|   ||++++   ++
T Consensus       192 G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~---~~  262 (410)
T PRK13392        192 GDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS---AD  262 (410)
T ss_pred             ccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC---HH
Confidence            99999   88999999999999999999995444321  111   111234588899999998777   899887   78


Q ss_pred             HHHHHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC
Q 015768          253 FATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH  330 (400)
Q Consensus       253 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  330 (400)
                      +++.+......  .+...+++.+.++..+|+.. +......+++.++++++++.|++.+. .+.++. +.++.+.++.. 
T Consensus       263 ~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~~~-  338 (410)
T PRK13392        263 LIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL-KTSQTERDAHQDRVAALKAKLNANGI-PVMPSP-SHIVPVMVGDP-  338 (410)
T ss_pred             HHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-
Confidence            88877766543  23345667788777888742 22345567788889999999998764 555555 44544444421 


Q ss_pred             CCHHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          331 LDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       331 ~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+..++..+|++++||.+.++..+.   +..++|++++. .+++|++.+++.|.++++++
T Consensus       339 ~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~  398 (410)
T PRK13392        339 TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL  398 (410)
T ss_pred             HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence            1345788888767899999865443   34689999976 79999999999999987754

>PRK02948 cysteine desulfurase; Provisional

Probab=100.00  E-value=1.8e-31  Score=251.71  Aligned_cols=336  Identities=15%  Similarity=0.096  Sum_probs=242.9

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhcCCCC---CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSI---SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      +.|+.+... ++|+++++++.+++.....   ..+........+.+.+.+.+++.+|.++++|++++|+|+++..++.++
T Consensus         2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~   80 (381)
T PRK02948          2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL   80 (381)
T ss_pred             EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence            556665544 4678999999887764211   111111112344556666666666888999999999999999998887


Q ss_pred             c----CCCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768          110 C----DAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       110 ~----~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~  182 (400)
                      .    ++|++|+++..+|+++..   .++..|++++.+ |.+++ +.+|++++++.+++++  ++|++++|+||||.++|
T Consensus        81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~  156 (381)
T PRK02948         81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEI-PVDKS-GLIRLVDLERAITPDT--VLASIQHANSEIGTIQP  156 (381)
T ss_pred             HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEE-eeCCC-CCCCHHHHHHhcCCCC--EEEEEECCcCCcEeehh
Confidence            5    578999999988876654   456679999999 87755 4689999999987665  89999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH-HHHHHH--
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQLLK--  259 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~-~~~l~~--  259 (400)
                         +++|.++|+++|+++++|+++...   ..+......+.++++.|+||.+|.+|  +|+++.+.   ++ ...+..  
T Consensus       157 ---~~~I~~l~~~~~~~vivD~~~~~g---~~~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~---~~~~~~~~~~~  225 (381)
T PRK02948        157 ---IAEIGALLKKYNVLFHSDCVQTFG---KLPIDVFEMGIDSLSVSAHKIYGPKG--VGAVYINP---QVRWKPVFPGT  225 (381)
T ss_pred             ---HHHHHHHHHHcCCEEEEEChhhcc---ccccCcccCCCCEEEecHHhcCCCCc--EEEEEEcC---CCCCCCcccCC
Confidence               888999999999999999887633   22233334567899999999998666  68877663   22 111110  


Q ss_pred             --hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-Cc----eEEEeeCCCCCCC
Q 015768          260 --VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GA----IYLWARLPEKHLD  332 (400)
Q Consensus       260 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~----~~~~~~~~~~~~~  332 (400)
                        ......++++.+.+.++..+++...++.++..+++.++++++++.|++++. .+.... ..    .++.+.++.  .+
T Consensus       226 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~v~~~~~~~~~~~~i~~~~~~~--~~  302 (381)
T PRK02948        226 THEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPL-PIEVEGHSTSCLPHIIGVTIKG--IE  302 (381)
T ss_pred             CCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEeCCCccCcCCEEEEEeCC--CC
Confidence              111235678889999999998864456788889999999999999998864 222111 11    122223332  34


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .+++...| .++||.+..|..|..                   .+++|+|++. +|++|++.+++.|+++++++.+
T Consensus       303 ~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~  377 (381)
T PRK02948        303 GQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR  377 (381)
T ss_pred             HHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            67777766 588999998876421                   3689999998 8999999999999999887754

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.3e-30  Score=219.99  Aligned_cols=359  Identities=19%  Similarity=0.300  Sum_probs=264.9

Q ss_pred             chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHH----hhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768           16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKE----LVWDP----SISKYGADEGLPELRDALVKKLNQENKL   87 (400)
Q Consensus        16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~----~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~~   87 (400)
                      ...|.++-+-++. ++.|.++.|++..-  |++.+..+.    .+.++    ....|+.++|...+.++++..+.+.+|+
T Consensus        17 ~~lMdDl~d~Lrt-~g~imLggGNPa~i--Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygw   93 (417)
T COG3977          17 TQLMDDLNDGLRT-PGAIMLGGGNPARI--PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGW   93 (417)
T ss_pred             HHHHHHHHhhccC-CCceeeCCCCcccC--hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCC
Confidence            4556666655555 44899999986653  444443322    22222    2568999999999999999999999864


Q ss_pred             --CCCcEEEeCChHHHHHHHHHHhcC---CCC--EEEEe-CCCccchhHHHHhcCcEEEEecc---CCCCC---CCCCHH
Q 015768           88 --YKSSVMVTAGANQAFVNIVLTLCD---AGD--SVVMF-APYYFNSYMSFQMTGVTHILVGP---CSSKT---LHPDAD  153 (400)
Q Consensus        88 --~~~~i~~~~g~t~a~~~~~~~l~~---~gd--~vlv~-~p~~~~~~~~~~~~g~~~~~~~~---~~~~~---~~~~~e  153 (400)
                        +.++|.+|+|++.+.+.++..+..   .|+  .|+.+ .|.|-++.++--.-. ..+.++|   +.+.|   +.+|-+
T Consensus        94 nit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~  172 (417)
T COG3977          94 NITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFE  172 (417)
T ss_pred             CCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHH
Confidence              689999999999999999988853   242  45554 899988776432111 1122222   22333   566766


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFS  231 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~s  231 (400)
                      ++.  +.+.+  .+|+++.|.||||.++..+|+.+|-+++++||+++++|.+|+--..+  -+.......++.+.+.|+|
T Consensus       173 ~l~--i~e~~--g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLS  248 (417)
T COG3977         173 HLH--IGEST--GAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLS  248 (417)
T ss_pred             Hcc--ccccc--ceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehh
Confidence            654  33444  88999999999999999999999999999999999999999832211  0122344578999999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHH-----HHHHHHHH
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVR-----NREIIREA  304 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~-----~~~~l~~~  304 (400)
                      |. |+||.|+|.++..   +++++.+.......+..+..+..+.+..+++.++  ..-+++++...+     ....++..
T Consensus       249 K~-GLPG~R~GIiIan---e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~  324 (417)
T COG3977         249 KL-GLPGSRCGIIIAN---EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY  324 (417)
T ss_pred             hc-CCCCcceeEEEcc---HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence            95 6899999999999   8999999988877777888889999999999865  222344433333     23344445


Q ss_pred             hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---------CCCeEEEEeccCCHHHHHHH
Q 015768          305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------CRGHLRISFGGLVEDDCKAA  375 (400)
Q Consensus       305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------~~~~iRi~~~~~~~~~~~~~  375 (400)
                      |-+.++ .+..|+++.|.|+=+.+...+.++++++| +++|+.+.||..|-         ...++|++... ++++++.+
T Consensus       325 lp~~~~-~iHkpEGAIFlWLWf~dLPItt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~-~~~~ie~G  401 (417)
T COG3977         325 LPEYRC-LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP-EPEKIEKG  401 (417)
T ss_pred             cCccce-eeecCCcceeehhhhccCCCCHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccceEEEecCC-CHHHHHHH
Confidence            544444 66789999999998877667899999987 58999999999883         24689999886 89999999


Q ss_pred             HHHHHHHHHHHhcc
Q 015768          376 ADRLRRGLEELVKD  389 (400)
Q Consensus       376 ~~~l~~~l~~~~~~  389 (400)
                      +++|.+.+++..++
T Consensus       402 va~lae~ve~~yq~  415 (417)
T COG3977         402 VAILAEEVERAYQE  415 (417)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999987654

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=6.6e-31  Score=249.37  Aligned_cols=337  Identities=15%  Similarity=0.155  Sum_probs=240.7

Q ss_pred             hcCCCeEEcCCCC--CCCCC-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  +.++. +|.+.+++.+.+......   ......+.+.++++++.+..+  .+++++++|+++|+.
T Consensus        36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~la~~l~~~~~--~~~v~~~~gg~eA~~  110 (396)
T PRK02627         36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHT---SNLYYIEPQEELAEKLVELSG--MDKVFFCNSGAEANE  110 (396)
T ss_pred             CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccc---ccccCCHHHHHHHHHHHhhcC--CCEEEECCCcHHHHH
Confidence            5678899998875  44554 689999999988753211   112236788889998888765  479999999999999


Q ss_pred             HHHHHhcCCC-------CEEEEeCCCccchhHHHHhcCcEEEE---eccCCCCCC----CCCHHHHHHhhccCCCCeEEE
Q 015768          104 NIVLTLCDAG-------DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKTL----HPDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus       104 ~~~~~l~~~g-------d~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~~----~~~~e~l~~~l~~~~~~~~v~  169 (400)
                      .+++.+...+       ++|++..++|+++.......+.....   ..+.. .++    ..|++++++.+.++  +++|+
T Consensus       111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~vi  187 (396)
T PRK02627        111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITDK--TAAVM  187 (396)
T ss_pred             HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCCC--eEEEE
Confidence            9999775433       67999999998877554443322110   10222 121    12789999998654  49999


Q ss_pred             EeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          170 VVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       170 l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      +++++||+| ..++.+.+++|.++|++||+++|+||+|.++...+........+....+.++||.++ +|+|+||++.+ 
T Consensus       188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~-~G~rig~~~~~-  265 (396)
T PRK02627        188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLG-GGVPIGAVLAK-  265 (396)
T ss_pred             EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhh-CCcccEEEEEc-
Confidence            998899999 688999999999999999999999999998765443211111111111347899998 99999999998 


Q ss_pred             CcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh----ccCCCCcccCCCCceEEEe
Q 015768          249 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGEGAVKGGEGAIYLWA  324 (400)
Q Consensus       249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~~~~~~~~~~~~~~~  324 (400)
                        +++++.+.......+++.+++.+.++.++|+...+  .+..++.+++.+.+++.|    .+++.+....+ .+.++|+
T Consensus       266 --~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~i  340 (396)
T PRK02627        266 --EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE--EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMIGI  340 (396)
T ss_pred             --HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEEEE
Confidence              77888776555566788899999999999874221  223334444444444444    33433223333 3788898


Q ss_pred             eCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .++.   +..+++..++ ++||.+.|+.    .+++|++++. .+++++++++++|.++++++
T Consensus       341 ~~~~---~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        341 ELDR---PAAEIVKKAL-EKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             EecC---cHHHHHHHHH-HCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence            8842   5778888887 5699999864    4789999864 79999999999999998765

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=3.2e-31  Score=237.46  Aligned_cols=333  Identities=18%  Similarity=0.164  Sum_probs=255.7

Q ss_pred             CCcHHHHHHHHHhhcCCCCCC---CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh--c----CCC
Q 015768           43 QPPKMAMEKVKELVWDPSISK---YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL--C----DAG  113 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~---y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l--~----~~g  113 (400)
                      ++.|+|+++|..++.....++   +........+.+...+.+++..|+++++|+||+|+|++++.++...  .    +.|
T Consensus        12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~   91 (386)
T COG1104          12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKG   91 (386)
T ss_pred             CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCC
Confidence            457999999998887631111   1111122344555555566666999999999999999999999983  2    257


Q ss_pred             CEEEEeCCCccchhHHHHhc---CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          114 DSVVMFAPYYFNSYMSFQMT---GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       114 d~vlv~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      .+|+++.-.|+++.+.++.+   |+++.++ |++.+| .+|+++|+++|++++  .+|.+.+.||.+|.+.|   +.+|.
T Consensus        92 ~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl-~V~~~G-~v~~e~L~~al~~~T--~LVSim~aNnE~G~IQp---I~ei~  164 (386)
T COG1104          92 KHIITSAIEHPAVLNTCRYLERQGFEVTYL-PVDSNG-LVDLEQLEEALRPDT--ILVSIMHANNETGTIQP---IAEIG  164 (386)
T ss_pred             CeEEEcccccHHHHHHHHHHHhcCCeEEEe-CCCCCC-eEcHHHHHHhcCCCc--eEEEEEecccCeeeccc---HHHHH
Confidence            89999999999999888776   9999999 999887 689999999999887  99999999999999999   99999


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc--HHHHHHHHHhhccCCcCc
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--EGFATQLLKVQDNIPICA  268 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~--~~~~~~l~~~~~~~~~~~  268 (400)
                      ++|+++++++++|.++.   .+..+........++...|.||..|+.|  +|.++.+++.  ..++.--...+.....+.
T Consensus       165 ~i~k~~~i~fHvDAvQa---~Gkipi~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTe  239 (386)
T COG1104         165 EICKERGILFHVDAVQA---VGKIPIDLEELGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTE  239 (386)
T ss_pred             HHHHHcCCeEEEehhhh---cCceeccccccCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCc
Confidence            99999999999999998   4444444444457889999999998667  5776655321  011111112223345677


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC-CCCcccCC---CCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      |.+...++..+++...+.++....++.+++++|.+.|.+. +.+.+.+.   .-.+.+.+.++.  .+++.+...| +.+
T Consensus       240 nv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g--v~gE~ll~~L-~~~  316 (386)
T COG1104         240 NVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG--VEGESLLLAL-DLA  316 (386)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC--CcHHHHHHhc-ccc
Confidence            8888888888888755667888888999999999999975 55444332   234566677775  4688888766 688


Q ss_pred             CeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccC
Q 015768          345 GVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG  390 (400)
Q Consensus       345 gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~  390 (400)
                      ||.+..|+.|..                   .+.||||++. ++++|++.+++.+.++++.+++..
T Consensus       317 gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~  382 (386)
T COG1104         317 GIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELS  382 (386)
T ss_pred             CeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999999942                   3689999999 999999999999999999987643

>PLN02721 threonine aldolase

Probab=100.00  E-value=1.2e-30  Score=243.89  Aligned_cols=329  Identities=18%  Similarity=0.241  Sum_probs=230.1

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      .+++|+.+.++. +++.+.+++.+.........|  .....++++++++++    +.  +.+++++++++++..++.+++
T Consensus         6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~----~~--~~~~~~~~Gs~a~~~~l~~~~   76 (353)
T PLN02721          6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIF----GK--EAALFVPSGTMGNLISVLVHC   76 (353)
T ss_pred             hhhhhhcccccC-CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHh----CC--ceeEEecCccHHHHHHHHHHc
Confidence            467888888776 578888888764111112223  333678889988888    43  346777777888888888877


Q ss_pred             C-CCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-----CCCeEEEEeC-CCCCCccC
Q 015768          111 D-AGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVN-PGNPSGTY  180 (400)
Q Consensus       111 ~-~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-----~~~~~v~l~~-p~nptG~~  180 (400)
                      + +||+|++++|+|.....   .+...|++++.+ |.+++ +.+|+|.+++.+++.     +.+++|++++ ++||+|.+
T Consensus        77 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~  154 (353)
T PLN02721         77 DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTV-KNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRC  154 (353)
T ss_pred             cCCCCeEEEcCccceehhcccchhhhcCceeEec-CCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCcc
Confidence            7 99999999999976665   567789999988 77654 468999999999731     2348999987 47899999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeEE-EEccCCcHHHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQL  257 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~-i~~~~~~~~~~~~l  257 (400)
                      +|.+++++|.++|++||+++|+|++|......  +..........+.++.|+||+++.   +.|+ ++.+   +++++.+
T Consensus       155 ~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~---~~~~~~~  228 (353)
T PLN02721        155 LSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGS---KSFIRKA  228 (353)
T ss_pred             ccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecC---HHHHHhH
Confidence            99999999999999999999999998643211  111111112344566789999963   3465 5565   7888777


Q ss_pred             HHhhccCCcCccHHHHHH--HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCC-CCCH
Q 015768          258 LKVQDNIPICASIISQHL--ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK-HLDD  333 (400)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~  333 (400)
                      .........+++.....+  +...++   ++.. ..++..++++.+.+.|++++.+.+ ..+..++++|++++.. ..+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (353)
T PLN02721        229 KRLRKTLGGGMRQVGVLAAAALVALQ---ENVP-KLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITA  304 (353)
T ss_pred             HHHHHhcCCCeehhHHHHHHHHHHHH---HHHH-HHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccH
Confidence            665543332333222222  222332   2222 334446678889999998866433 3333367899998752 1257


Q ss_pred             HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ..++++|. ++||.+.|+.    ++++|++++. ++++++++++++|++++..
T Consensus       305 ~~~~~~L~-~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~  352 (353)
T PLN02721        305 EKLCKSLE-EHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT  352 (353)
T ss_pred             HHHHHHHH-hCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence            78888886 8999999874    6799999985 8999999999999987753

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=100.00  E-value=1.4e-30  Score=242.15  Aligned_cols=318  Identities=19%  Similarity=0.154  Sum_probs=228.3

Q ss_pred             CCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768           39 VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (400)
Q Consensus        39 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv  118 (400)
                      ++++++++.+++++.+.....  ..|++.....++++.+++++    |  ++++++++|+|+++..++.++.++||+|++
T Consensus         5 ~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~----g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~   76 (338)
T cd06502           5 DTVTGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF----G--KEAALFVPSGTAANQLALAAHTQPGGSVIC   76 (338)
T ss_pred             ccCCCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh----C--CCeEEEecCchHHHHHHHHHhcCCCCeEEE
Confidence            466778999999998865432  24545555555665555554    6  567888888999999999999999999999


Q ss_pred             eCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          119 FAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       119 ~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      +.|+|.....   ..+..|++++.+ +.+.  +.+|++.+++++++.     ..+++|++++|+|| |.+++.+++++|+
T Consensus        77 ~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~  152 (338)
T cd06502          77 HETAHIYTDEAGAPEFLSGVKLLPV-PGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS  152 (338)
T ss_pred             ecCcceeeecCCcHHHHcCceEEee-cCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence            9999977553   345579999988 7654  468999999998741     13599999999997 6677999999999


Q ss_pred             HHHHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--CCc
Q 015768          191 DLCKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--IPI  266 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--~~~  266 (400)
                      ++|++||+++|+|++|..+..  .+........+.++++.|+||++|++|  .++++.+   +++++.+......  .++
T Consensus       153 ~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~---~~~~~~~~~~~~~~~~~~  227 (338)
T cd06502         153 ALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGN---RDFIARARRRRKQAGGGM  227 (338)
T ss_pred             HHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc--ceEEECC---HHHHHHHHHHHHHhCCCh
Confidence            999999999999999864432  122111112344577889999998776  2345566   7888888765432  234


Q ss_pred             CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH--Hhc
Q 015768          267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA--HRH  344 (400)
Q Consensus       267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~  344 (400)
                      +.+.+.+.++..+|+.. .+ .+..+++.++++++.+.|++++. .+..+. ++++.+.++........+...+.  .++
T Consensus       228 ~~~~~~~~a~~~~L~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~l~~~~~~  303 (338)
T cd06502         228 RQSGFLAAAGLAALEND-LW-LRRLRHDHEMARRLAEALEELGG-LESEVQ-TNIVLLDPVEANAVFVELSKEAIERRGE  303 (338)
T ss_pred             hhHHHHHHHHHHHhcCc-hH-HHHHHHHHHHHHHHHHHHHhcCC-Cccccc-CCeEEEecCCccHHHHHHHHHHHHhhhC
Confidence            56677778888888752 33 45667888888999999999876 455444 66777776532111223333332  157


Q ss_pred             CeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       345 gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      |+.+.+..    .+++||+++. ++++|++++++++++
T Consensus       304 gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         304 GVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             CEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            99987743    3899999987 799999999998864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK10534 L-threonine aldolase; Provisional

Probab=100.00  E-value=4.9e-31  Score=244.32  Aligned_cols=319  Identities=16%  Similarity=0.179  Sum_probs=229.3

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD  111 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~  111 (400)
                      +|+|+++.++. ++|.+++++.+....  ...|++.....++++++++++    |++  .+++++|+++++..++.++++
T Consensus         1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~----g~~--~~~v~~~g~~a~~~~l~~~~~   71 (333)
T PRK10534          1 MIDLRSDTVTR-PSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS----GKE--AALFLPTGTQANLVALLSHCE   71 (333)
T ss_pred             CcccccccCCC-CCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh----CCC--eEEEeCchHHHHHHHHHHhcC
Confidence            47899988888 889999998775543  456877777889999999887    653  446888888999999889999


Q ss_pred             CCCEEEEeCCCccchhHH--HHhcC-cEEEEeccCCCCCCCCCHHHHHHhhccCC----CCeEEEEeCCCCCCccCCCHH
Q 015768          112 AGDSVVMFAPYYFNSYMS--FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       112 ~gd~vlv~~p~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~~~----~~~~v~l~~p~nptG~~~~~~  184 (400)
                      +||+|+++.|+|......  ....+ ++++.+ +.++ ++.+|++++++.+.++.    .+++|++++|+  +|.+++.+
T Consensus        72 ~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~  147 (333)
T PRK10534         72 RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPI-DAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPRE  147 (333)
T ss_pred             CCCeeEEechhhhhHhcCCchHHhcCceEEee-cCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHH
Confidence            999999998888532321  23344 677777 7664 46789999999886521    24899999765  59999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeE-EEEccCCcHHHHHHHHHhh
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQ  261 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~~~~l~~~~  261 (400)
                      ++++|+++|++|++++++||+|......  +............++.||||.+|++   +| |++++   +++++.+....
T Consensus       148 ~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~---~G~~~~~~---~~~i~~~~~~~  221 (333)
T PRK10534        148 YLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP---VGSLLVGN---RDYIKRARRWR  221 (333)
T ss_pred             HHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc---ccceEEcC---HHHHHHHHHHH
Confidence            9999999999999999999998743211  1111111111123334899998743   57 67777   88999888776


Q ss_pred             ccCC--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHH
Q 015768          262 DNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW  339 (400)
Q Consensus       262 ~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (400)
                      ....  .+.+.+.+.++..+|+.    ..+..++..++++++.+.|++++. .+..+. ++|++++++.  .+..++.+.
T Consensus       222 ~~~~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-~nfv~~~~~~--~~~~~~~~~  293 (333)
T PRK10534        222 KMTGGGMRQAGILAAAGLYALKH----NVARLQEDHDNAAWLAEQLREAGA-DVMRQD-TNMLFVRVGE--EQAAALGEY  293 (333)
T ss_pred             HHhCCchhhHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHhCCC-ccCCCC-ceEEEEECCc--hhHHHHHHH
Confidence            5333  22334556666666643    134444455677899999999865 666664 9999999974  135566654


Q ss_pred             HHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          340 LAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       340 l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      | +++||.+.|+.      ++|++.+. .|++++++++++|++++.
T Consensus       294 l-~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~  332 (333)
T PRK10534        294 M-RERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             H-HHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence            4 68999998863      58998753 799999999999987654

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=100.00  E-value=1.8e-30  Score=246.55  Aligned_cols=329  Identities=16%  Similarity=0.085  Sum_probs=235.1

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      .+.|+.+... ++|+.+++++.+.+....   ...|....+..+..+.+.+.+++.+|.++++|++++|+++++..++.+
T Consensus        18 ~~yl~~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~   96 (397)
T TIGR01976        18 RVFFDNPAGT-QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA   96 (397)
T ss_pred             eEEecCCccC-CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence            6888776544 367889999988876432   123433333344556666666666688777899999999999988877


Q ss_pred             h---cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          109 L---CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       109 l---~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      +   .+|||+|++..++|++..    ..++..|++++.+ +.+++++.++++++++.+++++  ++|++++|+||||.+.
T Consensus        97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~  173 (397)
T TIGR01976        97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWA-RVDEATGELHPDDLASLLSPRT--RLVAVTAASNTLGSIV  173 (397)
T ss_pred             HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEE-eccccCCCcCHHHHHHhcCCCc--eEEEEeCCCCCCCccC
Confidence            6   579999999999997754    3456689999998 8876445789999999998665  9999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  261 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~  261 (400)
                      |   +++|.++|++||+++++|+++...   ..+......+.+++++|++|++|   .++|+++.+   +++++.+....
T Consensus       174 ~---~~~i~~~~~~~~~~~ivD~a~~~~---~~~~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~---~~~~~~l~~~~  241 (397)
T TIGR01976       174 D---LAAITELVHAAGALVVVDAVHYAP---HGLIDVQATGADFLTCSAYKFFG---PHMGILWGR---PELLMNLPPYK  241 (397)
T ss_pred             C---HHHHHHHHHHcCCEEEEehhhhcc---ccCCCHHHcCCCEEEEechhhcC---CceEEEEEc---HHHHhhCCCcc
Confidence            9   899999999999999999998632   22222233456788899999985   358999988   67776665432


Q ss_pred             ccC----------CcCccHHHHHHHHHHhcC----Cc-----------HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768          262 DNI----------PICASIISQHLALYSLQT----GP-----------EWVTERVKDLVRNREIIREALSPLGEGAVKGG  316 (400)
Q Consensus       262 ~~~----------~~~~~~~~~~~~~~~l~~----~~-----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  316 (400)
                      ...          ..+++.....++..+++.    +.           .+.++..++..++++++++.|++++.+++..+
T Consensus       242 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~  321 (397)
T TIGR01976       242 LTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGV  321 (397)
T ss_pred             ccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence            111          123344444444333332    10           02455667777888999999998875565543


Q ss_pred             ----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----------CCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          317 ----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------CRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       317 ----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                          ..+.++.+.++.  .+..++.++|. ++||.+..|..|.           ..+++|+|++. +|++|++.+++.|
T Consensus       322 ~~~~~~~~~~~~~~~~--~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       322 ARLAARVPTVSFTVHG--LPPQRVVRRLA-DQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             CCccCCCceEEEEeCC--cCHHHHHHHHH-HCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence                124566666653  24677888775 7899999886553           24689999988 8999999888764

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=100.00  E-value=2.8e-30  Score=241.19  Aligned_cols=330  Identities=20%  Similarity=0.186  Sum_probs=235.6

Q ss_pred             CeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           31 NAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        31 ~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .+++|+++. ...+.||++++++.+.+++...  ..|....+.....+++.+.+++.++.+  +.++++++++++..++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~iv~~sg~~a~~~~~~   79 (349)
T cd06454           2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE--AALVFSSGYAANDGVLS   79 (349)
T ss_pred             CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC--CEEEeccHHHHHHHHHH
Confidence            467888876 6667789999999999976321  122222244455555555555555653  35666677789998889


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC---CCCeEEEEeCCCCCCccCCCHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK---PTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~---~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      ++.++||+|+++.|+|+++...++..|++++.+ +.      .+.+.+++++++.   ..++++++++++||+|...+  
T Consensus        80 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~--  150 (349)
T cd06454          80 TLAGKGDLIISDSLNHASIIDGIRLSGAKKRIF-KH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP--  150 (349)
T ss_pred             HhcCCCCEEEEehhhhHHHHHHHHHcCCceEEe-cC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC--
Confidence            999999999999999999988888899998877 42      3677888888742   33578888899999999998  


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCC--C---ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                       +++|.++|++||+++|+|++|+.+.....  .   ......+.+++++|+||.++.+|   ||++.+   +++.+.+..
T Consensus       151 -~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~---~~~~~~~~~  223 (349)
T cd06454         151 -LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS---KELIDYLRS  223 (349)
T ss_pred             -HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---HHHHHHHHH
Confidence             88999999999999999999975433211  1   11123466899999999997544   899887   677776655


Q ss_pred             hhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768          260 VQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       260 ~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      ....  ...+.+...+.++..+++...+ .+...+++.++++.+.+.|++++. .+..+.++.+.++.++.. .+..+++
T Consensus       224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~  300 (349)
T cd06454         224 YARGFIFSTSLPPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKELGF-PVGGSPSHIIPPLIGDDP-AKAVAFS  300 (349)
T ss_pred             hchhhhccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCC-cccCCCCCcEEEEeCCCh-HHHHHHH
Confidence            3321  2234566667677777764222 356678888999999999988754 444443355455544422 2467888


Q ss_pred             HHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      .+|. ++||.+.++....   ..+++|++++. ++++++++++++|+++
T Consensus       301 ~~L~-~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         301 DALL-ERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             HHHH-hCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            8886 5699998754321   24799999987 7999999999999764

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=2.4e-30  Score=244.54  Aligned_cols=336  Identities=15%  Similarity=0.174  Sum_probs=236.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+...  .+. ....+...++++.+.+..+  .+++++++|+++|++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~  102 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVE  102 (389)
T ss_pred             CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHH
Confidence            5678899998864  3343 689999999999876321  111 1123344566666665543  578999999999999


Q ss_pred             HHHHHh----cCCCC----EEEEeCCCccchhHHHHhcCcEEEEe---ccCCCCCCC----CCHHHHHHhhccCCCCeEE
Q 015768          104 NIVLTL----CDAGD----SVVMFAPYYFNSYMSFQMTGVTHILV---GPCSSKTLH----PDADWLEKTLETKPTPKLV  168 (400)
Q Consensus       104 ~~~~~l----~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~---~~~~~~~~~----~~~e~l~~~l~~~~~~~~v  168 (400)
                      .+++++    ..+||    +|++.+++|++........+......   .|.. .++.    .|++.+++.++++  +++|
T Consensus       103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~--~~av  179 (389)
T PRK01278        103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITPN--TAAI  179 (389)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCCC--eEEE
Confidence            999887    34565    89999999999886665544332221   0111 1111    4889999998764  4899


Q ss_pred             EEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768          169 SVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       169 ~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      +++.++|++| .+++.+++++|.++|++||+++|+||+|.++...+........+...-+.++||.++ +|+|+||++++
T Consensus       180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~G~~ig~~~~~  258 (389)
T PRK01278        180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG-GGFPLGACLAT  258 (389)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc-CCcceEEEEEc
Confidence            9997788888 788999999999999999999999999997765443211111111112458899998 89999999998


Q ss_pred             CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CC-CCcccCCCCceEE
Q 015768          248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LG-EGAVKGGEGAIYL  322 (400)
Q Consensus       248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~~~~~~~~~  322 (400)
                         +++++.+.......+++.+++.+.++.++|+..++  .+..++.+++.+++++.|+.    .+ .+....+. +.++
T Consensus       259 ---~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~-G~~~  332 (389)
T PRK01278        259 ---EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILA--PGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGK-GLLL  332 (389)
T ss_pred             ---HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecc-cEEE
Confidence               67777777666667888999999999888864211  12233344444444444433    33 22233343 6777


Q ss_pred             EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++.++.   +..+++.+|+ ++||.+.|+.    .+++||+++. .+++++++++++|.+++.+
T Consensus       333 ~i~~~~---~~~~~~~~l~-~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        333 GLKCVV---PNRDLVQALR-DEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             EEEEec---CHHHHHHHHH-HCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence            777753   4678888887 5699999863    5899999875 7999999999999999865

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=100.00  E-value=4.9e-30  Score=243.45  Aligned_cols=336  Identities=17%  Similarity=0.125  Sum_probs=237.9

Q ss_pred             CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCC--CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISK--YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++++++|++++ .++..+|++++++.+.+.+...+.  .....+.......+++.+++.+|.  +..++++++++|+..+
T Consensus        44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~--~~~l~~~sG~~an~~a  121 (402)
T TIGR01821        44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK--ESALVFTSGYVANDAT  121 (402)
T ss_pred             CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC--CeEEEECchHHHHHHH
Confidence            47789998876 888899999999999987643211  001112233344455555544463  4567777778999999


Q ss_pred             HHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015768          106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       106 ~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~  181 (400)
                      +..+..  +++.|+.....|.+....++..|+.+..+ +.      .|.+++++.++.  ...+++|++++|+||+|.+.
T Consensus       122 i~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~  194 (402)
T TIGR01821       122 LATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIF-RH------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA  194 (402)
T ss_pred             HHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc
Confidence            998865  67777777677777777788888877666 42      266777777762  11358999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      |   +++|.++|++||+++|+||+|+.+.++...  ..   ....+.+++++|+||++|++|   ||++++   +++++.
T Consensus       195 ~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~---~~~~~~  265 (402)
T TIGR01821       195 P---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS---RKLIDA  265 (402)
T ss_pred             C---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC---HHHHHH
Confidence            9   899999999999999999999854443211  11   111234788899999998777   899888   788888


Q ss_pred             HHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768          257 LLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       257 l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      +......  ++.+.++..+.++.++|+...+. ....+++.++++++.+.|++++. .+..+. +.++.+.++.. ....
T Consensus       266 l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~i~~~~~-~~a~  341 (402)
T TIGR01821       266 IRSYAPGFIFTTSLPPAIAAGATASIRHLKES-QDLRRAHQENVKRLKNLLEALGI-PVIPNP-SHIVPVIIGDA-ALCK  341 (402)
T ss_pred             HHHhCcCceecCcCCHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH-HHHH
Confidence            7754432  34456777788887887752222 44555667888999999988764 555555 55555665431 1245


Q ss_pred             HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++...|++++||.+.+..++.   +..++||+++. ++++|++++++.|+++++++
T Consensus       342 ~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       342 KVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             HHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            678777766799998765433   34689999987 89999999999999998764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=100.00  E-value=4.5e-30  Score=242.28  Aligned_cols=329  Identities=16%  Similarity=0.172  Sum_probs=240.2

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCC----CCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHHHHHHHHhc-----CC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYG----ADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVLTLC-----DA  112 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~----~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~~~~~~~l~-----~~  112 (400)
                      +++++|++++.+++.+.....++    +..+...++++++++... .+. ++++|++|+|+|++++.++.++.     ++
T Consensus        10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~   88 (382)
T TIGR03403        10 MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKG-INARDLDDIIITSCATESNNWVLKGVYFDEILKG   88 (382)
T ss_pred             CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHH-cCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccC
Confidence            35678999998888653211111    123456677777776543 344 68999999999999999998762     45


Q ss_pred             -CCEEEEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          113 -GDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       113 -gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                       +++|+++...|+++...   ++..|++++.+ |.++++ .+|++.+++.+++++  +++++++|+||||.++|   +++
T Consensus        89 ~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v-~~~~~g-~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~~~~---~~~  161 (382)
T TIGR03403        89 GKNHIITTEVEHPAVRATCAFLESLGVEVTYL-PINEQG-TITAEQVREAITEKT--ALVSVMWANNETGMIFP---IKE  161 (382)
T ss_pred             CCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE-ecCCCC-CCCHHHHHHhcccCC--eEEEEEcccCCCccccC---HHH
Confidence             47899998888776644   45689999999 887664 679999999998765  89999999999999999   788


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH---HHhhccCC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL---LKVQDNIP  265 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l---~~~~~~~~  265 (400)
                      |.++|+++|+++++|+++...   ..+......+.++++.|++|++|.+|  +|+++.++.. .+...+   ........
T Consensus       162 I~~la~~~g~~~ivD~a~~~g---~~~~~~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~-~~~p~~~g~~~~~~~~~  235 (382)
T TIGR03403       162 IGEICKERGVLFHTDAVQAIG---KIPVDVQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGV-ELTPLFHGGEHMGGRRS  235 (382)
T ss_pred             HHHHHHHcCCEEEEechhhcC---CCccCccccCCCEEEEcchhhCCCCc--eEEEEECCCC-CCCCcccCCCCCCCccc
Confidence            899999999999999998732   22223334456789999999887666  5777665421 111111   00111235


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      .+++.+.+.++..+++...+..+...++++++++++.+.|++++++.+..+.   ...++.+.++.  .+.+.+..+| .
T Consensus       236 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L-~  312 (382)
T TIGR03403       236 GTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKG--VEGEAMLWDL-N  312 (382)
T ss_pred             CCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCC--CCHHHHHHhh-c
Confidence            6678888888888887544556677788899999999999988776666543   13455566653  3577777776 5


Q ss_pred             hcCeEEeCCCccC-------------------CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          343 RHGVVVIPGGACG-------------------CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       343 ~~gi~v~~g~~~~-------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++||.++.|..|.                   ..+.+|+|++. +|++|++.+++.|+++++++..
T Consensus       313 ~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~  378 (382)
T TIGR03403       313 KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA  378 (382)
T ss_pred             cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8899999887662                   12579999998 9999999999999999887653

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=100.00  E-value=5.8e-30  Score=243.35  Aligned_cols=346  Identities=19%  Similarity=0.158  Sum_probs=242.5

Q ss_pred             HHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC------CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768           23 QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP------SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA   96 (400)
Q Consensus        23 ~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~   96 (400)
                      .......++.++|..+.+..  ++.|++++.+.+...      ....|....+.+.+++..++++++.+|.+...++++ 
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~-   88 (402)
T cd00378          12 KKENERQRETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPH-   88 (402)
T ss_pred             HHHHHHHHhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecC-
Confidence            33334446788888877664  689999998765321      122243445566777778888888888876555555 


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-----HHhcCcEEEEeccCCCC--CCCCCHHHHHHhhc-cCCCCeEE
Q 015768           97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-----FQMTGVTHILVGPCSSK--TLHPDADWLEKTLE-TKPTPKLV  168 (400)
Q Consensus        97 g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l~-~~~~~~~v  168 (400)
                      |+++|+..++.++.+|||+|+++.|+|+++...     ++..|.++..+ +.+.+  ++.+|++.+++.+. ++  ++++
T Consensus        89 sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~id~~~l~~~i~~~~--~~~v  165 (402)
T cd00378          89 SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESV-PYGVDPETGLIDYDALEKMALEFK--PKLI  165 (402)
T ss_pred             CcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEe-cCCcCcccCCcCHHHHHHHHHhCC--CCEE
Confidence            567999999999999999999999999876543     56678776666 55443  57889999999986 44  4899


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc-ccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE-YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      ++++++||  ...+   +++|.++|++||+++|+|++|. ++.+.+....... ..+++++|+||++  +|+|+||++.+
T Consensus       166 ~~~~~~~~--~~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l--~G~~gg~i~~~  237 (402)
T cd00378         166 VAGASAYP--RPID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTL--RGPRGGLILTR  237 (402)
T ss_pred             EecCcccC--CCcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCC--CCCCceEEEec
Confidence            88888765  4556   8899999999999999999974 3333332111122 3458899999987  67889999987


Q ss_pred             CCcHHHHHHHHHhhccCCcC-ccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEe
Q 015768          248 SEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWA  324 (400)
Q Consensus       248 ~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~  324 (400)
                      +  +++.+++.........+ +......++..++.... .+..++++++.++++++.+.|++++. .+. .+.+++++|+
T Consensus       238 ~--~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~v~v  314 (402)
T cd00378         238 K--GELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGF-KVVSGGTDNHLVLV  314 (402)
T ss_pred             c--HHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC-eEeecCCCCeEEEE
Confidence            4  47888887654332332 22233333344443212 24567788899999999999998865 443 4566899999


Q ss_pred             eCCCCCCCHHHHHHHHHHhcCeEEeCCCccC------CCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Q 015768          325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++....+...+.. +++++||.+.++..+.      .+.++|++++.     ++++|++.+++.|++++.+-
T Consensus       315 ~~~~~~~~~~~~~~-~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~  386 (402)
T cd00378         315 DLRPKGITGKAAED-ALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDA  386 (402)
T ss_pred             eCCccCCCHHHHHH-HHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhcc
Confidence            99753334555555 4568999997643221      34689999865     25899999999999877653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=100.00  E-value=8e-30  Score=239.09  Aligned_cols=351  Identities=13%  Similarity=0.110  Sum_probs=255.5

Q ss_pred             HHHHHHhcCCCeEEcCCCCC--CCCCc---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768           21 QIQELVRGAKNAVSLAQGVV--YWQPP---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT   95 (400)
Q Consensus        21 ~~~~~~~~~~~~i~~~~~~~--~~~~~---~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~   95 (400)
                      |...+.+.|.+.+.|..+++  ++..+   ..+.++..+++..+. ..|+...|..++++++++++    |  .+++++|
T Consensus         2 r~~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~----g--~~~vv~t   74 (431)
T cd00617           2 RERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF----G--FKHIIPT   74 (431)
T ss_pred             hHHHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH----C--CCeEEEc
Confidence            44566788899999999998  66555   366666677766553 45999999999999999998    3  3679999


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC---------CCCCCHHHHHHhhccC--CC
Q 015768           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETK--PT  164 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~e~l~~~l~~~--~~  164 (400)
                      +|+++|+..++.++++|||.| +++|.|..+...+...|+.++.+ +.++.         .+++|++.|++.++++  ..
T Consensus        75 ~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v-~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~  152 (431)
T cd00617          75 HQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDL-VIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN  152 (431)
T ss_pred             CCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEE-ecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence            999999999999999999987 68899999999999999999998 77632         3459999999999854  22


Q ss_pred             CeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEccccccc--cc-----CCCCccccCCCcEEEEeccccccCC
Q 015768          165 PKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTYEYF--MY-----DGRKHCCVEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       165 ~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~--~~-----~~~~~~~~~~~~~i~~~s~sK~~g~  236 (400)
                      +++|+++.|+||+ |.+++.+++++|.++|++||+++|+|+++...  .+     ++...... .+..+.++|++|.+.+
T Consensus       153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si-~ei~~e~~s~sd~~~m  231 (431)
T cd00617         153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI-AEIAREMFSYADGCTM  231 (431)
T ss_pred             ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH-HHHHHHhhccCCEEEE
Confidence            5889999999998 99999999999999999999999999996532  11     11111111 0111223455555544


Q ss_pred             Ccce------eEEEEccCCcHHHHHHHHHhh----ccCC-cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          237 MGWR------VGYIAYPSEVEGFATQLLKVQ----DNIP-ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       237 ~g~~------~G~i~~~~~~~~~~~~l~~~~----~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      +|++      .||+++++  ++++++++...    ...+ .+.+.....+++.+|++..+  .+..+...++++++.+.|
T Consensus       232 S~~K~~~~~~GG~i~~~d--~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~~r~~l~~~L  307 (431)
T cd00617         232 SAKKDGLVNIGGFLALRD--DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVEQVRYLGDRL  307 (431)
T ss_pred             EeecCCCCccceEEEeCc--HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence            4544      57999986  57888877432    1111 22344444454446654222  233333444668899999


Q ss_pred             ccCCCCcccCCCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeC-CCcc-C-----------CCCeEEEEec
Q 015768          306 SPLGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIP-GGAC-G-----------CRGHLRISFG  365 (400)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~-g~~~-~-----------~~~~iRi~~~  365 (400)
                      ++.|. .+..|.+++++|++.+...       .++.+++.+|+.+.||.+.. |... +           ....+|+++.
T Consensus       308 ~~~G~-~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p  386 (431)
T cd00617         308 DEAGV-PIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP  386 (431)
T ss_pred             HHCCC-CccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc
Confidence            99875 7777888999999976421       24788998999999999653 3311 0           1268999987


Q ss_pred             c--CCHHHHHHHHHHHHHHHHHH
Q 015768          366 G--LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       366 ~--~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +  -|.+.++..++.|...+++-
T Consensus       387 rr~~t~~~~~~~~~~~~~~~~~~  409 (431)
T cd00617         387 RRVYTQDHMDYVAAAVIALYERR  409 (431)
T ss_pred             ccccCHHHHHHHHHHHHHHHhhH
Confidence            6  78899999999888888764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=9.6e-31  Score=248.08  Aligned_cols=337  Identities=16%  Similarity=0.086  Sum_probs=240.4

Q ss_pred             hcCCCeEEcCCCC--CCCCC-cHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGV--VYWQP-PKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~~-~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~  100 (400)
                      .+|+.++||..+.  +.++. +|++.+++.+.+.+...  ..|..     ....++++++.+.++.+ ++++++++|+++
T Consensus        40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~-----~~~~~la~~l~~~~~~~~~~~v~~~~sgse  114 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFAT-----EPQIALAERLVELLGAPEGGRVFFCNSGAE  114 (398)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCC-----HHHHHHHHHHHHhCCCCCCCEEEEeCchHH
Confidence            4678899998874  45554 79999999998876321  23422     22346667776666643 579999999999


Q ss_pred             HHHHHHHHhcCCC-CEEEEeCCCccchhHHHHh-cCcEEEEe--ccCCCCCC---CCCHHHHHHhhccCCCCeEEEEeCC
Q 015768          101 AFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQM-TGVTHILV--GPCSSKTL---HPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus       101 a~~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~-~g~~~~~~--~~~~~~~~---~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      |+..+++.+..+| +.|+..+++|+++...... .|......  .+...+-.   ..|++.+++.+.++  +++|+++.+
T Consensus       115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~aviiep~  192 (398)
T PRK03244        115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDD--TAAVFLEPI  192 (398)
T ss_pred             HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCC--eEEEEEecc
Confidence            9999999877666 5778888899887644332 22111100  01100000   12788999888643  589999988


Q ss_pred             CCCCccCCCH-HHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768          174 GNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  250 (400)
Q Consensus       174 ~nptG~~~~~-~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~  250 (400)
                      +||+|.+++. +++++|.++|++||+++|+||+|.++...+.....  .....+  +.++||++| +|+|+|+++.+   
T Consensus       193 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD--i~t~sK~l~-~G~~ig~~~~~---  266 (398)
T PRK03244        193 QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD--VVTLAKGLG-GGLPIGACLAF---  266 (398)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC--EEEEchhhh-CCcccEEEEEc---
Confidence            9999998865 45999999999999999999999876554432211  111122  347899998 89999999999   


Q ss_pred             HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccCCCCceEEEeeCCC
Q 015768          251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGEGAIYLWARLPE  328 (400)
Q Consensus       251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~~~~~~  328 (400)
                      +++++.+.......+++.+++.+.++.++|+...+  .+..++++++.+++++.|++++.  +..... .++++++.++.
T Consensus       267 ~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~~~i~~~~  343 (398)
T PRK03244        267 GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS--EGLLENAERLGEQLRAGIEALGHPLVDHVRG-RGLLLGIVLTA  343 (398)
T ss_pred             HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhcCCCceeeEee-ccEEEEEEEec
Confidence            67888776555566788999999999999874211  24556677778888888887543  112223 47889998864


Q ss_pred             CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .  ...++...+. ++||.+.+.    .++.+|++++. .+++|+++++++|.+++++.
T Consensus       344 ~--~~~~~~~~l~-~~Gv~~~~~----~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~  395 (398)
T PRK03244        344 P--VAKAVEAAAR-EAGFLVNAV----APDVIRLAPPLIITDAQVDAFVAALPAILDAA  395 (398)
T ss_pred             c--HHHHHHHHHH-HCCeEEeec----CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence            2  3567777775 789999874    25889999887 89999999999999999864

>PLN02409 serine--glyoxylate aminotransaminase

Probab=100.00  E-value=9.1e-30  Score=240.66  Aligned_cols=327  Identities=17%  Similarity=0.110  Sum_probs=248.8

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      ..+++|++++.+.+.     .| ...+..++.+++.+.+++.+|.++ +.+++++++|++++.++..+.++||+|+++++
T Consensus        19 ~~~~~V~~a~~~~~~-----~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~   92 (401)
T PLN02409         19 NIPERVLRAMNRPNE-----DH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRI   92 (401)
T ss_pred             CCCHHHHHHhcCCCC-----CC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCC
Confidence            356777777655432     22 345667899999999999999875 56788899999999999999999999999999


Q ss_pred             Cccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          122 YYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       122 ~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      +|++.  ...++..|++++.+ +.+.++ .++++.+++.+++.  +.+++|++++++||||.++|.+++.++.+ |+++|
T Consensus        93 ~~~~~~~~~~~~~~g~~v~~v-~~~~~~-~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g  169 (401)
T PLN02409         93 GQFSLLWIDQMQRLNFDVDVV-ESPWGQ-GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHP  169 (401)
T ss_pred             CchhHHHHHHHHHcCCceEEE-ECCCCC-CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhccC
Confidence            99765  46678889999999 776443 47899999999852  13699999999999999999444444444 99999


Q ss_pred             CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc---------------
Q 015768          198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD---------------  262 (400)
Q Consensus       198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~---------------  262 (400)
                      +++++|++++.   +..+......+.++++.|.+|+++. +.++||++.+   ++..+++.....               
T Consensus       170 ~~~vvD~v~s~---g~~~id~~~~~~D~~~~s~~K~l~~-P~G~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (401)
T PLN02409        170 ALLLVDGVSSI---GALDFRMDEWGVDVALTGSQKALSL-PTGLGIVCAS---PKALEASKTAKSPRVFFDWADYLKFYK  242 (401)
T ss_pred             cEEEEEccccc---CCccccccccCccEEEEcCccccCc-CCCcceeEEC---HHHHHHHhcCCCCCeecCHHHHHHHHh
Confidence            99999999883   2333333445677999999999963 3469999988   677776653210               


Q ss_pred             ---cCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCCCCHH
Q 015768          263 ---NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHLDDF  334 (400)
Q Consensus       263 ---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  334 (400)
                         ...++++...+.++..+++.. +...+++.++++++++++++.|++++. ++..+.    +...+++.+|.. .+..
T Consensus       243 ~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~-~~~~~~~~~~s~~v~~~~~p~~-~~~~  320 (401)
T PLN02409        243 LGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGL-KLCTKKPEWRSDTVTAVVVPEG-IDSA  320 (401)
T ss_pred             cCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcccceEEEeCCCC-CCHH
Confidence               114467777788888877742 234677888899999999999988764 444321    234566777754 3677


Q ss_pred             HHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          335 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ++...+.+++||.+.+|........+||+... ++.+++..++.+|.+++.++-
T Consensus       321 ~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g  374 (401)
T PLN02409        321 EIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG  374 (401)
T ss_pred             HHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            88888888999999998865567899999776 999999999999999998754

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.98  E-value=1.3e-29  Score=237.47  Aligned_cols=318  Identities=17%  Similarity=0.196  Sum_probs=221.0

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCC---CCC----CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 015768           44 PPKMAMEKVKELVWDPSISKYG---ADE----GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV  116 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~---~~~----g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~v  116 (400)
                      .+..+.+++.++........+.   ...    ....+++.+++++    |.+  .+.+++|+++++..++.++.++||.|
T Consensus        20 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~----g~~--~~~i~~g~~~a~~~~~~~l~~~gd~V   93 (370)
T TIGR02539        20 LTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL----GMD--EARVTHGAREGKFAVMHALCKEGDWV   93 (370)
T ss_pred             CcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh----CCC--ceEEECChHHHHHHHHHHhhCCCCEE
Confidence            4566677776664422111110   111    1334455555554    654  56778999999999999999999999


Q ss_pred             EEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          117 VMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       117 lv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      +++.+.|++....++..|++++.+ |.++ .++.+|++++++.+.+.     ..+++|++++|+||+|...+   +++|.
T Consensus        94 l~~~~~h~s~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~  169 (370)
T TIGR02539        94 VLDGLAHYTSYVAAERAGLNVKEV-PHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVA  169 (370)
T ss_pred             EECCcccHHHHHHHHHcCCEEEEE-ecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHH
Confidence            999999888888889999999999 7653 34678999999998631     13589999999999999999   88889


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc----
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI----  266 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~----  266 (400)
                      ++|+++|+++|+|++|+.+..   +......+.+++++|+||+++ +|.|+||++++   +++++.+......+.+    
T Consensus       170 ~la~~~~~~livDea~~~g~~---~~~~~~~~~di~v~s~sK~~~-~~g~~G~l~~~---~~~i~~l~~~~~~~~~~~~~  242 (370)
T TIGR02539       170 KVCREKGVPLLLNCAYTVGRM---PVSAKEIGADFIVGSGHKSMA-ASGPCGVLGMS---EEWEDIVLRKSRYSPVKEVE  242 (370)
T ss_pred             HHHHHcCCeEEEECccccCCc---CCCHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhhcccccCCccceee
Confidence            999999999999999996422   111222346688899999998 56789999998   7888888765542222    


Q ss_pred             ----CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc--cCCCCceEEEeeCCCCC-------CCH
Q 015768          267 ----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEKH-------LDD  333 (400)
Q Consensus       267 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~  333 (400)
                          +.......++..++....+++..+.+ ..++++++++.|++++. .+  ..+..++|++++++...       .+.
T Consensus       243 ~~~~~~~~~~~~~~~~al~~~~~~l~~~~~-~~~~~~~l~~~L~~~g~-~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~  320 (370)
T TIGR02539       243 LLGCTSRGAPIVTMMASFPHVVERVKRWDE-EVKKTRWFVAELEDIGF-IQLGQKPKEHDLVKFETPGFHEIAQKHKRRG  320 (370)
T ss_pred             eecccccccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCc-EEEccCCCcCceEEEECCchhHHhhhhcccc
Confidence                11112444444455432233333333 34445689999999875 43  23445888888876310       123


Q ss_pred             HHHHHHHHHhcCeE-EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVV-VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       334 ~~~~~~l~~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ..+.+.|. ++||. ++++    .++++|+++...++++++++++.|++++++
T Consensus       321 ~~~~~~L~-e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~  368 (370)
T TIGR02539       321 YFLYEELK-KRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE  368 (370)
T ss_pred             HHHHHHHH-hCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence            35676664 78997 6543    356999996335899999999999988765

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.98  E-value=8.6e-30  Score=240.19  Aligned_cols=330  Identities=14%  Similarity=0.119  Sum_probs=235.6

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEE
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGDSV  116 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~---~~gd~v  116 (400)
                      ++|++|++++.+.+.......+...   ....+..+++.+.+++.+|+++++|++|+|+|++++.++.++.   .+|++|
T Consensus        10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~v   89 (379)
T TIGR03402        10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHI   89 (379)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeE
Confidence            4578999999888764211111111   1113345556666777779888999999999999999998864   456899


Q ss_pred             EEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015768          117 VMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC  193 (400)
Q Consensus       117 lv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~  193 (400)
                      +++..+|+++...   ++..|++++.+ |.++++ .+|++++++.+++++  +++++++++||||.++|   +++|.++|
T Consensus        90 v~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~g-~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~~---~~~I~~l~  162 (379)
T TIGR03402        90 ITTAVEHPAVLSLCQHLEKQGYKVTYL-PVDEEG-RLDLEELRAAITDDT--ALVSVMWANNETGTIFP---IEEIGEIA  162 (379)
T ss_pred             EEcccccHHHHHHHHHHHHcCCEEEEE-ccCCCC-cCCHHHHHHhcCCCc--EEEEEEcccCCeeeccc---HHHHHHHH
Confidence            9999999876643   44569999999 876554 689999999998765  99999999999999999   78899999


Q ss_pred             HHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH---hhccCCcCccH
Q 015768          194 KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK---VQDNIPICASI  270 (400)
Q Consensus       194 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~---~~~~~~~~~~~  270 (400)
                      +++|+++++|++++..   ..+......+.++++.|.+|.+|.+|  +|+++.+... .+...+..   .......+++.
T Consensus       163 ~~~g~~vivD~~~~~g---~~~~~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~-~~~p~~~g~~~~~~~~~gt~~~  236 (379)
T TIGR03402       163 KERGALFHTDAVQAVG---KIPIDLKEMNIDMLSLSGHKLHGPKG--VGALYIRKGT-RFRPLLRGGHQERGRRAGTENV  236 (379)
T ss_pred             HHcCCEEEEECccccc---ccccCcccCCCCEEEEcHHHcCCCCc--eEEEEECCCC-CCCCcccCCccCCCcCCCCccH
Confidence            9999999999999842   23333334567788999999666445  6777666321 11000100   00112446677


Q ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCC---ceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      +...++..+++...++.++..++++++++++++.|++ ++.+.+.++..   ...+.+.++.  .+.+++...| +++||
T Consensus       237 ~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~gI  313 (379)
T TIGR03402       237 PGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY--IEGEAILLLL-DMEGI  313 (379)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC--CCHHHHHHhh-ccCCE
Confidence            7777777777754566777778888899999999885 66655544321   1122222232  2567888766 58899


Q ss_pred             EEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          347 VVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       347 ~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .+.+|..|..                   ++.+|+|++. +|++|++++++.|+++++++.+
T Consensus       314 ~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~  375 (379)
T TIGR03402       314 CASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA  375 (379)
T ss_pred             EEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999987732                   3689999999 9999999999999999987654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PLN02483 serine palmitoyltransferase

Probab=99.98  E-value=2.9e-29  Score=241.34  Aligned_cols=334  Identities=16%  Similarity=0.162  Sum_probs=233.0

Q ss_pred             CCCeEEcCCCC-CCCC-CcH----HHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           29 AKNAVSLAQGV-VYWQ-PPK----MAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~-~~~----~v~~a~~~~~~~--~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      +++.++|++.+ ..+. +++    .+.+++.+.-..  .....|+......++++.+|+++    | .++.+++++ ++.
T Consensus        99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~----g-~~~ai~~~~-G~~  172 (489)
T PLN02483         99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV----G-KPAAIVFGM-GYA  172 (489)
T ss_pred             CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh----C-CCcEEEECC-HHH
Confidence            56789998865 6664 334    444444443222  11223555666777888888877    5 345666655 567


Q ss_pred             HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-------cC---CCCeEEEE
Q 015768          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-------TK---PTPKLVSV  170 (400)
Q Consensus       101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-------~~---~~~~~v~l  170 (400)
                      ++..++.++.++||.|++++++|+++...++..|++++.+ +.+      |.+++++.++       ++   +..+++++
T Consensus       173 an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~-~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~liv  245 (489)
T PLN02483        173 TNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVF-QHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVI  245 (489)
T ss_pred             HHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhhhhccccccccCCceEEEE
Confidence            7778888899999999999999999999999999999988 643      4555655543       11   11255555


Q ss_pred             e-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--C---cccc-CCCcEEEEeccccccCCCcceeEE
Q 015768          171 V-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCV-EGDHVVNLFSFSKAYGMMGWRVGY  243 (400)
Q Consensus       171 ~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~-~~~~~i~~~s~sK~~g~~g~~~G~  243 (400)
                      + ...|++|.+.+   +++|.++|++||+++|+||+|+.+..+..  .   .... ..+.+++++|+||++|+.|   ||
T Consensus       246 ve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~  319 (489)
T PLN02483        246 VEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GY  319 (489)
T ss_pred             ECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eE
Confidence            5 45799999999   99999999999999999999985433211  1   1111 2357899999999998666   99


Q ss_pred             EEccCCcHHHHHHHHHhhccC--CcCccHHHHHHHHHHhc-----CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768          244 IAYPSEVEGFATQLLKVQDNI--PICASIISQHLALYSLQ-----TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  316 (400)
Q Consensus       244 i~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  316 (400)
                      ++++   +++++.+.......  ..+.+++...++..+|+     .+.+...+++++++++++.+++.|++++. .+.++
T Consensus       320 i~~~---~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~-~v~~~  395 (489)
T PLN02483        320 IAGS---KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF-EVLGD  395 (489)
T ss_pred             EEcC---HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC-cccCC
Confidence            9988   88999888754322  22234444444455553     12234456678899999999999999865 56555


Q ss_pred             CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .++..+++.+.... +..++..+|+ ++||.+.+..++.   ..+.+||+++. ++++++++++++|+++++.+.
T Consensus       396 ~~sp~~~l~l~~~~-~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~  468 (489)
T PLN02483        396 NDSPVMPIMLYNPA-KIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG  468 (489)
T ss_pred             CCCCEEEEEECCHH-HHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            54566665544321 3557888887 6899999743322   23689999987 899999999999999988764

>PRK07179 hypothetical protein; Provisional

Probab=99.98  E-value=2.6e-29  Score=238.70  Aligned_cols=330  Identities=18%  Similarity=0.159  Sum_probs=233.3

Q ss_pred             cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC-----CCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI-----SKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~-----~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      .++.+++|++.+ .++..+|++++++.+.+.+...     ..+. ......++++.+++++    |.  +.+++++|+++
T Consensus        52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~--~~~~~~~sG~~  125 (407)
T PRK07179         52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----GF--ESCLLCQSGWA  125 (407)
T ss_pred             CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----CC--CcEEEECCHHH
Confidence            457789998865 8888899999999998865211     1111 1112344555555544    64  46788999999


Q ss_pred             HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~  180 (400)
                      |+..++.++..+||.|++..++|.+....++..|++++.+ +.      .|++++++.+++.+ +++|++++++||+|.+
T Consensus       126 An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~-~~lV~v~~v~n~tG~i  197 (407)
T PRK07179        126 ANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPF-RH------NDVDHLRRQIERHG-PGIIVVDSVYSTTGTI  197 (407)
T ss_pred             HHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEe-cC------CCHHHHHHHHHhcC-CeEEEECCCCCCCCcc
Confidence            9999999999999999999999999988888889887766 32      38899999887532 4888888999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      .|   +++|.++|+++|+++|+||+|+.+..+...  ..   ......++++.|+||++|   .|+|+++++   +++++
T Consensus       198 ~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~---~~~~~  268 (407)
T PRK07179        198 AP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCP---RELAE  268 (407)
T ss_pred             cc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeC---HHHHH
Confidence            99   888999999999999999999854433221  11   111234688999999996   258999988   67777


Q ss_pred             HHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          256 QLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       256 ~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      .+......  .+.+.++....++.++++.. +...+.+++++++++++++.|++++. .+. .. +.++++.++... +.
T Consensus       269 ~~~~~~~~~~~~~t~~~~~~aa~~aal~~~-~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~-~~-~~i~~l~~~~~~-~~  343 (407)
T PRK07179        269 YVPFVSYPAIFSSTLLPHEIAGLEATLEVI-ESADDRRARLHANARFLREGLSELGY-NIR-SE-SQIIALETGSER-NT  343 (407)
T ss_pred             HHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCC-CC-CCEEEEEeCCHH-HH
Confidence            66543321  22333344444444445431 22345678889999999999998854 444 33 567777765321 24


Q ss_pred             HHHHHHHHHhcCeEEeCCCcc---CCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..+...| .++||.+..-...   ..++.+||+++. +|++|++++++.|++++.+.
T Consensus       344 ~~~~~~L-~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        344 EVLRDAL-EERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             HHHHHHH-HHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            5566655 4789984311111   135799999997 89999999999999988765

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.98  E-value=3.1e-29  Score=238.42  Aligned_cols=336  Identities=16%  Similarity=0.112  Sum_probs=236.5

Q ss_pred             CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++++++|++++ ..++.+|++++++.+.+.+...+..+  ...+.......+++.+++.+|.  +..+++++|++++..+
T Consensus        45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~--~~~~~~~sG~~an~~a  122 (407)
T PRK09064         45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK--EAALVFTSGYVSNDAT  122 (407)
T ss_pred             CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC--CcEEEECcHHHHHHHH
Confidence            47899998876 78888999999999888764221100  1112344444555555555563  3455556667898888


Q ss_pred             HHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015768          106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       106 ~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~  181 (400)
                      +..+..  +++.|+.....|.+....++..++++..+ +.      .|++++++.++..  ..+++|++++++|++|.+.
T Consensus       123 i~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~  195 (407)
T PRK09064        123 LSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIF-RH------NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA  195 (407)
T ss_pred             HHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc
Confidence            887764  77777777777777777777788776666 43      2678888877621  2358999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCC--CCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      +   +++|.++|++||+++|+||+|+.+.++.  ....   ......+++++|+||++|+.|   ||++++   +++++.
T Consensus       196 ~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~---~~~~~~  266 (407)
T PRK09064        196 P---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS---AALVDA  266 (407)
T ss_pred             C---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC---HHHHHH
Confidence            9   8999999999999999999998443332  1111   111245788999999998766   999888   788887


Q ss_pred             HHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768          257 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       257 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      +.......  +.+.++..+.++..+++...+ ....++++.++++++.+.|++++. .+..+. +.++.+.++.. ....
T Consensus       267 l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~iv~i~~~~~-~~~~  342 (407)
T PRK09064        267 VRSYAPGFIFTTSLPPAIAAAALASIRHLKE-SNEERERHQERAAKLKAALDAAGI-PVMPNE-SHIVPVMVGDP-EKCK  342 (407)
T ss_pred             HHHhCccccccCcCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-HHHH
Confidence            76544322  344566677777777764222 134457788889999999998764 555554 56666666531 1356


Q ss_pred             HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++..+|++++||.+.+...+.   +.+++||+++. ++++|++.+++.|+++++++
T Consensus       343 ~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~  398 (407)
T PRK09064        343 KASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL  398 (407)
T ss_pred             HHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            788888766799998765443   23689999987 89999999999999998765

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.98  E-value=2.2e-29  Score=235.96  Aligned_cols=301  Identities=15%  Similarity=0.140  Sum_probs=224.8

Q ss_pred             CcHHHHHHHHHHHHhhcCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCC
Q 015768           69 GLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCS  144 (400)
Q Consensus        69 g~~~~~~~~a~~l~~~~~~~~--~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~  144 (400)
                      ....+.+.+.+.+++.+|+++  +.|++|+|+|++++.++.++..+||.+++..+++++.  ...++..|++++.+ +.+
T Consensus        32 ~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v-~~~  110 (363)
T TIGR02326        32 DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVV-DTG  110 (363)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEE-eCC
Confidence            345566666677777778875  3799999999999999999988888887776666555  36678889999988 876


Q ss_pred             CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV  224 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  224 (400)
                      +++ .+|++.+++.++.++..+++.+++++||||.++|   +++|.++|++||+++++|++++.   +..+......+.+
T Consensus       111 ~~~-~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~---g~~~~~~~~~~~D  183 (363)
T TIGR02326       111 EVE-PPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF---GGIPIDIAELHID  183 (363)
T ss_pred             CCC-CCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc---cCcccchhhcCcc
Confidence            544 6799999999986554678888999999999999   89999999999999999998873   3333333445677


Q ss_pred             EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh------------------hccCCcCccHHHHHHHHHHhcCCc-H
Q 015768          225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV------------------QDNIPICASIISQHLALYSLQTGP-E  285 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~------------------~~~~~~~~~~~~~~~~~~~l~~~~-~  285 (400)
                      ++++|++|+++ ++.++|+++.+   ++..+++...                  .....++++.+.+.++..+++... +
T Consensus       184 ~~~~s~~K~l~-~p~G~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~  259 (363)
T TIGR02326       184 YLISSANKCIQ-GVPGFGFVIAR---QAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKE  259 (363)
T ss_pred             EEEecCccccc-cCCcceEEEEC---HHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHh
Confidence            99999999984 33347999988   5665554311                  011245677788888777775421 2


Q ss_pred             -HHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeE
Q 015768          286 -WVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHL  360 (400)
Q Consensus       286 -~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i  360 (400)
                       ..++..+++.++++++++.|++++. ....+   .++...++.++.. ..+..++...|. ++||.+.+|..+ ..+++
T Consensus       260 g~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~-~~gi~v~~g~~~-~~~~i  336 (363)
T TIGR02326       260 GGVAARHQRYQQNQKTLVAGMRALGF-EPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK-EQGFVIYPGKVS-QVDCF  336 (363)
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCceEEEEECCCCCCCCHHHHHHHHH-HCCEEEECCcCC-CCCEE
Confidence             2566778899999999999988865 33322   3345667777753 135677887774 789999998765 35799


Q ss_pred             EEEe-ccCCHHHHHHHHHHHHHHHH
Q 015768          361 RISF-GGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       361 Ri~~-~~~~~~~~~~~~~~l~~~l~  384 (400)
                      |+++ +.++.++++.+++.|++++.
T Consensus       337 Ri~~~~~~~~edv~~~l~~l~~~l~  361 (363)
T TIGR02326       337 RIGNIGEVDAADITRLLTAIGKAMY  361 (363)
T ss_pred             EEecCCCCCHHHHHHHHHHHHHHhC
Confidence            9996 44899999999999988753

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.98  E-value=3.8e-30  Score=245.72  Aligned_cols=342  Identities=17%  Similarity=0.171  Sum_probs=242.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|++++||..+.  ..++ .+|++++++.+.+...  ..|....+..+...++++.+.+.++.+.+++++++|+++|+.
T Consensus        33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~  110 (413)
T cd00610          33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVE  110 (413)
T ss_pred             CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence            4688999999873  4565 8899999999998653  233332235667778888888777777899999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHHhcC-------------cEEEEeccCCCC-----CCCCCHHHHHHhhccC-
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSK-----TLHPDADWLEKTLETK-  162 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~-----~~~~~~e~l~~~l~~~-  162 (400)
                      .+++.+.  .++++|++.+++|++........+             .+++.+ |.++.     .+..|++.+++.++.. 
T Consensus       111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~  189 (413)
T cd00610         111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHV-PYPYRYRPPAELADDLEALEEALEEHP  189 (413)
T ss_pred             HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEe-CCCccccchhhHHHHHHHHHHHHhcCC
Confidence            9999884  578999999999999765443321             134555 54421     1234788999888752 


Q ss_pred             CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee
Q 015768          163 PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV  241 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~  241 (400)
                      ..+++++++..++++|.+. +.+++++|.++|++||+++|+||+|..+...+........+....+.|+||+++ +|+|+
T Consensus       190 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~-~g~~~  268 (413)
T cd00610         190 EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLG-GGLPL  268 (413)
T ss_pred             CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEccccc-Ccccc
Confidence            2246666665577889865 777899999999999999999999987643332211111111222458899998 58999


Q ss_pred             EEEEccCCcHHHHHHH--HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC----CcccC
Q 015768          242 GYIAYPSEVEGFATQL--LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE----GAVKG  315 (400)
Q Consensus       242 G~i~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~  315 (400)
                      ||++.+   +++++.+  .......+++.+++.+.++.++++...+  .+..+++.++.+++++.|+.+..    .....
T Consensus       269 g~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  343 (413)
T cd00610         269 GAVLGR---EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRELAEKHPLVGDVR  343 (413)
T ss_pred             EEEEEc---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEee
Confidence            999988   7888876  3334445777888888888877764211  34566677777777777776422    11122


Q ss_pred             CCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      + .+.++++.++...       .....+...|. ++||.+.|+.    ++.+|++++. ++++++++++++|.+++
T Consensus       344 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~~~l  413 (413)
T cd00610         344 G-RGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL  413 (413)
T ss_pred             c-CceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence            3 3677787776431       13566777775 7899999875    6789999887 79999999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.98  E-value=2.3e-29  Score=235.51  Aligned_cols=322  Identities=17%  Similarity=0.157  Sum_probs=223.9

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCC---CCCC----CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC
Q 015768           40 VYWQPPKMAMEKVKELVWDPSIS---KYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA  112 (400)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~  112 (400)
                      ++-+..+++++++.++.......   ....    .+...++++.+++++    |+  +++++++|+++++..++.++.++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~--~~i~~~~g~t~al~~~l~~~~~~   82 (361)
T cd06452           9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----GM--DEARVTPGAREGKFAVMHSLCEK   82 (361)
T ss_pred             cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence            34456789999999888432111   1111    122345555555554    76  78999999999999999999999


Q ss_pred             CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCC-CCCCHHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHH
Q 015768          113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       113 gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~e~l~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      ||+|+++.++|++....++..|++++.+ +.+.++ +.+|++.+++.+++.     ..+++|++++|+||+|.+.+   +
T Consensus        83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~  158 (361)
T cd06452          83 GDWVVVDGLAHYTSYVAAERAGLNVREV-PNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---A  158 (361)
T ss_pred             CCEEEEcCCcchHHHHHHHhcCCEEEEE-ecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---H
Confidence            9999999999999888889999999999 877653 678999999988631     23599999999999999988   8


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP-  265 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-  265 (400)
                      ++|.++|+++|+++|+|++|+...   .+......+.+++++|+||+++ ++.|+||++.+   +++++++......+. 
T Consensus       159 ~~i~~~~~~~~~~vivD~a~~~g~---~~~~~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~---~~~~~~l~~~~~~~~~  231 (361)
T cd06452         159 KKIAKVCHEYGVPLLLNGAYTVGR---MPVSGKELGADFIVGSGHKSMA-ASAPIGVLATT---EEWADIVFRTSQMFKI  231 (361)
T ss_pred             HHHHHHHHHcCCeEEEECCcccCC---cCCCHHHcCCCEEEecCCcccc-CCCCeEEEEEC---HHHHHHHhcccccccc
Confidence            899999999999999999998432   1222333456799999999997 56699999998   788888765443211 


Q ss_pred             -------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--CCCceEEEeeCCCC-------
Q 015768          266 -------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLPEK-------  329 (400)
Q Consensus       266 -------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~~-------  329 (400)
                             .+.+.....++..++....++. +...+..++++++++.|++++++++..  +...+++.++.+..       
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~  310 (361)
T cd06452         232 KEVELLGCTLRGAPLVTLMASFPHVKERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKH  310 (361)
T ss_pred             ceeeeeccccCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhc
Confidence                   1111122333333443212223 233333445688999999985555542  23356776776521       


Q ss_pred             CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ..++.++..+|. ++||.+..   .+...++|++....++++++.+++.|+++.
T Consensus       311 ~~~~~~~~~~L~-~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         311 KRRGYFLYSELK-KRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             cccchhHHHHHH-HcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            112346888885 67999532   234568999973358999999999887653

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.98  E-value=1.1e-29  Score=239.77  Aligned_cols=332  Identities=15%  Similarity=0.167  Sum_probs=237.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.+++|..+.  +.++ .+|.+.+++.+.+.+.....   .....+...++++.+.+.+|.  +++++++|+++++.
T Consensus        24 ~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~g~--~~~~~~~sg~~a~~   98 (379)
T TIGR00707        24 VNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVS---NLYYTEPQEELAEKLVEHSGA--DRVFFCNSGAEANE   98 (379)
T ss_pred             CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc---cccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHH
Confidence            5678899999873  4554 56899999999887642111   111234566777777777775  49999999999999


Q ss_pred             HHHHHhc---C----CCCEEEEeCCCccchhHHHHhcCcEEEE----eccCCCC-CCC--CCHHHHHHhhccCCCCeEEE
Q 015768          104 NIVLTLC---D----AGDSVVMFAPYYFNSYMSFQMTGVTHIL----VGPCSSK-TLH--PDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus       104 ~~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~~g~~~~~----~~~~~~~-~~~--~~~e~l~~~l~~~~~~~~v~  169 (400)
                      .+++++.   .    +||+|++++|+|+++...+...+.....    . +...+ .+.  .|++.+++.+.+++  ++|+
T Consensus        99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~~~~~~--~~v~  175 (379)
T TIGR00707        99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFE-PLVPGFSYAPYNDIESLKKAIDDET--AAVI  175 (379)
T ss_pred             HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCC-CCCCCceeeCCCCHHHHHHHhhhCe--eEEE
Confidence            9998763   2    3799999999999887666555443211    1 22221 111  17899999887654  8998


Q ss_pred             EeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEc
Q 015768          170 VVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       170 l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      +++++|++|.. ++.+++++|.++|+++|+++|+||+|.++...+....  ......++  .++||.++ +|+|+||++.
T Consensus       176 ~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~--~t~sK~~~-~G~riG~~~~  252 (379)
T TIGR00707       176 VEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDI--ITLAKGLG-GGVPIGATLA  252 (379)
T ss_pred             EEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCE--EEEccccc-CCcccEEEEE
Confidence            87667788864 7899999999999999999999999987755442211  11111223  36899998 9999999999


Q ss_pred             cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC---CcccCCCCceEEE
Q 015768          247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLW  323 (400)
Q Consensus       247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~  323 (400)
                      +   +++++.+.......+++.+++.+.++.++|+...  ..++.++++++++.+++.|+++..   .....+ .++++|
T Consensus       253 ~---~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~  326 (379)
T TIGR00707       253 K---EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE--KERLLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLG  326 (379)
T ss_pred             c---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEE
Confidence            8   7888888765555677789999999998887421  134556677777777777765422   111222 478888


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +.++.   +..++.+.|. ++||.+.|+.    .+++|++++. .+++++++++++|++++
T Consensus       327 ~~~~~---~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       327 IELEA---PCKDIVKKAL-EKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             EEecC---cHHHHHHHHH-HCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence            88864   3567787765 8999999853    5899999876 79999999999998763

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.97  E-value=1.2e-29  Score=239.10  Aligned_cols=333  Identities=15%  Similarity=0.113  Sum_probs=232.1

Q ss_pred             EcCCCCCCCCCcHHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHH
Q 015768           34 SLAQGVVYWQPPKMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        34 ~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~  108 (400)
                      .|+.+.+++++|+.+++++.+.+....    ...|..........+.+.+.+++.+|.+ .++|++++|+|++++.++.+
T Consensus         2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~   81 (376)
T TIGR01977         2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG   81 (376)
T ss_pred             CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence            466676777788999999988876532    1123211111233334444444444765 45899999999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          109 LCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      +.++||+|++..++|+++...    .+..|.+++.+ +.+++ +.+|++++++.+++++  +++++++|+||||.++|  
T Consensus        82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~--~~v~~~~~~n~tG~~~~--  155 (376)
T TIGR01977        82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIV-KCDNE-GLISPERIKRAIKTNT--KLIVVSHASNVTGTILP--  155 (376)
T ss_pred             ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHhcCCCC--eEEEEECCCCCccccCC--
Confidence            999999999999999886543    34559999988 77654 4679999999997655  99999999999999999  


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh----
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----  260 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~----  260 (400)
                       +++|.++|+++|+++|+|++++.+..   +......+.++++.|++|+++.| ...|.++.++.  ..++.+...    
T Consensus       156 -~~~i~~l~~~~~~~livD~a~~~g~~---~~~~~~~~~D~~~~s~~K~l~~p-~g~g~l~~~~~--~~~~~~~~~~~~~  228 (376)
T TIGR01977       156 -IEEIGELAQENGIFFILDAAQTAGVI---PIDMTELAIDMLAFTGHKGLLGP-QGTGGLYIREG--IKLKPLKSGGTGS  228 (376)
T ss_pred             -HHHHHHHHHHcCCEEEEEhhhccCcc---CCCchhcCCCEEEecccccccCC-CCceEEEEcCC--cCcCceecCCCcc
Confidence             78889999999999999999985432   22223356789999999998533 23566554532  111111100    


Q ss_pred             ------------hccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEE
Q 015768          261 ------------QDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLW  323 (400)
Q Consensus       261 ------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~  323 (400)
                                  .+....+++.....++..+++.-. ...+.+.+++..+.+++++.|++.+++++..+.    ....++
T Consensus       229 ~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~  308 (376)
T TIGR01977       229 HSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVS  308 (376)
T ss_pred             ccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEE
Confidence                        001122455555566555665311 224567778888999999999887765555431    245666


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----------CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------CRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      +.++.  .+..++..+|.+++||.+..|..|.          ..+.+|++++. +|++|++.++++|++
T Consensus       309 ~~~~~--~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       309 FTVEG--IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             EEECC--CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            67653  3677888888644599999887653          35789999988 999999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.97  E-value=8.1e-29  Score=235.17  Aligned_cols=336  Identities=14%  Similarity=0.092  Sum_probs=238.0

Q ss_pred             CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCC--CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISK--YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++++++|++++ ..+..+|+|++++.+++.+...+.  .....+.....+.+++.+++..|.  +..++++++++|+..+
T Consensus        44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~An~~a  121 (406)
T PRK13393         44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVSNWAA  121 (406)
T ss_pred             CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHH
Confidence            46789998875 777789999999999987642211  111123334455555666555563  5666666677899999


Q ss_pred             HHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015768          106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       106 ~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~  181 (400)
                      +..+..  +||.|+.....|.+....++..|.+++.+ +.      .|++.+++.++.  ...+++|++++++|++|.+.
T Consensus       122 i~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~  194 (406)
T PRK13393        122 LSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIF-RH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA  194 (406)
T ss_pred             HHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEe-CC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence            998765  78888887888888888888888887777 53      266777777652  12358899999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cc---cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~---~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      |   +++|.++|++||+++|+||+|+.+.++..  ..   .......+++++|+||++|++|   ||++++   +++++.
T Consensus       195 ~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~---~~~~~~  265 (406)
T PRK13393        195 P---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS---AALCDF  265 (406)
T ss_pred             C---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC---HHHHHH
Confidence            9   89999999999999999999985444321  11   1112234788899999998777   999887   788887


Q ss_pred             HHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768          257 LLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       257 l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      +......  .+.+.+++.+.++.++|+...+. ...+.+++++.+++++.|++++. .+..+. +.++.+.++.. .+..
T Consensus       266 l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~v~~~~~-~~~~  341 (406)
T PRK13393        266 IRSFASGFIFTTSLPPAVAAGALASVRHLKAS-SAERERHQDRVARLRARLDKAGI-PHLPNP-SHIVPVMVGDP-VLCK  341 (406)
T ss_pred             HHHhCcCceecCccCHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCeEEEEeCCH-HHHH
Confidence            7765443  24456777777777777742222 23345667888899999988754 445555 44555555421 1346


Q ss_pred             HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++..+|++++||.+.++.++.   +.+++||+++. ++++|+++++++|++++.++
T Consensus       342 ~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        342 QISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             HHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence            788878755799998865443   23689999987 89999999999999998765

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=1.7e-29  Score=237.81  Aligned_cols=319  Identities=19%  Similarity=0.151  Sum_probs=227.6

Q ss_pred             CCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcC---CCC
Q 015768           43 QPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCD---AGD  114 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~---~gd  114 (400)
                      ++|+.+++++.+.+......    .+..........+++.+.+++.+|.+ ++++++++|+|++++.++.++..   +||
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~   89 (373)
T cd06453          10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGD   89 (373)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCC
Confidence            35688999988887542211    11111122333344445555555877 78999999999999999999987   899


Q ss_pred             EEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          115 SVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       115 ~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      +|++++++|++..    ...+..|++++.+ +.+.+ +.+|++++++.+.+++  ++|++++++||||.+.|   +++|.
T Consensus        90 ~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~--~~v~~~~~~~~tG~~~~---~~~i~  162 (373)
T cd06453          90 EIVTSVMEHHSNIVPWQQLAERTGAKLKVV-PVDDD-GQLDLEALEKLLTERT--KLVAVTHVSNVLGTINP---VKEIG  162 (373)
T ss_pred             EEEECcchhHHHHHHHHHHHhhcCcEEEEe-ecCCC-CCcCHHHHHHHhcCCc--eEEEEeCcccccCCcCC---HHHHH
Confidence            9999999998853    3345679999999 87744 4689999999998754  99999999999999999   88999


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-------
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-------  263 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~-------  263 (400)
                      ++|++||+++++|++++.+..   +......+.+++++|++|+++.  .++|+++.+   +++++++......       
T Consensus       163 ~~~~~~~~~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~~~--~g~g~~~~~---~~~~~~~~~~~~g~~~~~~~  234 (373)
T cd06453         163 EIAHEAGVPVLVDGAQSAGHM---PVDVQDLGCDFLAFSGHKMLGP--TGIGVLYGK---EELLEEMPPYGGGGEMIEEV  234 (373)
T ss_pred             HHHHHcCCEEEEEhhhhcCce---eeeccccCCCEEEeccccccCC--CCcEEEEEc---hHHhhcCCCeecCCCccccc
Confidence            999999999999999874332   1222233566888899999973  568999888   6776666543211       


Q ss_pred             --------------CCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC--CceEEEeeC
Q 015768          264 --------------IPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARL  326 (400)
Q Consensus       264 --------------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~  326 (400)
                                    ...+++.....++..+++.. ....+++.++..++++++.+.|++++++.+..+.  .+.++++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  314 (373)
T cd06453         235 SFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNL  314 (373)
T ss_pred             cccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEE
Confidence                          01234444444444444421 1224677788888899999999988765554321  245667777


Q ss_pred             CCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          327 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      +.  .+..++.++|. ++||.+.+|..|.        .++++|++++. +|++|++++++.|
T Consensus       315 ~~--~~~~~i~~~l~-~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         315 EG--IHPHDVATILD-QYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             CC--cCHHHHHHHHH-HCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence            54  35678888775 7999998877542        36799999997 8999999988764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.97  E-value=9e-29  Score=231.55  Aligned_cols=318  Identities=16%  Similarity=0.161  Sum_probs=228.9

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFA  120 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~  120 (400)
                      .+++.+++++......     +  .....+..+.+.+.+++.+|++++  .+++++|+|+++..++.++.++||++++..
T Consensus         9 ~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~   81 (355)
T TIGR03301         9 STSATVRDAMLVDWCH-----W--DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLI   81 (355)
T ss_pred             CCCHHHHHHhhhhccC-----C--CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEEC
Confidence            3567777777663221     1  112235556666666666688754  678899999999999999998888877776


Q ss_pred             CCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768          121 PYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS  198 (400)
Q Consensus       121 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~  198 (400)
                      +.+++.  ...++..|.+++.+ +.+++ +.+|++++++.++.++..+++++++++|++|...|   +++|.++|++||+
T Consensus        82 ~~~~~~~~~~~a~~~g~~~~~i-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~  156 (355)
T TIGR03301        82 NGAYGERLAKICEYLGIPHTDL-NFSEY-EPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHGA  156 (355)
T ss_pred             CCchhhHHHHHHHHcCCceEEE-ecCCC-CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcCC
Confidence            666553  45677889999988 77543 46799999999976554578888899999999999   8999999999999


Q ss_pred             EEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-----------------
Q 015768          199 WLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-----------------  261 (400)
Q Consensus       199 ~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-----------------  261 (400)
                      ++|+|++++.+   ..+......+.+++++|++|+++ ++.++||++.+   +++++.+....                 
T Consensus       157 ~livD~~~s~g---~~~~~~~~~~~d~~~~s~~K~l~-~~~G~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (355)
T TIGR03301       157 VLIVDAMSSFG---AIPIDIEELDVDALIASANKCLE-GVPGFGFVIAR---RDLLEASAGNARSLYLDLYDQWAYMEKT  229 (355)
T ss_pred             EEEEEeccccC---CcccchhhcCccEEEecCCcccc-cCCceeEEEEC---HHHHHHhhCCCCCceeeHHHHHHHhhhc
Confidence            99999987743   22333334467789999999974 23347999998   67777665210                 


Q ss_pred             ccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCCC-CCHHH
Q 015768          262 DNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKH-LDDFE  335 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~  335 (400)
                      ....++++.+.+.++..+++...  ...++..++++++++++++.|++++. .+..+   .++.++++.++... .+..+
T Consensus       230 ~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (355)
T TIGR03301       230 GKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGF-QPLLPERWQSPIIVSFLYPDDPDFDFDD  308 (355)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCC-eeecCCCCCCCcEEEEECCCCCcchHHH
Confidence            11345677777777666665321  22567778889999999999988765 43322   23456788887521 24567


Q ss_pred             HHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      +..+|. ++||.+.+|..+.. +++||++.. ++.++++.+++.|+++
T Consensus       309 ~~~~l~-~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~  354 (355)
T TIGR03301       309 FYQELK-ERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA  354 (355)
T ss_pred             HHHHHH-HCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            777775 78999999875543 799999855 7999999999999875

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.97  E-value=1.1e-28  Score=234.35  Aligned_cols=329  Identities=16%  Similarity=0.118  Sum_probs=233.6

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC-----CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH-HHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ-AFV  103 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~-a~~  103 (400)
                      ..++.++.+.+++++|+.+.++..+. . . ...|.+     ..|..++++++++++++.+|.+.++++++++++. +..
T Consensus        20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~   96 (398)
T cd00613          20 QSMSFLGSGTYKHNPPAVIKRNILEN-E-F-YTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEA   96 (398)
T ss_pred             cCcccccccccCCcCcHHHHHHhccc-c-C-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHH
Confidence            44589999999998777777766665 2 1 234444     6788999999999999999987777877775554 444


Q ss_pred             HHHHHhcCC--CCEEEEeCCCccchhHHHHhcC----cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768          104 NIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTG----VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (400)
Q Consensus       104 ~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt  177 (400)
                      .++.++..+  ||+|+++++.|+++...++..|    ++++.+ |.+++ +.+|++.+++.+.+++  ++|++++|+ ++
T Consensus        97 ~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~t--~~viv~~~~-~~  171 (398)
T cd00613          97 AGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEV-PSDEG-GTVDLEALKEEVSEEV--AALMVQYPN-TL  171 (398)
T ss_pred             HHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEe-ccCCC-CCcCHHHHHHhcCCCe--EEEEEECCC-CC
Confidence            455555565  9999999999999988887777    888888 77654 3679999999997665  999999885 89


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC----cceeEEEEccCCcHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRVGYIAYPSEVEGF  253 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~~~G~i~~~~~~~~~  253 (400)
                      |.+.+  .+++|.++|++||+++|+|+++..+..   .......+.+++++|+||++ ++    |+++|+++.+   +++
T Consensus       172 G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~---~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~---~~~  242 (398)
T cd00613         172 GVFED--LIKEIADIAHSAGALVYVDGDNLNLTG---LKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK---KEL  242 (398)
T ss_pred             ceecc--hHHHHHHHHHhcCCEEEEEeccccccC---CCChHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh---hhh
Confidence            99964  369999999999999999998764331   11112335789999999998 44    7889999988   566


Q ss_pred             HHHHHHh-----------------------------hccCCcCccHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHH
Q 015768          254 ATQLLKV-----------------------------QDNIPICASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       254 ~~~l~~~-----------------------------~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~  303 (400)
                      .+.+...                             .....++.+.....++...+. ...+.++++.++++++++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~  322 (398)
T cd00613         243 VRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAK  322 (398)
T ss_pred             HhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence            5553110                             001112223333333333333 3345677888999999999999


Q ss_pred             HhccCCCCcccCCCCc--eEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          304 ALSPLGEGAVKGGEGA--IYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       304 ~L~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      .|++++....  +.+.  ..++++++.. ..+..+++..|. ++||.+.... ...++.+|++++. +|++|++++++.|
T Consensus       323 ~L~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~L~-~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~L  398 (398)
T cd00613         323 RLKEVGGVLP--FNGPFFHEFVLRLPPLYGIRAEDLAKALI-DGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             HHHhcCCccc--CCCCeeEEEEEEcCCcchHHHHHHHHhhh-hcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence            9998876331  2222  2356677642 124677888876 7899875422 1245789999988 9999999998764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.97  E-value=2.7e-28  Score=229.13  Aligned_cols=321  Identities=16%  Similarity=0.159  Sum_probs=230.1

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVMFA  120 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~--~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~  120 (400)
                      ++++.+++++.... .    .+.  ....+..+.+.+.+++..|.++  +.+++++|+|++++.++.++..+||.|++..
T Consensus        15 ~~~~~~~~a~~~~~-~----~~~--~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~   87 (368)
T PRK13479         15 TTSRTVREAMLRDW-G----SWD--DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD   87 (368)
T ss_pred             CCCHHHHHHhCCCC-C----CCC--hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence            34566666655443 1    111  1133455566666666667754  5688999999999999999999999999998


Q ss_pred             CCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768          121 PYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS  198 (400)
Q Consensus       121 p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~  198 (400)
                      ++|++..  ..++..|++++.+ |.+++ ..+|++++++.++.++..+++++++++||||...|   +++|.++|+++|+
T Consensus        88 ~~~~~~~~~~~~~~~g~~~~~i-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~  162 (368)
T PRK13479         88 NGAYGARIAQIAEYLGIAHVVL-DTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHGK  162 (368)
T ss_pred             CCchHHHHHHHHHHcCCcEEEE-ECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcCC
Confidence            8887764  6778899999999 87644 36799999999875554578999999999999999   8899999999999


Q ss_pred             EEEEcccccccccCCCCccccCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHHhh----------------
Q 015768          199 WLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ----------------  261 (400)
Q Consensus       199 ~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~~~----------------  261 (400)
                      ++|+|+++..   +..+......+.+++++|++|++ |.+|  +||++.+   +++++.+....                
T Consensus       163 ~livDa~~~~---g~~~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (368)
T PRK13479        163 RLIVDAMSSF---GAIPIDIAELGIDALISSANKCIEGVPG--FGFVIAR---RSELEACKGNSRSLSLDLYDQWAYMEK  234 (368)
T ss_pred             EEEEEccccc---CCccccccccCceEEEecCccccccCCC--ceEEEEC---HHHHHHhhcCCCCeeecHHHHHhhhcc
Confidence            9999977653   23233333345678889999987 4455  6999998   67766655421                


Q ss_pred             -ccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCC-CCCHH
Q 015768          262 -DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEK-HLDDF  334 (400)
Q Consensus       262 -~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~  334 (400)
                       ....++++.+.+.++..+++..  ..+.++..+++.++++++++.|++++. .+..+   .......+.++.. ..+..
T Consensus       235 ~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (368)
T PRK13479        235 TGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGF-EPLLDAEIQSPIIVTFHAPADPAYDFK  313 (368)
T ss_pred             cCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC-cccCCchhcCceEEEEECCCCCCcCHH
Confidence             1122466766666666666531  223567778899999999999998865 33322   1122233344432 13567


Q ss_pred             HHHHHHHHhcCeEEeCCCccCCCCeEEEEe-ccCCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACGCRGHLRISF-GGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++..+|. ++||.+.+|..+ ..+++|++. +.++++|++.+++.|++++.++
T Consensus       314 ~l~~~L~-~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~  364 (368)
T PRK13479        314 EFYERLK-EQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM  364 (368)
T ss_pred             HHHHHHH-HCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence            8888875 789999987643 356899986 5589999999999999998764

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.97  E-value=2.6e-28  Score=229.94  Aligned_cols=334  Identities=16%  Similarity=0.131  Sum_probs=230.6

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC---CCCC----CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS---KYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      ++|+++.-.-.-++++++++++.++.......   .+..    .....++++.+++++    |.  +++++++|+++++.
T Consensus        19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g~--~~~~~~~g~t~a~~   92 (387)
T PRK09331         19 EFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----GM--DEARVTHGAREGKF   92 (387)
T ss_pred             cccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHH
Confidence            45666554433457889999999888542110   1111    223455666666655    65  46888999999999


Q ss_pred             HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccC-----CCCeEEEEeCCCCCC
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPS  177 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~-----~~~~~v~l~~p~npt  177 (400)
                      .++.++.++||+|+++.++|++....++..|++++.+ |.+ ++++.+|++.+++.++..     +.+++|++++|+|++
T Consensus        93 ~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~t  171 (387)
T PRK09331         93 AVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREV-PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNY  171 (387)
T ss_pred             HHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCC
Confidence            9999999999999999999999988889999999999 773 234568999999988642     246999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      |.+.+   +++|.++|+++|+++++|++|+....   +......+.+++++|+||+++ ++.++||++++   +++++++
T Consensus       172 G~~~~---l~~I~~la~~~g~~livD~a~~~g~~---~~~~~~~g~D~~~~s~~K~l~-~~~~~G~l~~~---~~~i~~~  241 (387)
T PRK09331        172 GNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRM---PVDGKKLGADFIVGSGHKSMA-ASAPSGVLATT---EEYADKV  241 (387)
T ss_pred             ccccc---HHHHHHHHHHcCCEEEEECCcccCCc---CCCHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhc
Confidence            99999   99999999999999999999984321   222233467799999999997 55689999988   6777776


Q ss_pred             HHhhccC--------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--CCCceEEEeeCC
Q 015768          258 LKVQDNI--------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLP  327 (400)
Q Consensus       258 ~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~  327 (400)
                      ......+        ..+.+.....++..+++...+. .+..++..++++++++.|++++++++..  +....++.+..+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~  320 (387)
T PRK09331        242 FRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETP  320 (387)
T ss_pred             ccccCCCcccceeeeceecCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCC
Confidence            5432111        1112222223333333321122 2345556778889999999995556553  223455555655


Q ss_pred             CC-------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          328 EK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       328 ~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..       ..+..++...|. ++||...+.   +....+|++....++++++.+++.|+++++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~  382 (387)
T PRK09331        321 SFDEIAKKHKRRGFFLYEELK-KRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIAEKY  382 (387)
T ss_pred             chhHHhhhccccchhHHHHHH-HcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence            11       112356788775 789984332   23456777653368999999999999887763

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.97  E-value=6e-28  Score=227.29  Aligned_cols=346  Identities=16%  Similarity=0.108  Sum_probs=244.6

Q ss_pred             hHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768           17 PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA   96 (400)
Q Consensus        17 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~   96 (400)
                      ..+..+.++.+++.++-.+ -++..-+++|.+++++.+.+...... .....+...+.+.+++.+++.+|.+++++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~   83 (371)
T PRK13520          6 EILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNLGD-PGLFPGTAKLEEEAVEMLGELLHLPDAYGYITS   83 (371)
T ss_pred             HHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCCCC-cccCccHHHHHHHHHHHHHHHhCCCCCCeEEec
Confidence            3444555555554443222 22223346788889988887653211 111234566667888888888898877889999


Q ss_pred             ChHHHHHHHHHHhcC----CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768           97 GANQAFVNIVLTLCD----AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN  172 (400)
Q Consensus        97 g~t~a~~~~~~~l~~----~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~  172 (400)
                      |+++++..++.++.+    +|++|++.+++|+++...++..|++++.+ |.+++ +.+|++.+++.+++++  ++|++++
T Consensus        84 ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~vi~~~  159 (371)
T PRK13520         84 GGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRA-PLDDD-YRVDVKAVEDLIDDNT--IGIVGIA  159 (371)
T ss_pred             CcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEe-cCCCC-CcCCHHHHHHHHhhCC--EEEEEEc
Confidence            999999999887753    57899999999999999888899999999 87654 4679999999998665  7777788


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCC--ccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~--~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      ++|++|.+.|   +++|.++|+++|+++++|++|+.+...  ...  ......+.+.+..|.+|+. .+|.++|+++..+
T Consensus       160 ~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~-~a~~~~G~~~~~~  235 (371)
T PRK13520        160 GTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMG-LAPIPAGGILFRD  235 (371)
T ss_pred             CCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcccc-CccCCceEEEEcC
Confidence            8999999999   899999999999999999999866421  111  1111234566777889965 4677888877654


Q ss_pred             CcHHHHHHHHHhhccC--------CcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCC
Q 015768          249 EVEGFATQLLKVQDNI--------PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEG  318 (400)
Q Consensus       249 ~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~  318 (400)
                        +++.+.+.......        ..+.+.....++..+++. ..+..++..++..++++++.+.|++++. . +..+. 
T Consensus       236 --~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~-  311 (371)
T PRK13520        236 --ESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGF-EPVIEPV-  311 (371)
T ss_pred             --HHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCC-EEecCCC-
Confidence              56666654211100        112233445555555553 2344577888999999999999998854 5 44444 


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      ..++.++++    +.+++..+|. ++||.+.++.   .++++|++++. ++++|++.+++.|+++++
T Consensus       312 ~~~v~~~~~----~~~~v~~~L~-~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        312 LNIVAFDDP----NPDEVREKLR-ERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             ceEEEEecC----CHHHHHHHHH-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence            567777776    4678888775 6799997643   45789999876 799999999999998764

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.97  E-value=1.7e-28  Score=232.66  Aligned_cols=336  Identities=14%  Similarity=0.127  Sum_probs=234.9

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC--CCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG--ADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .+.|+.+... +.|+.|++++.+.+.........  ...+  ..+..+.+.+.+++.+|+++++|++++|+|++++.++.
T Consensus         4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~   82 (402)
T TIGR02006         4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIK   82 (402)
T ss_pred             cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHH
Confidence            3666666543 56789999998877532211110  0001  12334444555555568888999999999999999987


Q ss_pred             Hhc----CCCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768          108 TLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       108 ~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~  180 (400)
                      ++.    ++||+|+++.++|+++...+   +..|++++.+ |.++++ .+|++.+++.+++++  +++++++++||||.+
T Consensus        83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~~-~~d~~~l~~~l~~~~--~lv~v~~~~n~tG~~  158 (402)
T TIGR02006        83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYL-PPKSNG-LIDLEELKAAIRDDT--ILVSIMHVNNEIGVI  158 (402)
T ss_pred             HHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEE-ccCCCC-cCCHHHHHHhcCCCC--EEEEEECCCcCceec
Confidence            763    68999999999998876554   4569999999 877554 689999999998665  999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      .|   +++|.++|+++|+++++|++++...   .+......+.++++.|++|.+|.+|  +|+++.+++   ...++...
T Consensus       159 ~~---~~~I~~l~~~~g~~livD~a~a~g~---~~~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~---~~~~~~~~  227 (402)
T TIGR02006       159 QD---IAAIGEICRERKVFFHVDAAQSVGK---IPINVNELKVDLMSISGHKIYGPKG--IGALYVRRK---PRVRLEAL  227 (402)
T ss_pred             cc---HHHHHHHHHHcCCEEEEEcchhcCC---cccCccccCCCEEEEehhhhcCCCc--eEEEEEccC---CCCCCCce
Confidence            99   8899999999999999999997432   2222334567799999999876445  788776632   11111111


Q ss_pred             -------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCCCC
Q 015768          261 -------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKH  330 (400)
Q Consensus       261 -------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~  330 (400)
                             +.....+++.....++..+++...++++...++++++++++++.|++++.+.+.++.   ......+.++.  
T Consensus       228 ~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~--  305 (402)
T TIGR02006       228 IHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY--  305 (402)
T ss_pred             ecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC--
Confidence                   111234567777777767776433456777888999999999999887764444221   11111233332  


Q ss_pred             CCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          331 LDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       331 ~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .+.+++...+   .++.+..|..|..                   .+.+|+|++. +|++|++.+++.|+++++.+..
T Consensus       306 ~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~  380 (402)
T TIGR02006       306 VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE  380 (402)
T ss_pred             cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            2355555433   5898888877642                   3689999998 9999999999999999987643

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.97  E-value=1.3e-27  Score=225.04  Aligned_cols=343  Identities=15%  Similarity=0.137  Sum_probs=239.1

Q ss_pred             chHHHHHHHHHhcCCCeEEcCCCC----CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc
Q 015768           16 MPIMVQIQELVRGAKNAVSLAQGV----VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS   91 (400)
Q Consensus        16 ~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~   91 (400)
                      ..+..++..++++.-+.   +++.    ....+.+.+++++........ ..-+...+...+.+.+.+.+++.+|+++++
T Consensus         3 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~~~   78 (373)
T TIGR03812         3 EEVLEELKEYRSEDLKY---SDGRILGSMCTNPHPIAVKAYDMFIETNL-GDPGLFPGTKKIEEEVVGSLGNLLHLPDAY   78 (373)
T ss_pred             HHHHHHHHHHHhcCCCC---CCCcEEEEEeCCchHHHHHHHHHHhhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCC
Confidence            34566777777664333   1111    111245566777777654321 111112345677778888888888998888


Q ss_pred             EEEeCChHHHHHHHHHHhc------CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768           92 VMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (400)
Q Consensus        92 i~~~~g~t~a~~~~~~~l~------~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~  165 (400)
                      +++++|+++++..++.++.      ++||+|++++++|+++...++..|++++.+ +.+++ +.+|++++++.+.+++  
T Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v-~~~~~-~~~d~~~l~~~l~~~~--  154 (373)
T TIGR03812        79 GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYA-PLDED-YTVDVKDVEDLIDDNT--  154 (373)
T ss_pred             eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEE-eeCCC-CCcCHHHHHHHHhhCc--
Confidence            8999999999988877664      467999999999999999999999999999 87654 5789999999997665  


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC----CC---CccccCCCcEEEEeccccccCCCc
Q 015768          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD----GR---KHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~----~~---~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      ..+++.+|+||||.+.+   +++|.++|+++|+++++|++|+.+...    +.   .......+.+.+..|.+|+ +.++
T Consensus       155 ~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~-~~~~  230 (373)
T TIGR03812       155 IGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKM-GLSP  230 (373)
T ss_pred             EEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECcccc-CCCc
Confidence            44444458999999999   888999999999999999999865421    00   1111112445667788994 4566


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccC--------CcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNI--------PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      .++|+++..+  +++++.+.......        ..+.+.....++..+++. ..+.+++..+++.++++++++.|++++
T Consensus       231 ~~~G~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g  308 (373)
T TIGR03812       231 IPAGGILFRS--KSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIG  308 (373)
T ss_pred             CCceEEEEeC--HHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            7787665443  56666653211110        013344556666666664 235567888999999999999999987


Q ss_pred             CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      ...+..+. .+++.++++.    ..++..+|. ++||.+.++.   .++++|++++. ++++|++.+++.|++
T Consensus       309 ~~~~~~~~-~~~v~~~~~~----~~~v~~~L~-~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~  372 (373)
T TIGR03812       309 FEPVIEPV-LNIVAFEVDD----PEEVRKKLR-DRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE  372 (373)
T ss_pred             CeEEcCCC-ceEEEEEeCC----HHHHHHHHH-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence            64444444 6677777763    457887775 7899997653   46799999887 799999999998875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.97  E-value=1.4e-28  Score=214.78  Aligned_cols=339  Identities=22%  Similarity=0.354  Sum_probs=257.7

Q ss_pred             CcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhc-CCCCEEEE
Q 015768           44 PPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVM  118 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv  118 (400)
                      .|..++++..+.+..  +..+.|+.+.|.+-+|+.+|+++.++.|.  +|++|++|+|++.|+..++..++ .+.+.|++
T Consensus        87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~Gvli  166 (475)
T KOG0258|consen   87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLI  166 (475)
T ss_pred             CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEe
Confidence            456777777776654  35778999999999999999999999986  47999999999999999999986 56799999


Q ss_pred             eCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768          119 FAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK  194 (400)
Q Consensus       119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~  194 (400)
                      +-|-|+-+...+...|...+.+ .+++ .+|.+|.++|++.+.   .+-.++++++.||.||||.+++.+.+++|..+|.
T Consensus       167 PiPQYPLYsAti~l~~~~~v~Y-yLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~  245 (475)
T KOG0258|consen  167 PIPQYPLYSATISLLGGTQVPY-YLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAA  245 (475)
T ss_pred             ecCCCchhHHHHHHhCCcccce-eeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHH
Confidence            9999999998888899888777 6665 479999999999886   3445799999999999999999999999999999


Q ss_pred             HcCCEEEEcccccccccCCC-Ccccc---------CC-C--cEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          195 AAGSWLVVDNTYEYFMYDGR-KHCCV---------EG-D--HVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       195 ~~~~~li~D~a~~~~~~~~~-~~~~~---------~~-~--~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      ++++.++.||+|....+... ++.+.         .. +  ..+...|.||.+ |=.|.|.||+-.-+-.++..+.+.+.
T Consensus       246 ~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl  325 (475)
T KOG0258|consen  246 EEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKL  325 (475)
T ss_pred             HcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHH
Confidence            99999999999998887653 33221         11 1  235567889998 33789999975554335555555443


Q ss_pred             hccCCcCccHHHHHHHHHHhcC---Cc-------HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC--C
Q 015768          261 QDNIPICASIISQHLALYSLQT---GP-------EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP--E  328 (400)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~l~~---~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~  328 (400)
                      .. ....++...|.........   ++       ...+...+.+++++..+.+.++++.++.+..++|+++.+.++.  .
T Consensus       326 ~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~  404 (475)
T KOG0258|consen  326 AS-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPP  404 (475)
T ss_pred             Hh-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCH
Confidence            32 2333444455544444432   11       2235566777888888999999999999999999999986653  2


Q ss_pred             CC--------CCHHH-HHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          329 KH--------LDDFE-VVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       329 ~~--------~~~~~-~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ..        ...+. .+..|++..||++.||+.|+.   .-|+|.++--  .. + ..+++++++-.++..
T Consensus       405 kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~~f~~  472 (475)
T KOG0258|consen  405 KAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHAEFMD  472 (475)
T ss_pred             HHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHHHHHH
Confidence            11        12222 456788999999999999984   3489998753  33 4 888888888887764

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.97  E-value=1.7e-28  Score=232.08  Aligned_cols=335  Identities=12%  Similarity=0.144  Sum_probs=233.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+.....  .. ...+....+++.+.+..+  .+.+++++++++|++
T Consensus        37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~--~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGseA~e  111 (396)
T PRK04073         37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS--RA-FHSDQLGPWYEKVAKLTG--KDMVLPMNTGAEAVE  111 (396)
T ss_pred             CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc--cc-cCCHHHHHHHHHHHhcCC--CCeEEEcCChHHHHH
Confidence            4578899998775  3343 78999999999887643211  11 122344556666665544  468999999999999


Q ss_pred             HHHHHhcC---------CC-CEEEEeCCCccchhH-HHHhcCcEEEE--eccCCCC----CCCCCHHHHHHhhccCCCCe
Q 015768          104 NIVLTLCD---------AG-DSVVMFAPYYFNSYM-SFQMTGVTHIL--VGPCSSK----TLHPDADWLEKTLETKPTPK  166 (400)
Q Consensus       104 ~~~~~l~~---------~g-d~vlv~~p~~~~~~~-~~~~~g~~~~~--~~~~~~~----~~~~~~e~l~~~l~~~~~~~  166 (400)
                      .+++.+..         +| ++|+....+|++... .+...+.....  ..|..++    .+ .|++.+++.+.+++  +
T Consensus       112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~~~--~  188 (396)
T PRK04073        112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITPNT--A  188 (396)
T ss_pred             HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhcccCe--E
Confidence            99998741         34 789999888887653 33322211000  0011000    11 17889998887554  8


Q ss_pred             EEEEeCCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768          167 LVSVVNPGNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       167 ~v~l~~p~nptG~~~~~-~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      +|++++++||+|.+++. +++++|.++|++||+++|+||+|.++...+........+....+.++||.+|.+|+|+||++
T Consensus       189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~  268 (396)
T PRK04073        189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVA  268 (396)
T ss_pred             EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEE
Confidence            88888889999998765 57999999999999999999999977654432211111111223467999997779999999


Q ss_pred             ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccCCCCceEEE
Q 015768          246 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGEGAIYLW  323 (400)
Q Consensus       246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~  323 (400)
                      ++   +++.+.+.......+++.+++.+.++.++|+...+  ....++..++.+++.+.|++++.  +....+. +.+++
T Consensus       269 ~~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~  342 (396)
T PRK04073        269 AN---RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE--EKLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIG  342 (396)
T ss_pred             Ec---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEE
Confidence            98   78888876655556788899999999999874211  23445566778888888887632  2333444 67788


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +.++.   +..++..+|+ ++||.+.+.    .++++||+++. .+++++++++++|++++
T Consensus       343 ~~~~~---~~~~~~~~l~-~~Gv~~~~~----~~~~iRi~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        343 VELNE---PARPYCEALK-EEGLLCKET----HETVIRFAPPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             EEecc---hHHHHHHHHH-HCCeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence            88763   4677888776 789999763    25799999765 79999999999999875

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.97  E-value=5.6e-29  Score=231.94  Aligned_cols=308  Identities=16%  Similarity=0.143  Sum_probs=228.0

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC----------
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD----------  111 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~----------  111 (400)
                      .++..+........++....|+...+..++++++++++++.+|.+  ..++++|+|+|+++..++.++..          
T Consensus        10 ~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~   89 (345)
T cd06450          10 DPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG   89 (345)
T ss_pred             cHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccc
Confidence            344444444444444335568888889999999999999999875  46899999999999999998752          


Q ss_pred             --C--CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCH
Q 015768          112 --A--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPE  183 (400)
Q Consensus       112 --~--gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~  183 (400)
                        +  ++.|+++.++|.++...++..|.+++.+ |.++++ .+|++++++.+.+    ...++++++++++||+|.+.+ 
T Consensus        90 ~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~-  166 (345)
T cd06450          90 GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLV-PVDEDG-RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP-  166 (345)
T ss_pred             ccccCCeEEEEcCcchhHHHHHHHHHhcCeEEe-eeCCCC-CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC-
Confidence              2  3478899999999988888889999999 887765 7899999999875    112488888999999999988 


Q ss_pred             HHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                        +++|.++|+++|+++++|++|+.+........   ....+.+.+..|+||+++ ++.++|++..+             
T Consensus       167 --~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~-------------  230 (345)
T cd06450         167 --LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR-------------  230 (345)
T ss_pred             --HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH-------------
Confidence              89999999999999999999987764321111   111245677889999875 56677776533             


Q ss_pred             hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---CCCHHHHH
Q 015768          261 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVV  337 (400)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  337 (400)
                               .+.++++...+.  .+.++++.++..++++++.+.|++++.+.+..+....++.+.++..   ..+..++.
T Consensus       231 ---------~~~~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~  299 (345)
T cd06450         231 ---------ALKLWATLRRFG--RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLS  299 (345)
T ss_pred             ---------HHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHH
Confidence                     444455555554  3456788888999999999999998765555433355666666542   12456788


Q ss_pred             HHHHHhcCeEEeCCCccCCCCeEEEEecc-C-CHHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACGCRGHLRISFGG-L-VEDDCKAAADRLRRG  382 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~-~~~~~~~~~~~l~~~  382 (400)
                      +.|. ++|+.+.++..+..+.++|++++. . +.+|++++++.|+++
T Consensus       300 ~~L~-~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~~  345 (345)
T cd06450         300 DRLN-ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIERA  345 (345)
T ss_pred             HHHH-hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence            7775 676666555544456799999986 4 999999999998763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.97  E-value=4.2e-28  Score=228.46  Aligned_cols=332  Identities=16%  Similarity=0.169  Sum_probs=235.4

Q ss_pred             hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||.++..  .++ .+|++++++.+.+++...  . ......+++.++++++.+..+  .+.+++++++++|++
T Consensus        26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~~--~~~~~~~~sG~~a~~  100 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH--V-SNLFTNSLQEEVASLLAENSA--GDLVFFCNSGAEANE  100 (377)
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc--c-ccccCCHHHHHHHHHHHhcCC--CCEEEEeCCcHHHHH
Confidence            56889999988862  333 789999999999876321  1 123346788999999976654  368999999999999


Q ss_pred             HHHHHhc-CCC-CEEEEeCCCccchhH-HHHhcCcEEE---EeccCCCCC-C--CCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768          104 NIVLTLC-DAG-DSVVMFAPYYFNSYM-SFQMTGVTHI---LVGPCSSKT-L--HPDADWLEKTLETKPTPKLVSVVNPG  174 (400)
Q Consensus       104 ~~~~~l~-~~g-d~vlv~~p~~~~~~~-~~~~~g~~~~---~~~~~~~~~-~--~~~~e~l~~~l~~~~~~~~v~l~~p~  174 (400)
                      .++.... -+| ++|++.+++|++... .+...+....   .. |..++- .  ..|++.+++.+.+++  ++|+++.++
T Consensus       101 ~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~~~~~~--~~ii~e~i~  177 (377)
T PRK02936        101 AALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFG-PLLPGFTHVPFNDIKALKEVMNEEV--AAVMLEVVQ  177 (377)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCC-CCCCCceEeCCCCHHHHHHhccCCe--EEEEEeccc
Confidence            9999653 234 679999999987553 3333332110   11 111110 0  116889999887554  899999889


Q ss_pred             CCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768          175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  251 (400)
Q Consensus       175 nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~  251 (400)
                      +++|.. .+.+++++|.++|++||+++|+||+|.++...+.....  .....+  +.++||.++ +|+|+||++.+   +
T Consensus       178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d--i~t~sK~l~-~G~~ig~v~~~---~  251 (377)
T PRK02936        178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD--IVTVAKGLG-NGIPVGAMIGK---K  251 (377)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc--EEEEccccc-CCCccEEEEEc---H
Confidence            998876 58899999999999999999999999877655432211  111122  347899998 89999999998   7


Q ss_pred             HHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCcccCCCCceEEEeeCC
Q 015768          252 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEGAIYLWARLP  327 (400)
Q Consensus       252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~  327 (400)
                      ++.+.+.......+++.+++.+.++.++|+...  ..+..++++++.+.+++.|++    ++.+....+. +.++|+.++
T Consensus       252 ~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~-g~~~~i~~~  328 (377)
T PRK02936        252 ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK--QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGK-GLMIGIECT  328 (377)
T ss_pred             HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeec-ceEEEEEec
Confidence            888887655555677889999999999997521  123445555666666666654    3332222343 788999987


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      .   +...+...+ .++||.+.|+.    .+++||+++. .+++++++++++|.+++
T Consensus       329 ~---~~~~~~~~l-~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        329 E---EVAPVIEQL-REEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             c---hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            4   255666655 58999998743    5799999754 79999999999998764

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.97  E-value=1.4e-27  Score=227.85  Aligned_cols=359  Identities=17%  Similarity=0.124  Sum_probs=236.8

Q ss_pred             HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHh
Q 015768           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQ   83 (400)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~   83 (400)
                      ++++.+.....-+.+.-...++.++|+.++++  +|+.|++++...+......+++      .......+.+...+.+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~   82 (416)
T PRK00011          5 NLAEYDPEIADAIEQELKRQEEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKE   82 (416)
T ss_pred             hhhhcCHHHHHHHHHHHHHHhcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHH
Confidence            44333333333334433334788999998877  5799999987765322111111      111122333334446777


Q ss_pred             hcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH-----HHHhcCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768           84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEKT  158 (400)
Q Consensus        84 ~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~  158 (400)
                      .+|.+...|++++ +|+++..++.++.+|||+|+++.|+|.++..     .+...|++++.+ +.+.+++.+|++++++.
T Consensus        83 ~~g~~~~~i~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~  160 (416)
T PRK00011         83 LFGAEYANVQPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSY-GVDEETGLIDYDEVEKL  160 (416)
T ss_pred             HhCCCceeeecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeec-CcCcccCCcCHHHHHHH
Confidence            7788776666655 5789999999999999999999999976432     123346788888 77755567899999999


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccCCC
Q 015768          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       159 l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~  237 (400)
                      ++... +++|++++++  +|...|   +++|.++|+++|+++|+|++|..... .+....... ..+++++|+||++  +
T Consensus       161 i~~~~-~k~v~~~~~~--~~~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l--~  231 (416)
T PRK00011        161 ALEHK-PKLIIAGASA--YSRPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTL--R  231 (416)
T ss_pred             HHhcC-CCEEEECCCc--CCCccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCC--C
Confidence            97422 4888887544  456667   89999999999999999999864322 221111122 4568899999987  5


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCc-cHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICA-SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      |.++||+++++  +++.+++.........+. ......++..++.. ..++++++.++++++++++++.|++.+. .+..
T Consensus       232 g~~gg~i~~~~--~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~  308 (416)
T PRK00011        232 GPRGGLILTND--EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF-RVVS  308 (416)
T ss_pred             CCCceEEEeCC--HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eeee
Confidence            78889999865  678888876654333322 22233332223321 2245678889999999999999998764 4432


Q ss_pred             -CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC-cc-----CCCCeEEEEec-----cCCHHHHHHHHHHHHHHH
Q 015768          316 -GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG-AC-----GCRGHLRISFG-----GLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       316 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~-~~-----~~~~~iRi~~~-----~~~~~~~~~~~~~l~~~l  383 (400)
                       ...++++|+.+++...+..++...| +++||.+..+. .+     ..+..+|++..     .++++|++..++.|++++
T Consensus       309 ~~~~~~~~~i~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~  387 (416)
T PRK00011        309 GGTDNHLVLVDLRSKGLTGKEAEAAL-EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL  387 (416)
T ss_pred             cCCCCeEEEEeCcccCCCHHHHHHHH-HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence             1225888998864333566777766 58999997432 11     13567999642     257899999999998887


Q ss_pred             HH
Q 015768          384 EE  385 (400)
Q Consensus       384 ~~  385 (400)
                      ..
T Consensus       388 ~~  389 (416)
T PRK00011        388 DN  389 (416)
T ss_pred             hc
Confidence            64

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.97  E-value=1.1e-27  Score=226.96  Aligned_cols=334  Identities=15%  Similarity=0.140  Sum_probs=234.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+...  ++.. ...+...++++.+.+..+  .+.++++++|++|+.
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e  111 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNV-FTNEPALRLAKKLIDATF--AERVFFANSGAEANE  111 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc--ccCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHH
Confidence            4578899998873  3443 789999999999876321  1111 112234466666665543  468999999999999


Q ss_pred             HHHHHhc--------CCCCEEEEeCCCccchhHHH-HhcCc------------EEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768          104 NIVLTLC--------DAGDSVVMFAPYYFNSYMSF-QMTGV------------THILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus       104 ~~~~~l~--------~~gd~vlv~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      .+++...        ...+.|+..+.+|++..... ...+.            .++.+ |      ..|++.+++.+.++
T Consensus       112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~d~~~l~~~l~~~  184 (403)
T PRK05093        112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHV-P------FNDLAAVKAVIDDH  184 (403)
T ss_pred             HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEe-C------CCCHHHHHHHhcCC
Confidence            9999763        12367888888888865432 21111            11222 1      12788999888654


Q ss_pred             CCCeEEEEeCCCCCCccC--CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcce
Q 015768          163 PTPKLVSVVNPGNPSGTY--IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~--~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~  240 (400)
                      +  ++|+++ |.||+|-+  .+.+++++|.++|++||+++|+||+|.++.+.+........+...-+.|+||.++ +|+|
T Consensus       185 ~--aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G~r  260 (403)
T PRK05093        185 T--CAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALG-GGFP  260 (403)
T ss_pred             e--EEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEeccccc-CCcc
Confidence            3  788777 66666654  4889999999999999999999999998766553221111111122568999998 8999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--Ccc-cCCC
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAV-KGGE  317 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~-~~~~  317 (400)
                      +||++.+   +++++.+.......+++.+++.+.++.++|+...  ..+..++++++.+.+.+.|++++.  ..+ ..+.
T Consensus       261 ig~vv~~---~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  335 (403)
T PRK05093        261 IGAMLTT---AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN--TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRG  335 (403)
T ss_pred             eEEEEEc---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEee
Confidence            9999999   7888887765555677889999999888776421  134567788888888888887632  111 2233


Q ss_pred             CceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       318 ~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+.++|+.++... .+..+++..++ ++||.+.++    +.+++|++++. .+++++++++++|.+++.++
T Consensus       336 ~G~~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~----g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~  401 (403)
T PRK05093        336 MGLLIGAELKPQYKGRARDFLNAAA-EEGVMVLVA----GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV  401 (403)
T ss_pred             CceEEEEEecCcchhHHHHHHHHHH-HCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4788998886432 13567888776 689999874    35799998777 69999999999999998764

>PRK14012 cysteine desulfurase; Provisional

Probab=99.97  E-value=1.5e-27  Score=226.44  Aligned_cols=332  Identities=15%  Similarity=0.117  Sum_probs=226.7

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhc--CCCCCCCC--CCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVW--DPSISKYG--ADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~y~--~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      +.|+.+... ++|+.+++++.+++.  +.......  ...+  .....+++.+.+++..|.+++++++++|+|++++.++
T Consensus         5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l   83 (404)
T PRK14012          5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI   83 (404)
T ss_pred             EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence            566666543 567889999988775  22111110  0001  1234445555566666888899999999999999998


Q ss_pred             HHhc----CCCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768          107 LTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (400)
Q Consensus       107 ~~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~  179 (400)
                      .++.    ++||+|+++.++|++....+   +..|++++.+ +.++++ .+|++.+++.+++++  +++++++++||||.
T Consensus        84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v-~~~~~g-~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~  159 (404)
T PRK14012         84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-DPQSNG-IIDLEKLEAAMRDDT--ILVSIMHVNNEIGV  159 (404)
T ss_pred             HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE-ccCCCC-cCCHHHHHHhcCCCC--EEEEEECcCCCccc
Confidence            8774    78999999999998876544   4469999999 777554 689999999998766  89999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      +.|   +++|.++|+++|+++|+|++++...   .+......+.++++.|++|.+| |+ ++|+++.+++   ...++..
T Consensus       160 ~~~---~~~I~~la~~~g~~vivD~a~~~g~---~~~~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~---~~~~~~~  228 (404)
T PRK14012        160 IQD---IAAIGEICRERGIIFHVDAAQSVGK---VPIDLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRK---PRVRLEA  228 (404)
T ss_pred             hhh---HHHHHHHHHHcCCEEEEEcchhcCC---cccCcccCCCCEEEEehhhccC-CC-ceEEEEEecC---CCCCCCc
Confidence            999   8899999999999999999998432   2222223456788899999876 43 5788777742   1111211


Q ss_pred             h-hc------cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-----CCceEEEeeCC
Q 015768          260 V-QD------NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIYLWARLP  327 (400)
Q Consensus       260 ~-~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~  327 (400)
                      . ..      ....+.+.....++..++.....+.....++.+++++++.+.|++++.+.+.+.     .....+++.+.
T Consensus       229 ~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~  308 (404)
T PRK14012        229 QMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV  308 (404)
T ss_pred             eecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc
Confidence            0 00      112233444444444554432233456677888888999999988765443321     11234455543


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                          +.+++...|   .++.+..|..|..                   .+.+|++++. +|++|++.+++.|+++++++.
T Consensus       309 ----~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~  381 (404)
T PRK14012        309 ----EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR  381 (404)
T ss_pred             ----CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence                234565544   3777777755521                   3689999998 999999999999999988764

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.97  E-value=1.3e-27  Score=227.57  Aligned_cols=349  Identities=13%  Similarity=0.073  Sum_probs=238.6

Q ss_pred             hcCCCeEEcCCCCCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+...  ++ .+|++.+++.+.+.+.... +......+ ...++++++.+..+.+. +.+++++++++|+
T Consensus        38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~-~~~~~~~~-~~~~la~~l~~~~~~~~~~~~~f~~sGsea~  115 (425)
T PRK08088         38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHT-CFQVLAYE-PYLELCEKMNQKVPGDFAKKTLLVTTGSEAV  115 (425)
T ss_pred             CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCc-cccccCCH-HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence            567889999887633  33 5899999999998864321 21222233 34478888877655433 5889999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEE----------------EEeccCCCCCCCC--CHHHHHHhhcc-
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTH----------------ILVGPCSSKTLHP--DADWLEKTLET-  161 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~----------------~~~~~~~~~~~~~--~~e~l~~~l~~-  161 (400)
                      +.+++...  .....|+...++|++....+...+...                +.+ |.+..+...  +++.+++.+.. 
T Consensus       116 e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~  194 (425)
T PRK08088        116 ENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALY-PCPLHGVSEDDAIASIERIFKND  194 (425)
T ss_pred             HHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCC-CccccCccHHHHHHHHHHHHHhc
Confidence            98888764  233567788999999876554433211                112 222222111  14568877751 


Q ss_pred             --CCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          162 --KPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       162 --~~~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                        ...+++++++.. +++++..++.+++++|.++|++||+++|+||+|.++...+........+.++.+.||||.++ +|
T Consensus       195 ~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G  273 (425)
T PRK08088        195 AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIA-GG  273 (425)
T ss_pred             cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEecccc-CC
Confidence              234677777744 56666788999999999999999999999999997655443222112234455789999998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG  316 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  316 (400)
                      +|+||++.+   +++++.+.......+++.+++.+.++..+|+...  +...+.++...+..+.+.+.+...+.+....+
T Consensus       274 ~rig~v~~~---~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g  350 (425)
T PRK08088        274 FPLAGVTGR---AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG  350 (425)
T ss_pred             CcceeeEec---HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec
Confidence            999999998   7888888776667788899999999999998632  33444444444444445444444554323333


Q ss_pred             CCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          317 EGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       317 ~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      . |.++|+.+....       ....++...+. ++||.+.++..+  ++.+|++++. .+++++++++++|.+++++.
T Consensus       351 ~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~  424 (425)
T PRK08088        351 L-GAMIAIELFEDGDHSKPNAKLTAQIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA  424 (425)
T ss_pred             c-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence            3 888999984221       12456777665 789998875543  5889999996 78999999999999999753

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.96  E-value=3e-27  Score=222.14  Aligned_cols=334  Identities=13%  Similarity=0.106  Sum_probs=224.1

Q ss_pred             EEcCCCC-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           33 VSLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        33 i~~~~~~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++|++++ ..+..+|++++++.+++++..      ...|+......++++++++++    |.+ +.+++++ ++.++..+
T Consensus         1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~----g~e-~al~~~s-G~~a~~~~   74 (392)
T PLN03227          1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL----GTE-SAILYSD-GASTTSST   74 (392)
T ss_pred             CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh----CCC-cEEEecC-cHHHHHHH
Confidence            3566654 666788999999998887621      222544445566666666666    543 4444444 55666688


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc---------CCCCeEEEEeCCCCC
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---------KPTPKLVSVVNPGNP  176 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~---------~~~~~~v~l~~p~np  176 (400)
                      +.++.++||.|+++.+.|.++...++..+++++.+ +..+.   -+++.+.+.+..         .+..++|++++++|+
T Consensus        75 i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~-~~~d~---~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~  150 (392)
T PLN03227         75 VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWF-RHNDM---KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKN  150 (392)
T ss_pred             HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEe-CCCCH---HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCC
Confidence            88899999999999999999988877778887777 44311   133343333421         123588888899999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--C---cccc--CCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  249 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~  249 (400)
                      +|.+.|   ++++.++|++||+++|+||+|+....+..  .   +...  ..+.++++.|+||.+|..   .|+++++  
T Consensus       151 ~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v~~~--  222 (392)
T PLN03227        151 TGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMTVGS--  222 (392)
T ss_pred             CCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEEecC--
Confidence            999999   88999999999999999999983333221  1   1011  235589999999987633   4888887  


Q ss_pred             cHHHHHHHHHhhccCCcCc--cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc---------cCCCC
Q 015768          250 VEGFATQLLKVQDNIPICA--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV---------KGGEG  318 (400)
Q Consensus       250 ~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---------~~~~~  318 (400)
                       +++++.+.......+++.  +++.+.++..++....+ .+++.++++++.+++++.|++.+...+         .....
T Consensus       223 -~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~  300 (392)
T PLN03227        223 -EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA-GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPI  300 (392)
T ss_pred             -HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCC
Confidence             677766654444344444  35566666666643111 246777888889999998875322111         11122


Q ss_pred             ceEEEeeCCCCCC--------CHHHHHHHHHHhcCeEEeCCC-------ccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHL--------DDFEVVRWLAHRHGVVVIPGG-------ACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       319 ~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~-------~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      ++++.+.+.+...        ...++++.+. ++|+.+.+..       .+..+..+|++++. +|++|+++++++|+++
T Consensus       301 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~  379 (392)
T PLN03227        301 SPIIYLRLSDQEATRRTDETLILDQIAHHSL-SEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEA  379 (392)
T ss_pred             CCEEEEEeCCHHHhhhhhhhhHHHHHHHHHH-HCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence            5566666643110        1236777665 7899986422       12346789999998 9999999999999999


Q ss_pred             HHHHh
Q 015768          383 LEELV  387 (400)
Q Consensus       383 l~~~~  387 (400)
                      ++++.
T Consensus       380 ~~~~~  384 (392)
T PLN03227        380 VEAIL  384 (392)
T ss_pred             HHHHH
Confidence            98874

>PRK07049 methionine gamma-lyase; Validated

Probab=99.96  E-value=2.1e-27  Score=224.69  Aligned_cols=291  Identities=17%  Similarity=0.171  Sum_probs=208.0

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  142 (400)
                      .+....+++.++++.    |  .+++++++|+++|+..++.+++++||+|+++.|+|.++...+    +..|++++.+ +
T Consensus        82 ~Pt~~~Le~~lA~le----g--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~-~  154 (427)
T PRK07049         82 HPNSEIVEDRLAVYE----G--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGF-A  154 (427)
T ss_pred             CcCHHHHHHHHHHHh----C--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEE-e
Confidence            444567777777765    4  457889999999999999999999999999999999987654    5679887777 4


Q ss_pred             CCCCCCCCCHHHHHHhhcc---CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH---cCCEEEEcccccccccCCCCc
Q 015768          143 CSSKTLHPDADWLEKTLET---KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA---AGSWLVVDNTYEYFMYDGRKH  216 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~---~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~---~~~~li~D~a~~~~~~~~~~~  216 (400)
                      .   +  .|.+.+++.+.+   ...+++|++++|+||||.+++.+++.+|++.|+.   +++++|+|++|.......   
T Consensus       155 ~---~--~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~---  226 (427)
T PRK07049        155 D---G--LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK---  226 (427)
T ss_pred             C---C--CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC---
Confidence            1   1  366777766641   1235999999999999999998888777777543   789999999987543322   


Q ss_pred             cccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 015768          217 CCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV  295 (400)
Q Consensus       217 ~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  295 (400)
                       ....+.++++.|+||.+| .+|+|+||++.+   +++++.+...+.....+.+++.++++...|+.    +..+++++.
T Consensus       227 -pl~~g~divv~S~SK~~gG~~glr~G~vv~~---~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t----l~~R~~~~~  298 (427)
T PRK07049        227 -PLEHGADLSVYSLTKYVGGHSDLVAGAVLGR---KALIRQVRALRSAIGTQLDPHSCWMLGRSLET----LVLRMERAN  298 (427)
T ss_pred             -ccccCCCEEEEcCceeecCCCCcEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh----HHHHHHHHH
Confidence             223456799999999998 589999999988   78888888877766677888999988888864    566777889


Q ss_pred             HHHHHHHHHhccCCCC-cccCCC------------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-
Q 015768          296 RNREIIREALSPLGEG-AVKGGE------------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-  355 (400)
Q Consensus       296 ~~~~~l~~~L~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-  355 (400)
                      +++..+.+.|++++.+ ++..|.                  .|-.+.+.+........++++.| +=..+.+.-|.... 
T Consensus       299 ~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~l~~~~~slG~~~sl  377 (427)
T PRK07049        299 RNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNAL-QIFKLAVSLGGTESL  377 (427)
T ss_pred             HHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcC-cccEEcccCCCCCce
Confidence            9999999999988653 222221                  13355556642111122333332 11122222222110 


Q ss_pred             ----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          356 ----------------------CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       356 ----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                                            .++.||||++.   |+.+++++.|.++|.
T Consensus       378 i~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~  425 (427)
T PRK07049        378 ASHPASMTHSGVPADVRERIGVLESTIRLSIGI---EHPDDLIADLAQALD  425 (427)
T ss_pred             eeCCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence                                  13579999997   677788888888886

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=1.1e-26  Score=210.22  Aligned_cols=327  Identities=21%  Similarity=0.218  Sum_probs=259.5

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      ..+++|++++.+-.    .+.  .++....+.+.+.+.+...++.+. +-+++++++|.+++.++.++.+|||+|++...
T Consensus        15 ~v~~~V~~am~~~~----~~h--~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~n   88 (383)
T COG0075          15 PVPPRVLLAMARPM----VGH--RSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVN   88 (383)
T ss_pred             CCCHHHHHHhcCCC----CCC--CCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeC
Confidence            34677777665543    222  344567777777788888888774 55666788999999999999999999999999


Q ss_pred             Cccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768          122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (400)
Q Consensus       122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (400)
                      +.++  +.++++..|.+++.+ .. ++|-.++++++++.|+.++..++|.++|...+||+..|   +++|+++|++||.+
T Consensus        89 G~FG~R~~~ia~~~g~~v~~~-~~-~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l  163 (383)
T COG0075          89 GKFGERFAEIAERYGAEVVVL-EV-EWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGAL  163 (383)
T ss_pred             ChHHHHHHHHHHHhCCceEEE-eC-CCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcCCE
Confidence            8877  558999999999888 44 36678899999999997777899999999999999999   99999999999999


Q ss_pred             EEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH----------------hh--
Q 015768          200 LVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK----------------VQ--  261 (400)
Q Consensus       200 li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~----------------~~--  261 (400)
                      +|+|.+.+   +++.+....+++.|+++.+..|+++.| ..+|.+..+   ++..+++..                ..  
T Consensus       164 ~iVDaVsS---~Gg~~~~vd~wgiDv~itgSQK~l~~P-PGla~v~~S---~~a~e~~~~~~~~~~ylDL~~~~~~~~~~  236 (383)
T COG0075         164 LIVDAVSS---LGGEPLKVDEWGIDVAITGSQKALGAP-PGLAFVAVS---ERALEAIEERKHPSFYLDLKKWLKYMEKK  236 (383)
T ss_pred             EEEEeccc---CCCcccchhhcCccEEEecCchhccCC-CccceeEEC---HHHHHHHhcCCCCceeecHHHHHHHHhhc
Confidence            99999988   567777788889999999999999743 346777777   343333321                11  


Q ss_pred             ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC--CCceEEEeeCCCCCCCHHHHHH
Q 015768          262 DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGAIYLWARLPEKHLDDFEVVR  338 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  338 (400)
                      ..++++++....+++..+|+.- ++.++++.++++++.+.+++.++.+|+..+..+  .+.....+.+|.+. +..++..
T Consensus       237 ~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~-~~~~~~~  315 (383)
T COG0075         237 GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGV-DDKKVRR  315 (383)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCC-CcHHHHH
Confidence            3567889999999999999862 255899999999999999999999988333322  22355667788765 4444555


Q ss_pred             HHHHhcCeEEeCCCccCCCCeEEEEe-ccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          339 WLAHRHGVVVIPGGACGCRGHLRISF-GGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       339 ~l~~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .+++++|+.+.+|........+||+. +..+.+++..++.+|..+++++-.
T Consensus       316 ~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~  366 (383)
T COG0075         316 ALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV  366 (383)
T ss_pred             HHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence            78888999999998877889999984 448999999999999999998754

>PLN02651 cysteine desulfurase

Probab=99.96  E-value=7.7e-28  Score=225.38  Aligned_cols=311  Identities=16%  Similarity=0.091  Sum_probs=222.9

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCC----CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh----cCCCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYG----ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL----CDAGD  114 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~----~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l----~~~gd  114 (400)
                      ++|+++++++.+.+.........    ......++.+.+.+.+++.+|.+++++++++|+|++++.++.++    .++||
T Consensus        10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~   89 (364)
T PLN02651         10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKK   89 (364)
T ss_pred             CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCC
Confidence            56789999998877542111110    11122445556666677777888899999999999988887665    46899


Q ss_pred             EEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768          115 SVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (400)
Q Consensus       115 ~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~  191 (400)
                      +|++....|+++...+   +..|++++.+ |.+++ +.+|++++++.+++++  +++++++++|+||.+.|   +++|.+
T Consensus        90 ~vl~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t--~lv~v~~~~n~tG~~~~---l~~I~~  162 (364)
T PLN02651         90 HVITTQTEHKCVLDSCRHLQQEGFEVTYL-PVKSD-GLVDLDELAAAIRPDT--ALVSVMAVNNEIGVIQP---VEEIGE  162 (364)
T ss_pred             EEEEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCc--EEEEEECCCCCceeccc---HHHHHH
Confidence            9999998998765443   4568898888 87654 4679999999998766  99999999999999999   889999


Q ss_pred             HHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccC
Q 015768          192 LCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNI  264 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------~~~  264 (400)
                      +|+++|+++++|++++..   ..+......+.++++.|.+|++|  +..+|+++.++   +....+....       ...
T Consensus       163 ~~~~~g~~~~vD~a~~~g---~~~~~~~~~~~D~~~~s~hK~~g--p~G~g~l~v~~---~~~~~l~p~~~g~~~~~~~~  234 (364)
T PLN02651        163 LCREKKVLFHTDAAQAVG---KIPVDVDDLGVDLMSISGHKIYG--PKGVGALYVRR---RPRVRLEPLMSGGGQERGRR  234 (364)
T ss_pred             HHHHcCCEEEEEcchhhC---CcccCcccCCCCEEEechhhhCC--CCceEEEEEcC---CCCCCCCccccCCCccCCcc
Confidence            999999999999999843   23333445567899999999754  34578887774   2222221111       112


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCC-----CceEEEeeCCCCCCCHHHHHH
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGE-----GAIYLWARLPEKHLDDFEVVR  338 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  338 (400)
                      ..+++.....++..+|+...+..+...++.+++.+++.+.|++ ++++++..+.     ....+.+.++.  .+.+++..
T Consensus       235 ~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~--~~~~~~~~  312 (364)
T PLN02651        235 SGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY--VEGESLLM  312 (364)
T ss_pred             CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC--CCHHHHHH
Confidence            4567777777777777753334566778888889999999875 5555665541     12355556653  36778888


Q ss_pred             HHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHH
Q 015768          339 WLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCK  373 (400)
Q Consensus       339 ~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~  373 (400)
                      .|. +  |.+..|..|..                   .+.+|+|++. +|++|++
T Consensus       313 ~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        313 GLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             HhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence            773 4  99998887632                   2689999998 8998874

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.96  E-value=5.3e-27  Score=220.86  Aligned_cols=288  Identities=19%  Similarity=0.182  Sum_probs=210.9

Q ss_pred             CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEec
Q 015768           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG  141 (400)
Q Consensus        66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~  141 (400)
                      +.++..+++++++++.    |.  ++.++++|++.|+..++.+++++||+|+++.|.|......    ++..|++++.+ 
T Consensus        62 ~~p~~~~Le~~iA~~~----g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-  134 (400)
T PRK06234         62 GNPTSTEVENKLALLE----GG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFV-  134 (400)
T ss_pred             CCccHHHHHHHHHHHh----CC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEE-
Confidence            5677888999999887    42  4678899999999999999999999999999999775543    46789999888 


Q ss_pred             cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCcccc
Q 015768          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCV  219 (400)
Q Consensus       142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~  219 (400)
                      +..      |++++++.+++++  ++|++++|+||+|.+.+   +++|.++|+++  |+++|+|++|..+....    ..
T Consensus       135 d~~------d~e~l~~~i~~~t--klI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~----~l  199 (400)
T PRK06234        135 DTS------NLEEVRNALKANT--KVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR----PL  199 (400)
T ss_pred             CCC------CHHHHHHHhccCC--eEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC----ch
Confidence            542      7889999998766  99999999999999999   88889999997  99999999998665432    12


Q ss_pred             CCCcEEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768          220 EGDHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  296 (400)
Q Consensus       220 ~~~~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  296 (400)
                      ..+.++++.|++|+++.+|.+ .||++++   ++++++++..  ....+...++...+.+...|+.    +..++++..+
T Consensus       200 ~~g~Divv~S~sK~l~g~g~~~gG~v~~~---~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t----l~~r~~~~~~  272 (400)
T PRK06234        200 QLGADVVVHSATKYLNGHGDVIAGFVVGK---EEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT----LQIRMEKHCK  272 (400)
T ss_pred             hhCCcEEEeeccccccCCCCceeEEEEec---HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHH
Confidence            335679999999999877765 5999988   6777777643  2233455677777666666654    5667777888


Q ss_pred             HHHHHHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----
Q 015768          297 NREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----  355 (400)
Q Consensus       297 ~~~~l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----  355 (400)
                      +..++.+.|++++.+. +..|                ..+-++.++++.......++.+.| +-.++.+.-|....    
T Consensus       273 na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~  351 (400)
T PRK06234        273 NAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNV-KLATLAVSLGDAETLIQH  351 (400)
T ss_pred             HHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhC-CcceEeccCCCCCceecC
Confidence            8899999998876531 2111                123455667753221234555544 34454444443321    


Q ss_pred             -------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 -------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 -------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                         .++.+|||++.   |+.+++++.|++|+...
T Consensus       352 p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~~  398 (400)
T PRK06234        352 PASMTHSPYTAEERKEAGISDGLVRLSVGL---EDVDDIIADLKQALDLI  398 (400)
T ss_pred             CccCCCCCCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHHH
Confidence                               13689999997   66778888888888764

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.96  E-value=7.6e-27  Score=217.34  Aligned_cols=318  Identities=13%  Similarity=0.077  Sum_probs=224.1

Q ss_pred             CCeEEcCCCCCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           30 KNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        30 ~~~i~~~~~~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      +++|+-......+   .+|+++++++.++.++     |.   +.+++++++++++++.+|.  +++++++|+|+|+..++
T Consensus         8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al   77 (363)
T TIGR01437         8 KKVINASGKMTILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSV   77 (363)
T ss_pred             ceEEECCcEeecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHH
Confidence            4556655544332   3789999999998654     32   3568889999999888885  47899999999999999


Q ss_pred             HHhcCCCC---------------EEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeE
Q 015768          107 LTLCDAGD---------------SVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL  167 (400)
Q Consensus       107 ~~l~~~gd---------------~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~  167 (400)
                      .++.++||               +|+++.|.|..+    ...+...|++++++ +.+   +.+|++++++++++++  ++
T Consensus        78 ~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v-~~~---~~~d~~~le~ai~~~t--~a  151 (363)
T TIGR01437        78 AAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEA-GYA---NECSAEQLEAAITEKT--AA  151 (363)
T ss_pred             HHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEE-cCC---CCCCHHHHHHhcChhc--eE
Confidence            99999998               899999877655    46778889999988 653   3589999999998877  76


Q ss_pred             EE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEc
Q 015768          168 VS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       168 v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      ++ +++++||+|.+.|   +++|.++|++||+++|+|++|+.-.   .  .....+.+++++|+||++  +|++.|+++.
T Consensus       152 i~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~---~--~~~~~g~D~~~~S~~K~l--~gp~~G~l~~  221 (363)
T TIGR01437       152 ILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL---Q--KYYRLGADLVIYSGAKAI--EGPTSGLVLG  221 (363)
T ss_pred             EEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch---H--HHHHcCCCEEEEeCCccc--CCCceEEEEE
Confidence            65 5678999999999   7889999999999999999997211   1  111224578889999987  4677999988


Q ss_pred             cCCcHHHHHHHHHhhccC-----CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC--Cc
Q 015768          247 PSEVEGFATQLLKVQDNI-----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GA  319 (400)
Q Consensus       247 ~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~  319 (400)
                      +   +++++.+.......     ..+.+..++.++...+..   +..+..+...++++.+++.|++++++.+..+.  .+
T Consensus       222 ~---~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~---~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~  295 (363)
T TIGR01437       222 K---KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS---TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAG  295 (363)
T ss_pred             c---HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc---cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Confidence            7   67777664322211     111223344444433332   12233334445677899999998775554211  11


Q ss_pred             -----eEEEeeCCCCCCCHHHHHHHHHHhcC--eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          320 -----IYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       320 -----~~~~~~~~~~~~~~~~~~~~l~~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                           ..+.+.......+..++.++|. +++  |.+++  .+...+.+|+++..++++|++.++++|++.
T Consensus       296 ~~~~~~~v~~~~~~~g~~~~~l~~~L~-~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~  362 (363)
T TIGR01437       296 RDIARAEIRFDESELGMTAADVVQALR-QGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIREI  362 (363)
T ss_pred             CcCceEEEEEeccCCCCCHHHHHHHHh-cCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence                 1222333222357889999874 566  66654  355688999999888899999999998775

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=4.4e-27  Score=210.48  Aligned_cols=343  Identities=17%  Similarity=0.201  Sum_probs=249.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..|.  +.++ .+|.+++++.+..++-+..+   ..-..+.+.++++.|.+..+ ..+.++|++|+++|++
T Consensus        39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s---n~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~E  114 (404)
T COG4992          39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS---NLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANE  114 (404)
T ss_pred             CCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc---cccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHH
Confidence            4578999998876  5554 79999999999887633111   11234566677777776655 5899999999999999


Q ss_pred             HHHHHhcC----C-CCEEEEeCCCccchhHHHHhcCcEEEEe---ccCCCC----CCCCCHHHHHHhhccCCCCeEEEEe
Q 015768          104 NIVLTLCD----A-GDSVVMFAPYYFNSYMSFQMTGVTHILV---GPCSSK----TLHPDADWLEKTLETKPTPKLVSVV  171 (400)
Q Consensus       104 ~~~~~l~~----~-gd~vlv~~p~~~~~~~~~~~~g~~~~~~---~~~~~~----~~~~~~e~l~~~l~~~~~~~~v~l~  171 (400)
                      .++....+    + ..+|+....+|++-....-..+.+..+-   .|..+.    .++ |++++++++++++  .+|+++
T Consensus       115 aAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~~t--aAvivE  191 (404)
T COG4992         115 AALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDEDT--AAVIVE  191 (404)
T ss_pred             HHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhccCe--EEEEEe
Confidence            99998752    2 2478888888877443332222222111   022111    122 8999999999866  999999


Q ss_pred             CCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768          172 NPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  250 (400)
Q Consensus       172 ~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~  250 (400)
                      ..+-..|++ .+.++++++.++|++||+++|.||++.++...|.-+.....+....+.++.|.+| +|+++|.++.+   
T Consensus       192 PIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~Lg-GG~PigA~la~---  267 (404)
T COG4992         192 PIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALG-GGFPIGAMLAT---  267 (404)
T ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeecccc-CCccceeeEEc---
Confidence            889999986 5777899999999999999999999998876664332222232233457789998 88999999988   


Q ss_pred             HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceEEEeeC
Q 015768          251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIYLWARL  326 (400)
Q Consensus       251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~  326 (400)
                      +...+.+....+..+|+.|+++..++.+.|+.-.  -++..++.++..++|.+.|+++    +.++-++.. |+++-+.+
T Consensus       268 ~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~--~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~-GLmiGiel  344 (404)
T COG4992         268 EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL--EEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGR-GLMIGIEL  344 (404)
T ss_pred             hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecc-eeEEEEEe
Confidence            5666777777788899999999999999988522  1345555666666666666653    434445555 77777777


Q ss_pred             CCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          327 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      .... ....+...+. ++|+++.+.    .++.+||.+.. ++++++++++++|.+++......
T Consensus       345 ~~~~-~a~~~~~~~~-~~gvL~~~a----~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~~  402 (404)
T COG4992         345 KEPY-RARDIVRALR-EEGVLVLPA----GPNVIRFLPPLVITEEEIDEALDALERALAAASAR  402 (404)
T ss_pred             cCcc-cHHHHHHHHH-HCCeEEecC----CCCeEEecCCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence            6532 4677787775 899999874    47799999988 89999999999999999987643

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.96  E-value=8.7e-27  Score=221.36  Aligned_cols=342  Identities=12%  Similarity=0.094  Sum_probs=230.6

Q ss_pred             hcCCCeEEcCCCCCCC--C-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVVYW--Q-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~--~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+....  + .+|++++++.+.+.+.....  ... ..+..+.+++.+.+..+  .+.++++++|++|++
T Consensus        28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~--~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~SGs~A~e  102 (400)
T PTZ00125         28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS--RAF-YNDVLGLAEKYITDLFG--YDKVLPMNSGAEAGE  102 (400)
T ss_pred             CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc--ccc-cCHHHHHHHHHHHhCCC--CCEEEEeCCcHHHHH
Confidence            4678899998876433  2 68999999999887532211  111 12345566666665555  368999999999999


Q ss_pred             HHHHHhcC----------CCCEEEEeCCCccchhHHH-HhcCcEEEE--eccCCCCC---CCCCHHHHHHhhccCCCCeE
Q 015768          104 NIVLTLCD----------AGDSVVMFAPYYFNSYMSF-QMTGVTHIL--VGPCSSKT---LHPDADWLEKTLETKPTPKL  167 (400)
Q Consensus       104 ~~~~~l~~----------~gd~vlv~~p~~~~~~~~~-~~~g~~~~~--~~~~~~~~---~~~~~e~l~~~l~~~~~~~~  167 (400)
                      .+++.+..          .+++|++.+.+|++..... ...+.....  +.+..+.-   ...|++++++.++. ..+++
T Consensus       103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~  181 (400)
T PTZ00125        103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD-PNVAA  181 (400)
T ss_pred             HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC-CCeEE
Confidence            99998741          3478999999988866433 222211100  00111100   01278999999862 23589


Q ss_pred             EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcceeEEE
Q 015768          168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYI  244 (400)
Q Consensus       168 v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i  244 (400)
                      |+++.++||+|.+.+ .+++++|.++|++||+++|+||+|..+...+......  ....+++  ++||+++.+++|+||+
T Consensus       182 v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~--~~sK~l~~g~~~ig~v  259 (400)
T PTZ00125        182 FIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV--LLGKALSGGLYPISAV  259 (400)
T ss_pred             EEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE--EEcccccCCCcCcEEE
Confidence            998888999999886 5679999999999999999999998765544321111  1112333  4689997333599999


Q ss_pred             EccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCce
Q 015768          245 AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAI  320 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~  320 (400)
                      +.+   +++.+.+.......+++.+++.+.++.++|+...+  ....++..++.+.+++.|+++    +.+....+. +.
T Consensus       260 ~~~---~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~  333 (400)
T PTZ00125        260 LAN---DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE--EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGK-GL  333 (400)
T ss_pred             EEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecc-cE
Confidence            998   78888876555555677888888888777764111  123344445556666656543    332333443 77


Q ss_pred             EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          321 YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       321 ~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +.++.++.. ..+..+++..|+ ++||.+.|+    ..+++||+++. .+++++++++++|.+++.++.
T Consensus       334 ~~~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~  397 (400)
T PTZ00125        334 LNAIVFDHSDGVNAWDLCLKLK-ENGLLAKPT----HDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD  397 (400)
T ss_pred             EEEEEEccCcchHHHHHHHHHH-HCCeEEeec----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence            777777631 224567888776 789999885    36799999865 799999999999999998864

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.96  E-value=8.1e-27  Score=221.45  Aligned_cols=331  Identities=14%  Similarity=0.116  Sum_probs=230.1

Q ss_pred             hcCCCeEEcCCCCCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.....   .+|++.+++.+.+.+......  . ...+...++++.+.+..+  .+.+++++++++|++
T Consensus        38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~--~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e  112 (401)
T PRK00854         38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR--A-FRNDQLAPLYEELAALTG--SHKVLPMNSGAEAVE  112 (401)
T ss_pred             CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc--c-cCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence            45788999988764332   489999999999886432211  1 112344555555655545  368999999999999


Q ss_pred             HHHHHhcC---------CC-CEEEEeCCCccchhHHHHhcCcE-------------EEEeccCCCCCCCCCHHHHHHhhc
Q 015768          104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLE  160 (400)
Q Consensus       104 ~~~~~l~~---------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~e~l~~~l~  160 (400)
                      .+++++..         +| ++|++...+|++....+...+..             +..+ |      ..|++.+++.+.
T Consensus       113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~d~~~le~~i~  185 (401)
T PRK00854        113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVV-P------FGDAEALEAAIT  185 (401)
T ss_pred             HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEe-C------CCCHHHHHHHhC
Confidence            99999852         23 68899988888865444332221             1222 1      137899999987


Q ss_pred             cCCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCC
Q 015768          161 TKPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       161 ~~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~  237 (400)
                      +++  ++|++++|+||+|.+.+ .+++++|.++|++||+++|+||+|.++...+.....  .....++++  ++|+++.+
T Consensus       186 ~~~--~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~--~~K~l~gg  261 (401)
T PRK00854        186 PNT--VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL--IGKALSGG  261 (401)
T ss_pred             CCe--EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE--ecccccCC
Confidence            655  99999999999999887 556999999999999999999999866544321111  111123433  36999733


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc--cC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KG  315 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~  315 (400)
                      .+++|+++++   +++.+.+.......+++.+++.+.++.++|+...+  ....+.++++.+++.+.|++++...+  ..
T Consensus       262 ~~~ig~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  336 (401)
T PRK00854        262 FYPVSAVLSN---SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE--EGMIENAAEMGAYFLEGLRSIRSNIVREVR  336 (401)
T ss_pred             ccCeEEEEEc---HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHhhccCceEEEe
Confidence            3799999998   77877776555556677899999999999875211  23567778888889998888654212  23


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      +. +.++.+.+.....+..++++.|. ++||.+.+.    ..+++|++++. ++++++++++++|++++.
T Consensus       337 g~-g~~~~i~~~~~~~~~~~~~~~L~-~~GV~v~~~----~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        337 GR-GLMLAVELEPEAGGARQYCEALK-ERGLLAKDT----HDHTIRLAPPLVITREQVDWALEQIAKVLA  400 (401)
T ss_pred             cc-ceEEEEEEecCchhHHHHHHHHH-HCCeEEecC----CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence            44 44444444222124677888886 689999753    35799999875 799999999999998874

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.96  E-value=2.1e-26  Score=210.43  Aligned_cols=332  Identities=19%  Similarity=0.172  Sum_probs=246.8

Q ss_pred             cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++++++|++++ ..+..+|++++++.+.+.+...+.-++  ..|...+...+.+.+++.+|  .+..++.+++..|+..
T Consensus        37 ~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--~e~al~f~SGy~AN~~  114 (388)
T COG0156          37 DGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--AEAALLFSSGFVANLG  114 (388)
T ss_pred             CCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--CCcEEEEcccchhHHH
Confidence            368899999987 777889999999999988732221111  24444444444444444446  3466777777799999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--C--CCeEEEEeCCCCCCccC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--P--TPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~--~~~~v~l~~p~nptG~~  180 (400)
                      ++.+|++++|.|+...-.|.+..+.++..+++++.+ ..      .|+++|++.+++.  .  ++++|+........|.+
T Consensus       115 ~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f-~H------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdi  187 (388)
T COG0156         115 LLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRF-KH------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDI  187 (388)
T ss_pred             HHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEe-cC------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCc
Confidence            999999999999999999999999999999999888 43      3889999999741  1  24777777888899999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----ccccC-CCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      .|   |.+|.+++++|+.++++||+|+.+.++...     +.... .+.+++++|++|++|..|   ||+.++   ..++
T Consensus       188 Ap---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~---~~~~  258 (388)
T COG0156         188 AP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGS---AALI  258 (388)
T ss_pred             CC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCc---HHHH
Confidence            99   999999999999999999999988876432     12222 455899999999998777   999999   7888


Q ss_pred             HHHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768          255 TQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD  332 (400)
Q Consensus       255 ~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (400)
                      +.+......+  +.+.++....++..+++.. +....++++++++...+++.++..+. .+.+.. ..++.+-+.+.. .
T Consensus       259 d~L~~~ar~~ifStalpP~~aaa~~~al~~l-~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~-s~I~pv~~gd~~-~  334 (388)
T COG0156         259 DYLRNRARPFIFSTALPPAVAAAALAALRIL-EEGPERRERLQELAAFFRSLLKALGL-VLLPSE-SPIIPVILGDEE-R  334 (388)
T ss_pred             HHHHHhCCceeccCCCCHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCC-CCeeeeEeCCHH-H
Confidence            8887654433  3445666666777777752 33467888899999999877766665 333333 455544554321 3


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      ..++...|+ +.||++.+..++.   +...+|++++. +|++|++.+++.|.+.
T Consensus       335 a~~~s~~l~-~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         335 ALEASRALL-EEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             HHHHHHHHH-HCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence            566777777 4599998776664   34689999998 9999999999888764

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.96  E-value=1.2e-26  Score=223.28  Aligned_cols=327  Identities=17%  Similarity=0.179  Sum_probs=225.8

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHH---HHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALV---KKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~~~~~~a---~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ....++.|.+++..|..+.+.......   ...|.+  +......++.++   +++++.+|++.+++++++|+|++++.+
T Consensus        69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~---~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~  145 (447)
T PRK00451         69 YPSFLGAGAYDHYIPAVVDHIISRSEF---YTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAA  145 (447)
T ss_pred             CcccCcccccCCcCcHHHHHHHhchhH---HHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHH
Confidence            566778888777666665544432211   122333  011334555555   555888899888999999999999999


Q ss_pred             HHHhc-CCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768          106 VLTLC-DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       106 ~~~l~-~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~  180 (400)
                      +.++. .+||+|+++++.|+++...++.    .|++++.+ |.+++  .+|++++++.+++++  ++|++++| |+||.+
T Consensus       146 ~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~--~~d~~~l~~~i~~~t--~~v~l~~p-n~tG~v  219 (447)
T PRK00451        146 LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV-PYEDG--VTDLEALEAAVDDDT--AAVVVQYP-NFFGVI  219 (447)
T ss_pred             HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe-cCCCC--CCCHHHHHHhcCCCe--EEEEEECC-CCCCee
Confidence            98885 7899999999999888877654    68999999 88764  789999999998765  99999998 899999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEE--cccccccccCCCCccccCCCcEEEEe---ccccccCCCcceeEEEEccCCcHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVV--DNTYEYFMYDGRKHCCVEGDHVVNLF---SFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~--D~a~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      .+   +++|.++|+++|+++++  |.+..     +........+.+++++   +++|.++++|+++||++.+   +++++
T Consensus       220 ~~---l~~I~~~a~~~~~~~iv~~d~~~~-----g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~---~~~~~  288 (447)
T PRK00451        220 ED---LEEIAEIAHAGGALFIVGVDPVSL-----GLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATR---KKLVR  288 (447)
T ss_pred             CC---HHHHHHHHHHCCCEEEEEcChHHh-----ccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhh---HHHHh
Confidence            98   99999999999999998  54322     1111122345667777   4555566678899999888   66666


Q ss_pred             HHH----------------------------HhhccCCcCccHHHH-HHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          256 QLL----------------------------KVQDNIPICASIISQ-HLALYSLQ-TGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       256 ~l~----------------------------~~~~~~~~~~~~~~~-~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      .+.                            ......+...+...+ .++..++. .+.+.+++..+++.++++++++.|
T Consensus       289 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L  368 (447)
T PRK00451        289 QMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERL  368 (447)
T ss_pred             hCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Confidence            531                            011111111122222 33333333 234667888999999999999999


Q ss_pred             ccCCCCcccCCCCceEE--EeeCCCCCCCHHHHHHHHHHhcCeEE-eCCCccC--CCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          306 SPLGEGAVKGGEGAIYL--WARLPEKHLDDFEVVRWLAHRHGVVV-IPGGACG--CRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       306 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~gi~v-~~g~~~~--~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      ++++++.+.  .+.++.  .++++   .+..++.++|. ++||.. .++..+.  ..+++|++++. +++++++++++.|
T Consensus       369 ~~~~g~~~~--~~~~~~~~~v~~~---~~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L  442 (447)
T PRK00451        369 AEIGGVELF--DGPFFNEFVVRLP---KPAEEVNEALL-EKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAAL  442 (447)
T ss_pred             hhcCCEEec--CCCeEEEEEEecC---CCHHHHHHHHH-hcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHH
Confidence            998765554  224443  35554   24678999886 677763 3444433  24689999985 7999999999999


Q ss_pred             HHHH
Q 015768          380 RRGL  383 (400)
Q Consensus       380 ~~~l  383 (400)
                      ++.+
T Consensus       443 ~~~~  446 (447)
T PRK00451        443 GEVL  446 (447)
T ss_pred             HHHh
Confidence            8754

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.96  E-value=8.6e-27  Score=219.07  Aligned_cols=333  Identities=14%  Similarity=0.120  Sum_probs=234.3

Q ss_pred             hcCCCeEEcCCCC--CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      .+|+.++||..+.  ..++.+|++++++.+.+.+..  .+ +......+++++++.+.   +.....+++++++++|+..
T Consensus        26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~---~~~~~~~~~~~SGseA~~~   99 (375)
T PRK04260         26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW--HS-PNLYLNSLQEEVAQKLI---GDKDYLAFFCNSGAEANEA   99 (375)
T ss_pred             CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcC--cc-cCccCCHHHHHHHHHHh---cCcCCEEEEcCccHHHHHH
Confidence            4678899998763  556678999999999987632  12 22334667788888764   2122346889999999999


Q ss_pred             HHHHhc--CCCCEEEEeCCCccchh-HHHHhcCcEEE------EeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768          105 IVLTLC--DAGDSVVMFAPYYFNSY-MSFQMTGVTHI------LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus       105 ~~~~l~--~~gd~vlv~~p~~~~~~-~~~~~~g~~~~------~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                      +++...  .++++|++.+.+|++.. ..+...|....      .+ +........|++++++.+.++  .++|++++++|
T Consensus       100 Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dl~~l~~~l~~~--~a~vi~e~v~~  176 (375)
T PRK04260        100 AIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGV-PHFSYAIFNDLNSVKALVNKN--TAAVMLELVQG  176 (375)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCC-CCeEEeCCCCHHHHHHhcCCC--eEEEEECCeEC
Confidence            988874  34578999988887744 44433332110      01 000000013789999888654  48899999999


Q ss_pred             CCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768          176 PSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  252 (400)
Q Consensus       176 ptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~  252 (400)
                      ++|... +.+.++++.++|+++|+++|+||+|.++...+.....  .....+  +.||||.++ +|+|+||++.+   ++
T Consensus       177 ~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd--i~t~sK~l~-~G~~ig~~~~~---~~  250 (375)
T PRK04260        177 ESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD--IFTLAKGLA-NGVPVGAMLAK---SS  250 (375)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC--EEEeccccc-CCcceEEEEEc---HH
Confidence            999874 5678999999999999999999999876554432211  111122  448999997 89999999999   77


Q ss_pred             HHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC
Q 015768          253 FATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH  330 (400)
Q Consensus       253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  330 (400)
                      +.+.+.......+++.+++.+.++.++|+...  ++.++.++.....++.+.+.+.+.+.+..... .++++|+.++.  
T Consensus       251 ~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~--  327 (375)
T PRK04260        251 LGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRG-LGYMIGIETTA--  327 (375)
T ss_pred             HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cceEEEEEecC--
Confidence            77777654455677889999999999996532  44555556666666667666666643233323 48999999853  


Q ss_pred             CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          331 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       331 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                       +..++..++. ++||.+.|+    ..+.+|++++. ++++++++++++|++++
T Consensus       328 -~~~~~~~~l~-~~Gi~v~~~----~~~~lR~~~~~~~t~~~i~~~l~~l~~~~  375 (375)
T PRK04260        328 -DLSQLVEAAR-DKGLIVLTA----GTNVIRLLPPLTLTKEEIEQGIAILSEVF  375 (375)
T ss_pred             -cHHHHHHHHH-hCCCEEecC----CCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence             4667888775 799999875    35789999966 89999999999998763

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.96  E-value=2.2e-26  Score=218.01  Aligned_cols=345  Identities=15%  Similarity=0.132  Sum_probs=237.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+...  .+.. ...+...++++.+.+..+  .+.+++++++++|++
T Consensus        36 ~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e  110 (406)
T PRK12381         36 QQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH--TGNG-YTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANE  110 (406)
T ss_pred             CCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccc--ccCc-cCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHH
Confidence            5578899998863  3443 589999999999875311  1111 122334556666665543  479999999999999


Q ss_pred             HHHHHhc--------CCCCEEEEeCCCccchhHHHHhcCcEEEE---eccCCCC---CCCCCHHHHHHhhccCCCCeEEE
Q 015768          104 NIVLTLC--------DAGDSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK---TLHPDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus       104 ~~~~~l~--------~~gd~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~---~~~~~~e~l~~~l~~~~~~~~v~  169 (400)
                      .+++...        .+..+|+..+++|++........+.....   +.|..+.   -...|++.+++.+.++  +++|+
T Consensus       111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi  188 (406)
T PRK12381        111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQ--TCAVI  188 (406)
T ss_pred             HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCC--eeEEE
Confidence            9999863        13478999999999977544332221100   0011110   0123788999988654  47777


Q ss_pred             EeCCCCCCccC--CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768          170 VVNPGNPSGTY--IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       170 l~~p~nptG~~--~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      ++ |.+++|-+  .+.+.+++|.++|++||+++|+||+|.++...+........+...-+.+++|.+| +|+++||++.+
T Consensus       189 iE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~-gG~~ig~~~~~  266 (406)
T PRK12381        189 VE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALG-GGFPIGAMLTT  266 (406)
T ss_pred             Ee-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhh-CCCceEEEEEc
Confidence            75 77877654  3789999999999999999999999987765553221111111112458999998 89999999998


Q ss_pred             CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-Cc-ccCC-CCceEEEe
Q 015768          248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GA-VKGG-EGAIYLWA  324 (400)
Q Consensus       248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~-~~~~-~~~~~~~~  324 (400)
                         +++++.+.......+++.+++.+.++.+.|+...  ..+..++++++.+++.+.|+++.. .. +... ..+.++++
T Consensus       267 ---~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~  341 (406)
T PRK12381        267 ---EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGC  341 (406)
T ss_pred             ---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEE
Confidence               7888888765556678889999999888776421  235677788888888888877532 11 1112 23677788


Q ss_pred             eCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccC
Q 015768          325 RLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG  390 (400)
Q Consensus       325 ~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~  390 (400)
                      .++... .....+...+ .++||.+.+.    .++.+|++++. ++++++++++++|.+++.++..++
T Consensus       342 ~l~~~~~~~~~~~~~~l-~~~Gv~v~~~----g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~~  404 (406)
T PRK12381        342 VLNAEYAGKAKQISQEA-AKAGVMVLIA----GPNVVRFAPALNISEEEITTGLDRFARACERFVSRG  404 (406)
T ss_pred             EecCchhhHHHHHHHHH-HHCCcEEeeC----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            776421 1245666655 4899999763    35799999987 899999999999999999887664

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.96  E-value=9.4e-27  Score=219.85  Aligned_cols=341  Identities=16%  Similarity=0.145  Sum_probs=231.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+....  +.. ...+...++++.+.+..+  .+.++++++|++|++
T Consensus        32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~--~~~-~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e  106 (397)
T TIGR03246        32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHI--GNG-YTNEPVLRLAKKLVDATF--ADKVFFCNSGAEANE  106 (397)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccc--cCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence            4678999998863  4443 6999999999988763211  111 112344566666665544  469999999999999


Q ss_pred             HHHHHhc-------CC-CCEEEEeCCCccchhHH-HHhcCcEEEE--eccCCCCC---CCCCHHHHHHhhccCCCCeEEE
Q 015768          104 NIVLTLC-------DA-GDSVVMFAPYYFNSYMS-FQMTGVTHIL--VGPCSSKT---LHPDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus       104 ~~~~~l~-------~~-gd~vlv~~p~~~~~~~~-~~~~g~~~~~--~~~~~~~~---~~~~~e~l~~~l~~~~~~~~v~  169 (400)
                      .+++.+.       ++ .+.|+..+.+|++.... +...+.....  +.|..+.-   ...|++.+++.+.++  +++|+
T Consensus       107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi  184 (397)
T TIGR03246       107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDK--TCAVI  184 (397)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccC--eEEEE
Confidence            9999873       12 36788888888886533 3333321000  00111000   012789999988754  48888


Q ss_pred             EeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       170 l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      ++.++++.|... +.+++++|.++|++||+++|+||+|.++...+........+....+.+++|.+| +|+++|+++.+ 
T Consensus       185 ~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lg-gG~pigav~~~-  262 (397)
T TIGR03246       185 VEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALG-GGFPIGAMLTT-  262 (397)
T ss_pred             EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhh-CCcceeEEEEc-
Confidence            886677777654 889999999999999999999999977754443221111121222347899997 79999999998 


Q ss_pred             CcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC----CcccCCCCceEEEe
Q 015768          249 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE----GAVKGGEGAIYLWA  324 (400)
Q Consensus       249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~  324 (400)
                        +++.+.+.......+++.+++.+.++.+.|+...  .++..++++++.+++++.|+++..    +..+.+. +.++.+
T Consensus       263 --~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i  337 (397)
T TIGR03246       263 --TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN--TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGK-GLLIGA  337 (397)
T ss_pred             --HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC-ceEEEE
Confidence              7888777654455677788899888888887421  245667778888888888877542    1222333 455555


Q ss_pred             eCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          325 RLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       325 ~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+... ......++..|+ ++|+.+.+.    +++++|++++. ++++++++++++|.+++.++
T Consensus       338 ~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~  396 (397)
T TIGR03246       338 VLTEAYQGKAKQFVNAAA-EEGVIALIA----GPNVVRFAPSLVISDDDIDEGLARFERAIEQV  396 (397)
T ss_pred             EEcCchhhHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            55321 113567777775 789998763    24799998776 79999999999999998764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.96  E-value=2.2e-26  Score=216.29  Aligned_cols=315  Identities=20%  Similarity=0.194  Sum_probs=232.8

Q ss_pred             CCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHh---cCCCC
Q 015768           43 QPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL---CDAGD  114 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~----~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l---~~~gd  114 (400)
                      +.|+.|++++.+.+.+...    ..+.......++.+++.+.+++..|+++ ++|++++|+|.+++.++.++   .++||
T Consensus        10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~   89 (371)
T PF00266_consen   10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGD   89 (371)
T ss_dssp             B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTC
T ss_pred             CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccc
Confidence            5689999999888754211    1222222234555666666666669988 89999999999999999999   68999


Q ss_pred             EEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          115 SVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       115 ~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      +|++....|++...    ..+..|+++..+ +.+.++ .++++++++.+++++  +++++++.+|.+|...|   +++|.
T Consensus        90 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i-~~~~~~-~~~~~~~~~~l~~~~--~lv~~~~~~~~tG~~~p---i~~I~  162 (371)
T PF00266_consen   90 EVLVTSNEHPSNRYPWEEIAKRKGAEVRVI-PADPGG-SLDLEDLEEALNPDT--RLVSISHVENSTGVRNP---IEEIA  162 (371)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTTEEEEEE-EEGTTS-SCSHHHHHHHHHTTE--SEEEEESBETTTTBBSS---HHHHH
T ss_pred             ccccccccccccccccccccccchhhhccc-cccccc-hhhhhhhhhhhcccc--ceEEeecccccccEEee---eceeh
Confidence            99999999988773    334678999888 776655 679999999998665  99999999999999999   99999


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC------
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------  264 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~------  264 (400)
                      ++|+++|+++++|.+++..   ..+......+.+++++|.+|..|.+  .+|++..+   ++..++++......      
T Consensus       163 ~~~~~~~~~~~vD~~~~~g---~~~id~~~~~~D~~~~s~~Kl~gp~--G~g~l~v~---~~~~~~~~p~~~~~~~~~~~  234 (371)
T PF00266_consen  163 KLAHEYGALLVVDAAQSAG---CVPIDLDELGADFLVFSSHKLGGPP--GLGFLYVR---PEAIERLRPAKPGGGYLDFP  234 (371)
T ss_dssp             HHHHHTTSEEEEE-TTTTT---TSS--TTTTTESEEEEESTSTTSSS--TEEEEEEE---HHHHHHHHTSSSSSSTTTHH
T ss_pred             hhhhccCCceeEechhccc---cccccccccccceeeecccccCCCC--chhhheeh---hhhhhccccccccccccccc
Confidence            9999999999999999943   3344445567789999999943434  47999988   77888775432211      


Q ss_pred             ---------------CcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEe
Q 015768          265 ---------------PICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWA  324 (400)
Q Consensus       265 ---------------~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~  324 (400)
                                     ..+++.+...++..+++.. +...++..++..++.+++.+.|++++.+.+..+    ..+..+.+
T Consensus       235 ~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~  314 (371)
T PF00266_consen  235 SLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSF  314 (371)
T ss_dssp             HHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEE
T ss_pred             cchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEE
Confidence                           1256777777777777642 234567778889999999999999888666442    23455566


Q ss_pred             eCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHH
Q 015768          325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA  375 (400)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~  375 (400)
                      .++.  .+...+..+|. ++||.+..|..+.        ..+.+|+|++. +|++|++++
T Consensus       315 ~~~~--~~~~~~~~~L~-~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  315 NLPG--SDADDVVKYLE-ERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             EETT--SSHHHHHHHHH-HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             eecC--CCHHHHHHHHh-hcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence            6643  36788888776 5699999987765        35899999998 999998864

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PLN02242 methionine gamma-lyase

Probab=99.96  E-value=2.7e-26  Score=216.26  Aligned_cols=286  Identities=17%  Similarity=0.176  Sum_probs=202.2

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH-----HhcCcEEEEecc
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGP  142 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~-----~~~g~~~~~~~~  142 (400)
                      +...++++.++++.    |.  +.+++++|+++|+..++.+++++||+|+++.|.|.++...+     +..|++++.+ +
T Consensus        76 Pt~~~LE~~lA~l~----g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~-d  148 (418)
T PLN02242         76 PTVLNLGRQMAALE----GT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV-D  148 (418)
T ss_pred             hhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc-C
Confidence            34455555555554    53  56788999999999999999999999999999998876654     3468787766 4


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD  222 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  222 (400)
                      .+      |++.+++.++++ .+++|++++|+||||.+.+   +++|.++|++||+++|+|++|..+.+..     ...+
T Consensus       149 ~~------d~e~l~~~i~~~-~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~-----~~~g  213 (418)
T PLN02242        149 IT------DLEAVKKAVVPG-KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP-----ARLG  213 (418)
T ss_pred             CC------CHHHHHHhcCcC-CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH-----HHcC
Confidence            32      789999998764 1399999999999999998   8999999999999999999998654421     1224


Q ss_pred             cEEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      .+++++|+||.++.+|.+ +||++.+   +++++.+......  ...+.+...+.++..++.  .+.+..+++++.++++
T Consensus       214 ~divv~S~SK~l~g~g~~~gG~iv~~---~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~--l~tl~~r~~~~~~~a~  288 (418)
T PLN02242        214 ADVVVHSISKFISGGADIIAGAVCGP---AELVNSMMDLHHGALMLLGPTMNPKVAFELSER--LPHLSLRMKEHCRRAM  288 (418)
T ss_pred             CcEEEEeCccccCCCCCceEEEEEcC---HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHH
Confidence            679999999999877766 5999988   7888888766432  233444555566555554  2346677889999999


Q ss_pred             HHHHHhccCCCCcccCCC-------------------CceEEEeeCCCCCCCHHHHHHHHHHhc----CeEEeCCCccC-
Q 015768          300 IIREALSPLGEGAVKGGE-------------------GAIYLWARLPEKHLDDFEVVRWLAHRH----GVVVIPGGACG-  355 (400)
Q Consensus       300 ~l~~~L~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~----gi~v~~g~~~~-  355 (400)
                      .+.+.|++++. .+..|.                   .|-.+.+.+.. .....++++.+. -.    .+.+..|.... 
T Consensus       289 ~la~~L~~~~~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l~-~~~~~~~~~~slG~~~sl  365 (418)
T PLN02242        289 EYAKRMKELGL-KVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT-EERANRLMRYLQ-NSTQFGFMAVSLGYYETL  365 (418)
T ss_pred             HHHHHHHhCCC-EEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC-HHHHHHHHHHhh-cccccceeeecCCCCCce
Confidence            99999998864 443221                   23345556632 112344554442 11    22333333221 


Q ss_pred             ----------------------CCCeEEEEeccCCHH-HHHHHHHHHHHHHHHH
Q 015768          356 ----------------------CRGHLRISFGGLVED-DCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 ----------------------~~~~iRi~~~~~~~~-~~~~~~~~l~~~l~~~  386 (400)
                                            .++.+|||++.   | +.+++++.|++||..+
T Consensus       366 ~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~~dli~dl~~al~~~  416 (418)
T PLN02242        366 MSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY---TGTLEQRWSQFEKALSAM  416 (418)
T ss_pred             eeCCCccccccCCHHHHHhcCCCCCeEEEEecC---CCCHHHHHHHHHHHHHHh
Confidence                                  13579999997   5 4778899999999875

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.96  E-value=3.8e-26  Score=212.72  Aligned_cols=291  Identities=19%  Similarity=0.157  Sum_probs=210.4

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  142 (400)
                      .+....++++++++.    |  .+++++++|+++|+..++.++.++||+|+++.|+|.+....+    ...|++++.+ +
T Consensus        52 npt~~~Le~~lA~le----g--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v-d  124 (388)
T PRK08861         52 NPNRGLLEQTLSELE----S--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFV-D  124 (388)
T ss_pred             CchHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEE-C
Confidence            344566666666665    5  589999999999999999999999999999999998755433    3456787777 4


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD  222 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  222 (400)
                      .      .|++.+++.+++++  ++|++++|+||||.++|   +++|.++|+++|+++|+|++|....+..    ....+
T Consensus       125 ~------~d~e~l~~~i~~~t--klV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~~----pl~~G  189 (388)
T PRK08861        125 Q------SDAAALDAALAKKP--KLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQK----PLELG  189 (388)
T ss_pred             C------CCHHHHHHhcCcCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccCC----CcccC
Confidence            2      37889999887766  99999999999999999   7888999999999999999998654321    22346


Q ss_pred             cEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       223 ~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      .++++.|++|+++. .+...|+++.++  +++.+++...+......++++..+.+...|+.    +.-+++++.+++..+
T Consensus       190 aDivv~S~tK~l~G~~d~~gG~i~~~~--~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T----l~lR~~~~~~~a~~~  263 (388)
T PRK08861        190 ADFVIHSTTKYINGHSDVIGGVLITKT--KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT----LGARMRVHEESAQQI  263 (388)
T ss_pred             CCEEEeecceeccCCCcceeEEEEecH--HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC----HHHHHHHHHHHHHHH
Confidence            77999999999964 346789988764  67778787777666667788888877777776    677888999999999


Q ss_pred             HHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc----------
Q 015768          302 REALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----------  354 (400)
Q Consensus       302 ~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------  354 (400)
                      .+.|++++.+. |..|                ..+-.+.+.+........++++.| +=..+.+.-|...          
T Consensus       264 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l-~l~~~~~s~G~~~sl~~~p~~~~  342 (388)
T PRK08861        264 LAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKAL-ALFSLAESLGGVESLICHPASMT  342 (388)
T ss_pred             HHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcC-CcceEccCCCCCcceeeCCCccc
Confidence            99999887632 2222                123345566642111122333322 1112222222211          


Q ss_pred             ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                                  + .++.+|+|++.   |+.+++++.|+++++.+.+.
T Consensus       343 h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~Dl~~al~~~~~~  387 (388)
T PRK08861        343 HRAMGEEALAEAGVSQQLLRLSVGL---EDAQDLIADLDQAFAKAAEA  387 (388)
T ss_pred             ccccCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHhc
Confidence                        0 13579999997   67778899999999887764

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.96  E-value=1.5e-25  Score=209.42  Aligned_cols=325  Identities=15%  Similarity=0.142  Sum_probs=231.3

Q ss_pred             CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCc----HHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGL----PELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~----~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a  101 (400)
                      ++++++|++++ ..+..+|+++++..+++++...+.-+  ...|.    .++++++++++    |  .++.++++++..|
T Consensus       101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g--~e~all~sSGy~A  174 (476)
T PLN02955        101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K--KEDCLVCPTGFAA  174 (476)
T ss_pred             CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C--CCcEEEECChHHH
Confidence            35789998876 88889999999999988774322111  12344    45555555555    5  5678888999999


Q ss_pred             HHHHHHHh--------------cCCCCEEEEeCCCccchhHHHHhc----CcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768          102 FVNIVLTL--------------CDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (400)
Q Consensus       102 ~~~~~~~l--------------~~~gd~vlv~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~  163 (400)
                      +..++.+|              .+++|.|++..-.|.+..+.++..    +++++.+ +.+      |+++|++.++..+
T Consensus       175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f-~HN------D~~~Le~~L~~~~  247 (476)
T PLN02955        175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVY-RHC------DMYHLNSLLSSCK  247 (476)
T ss_pred             HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEe-CCC------CHHHHHHHHHhCC
Confidence            99999887              245678899999999999988776    5777777 432      8899999886322


Q ss_pred             -CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----ccccCCCcEEEEeccccccCCC
Q 015768          164 -TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCVEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       164 -~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~~~~~~i~~~s~sK~~g~~  237 (400)
                       ..++|++....++.|.+.|   +.+|.++|++||+++|+||+|+.+..+...     ......+.+++++|++|++|..
T Consensus       248 ~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~  324 (476)
T PLN02955        248 MKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH  324 (476)
T ss_pred             CCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc
Confidence             2356666667899999999   889999999999999999999987775421     1222357889999999999766


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcC--ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      |   |+++++   +++++.+........++  .+++...++.++++.... .+.++++++++.+++++.+   +. .+  
T Consensus       325 G---Gfi~gs---~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~-~~~~r~~L~~n~~~fr~~~---G~-~~--  391 (476)
T PLN02955        325 G---GFIACS---KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK-EKWRRKAIWERVKEFKALS---GV-DI--  391 (476)
T ss_pred             C---ceeecH---HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhc---CC-CC--
Confidence            6   999998   77888887655433333  344455555555553211 2356678888888888742   33 22  


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                        .+.++.+.+.... ...++.++|+ ++||++.+..++.-   ...+||+++. ++++|++.+++.|.++....
T Consensus       392 --~sPI~pI~ig~~~-~a~~~~~~L~-~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~  462 (476)
T PLN02955        392 --SSPIISLVVGNQE-KALKASRYLL-KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD  462 (476)
T ss_pred             --CCCEEEEEeCCHH-HHHHHHHHHH-HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence              1444444444321 3456677776 78999987766643   3479999988 99999999999998876554

>PLN00144 acetylornithine transaminase

Probab=99.96  E-value=7.1e-26  Score=212.14  Aligned_cols=338  Identities=17%  Similarity=0.140  Sum_probs=231.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+...  ++. ....+...++++.+.+..  +.+.+++++++++|++
T Consensus        12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~--~~~~v~f~~sGseA~e   86 (382)
T PLN00144         12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS--FADRVFFCNSGTEANE   86 (382)
T ss_pred             CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC--CCCeEEEeCCcHHHHH
Confidence            4678999998875  3453 789999999999876321  111 112344556677666543  3578999999999999


Q ss_pred             HHHHHhcC---------C------CCEEEEeCCCccchhHHHHhcCcEEE---EeccCCCCCC---CCCHHHHHHhhccC
Q 015768          104 NIVLTLCD---------A------GDSVVMFAPYYFNSYMSFQMTGVTHI---LVGPCSSKTL---HPDADWLEKTLETK  162 (400)
Q Consensus       104 ~~~~~l~~---------~------gd~vlv~~p~~~~~~~~~~~~g~~~~---~~~~~~~~~~---~~~~e~l~~~l~~~  162 (400)
                      .+++....         +      ..+|+....+|++.............   .+.|..++..   ..|++.+++.+..+
T Consensus        87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~  166 (382)
T PLN00144         87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG  166 (382)
T ss_pred             HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence            99997631         1      25799999999887754433221100   0001111100   12688999888643


Q ss_pred             CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCC
Q 015768          163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~  237 (400)
                       .+++|+++..+||.|.. .+.+.+++|.++|++||+++|+||++.++...+...    ....+|    +.++||.++ +
T Consensus       167 -~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD----i~t~sK~l~-~  240 (382)
T PLN00144        167 -KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD----IMTLAKPLA-G  240 (382)
T ss_pred             -CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC----EEEeccccc-C
Confidence             36888888668885553 466679999999999999999999999886655322    122233    668899997 8


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      |+++|+++.+   +++.+.+.......+++.+++.+.++.+.|+.-  .+...+..+.-....+.+.+.+.+.+.+.-+.
T Consensus       241 G~pig~v~~~---~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vr  317 (382)
T PLN00144        241 GLPIGAVLVT---EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVR  317 (382)
T ss_pred             CcceEEEEEc---HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeee
Confidence            9999999999   788887765556678889999999988655431  12222222222333444555555554422222


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      . .|+++|+.+..   ....+...+. ++||.+.|+.   ..+.+|++++. .+++++++++++|.+++.++
T Consensus       318 g-~G~~~~l~l~~---~~~~~~~~~~-~~Gv~i~~~~---~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~  381 (382)
T PLN00144        318 G-VGLLVGIQLDV---PAGPLVDACR-DSGLLVLTAG---KGDVVRLVPPLVISEAELEQAVEILADCLPAL  381 (382)
T ss_pred             c-CceEEEEEecC---ccHHHHHHHH-HCCeEEeecC---CCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence            3 58999999842   3567777665 8999998863   24899999998 89999999999999999764

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=5.4e-26  Score=199.95  Aligned_cols=353  Identities=22%  Similarity=0.228  Sum_probs=258.8

Q ss_pred             chHHHHHHHHHhcC--CCeEEcCCCC--CCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc--C
Q 015768           16 MPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--K   86 (400)
Q Consensus        16 ~~~~~~~~~~~~~~--~~~i~~~~~~--~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~--~   86 (400)
                      ......+.+.|..+  ++.|+++.|.  ...+   .-+.|.+|-...+.+.....|-+..|.+.+.+++++.+....  -
T Consensus        10 ~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~~   89 (396)
T COG1448          10 ADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPA   89 (396)
T ss_pred             CCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcHH
Confidence            33445556666443  5599999986  3332   234555555555555556789899999999999999874211  0


Q ss_pred             CCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768           87 LYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus        87 ~~~~~i--~~~~g~t~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      +..+++  +=|.|||.|+..+..-+.  .|..+|++++|+|+++..++...|.++..+.-.|..+..+|.+.+.+.|+.-
T Consensus        90 l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a  169 (396)
T COG1448          90 LAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA  169 (396)
T ss_pred             HHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC
Confidence            223343  447899999999998885  4667899999999999999999999998883345555568988888888744


Q ss_pred             CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc------cccCCCcEEEEeccccccC
Q 015768          163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH------CCVEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       163 ~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~------~~~~~~~~i~~~s~sK~~g  235 (400)
                      +...+|++- ++|||||.-++.+++.+|+++.++.+.+.++|-+|.+|..+...-      ........++..|+||.||
T Consensus       170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg  249 (396)
T COG1448         170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG  249 (396)
T ss_pred             CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence            333566665 569999999999999999999999999999999999887653211      1112334788999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHH----HHHhhccCCcCccHHHHHHHHHHhcCCc------HHHHHHHHHHHHHHHHHHHHh
Q 015768          236 MMGWRVGYIAYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      +-|-|+|.+..-..+++...+    +....+....+++..+...+...|...+      ..+..++.++.+++..|++.|
T Consensus       250 LYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L  329 (396)
T COG1448         250 LYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDAL  329 (396)
T ss_pred             hhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999984322211454444    3334444455677777777777777622      335778899999999999999


Q ss_pred             ccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          306 SPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       306 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +..+.   +..+..+.|||.+..+.     . +.+.+|.+++||++....        |+|++.+++..++..++.+.++
T Consensus       330 ~~~~~~~~f~~i~~Q~GMFsy~Gls-----~-~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v  395 (396)
T COG1448         330 KALGAPRNFDFIISQRGMFSYTGLS-----P-EQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             HhhCCCcccchHhhcCceeecCCCC-----H-HHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence            98432   45666777999987664     3 445668889999998655        9999998999999998888775

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.96  E-value=4.3e-26  Score=212.70  Aligned_cols=283  Identities=17%  Similarity=0.212  Sum_probs=202.4

Q ss_pred             CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCC
Q 015768           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCS  144 (400)
Q Consensus        69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~  144 (400)
                      ....+++.++++.    |.+.  .++++|+++++..++ .+.++||+|+++.|.|++...    .++..|++++.+ +. 
T Consensus        53 t~~~le~~la~l~----g~~~--~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~-  123 (366)
T PRK08247         53 TRGVLEQAIADLE----GGDQ--GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYV-NT-  123 (366)
T ss_pred             hHHHHHHHHHHHh----CCCc--EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEE-CC-
Confidence            3445555555554    6543  477888899999876 577899999999999988544    445689998888 54 


Q ss_pred             CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV  224 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  224 (400)
                           .|++.+++.+++++  ++|++++|+||+|...+   +++|.++|++||+++|+|++|.......    ....+.+
T Consensus       124 -----~d~~~l~~~i~~~t--klv~le~P~NP~~~~~d---l~~I~~la~~~g~~lIvD~t~~~~~~~~----p~~~g~d  189 (366)
T PRK08247        124 -----ASLKAIEQAITPNT--KAIFIETPTNPLMQETD---IAAIAKIAKKHGLLLIVDNTFYTPVLQR----PLEEGAD  189 (366)
T ss_pred             -----CCHHHHHHhcccCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccccC----chhcCCc
Confidence                 27889999988765  99999999999876655   9999999999999999999996433221    1234577


Q ss_pred             EEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768          225 VNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       225 i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  303 (400)
                      +++.|+||.++. ++++.|+++.++  +++.+++...+.......+++.++.+...++.    +..++++++++++.+.+
T Consensus       190 i~i~S~sK~~~g~~d~~~G~iv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----l~~r~~~~~~~a~~l~~  263 (366)
T PRK08247        190 IVIHSATKYLGGHNDVLAGLVVAKG--QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----LALRMRQHEENAKAIAA  263 (366)
T ss_pred             EEEeecceeccCCCceeeeEEecCh--HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc----HHHHHHHHHHHHHHHHH
Confidence            999999999963 356899999874  57777777666655566777777777777664    45667778999999999


Q ss_pred             HhccCCCCc-ccCC-CCceEEEeeCCCCCCCHHHHHHHH---------HHhcCeEEeCCCccC-------------CCCe
Q 015768          304 ALSPLGEGA-VKGG-EGAIYLWARLPEKHLDDFEVVRWL---------AHRHGVVVIPGGACG-------------CRGH  359 (400)
Q Consensus       304 ~L~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~gi~v~~g~~~~-------------~~~~  359 (400)
                      .|++++.+. +..| .++++.| .+.. .....++.+.+         .....+.+.|+..++             .++.
T Consensus       264 ~L~~~p~v~~v~~P~~gg~~sf-~~~~-~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~  341 (366)
T PRK08247        264 FLNEQPGVTDVLYPGRGGMLSF-RLQD-EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRL  341 (366)
T ss_pred             HHHhCCCeeEEecCCcCcEEEE-EECC-HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCe
Confidence            999987644 4444 6677666 5642 10112222211         112334555664331             1458


Q ss_pred             EEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          360 LRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       360 iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +|||++.   |+.+++++.|.+|+..
T Consensus       342 ~R~svGl---E~~~dl~~dl~~al~~  364 (366)
T PRK08247        342 LRFSVGI---ENVEDLIADLKQAFKQ  364 (366)
T ss_pred             EEEEecc---CCHHHHHHHHHHHHhh
Confidence            9999997   6777888889888875

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.96  E-value=9.1e-26  Score=213.94  Aligned_cols=346  Identities=13%  Similarity=0.099  Sum_probs=232.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....+.  ....+...++++.+.+.... ..+.++|++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~  114 (421)
T PRK06777         37 VEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQ--IVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAV  114 (421)
T ss_pred             CCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccccc--ccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHH
Confidence            5678899998875  3443 6899999999998874322221  11223345666666655432 246899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCcE-------------EEEeccCCCC--CC--CCCHHHHHHhhcc-
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGVT-------------HILVGPCSSK--TL--HPDADWLEKTLET-  161 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~--~~--~~~~e~l~~~l~~-  161 (400)
                      +.+++...  ....+|+....+|++....... .+..             +..+ |..+.  +.  ..+++.+++.+.. 
T Consensus       115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~l~~~~~~~  193 (421)
T PRK06777        115 ENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHA-LYPNELHGVSVEEALSSVERLFKAD  193 (421)
T ss_pred             HHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCccccCcCHHHHHHHHHHHHHhc
Confidence            99999764  2336799999999997754432 2210             1111 11111  00  1135667777752 


Q ss_pred             --CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          162 --KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       162 --~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                        ...+.+|+++..++..|. +++.+++++|.++|++||+++|+||+|.++...+........+....+.++||.++ +|
T Consensus       194 ~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~-~G  272 (421)
T PRK06777        194 IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLG-GG  272 (421)
T ss_pred             cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhc-CC
Confidence              233678888876888886 68999999999999999999999999998766553222111121111337899998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCccc
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVK  314 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~  314 (400)
                      +|+||++.+   +++++.+.......+++.+++.+.++.+.|+..++  ++..++.+++.+++++.|+++    +.+..+
T Consensus       273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v  347 (421)
T PRK06777        273 MPISAVVGR---AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLEKAKASCPAIVDI  347 (421)
T ss_pred             CceEEEEEc---HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence            999999998   78888776655667888999999999999974222  355666777777777777653    444445


Q ss_pred             CCCCceEEE-eeCCCCCCCH----HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLW-ARLPEKHLDD----FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       315 ~~~~~~~~~-~~~~~~~~~~----~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      .+.+.++.+ +..+....+.    ..+...++ ++||.+.|+..+  .+++||.+.. .+++++++++++|.+++.
T Consensus       348 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l~~~l~  420 (421)
T PRK06777        348 RARGSMVAVEFNDPQTGKPSPEFTRQYQRQAL-EEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNILTRLLA  420 (421)
T ss_pred             cCceEEEEEEEecCccCCccHHHHHHHHHHHH-hCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            666555543 3222111112    23333344 799999997654  3799999875 799999999999999874

>PRK07505 hypothetical protein; Provisional

Probab=99.95  E-value=3.7e-25  Score=209.88  Aligned_cols=332  Identities=16%  Similarity=0.151  Sum_probs=212.5

Q ss_pred             hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC-CCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-ISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~-~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||++.. ..+..+|++++++.+.+.+.. ....+ ......+..+++++.+.+..+.   +.++++++++|+.
T Consensus        43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~  119 (402)
T PRK07505         43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA---SVLTFTSCSAAHL  119 (402)
T ss_pred             cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC---CEEEECChHHHHH
Confidence            5578899997653 333678999999999887521 11111 1112244556666666666564   4555556678888


Q ss_pred             HHHHHhc----CCCC-EEEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768          104 NIVLTLC----DAGD-SVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus       104 ~~~~~l~----~~gd-~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                      .++..+.    .+|+ .|++.+..|++..   ......+.+++.+ |.      .|++.+++.+++++  +++++++|+|
T Consensus       120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~-~~------~d~~~l~~~~~~~~--~~~vl~~p~~  190 (402)
T PRK07505        120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETI-DH------NDLDALEDICKTNK--TVAYVADGVY  190 (402)
T ss_pred             HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEe-CC------CCHHHHHHHHhcCC--CEEEEEeccc
Confidence            8876543    2232 3556665554432   1222345677777 54      27889999887655  8899999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCC----cccc-CCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRK----HCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~----~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      |+|.+.+   +++|.++|++||+++|+||+|+...++  +..    .... .++.+++++|+||.+|.+|   ||++..+
T Consensus       191 ~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~  264 (402)
T PRK07505        191 SMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGD  264 (402)
T ss_pred             ccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC
Confidence            9999999   888889999999999999998643332  211    1122 3567899999999998665   8876543


Q ss_pred             CcHHHHHHHHHhhccCCc--CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee
Q 015768          249 EVEGFATQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR  325 (400)
Q Consensus       249 ~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  325 (400)
                        +++.+.+.......++  ++++++..++...++. ..+++.+..+.++++...+.+.+...    . .....++.++.
T Consensus       265 --~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~-~g~~~~i~~~~  337 (402)
T PRK07505        265 --AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----Q-SGSFLPIRLIY  337 (402)
T ss_pred             --HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----C-CCCCCCEEEEE
Confidence              7888888765554444  3455677777777662 12334444444544444433322111    1 11212333333


Q ss_pred             CCCCCCCHHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       326 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++.. ....++...|+ ++||.+.++..+.   .++++||+++. .+++++++++++|++++.+
T Consensus       338 ~~~~-~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~  399 (402)
T PRK07505        338 IGDE-DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE  399 (402)
T ss_pred             eCCH-HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence            3321 13567888776 7899999875443   23689999986 7999999999999998764

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.95  E-value=7.7e-26  Score=212.35  Aligned_cols=287  Identities=18%  Similarity=0.157  Sum_probs=203.4

Q ss_pred             CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEec
Q 015768           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (400)
Q Consensus        66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~  141 (400)
                      +.+....+++.++++.    |.  ++.+++++++.++..++.++.++||+|+++.|.|.+....+    +..|+++..+ 
T Consensus        59 ~~pt~~~Le~~lA~l~----G~--~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~-  131 (386)
T PRK06767         59 GNPTVKLFEERMAVLE----GG--EEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFC-  131 (386)
T ss_pred             CCcchHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEe-
Confidence            3444666777777766    53  34566677788999999999999999999999997766544    3346665555 


Q ss_pred             cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                      +.      .+++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|....... +   ...
T Consensus       132 ~~------~d~~~l~~~i~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~-p---l~~  196 (386)
T PRK06767        132 DM------ETEADIENKIRPNT--KLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQR-P---LEL  196 (386)
T ss_pred             CC------CCHHHHHHhhCcCc--eEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCC-c---hhc
Confidence            32      27889999887765  99999999999999999   8888999999999999999997443321 1   233


Q ss_pred             CcEEEEeccccccCCCcce-eEEEEccCCcHHHHHHH-HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQL-LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      +.++++.|++|.++.+|.+ .|+++++   ++.++++ ...+......++++.++++...|+.    +..++++.++++.
T Consensus       197 g~Div~~S~sK~l~g~g~~~gG~v~~~---~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t----l~~r~~~~~~~a~  269 (386)
T PRK06767        197 GCDAVVHSATKYIGGHGDVVAGVTICK---TRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT----LAVRMDRHCDNAE  269 (386)
T ss_pred             CCcEEEecCcceecCCCCceeEEEEeC---hHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHH
Confidence            5578899999999867777 4899888   5655554 3333322333466665655555543    5667788899999


Q ss_pred             HHHHHhccCCCCc-ccCC----------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-------------
Q 015768          300 IIREALSPLGEGA-VKGG----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-------------  355 (400)
Q Consensus       300 ~l~~~L~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-------------  355 (400)
                      .+.+.|++++.+. +..|          ..+..+.+.++....+..++.+.| +..++.+.-|....             
T Consensus       270 ~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~  348 (386)
T PRK06767        270 KIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDL-HFITIAVSLGDTETLIQHPATMTHAAI  348 (386)
T ss_pred             HHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhC-CccEEecCCCCcCccccCCCccccccC
Confidence            9999999988754 2222          123455666653222456777766 46777776664331             


Q ss_pred             ----------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          356 ----------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 ----------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                .++.+|||++.   |+.+++++.|.+++..
T Consensus       349 ~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~  385 (386)
T PRK06767        349 PAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK  385 (386)
T ss_pred             CHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                      13579999997   6677888888888864

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.95  E-value=5.1e-26  Score=216.14  Aligned_cols=347  Identities=12%  Similarity=0.043  Sum_probs=226.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+.....+.  ....+.+.++++.|.+... ...+.++|++++++|+
T Consensus        30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~  107 (420)
T TIGR00700        30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFM--VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAV  107 (420)
T ss_pred             CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccc--ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence            5688999998875  4443 6899999999998864322221  1122334456666655442 1236899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C--------c-----EEEEeccCCC--C--------CCCCCHHHHH
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G--------V-----THILVGPCSS--K--------TLHPDADWLE  156 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g--------~-----~~~~~~~~~~--~--------~~~~~~e~l~  156 (400)
                      +.+++...  ....+|+....+|++........ +        .     .+..+ |...  .        .++-+++.++
T Consensus       108 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  186 (420)
T TIGR00700       108 ENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRA-PLPYPYRDGLLDKQLSTDGELAAAR  186 (420)
T ss_pred             HHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccchhHHHHHHHHH
Confidence            99998764  23367999999998876443321 1        1     11112 2110  0        0001245666


Q ss_pred             Hhhc---cCCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccc
Q 015768          157 KTLE---TKPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSK  232 (400)
Q Consensus       157 ~~l~---~~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK  232 (400)
                      +.+.   ....+.+|+++..+..+|..+ +.+++++|.++|++||+++|+||+|.++...+........+....+.++||
T Consensus       187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK  266 (420)
T TIGR00700       187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAK  266 (420)
T ss_pred             HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeec
Confidence            6653   233468888886677788755 666699999999999999999999998876553222122222233456899


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      .++ +|+|+||++.+   +++.+.+.......+++.+++++.++.+.|+..  .+..++..+.-.+.++.+.+..+.++.
T Consensus       267 ~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~  342 (420)
T TIGR00700       267 SLA-DGLPLSGVTGR---AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPR  342 (420)
T ss_pred             ccc-CCcceEEEEec---HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            998 89999999999   788887765556678889999999997777631  122222222223334444443344454


Q ss_pred             CcccCCCCceEEEeeCCCC--CC-C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          311 GAVKGGEGAIYLWARLPEK--HL-D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +..+.+. |.+.++.+...  .. +   ...+...+ .++||.+.|+..|  .+++||+++. .+++++++++++|.+++
T Consensus       343 ~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l~~~l  418 (420)
T TIGR00700       343 IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDILCAIL  418 (420)
T ss_pred             EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence            4445555 77777766321  00 1   23444444 4899999998765  3799999876 79999999999999987


Q ss_pred             H
Q 015768          384 E  384 (400)
Q Consensus       384 ~  384 (400)
                      .
T Consensus       419 ~  419 (420)
T TIGR00700       419 A  419 (420)
T ss_pred             h
Confidence            4

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.95  E-value=1.2e-25  Score=211.33  Aligned_cols=292  Identities=22%  Similarity=0.155  Sum_probs=200.5

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~  143 (400)
                      .+.+...+.+++.+++..|. .+ .++++++++++..++.++.++||+|+++.|+|.+..    ..++..|.+++.+ +.
T Consensus        56 R~~~p~~~~Le~~lA~l~g~-~~-~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v-~~  132 (405)
T PRK08776         56 RSGNPTRDLLGEALAELEGG-AG-GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA-DL  132 (405)
T ss_pred             CCCChHHHHHHHHHHHHhCC-Cc-eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE-CC
Confidence            33344445555555555564 23 456666789999999999999999999999998743    3345567888877 53


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                            .|.+.+++.+++++  |+|++++|+||+|.+.+   +++|.++|+++|+++|+|++|.....    ......+.
T Consensus       133 ------~d~~~l~~~i~~~t--klV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~----~~pl~~ga  197 (405)
T PRK08776        133 ------TDPRSLADALAQSP--KLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL----QKPLEFGA  197 (405)
T ss_pred             ------CCHHHHHHhcCcCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc----CCcccccC
Confidence                  27888999887655  99999999999999988   89999999999999999999975322    11223455


Q ss_pred             EEEEeccccccCCC-cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g~~-g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++++.|.+|.++.+ ++..|+++.++  +++.+++..........++++..+++...+    ++++.+++++.+++..+.
T Consensus       198 Divv~S~tK~l~g~~~~~~G~vv~~~--~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl----~tl~~r~~~~~~na~~la  271 (405)
T PRK08776        198 DLVLHSTTKYINGHSDVVGGAVVARD--AELHQQLVWWANALGLTGSPFDAFLTLRGL----RTLDARLRVHQENADAIA  271 (405)
T ss_pred             CEEEecCceeecCCCCceEEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhh----CcHHHHHHHHHHHHHHHH
Confidence            69999999999644 56789988765  678888876665555567777777766555    457888999999999999


Q ss_pred             HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768          303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----------  354 (400)
Q Consensus       303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----------  354 (400)
                      +.|++++.+. +..|                ..+-.+.+.+........++++.|. =..+.+.-|...           
T Consensus       272 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-l~~~~~s~G~~~sl~~~p~~~~h  350 (405)
T PRK08776        272 ALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLR-YFTLAESLGGVESLIAHPASMTH  350 (405)
T ss_pred             HHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCC-cceEccCCCCCceEEECCccccc
Confidence            9999887532 2111                1234555666532111223333321 111122222211           


Q ss_pred             -----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          355 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       355 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                                 + .++.+|||++.   |+.+++++.|++++....
T Consensus       351 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~~~  392 (405)
T PRK08776        351 AAMTAEARAAAGISDGLLRLSVGI---ESAEDLLIDLRAGLARAE  392 (405)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhH
Confidence                       0 13579999997   566677777777777643

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.95  E-value=8.7e-26  Score=211.05  Aligned_cols=289  Identities=22%  Similarity=0.185  Sum_probs=207.6

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |.  +++++++|+++++..++.++.++||+|+++.|+|++....+.    ..|.++..+ + 
T Consensus        52 pt~~~L~~~lA~l~----g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~v-d-  123 (386)
T PRK08045         52 PTRDVVQRALAELE----GG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-D-  123 (386)
T ss_pred             ccHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEe-C-
Confidence            34556666666654    53  469999999999999999999999999999999987554433    234466555 3 


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                           ..|++.+++.+++++  ++|++++|+||||.++|   +++|.++|+++|+++|+|++|..+....    ....+.
T Consensus       124 -----~~d~e~l~~~l~~~t--klV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~~----pl~~ga  189 (386)
T PRK08045        124 -----QGDEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQN----PLALGA  189 (386)
T ss_pred             -----CCCHHHHHHhcccCC--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCC----chhhCC
Confidence                 247889999887765  99999999999999999   8888889999999999999998654321    223345


Q ss_pred             EEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++++.|++|+++ .++...|+++..+  +++.+++.........+.+++.++.+...|+.    +..+++++.+++..+.
T Consensus       190 Divv~S~tK~l~G~~d~~~G~vi~~~--~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t----l~~R~~~~~~na~~la  263 (386)
T PRK08045        190 DLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAIV  263 (386)
T ss_pred             CEEEeecceeccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----HHHHHHHHHHHHHHHH
Confidence            699999999995 4567789987754  67888887666666777899999988888876    6788899999999999


Q ss_pred             HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768          303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----------  354 (400)
Q Consensus       303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----------  354 (400)
                      +.|++++.+. +..|                ..|-.+.+.+........++++.| +=..+.+.-|...           
T Consensus       264 ~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~  342 (386)
T PRK08045        264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGL-SLFTLAESLGGVESLISHAATMTH  342 (386)
T ss_pred             HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhc-cceeEeccCCCCceeEeCCCCccc
Confidence            9999887632 2211                113345556643211123344433 1122222222211           


Q ss_pred             -----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          355 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       355 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                                 + .++.+|+|++.   |+.+++++.|.++++...+
T Consensus       343 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~~  385 (386)
T PRK08045        343 AGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAANK  385 (386)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhhc
Confidence                       0 14689999997   6677888889998886543

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.95  E-value=5.2e-26  Score=217.15  Aligned_cols=336  Identities=20%  Similarity=0.175  Sum_probs=228.3

Q ss_pred             hcCCCeEEcCCCCCC--C-CCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGVVY--W-QPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~--~-~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..|...  + ..+|++++++.+.+.+..  .|. +..+..++++++++++.     ..+++++++|+++|+
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~-----~~~~v~~~~sGseA~  117 (423)
T TIGR00713        45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVP-----SVEMVRFVNSGTEAT  117 (423)
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCC-----cccEEEEeCCHHHHH
Confidence            457889999888633  3 378999999999998753  233 44456677777777652     136899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHh---cCcEEEEeccCCC---C-----CC---CCCHHHHHHhhccC-CCC
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM---TGVTHILVGPCSS---K-----TL---HPDADWLEKTLETK-PTP  165 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~---~-----~~---~~~~e~l~~~l~~~-~~~  165 (400)
                      +.+++...  ...++|+...++|+++...+..   .+...... |..+   .     ..   ..|++++++.+... ..+
T Consensus       118 e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~  196 (423)
T TIGR00713       118 MSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGL-PTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEI  196 (423)
T ss_pred             HHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCC-CCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcE
Confidence            99998754  2458999999999997643332   11111111 1100   0     00   01788999888632 235


Q ss_pred             eEEEEe-CCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccCCCcEEEEeccccccCCCcce
Q 015768          166 KLVSVV-NPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       166 ~~v~l~-~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~~  240 (400)
                      ++|+++ .++| +|.+.+ .+++++|.++|++||+++|+||+|.++..+...   .....+  +  +.++||.++ +|+|
T Consensus       197 aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~p--D--i~t~sK~l~-~G~p  270 (423)
T TIGR00713       197 AGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEP--D--LTTLGKIIG-GGLP  270 (423)
T ss_pred             EEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCc--c--hhhhhhhhc-CCCc
Confidence            788887 5667 788776 689999999999999999999999877543211   111122  2  347999998 8999


Q ss_pred             eEEEEccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          241 VGYIAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      +||++++   +++++.+..   .....+++.+++.+.++.++|+..  .++..+..+....+++.+.+.+++++......
T Consensus       271 ig~v~~~---~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~  347 (423)
T TIGR00713       271 VGAFGGR---REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVN  347 (423)
T ss_pred             eeeeeEH---HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            9999999   788888763   223457788999999988888742  23455666666666777777777776532233


Q ss_pred             CCCceE-EEeeCCCCC-------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          316 GEGAIY-LWARLPEKH-------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       316 ~~~~~~-~~~~~~~~~-------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ..+.++ +++..+...       .+   ...++..++ ++||.+.++.    .+.+|+++. .+++++++++++|.+++.
T Consensus       348 ~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~l~~~-~t~~~i~~~~~~l~~~l~  421 (423)
T TIGR00713       348 RVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ----FEACFLSAA-HTEEDIENTIEAAEEVFA  421 (423)
T ss_pred             eeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC----ccceeeECC-CCHHHHHHHHHHHHHHHh
Confidence            333333 223322110       01   225666776 6899987542    246899987 499999999999999987


Q ss_pred             H
Q 015768          385 E  385 (400)
Q Consensus       385 ~  385 (400)
                      +
T Consensus       422 ~  422 (423)
T TIGR00713       422 E  422 (423)
T ss_pred             h
Confidence            5

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.95  E-value=1e-25  Score=210.71  Aligned_cols=281  Identities=22%  Similarity=0.212  Sum_probs=203.2

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |.  ++.++++++++|+..++.++.++||+|+++.++|.+....    ++..|+++..+ +.
T Consensus        40 p~~~~le~~la~l~----g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~  112 (369)
T cd00614          40 PTVDALEKKLAALE----GG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV-DP  112 (369)
T ss_pred             hhHHHHHHHHHHHH----CC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe-CC
Confidence            34455555555554    53  5678888899999999999999999999999999887654    34678888887 54


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                      +      +++.+++.+++++  ++|++++|+||+|.+.|   +++|.++|+++|+++|+|++|+.....    .....+.
T Consensus       113 ~------d~~~l~~~i~~~~--~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~~~g~  177 (369)
T cd00614         113 D------DPEALEAAIKPET--KLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPLELGA  177 (369)
T ss_pred             C------CHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----ChhhhCC
Confidence            3      5888999887655  99999999999999999   889999999999999999999865431    1223456


Q ss_pred             EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++++.|++|.+|.+| .+.|++++++  +++++++..........++++..+++...++.    +..+++++.+++..+.
T Consensus       178 Divv~S~tK~l~g~~~~~gG~v~~~~--~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t----l~~r~~~~~~na~~la  251 (369)
T cd00614         178 DIVVHSATKYIGGHSDVIAGVVVGSG--EALIQRLRFLRLALGTILSPFDAWLLLRGLKT----LPLRMERHSENALKVA  251 (369)
T ss_pred             cEEEeccceeccCCCCceEEEEEeCc--HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC----HHHHHHHHHHHHHHHH
Confidence            799999999997554 7899999874  47888888766655666777777776666654    5667888899999999


Q ss_pred             HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc--------
Q 015768          303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC--------  354 (400)
Q Consensus       303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~--------  354 (400)
                      +.|++++.+. +..|                ..+.++.+.+..   +.++.. .+++.-.+.   +.-|...        
T Consensus       252 ~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~---~~~~~~-~f~~~l~~~~~~~s~G~~~sl~~~~~~  327 (369)
T cd00614         252 EFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG---GLEAAK-KFLNALKLFSLAVSLGGVESLVEHPAS  327 (369)
T ss_pred             HHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC---CHHHHH-HHHHcCCcceEcccCCCCceeeeCCcc
Confidence            9999887532 2222                135666667752   222222 233333333   1112111        


Q ss_pred             --------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          355 --------------G-CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       355 --------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                                    + .++.+|+|++.   |+.+++++.|.+++
T Consensus       328 ~~~~~~~~~~~~~~g~~~~liR~svGl---E~~~dl~~dl~~al  368 (369)
T cd00614         328 MTHSQLPPEERAAAGITPGLVRLSVGI---EDVEDLIADLEQAL  368 (369)
T ss_pred             cccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence                          0 14589999997   66777888888776

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.95  E-value=2.8e-25  Score=210.64  Aligned_cols=344  Identities=13%  Similarity=0.122  Sum_probs=230.7

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....+.  ....+...++++.+.+.... ..+.++|++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~  114 (421)
T PRK09792         37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQ--IVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAV  114 (421)
T ss_pred             CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccC--ccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHH
Confidence            5678899998775  3343 7899999999998864322221  11234445666666655432 236899999999999


Q ss_pred             HHHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCC--CCCCC--CCHHHHHHhhcc-
Q 015768          103 VNIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCS--SKTLH--PDADWLEKTLET-  161 (400)
Q Consensus       103 ~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~--~~~~~--~~~e~l~~~l~~-  161 (400)
                      +.+++....  ...+|+....+|++....... .|.             .++.+ |..  ..+..  -+++.+++.+.. 
T Consensus       115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~~~~~~~l~~~~~~~  193 (421)
T PRK09792        115 ENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHV-PYPSDLHGISTQDSLDAIERLFKSD  193 (421)
T ss_pred             HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHhc
Confidence            999998752  236899999999887633322 121             11222 221  11110  134778877762 


Q ss_pred             --CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          162 --KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       162 --~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                        ...+++|+++..++++|... |.+++++|.++|++||+++|+||++.++...+........+...-+.+++|.++ +|
T Consensus       194 ~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~-~G  272 (421)
T PRK09792        194 IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLA-GG  272 (421)
T ss_pred             cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhc-CC
Confidence              23468888887789999865 899999999999999999999999998876554322111111122568899998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCccc
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVK  314 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~  314 (400)
                      +++||++.+   +++.+.+.......+++.+++.+.++.+.++..++  .+..++.++..+++.+.|+.    ++.  +.
T Consensus       273 ~pigav~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~~l~~~~p~--v~  345 (421)
T PRK09792        273 MPLSGVVGN---ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK--ESLCERANQLGQRLKNTLIDAKESVPA--IA  345 (421)
T ss_pred             CceEEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHhCCC--cc
Confidence            999999998   78877776555567888999999977777664211  12333344444444444433    443  33


Q ss_pred             CCCC-ceEEEeeCCCCC------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          315 GGEG-AIYLWARLPEKH------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       315 ~~~~-~~~~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      .+.+ |.++|+.+++..      .....+...++ ++||.+.+...  .++.+||.++. ++++++++++++|.+++.
T Consensus       346 ~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~~~l~~~l~  420 (421)
T PRK09792        346 AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL-AQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQDALS  420 (421)
T ss_pred             eecccceEEEEEecCCccCCcchHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence            4444 899999986431      12355666665 79999964221  25899999888 899999999999999885

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.95  E-value=2.4e-25  Score=213.07  Aligned_cols=351  Identities=12%  Similarity=0.117  Sum_probs=225.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|.+.+++.+.+.+......  .....+...++++.|.+..... .+.++++++|++|+
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~  128 (451)
T PRK06918         51 VDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAV  128 (451)
T ss_pred             CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHH
Confidence            4578899998875  3343 789999999999886422111  1112345567777776654322 26899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-Cc-------------EEEEeccCC-----CCCCCC------CHHHH
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCS-----SKTLHP------DADWL  155 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~-----~~~~~~------~~e~l  155 (400)
                      +.+++...  ....+|+....+|++........ +.             .+..+ |..     +.+...      .++.+
T Consensus       129 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  207 (451)
T PRK06918        129 ENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKA-PFPYEYRRPEGLTEEQYDDFMIEEF  207 (451)
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEc-CCCccccccccCchHHHHHHHHHHH
Confidence            99999764  23367999999999877544322 11             11222 211     011000      02234


Q ss_pred             HHhhc---cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768          156 EKTLE---TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS  231 (400)
Q Consensus       156 ~~~l~---~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s  231 (400)
                      ++.+.   ....+.+|+++..+...|. ..+.+++++|.++|++||+++|+||+|.++...+........+....+.++|
T Consensus       208 ~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~s  287 (451)
T PRK06918        208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVS  287 (451)
T ss_pred             HHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeee
Confidence            44332   1223577777655555676 4566779999999999999999999999887655322111122112255899


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc----c
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----P  307 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~  307 (400)
                      |.++ +|+|+||++.+   +++.+.+.......+++.+++.+.++.+.|+...+  ....++.++..+++.+.|+    +
T Consensus       288 K~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~l~~~  361 (451)
T PRK06918        288 KSLG-AGVPISGVIGR---KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEK--ENLNDRAIELGKVVMNRFEEMKNK  361 (451)
T ss_pred             hhhc-CCCccEEEEEc---HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHhh
Confidence            9998 89999999998   78888776555667888999999997777763211  1222233333344444443    3


Q ss_pred             CCCCcccCCCCceEEEeeCCCC--CC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          308 LGEGAVKGGEGAIYLWARLPEK--HL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                      ++.+..+.+.++++.|....+.  ..    ....+...+ .++||.+.|+..|  .+++|++++. .+++++++++++|.
T Consensus       362 ~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l~  438 (451)
T PRK06918        362 YNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTIIE  438 (451)
T ss_pred             CCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHHH
Confidence            3433334456566666543110  00    133455544 4899999997654  3789999986 79999999999999


Q ss_pred             HHHHHHhcc
Q 015768          381 RGLEELVKD  389 (400)
Q Consensus       381 ~~l~~~~~~  389 (400)
                      ++++++.++
T Consensus       439 ~~l~~~~~~  447 (451)
T PRK06918        439 ESLQACYEK  447 (451)
T ss_pred             HHHHHHHHh
Confidence            999988654

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.95  E-value=1.9e-26  Score=215.27  Aligned_cols=310  Identities=17%  Similarity=0.155  Sum_probs=215.7

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCC--CCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc----CCC-
Q 015768           43 QPPKMAMEKVKELVWDPSISKYG--ADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAG-  113 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~--~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~----~~g-  113 (400)
                      ++|+.+++++.+.+.........  ...+  ...+.+.+.+.+++.+|+++++|++++|+|++++.++.++.    ++| 
T Consensus         9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~   88 (353)
T TIGR03235         9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK   88 (353)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence            56799999998887532111110  0001  11334555566666668888999999999999999998885    356 


Q ss_pred             CEEEEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          114 DSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       114 d~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      +.|++....|+++...   ++..|++++.+ +.+++ +.+|++++++.+++++  ++|++++++||||.+.|   +++|.
T Consensus        89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~---~~~I~  161 (353)
T TIGR03235        89 KHIITSAIEHPAVLEPIRALERNGFTVTYL-PVDES-GRIDVDELADAIRPDT--LLVSIMHVNNETGSIQP---IREIA  161 (353)
T ss_pred             CeeeEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhCCCCC--EEEEEEcccCCceeccC---HHHHH
Confidence            7898888888776544   45579999999 87754 4689999999997655  99999999999999999   89999


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH--HHHh-------h
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--LLKV-------Q  261 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~--l~~~-------~  261 (400)
                      ++|+++|+++++|++++....   +......+.++++.|++|++|.+|  +|+++.++   +....  +...       .
T Consensus       162 ~l~~~~~~~~ivD~a~~~g~~---~~~~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~---~~~~~~~~~~~~~~~~~~~  233 (353)
T TIGR03235       162 EVLEAHEAFFHVDAAQVVGKI---TVDLSADRIDLISCSGHKIYGPKG--IGALVIRK---RGKPKAPLKPIMFGGGQER  233 (353)
T ss_pred             HHHHHcCCEEEEEchhhcCCc---cccccccCCCEEEeehhhcCCCCc--eEEEEEcc---CcccccccCceeeCCCCcC
Confidence            999999999999999884332   233334567899999999876444  78888774   22111  1110       0


Q ss_pred             ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCCHHHHHH
Q 015768          262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVR  338 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  338 (400)
                      .....+++.....++..+++...+..++..++++++.+.+++.|++.+. ++..+..   ..++.+.++.  .+.+++..
T Consensus       234 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~~~--~~~~~v~~  310 (353)
T TIGR03235       234 GLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGV-KLNGDPAETIPHILNFSIDG--VNSEALIV  310 (353)
T ss_pred             ccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCe-EEeCCcccccCCEEEEEeCC--cCHHHHHH
Confidence            1123456667777777777643344577788899999999999988543 5443221   2234445543  35777877


Q ss_pred             HHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHH
Q 015768          339 WLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCK  373 (400)
Q Consensus       339 ~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~  373 (400)
                      .| ++ +|.+.+|..|..    +.++|.+++. +++.+.
T Consensus       311 ~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~-~~~~~~  346 (353)
T TIGR03235       311 NL-RA-DAAVSTGSACSSSKYEPSHVLQAMGL-DTDRAR  346 (353)
T ss_pred             HH-hC-CeEEEchhhcCCCCCCCCHHHHHcCC-CHHHhC
Confidence            77 34 899999998853    3378888886 555443

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.95  E-value=1.3e-25  Score=210.77  Aligned_cols=287  Identities=17%  Similarity=0.139  Sum_probs=202.2

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |.  ++.++++++++|+..++.++.++||+|+++.|+|.+...    .++..|+++..+ +.
T Consensus        64 p~~~~le~~lA~l~----g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v-d~  136 (398)
T PRK08249         64 PTVQAFEEKVRILE----GA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC-ET  136 (398)
T ss_pred             hHHHHHHHHHHHHh----CC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc-CC
Confidence            34455666666655    53  456777888899999999999999999999999987654    345678888777 42


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                            .|++.+++.+++++  ++|++++|+||+|.+.|   +.+|.++|+++|+++|+|++|..+....    ....+.
T Consensus       137 ------~d~e~l~~~i~~~t--klV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~l~~~~  201 (398)
T PRK08249        137 ------GDHEQIEAEIAKGC--DLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----PLALGA  201 (398)
T ss_pred             ------CCHHHHHHhcCCCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----chhhCC
Confidence                  37899999998766  99999999999999999   8889999999999999999998654322    122345


Q ss_pred             EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++++.|+||++|.+|.++ |+++.+   +++++++...+.......++..++.+...++.    +..++++..+++..+.
T Consensus       202 Divv~S~sK~l~g~~~~~gG~vv~~---~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t----L~~R~~~~~~na~~la  274 (398)
T PRK08249        202 DLVIHSATKFLSGHADALGGVVCGS---KELMEQVYHYREINGATMDPMSAYLILRGMKT----LKLRVRQQQESAMALA  274 (398)
T ss_pred             CEEeccCceecCCCCCceEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch----HHHHHHHHHHHHHHHH
Confidence            688999999997556554 777766   78888888777655666777777776666654    5677788889999999


Q ss_pred             HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768          303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----------  354 (400)
Q Consensus       303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----------  354 (400)
                      +.|++++.+. +..|                ..|-.+.+.+........+++..| +=..+.+.-|...           
T Consensus       275 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l-~l~~~~~s~G~~~sl~~~~~~~~~  353 (398)
T PRK08249        275 KYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKL-RYAHRAANLGAVETIYGPARTTSH  353 (398)
T ss_pred             HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhC-CcceEccCCCCCCceeeCCccccc
Confidence            9999877532 2211                123445556643211122333322 1111222222211           


Q ss_pred             -----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          355 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       355 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                                 + .++.+|||++.   |+.+++++.|.+++....
T Consensus       354 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~  395 (398)
T PRK08249        354 VENTLEERAALGIPEGLVRISVGI---EDTEDLIADLEQAFAHLE  395 (398)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHhh
Confidence                       0 13579999997   677788888888888644

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.95  E-value=1.3e-25  Score=210.82  Aligned_cols=279  Identities=19%  Similarity=0.214  Sum_probs=194.1

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~  145 (400)
                      ...+++.++++    +|.  +++++++|+++|+..++.++.++||+|+++.+.|.+...    .++..|++++++ +.+ 
T Consensus        63 ~~~le~~la~l----~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~-  134 (390)
T PRK08133         63 VTMFQERLAAL----EGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFV-DLT-  134 (390)
T ss_pred             HHHHHHHHHHH----hCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEE-CCC-
Confidence            44455555554    464  568899999999999999999999999999999977654    456789999888 653 


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                           +.+.+++.+++++  |+|++++|+||+|.+.+   +++|.++|+++|+++|+|+++.......    ....+.++
T Consensus       135 -----d~~~l~~~i~~~t--klV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~----pl~~g~Di  200 (390)
T PRK08133        135 -----DLDAWRAAVRPNT--KLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ----PLKLGADV  200 (390)
T ss_pred             -----CHHHHHHhcCcCC--eEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC----chhhCCcE
Confidence                 6888999998766  99999999999999999   8999999999999999999987544322    12334578


Q ss_pred             EEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ++.|+||+++.+|.++ |+++.+   ++.++++..........+++..++.+...+    +.+..+.+++.+++..+.+.
T Consensus       201 vv~S~sK~~~g~g~~~GG~vv~~---~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl----~tl~~R~~~~~~~a~~la~~  273 (390)
T PRK08133        201 VIHSATKYLDGQGRVLGGAVVGS---KELMEEVFGFLRTAGPTLSPFNAWVFLKGL----ETLSLRMEAHSANALALAEW  273 (390)
T ss_pred             EEeecceeecCCcceEeEEEEcC---HHHHHHHHHHHHHhCCCCCHHHHHHHHccc----chHHHHHHHHHHHHHHHHHH
Confidence            8999999998778776 566666   566666655444444455555555444333    34677788888899999999


Q ss_pred             hccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc----------
Q 015768          305 LSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC----------  354 (400)
Q Consensus       305 L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~----------  354 (400)
                      |++++.+. +..|                ..+-.+.+.+..   +.++ +..+++.-.++   +.-|..-          
T Consensus       274 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~---~~~~-~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~  349 (390)
T PRK08133        274 LEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG---GREA-AWRVIDATRLISITANLGDTKTTITHPATTT  349 (390)
T ss_pred             HHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC---CHHH-HHHHHHhCCcceEeccCCCcceeeecCCCCC
Confidence            99876532 1111                123455566642   1222 22233333332   2211000          


Q ss_pred             ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                                  + .++.+|+|++.   |+.+++++.|.++|.
T Consensus       350 ~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~  389 (390)
T PRK08133        350 HGRLSPEARAAAGITEGLIRVAVGL---EDVADIKADLARGLA  389 (390)
T ss_pred             cccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHhh
Confidence                        0 14689999997   667788888888875

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.95  E-value=3.1e-25  Score=206.31  Aligned_cols=293  Identities=16%  Similarity=0.131  Sum_probs=208.2

Q ss_pred             CCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcE
Q 015768           63 KYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVT  136 (400)
Q Consensus        63 ~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~  136 (400)
                      .|+.  .+....++++++++.    +  .+++++++|+++|+..++.+++++||+|++++|.|.++...    ++..|++
T Consensus        54 ~Y~r~~npt~~~Le~~iA~le----~--~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~  127 (394)
T PRK09028         54 FYGRRGTPTHFAFQAAIVELE----G--GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIE  127 (394)
T ss_pred             eecCCCCchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceE
Confidence            3543  344567888888764    3  35789999999999999999999999999999999887753    3567888


Q ss_pred             EEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc
Q 015768          137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH  216 (400)
Q Consensus       137 ~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~  216 (400)
                      +..+ +.+      +.+.+++.+.+++  |+|++++|+||+|.+.+   +++|+++|+++|+++++|++|+...    ..
T Consensus       128 v~~v-~~~------~~e~l~~~l~~~T--klV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~p~----~~  191 (394)
T PRK09028        128 TTYY-DPM------IGEGIRELIRPNT--KVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWASPI----NS  191 (394)
T ss_pred             EEEE-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCccccc----cC
Confidence            8777 322      4577888887766  99999999999999887   9999999999999999999998532    12


Q ss_pred             cccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 015768          217 CCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV  295 (400)
Q Consensus       217 ~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  295 (400)
                      .+...+.++++.|.+|+++ .++.-.|+++.+   +++.+++..........+++...+.+...|+.    +.-+++++.
T Consensus       192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~  264 (394)
T PRK09028        192 RPFEMGVDISIQAATKYIVGHSDVMLGTATAN---EKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT----LGVRLAQHE  264 (394)
T ss_pred             CccccCceEEEEeCCeEecCCCCEEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHH
Confidence            3345678899999999994 345777877765   66767676555545566788887777777765    678889999


Q ss_pred             HHHHHHHHHhccCCCC-cccCC----------------CCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccC--
Q 015768          296 RNREIIREALSPLGEG-AVKGG----------------EGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACG--  355 (400)
Q Consensus       296 ~~~~~l~~~L~~~~~~-~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~--  355 (400)
                      +++..+.+.|++++.+ ++..|                ..+-.+.+.+.... ....++++.| +=..+.+.-|....  
T Consensus       265 ~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l-~l~~~~~slG~~~sLv  343 (394)
T PRK09028        265 KNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGM-QHFKMGFSWGGFESLI  343 (394)
T ss_pred             HHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC-CcceEecccCCCccee
Confidence            9999999999998763 23222                12345556665211 1122333332 11122222221110  


Q ss_pred             -----------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          356 -----------------CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       356 -----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                                       .++.+|||++.   |+.+++++.|.+++..+..
T Consensus       344 ~~p~~~~~~~~~~~~~~~~~liR~svGl---Ed~~dLi~Dl~~Al~~~~~  390 (394)
T PRK09028        344 LGVFGINKLRTATNWDFSKPLIRLHIGL---EDVDDLIADLEAGFERYNA  390 (394)
T ss_pred             ECCCCcCccCchhhhcCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHH
Confidence                             12579999997   5677788888888876643

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.95  E-value=2e-25  Score=209.92  Aligned_cols=287  Identities=21%  Similarity=0.220  Sum_probs=199.5

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  142 (400)
                      .+....+++.++++.    |.+.  .+++++++.++..++.++.++||+|+++.+.|.++...+    +..|++++.+ +
T Consensus        64 ~p~~~~Le~~lA~l~----G~~~--~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-d  136 (398)
T PRK07504         64 NPTVDMFEKRMCALE----GAED--ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV-D  136 (398)
T ss_pred             CchHHHHHHHHHHHh----CCCe--eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEE-C
Confidence            344566777777665    6543  345778889999888888999999999999998765443    4578888887 4


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD  222 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  222 (400)
                            ..|++.+++.+++++  |+|++++|+||+|.+.|   +++|.++|+++|+++|+|++|..+.+..    ....+
T Consensus       137 ------~~d~e~l~~ai~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~----~~~~g  201 (398)
T PRK07504        137 ------GLDLDNWEKAVRPNT--KVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK----PLELG  201 (398)
T ss_pred             ------CCCHHHHHHhcCcCc--eEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC----chhhC
Confidence                  258999999998766  99999999999999999   8899999999999999999998654421    22335


Q ss_pred             cEEEEeccccccCCCcceeE-EEEccCCcHHHH-HHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFA-TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      .++++.|++|+++.+|.++| +++++   ++.+ +.+..........++++..+.+...|+.    +..+.++..+++..
T Consensus       202 aDivv~S~sK~l~g~g~~~GG~vv~~---~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t----l~~R~~~~~~na~~  274 (398)
T PRK07504        202 AHIVVYSATKHIDGQGRCLGGVVLSD---KAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET----LPVRVRQQTESAAA  274 (398)
T ss_pred             CCEEEeeccccccCCccceEEEEEeC---cHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHH
Confidence            67899999999987888875 56666   3443 3454433334455677766666666654    67778888899999


Q ss_pred             HHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc---------
Q 015768          301 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC---------  354 (400)
Q Consensus       301 l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~---------  354 (400)
                      +.+.|++++.+. +..|                ..+..+.+.+........++++.| +=..+.+.-|...         
T Consensus       275 la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l-~~~~~~~slG~~~sl~~~p~~~  353 (398)
T PRK07504        275 IADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNAL-KIVRISNNLGDAKSLITHPATT  353 (398)
T ss_pred             HHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhC-CcceecccCCCCCeeeeCCCCC
Confidence            999999877532 2211                124566667753211222333333 1122222222211         


Q ss_pred             -------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          355 -------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       355 -------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                   + .++.+|||++.   |+.+++++.|+++|...
T Consensus       354 ~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~  396 (398)
T PRK07504        354 THKNLSPEARAELGISEGFLRLSAGL---EDTDDLIEDLAAALKKV  396 (398)
T ss_pred             CcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                         0 13679999997   66778888888888764

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.95  E-value=1.2e-25  Score=209.99  Aligned_cols=287  Identities=22%  Similarity=0.197  Sum_probs=203.2

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~  142 (400)
                      .+....+++.++++.    |  .+++++++|+++|+..++.++.++||+|+++.|+|.+....+.    ..|+++..+ +
T Consensus        50 ~p~~~~le~~lA~l~----g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~-d  122 (382)
T TIGR02080        50 NPTRDLLQQALAELE----G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFV-D  122 (382)
T ss_pred             CchHHHHHHHHHHHh----C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEE-C
Confidence            344566666666655    4  4689999999999999999999999999999999987665442    234565555 3


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD  222 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  222 (400)
                      .      .|++.+++.+++++  |+|++++|+||||.+++   +++|.++|+++|+++++|++|..+.... +   ...+
T Consensus       123 ~------~d~~~l~~ai~~~t--klV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~-p---l~~g  187 (382)
T TIGR02080       123 Q------GDEQALRAALAQKP--KLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN-P---LALG  187 (382)
T ss_pred             C------CCHHHHHHhcCcCc--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC-c---hhhC
Confidence            1      27889999998765  99999999999999999   8888999999999999999998654322 1   1224


Q ss_pred             cEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       223 ~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      .+++++|+||+++ .++++.|+++.++  +++.+++...+......++++..+.+...++.    +..+++++.+++..+
T Consensus       188 aDivv~S~sK~l~G~~~~~~G~i~~~~--~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~t----l~~R~~~~~~na~~~  261 (382)
T TIGR02080       188 ADLVLHSCTKYLNGHSDVIAGAVIAKD--PQVAEELAWWANNLGVTGGAFDSYLTLRGLRT----LVARMRLQQRNAQAI  261 (382)
T ss_pred             CCEEEeecceeccCCCCceeEEEEeCC--HHHHHHHHHHHHccCCCCCHHHHHHHHcccch----HHHHHHHHHHHHHHH
Confidence            5689999999995 4678899988765  78888888777666777788877766555543    667788888999999


Q ss_pred             HHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc----------
Q 015768          302 REALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----------  354 (400)
Q Consensus       302 ~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------  354 (400)
                      .+.|++++.+. +..|                ..+-.+.+.+........++...| +=..+.+.-|...          
T Consensus       262 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~  340 (382)
T TIGR02080       262 VEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGL-SLFTLAESLGGVESLIAHPATMT  340 (382)
T ss_pred             HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcC-CcceEeccCCCCcceeECCCccC
Confidence            99999877632 2221                123456667753111122333332 1122233333211          


Q ss_pred             ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                  + .++.+|||++.   |+.+++++.|.+++..
T Consensus       341 ~~~~~~~~~~~~gi~~~liRlsvGl---E~~~dl~~dl~~al~~  381 (382)
T TIGR02080       341 HAAMGPEARAEAGISDTLLRLSVGL---EDADDLIADLEQGLRA  381 (382)
T ss_pred             cccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                        0 13589999997   6677788888888763

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.95  E-value=8.4e-25  Score=210.50  Aligned_cols=340  Identities=16%  Similarity=0.094  Sum_probs=234.2

Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhcCCCCCCC---CCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH--HH-H
Q 015768           35 LAQGVVYWQPPKMAMEKVKELVWDPSISKY---GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI--VL-T  108 (400)
Q Consensus        35 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y---~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~--~~-~  108 (400)
                      ++.|++++..+|.+.+++.+...-.....|   ...+|..+++.++.+++++.+|++...+..++|+++.+..+  ++ .
T Consensus        73 ~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~  152 (481)
T PRK04366         73 YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAY  152 (481)
T ss_pred             ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHH
Confidence            566777777889999988876322246678   34678889999999999999998743444344444444322  22 3


Q ss_pred             hcCCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          109 LCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       109 l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      +.++||    +|+++.++|+.+...++..|++++.+ |.+.+ +.+|++++++.+++++  ++|++++|+ ++|.+  ..
T Consensus       153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v-~~~~~-~~~D~e~L~~~i~~~t--~~V~v~~Pn-~tG~~--~~  225 (481)
T PRK04366        153 HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEI-PSNED-GLVDLEALKAAVGEDT--AALMLTNPN-TLGLF--ER  225 (481)
T ss_pred             hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEe-ecCCC-CCcCHHHHHhhcccCC--eEEEEeCCC-Ccccc--ch
Confidence            356666    99999999999999999999999999 88644 5789999999998766  899999988 99965  23


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC----cceeEEEEccCCcHHHHHHHHHh
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      ++++|+++|+++|+++++|+++.....+.  ......+.+++++|.+|+++.|    |..+|++.++   +++.+.+...
T Consensus       226 dl~eI~~~a~~~gal~iVD~a~~~~~~g~--~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~---~~~~~~lp~~  300 (481)
T PRK04366        226 NILEIAEIVHEAGGLLYYDGANLNAILGK--ARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVK---EELAPFLPVP  300 (481)
T ss_pred             HHHHHHHHHHHcCCEEEEEecChhhhccc--CCccccCCCEEEEechhhcCCCCCCCCCCeeeeeeh---hhhHhhCCCC
Confidence            49999999999999999999986332221  1223456789999999998643    4557888877   4454444210


Q ss_pred             -------------------hccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768          261 -------------------QDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  320 (400)
Q Consensus       261 -------------------~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  320 (400)
                                         +....++.+.....++..++.. +.+.+++..++...+++++++.|+++..+.+ ......
T Consensus       301 ~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~-~~~~~~  379 (481)
T PRK04366        301 VVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPY-DRPCMH  379 (481)
T ss_pred             eeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccC-CCCeeE
Confidence                               0111122333444455555443 4455667778888889999999988622222 111112


Q ss_pred             EEEeeCC---CCCCCHHHHHHHHHHhcCeEEeCCCccC-CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          321 YLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       321 ~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      -+.++++   ....+..++.++|. ++||.+....... ..+.+|++++. +|.+|++.+++.|+++.++..+
T Consensus       380 ~~~~~~~~~~~~g~~~~~v~~~L~-~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~  451 (481)
T PRK04366        380 EFVLSGKKLKETGVRTLDIAKRLL-DYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE  451 (481)
T ss_pred             EEEEECccccccCCCHHHHHHHHH-HCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            2333432   11235778888886 7899875222212 36789999987 8999999999999999887764

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.95  E-value=1.4e-24  Score=204.39  Aligned_cols=343  Identities=16%  Similarity=0.179  Sum_probs=233.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+..  .++.. -..+...++++.|.+.... .+.+++++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e  112 (408)
T PRK04612         37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANE  112 (408)
T ss_pred             CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHH
Confidence            5678999998875  4454 78999999999887632  11111 1234455667777655321 378999999999999


Q ss_pred             HHHHHhcC--------CC-CEEEEeCCCccchhHHHHh-cCcEEE--EeccCCCC----CCCCCHHHHHHhhccCCCCeE
Q 015768          104 NIVLTLCD--------AG-DSVVMFAPYYFNSYMSFQM-TGVTHI--LVGPCSSK----TLHPDADWLEKTLETKPTPKL  167 (400)
Q Consensus       104 ~~~~~l~~--------~g-d~vlv~~p~~~~~~~~~~~-~g~~~~--~~~~~~~~----~~~~~~e~l~~~l~~~~~~~~  167 (400)
                      .+++....        ++ .+|+....+|++....... .|....  .+.|..+.    .+ .|++.+++.+..++ +.+
T Consensus       113 ~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~-~aa  190 (408)
T PRK04612        113 AAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGD-VAA  190 (408)
T ss_pred             HHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCC-EEE
Confidence            99987642        12 4699999999887644332 221110  01011111    11 27888988886433 444


Q ss_pred             EEEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768          168 VSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       168 v~l~~p~nptG~~~--~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      + +..|.+++|-+.  +.+++++|.++|++||+++|+||+|.++...+........+..+.+.+++|.+| +|+++|+++
T Consensus       191 v-i~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~-~G~piga~~  268 (408)
T PRK04612        191 V-MLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALG-GGFPIGAML  268 (408)
T ss_pred             E-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhc-CCCceEEEE
Confidence            4 455666666443  467999999999999999999999998766553222222345566789999998 899999999


Q ss_pred             ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceE
Q 015768          246 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIY  321 (400)
Q Consensus       246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~  321 (400)
                      .+   +++.+.+.......+++.+++.+.++.+.|+..++  ++..++.+++.+++.+.|+++    +.+..+... |.+
T Consensus       269 ~~---~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~  342 (408)
T PRK04612        269 AG---PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS--PQIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLM  342 (408)
T ss_pred             EC---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceE
Confidence            88   67777776555567788899999999999875222  345566666667776666653    333334455 566


Q ss_pred             EEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          322 LWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       322 ~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +-+.+... ......+...+. ++||.+.+.    +++.+|+.++. .+++++++++++|.+++.++..
T Consensus       343 ~~i~~~~~~~~~a~~i~~~l~-~~Gvlv~~~----g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~  406 (408)
T PRK04612        343 LGAVLAPAHAGQAGAILDLAA-EHGLLLLQA----GPDVLRFVPALNLTDAELADGLARLRLALADYVA  406 (408)
T ss_pred             EEEEecCchhhHHHHHHHHHH-HCCeEEeeC----CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence            65665321 112455666664 899999763    35889999887 8999999999999999988754

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.95  E-value=1e-24  Score=207.39  Aligned_cols=352  Identities=14%  Similarity=0.133  Sum_probs=232.8

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+...  +.......+.+.++++.|.+.....-+.++|+++|++|++
T Consensus        38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve  115 (443)
T PRK08360         38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDAND  115 (443)
T ss_pred             CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHH
Confidence            5678899998874  4554 789999999999886422  1111122345566777776654433368999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHH-HHhcCc------------EEEEeccCCCC-C--CC--------CCHHHHHH
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMS-FQMTGV------------THILVGPCSSK-T--LH--------PDADWLEK  157 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~-~~~~g~------------~~~~~~~~~~~-~--~~--------~~~e~l~~  157 (400)
                      .+++...  .....|+....+|++.... +...|.            .+..+ |..+. .  +.        .+++.+++
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (443)
T PRK08360        116 GAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYI-PYPDCYRCPFGKEPGSCKMECVEYIKE  194 (443)
T ss_pred             HHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEE-eCCccccccccCchhhhHHHHHHHHHH
Confidence            9999764  2336788888888886532 222221            11222 21110 0  00        12445666


Q ss_pred             hhcc---CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccc
Q 015768          158 TLET---KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFS  231 (400)
Q Consensus       158 ~l~~---~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~s  231 (400)
                      .+..   ...+++|+++..+||+|.+++ .+++++|.++|++||+++|+||+|.++...+.....  .....+++  ++|
T Consensus       195 ~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii--tls  272 (443)
T PRK08360        195 KFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLG  272 (443)
T ss_pred             HHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE--Eec
Confidence            6642   234688888866899998776 668999999999999999999999987655532111  11122333  679


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----  307 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----  307 (400)
                      |.+| +|+|+|+++.+   +++++.+.......+++.+++.+.++.++|+.-.+  .+..++.+++.+++++.|++    
T Consensus       273 K~l~-~G~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~  346 (443)
T PRK08360        273 KPLG-GGLPISATIGR---AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE--KNLLKRAEKLGNYTKKRLEEMKKK  346 (443)
T ss_pred             cccc-CCceeEEEEEc---HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9998 89999999998   78888887655566788899999998888875221  23445555666666665554    


Q ss_pred             CCCCcccCCCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          308 LGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      .+.+..+.+. |.++-+.+....       .....+...++ ++||.+.+.    ..+.+|++++. ++++++++++++|
T Consensus       347 ~~~v~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lr~~P~l~~t~~~id~~~~~l  420 (443)
T PRK08360        347 HELIGDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFF----SGNVLRIQPPLTIEKEVLDEGLDIL  420 (443)
T ss_pred             CCCeeeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHH
Confidence            3333333344 555555553210       01235666665 899998653    25789998877 8999999999999


Q ss_pred             HHHHHHHhccCcccccc
Q 015768          380 RRGLEELVKDGMVQEHV  396 (400)
Q Consensus       380 ~~~l~~~~~~~~~~~~~  396 (400)
                      .+++..+ +++++-+++
T Consensus       421 ~~~l~~~-~~~~~~~~~  436 (443)
T PRK08360        421 EEAIEDV-EEGKVPDEV  436 (443)
T ss_pred             HHHHHHH-HhccCCHHH
Confidence            9999986 445554443

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.95  E-value=5.7e-25  Score=207.16  Aligned_cols=286  Identities=21%  Similarity=0.206  Sum_probs=198.8

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |.+  ..+++++++.|+..++.++.++||+|+++.|.|.+..    ..++..|++++.+ +.
T Consensus        65 p~~~~le~~lA~l~----g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~v-d~  137 (403)
T PRK07503         65 PTLALLEQRMASLE----GGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHV-DL  137 (403)
T ss_pred             chHHHHHHHHHHHh----CCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEe-CC
Confidence            44566666666655    543  4577778889999999999999999999999996644    3456789998888 54


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                      +      +++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|...... .+   ...+.
T Consensus       138 ~------d~~~l~~~i~~~t--klV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~-~~---l~~g~  202 (403)
T PRK07503        138 T------DPAALKAAISDKT--RMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ-RP---LELGA  202 (403)
T ss_pred             C------CHHHHHHhcCccC--cEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-Cc---hhhCC
Confidence            3      6889999987765  99999999999999999   889999999999999999999855332 11   12355


Q ss_pred             EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +++++|++|++|.+| .++|+++.+   +++.++++..  .......++++..+.+...|+.    +..+.++..+++..
T Consensus       203 Di~v~S~tK~l~g~gd~~gG~v~~~---~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~  275 (403)
T PRK07503        203 DLVVHSATKYLGGHGDITAGLVVGG---KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT----LALRMDRHCASAQA  275 (403)
T ss_pred             CEEEccccccccCCCceeEEEEEcC---HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHHH
Confidence            699999999998654 778999866   7788877633  3334556677777666555543    56777777888999


Q ss_pred             HHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc------
Q 015768          301 IREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC------  354 (400)
Q Consensus       301 l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~------  354 (400)
                      +.+.|++++.+. +..|.                .+-++.+.+...   ...... +.+.-.++   +.-|...      
T Consensus       276 ~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~---~~~~~~-~~~~l~l~~~~~slG~~~sl~~~~  351 (403)
T PRK07503        276 VAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGG---IAAGRR-FMNALQLFARAVSLGDAESLAQHP  351 (403)
T ss_pred             HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCC---HHHHHH-HHHhCCcceeecccCCCCccCcCC
Confidence            999998877532 11111                123444455432   222222 22323332   1111111      


Q ss_pred             ----------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          355 ----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       355 ----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                                      + .++.+|||++.   |+.+++++.|.+++......
T Consensus       352 ~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~Al~~~~~~  400 (403)
T PRK07503        352 ASMTHSTYTPEERAEHGISEGLVRLSVGL---EDVADILADLAQALDACAVA  400 (403)
T ss_pred             CCCccccCCHHHHHhcCCCCCeEEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence                            0 13579999997   67778888899998876543

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.95  E-value=4e-25  Score=207.82  Aligned_cols=216  Identities=20%  Similarity=0.182  Sum_probs=167.8

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |  .++.+++++++.|+..++.++.++||+|+++...|.+.    ...++..|++++++ +.
T Consensus        70 p~~~~le~~lA~l~----g--~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~v-d~  142 (403)
T PRK07810         70 PTVSMFEERLRLIE----G--AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV-DG  142 (403)
T ss_pred             chHHHHHHHHHHHh----C--CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEE-CC
Confidence            34556666666665    5  34788899999999999999999999999988666443    34567789999988 53


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                            .|++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|.......    ....+.
T Consensus       143 ------~d~~~l~~ai~~~t--klV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~----~~~~ga  207 (403)
T PRK07810        143 ------EDLSQWEEALSVPT--QAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR----GLPLGA  207 (403)
T ss_pred             ------CCHHHHHHhcCcCc--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC----hhhcCC
Confidence                  27889999998776  99999999999999999   9999999999999999999998654432    123356


Q ss_pred             EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++++.|++|+++..|.++ |++++++  +.+.+.+..........++++.++.+...|+.    +..+.++..+++.++.
T Consensus       208 Divv~S~tK~l~g~g~~~gG~v~~~~--~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----l~~R~~~~~~~a~~~a  281 (403)
T PRK07810        208 DVVVYSGTKHIDGQGRVLGGAILGDR--EYIDGPVQKLMRHTGPALSAFNAWVLLKGLET----LALRVRHSNASALRIA  281 (403)
T ss_pred             cEEEccCCceecCCcCceeEEEEeCh--HHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHHHH
Confidence            899999999997667665 8888773  33334455544444556788888877777765    6788888899999999


Q ss_pred             HHhccCCCC
Q 015768          303 EALSPLGEG  311 (400)
Q Consensus       303 ~~L~~~~~~  311 (400)
                      +.|++++.+
T Consensus       282 ~~L~~~p~v  290 (403)
T PRK07810        282 EFLEGHPAV  290 (403)
T ss_pred             HHHhcCCCc
Confidence            999988764

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.95  E-value=1.7e-24  Score=205.04  Aligned_cols=348  Identities=14%  Similarity=0.094  Sum_probs=230.7

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+.....  ......+....+++.+.+...-. .+.++|++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~--~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~  114 (425)
T PRK07495         37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTC--HQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAV  114 (425)
T ss_pred             CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcc--cCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence            5678899998875  3344 78999999999987632111  11112334455666666554322 26899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCC--CCCCC--CCHHHHHHhhc--
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCS--SKTLH--PDADWLEKTLE--  160 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~--~~~~~--~~~e~l~~~l~--  160 (400)
                      +.+++...  ....+|+....+|++....... .|.             .++.+ |.+  ..+..  -.++.+++.+.  
T Consensus       115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~l~~~~~~~  193 (425)
T PRK07495        115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHV-PFPVELHGVSVEQSLAALDKLFKAD  193 (425)
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEe-cCCcccccccHHHHHHHHHHHHHhc
Confidence            99999764  2346899999999887533211 110             12223 322  12211  12455576664  


Q ss_pred             -cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          161 -TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       161 -~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                       ....+++|+++..+..+|. .+|.+++++|.++|++||+++|+||++.++...+........+....+.+++|.++ +|
T Consensus       194 ~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~-~G  272 (425)
T PRK07495        194 VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLA-GG  272 (425)
T ss_pred             cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhc-CC
Confidence             1234688888855444784 57999999999999999999999999998765553322222344455778999998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCccc
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVK  314 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~  314 (400)
                      +++|+++.+   +++.+.+.......+++.+++.+.++.+.++..++  .+..++.+++.+++++.|++    ++.+.-+
T Consensus       273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v  347 (425)
T PRK07495        273 FPLAAVTGR---AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRLASLRETVPEIADI  347 (425)
T ss_pred             ccceEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHhhCCCeeee
Confidence            999999998   78877776555567888999999977777764211  23444455555555555543    3432223


Q ss_pred             CCCCceEEEeeCCCCC---CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          315 GGEGAIYLWARLPEKH---LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~---~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ... |.++|+.+....   .+   ...+...++ ++|+.+.+...  ..+.+||.+.. ++++++++++++|.++++++.
T Consensus       348 rG~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~  423 (425)
T PRK07495        348 RGP-GFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALDILEASILEAS  423 (425)
T ss_pred             ecC-ceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence            333 888888874321   01   234555554 79999965321  24889999887 899999999999999998764

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.95  E-value=5.6e-25  Score=193.87  Aligned_cols=312  Identities=21%  Similarity=0.267  Sum_probs=205.8

Q ss_pred             CCCC-CCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH--HHHHHhc-------CC-----CCEEEEeCCCccc
Q 015768           61 ISKY-GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV--NIVLTLC-------DA-----GDSVVMFAPYYFN  125 (400)
Q Consensus        61 ~~~y-~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~--~~~~~l~-------~~-----gd~vlv~~p~~~~  125 (400)
                      ..+| +...|.++.|+.+++.+    |+++++|++..+++.-+.  .+.++++       +|     .-+.|++.|+|..
T Consensus        61 ~RNY~G~l~Gipe~r~l~a~ll----gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDR  136 (425)
T PF12897_consen   61 CRNYPGGLDGIPEARELFAELL----GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDR  136 (425)
T ss_dssp             TTSS-S-SS--HHHHHHHHHHH----TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HH
T ss_pred             ccCCCCccCChHHHHHHHHHHh----CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchH
Confidence            5579 88899999999999988    899999999877655443  2222221       11     2367999999999


Q ss_pred             hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC-CCCCCccCCCHHHHHHHHHH-HHHcCCEEEEc
Q 015768          126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDL-CKAAGSWLVVD  203 (400)
Q Consensus       126 ~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~-p~nptG~~~~~~~l~~i~~l-~~~~~~~li~D  203 (400)
                      +..+.+..|++.+.| |..++|  +|+|.+++++.+++.+|.|+.+. .+||||.++|.|..++++++ +...+..|+-|
T Consensus       137 HFai~E~~Giemi~V-pM~~dG--PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WD  213 (425)
T PF12897_consen  137 HFAITEHFGIEMIPV-PMTEDG--PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWD  213 (425)
T ss_dssp             HHHHHHHCT-EEEEE-EEETTE--E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE
T ss_pred             HHHHHHhhCcEEEec-CCCCCC--CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEee
Confidence            999999999999999 999996  69999999998777789998773 48999999999999999998 34679999999


Q ss_pred             cccccccc-CCCCcc-----------ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHH
Q 015768          204 NTYEYFMY-DGRKHC-----------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASII  271 (400)
Q Consensus       204 ~a~~~~~~-~~~~~~-----------~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~  271 (400)
                      ++|..... +..+..           ...+++++...|+||.. .+|.+++++.++   ++.++++.+.....+.++..+
T Consensus       214 NAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS---~~Nl~~~~~~~~~~tIgpdKv  289 (425)
T PF12897_consen  214 NAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAAS---EANLAWIKKHLSVQTIGPDKV  289 (425)
T ss_dssp             -TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHHH-S---HH
T ss_pred             cCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecC---HHHHHHHHHHhcCceeCccHH
Confidence            99997665 222211           11368899999999987 699999999999   788888888777789999999


Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHH----HHHHHH----HHHhc-cCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          272 SQHLALYSLQTGPEWVTERVKDLV----RNREII----REALS-PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       272 ~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~l----~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      .|..-..++.+.+..+.+.+++++    -.-+..    .+.|. ..+..+|..|.+|+|+++...++  ...++.+ +++
T Consensus       290 NQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G--~AkrvV~-lak  366 (425)
T PF12897_consen  290 NQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG--TAKRVVE-LAK  366 (425)
T ss_dssp             HHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT---HHHHHH-HHH
T ss_pred             HHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC--hHHHHHH-HHH
Confidence            999999999873313333333332    233333    34444 34456899999999999998875  3667776 668


Q ss_pred             hcCeEEeC-CCcc--C---CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          343 RHGVVVIP-GGAC--G---CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       343 ~~gi~v~~-g~~~--~---~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.||.+.| |..|  +   ....|||+++..+.+|++.+++.+..+++-.
T Consensus       367 eAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~la  416 (425)
T PF12897_consen  367 EAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKLA  416 (425)
T ss_dssp             HTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHHH
T ss_pred             HhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999988 5544  1   2468999999989999999999998877643

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.95  E-value=1.3e-24  Score=203.30  Aligned_cols=360  Identities=13%  Similarity=0.062  Sum_probs=253.7

Q ss_pred             hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHHhh
Q 015768           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      +...+...+.-+.+..+++.+.|+|-.++|..  ++.+++++...+.+...      ..|+.....++++....++..+.
T Consensus        30 l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l  107 (493)
T PRK13580         30 ILHVEPRIAEAIRQELADQRSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL  107 (493)
T ss_pred             HHhhCHHHHHHHHHHHHHHhcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence            33456667777777888889999998888775  58899988877765322      23444566678888888888999


Q ss_pred             cCCCCCcEEEeCChHHHHHHHHHHhcCC-------------------------------CCEEEEeCCCccchhHH---H
Q 015768           85 NKLYKSSVMVTAGANQAFVNIVLTLCDA-------------------------------GDSVVMFAPYYFNSYMS---F  130 (400)
Q Consensus        85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~-------------------------------gd~vlv~~p~~~~~~~~---~  130 (400)
                      +|.+.-+|...+|+ .|+..++.++++|                               ||+|+..++.+.++...   .
T Consensus       108 f~a~~anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~  186 (493)
T PRK13580        108 FGAEHAYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRP  186 (493)
T ss_pred             hCCCcccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCccc
Confidence            99887777766655 8999999999876                               79999887776554321   1


Q ss_pred             HhcC--cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 015768          131 QMTG--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY  208 (400)
Q Consensus       131 ~~~g--~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~  208 (400)
                      ...|  .+...+ +++++...+|.+.+++.+.+.+  +.|++++.+|- |...|   +++|.++|+++|+++++|++|+.
T Consensus       187 n~~~~~~~~~~y-~vd~~~g~iD~d~l~~~~~~~~--plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~  259 (493)
T PRK13580        187 NISGKMFHQRSY-GVDPDTGLLDYDEIAALAREFK--PLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFA  259 (493)
T ss_pred             chhhheeeeEec-ccCcccCccCHHHHHHHHhhcC--CEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhh
Confidence            1222  456666 7776656799999999998776  67777777776 45778   88999999999999999999997


Q ss_pred             cccCCCCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-c
Q 015768          209 FMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-P  284 (400)
Q Consensus       209 ~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~  284 (400)
                      +..++....   ....+.+++++|+||++.  |.+.|+++++   +++.+.+.........++.++...+++.++... .
T Consensus       260 Gligg~~~~~~~~~~~~~D~vtgT~hKaL~--GP~GG~I~~~---~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~  334 (493)
T PRK13580        260 GLVAGKVFTGDEDPVPHADIVTTTTHKTLR--GPRGGLVLAK---KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEART  334 (493)
T ss_pred             ceeccccchhhcCCCCCCcEEEeCChhhcc--CCCeEEEEec---HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhC
Confidence            776533221   122467899999999983  4446999988   778888854442222233333444444444431 1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---C---CC
Q 015768          285 EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---C---RG  358 (400)
Q Consensus       285 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~---~~  358 (400)
                      ..++++++++.++.++|++.|.+.|...+.+...+..+++.+.+...+...+...| .+.||.+.+-..+.   +   +.
T Consensus       335 ~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L-~e~GI~vn~i~~Ptvp~g~~~~s  413 (493)
T PRK13580        335 PEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESAL-LDAGIVTNRNSIPSDPNGAWYTS  413 (493)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHH-HHCCeEEccccCCCCCCCCCCCc
Confidence            22467889999999999999999887333332336777778865321233444444 68999997554432   1   56


Q ss_pred             eEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Q 015768          359 HLRISFGG-----LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       359 ~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .|||++..     ++++|++++++.|.++++..
T Consensus       414 rLRIg~~A~ttrg~teedi~~iad~l~~~l~~~  446 (493)
T PRK13580        414 GIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT  446 (493)
T ss_pred             eEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence            89999764     35899999999999998765

>TIGR01814 kynureninase kynureninase

Probab=99.95  E-value=1e-24  Score=207.10  Aligned_cols=343  Identities=13%  Similarity=0.016  Sum_probs=228.2

Q ss_pred             chHHHHHHHHHhcC-----CCeEEcCCCCCCCCCcHHHHHHHHHhhcCC---CCCCCCC-CCCcHHHHHHHHHHHHhhcC
Q 015768           16 MPIMVQIQELVRGA-----KNAVSLAQGVVYWQPPKMAMEKVKELVWDP---SISKYGA-DEGLPELRDALVKKLNQENK   86 (400)
Q Consensus        16 ~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~-~~g~~~~~~~~a~~l~~~~~   86 (400)
                      ...+..++..|--.     ++++.|+.+... +.|+.+.+++.+++...   ....+.. ..+...+.+++.+ + +.+|
T Consensus         7 ~~~~~~~r~~f~~~~~~~~~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g   83 (406)
T TIGR01814         7 ADPLRALRDEFHLPKIGDENAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG   83 (406)
T ss_pred             cChHHHHHHhcCCCcccCCCCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC
Confidence            44555666666433     678999977655 45888888887766431   1111111 1122233333333 3 5668


Q ss_pred             CCCCcEEEeCChHHHHHHHHHHhcCCC---CEEEEeCCCccchhH----HHHhcCcEE----EEeccCCCCCCCCCHHHH
Q 015768           87 LYKSSVMVTAGANQAFVNIVLTLCDAG---DSVVMFAPYYFNSYM----SFQMTGVTH----ILVGPCSSKTLHPDADWL  155 (400)
Q Consensus        87 ~~~~~i~~~~g~t~a~~~~~~~l~~~g---d~vlv~~p~~~~~~~----~~~~~g~~~----~~~~~~~~~~~~~~~e~l  155 (400)
                      +++++|++++|+|++++.++.++.+++   +.|++...+|++...    .++..|+++    +.+ +.+.+ +.++++++
T Consensus        84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-g~~~~~~l  161 (406)
T TIGR01814        84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQI-EPREE-ETLRLEDI  161 (406)
T ss_pred             CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEe-ccCCC-CccCHHHH
Confidence            899999999999999999999986554   368888899988543    345668776    455 44433 35688999


Q ss_pred             HHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768          156 EKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY  234 (400)
Q Consensus       156 ~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  234 (400)
                      ++.++. ..+.++|++++++|.+|.+.|   +++|.++|+++|+++++|++++.+.   .+......+.+++++|.+|++
T Consensus       162 ~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~---~~id~~~~gvD~~~~s~hK~l  235 (406)
T TIGR01814       162 LDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGN---VPLDLHDWGVDFACWCTYKYL  235 (406)
T ss_pred             HHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCC---cccccccCCCCEEEEcCcccc
Confidence            888751 122489999999999999999   9999999999999999999999532   233333457789999999998


Q ss_pred             C-CCcceeEEEEccCCcHHHHHHHHHhh-----------------------ccCCcCccHHHHHHHHHHhcCC-cHHHHH
Q 015768          235 G-MMGWRVGYIAYPSEVEGFATQLLKVQ-----------------------DNIPICASIISQHLALYSLQTG-PEWVTE  289 (400)
Q Consensus       235 g-~~g~~~G~i~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~  289 (400)
                      + .+|  .|.++.++   . ...+....                       .....+++.+...++..+++.. ....++
T Consensus       236 ~g~pG--~~l~v~~~---~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~  309 (406)
T TIGR01814       236 NAGPG--AGAFVHEK---H-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEA  309 (406)
T ss_pred             CCCCC--eEEEEehh---h-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHH
Confidence            4 334  34334342   2 11121100                       0012346667777777677642 122467


Q ss_pred             HHHHHHHHHHHHHHHhccC----CCCcccCCCC----ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEE
Q 015768          290 RVKDLVRNREIIREALSPL----GEGAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLR  361 (400)
Q Consensus       290 ~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR  361 (400)
                      ..++...+.+++++.|+++    +++.+..+..    +..+.+.++   .+.+++...|. ++||.+..    ..++.+|
T Consensus       310 i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~-~~gi~v~~----~~~~~iR  381 (406)
T TIGR01814       310 LRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALI-KRGVIGDK----REPSVIR  381 (406)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHH-HCCEEEec----cCCCeEE
Confidence            7788888888998888774    2344444321    234556666   24678888775 78998853    2357999


Q ss_pred             EEe-cc-CCHHHHHHHHHHHHHHH
Q 015768          362 ISF-GG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       362 i~~-~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +|+ +. +|++|++.+++.|++++
T Consensus       382 iS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       382 VAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             EechhccCCHHHHHHHHHHHHHHh
Confidence            998 54 89999999999998764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.95  E-value=3.7e-24  Score=202.67  Aligned_cols=362  Identities=16%  Similarity=0.109  Sum_probs=235.8

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhh-cCCCCCCCCCC---CCcHHHHHHHHH---
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGAD---EGLPELRDALVK---   79 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~---~g~~~~~~~~a~---   79 (400)
                      +|+-++..+.....-+.+....+++.+++..+++..  +|.+++++...+ .+.. .+++.+   .| .+..+.+.+   
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~-~g~~gsr~~~G-~~~~~~lE~~~~   80 (416)
T PRK13034          5 FSDSLEEYDDEVFAAINKELERQQDHLELIASENFT--SPAVMEAQGSVLTNKYA-EGYPGKRYYGG-CEFVDEVEALAI   80 (416)
T ss_pred             hhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCC--CHHHHHHhcchhhcCCC-CCCCCCcccCC-ChHHHHHHHHHH
Confidence            566665666666666666666778889998888775  799999998885 4321 111111   12 233444444   


Q ss_pred             -HHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccch-hHHHHh--cCcE--EEEeccCCCCCCCCCHH
Q 015768           80 -KLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS-YMSFQM--TGVT--HILVGPCSSKTLHPDAD  153 (400)
Q Consensus        80 -~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~-~~~~~~--~g~~--~~~~~~~~~~~~~~~~e  153 (400)
                       .+++.+|.+ ..++++++|+.|+..++.++++|||+|+++..+|.+. ...++.  .+..  ...+ +.+..+..+|++
T Consensus        81 ~~la~l~g~~-~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~d~~  158 (416)
T PRK13034         81 ERAKQLFGCD-YANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQY-GVDRLTGLIDYD  158 (416)
T ss_pred             HHHHHHhCCC-ceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEc-ccccccCCcCHH
Confidence             666666754 3335568899999999999999999999999999773 222221  1222  1345 555556678999


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA  233 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~  233 (400)
                      ++++.+.... +++|+++.+.  +|...|   +.+|.++|++||+++++|++|+.+..+...........+++++|++|+
T Consensus       159 ~le~~l~~~~-~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~  232 (416)
T PRK13034        159 EVEELAKEHK-PKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKT  232 (416)
T ss_pred             HHHHHHhhcC-CeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCccc
Confidence            9999886432 5888776543  578888   888888999999999999999876654322211113478999999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCC-cCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      ++  |...|++++++  +++.++++....... .+..++...++..++... .....++++++.++.++|++.|++.+. 
T Consensus       233 l~--g~~GG~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~-  307 (416)
T PRK13034        233 LR--GPRGGMILTND--EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGY-  307 (416)
T ss_pred             CC--CCCCeEEEECc--HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCC-
Confidence            94  22248777764  555566655433221 122333333333333321 122346678999999999999988855 


Q ss_pred             cccCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC------ccCCCCeEEEEecc-----CCHHHHHHHHHHH
Q 015768          312 AVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACGCRGHLRISFGG-----LVEDDCKAAADRL  379 (400)
Q Consensus       312 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~------~~~~~~~iRi~~~~-----~~~~~~~~~~~~l  379 (400)
                      .+..+ .....+.+.+.....+...+..+| +++||.+.+-.      ....+..+|++++.     ++++|++++++.|
T Consensus       308 ~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l  386 (416)
T PRK13034        308 DLVSGGTDNHLLLVDLRPKGLSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWI  386 (416)
T ss_pred             EeccCCCCCcEEEEEcCCCCCCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHH
Confidence            44332 235667777665433455565656 58899997521      11235689999664     3589999999999


Q ss_pred             HHHHHHH
Q 015768          380 RRGLEEL  386 (400)
Q Consensus       380 ~~~l~~~  386 (400)
                      .+++.+.
T Consensus       387 ~~~~~~~  393 (416)
T PRK13034        387 LDVLDDL  393 (416)
T ss_pred             HHHHhcC
Confidence            9988743

>PLN02624 ornithine-delta-aminotransferase

Probab=99.95  E-value=1e-24  Score=209.33  Aligned_cols=344  Identities=13%  Similarity=0.114  Sum_probs=226.1

Q ss_pred             hcCCCeEEcCCCCCCC--C-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVVYW--Q-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~--~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+....  + .+|++++++.+.+.+......   .-..+...++++.+.+..+  .+.++++++|++|++
T Consensus        72 ~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~---~~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e  146 (474)
T PLN02624         72 PEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR---AFYNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVE  146 (474)
T ss_pred             CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc---ccCCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHH
Confidence            4578899998876333  2 589999999999987432221   1122344556666665554  468999999999999


Q ss_pred             HHHHHhcC--------C-C-CEEEEeCCCccchhHHHHhcCcEEEE---eccCCCC----CCCCCHHHHHHhhcc-CCCC
Q 015768          104 NIVLTLCD--------A-G-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK----TLHPDADWLEKTLET-KPTP  165 (400)
Q Consensus       104 ~~~~~l~~--------~-g-d~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~----~~~~~~e~l~~~l~~-~~~~  165 (400)
                      .+++....        + + ..|+....+|++..........+...   +.|..+.    .+ .|++.+++.++. ...+
T Consensus       147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~i  225 (474)
T PLN02624        147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEEDGDRI  225 (474)
T ss_pred             HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhCCCCE
Confidence            99986542        1 2 35788888888875443222211100   0011100    01 167889888863 2346


Q ss_pred             eEEEEeCCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768          166 KLVSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI  244 (400)
Q Consensus       166 ~~v~l~~p~nptG~~~~~~-~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i  244 (400)
                      ++|+++.++|++|.+++.+ ++++|.++|++||+++|+||+|.++...+........+....+.+++|.+|.+++++|++
T Consensus       226 aaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav  305 (474)
T PLN02624        226 AAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAV  305 (474)
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceee
Confidence            8888888999999987665 699999999999999999999987655443222111111122334689998566899999


Q ss_pred             EccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CC-CcccCCCCc
Q 015768          245 AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GE-GAVKGGEGA  319 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~  319 (400)
                      +.+   +++.+.+.......+++.+++.+.++.+.|+...+  .+..++..++.+.+++.|+++    +. +....+. +
T Consensus       306 ~~~---~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~-G  379 (474)
T PLN02624        306 LAD---KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGR-G  379 (474)
T ss_pred             eec---HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEee-E
Confidence            988   67777766555556777899999999988874221  123344455556666555543    21 2223344 4


Q ss_pred             eEEEeeCCCCC---CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          320 IYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       320 ~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .+..+.+....   ....+++..|. ++||.+.|+    .++++||+++. ++++++++++++|.+++++..
T Consensus       380 ~~~~i~l~~~~~~~~~a~~~~~~L~-e~GV~v~p~----~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~  446 (474)
T PLN02624        380 LLNAVVLNSPKLGPVSAYDVCLKLK-ERGLLAKPT----HDTIIRLAPPLSISEDELQECSKALSDVLEHDL  446 (474)
T ss_pred             EEEEEEecCCCcChHHHHHHHHHHH-hCCeEEecC----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence            44444453211   12456777764 899999885    36789999866 899999999999999997654

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.95  E-value=5.7e-25  Score=208.50  Aligned_cols=332  Identities=13%  Similarity=0.132  Sum_probs=227.8

Q ss_pred             hcCCCeEEcCCCCCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+++.....   .+|++++++.+.+.+....+  .. ........+++.+.+.++  .+.++++++|++|++
T Consensus        34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~--~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e  108 (401)
T TIGR01885        34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSS--RA-FYNDVFGEFAEYVTKLFG--YDKVLPMNTGAEAVE  108 (401)
T ss_pred             CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccc--cc-cCCHHHHHHHHHHHhhcC--CCEEEEeCccHHHHH
Confidence            56788999988764433   58999999999887632111  11 122344556666665555  468999999999999


Q ss_pred             HHHHHhc----------CCCCEEEEeCCCccch-hHHHHhcCc------------EEEEeccCCCCCCCCCHHHHHHhhc
Q 015768          104 NIVLTLC----------DAGDSVVMFAPYYFNS-YMSFQMTGV------------THILVGPCSSKTLHPDADWLEKTLE  160 (400)
Q Consensus       104 ~~~~~l~----------~~gd~vlv~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~~~e~l~~~l~  160 (400)
                      .++..+.          ...+.|+....+|++. ...+...+-            .++.+ |.      .|++++++.++
T Consensus       109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~le~~l~  181 (401)
T TIGR01885       109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKI-PY------NNLEALEEALE  181 (401)
T ss_pred             HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEe-CC------CCHHHHHHHHH
Confidence            9999863          2236788888888764 444443321            12222 21      26888998886


Q ss_pred             c-CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCC
Q 015768          161 T-KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       161 ~-~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~  236 (400)
                      . ....++|+++.+++++|...+ .+++++|.++|++||+++|+||+|.++...+.....  .....+++  +++|.++.
T Consensus       182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~--~~gK~l~~  259 (401)
T TIGR01885       182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV--LLGKALSG  259 (401)
T ss_pred             hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE--EeeccccC
Confidence            2 233577888888999999875 557999999999999999999999876554433211  11122333  46799985


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--Cccc
Q 015768          237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVK  314 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~  314 (400)
                      +++++|+++.+   +++++.+.......+++.+++.+.++.++|+...+  ....++.+++.+++++.|++++.  +...
T Consensus       260 g~~~ig~v~~~---~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~--~~l~~~~~~~~~~~~~~L~~l~~~~~~~~  334 (401)
T TIGR01885       260 GVYPVSAVLAD---DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE--EKLAENAEKLGEIFRDQLKKLPKPIITEV  334 (401)
T ss_pred             CCCCcEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhccCCceeEE
Confidence            55899999998   78887776533445677788999998888875222  13445677778899999988753  1222


Q ss_pred             CCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      .+. +.+..+.++...  .+..+++.+|. ++||.+.|+    .++.+||+++. ++++++++++++|.+++
T Consensus       335 ~g~-g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~lRi~p~l~~t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       335 RGR-GLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPT----HGNIIRLAPPLVITEEQLDEGLEIIKKVI  400 (401)
T ss_pred             eec-CeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEec----CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence            344 444444443321  24567888775 789999874    36789999876 79999999999998876

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK06460 hypothetical protein; Provisional

Probab=99.95  E-value=4.8e-25  Score=205.95  Aligned_cols=287  Identities=21%  Similarity=0.148  Sum_probs=192.1

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccc----hhHHHHhcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~  142 (400)
                      .+...++++.++++.    |.+ ..++ ++++++++..++.++.++||+|+++.|.|.+    +...++..|+++..+ +
T Consensus        44 ~p~~~~L~~~lA~l~----g~~-~~v~-~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~-~  116 (376)
T PRK06460         44 NPTVLELTKKIVELE----NAE-MGVA-FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS-N  116 (376)
T ss_pred             CccHHHHHHHHHHHh----CCC-cEEE-eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE-C
Confidence            355667777777766    553 3444 4666799999999999999999999876643    345677889998887 6


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD  222 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  222 (400)
                      .++      .+.+++.+++++  ++|++++|+||+|.++|   +++|.++|+++|+++|+|++|..+..    ......+
T Consensus       117 ~~~------~~~l~~~~~~~t--klV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~----~~~l~~~  181 (376)
T PRK06460        117 PGS------DNIIEKAKSKRY--DVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPIN----QKPLELG  181 (376)
T ss_pred             CCC------HHHHHHhcCCCc--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcccc----CChhhcC
Confidence            542      234555444544  99999999999999999   67888999999999999999975421    1122335


Q ss_pred             cEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       223 ~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      .++++.|+||+++. .+.++||++.+   +++++++...+.....+.++...+   .+++ +.++++.+++++.++++++
T Consensus       182 ~divv~S~sK~l~G~~~~~~G~~~~~---~~l~~~l~~~~~~~g~~~~~~~a~---~~l~-~~~~l~~r~~~~~~n~~~l  254 (376)
T PRK06460        182 ADIVVHSASKFLAGHNDVIAGLAAGY---GKLLNVIDQMRRTLGTSLDPHAAY---LTLR-GIKTLKIRMDVINRNAEQI  254 (376)
T ss_pred             CCEEEeecceeccCCCCceEEEEecC---HHHHHHHHHHHHhcCCCCCHHHHH---HHHh-chhhHHHHHHHHHHHHHHH
Confidence            67999999999952 23679999988   788888887665555444543322   2333 3577888999999999999


Q ss_pred             HHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCC----------Cc-
Q 015768          302 REALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG----------GA-  353 (400)
Q Consensus       302 ~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g----------~~-  353 (400)
                      .+.|++++.+. +..|                ..|-.+.+.+.....+..++++.+ +=..+.+.-|          .. 
T Consensus       255 ~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l-~~~~~~~s~Gg~~sl~~~p~~~~  333 (376)
T PRK06460        255 AEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSL-KLIIPAQTLGGVNSVISHPATMS  333 (376)
T ss_pred             HHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhC-CcceeccCCCCCceEEeCccccc
Confidence            99999876532 2222                123455566653211122333322 0001111111          00 


Q ss_pred             ---c--------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          354 ---C--------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       354 ---~--------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                         +        + .++.+|+|++.   ||.+++++.|.+|+..+
T Consensus       334 ~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~  375 (376)
T PRK06460        334 HRTLSLEERKIVGITDSLLRLSVGI---EDVNDLIEDLDRALSTL  375 (376)
T ss_pred             cccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence               0        0 14689999997   66778888888888754

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.95  E-value=7.8e-25  Score=205.14  Aligned_cols=214  Identities=21%  Similarity=0.235  Sum_probs=163.8

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |.  +++++++++++|+..++.++.++||+|+++.+.|.+..    ..++..|+++..+ +.
T Consensus        54 p~~~~le~~la~l~----g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v-~~  126 (380)
T TIGR01325        54 PTVAAFEERIAALE----GA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFV-DP  126 (380)
T ss_pred             chHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEE-CC
Confidence            33555666666654    54  56788999999999999999999999999999887644    3456789998888 54


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                      +      |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|..+....    ....+.
T Consensus       127 ~------d~~~l~~~i~~~t--klV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~----pl~~g~  191 (380)
T TIGR01325       127 T------DLNAWEAAVKPNT--KLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ----PLKLGA  191 (380)
T ss_pred             C------CHHHHHHhcCCCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC----chhhCC
Confidence            3      6888988887665  99999999999999999   8999999999999999999998544322    123356


Q ss_pred             EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++++.|++|+++.+|.++ |+++.+   +++++.+...........++...+.+...++    .+..++++..+++..+.
T Consensus       192 Divv~S~sK~l~g~g~~~gG~vv~~---~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~----tl~~r~~~~~~~a~~la  264 (380)
T TIGR01325       192 DVVVYSATKHIDGQGRVMGGVIAGS---EELMAEVAVYLRHTGPAMSPFNAWVLLKGLE----TLSLRMQKQFDSALAIA  264 (380)
T ss_pred             CEEEeeccceecCCCCeEEEEEEeC---HHHHHHHHHHHHhhCCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHH
Confidence            799999999998667665 777777   6777777765544444455555554444444    36677888899999999


Q ss_pred             HHhccCCC
Q 015768          303 EALSPLGE  310 (400)
Q Consensus       303 ~~L~~~~~  310 (400)
                      +.|++++.
T Consensus       265 ~~L~~~p~  272 (380)
T TIGR01325       265 EWLQAQPQ  272 (380)
T ss_pred             HHHHcCCC
Confidence            99998875

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.95  E-value=4.2e-24  Score=200.31  Aligned_cols=330  Identities=18%  Similarity=0.114  Sum_probs=213.2

Q ss_pred             CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC-------CCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-------ISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGA   98 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~-------~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~   98 (400)
                      ..++++|++++ .++..++++.+++.+++.+..       .+..+  ...|...+.+++++.+++.+|.+ +.++ .+++
T Consensus         3 ~~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~-~~sG   80 (370)
T PRK05937          3 ESLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFI-VPSG   80 (370)
T ss_pred             CCceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEE-ECCh
Confidence            35789998876 888788888888777765531       11111  11234455555566666555753 3344 4445


Q ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCC
Q 015768           99 NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPG  174 (400)
Q Consensus        99 t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~  174 (400)
                      +.++..++..+.++||.|++..-+|.+....++......+.+ +      ..|++++++.++..    ...++|++++++
T Consensus        81 ~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~  153 (370)
T PRK05937         81 YMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSF-R------HNDLDHLESLLESCRQRSFGRIFIFVCSVY  153 (370)
T ss_pred             HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEe-c------CCCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence            577777777777788999998999988888887654444444 2      24889999988731    123577788999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  250 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~  250 (400)
                      |++|.+.|   +++|.++|+++|+++++|++|+.+.++....    .....+.++++.|+||.+|..|   +.++..   
T Consensus       154 s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~---  224 (370)
T PRK05937        154 SFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSS---  224 (370)
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcC---
Confidence            99999999   8899999999999999999998654432111    0111223467889999998656   334444   


Q ss_pred             HHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768          251 EGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  328 (400)
Q Consensus       251 ~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  328 (400)
                      ++..+.+...  ...++.+.+++...++..+++...+......++++++++++.+.|+..+.        +....+.++.
T Consensus       225 ~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~--------~~~~~i~~~~  296 (370)
T PRK05937        225 SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAP--------GCVQPIFLPG  296 (370)
T ss_pred             HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCC--------CCEEEEEeCC
Confidence            3444444321  11233445666666665666531111234556777888888887764321        1111233432


Q ss_pred             CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                        .+...+...| .++||.+..... ...+++|++++. +|++|++.+++.|+++++++.+
T Consensus       297 --~~~~~~~~~L-~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~  353 (370)
T PRK05937        297 --ISEQELYSKL-VETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK  353 (370)
T ss_pred             --hhHHHHHHHH-HHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence              2356677666 578998874322 235689999998 8999999999999999987543

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.95  E-value=1e-24  Score=204.59  Aligned_cols=284  Identities=18%  Similarity=0.121  Sum_probs=202.5

Q ss_pred             HHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCC
Q 015768           75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHP  150 (400)
Q Consensus        75 ~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~  150 (400)
                      +++++.+++..|  .+++++++|+++|+..++.+++++||+|+++.|+|.++..    .++..|++++++ +..      
T Consensus        68 ~~Le~~lA~l~g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v-d~~------  138 (394)
T PRK07050         68 LALAQRLAEIEG--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFY-DPL------  138 (394)
T ss_pred             HHHHHHHHHHhC--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEE-CCC------
Confidence            344444444446  4689999999999999999999999999999999988664    456789998888 432      


Q ss_pred             CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF  230 (400)
Q Consensus       151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~  230 (400)
                      +.+.+++.+++++  |+|++++|+||+|.+.+   +++|.++|+++|+++|+|++|.....    ......+.++++.|+
T Consensus       139 ~~~~l~~~i~~~t--klV~le~p~Np~~~~~d---i~~I~~ia~~~gi~livD~a~a~~~~----~~~l~~GaDi~v~S~  209 (394)
T PRK07050        139 IGAGIADLIQPNT--RLIWLEAPGSVTMEVPD---VPAITAAARARGVVTAIDNTYSAGLA----FKPFEHGVDISVQAL  209 (394)
T ss_pred             CHHHHHHhcCCCC--eEEEEECCCCCCccHhh---HHHHHHHHHHcCCEEEEECCcccccc----cCHHHcCCeEEEEEC
Confidence            3467888888766  99999999999987766   99999999999999999999975432    122334568999999


Q ss_pred             ccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          231 SKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       231 sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      +|.++ ..+.+.|+++..+  +++.+++...+.....+.++...+.+...++.    +..+++++.+++.++.+.|++++
T Consensus       210 tK~~~g~~~~~gG~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t----l~~Rl~~~~~~a~~la~~L~~~p  283 (394)
T PRK07050        210 TKYQSGGSDVLMGATITAD--AELHAKLKLARMRLGIGVSADDCSLVLRGLPS----LQVRLAAHDRSALEVAEWLKARP  283 (394)
T ss_pred             CceecCCCCeeEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHHHHhCC
Confidence            99995 2445689888765  78888888777655666677666655555543    56677888888888999888776


Q ss_pred             CCc-ccCC----------------CCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccC---------------
Q 015768          310 EGA-VKGG----------------EGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG---------------  355 (400)
Q Consensus       310 ~~~-~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~---------------  355 (400)
                      .+. +..|                ..+..+.+.+....  .+..++.+.| +..++.+.-|....               
T Consensus       284 ~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~  362 (394)
T PRK07050        284 EIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEAL-ELFAIGWSWGGACSLAMPYDVASMRTAKW  362 (394)
T ss_pred             CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcC-CCCeeccccCCccceEeeCcccccchhhc
Confidence            532 1111                12334445554321  2344555554 35555554443221               


Q ss_pred             --CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 --CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 --~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                        .++.+|||++.   |+.+++++.|.+++...
T Consensus       363 ~~~~~~iR~svGl---E~~~dl~~dl~~al~~~  392 (394)
T PRK07050        363 PHRGTLVRLYIGL---EDEADLIADLEQALEAA  392 (394)
T ss_pred             CCCCCEEEEEeCc---CCHHHHHHHHHHHHHHh
Confidence              12579999997   66777888888888764

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.95  E-value=1.5e-24  Score=203.56  Aligned_cols=285  Identities=20%  Similarity=0.186  Sum_probs=197.1

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |.  +..++++++++|+..++.++.++||+|+++.|.|.+..    ..+...|+++..+ +.
T Consensus        59 p~~~~le~~lA~l~----g~--~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v-d~  131 (391)
T TIGR01328        59 PTVSNLEGRIAFLE----GT--EAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFI-NM  131 (391)
T ss_pred             chHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEE-CC
Confidence            34556777777766    54  34788888899999999999999999999999887544    3445688888888 55


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                      +      |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|.......    ....+.
T Consensus       132 ~------d~e~l~~~i~~~t--klV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~----~~~~g~  196 (391)
T TIGR01328       132 A------IPEEVKAHIKDNT--KIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN----PVALGV  196 (391)
T ss_pred             C------CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC----chhcCC
Confidence            3      6888999887766  99999999999999999   8889999999999999999998544322    123356


Q ss_pred             EEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhc--cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      ++++.|++|.+|.+|.+ .|+++.+   +++++++.....  .....+++...+.+...|+.    +..++++..+++..
T Consensus       197 Divv~S~sK~lgg~g~~~gG~v~~~---~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t----l~~r~~~~~~na~~  269 (391)
T TIGR01328       197 DVVVHSATKYIGGHGDVVAGLICGK---AELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT----LNIRMKRHSENAMK  269 (391)
T ss_pred             CEEEccccccccCCCCceEEEEEcC---HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc----HHHHHHHHHHHHHH
Confidence            68999999999877765 5777776   788877765322  22334566666655555544    56677888889999


Q ss_pred             HHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------
Q 015768          301 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------  355 (400)
Q Consensus       301 l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------  355 (400)
                      +.+.|++++.+. +..|                ..+-.+.+.+........++.+.| +=..+...-|....        
T Consensus       270 la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~  348 (391)
T TIGR01328       270 VAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNL-KLIRLAVSLGDAETLIQHPASM  348 (391)
T ss_pred             HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhC-CcceEecCCCCCcccCcCCCcc
Confidence            999999877532 1111                123355566652111122333322 11112222222210        


Q ss_pred             ---------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          356 ---------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 ---------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                     .++.+|||++.   |+.+++++.|.+++..
T Consensus       349 ~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~  390 (391)
T TIGR01328       349 THAVVPKEEREAAGITDGMIRLSVGL---EDADDLIADLKQALDA  390 (391)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHhh
Confidence                           13579999997   6677888889888875

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.94  E-value=4.9e-24  Score=198.96  Aligned_cols=310  Identities=17%  Similarity=0.236  Sum_probs=215.8

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~  123 (400)
                      +++.++++.+.+..+..  +    +...+++++++++++..|.  +++++|+|+|+|+..++.++ .+|||+|+++.++|
T Consensus        10 ~~~e~~a~~~~~~~~~~--~----~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~   81 (376)
T TIGR02379        10 TGQELEYIAEAISEGKL--S----GDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTF   81 (376)
T ss_pred             CHHHHHHHHHHHHcCCc--c----CCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCc
Confidence            46678888888876432  1    1234566666766666564  67999999999999999988 79999999999999


Q ss_pred             cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      .++...+...|++++.+ +.+++++.+|++.+++.+++++  ++|+   |+||+|...+   +.+|.++|++||+++|+|
T Consensus        82 ~~~~~~~~~~G~~~v~v-d~d~~~~~~d~~~le~~i~~~t--k~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD  152 (376)
T TIGR02379        82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIESAITHRT--KAIV---PVHYAGVACD---MDTIMALANKHQLFVIED  152 (376)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence            99999999999999999 9988888899999999998765  8886   6678999999   889999999999999999


Q ss_pred             ccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------------
Q 015768          204 NTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----------------  264 (400)
Q Consensus       204 ~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~----------------  264 (400)
                      ++++.+. +.+.+. ....  ++.++||  +|.+. +|.+.|++++++  +++.++++.++...                
T Consensus       153 aa~~~g~~~~~~~~-g~~~--~~~~fSf~~~K~l~-~g~~gG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  226 (376)
T TIGR02379       153 AAQGVMSTYKGRAL-GSIG--HLGTFSFHETKNYT-SGGEGGALLIND--QAFIERAEIIREKGTNRSQFFRGEVDKYTW  226 (376)
T ss_pred             CccccCCccCCccc-CCCC--CEEEEeCCCCCcCc-ccCCceEEEECC--HHHHHHHHHHHHhCCCCccccccCCCccee
Confidence            9998765 443322 1111  2334444  47774 677889998887  78888887665311                


Q ss_pred             -----CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC---CCccc--CCC--Cc-eEEEeeCCCCCC
Q 015768          265 -----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVK--GGE--GA-IYLWARLPEKHL  331 (400)
Q Consensus       265 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~--~~~--~~-~~~~~~~~~~~~  331 (400)
                           .+.++.+....+...|+    .+++..++-++++++..+.|.++.   .....  .+.  .. .++++.++.. .
T Consensus       227 ~~~g~n~~~~~~~Aa~g~~qL~----~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~  301 (376)
T TIGR02379       227 RDIGSSYLPSELQAAYLWAQLE----QADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-D  301 (376)
T ss_pred             eeecccCCccHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-C
Confidence                 12233344333333343    355565666666666777776643   11111  111  11 2345666543 2


Q ss_pred             CHHHHHHHHHHhcCeEEeCCCcc----------C--C----------CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          332 DDFEVVRWLAHRHGVVVIPGGAC----------G--C----------RGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       332 ~~~~~~~~l~~~~gi~v~~g~~~----------~--~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +.+++...|. ++||.+.+....          .  .          ...+.+-++. +++++++..++.|++++
T Consensus       302 ~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~  375 (376)
T TIGR02379       302 DRNELIKYLK-EQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL  375 (376)
T ss_pred             CHHHHHHHHH-HCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            5788888775 889987643211          0  0          2346666665 89999999999998864

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=1.4e-24  Score=203.56  Aligned_cols=287  Identities=19%  Similarity=0.136  Sum_probs=198.2

Q ss_pred             CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEec
Q 015768           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVG  141 (400)
Q Consensus        66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~  141 (400)
                      +.+....++++++++.    |.+  ..++++++++|+..++.++.++||+|+++.|+|.+....+.    ..|+++..+ 
T Consensus        59 ~~p~~~~Le~~lA~~~----g~~--~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~-  131 (388)
T PRK07811         59 GNPTRTALEEQLAALE----GGA--YGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV-  131 (388)
T ss_pred             CCccHHHHHHHHHHHh----CCC--ceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe-
Confidence            3456777888888876    443  33555677899999999999999999999999987655443    357777777 


Q ss_pred             cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                      +.      .|++.+++.+++++  |+|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+......    ....
T Consensus       132 d~------~d~e~l~~~i~~~t--klV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~----p~~~  196 (388)
T PRK07811        132 DL------SDLDAVRAAITPRT--KLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQQ----PLAL  196 (388)
T ss_pred             CC------CCHHHHHHhcCcCC--eEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccCC----chhh
Confidence            43      37899999998765  99999999999999988   8999999999999999999998654321    1233


Q ss_pred             CcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +.++++.|++|+++.+| .+.||++.++  +++.+++...+.......++...+.+...|+.    +..++++..++...
T Consensus       197 gaDivv~S~sK~l~g~~~~~gG~vv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t----l~~R~~~~~~na~~  270 (388)
T PRK07811        197 GADVVVHSTTKYIGGHSDVVGGALVTND--EELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT----LAVRMDRHSENAEA  270 (388)
T ss_pred             CCcEEEecCceeecCCCCcEEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHH
Confidence            56799999999997543 5689988765  67777776665544445555655555555554    56777788889999


Q ss_pred             HHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc---------
Q 015768          301 IREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC---------  354 (400)
Q Consensus       301 l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~---------  354 (400)
                      +.+.|++++.+. +..|.                .|-.+.+.+........++...|. =..+.+.-|...         
T Consensus       271 la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-~~~~~~s~G~~~sl~~~~~~~  349 (388)
T PRK07811        271 VAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTK-VFTLAESLGGVESLIEHPSAM  349 (388)
T ss_pred             HHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCC-cceeeccCCCCcceEeCCccc
Confidence            999999887632 22111                234566677532112223333221 112222222211         


Q ss_pred             ----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          355 ----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       355 ----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                                + .++.+|||++.   |+.+++++.|.+|+.
T Consensus       350 ~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~  387 (388)
T PRK07811        350 THASTAGSQLEVPDDLVRLSVGI---EDVADLLADLEQALG  387 (388)
T ss_pred             CcccCCHhhcCCCCCEEEEEeCC---CCHHHHHHHHHHHhh
Confidence                      0 14589999997   566778888888875

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=1.1e-24  Score=203.86  Aligned_cols=283  Identities=21%  Similarity=0.181  Sum_probs=199.1

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH---HhcCcEEEEeccC
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPC  143 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~  143 (400)
                      .+...++++.+++++    |  .+++++++|+++|+..++.++.++||+|+++.+.|.+....+   +..|+++..+ + 
T Consensus        52 np~~~~lE~~lA~l~----g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~-~-  123 (385)
T PRK08574         52 NPTLRPLEEALAKLE----G--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA-Y-  123 (385)
T ss_pred             CccHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEE-C-
Confidence            345666777777766    5  357788899999999999999999999999999999887665   4457777665 2 


Q ss_pred             CCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768          144 SSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD  222 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  222 (400)
                            ++.+.+++.+++ ++  ++|++++|+||+|.++|   +++|.++|+++|+++|+|++++.....    .....+
T Consensus       124 ------~d~~~l~~~i~~~~t--klV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l~~G  188 (385)
T PRK08574        124 ------PSTEDIIEAIKEGRT--KLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY----RPLRHG  188 (385)
T ss_pred             ------CCHHHHHHhcCccCc--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----ChhhhC
Confidence                  357889998876 55  99999999999999999   889999999999999999999643321    122345


Q ss_pred             cEEEEeccccccCCCcc-eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      .++++.|++|+++.+|- -.|+++..+  +++.+++...+......++++..+.+...++.    +..+.++..+++..+
T Consensus       189 aDivv~S~sK~l~g~~d~~gG~vi~~~--~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t----L~~R~~~~~~na~~l  262 (385)
T PRK08574        189 ADFVVHSLTKYIAGHNDVVGGVAVAWS--GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT----LEVRFERQCRNAMAI  262 (385)
T ss_pred             CcEEEeeCceeecCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHHHHHHHH
Confidence            68999999999974553 357666554  67888887666655556666666655555554    667788888899999


Q ss_pred             HHHhccCCCCc-ccCC------------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCccC----
Q 015768          302 REALSPLGEGA-VKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGACG----  355 (400)
Q Consensus       302 ~~~L~~~~~~~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~~----  355 (400)
                      .+.|++++.+. +..|                  ..|-.+.+.+...   .++ +..+++.-.+.   +.-|....    
T Consensus       263 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~---~~~-~~~~~~~l~l~~~~~s~G~~~sl~~~  338 (385)
T PRK08574        263 AEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG---RDA-VLKFLRSLKLIKPSPSLGGVESLATY  338 (385)
T ss_pred             HHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC---HHH-HHHHHHcCCcceEccCCCCCcceeeC
Confidence            99999877532 2111                  1244556666521   222 22233322322   22222210    


Q ss_pred             -------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          356 -------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 -------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                         .++.+|||++.   |+.+++++.|.+|+.+
T Consensus       339 ~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~  384 (385)
T PRK08574        339 PVKSAASPIPEEDRKALGITEDLVRLSVGL---EDVEDLIEDLDQALGS  384 (385)
T ss_pred             CCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence                               13579999997   6677888888888864

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.94  E-value=4.3e-24  Score=204.71  Aligned_cols=357  Identities=15%  Similarity=0.070  Sum_probs=236.6

Q ss_pred             hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCC-----CC-CCCcHHHHHHHHHHHHhhcC
Q 015768           13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY-----GA-DEGLPELRDALVKKLNQENK   86 (400)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y-----~~-~~g~~~~~~~~a~~l~~~~~   86 (400)
                      ..+.....-+...-+.+++.++|..+++..  +|.|++++...+.+....++     .. ....+.+.+...+.+++.+|
T Consensus        17 ~~d~~~~~~~~~~~~~~~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~   94 (452)
T PTZ00094         17 EADPELYELIEKEKERQIEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG   94 (452)
T ss_pred             hhCHHHHHHHHHHHHHHHcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence            333444444444445567889998888775  58899999888865321111     11 11123333334456777778


Q ss_pred             CCCCcEEEe---CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh----------cCcEEEEeccCCCCCCCCCHH
Q 015768           87 LYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----------TGVTHILVGPCSSKTLHPDAD  153 (400)
Q Consensus        87 ~~~~~i~~~---~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~e  153 (400)
                      .+++++.++   +|+++++..++.++.++||+|++....|.++......          .++++..+ +.+.+| .+|++
T Consensus        95 a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~-~~~~~g-~id~~  172 (452)
T PTZ00094         95 LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPY-QVNEKG-LIDYD  172 (452)
T ss_pred             CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeec-ccCCCC-CcCHH
Confidence            888887666   7899999999999999999999998888776543321          11344455 566554 68999


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA  233 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~  233 (400)
                      ++++.++... ++++++.  ++.+|...|   +.+|.++|+++|+++++|++|+.+............+.+++++|++|+
T Consensus       173 ~L~~~l~~~~-~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~  246 (452)
T PTZ00094        173 KLEELAKAFR-PKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKS  246 (452)
T ss_pred             HHHHHHHHhC-CCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccC
Confidence            9999996432 4777654  345999999   888889999999999999999866553321111112578999999998


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHh----h-ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          234 YGMMGWRVGYIAYPSEVEGFATQLLKV----Q-DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~----~-~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      ++  |.+.|++..++   ++.+.+...    . .....+++.....++..+++.. ....+++.+++.++++++.+.|++
T Consensus       247 l~--GP~Gg~l~~~~---~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~  321 (452)
T PTZ00094        247 LR--GPRSGLIFYRK---KVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEK  321 (452)
T ss_pred             CC--CCCceEEEEec---ccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence            84  33347777763   332222211    1 1112255666667777777653 233567788899999999999987


Q ss_pred             CCCCcccCCC-CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe-CCCccC----CCCeEEEEecc-CC----HHHHHHHH
Q 015768          308 LGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACG----CRGHLRISFGG-LV----EDDCKAAA  376 (400)
Q Consensus       308 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-~g~~~~----~~~~iRi~~~~-~~----~~~~~~~~  376 (400)
                      .+. .+..+. ......+.+.....+...+...| +++||.+. ++..+.    .++++|++++. ++    ++|++.++
T Consensus       322 ~g~-~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~  399 (452)
T PTZ00094        322 RGY-DLVTGGTDNHLVLVDLRPFGITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVA  399 (452)
T ss_pred             CCc-EEecCCCCCceEeecCCcCCCCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHH
Confidence            643 443321 12345555554334667777765 57899994 444432    35799999976 44    89999999


Q ss_pred             HHHHHHHHHH
Q 015768          377 DRLRRGLEEL  386 (400)
Q Consensus       377 ~~l~~~l~~~  386 (400)
                      +.|.+++...
T Consensus       400 ~~l~~~~~~~  409 (452)
T PTZ00094        400 DFLDRAVKLA  409 (452)
T ss_pred             HHHHHHHHHH
Confidence            9999999854

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.94  E-value=2.7e-24  Score=200.28  Aligned_cols=280  Identities=23%  Similarity=0.203  Sum_probs=199.8

Q ss_pred             CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEec
Q 015768           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (400)
Q Consensus        66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~  141 (400)
                      +.+....++++++++.       .++.++++++++|+..++.++.++||+|+++.|+|+++...+    +..|++++.+ 
T Consensus        49 ~~p~~~~Le~~lA~l~-------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v-  120 (366)
T PRK07582         49 SNPTWRALEAALGELE-------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREA-  120 (366)
T ss_pred             CCccHHHHHHHHHHHc-------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEE-
Confidence            4566778888888775       245667777789999999999999999999999998876544    4579999988 


Q ss_pred             cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                      +.+++.     +    .+.+++  ++|++++|+||+|.+.+   +++|+++|+++|+++++|++|.... +..+   ...
T Consensus       121 ~~~~~~-----~----~~~~~t--~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~~~p---~~~  182 (366)
T PRK07582        121 PTAGMA-----E----AALAGA--DLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-GQRP---LEL  182 (366)
T ss_pred             CCCChH-----H----HhccCc--eEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-ccCc---hhc
Confidence            654321     1    122344  99999999999999988   9999999999999999999986321 1111   223


Q ss_pred             CcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       222 ~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +.+++++|++|+++ .+|+++||++.++  +++.+++...+......++++..+.+...++.    +..+.++..+++..
T Consensus       183 g~Divv~S~sK~l~G~~g~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----l~~R~~~~~~na~~  256 (366)
T PRK07582        183 GADLVVASDTKALTGHSDLLLGYVAGRD--PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----LGLRFARQCANALA  256 (366)
T ss_pred             CCcEEEecccccccCCCCeeEEEEEcCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----HHHHHHHHHHHHHH
Confidence            45689999999994 4678999999765  68888888776655666777877777777764    56677888899999


Q ss_pred             HHHHhccCCCCc-ccC------C----------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe---CCCcc------
Q 015768          301 IREALSPLGEGA-VKG------G----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI---PGGAC------  354 (400)
Q Consensus       301 l~~~L~~~~~~~-~~~------~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~---~g~~~------  354 (400)
                      +.+.|++++.+. +..      |          ..+-.+.+.+.    +.++... +++..++...   -|...      
T Consensus       257 la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~-~~~~l~~~~~~~s~G~~~sl~~~~  331 (366)
T PRK07582        257 VAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAER-FVAASRLVVAATSFGGVHTSADRR  331 (366)
T ss_pred             HHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHH-HHHhCCcceecccCCCccchhhhH
Confidence            999999887632 221      2          02345556664    2444444 4456666543   11111      


Q ss_pred             ---C---CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          355 ---G---CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       355 ---~---~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                         +   .++.||+|++.   |+.++.++.|+++++.
T Consensus       332 ~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~  365 (366)
T PRK07582        332 ARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA  365 (366)
T ss_pred             HHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence               0   13579999997   4556777888888764

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.94  E-value=2.3e-24  Score=201.50  Aligned_cols=283  Identities=20%  Similarity=0.166  Sum_probs=204.0

Q ss_pred             HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCC
Q 015768           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTL  148 (400)
Q Consensus        73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~  148 (400)
                      .++++++.+++.+|.  ++++++++++.++..++. +.++||+|+++.+.|.++...    ++..|++++.+ +.+    
T Consensus        48 ~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-d~~----  119 (378)
T TIGR01329        48 TRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHV-DTT----  119 (378)
T ss_pred             HHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEe-CCC----
Confidence            356666666666675  567777777889988776 779999999999999887653    45679999888 542    


Q ss_pred             CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                        |++.+++.+++++  |+|++++|+||+|.+.+   +++|+++|+++|+++|+|+++.....    ......+.+++++
T Consensus       120 --d~~~le~~i~~~t--klv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~----~~~l~~g~Di~v~  188 (378)
T TIGR01329       120 --DLDKVKAALGPKT--KLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL----CNPLELGADIVYH  188 (378)
T ss_pred             --CHHHHHHhcCcCc--eEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc----CChhhcCCcEEEE
Confidence              7889999998665  99999999999999999   99999999999999999999863322    1122335679999


Q ss_pred             ccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          229 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       229 s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      |++|+++. .+...|+++.++  +++.+++...+.......++...+.+...++    .+..+.++..+++..+.+.|++
T Consensus       189 S~tK~l~G~~~~~~G~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~----tl~~R~e~~~~na~~la~~L~~  262 (378)
T TIGR01329       189 SATKFLAGHSDVMAGVLAVKG--EEIAKKVYFLQNSTGSGLAPFDCWLLLRGIK----TLAIRIEKQQENARAIAMFLST  262 (378)
T ss_pred             ecceeccCCccceeEEEEeCc--HHHHHHHHHHHHhcCCcCCHHHHHHHHccCC----CHHHHHHHHHHHHHHHHHHHHh
Confidence            99999953 346789998764  5676777766653444455554444333443    3677888888888888888887


Q ss_pred             CCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---------------
Q 015768          308 LGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------------  355 (400)
Q Consensus       308 ~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------------  355 (400)
                      ++.+. +..|                ..+..+.+.+. ......+++..| +..++.++-|....               
T Consensus       263 ~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-~~~~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~  340 (378)
T TIGR01329       263 HPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-SVALSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPA  340 (378)
T ss_pred             CCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-CHHHHHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCH
Confidence            66521 1111                12345556663 221256777777 57788887776541               


Q ss_pred             --------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          356 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                              .++.+|||++.   |+.+++++.|.++|.+
T Consensus       341 ~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~  375 (378)
T TIGR01329       341 EVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT  375 (378)
T ss_pred             HHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence                    13689999997   6777888899998874

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.94  E-value=1.1e-23  Score=197.62  Aligned_cols=310  Identities=14%  Similarity=0.100  Sum_probs=215.3

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~  123 (400)
                      +++.++++.+.+..+..  + ..+...++++++++++    |.  +++++++|+|+|+..++.++ .++||+|+++.++|
T Consensus        13 ~~~e~~~~~~~l~~~~~--~-~g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~   83 (379)
T PRK11658         13 GDEELAAVKEVLRSGWI--T-TGPKNQALEQAFCQLT----GN--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLTW   83 (379)
T ss_pred             CHHHHHHHHHHHHcCCc--c-CCHhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcH
Confidence            36668888888876432  2 3445788888888887    54  46888999999999999999 79999999999999


Q ss_pred             cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      .++...+...|++++.+ +.+++++.+|++.+++.+++++  |+|+   |+|++|...+   +.+|.++|++||+++|+|
T Consensus        84 ~~~~~~~~~~G~~~v~v-d~~~~~~~~d~~~l~~~i~~~t--kav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D  154 (379)
T PRK11658         84 VSTLNMIVLLGATPVMV-DVDRDTLMVTPEAIEAAITPRT--KAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED  154 (379)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcccCC--eEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence            99999999999999999 8888888899999999998765  8887   5667999998   888999999999999999


Q ss_pred             ccccccc-cCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------------
Q 015768          204 NTYEYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------------  264 (400)
Q Consensus       204 ~a~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~------------------  264 (400)
                      ++++.+. +.+... . ..+.+++.++.+|.+  ++.+.|++++++  +++.++++..+...                  
T Consensus       155 ~a~a~g~~~~~~~~-g-~~g~~~~Sf~~~K~l--~~g~GG~v~~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~  228 (379)
T PRK11658        155 AAHAVGTYYKGRHI-G-ARGTAIFSFHAIKNI--TCAEGGLVVTDD--DELADRLRSLKFHGLGVDAFDRQTQGRAPQAE  228 (379)
T ss_pred             CCCccCCeECCeec-C-CCCCEEEeCCCCCcC--cccCceEEEECC--HHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence            9998543 322211 1 122344444455665  456788888776  77877776543211                  


Q ss_pred             ------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----Cc-eEEEeeCCCC--CC
Q 015768          265 ------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARLPEK--HL  331 (400)
Q Consensus       265 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~-~~~~~~~~~~--~~  331 (400)
                            ++.++  ...|+....+  .+.+++..++.+++.+++.+.|++++...+..+.    .. ....+.++..  ..
T Consensus       229 ~~~~G~n~~~~--~l~AAl~~~q--l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (379)
T PRK11658        229 VLTPGYKYNLA--DINAAIALVQ--LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGI  304 (379)
T ss_pred             eeccccccCcC--HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccC
Confidence                  11122  1222222222  2446777788888888999999987653332221    12 2233444421  23


Q ss_pred             CHHHHHHHHHHhcCeEEeCCCcc-C--------------------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          332 DDFEVVRWLAHRHGVVVIPGGAC-G--------------------CRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       332 ~~~~~~~~l~~~~gi~v~~g~~~-~--------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +.+++.+.|. ++||.+...... .                    ....+.+-++. +++++++..++.|++++
T Consensus       305 ~r~~~~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  377 (379)
T PRK11658        305 SRDALMEALK-ERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA  377 (379)
T ss_pred             CHHHHHHHHH-HCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence            5778888875 789876532100 0                    02346655555 89999999999998875

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.94  E-value=7.5e-24  Score=202.26  Aligned_cols=348  Identities=13%  Similarity=0.084  Sum_probs=228.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+.......  ....+...++++.|.+...-..+.++|+++|++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e  117 (433)
T PRK08117         40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG--VIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIE  117 (433)
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc--ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHH
Confidence            4678899998875  3454 7899999999998763222111  112345566677666655323468999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCc-------------EEEEeccCCCCC---CC--------CCHHHHH
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGV-------------THILVGPCSSKT---LH--------PDADWLE  156 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~---~~--------~~~e~l~  156 (400)
                      .+++...  ....+|+....+|++...... ..+.             .+..+ |.....   ..        .++++++
T Consensus       118 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~  196 (433)
T PRK08117        118 GALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQA-PYPYCDRCPKGEDPEVCFLECLRDLE  196 (433)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEe-CCCccccccccCchhHHHHHHHHHHH
Confidence            9999743  223678888888888664332 1110             11222 221100   00        1456677


Q ss_pred             Hhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccc
Q 015768          157 KTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSK  232 (400)
Q Consensus       157 ~~l~~---~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK  232 (400)
                      +.++.   ...+.+|+++..+...|.+ .+.++++++.++|++||+++|+||+|.++...+........+....+.+++|
T Consensus       197 ~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK  276 (433)
T PRK08117        197 SLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAK  276 (433)
T ss_pred             HHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhh
Confidence            76642   2336778777667777775 5888999999999999999999999998755553322112222233568999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----  308 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----  308 (400)
                      .+| +|+++|+++.+   +++.+.+.......+++.+++.+.++.+.|+..++  ....++++++.+++++.|+++    
T Consensus       277 ~lg-~G~pigav~~~---~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~  350 (433)
T PRK08117        277 GIA-SGLPLSAVVAS---KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLEVLKEKH  350 (433)
T ss_pred             hcc-CCCcceeEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            998 89999999998   78877775555566778899999999999885221  234455566666666666653    


Q ss_pred             CCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          309 GEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      +.+.-+... +.++.+.+....     .....+...++ ++||.+.+...  ..+.+|++++. +|++++++++++|.++
T Consensus       351 ~~~~~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l~~~  426 (433)
T PRK08117        351 PVIGDVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDILDEA  426 (433)
T ss_pred             CceeeeecC-CcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence            221112222 556666653210     11334555554 79999876321  25799999765 7999999999999999


Q ss_pred             HHHHh
Q 015768          383 LEELV  387 (400)
Q Consensus       383 l~~~~  387 (400)
                      ++++.
T Consensus       427 l~~~~  431 (433)
T PRK08117        427 LTEYE  431 (433)
T ss_pred             HHHHh
Confidence            98764

>PRK05968 hypothetical protein; Provisional

Probab=99.94  E-value=6.6e-24  Score=199.19  Aligned_cols=282  Identities=18%  Similarity=0.122  Sum_probs=200.6

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~  145 (400)
                      ...+++.++++.    |.+  ..+++++++.|+..++.++.+|||+|+++.+.|.+..    ..++..|++++++ +.+ 
T Consensus        65 ~~~le~~lA~l~----g~~--~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~-  136 (389)
T PRK05968         65 VRAFEEMLAKLE----GAE--DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYV-DGR-  136 (389)
T ss_pred             HHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEe-CCC-
Confidence            445555555554    653  3455677789999999999999999999999998754    4556679998888 432 


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                           |++.+++.+ +++  ++|++++|+|+++.+.+   +++|.++|++||+++|+|++|..+.+...    ...+.++
T Consensus       137 -----d~~~l~~~i-~~t--klV~ie~pt~~~~~~~d---l~~i~~la~~~gi~vivD~a~a~~~~~~p----~~~g~Di  201 (389)
T PRK05968        137 -----DEEAVAKAL-PGA--KLLYLESPTSWVFELQD---VAALAALAKRHGVVTMIDNSWASPVFQRP----ITLGVDL  201 (389)
T ss_pred             -----CHHHHHHhc-ccC--CEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcchhccCc----hhcCCcE
Confidence                 788898887 444  89999877777665555   99999999999999999999986553321    2234578


Q ss_pred             EEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       226 ~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  303 (400)
                      ++.|++|.++.+| .+.|+++.+   +++++++..... .....++++..+.+...|+.    +..+.++..+++.++.+
T Consensus       202 vv~S~tK~l~g~~~~~gG~i~~~---~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t----l~~r~~~~~~~a~~la~  274 (389)
T PRK05968        202 VIHSASKYLGGHSDTVAGVVAGS---KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT----LPLRMKAHEASALEIAR  274 (389)
T ss_pred             EEeeccccccCCCCeEEEEEEEC---HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc----HHHHHHHHHHHHHHHHH
Confidence            8999999997544 578988877   677777765432 22345666666666666654    57778888888999999


Q ss_pred             HhccCCCCcc-cCC-----------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----------------
Q 015768          304 ALSPLGEGAV-KGG-----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------------  355 (400)
Q Consensus       304 ~L~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------------  355 (400)
                      .|++++.+.. ..|           ..+.++.+.+... .+..++++.| +..++.+.-|..+.                
T Consensus       275 ~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-~~~~~f~~~L-~~~~~~~s~G~~~slv~p~~~~~~~~~~~~  352 (389)
T PRK05968        275 RLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-IDVRAFADAL-KLFRLGVSWGGHESLVVPAEVVLQQKAQPN  352 (389)
T ss_pred             HHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-HHHHHHHHhC-CccEEecCCCCCCceeeeCcccccccCCHH
Confidence            9999887533 223           1133556666532 2466777766 36676665555443                


Q ss_pred             -------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 -------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 -------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                             .++.+|+|++.   |+.+++++.|++++...
T Consensus       353 ~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~~  387 (389)
T PRK05968        353 SAARFGVSPRSVRLHVGL---EGTEALWADLEQALAAA  387 (389)
T ss_pred             HHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHh
Confidence                   14689999997   56667888888888753

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.94  E-value=3.8e-24  Score=187.95  Aligned_cols=322  Identities=17%  Similarity=0.154  Sum_probs=221.2

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (400)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~  119 (400)
                      +-.++.|+++++|.++-..+ ...|    |.++..+++.+++++.+|.  ..++|++++|+++..++.+.++||+.|++.
T Consensus         8 n~~g~~~~m~eam~~a~~~~-~~~Y----G~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~   80 (342)
T COG2008           8 NVAGPTPEMREALAAANAVG-DDVY----GEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICH   80 (342)
T ss_pred             ccCCCCHHHHHHHHhccccC-CCCC----CCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEe
Confidence            33467899999998876422 2335    4556666777777766674  889999999999999999999999999999


Q ss_pred             CCCccchhH--HHHhcC-cEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          120 APYYFNSYM--SFQMTG-VTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       120 ~p~~~~~~~--~~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      .-.|....+  .+...+ ...+.+ ...++ ..+++|+++..+..    +....++++.+.+|..|.++|.++|++|.++
T Consensus        81 ~~aHi~~~E~Ga~~~~~~~~~~~~-~~g~~-Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~  158 (342)
T COG2008          81 ETAHIYTDECGAPEFFGGGQKLPI-VPGAD-GKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV  158 (342)
T ss_pred             ccccceecccCcHHHHcCCceecc-CCCCC-CCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHH
Confidence            999966663  233333 444433 22234 47899999998872    2223455555566688999999999999999


Q ss_pred             HHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc--
Q 015768          193 CKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA--  268 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~--  268 (400)
                      |++||+.|+.|.+......  .+..........|++..++||..+.+   +|.|+.-+  .++++++..++.......  
T Consensus       159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~---~gAiv~gn--~~~~~~a~~~rK~~Ggl~~k  233 (342)
T COG2008         159 CKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAP---VGAIVFGN--RDFAKRARRWRKRAGGLMRK  233 (342)
T ss_pred             HHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcce---eeeEEEcC--HHHHHHHHHHHHHhcccHhh
Confidence            9999999999998764332  22222222345678888899987644   47766655  788888877665444433  


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                      ..+.......+|++. -| .....+-...+.+|.+.|++.++.++..|...+.++++++....+......++. ..|+++
T Consensus       234 ~r~laA~~~~~l~~~-~~-~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~~~~~~~-~~~~~~  310 (342)
T COG2008         234 ARFLAAQGLYALEDD-VW-RLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALRLAGALF-YRGVLI  310 (342)
T ss_pred             hhHHHHHHHHHHhcc-HH-HHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHHHHHHhhchhh-eeeeec
Confidence            334444445555542 12 222333444589999999977666777665589999999864323333333332 455555


Q ss_pred             eCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          349 IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       349 ~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      .++.     .-+|+.++. ++++|++++++.+++++
T Consensus       311 ~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         311 GAHG-----EIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             cCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence            4422     478999998 89999999998888764

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.94  E-value=9.1e-24  Score=201.06  Aligned_cols=345  Identities=13%  Similarity=0.081  Sum_probs=225.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+.....+.  .-..+.+.++++.+.+......+.++|+++|++|++
T Consensus        39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e  116 (423)
T PRK05964         39 ADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVE  116 (423)
T ss_pred             CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            4678899998875  4454 6899999999998764321110  112344566777776654323468999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCCC-CCCCHHHHHHhhcc
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKT-LHPDADWLEKTLET  161 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~-~~~~~e~l~~~l~~  161 (400)
                      .+++....       +| .+|+....+|++..........             .+..+ |..... ...+++.+++.+..
T Consensus       117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~l~~~l~~  195 (423)
T PRK05964        117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTA-PFPPDGYEQATLDALEALLEK  195 (423)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEe-CCCcchhHHHHHHHHHHHHHh
Confidence            99997631       23 6899999999987644322111             11222 222110 01127888888863


Q ss_pred             -CCCCeEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          162 -KPTPKLVSVVN-PGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       162 -~~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                       ...+.+|+++. .++.+|.. ++.+++++|.++|++||+++|+||++.++...+........+....+.+++|+++.++
T Consensus       196 ~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~  275 (423)
T PRK05964        196 HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGY  275 (423)
T ss_pred             CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCc
Confidence             23356777775 47777865 4899999999999999999999999987754443221111222222347789997333


Q ss_pred             ceeEEEEccCCcHHHHHHHHHh------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC---C
Q 015768          239 WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL---G  309 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~  309 (400)
                      +++|+++.+   +++.+.+...      ....+++.++++..++.+.|+.-++  .+..++..++.+++++.|+++   +
T Consensus       276 ~p~~av~~~---~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~~l~~~~  350 (423)
T PRK05964        276 LPLAATLCT---AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED--EPVLERVAALSAGLAEGLEPFRDLP  350 (423)
T ss_pred             ccceEEEEc---HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHhhccCC
Confidence            899999988   7888777531      2345677899999888888873111  234455555566666666554   2


Q ss_pred             CCcccCCCCceEEEeeCCCCCC--CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          310 EGAVKGGEGAIYLWARLPEKHL--DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+.-.... +.++.+.+.....  ....+...+. ++||.+.+.     .+.+|++++. +|++|++.++++|.++++++
T Consensus       351 ~i~~vrg~-Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~-----~~~lR~~p~l~~t~edId~~v~~l~~al~~~  423 (423)
T PRK05964        351 GVADVRVL-GAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPL-----GNTIYLMPPYIITAEELDRITDAIVEVADEL  423 (423)
T ss_pred             CeEEeecc-cEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence            22112233 5666666653210  1456676665 799999863     3589999886 89999999999999999763

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.94  E-value=1.2e-23  Score=196.55  Aligned_cols=302  Identities=17%  Similarity=0.133  Sum_probs=210.9

Q ss_pred             HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhH
Q 015768           50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYM  128 (400)
Q Consensus        50 ~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~  128 (400)
                      +++.+.+.++.   |.......++++.+++++    |  .+++++++|+|+|+..++.++ .++||+|+++.++|++...
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~----~--~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~   73 (352)
T cd00616           3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYL----G--VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN   73 (352)
T ss_pred             HHHHHHHHcCC---ccCCHHHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH
Confidence            45666666542   333445677888888877    4  357888999999999999998 5899999999999999999


Q ss_pred             HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 015768          129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY  208 (400)
Q Consensus       129 ~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~  208 (400)
                      .++..|++++.+ +.+++++.+|++.+++.+++++  ++|+++   |++|...+   +++|.++|+++|+++|+|++|+.
T Consensus        74 ~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~  144 (352)
T cd00616          74 AILLLGATPVFV-DIDPDTYNIDPELIEAAITPRT--KAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL  144 (352)
T ss_pred             HHHHcCCeEEEE-ecCCCcCCcCHHHHHHhcCcCC--eEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence            999999999999 8876567889999999987655  888876   46899988   88888999999999999999985


Q ss_pred             cccCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC---------------CcCccHH
Q 015768          209 FMYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------------PICASII  271 (400)
Q Consensus       209 ~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~  271 (400)
                      +.......  .....++.+.|++  |+++  +.+.|+++.++  +++.++++......               +..++.+
T Consensus       145 g~~~~~~~--~~~~~d~~~~S~~~~K~~~--~~~gg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (352)
T cd00616         145 GATYKGRK--VGTFGDAGAFSFHPTKNLT--TGEGGAVVTND--EELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEI  218 (352)
T ss_pred             CCeECCEE--cccCcceeEEcCCCCCCCc--ccCceEEEECC--HHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHH
Confidence            43211110  1111245667765  9884  33568888775  57777665543211               1122333


Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-----CceEEEeeCCCC-CCCHHHHHHHHHHhcC
Q 015768          272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-----GAIYLWARLPEK-HLDDFEVVRWLAHRHG  345 (400)
Q Consensus       272 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~l~~~~g  345 (400)
                      ....+...+    +.+++..++.+++.+++++.|++++++.+..+.     ....+.+.++.. ..+..++...|. ++|
T Consensus       219 ~aa~~~~~l----~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~-~~g  293 (352)
T cd00616         219 QAAIGLAQL----EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALK-EAG  293 (352)
T ss_pred             HHHHHHHHH----HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHH-HCC
Confidence            333322222    235677778888999999999998765555332     124455556531 236788888775 789


Q ss_pred             eEEeCCCccC----------------C-------CCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          346 VVVIPGGACG----------------C-------RGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       346 i~v~~g~~~~----------------~-------~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                      |.+.......                .       .+.+|++++. +|++|++.++++|+
T Consensus       294 I~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         294 IETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             CCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence            9764322110                0       2589999998 99999999988774

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.94  E-value=6e-24  Score=197.89  Aligned_cols=283  Identities=16%  Similarity=0.106  Sum_probs=201.8

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~  145 (400)
                      ...+++.++++.    |  .+++++++|+++|+..++.++.++||+|+++++.|++....    ++..|+++..+ +.. 
T Consensus        52 ~~~lE~~lA~l~----g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~-d~~-  123 (377)
T TIGR01324        52 HFALQDAMCELE----G--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYY-DPL-  123 (377)
T ss_pred             HHHHHHHHHHHh----C--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEE-CCC-
Confidence            356677777665    4  46899999999999999999999999999999999876643    35678887776 321 


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                           +.+.+++.+++++  |+|++++|+||+|.+.+   +++|+++|+++|+++|+|++|+.....    .....+.++
T Consensus       124 -----~~e~l~~~i~~~t--klV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~----~pl~~gaDi  189 (377)
T TIGR01324       124 -----IGEDIATLIQPNT--KVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF----KPLEHGVDI  189 (377)
T ss_pred             -----CHHHHHHhcCCCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc----CccccCceE
Confidence                 2378888888766  99999999999999888   999999999999999999999854432    234567789


Q ss_pred             EEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       226 ~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ++.|++|++|. ++...|+++.+   ++..+++...........++...+.+...++.    +..+++++.+++..+.+.
T Consensus       190 vv~S~tK~l~G~~d~~gG~v~~~---~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t----l~~R~~~~~~~a~~la~~  262 (377)
T TIGR01324       190 SIQAGTKYLVGHSDIMIGTVVAN---ARTWDQLREHSYLMGQMVDADDAYTTLRGLRT----LGVRLKQHQESSLAIAKW  262 (377)
T ss_pred             EEecCceeccCCCCceEEEEEeC---HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHH
Confidence            99999999963 34678988887   66666666544444555666666665555553    667788889998899999


Q ss_pred             hccCCCC-cccCC----------------CCceEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccC-----------
Q 015768          305 LSPLGEG-AVKGG----------------EGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG-----------  355 (400)
Q Consensus       305 L~~~~~~-~~~~~----------------~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------  355 (400)
                      |++++.+ +++.|                ..+-.+.+++.. ......++.+.| +-.++.+.-|....           
T Consensus       263 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l-~~~~~~~slG~~~sl~~~~~~~~~~  341 (377)
T TIGR01324       263 LSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHL-QLFGLGYSWGGYESLALCNQPELGH  341 (377)
T ss_pred             HHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC-CcceEeccCCCccceeecCCCCCCH
Confidence            9987653 22222                124455566643 111234555544 34444443333211           


Q ss_pred             --------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          356 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                              .++.+|||++.   |+.+++++.|.+++..
T Consensus       342 ~~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~~  376 (377)
T TIGR01324       342 RPNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFEA  376 (377)
T ss_pred             HHHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHhc
Confidence                    13579999997   6677888888888864

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.94  E-value=1.2e-23  Score=200.90  Aligned_cols=343  Identities=15%  Similarity=0.098  Sum_probs=223.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+...  +.......+.+.++++.+.+..... .+.+++++++++|+
T Consensus        53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~  130 (443)
T PRK06058         53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTH--TCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAV  130 (443)
T ss_pred             CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence            4578899998875  4443 789999999999876321  1112223456667777776665322 35899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C--------c-----EEEEeccC--CCCC---CCC--------CHH
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G--------V-----THILVGPC--SSKT---LHP--------DAD  153 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g--------~-----~~~~~~~~--~~~~---~~~--------~~e  153 (400)
                      +.+++...  ...++|+...++|++........ +        .     .+..+ |.  ..+.   ...        ..+
T Consensus       131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  209 (443)
T PRK06058        131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRA-PMSYPYRDPKGLATDGEEAAARAIT  209 (443)
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEc-CCCcccccccccccchHHHHHHHHH
Confidence            99999543  23378999999999987443321 1        0     11112 11  1000   000        122


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEecc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSF  230 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~  230 (400)
                      .+++.+..+ .+++|+++..+...|.. .+.+++++|.++|++||+++|.||++.++...+..+.....  ..+++  ++
T Consensus       210 ~l~~~~~~~-~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv--~~  286 (443)
T PRK06058        210 VIEKQVGAD-NLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI--TT  286 (443)
T ss_pred             HHHHhhCCC-ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE--EE
Confidence            233333322 35777766445555665 57889999999999999999999999987654432211111  12333  45


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC--
Q 015768          231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL--  308 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  308 (400)
                      +|.+| +|+++|+++.+   +++.+.+.......+++.+++++.++.+.|+...+  .+..++..++.+++.+.|+++  
T Consensus       287 gK~l~-~G~Pi~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~  360 (443)
T PRK06058        287 AKGIA-GGLPLSAVTGR---AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEE--DDLVARARQIEALMTDRLRALAA  360 (443)
T ss_pred             ccccc-CCCccEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHh
Confidence            79998 89999999998   78887776555667889999999999999975221  234555666666776666653  


Q ss_pred             --CCCcccCCCCceEEEeeCCCC--CC-C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          309 --GEGAVKGGEGAIYLWARLPEK--HL-D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       309 --~~~~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                        +.+.-+.+. |.++.+.+...  .. +   ...+...++ ++||.+.++..+  .+++|+.+.. .|++++++++++|
T Consensus       361 ~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l  436 (443)
T PRK06058        361 EDDRIGDVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVL  436 (443)
T ss_pred             hCCcEEeeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence              332234455 44444444211  11 1   234555554 799999886543  3789998776 8999999999999


Q ss_pred             HHHHHH
Q 015768          380 RRGLEE  385 (400)
Q Consensus       380 ~~~l~~  385 (400)
                      .+++++
T Consensus       437 ~~~l~~  442 (443)
T PRK06058        437 EAALAD  442 (443)
T ss_pred             HHHHHh
Confidence            999875

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.94  E-value=8.3e-24  Score=200.03  Aligned_cols=287  Identities=19%  Similarity=0.230  Sum_probs=194.8

Q ss_pred             HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCC
Q 015768           74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLH  149 (400)
Q Consensus        74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~  149 (400)
                      .+.+++.++++.|  .+..++++|++.|+..++.++.++||+|+++.+.|.+...    .++..|++++++ +..     
T Consensus        66 ~~~Le~~lA~leg--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v-d~~-----  137 (431)
T PRK08248         66 TDVFEKRIAALEG--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV-DPS-----  137 (431)
T ss_pred             HHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEE-CCC-----
Confidence            3344444444445  4678899999999999999999999999999999977543    456789999988 542     


Q ss_pred             CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768          150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS  229 (400)
Q Consensus       150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s  229 (400)
                       |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|+++....    .......+.++++.|
T Consensus       138 -d~e~l~~ai~~~t--klV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~----~~~pl~~gaDivv~S  207 (431)
T PRK08248        138 -DPENFEAAITDKT--KALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY----LLRPIEHGADIVVHS  207 (431)
T ss_pred             -CHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc----cCChhHcCCCEEEEc
Confidence             7889999998765  99999999999999999   8899999999999999999987321    112234578899999


Q ss_pred             cccccCCCcceeEEEEccCCcHHH-------------------------------HHHHHHhhccCCcCccHHHHHHHHH
Q 015768          230 FSKAYGMMGWRVGYIAYPSEVEGF-------------------------------ATQLLKVQDNIPICASIISQHLALY  278 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~~~~-------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~  278 (400)
                      ++|++|.+|.++|+++..+....+                               .+.............++...+.+..
T Consensus       208 ~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r  287 (431)
T PRK08248        208 ATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ  287 (431)
T ss_pred             CccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc
Confidence            999999888888886654210000                               0111112222334556666665555


Q ss_pred             HhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHHHHHHH
Q 015768          279 SLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEVVRWL  340 (400)
Q Consensus       279 ~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~l  340 (400)
                      .|++    +..+.+++.+++..+.+.|++++.+. +..|                . .|-.+.+.+........++++.|
T Consensus       288 gl~t----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l  363 (431)
T PRK08248        288 GLET----LHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSV  363 (431)
T ss_pred             CcCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhC
Confidence            5554    67888999999999999999887632 2211                1 14455566643211122333332


Q ss_pred             HHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          341 AHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       341 ~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                       +=..+.+.-|...                      + .++.+|||++.   |+.+++++.|.+||+..
T Consensus       364 -~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~dL~~Dl~~Al~~~  428 (431)
T PRK08248        364 -KLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT---EAIDDILDDLRQAIRQS  428 (431)
T ss_pred             -CcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence             1112222222211                      0 14579999997   67778888999988764

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.93  E-value=1e-23  Score=195.73  Aligned_cols=295  Identities=16%  Similarity=0.147  Sum_probs=206.5

Q ss_pred             CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEE
Q 015768           64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHIL  139 (400)
Q Consensus        64 y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~  139 (400)
                      |.+.....+.++.+++.++...+  .+..++++++++|+..++.++.++||+|+++.|.|+++..    .++..|+++..
T Consensus        56 y~YsR~gnPt~~~Le~~la~le~--~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~  133 (395)
T PRK05967         56 YTYGTRGTPTTDALCKAIDALEG--SAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEY  133 (395)
T ss_pred             CccCCCCChHHHHHHHHHHHHhC--CCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEE
Confidence            44445566777888888876655  2344666668999999999999999999999999998774    45778999888


Q ss_pred             eccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc
Q 015768          140 VGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~  219 (400)
                      + +.+      +.+.+++.+++++  |+|++++|+||++.+.+   +++|+++|+++|+++++|++|....+    ..+.
T Consensus       134 v-d~~------~~e~l~~al~~~T--klV~lesPsNP~l~v~d---l~~I~~la~~~g~~vvVD~t~a~p~~----~~pl  197 (395)
T PRK05967        134 Y-DPE------IGAGIAKLMRPNT--KVVHTEAPGSNTFEMQD---IPAIAEAAHRHGAIVMMDNTWATPLY----FRPL  197 (395)
T ss_pred             e-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHhCCEEEEECCccCcee----cChh
Confidence            7 432      3467899888776  99999999999887777   99999999999999999999984332    2344


Q ss_pred             CCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          220 EGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       220 ~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      ..+.++++.|.+|.++ .++.-+|+++.+   ++..+++..........+++...+.+...++.    +.-+++++.+++
T Consensus       198 ~~GaDivv~S~tKy~~Gh~d~~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T----l~lR~~~~~~na  270 (395)
T PRK05967        198 DFGVDISIHAATKYPSGHSDILLGTVSAN---EKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT----MGIRLEHHRKSA  270 (395)
T ss_pred             HcCCCEEEEecccccCCCCCeeEEEEEcC---HHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc----HHHHHHHHHHHH
Confidence            5678899999999985 245677877766   56666665544444555677776665555554    678888999999


Q ss_pred             HHHHHHhccCCCC-cccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCcc----
Q 015768          299 EIIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC----  354 (400)
Q Consensus       299 ~~l~~~L~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~----  354 (400)
                      ..+.+.|++++.+ ++..|.                .+-.+.+.+.....+..+.+.++++.-.+   .+.-|...    
T Consensus       271 ~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~  350 (395)
T PRK05967        271 LEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLAL  350 (395)
T ss_pred             HHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeee
Confidence            9999999988764 222221                23445666653200012222223333233   22222211    


Q ss_pred             ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                  + .++.+|||++.   |+.+++++.|.+++...
T Consensus       351 ~~~~~~~~~~~~~~~~~liRlSvGl---Ed~~dLi~Dl~~Al~~~  392 (395)
T PRK05967        351 HVKLGDRTVAKAPYAGPVIRLQIGL---EDVPDLKADLERGFAAA  392 (395)
T ss_pred             eCCCChhHhhhccCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                        0 13579999997   66778888888888754

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.93  E-value=6.8e-24  Score=196.80  Aligned_cols=283  Identities=18%  Similarity=0.207  Sum_probs=199.3

Q ss_pred             CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhc----CcEEEEec
Q 015768           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVG  141 (400)
Q Consensus        66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~----g~~~~~~~  141 (400)
                      +.+...+++++++++.    +  .+++++++|+++|+..++. +.++||+|+++.+.|.+....+...    +..+.   
T Consensus        52 ~~p~~~~le~~lA~le----g--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~---  121 (364)
T PRK07269         52 KNPTRAKLEETLAAIE----S--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT---  121 (364)
T ss_pred             CCccHHHHHHHHHHHh----C--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEE---
Confidence            3455677888888876    3  5789999999999999984 6689999999999997766544321    22211   


Q ss_pred             cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                            +..|++.+++.+++++  |+|++++|+||+|.+.+   +++|+++|+++|+++++|++|......    .....
T Consensus       122 ------~~~d~~~l~~~i~~~T--klV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~----~pl~~  186 (364)
T PRK07269        122 ------YANTEEELIAAIEEDT--DIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPIEL  186 (364)
T ss_pred             ------ecCCHHHHHHhcCcCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cchhh
Confidence                  1347899999998776  99999999999999998   999999999999999999997643322    12344


Q ss_pred             CcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +.++++.|++|.++..| .-.|++++++  +++.+++...+......++++..+.+...|+.    +..++++.++++..
T Consensus       187 gaDivv~S~tK~l~g~~d~~gG~v~~~~--~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t----L~~r~~~~~~na~~  260 (364)
T PRK07269        187 GADIVLHSATKYLSGHNDVLAGVVVTND--LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT----LSLRMERSTANAQE  260 (364)
T ss_pred             CCcEEEecCceeccCCCcccceEEEeCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHH
Confidence            67799999999996333 3468888765  67888877655444556778877777777765    67888889999999


Q ss_pred             HHHHhccCCCC-ccc-CCCCceEEEeeCCCCCCCHHHHHHHH---------HHhcCeEEeCCCccC-------------C
Q 015768          301 IREALSPLGEG-AVK-GGEGAIYLWARLPEKHLDDFEVVRWL---------AHRHGVVVIPGGACG-------------C  356 (400)
Q Consensus       301 l~~~L~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~gi~v~~g~~~~-------------~  356 (400)
                      +.+.|++++.+ .+. ++.++++. +.+.. .....++...+         ...+.+.+.|+...+             .
T Consensus       261 ~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~-~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~  338 (364)
T PRK07269        261 VVAFLKKSPAVKEVLYTGKGGMIS-FKVAD-ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLT  338 (364)
T ss_pred             HHHHHHhCCCccEEeCCCcCcEEE-EEECC-HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCC
Confidence            99999998763 444 44444443 44431 11122333322         112233444433221             1


Q ss_pred             CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          357 RGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       357 ~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ++.+|+|++.   |+.+++++.|.++++
T Consensus       339 ~~liRlsvGl---E~~~dli~dl~~al~  363 (364)
T PRK07269        339 DDLLRLSIGI---EDARDLIADLKQALE  363 (364)
T ss_pred             CCeEEEEecc---CCHHHHHHHHHHHhc
Confidence            4689999997   667788888888874

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.93  E-value=4.1e-23  Score=193.86  Aligned_cols=282  Identities=20%  Similarity=0.196  Sum_probs=194.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCC
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKT  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~  147 (400)
                      ...+.+.+.+++..|.+ +. +++++|+.++..++. +.++||+|+++.+.|++..    ..++..|++++.+ +.+   
T Consensus        54 p~~~~le~~lA~l~g~~-~~-v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~---  126 (390)
T PRK08064         54 PTREALEDIIAELEGGT-KG-FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFV-DMT---  126 (390)
T ss_pred             hhHHHHHHHHHHHhCCC-Ce-EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEE-CCC---
Confidence            33444444454445755 34 455666789988886 7789999999999998654    3456689999988 653   


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                         |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++++|++|..+....    ....+.++++
T Consensus       127 ---d~~~l~~~l~~~t--klV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~----~~~~g~Divv  194 (390)
T PRK08064        127 ---NLEEVAQNIKPNT--KLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK----PLDLGADVVL  194 (390)
T ss_pred             ---CHHHHHHhcCCCc--eEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC----chhhCCcEEE
Confidence               6889999888766  99999999999999999   8889999999999999999988543221    1234567999


Q ss_pred             eccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768          228 FSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       228 ~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      .|++|+++. +|...|+++..+  +++.+++...+.......++...+.+...    .+.+..++++..+++..+.+.|+
T Consensus       195 ~S~tK~~~G~~~~laG~~v~~~--~~~~~~l~~~~~~~g~~~~~~~a~l~~~g----l~tl~~R~~~~~~~a~~la~~L~  268 (390)
T PRK08064        195 HSATKFLAGHSDVLAGLAVVKD--EELAQKLYFLQNSFGAVLGVQDCWLVLRG----LKTLHVRLEHSSETANKIALYLQ  268 (390)
T ss_pred             eecceeccCCccceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcc----cCcHHHHHHHHHHHHHHHHHHHh
Confidence            999999852 345678877664  68888888777644444444444433322    33467888888999999999998


Q ss_pred             cCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCcc------------
Q 015768          307 PLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC------------  354 (400)
Q Consensus       307 ~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~------------  354 (400)
                      +++.+. +..|                ..+-.+.+.+..    .++.. .+++..++   .++-|...            
T Consensus       269 ~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~----~~~~~-~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~  343 (390)
T PRK08064        269 EHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS----EEAVR-QFVSHVKLPVFAVSLGAVESILSYPAKMSHA  343 (390)
T ss_pred             cCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC----HHHHH-HHHHhCCcceEcccCCCCcceeECCcccccc
Confidence            876421 1111                123455556642    23333 34456676   44444211            


Q ss_pred             ----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          355 ----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       355 ----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                + .++.+|+|++.   |+.++.++.|.++++++
T Consensus       344 ~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~~  383 (390)
T PRK08064        344 AMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSYV  383 (390)
T ss_pred             cCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhc
Confidence                      1 14689999997   56667788888888775

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.93  E-value=2.3e-23  Score=197.01  Aligned_cols=343  Identities=15%  Similarity=0.119  Sum_probs=219.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC---CCcEEE-eCChH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMV-TAGAN   99 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~---~~~i~~-~~g~t   99 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.... . ......+.+..+++.+.+....+   .+.++| +++++
T Consensus        32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs  109 (412)
T TIGR02407        32 EDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGII-H-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGT  109 (412)
T ss_pred             CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccce-e-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCch
Confidence            5678999998875  3444 7899999999988752111 1 11112345556666666542111   134666 48999


Q ss_pred             HHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCCC-C-CCCCHHHHHHhhccC
Q 015768          100 QAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSK-T-LHPDADWLEKTLETK  162 (400)
Q Consensus       100 ~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~-~-~~~~~e~l~~~l~~~  162 (400)
                      +|++.+++....  ...+|+....+|++....... .|.            .++.+ |.++- . ..-+++.+++.+...
T Consensus       110 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~~  188 (412)
T TIGR02407       110 NAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRM-PYDGYLGGDVDTIAYFEKLLEDS  188 (412)
T ss_pred             HHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEEC-CCCCccccchhHHHHHHHHHHhc
Confidence            999999998752  336899999999997644322 221            12223 32110 0 001466788877521


Q ss_pred             ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccC
Q 015768          163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYG  235 (400)
Q Consensus       163 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g  235 (400)
                          ..+.+|+++..+++.|. .+|.+++++|.++|++||+++|+||++.++...|..+...  .-..+  +.+++|++|
T Consensus       189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD--i~~~~K~lg  266 (412)
T TIGR02407       189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD--IVCLSKSIS  266 (412)
T ss_pred             cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC--EEEechhcc
Confidence                23578887777888898 6799999999999999999999999998664433221111  11222  336789998


Q ss_pred             CC-cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhc----cCC
Q 015768          236 MM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALS----PLG  309 (400)
Q Consensus       236 ~~-g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~----~~~  309 (400)
                       + |+++|+++.+   +++ +.+.......+++.+++...++.+.++. ..+  .+..++.++..+++++.|+    .++
T Consensus       267 -~~G~pigav~~~---~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~  339 (412)
T TIGR02407       267 -GYGLPLALTLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERLDRIVAEYP  339 (412)
T ss_pred             -CCccceeEEEEc---hhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence             6 9999999998   454 4443334556778888877766666652 111  1233334444444444443    344


Q ss_pred             CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .........|+++|+.++... ....+...+. ++||.+.+...  ..+.+|++++. +++++++.++++|.+++++
T Consensus       340 ~~~~~vrg~Gl~~~l~l~~~~-~~~~~~~~~~-~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~  412 (412)
T TIGR02407       340 ELIKQVRGRGLMQGIECGDGD-LAGKIAKAAF-ENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDILEQAVEE  412 (412)
T ss_pred             CceEeeecceeEEEEEecChH-HHHHHHHHHH-HCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence            211222334889999997531 2456666665 79999987432  25789999887 8999999999999999853

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.93  E-value=1.4e-22  Score=190.07  Aligned_cols=309  Identities=17%  Similarity=0.210  Sum_probs=212.3

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~  123 (400)
                      .++-++++.+.+..+..  |+    ...+++++++++++.+|.  +++++++|+++|+..++.++ .++||+|+++.++|
T Consensus        10 ~~~~~~~~~~~l~~~~~--~g----~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~   81 (375)
T PRK11706         10 VGTELDYIQQAMSSGKL--CG----DGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTF   81 (375)
T ss_pred             CHHHHHHHHHHHHcCCc--cC----CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCc
Confidence            35557778887765422  22    235667777777776675  68999999999999988766 68999999999999


Q ss_pred             cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      .++...++..|++++.+ +.+++++.+|++++++.+++++  ++|+++   |++|...+   +.+|.++|++||+++|+|
T Consensus        82 ~~~~~~~~~~G~~~v~~-d~d~~~~~~d~~~le~~i~~~t--k~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD  152 (375)
T PRK11706         82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIEAAITPKT--RAIVPV---HYAGVACE---MDTIMALAKKHNLFVVED  152 (375)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcCCCC--eEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEE
Confidence            99999999999999999 8988888899999999998765  888865   46898888   888999999999999999


Q ss_pred             ccccccc-cCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------------
Q 015768          204 NTYEYFM-YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----------------  264 (400)
Q Consensus       204 ~a~~~~~-~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~----------------  264 (400)
                      ++|+.+. +++.+. ...  .++.+.||+  |.++ +|.+.++++.+   +++.+++...+...                
T Consensus       153 ~a~a~g~~~~~~~~-g~~--~~~~~~Sf~~~K~l~-~g~gG~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  225 (375)
T PRK11706        153 AAQGVMSTYKGRAL-GTI--GHIGCFSFHETKNYT-AGEGGALLIND---PALIERAEIIREKGTNRSQFFRGQVDKYTW  225 (375)
T ss_pred             CccccccccCCeee-ecC--cCEEEEeCCCCcccc-ccCCeEEEECC---HHHHHHHHHHHHcCCCcchhhccCCCccee
Confidence            9999776 333221 111  234455655  9996 57666677655   78887766554311                


Q ss_pred             -CcCc----cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC---CCccc-CCC----CceEEEeeCCCCCC
Q 015768          265 -PICA----SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVK-GGE----GAIYLWARLPEKHL  331 (400)
Q Consensus       265 -~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~-~~~----~~~~~~~~~~~~~~  331 (400)
                       ..+.    +.+....+...+    +.+++..++-+++.+++.+.|++++   .+... .+.    ...++++.++.. .
T Consensus       226 ~~~g~~~~~~~~~aa~~~~ql----~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  300 (375)
T PRK11706        226 VDIGSSYLPSELQAAYLWAQL----EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-E  300 (375)
T ss_pred             eecccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-C
Confidence             0112    222222222223    3356666666777788888887764   22211 121    133556666543 3


Q ss_pred             CHHHHHHHHHHhcCeEEeCCCcc----------C------------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          332 DDFEVVRWLAHRHGVVVIPGGAC----------G------------CRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       332 ~~~~~~~~l~~~~gi~v~~g~~~----------~------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +.+++.+.|. ++||.+......          .            ....+-+-++. ++++|++..++.|++++
T Consensus       301 ~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  374 (375)
T PRK11706        301 DRSALINFLK-EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF  374 (375)
T ss_pred             CHHHHHHHHH-HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence            6788888775 789987532100          0            02345555555 78999999999988764

>PRK05939 hypothetical protein; Provisional

Probab=99.93  E-value=5e-23  Score=193.06  Aligned_cols=282  Identities=22%  Similarity=0.194  Sum_probs=190.3

Q ss_pred             HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCC
Q 015768           74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHP  150 (400)
Q Consensus        74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~  150 (400)
                      .+.+++.+++..|.  +..+++++++.|+..++.++.++||+|+++.+.|+++.   ..++..|++++.+ +..      
T Consensus        49 ~~~lE~~la~leg~--~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v-~~~------  119 (397)
T PRK05939         49 TAALEAKITKMEGG--VGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV-DAT------  119 (397)
T ss_pred             HHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE-CCC------
Confidence            33444444444453  34566666789999999999999999999999997654   3566789999888 542      


Q ss_pred             CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF  230 (400)
Q Consensus       151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~  230 (400)
                      |++++++.+++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|+++....    .......+.++++.|+
T Consensus       120 d~e~l~~~l~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~~~~gaDivv~S~  190 (397)
T PRK05939        120 DVQNVAAAIRPNT--RMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW----LFRPKDVGASLVINSL  190 (397)
T ss_pred             CHHHHHHhCCCCC--eEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc----ccCccccCCEEEEecC
Confidence            7899999998766  99999999999999988   9999999999999999999986432    1223344688999999


Q ss_pred             ccccCCCcceeEEEEccCCcHH------H-------------HHHHHH-hhccCCcCccHHHHHHHHHHhcCCcHHHHHH
Q 015768          231 SKAYGMMGWRVGYIAYPSEVEG------F-------------ATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTER  290 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~~~------~-------------~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  290 (400)
                      ||.++..|.++|+++..+...+      +             ...+.. ........+++...+.+...++.    +..+
T Consensus       191 sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t----l~~R  266 (397)
T PRK05939        191 SKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET----LALR  266 (397)
T ss_pred             eecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc----HHHH
Confidence            9999878899898766421100      0             111111 11122334555555555555554    6788


Q ss_pred             HHHHHHHHHHHHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeC
Q 015768          291 VKDLVRNREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIP  350 (400)
Q Consensus       291 ~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~  350 (400)
                      ++++.+++..+.+.|++++.+. +..|                ..|-++.+.+... .+..+++.    .-.+.   ..-
T Consensus       267 ~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~-~~~~~f~~----~l~l~~~~~s~  341 (397)
T PRK05939        267 VDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG-IDCFDFLN----RLKLVIKATHL  341 (397)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH-HHHHHHHH----hCCcceEccCC
Confidence            8888889999999999887632 2221                1245566666531 12223333    33332   111


Q ss_pred             CCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          351 GGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       351 g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      |...                      + .++.+|+|++.   |+.+++++.|++++.+
T Consensus       342 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl---Ed~~dLi~dl~~Al~~  396 (397)
T PRK05939        342 GDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI---EDEADLIADFEQALDA  396 (397)
T ss_pred             CCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHhc
Confidence            1111                      0 13589999997   6777888888888863

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.93  E-value=1.3e-22  Score=191.09  Aligned_cols=311  Identities=19%  Similarity=0.131  Sum_probs=217.2

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~  123 (400)
                      +++.++++.+.+..+.   |.......++++++++++    |.  ++.++++|+|+|+..++.++ .++||+|+++.++|
T Consensus         9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~   79 (380)
T TIGR03588         9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYV----GA--KYAVAFNSATSALHIACLALGVGPGDRVWTTPITF   79 (380)
T ss_pred             CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHH----CC--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcch
Confidence            4566788888876643   333455788999999888    43  34566778999999999999 78999999999999


Q ss_pred             cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (400)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (400)
                      .++...++..|++++++ +.+++.+.+|++++++.++    +++  ++|+++   |++|...+   +++|.++|++||++
T Consensus        80 ~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~~~t--~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~  150 (380)
T TIGR03588        80 VATANCALYCGAKVDFV-DIDPDTGNIDEDALEKKLAAAKGKLP--KAIVPV---DFAGKSVD---MQAIAALAKKHGLK  150 (380)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHhhcccCCCc--eEEEEe---CCCCccCC---HHHHHHHHHHcCCE
Confidence            99999999999999999 8877667889999999997    444  888754   56898888   89999999999999


Q ss_pred             EEEcccccccc-cCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------
Q 015768          200 LVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------  264 (400)
Q Consensus       200 li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~------------  264 (400)
                      +|+|++++.+. +.+.+. ......++.+.|++  |.++.  ...|+++..+  +++.++++..+...            
T Consensus       151 lI~D~a~a~g~~~~~~~~-g~~~~~d~~~~S~~~~K~~~~--~~GG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~  225 (380)
T TIGR03588       151 IIEDASHALGAEYGGKPV-GNCRYADATVFSFHPVKIITT--AEGGAVTTND--EELAERMRLLRSHGITKDPLLFEKQD  225 (380)
T ss_pred             EEEECCCcccCccCCEeC-CCccccceEEEecCCCCcccc--cCceEEEECC--HHHHHHHHHHHHCCCCCCcccccccc
Confidence            99999998653 332211 11012357777776  88853  2468888776  77777776543211            


Q ss_pred             -------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----Cc-eEEEeeC
Q 015768          265 -------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARL  326 (400)
Q Consensus       265 -------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~-~~~~~~~  326 (400)
                                   .+.++.+....+...|+    .+++..++-+++.+++.+.|.+++.+....+.    .. ....+.+
T Consensus       226 ~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~----~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~  301 (380)
T TIGR03588       226 EGPWYYEQQELGFNYRMTDIQAALGLSQLK----KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILL  301 (380)
T ss_pred             cCcceeeeeccccccCccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEE
Confidence                         11123333232333333    25677777788889999999988764433221    11 2233444


Q ss_pred             CC-CCCCHHHHHHHHHHhcCeEEeCCCcc-----------C---C-------CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          327 PE-KHLDDFEVVRWLAHRHGVVVIPGGAC-----------G---C-------RGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       327 ~~-~~~~~~~~~~~l~~~~gi~v~~g~~~-----------~---~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +. ...+.+++...| +++||.+.....+           .   .       ...+++.++. ++++|++..++.|++++
T Consensus       302 ~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~  380 (380)
T TIGR03588       302 DQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL  380 (380)
T ss_pred             CCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence            32 223678888877 4889988643211           0   0       1568888776 89999999999998764

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.93  E-value=1.4e-23  Score=189.02  Aligned_cols=342  Identities=17%  Similarity=0.162  Sum_probs=218.0

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcC----CCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      +.+.+.++.+.- -+.++.|++++..+...    +....|+..  .+.+..|+.+|+++    |.++.+|+||+|+|+++
T Consensus        41 ~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI----nAd~~dIiFts~ATEs~  115 (428)
T KOG1549|consen   41 GTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI----NADPSDIVFTSGATESN  115 (428)
T ss_pred             CCccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh----CCCCCcEEEeCCchHHH
Confidence            445667766541 24579999998887754    322223322  22455666666666    88888899999999999


Q ss_pred             HHHHHHhc-CCCC----EEEEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768          103 VNIVLTLC-DAGD----SVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG  174 (400)
Q Consensus       103 ~~~~~~l~-~~gd----~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~  174 (400)
                      +.++.... ..+|    +|+..+-.|+++...   ++..|++++++ |++.+| .+|++.+++.+++++  +++.|.+.+
T Consensus       116 Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~l-pv~~~~-~~d~~~~~~~i~~~T--~lv~I~~Vn  191 (428)
T KOG1549|consen  116 NLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYL-PVEDSG-LVDISKLREAIRSKT--RLVSIMHVN  191 (428)
T ss_pred             HHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEe-ccCccc-cccHHHHHHhcCCCc--eEEEEEecc
Confidence            99999985 3455    899999999887754   46678999999 998665 679999999999987  999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      |.+|+++|   +++|.++|+++|+.+++|.+|+   .+..+.....-+.+++..|.||++|++|  +|+++.+.+.+.+.
T Consensus       192 n~~gv~~P---v~EI~~icr~~~v~v~~DaAQa---vG~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~~~~~~~  263 (428)
T KOG1549|consen  192 NEIGVLQP---VKEIVKICREEGVQVHVDAAQA---VGKIPVDVQELNADFLSISAHKIYGPPG--IGALYVRRKRPRLR  263 (428)
T ss_pred             cCcccccc---HHHHHHHhCcCCcEEEeehhhh---cCCccccHHHcCchheeeecccccCCCc--ceEEEEccCCCccc
Confidence            99999999   9999999999999999999999   3444555555678899999999999887  88888773112211


Q ss_pred             HH--H---HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCc---eEEEee
Q 015768          255 TQ--L---LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGA---IYLWAR  325 (400)
Q Consensus       255 ~~--l---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~---~~~~~~  325 (400)
                      ..  +   ...+.....+.+++.+..+-.+.+.......-....+.+....+...+.. ++.....++...   ..+.+.
T Consensus       264 ~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~  343 (428)
T KOG1549|consen  264 VEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLS  343 (428)
T ss_pred             ccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceeee
Confidence            00  0   01111223344555555555554431111222222233344444444332 333222222111   122233


Q ss_pred             CCCCCCCHHHHHHHHH---HhcCeEEeC------------CC-ccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          326 LPEKHLDDFEVVRWLA---HRHGVVVIP------------GG-ACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       326 ~~~~~~~~~~~~~~l~---~~~gi~v~~------------g~-~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++.  .++..+...+-   -.-|.....            |. .+....++||+++. ++++|++.+++.+++.+..+.+
T Consensus       344 ~~~--~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~  421 (428)
T KOG1549|consen  344 FPY--VEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE  421 (428)
T ss_pred             ccc--ccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence            330  01111111110   011111110            00 11135789999999 9999999999999999987765


Q ss_pred             c
Q 015768          389 D  389 (400)
Q Consensus       389 ~  389 (400)
                      -
T Consensus       422 ~  422 (428)
T KOG1549|consen  422 M  422 (428)
T ss_pred             c
Confidence            3

>PLN02509 cystathionine beta-lyase

Probab=99.93  E-value=3.1e-23  Score=196.29  Aligned_cols=292  Identities=20%  Similarity=0.171  Sum_probs=198.7

Q ss_pred             CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEE
Q 015768           62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTH  137 (400)
Q Consensus        62 ~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~  137 (400)
                      ..|+.. +. ..++++++++++..+  .++.++++++++++..++ .+.++||+|+++.+.|.++.    ..+...|+++
T Consensus       125 ~~Y~r~-gn-pt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v  199 (464)
T PLN02509        125 YDYTRS-GN-PTRDALESLLAKLDK--ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVV  199 (464)
T ss_pred             CccCCC-CC-HHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEE
Confidence            346433 44 468888888888776  456777788888986655 57899999999999998876    3345679988


Q ss_pred             EEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc
Q 015768          138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC  217 (400)
Q Consensus       138 ~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~  217 (400)
                      +.+ +.      .|++++++.+.+++  |+|++++|+||+|.+.+   +++|.++|++||+++|+|++++......    
T Consensus       200 ~~v-d~------~d~e~l~~ai~~~T--klV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~~~----  263 (464)
T PLN02509        200 KRV-NT------TNLDEVAAAIGPQT--KLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVLSR----  263 (464)
T ss_pred             EEe-CC------CCHHHHHHhCCcCC--eEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccccCC----
Confidence            877 43      26889999998766  99999999999999877   9999999999999999999987544321    


Q ss_pred             ccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768          218 CVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  296 (400)
Q Consensus       218 ~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  296 (400)
                      ....+.++++.|++|+++.+| .-.|+++.++  +.+.+++...+.......++...+.+...|+.    +..++++..+
T Consensus       264 pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~--~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~t----L~~R~~r~~~  337 (464)
T PLN02509        264 PLELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT----MALRIEKQQE  337 (464)
T ss_pred             hhhcCCcEEEecCcccccCCCccceeEEEecc--HHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhh----HHHHHHHHHH
Confidence            123456799999999996423 3468887654  55555555444333333466665555555544    6788899999


Q ss_pred             HHHHHHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----
Q 015768          297 NREIIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----  354 (400)
Q Consensus       297 ~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----  354 (400)
                      ++.++.+.|++++.++ +..|.                .|-.+.+.+. ......++++.| +=..+.+.-|...     
T Consensus       338 nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~-~~~~~~~f~~~l-~l~~~a~slG~~~SLi~~  415 (464)
T PLN02509        338 NARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHLVETT-KYFSIAVSFGSVKSLISM  415 (464)
T ss_pred             HHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-CHHHHHHHHHcC-CcceEcccCCCCCceeeC
Confidence            9999999999887642 22221                1334444552 111122333322 1122222223211     


Q ss_pred             -----------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          355 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       355 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                       + .++.||+|++.   |+.+++++.|++|+..
T Consensus       416 p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl---E~~~DLi~Dl~~Al~~  461 (464)
T PLN02509        416 PCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFRT  461 (464)
T ss_pred             CcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHcc
Confidence                             0 13689999997   6777888888888753

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.93  E-value=3e-23  Score=194.64  Aligned_cols=290  Identities=18%  Similarity=0.156  Sum_probs=197.5

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~  143 (400)
                      +....+++.++++.    |.  ...+.+++++.|+..++.+++++||+|+++.++|.+....    +...|+++.++ ..
T Consensus        61 Ptv~~lE~~la~le----g~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~v-d~  133 (432)
T PRK06702         61 PTLAAFEQKLAELE----GG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF-NP  133 (432)
T ss_pred             cHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEE-CC
Confidence            33455556665554    43  4578899999999999999999999999999999877765    67889999888 32


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                           .+|++.+++++++++  |+|++++|+||++.+.+   +.+|.++|++||+++|+|+++....    -..+...+.
T Consensus       134 -----~~d~~~l~~~I~~~T--k~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~pl~~GA  199 (432)
T PRK06702        134 -----NLTADEIVALANDKT--KLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQAFEHGA  199 (432)
T ss_pred             -----CCCHHHHHHhCCcCC--eEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCChhhcCC
Confidence                 358899999999877  99999999999999999   9999999999999999999986211    122345677


Q ss_pred             EEEEeccccccC-----CCccee-----EEEEccCCcHHHHH----------------------HHHHhhccCCcCccHH
Q 015768          224 VVNLFSFSKAYG-----MMGWRV-----GYIAYPSEVEGFAT----------------------QLLKVQDNIPICASII  271 (400)
Q Consensus       224 ~i~~~s~sK~~g-----~~g~~~-----G~i~~~~~~~~~~~----------------------~l~~~~~~~~~~~~~~  271 (400)
                      ++++.|++|.++     ++|.++     +|...++  +++.+                      ............++++
T Consensus       200 DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~  277 (432)
T PRK06702        200 NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKY--PELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPF  277 (432)
T ss_pred             CEEEEccccccCCCcceeceEEEeCCCcccccccc--cccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHH
Confidence            899999999664     334333     3333221  11111                      1111222334578888


Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCH
Q 015768          272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDD  333 (400)
Q Consensus       272 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~  333 (400)
                      ..+.+...|+.    +..++++..+++..+.+.|++++.+. +..|                . .+-.+.+.+.......
T Consensus       278 ~a~l~~rgL~T----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~  353 (432)
T PRK06702        278 NAYISNIGLET----LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAA  353 (432)
T ss_pred             HHHHHHhccCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHH
Confidence            88888888876    57778888899999999999887632 2211                1 2345566665321112


Q ss_pred             HHHHHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          334 FEVVRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .++++.| +=..+.+.-|..-                      + .++.+|||++.   |+.+++++.|.+++..-.+
T Consensus       354 ~~f~~~l-~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl---Ed~eDLi~Dl~~Al~~~~~  427 (432)
T PRK06702        354 KEFIANV-KLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI---EDVSDIIADLEAALVGGKQ  427 (432)
T ss_pred             HHHHHhC-ccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhcCcc
Confidence            2333322 1112222222110                      0 13589999997   6777888999998876433

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.93  E-value=3.2e-23  Score=195.89  Aligned_cols=288  Identities=22%  Similarity=0.208  Sum_probs=192.8

Q ss_pred             CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCC
Q 015768           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCS  144 (400)
Q Consensus        69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~  144 (400)
                      ....+++.++++.    |  .+..++++++++|+..++.++.++||+|+++.+.|.+....+..    .|+++.++ +. 
T Consensus        59 t~~~Le~~lA~l~----g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~-d~-  130 (425)
T PRK06084         59 TNDVLEQRVAALE----G--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFA-AH-  130 (425)
T ss_pred             hHHHHHHHHHHHh----C--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEE-CC-
Confidence            3445555555554    5  34567888899999999999999999999999999876655543    46676666 42 


Q ss_pred             CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV  224 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  224 (400)
                           .|++.+++.+++++  ++|++++|+||+|.+++   +++|.++|+++|+++|+|++++.....    .....+.+
T Consensus       131 -----~d~e~le~ai~~~t--klV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~----~p~~~gaD  196 (425)
T PRK06084        131 -----DDIAALEALIDERT--KAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC----RPFEHGAD  196 (425)
T ss_pred             -----CCHHHHHHHhccCC--cEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----ChhhcCCC
Confidence                 27899999998765  99999999999999999   899999999999999999999854322    12234677


Q ss_pred             EEEeccccccCCCcceeEEEEccC-Cc--HHHHHH-----------------------------HHHhhccCCcCccHHH
Q 015768          225 VNLFSFSKAYGMMGWRVGYIAYPS-EV--EGFATQ-----------------------------LLKVQDNIPICASIIS  272 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~i~~~~-~~--~~~~~~-----------------------------l~~~~~~~~~~~~~~~  272 (400)
                      +++.|++|+++.+|.++|.++..+ ..  .+..+.                             ...........+++..
T Consensus       197 ivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~  276 (425)
T PRK06084        197 IVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFN  276 (425)
T ss_pred             EEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHH
Confidence            999999999987777777655532 10  111000                             0011222344566666


Q ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHH
Q 015768          273 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDF  334 (400)
Q Consensus       273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~  334 (400)
                      .+.+...|+.    +..+.++..+++..+.+.|++++.+. +..|                . .+-.+.+.+........
T Consensus       277 a~l~lrgl~t----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~  352 (425)
T PRK06084        277 AFLILQGLET----LALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGA  352 (425)
T ss_pred             HHHHHcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHH
Confidence            6665555554    68888899999999999999887632 2221                1 24455566643211122


Q ss_pred             HHHHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++..| +=..+.+.-|...                      + .++.+|||++.   ||.+++++.|.+||...
T Consensus       353 ~f~~~l-~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl---Ed~~dLi~dl~~Al~~~  423 (425)
T PRK06084        353 RFIDAL-KLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI---EHIDDIIADLAQALDAS  423 (425)
T ss_pred             HHHHhC-CcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence            333333 1122222222211                      0 13689999997   67778888898888754

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=2.4e-22  Score=182.40  Aligned_cols=314  Identities=18%  Similarity=0.168  Sum_probs=226.1

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~  123 (400)
                      ..+.++++.+.+.+++...   ..-..++++++++|+    |  ....+.++++|.|+..++++| .+|||.|+++..+|
T Consensus        14 ~~~e~~~v~~vl~sg~i~~---G~~v~~FE~~~ae~~----G--~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tf   84 (374)
T COG0399          14 GEEELAAVQEVLKSGWLTG---GPFVRRFEQAFAEYL----G--VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTF   84 (374)
T ss_pred             chHHHHHHHHHHHcCCeec---ChHHHHHHHHHHHHh----C--CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCch
Confidence            4677888999998775443   445788999999988    4  567899999999999999977 49999999999999


Q ss_pred             cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      ......+...|++++++ ++|++.+++|++.+++.|++++  |+|+.+   +-.|...+   +++|.++|++||+++|+|
T Consensus        85 vATan~i~~~Ga~PVFv-Did~~T~nid~~~ie~aIt~~t--KAIipV---hl~G~~~d---m~~i~~la~~~~l~vIED  155 (374)
T COG0399          85 VATANAVLLVGAKPVFV-DIDPDTLNIDPDLIEAAITPRT--KAIIPV---HLAGQPCD---MDAIMALAKRHGLPVIED  155 (374)
T ss_pred             HHHHHHHHHcCCeEEEE-ecCCcccCCCHHHHHHHcccCC--eEEEEe---hhccCCCC---HHHHHHHHHHcCCeEEEE
Confidence            99999999999999999 9999999999999999999886  999954   56788888   899999999999999999


Q ss_pred             ccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----------------CCcC
Q 015768          204 NTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----------------IPIC  267 (400)
Q Consensus       204 ~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~----------------~~~~  267 (400)
                      .+++.++.-..+.....++..++.+-..|.++ .| ..|.++++|  +++.++++.++..                .++.
T Consensus       156 aAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~it-tg-EGGav~tnd--~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~r  231 (374)
T COG0399         156 AAQAHGATYKGKKVGSFGDIGAFSFHATKNLT-TG-EGGAVVTND--EELAEKARSLRNHGLSRDAVFKYLHEELGYNYR  231 (374)
T ss_pred             cchhccCeecCcccccccceEEEEecCCCCcc-cc-CceEEEeCC--HHHHHHHHHHHHhCcCCCccccceeeecccccC
Confidence            99997664333333333443333333488886 44 679999888  8898888765532                1223


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCC---c-eEEEeeCCCCCCCHHHHHHHHHH
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEG---A-IYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~---~-~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      ++.+........|+.    ++++.++-+++.+.+.+.|++++.+.... +.+   . .+..+.++....+.+.+...| +
T Consensus       232 m~~iqAAigl~QL~~----l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L-~  306 (374)
T COG0399         232 LTEIQAAIGLAQLER----LDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESL-K  306 (374)
T ss_pred             HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHH-H
Confidence            444444444444543    56666666777788888888776422221 111   1 223345554334567777766 5


Q ss_pred             hcCeE----EeCCCcc--------C-----------CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          343 RHGVV----VIPGGAC--------G-----------CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       343 ~~gi~----v~~g~~~--------~-----------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      +.||.    ..|-...        .           ....+++-+.- ++++++++.++.|++++.+
T Consensus       307 ~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~  373 (374)
T COG0399         307 EAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS  373 (374)
T ss_pred             hCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence            77544    4442111        0           12467776555 8999999999999988754

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.93  E-value=8e-23  Score=194.27  Aligned_cols=348  Identities=12%  Similarity=0.098  Sum_probs=222.8

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--C-CcEEE-eCChH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--K-SSVMV-TAGAN   99 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~-~~i~~-~~g~t   99 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+.... . ......+.+.++++.+.+....+  . +.++| +++|+
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs  113 (425)
T PRK09264         36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGIT-H-GLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGT  113 (425)
T ss_pred             CCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccc-c-ccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHH
Confidence            5678899998875  3444 7899999999988752111 1 11112345556666666543111  1 25666 48999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C-------c-----EEEEeccCCCC--CCCCCHHHHHHhhccC
Q 015768          100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G-------V-----THILVGPCSSK--TLHPDADWLEKTLETK  162 (400)
Q Consensus       100 ~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g-------~-----~~~~~~~~~~~--~~~~~~e~l~~~l~~~  162 (400)
                      +|++.+++...  ....+|+....+|++........ |       .     .++.+ |.+..  .-.-+++.+++.+...
T Consensus       114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~  192 (425)
T PRK09264        114 NAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRM-PYDGYFGGDVDTLAYLEKLLEDS  192 (425)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEe-CCCCccccchhHHHHHHHHHHhc
Confidence            99999999875  22368999999998876432211 1       0     22333 32210  0002677888888521


Q ss_pred             ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccC
Q 015768          163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYG  235 (400)
Q Consensus       163 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g  235 (400)
                          ..+.+|+++..+...|. +++.+++++|.++|++||+++|+||++.++...|......  .-..+  +.+++|.+|
T Consensus       193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD--i~t~~K~l~  270 (425)
T PRK09264        193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD--IVTLSKSIS  270 (425)
T ss_pred             cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC--EEEeccccC
Confidence                23578888766777786 5789999999999999999999999998765433221111  11222  346789998


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCC
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEG  311 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~  311 (400)
                      ..|+++|+++.+   +++ ..+.......+++.++++..++.+.++...+ -.+..++++++.+++++.|++    .+..
T Consensus       271 ~~G~pigav~~~---~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~-~~~l~~~~~~~g~~l~~~l~~l~~~~~~~  345 (425)
T PRK09264        271 GYGLPMALVLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS-DDAFEKEVKAKGELVRERLEEIAAKYPGL  345 (425)
T ss_pred             CCccceEEEEEc---hhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            449999999998   454 3333333455777888888777677732110 124455566666666665554    3321


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .......+.++++.++... ....+...+. ++||.+.+...+  ...||++++. ++++++++++++|.++++++.+
T Consensus       346 ~~~vrg~Gl~~~i~l~~~~-~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~  419 (425)
T PRK09264        346 GAEVRGRGMMQGIDFGDGE-LAGKIAAEAF-ENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA  419 (425)
T ss_pred             eecceecccEEEEEecChH-HHHHHHHHHH-HCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            1111223778888886421 2456666665 789999875422  4789999775 7999999999999999988754

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.93  E-value=3.8e-23  Score=196.68  Aligned_cols=342  Identities=16%  Similarity=0.117  Sum_probs=218.6

Q ss_pred             hcCCCeEEcCCCCC--CC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVV--YW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~--~~-~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+..  .+ ..+|.+++++.+.+.+.. ..+...    .....+++++.+... ..+.+++++++++|++
T Consensus        47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~-~~~~~~----~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e  120 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL-SFGAPT----ELEVELAELVIELVP-SIEMVRMVNSGTEATM  120 (426)
T ss_pred             CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC-cCCCCC----HHHHHHHHHHHHhCC-CCCEEEEecCHHHHHH
Confidence            56789999998863  33 378999999999998742 223233    333455555554432 2578999999999999


Q ss_pred             HHHHHhcC--CCCEEEEeCCCccchhHHHHhc-CcEEEEe----cc-----CCCCCC---CCCHHHHHHhhcc-CCCCeE
Q 015768          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMT-GVTHILV----GP-----CSSKTL---HPDADWLEKTLET-KPTPKL  167 (400)
Q Consensus       104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~~~----~~-----~~~~~~---~~~~e~l~~~l~~-~~~~~~  167 (400)
                      .+++....  .+++|+...++|++....+... |......    .+     ..+...   ..|++.+++.+.. ...+++
T Consensus       121 ~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aa  200 (426)
T PRK00062        121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAA  200 (426)
T ss_pred             HHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEE
Confidence            99998653  3578999999999976433221 1100000    00     000000   1278889888853 223577


Q ss_pred             EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEc
Q 015768          168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       168 v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      |+++.....+|.+.+ .+++++|.++|++||+++|+||+|.++..+. .......+...-+.+++|.++ .|+++|+++.
T Consensus       201 iivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~~~~~~~~~~pDi~~~gK~l~-~G~p~ga~~~  278 (426)
T PRK00062        201 VIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-GGAQGYYGVTPDLTTLGKIIG-GGLPVGAFGG  278 (426)
T ss_pred             EEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-ccHHHHhCCCcchHhhhhHhh-CCCcceeeeE
Confidence            777755566888765 8899999999999999999999998774332 111111111112468899998 8899999988


Q ss_pred             cCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceE
Q 015768          247 PSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY  321 (400)
Q Consensus       247 ~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  321 (400)
                      +   +++++.+..   .....+++.+++.+.++.+.|+...  +...+..+.....++.|.+.+++++.+....+. |.+
T Consensus       279 ~---~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~-G~~  354 (426)
T PRK00062        279 R---REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRV-GSM  354 (426)
T ss_pred             H---HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEe-cce
Confidence            8   788887752   2233467789999999888887522  233333333333444444444445543223344 444


Q ss_pred             EEeeCCCC-C--------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          322 LWARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       322 ~~~~~~~~-~--------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +-+.+... .        .+   ...+...++ ++||.+.+..    .+.+++++. ++++++++++++|.+++.++
T Consensus       355 ~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~ei~~~~~~l~~~l~~~  425 (426)
T PRK00062        355 FGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ----FEAGFVSAA-HTDEDIEKTLEAARKAFAAL  425 (426)
T ss_pred             EEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC----cCceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence            43333211 0        01   245676665 7899998743    345677765 59999999999999999764

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.93  E-value=3.7e-23  Score=195.98  Aligned_cols=214  Identities=21%  Similarity=0.246  Sum_probs=154.7

Q ss_pred             CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCC
Q 015768           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCS  144 (400)
Q Consensus        69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~  144 (400)
                      ...++++.++++.    |.  +..++++++++|+..++.+++++||+|+++.+.|.+...    .++..|++++.+ +.+
T Consensus        58 ~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-~~~  130 (418)
T TIGR01326        58 TTDVLEQRIAALE----GG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV-DPD  130 (418)
T ss_pred             hHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEE-CCC
Confidence            3455555555554    63  568899999999999999999999999999999976543    456789999888 532


Q ss_pred             CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV  224 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  224 (400)
                            |++.+++.+++++  ++|++++|+||+|.+.|   +++|.++|+++|+++|+|++|+.....    .....+.+
T Consensus       131 ------d~~~l~~~l~~~t--~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~----~~l~~g~D  195 (418)
T TIGR01326       131 ------DPEEFEKAIDENT--KAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC----RPIDHGAD  195 (418)
T ss_pred             ------CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC----CchhcCCe
Confidence                  7899999998765  99999999999999999   889999999999999999999743221    12234678


Q ss_pred             EEEeccccccCCCcceeEEEEccCCcHHHH--------------------------------HHHHHhhccCCcCccHHH
Q 015768          225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFA--------------------------------TQLLKVQDNIPICASIIS  272 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~--------------------------------~~l~~~~~~~~~~~~~~~  272 (400)
                      +++.|++|++|.+|.|+|+++.+..  .+.                                +.............++..
T Consensus       196 ivv~S~sK~l~g~G~~lGg~v~~~~--~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~  273 (418)
T TIGR01326       196 IVVHSATKYIGGHGTAIGGVIVDGG--KFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFN  273 (418)
T ss_pred             EEEECccccccCCccceEEEEEecc--cccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHH
Confidence            9999999999988999999887531  110                                000011111233344444


Q ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768          273 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      .+.+...++.    +..+.++..++...+.+.|.+++.
T Consensus       274 a~~~~~~l~t----l~~R~~~~~~~a~~la~~L~~~~~  307 (418)
T TIGR01326       274 AFLLLQGLET----LSLRMERHVENALKVAEFLEAHPK  307 (418)
T ss_pred             HHHHHCCccc----HHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4443333332    455666777788888888887765

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.93  E-value=2.4e-22  Score=182.10  Aligned_cols=341  Identities=18%  Similarity=0.150  Sum_probs=227.2

Q ss_pred             hcCCCeEEcCCCCCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      -+|+.||||..++-+  ++ .+|.|.+++.+.+.++  ..|+.+   .+++-.+|+.+.++.. ..+.+-|++++|+|..
T Consensus        50 vDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G--~~fg~P---te~Ei~~Aell~~~~p-~~e~vrfvnSGTEAtm  123 (432)
T COG0001          50 VDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG--LSFGAP---TELEVELAELLIERVP-SIEKVRFVNSGTEATM  123 (432)
T ss_pred             CCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhc--CCCCCC---CHHHHHHHHHHHHhcC-cccEEEEecchhHHHH
Confidence            457889999998844  33 7899999999999985  345543   2344455565555443 2489999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCcEEEEec-------cCCCC------CCCCCHHHHHHhhccC-CCCe
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVG-------PCSSK------TLHPDADWLEKTLETK-PTPK  166 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~-------~~~~~------~~~~~~e~l~~~l~~~-~~~~  166 (400)
                      .+++..+  ...|+|+.++.||+++.+.+. ..|.......       |.+..      .++ |++.++++++.. ..+.
T Consensus       124 sAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-D~~al~~~~~~~g~~IA  202 (432)
T COG0001         124 SAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-DLEALEEAFEEYGDDIA  202 (432)
T ss_pred             HHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-CHHHHHHHHHHcCCcEE
Confidence            9999875  345899999999999886553 3331111000       10000      122 899999999854 4478


Q ss_pred             EEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CC-CccccCCCcEEEEeccccccCCCcceeE
Q 015768          167 LVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GR-KHCCVEGDHVVNLFSFSKAYGMMGWRVG  242 (400)
Q Consensus       167 ~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G  242 (400)
                      +|+++......|. ...+++++.|.++|++||+++|.||+...|...  |. ......+|    +.++.|.+| +|+++|
T Consensus       203 aVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD----lttlGKiIG-GGlP~g  277 (432)
T COG0001         203 AVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD----LTTLGKIIG-GGLPIG  277 (432)
T ss_pred             EEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc----hhhhhhhhc-CCccee
Confidence            8888854333455 566778999999999999999999999877653  21 12222233    667899998 999999


Q ss_pred             EEEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768          243 YIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPE---WVTERVKDLVRNREIIREALSPLGEGAVKGG  316 (400)
Q Consensus       243 ~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  316 (400)
                      .+.++   .++++.+...   ....+++.|+++..|..+.|+...+   ..+++.+.-.++++.+.+.+++.+.......
T Consensus       278 a~gGr---~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~  354 (432)
T COG0001         278 AFGGR---AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNR  354 (432)
T ss_pred             eeccH---HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Confidence            99999   7888876543   3456788899999999998885221   2333333334444444444445554222223


Q ss_pred             CCceEEEeeCCCCCC--------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          317 EGAIYLWARLPEKHL--------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       317 ~~~~~~~~~~~~~~~--------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+++|.+.-.+....        +   ..++++.++ ++||++.|+.+    ...=+|..+ +++++++.++++.++++.
T Consensus       355 ~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~----ea~flS~ah-te~di~~~~~a~~~~~~~  428 (432)
T COG0001         355 VGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQF----EAGFLSTAH-TEEDIDRTLEAADEAFKE  428 (432)
T ss_pred             ecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccc----cceeeeccc-CHHHHHHHHHHHHHHHHH
Confidence            334444333221111        1   234566666 89999998641    234556664 999999999999999988


Q ss_pred             Hhc
Q 015768          386 LVK  388 (400)
Q Consensus       386 ~~~  388 (400)
                      +.+
T Consensus       429 ~~~  431 (432)
T COG0001         429 LAG  431 (432)
T ss_pred             hhc
Confidence            754

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.93  E-value=8.6e-23  Score=188.59  Aligned_cols=346  Identities=15%  Similarity=0.149  Sum_probs=236.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||.++.  ...+ .+|.|++++.+.+..-....+..  ...+...++++.|.+.... ..+.+++++++++|+
T Consensus        53 vdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~--~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~  130 (447)
T COG0160          53 VDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRD--LYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAV  130 (447)
T ss_pred             CCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCc--ccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHH
Confidence            5678999998854  4443 89999999999887633122211  1224455666666655433 357799999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhH-HHHhcC-------------cEEEEeccCCC--CC-C--------CCCHHHH
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYM-SFQMTG-------------VTHILVGPCSS--KT-L--------HPDADWL  155 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~-~~~~~g-------------~~~~~~~~~~~--~~-~--------~~~~e~l  155 (400)
                      +.+++...  .....|+.+..+|++-.. .+...|             ..+..+ |.+.  .+ +        ....+.+
T Consensus       131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~-Pyp~~yr~p~~~~~~~~~~~~~~~~  209 (447)
T COG0160         131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHV-PYPNPYRCPFGIGGEECGDDALEYI  209 (447)
T ss_pred             HHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEe-cCCccccCcccCchhhhhHHHHHHH
Confidence            99999874  344789999999877543 222211             123334 3321  11 1        1134556


Q ss_pred             HHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768          156 EKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF  230 (400)
Q Consensus       156 ~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~  230 (400)
                      +..+.    ....+.+++++..+...|. +.|.++++++.++|++||+++|+||++.++...|.-+.....+....+-++
T Consensus       210 e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~  289 (447)
T COG0160         210 ERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL  289 (447)
T ss_pred             HHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEe
Confidence            66443    2223688888888888887 578889999999999999999999999998887743333333333334477


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC--
Q 015768          231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL--  308 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  308 (400)
                      +|.+| .|+++|.++.+   +++.+ ........++..|+++..++.+.|+..++  +...++..+..+++++.|.++  
T Consensus       290 aK~ig-~G~Pl~avv~r---~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~--e~L~~~a~~~G~~l~~~L~~l~~  362 (447)
T COG0160         290 AKSLG-GGLPLSAVVGR---AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEE--ENLLERAAELGEYLRDRLEELQE  362 (447)
T ss_pred             ccccc-CCCceeEEecc---HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHh
Confidence            89998 69999999999   78877 54555566799999999999999984222  255666666677777766653  


Q ss_pred             --CCCcccCCCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHH
Q 015768          309 --GEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADR  378 (400)
Q Consensus       309 --~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~  378 (400)
                        +.+--++.. |.++-+.+....       ...+++..++. ++|+.+..+..  ..+.+||.+.. .++++++.++++
T Consensus       363 ~~~~IgdVRG~-Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~G~--~~nviRi~PPL~is~e~~d~~l~i  438 (447)
T COG0160         363 KHPLIGDVRGL-GLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTCGP--HGNVLRILPPLTISDEELDEGLDI  438 (447)
T ss_pred             hcCceeccccc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcCCEEeccCC--CCcEEEEeCCcccCHHHHHHHHHH
Confidence              332233333 566666654221       12345666665 89998876442  36899999887 899999999999


Q ss_pred             HHHHHHHH
Q 015768          379 LRRGLEEL  386 (400)
Q Consensus       379 l~~~l~~~  386 (400)
                      |.+++.+.
T Consensus       439 l~~al~~~  446 (447)
T COG0160         439 LEEALKEA  446 (447)
T ss_pred             HHHHHHhh
Confidence            99999864

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.93  E-value=5.2e-23  Score=192.18  Aligned_cols=213  Identities=22%  Similarity=0.229  Sum_probs=156.9

Q ss_pred             HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCC
Q 015768           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTL  148 (400)
Q Consensus        73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~  148 (400)
                      ..+.+++.+++..|.+  ..+++++++.++..++ .++++||+|+++.|.|.+...    .++..|++++.+ +.     
T Consensus        51 ~~~~Le~~lA~l~g~~--~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~-----  121 (377)
T PRK07671         51 TRAALEELIAVLEGGH--AGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV-DT-----  121 (377)
T ss_pred             HHHHHHHHHHHHhCCC--ceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE-CC-----
Confidence            3444444444444653  3455666778887765 577899999999999986554    345579998888 53     


Q ss_pred             CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                       .|++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++++|++|.......    ....+.++++.
T Consensus       122 -~d~~~l~~ai~~~t--klV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~----p~~~g~Divv~  191 (377)
T PRK07671        122 -SNLEEVEEAIRPNT--KAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQS----PISLGADIVLH  191 (377)
T ss_pred             -CCHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCC----hhhhCCeEEEe
Confidence             27889999998766  99999999999999998   8889999999999999999997543321    12345679999


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      |++|++|.++ .-.|+++.++  +++.+++...+.......++...+.+...++    .+..+++++.++...+.+.|++
T Consensus       192 S~sK~l~G~~~~~~G~~v~~~--~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~----tl~~R~~~~~~na~~la~~L~~  265 (377)
T PRK07671        192 SATKYLGGHSDVVAGLVVVNS--PELAEDLHFVQNSTGGILGPQDSWLLLRGLK----TLGIRMEEHETNSRAIAEFLNN  265 (377)
T ss_pred             cCcccccCCccceeEEEEeCc--HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC----hHHHHHHHHHHHHHHHHHHHHc
Confidence            9999997332 4567777664  6788888877665455556655555444443    3667888889999999999998


Q ss_pred             CCC
Q 015768          308 LGE  310 (400)
Q Consensus       308 ~~~  310 (400)
                      .+.
T Consensus       266 ~~~  268 (377)
T PRK07671        266 HPA  268 (377)
T ss_pred             CCC
Confidence            765

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=1.8e-22  Score=187.16  Aligned_cols=290  Identities=15%  Similarity=0.086  Sum_probs=207.3

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  142 (400)
                      .......++.+++.++++.|  .+..+++++|+.|++.++.++.++||+|+++...|.+....+    +..|+++.++ +
T Consensus        57 sR~~nPt~~~le~~la~LEg--~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v-d  133 (395)
T PRK08114         57 GRRGTLTHFSLQEAMCELEG--GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWF-D  133 (395)
T ss_pred             cCCCChhHHHHHHHHHHHhC--CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE-C
Confidence            33344556666666666655  467888899999999999999999999999999998877554    6689999888 4


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCccccC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVE  220 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~  220 (400)
                      .      .|.+.+++.+++++  |+|++++|+||+|.+.|   +++|+++|+++  |+++++|++++....    .....
T Consensus       134 ~------~d~~~l~~~l~~~T--rlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~----~~pl~  198 (395)
T PRK08114        134 P------LIGADIAKLIQPNT--KVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL----FKALD  198 (395)
T ss_pred             C------CCHHHHHHhcCCCc--eEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc----cCHHH
Confidence            2      26788999998776  99999999999999999   99999999998  499999999984322    33445


Q ss_pred             CCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          221 GDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       221 ~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      .+.++++.|.+|+++.++ ..+|.++.+   ++..+.+...........++...+.+...|+.    +.-+++++.+++.
T Consensus       199 ~GaDivv~S~tKyl~Ghsdv~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~~na~  271 (395)
T PRK08114        199 FGIDISIQAGTKYLVGHSDAMIGTAVAN---ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT----LGVRLRQHEESSL  271 (395)
T ss_pred             cCCcEEEEcCcccccCCCcceeEEEEcC---HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHH
Confidence            678899999999996443 677877766   56666666555444556677777766666665    6788899999999


Q ss_pred             HHHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCccC----
Q 015768          300 IIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGACG----  355 (400)
Q Consensus       300 ~l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~~----  355 (400)
                      .+.+.|++++.+. +..|                ..+-.+.+.+.... +.++ +..+++.-.+   .+.-|..-.    
T Consensus       272 ~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~-~~~~-~~~f~~~l~l~~~a~SlGg~~SLi~~  349 (395)
T PRK08114        272 KVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKL-TDEQ-LANYLDNFSLFSMAYSWGGFESLILA  349 (395)
T ss_pred             HHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcc-cHHH-HHHHHHhCCcceeecccCCccceecc
Confidence            9999999887632 2222                12445566665310 1222 2223222222   222221110    


Q ss_pred             -----------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 -----------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 -----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                       .++.+|+|++.   |+.+++++.|.+|+..+
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~liRlSvGl---Ed~~DLi~Dl~~Al~~~  394 (395)
T PRK08114        350 NQPEEIAAIRPAGEVDFTGTLIRLHIGL---EDVDDLIADLAAGFARI  394 (395)
T ss_pred             CCchhhhccCChhHhcCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                             12679999997   67778888888888753

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.92  E-value=2.4e-22  Score=189.21  Aligned_cols=331  Identities=16%  Similarity=0.080  Sum_probs=233.8

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-C-CcEEE--eCChHHHHHHHHHHhcC-------
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K-SSVMV--TAGANQAFVNIVLTLCD-------  111 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~-~~i~~--~~g~t~a~~~~~~~l~~-------  111 (400)
                      ++.|++.+.+.+.+.++...+. ......++.+.+.+++++.+|.+ + +++.+  |+|+|+|++.++.+...       
T Consensus        52 ~~~p~~~~~~~~~l~~~~~np~-s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~  130 (431)
T TIGR01788        52 WMEPEARKLMDETINKNMIDKD-EYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME  130 (431)
T ss_pred             CCCHHHHHHHHHHHhcCCCCcc-cCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence            4567888988888865433322 23334589999999999999987 4 45655  79999999998876531       


Q ss_pred             -CC-----CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          112 -AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       112 -~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                       .|     .+|+++.-.|+++..+++..|+++..+ |.+++++.+|+++|++.+.+++  .+|+++..+|.+|.+.|   
T Consensus       131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i-~~d~~~~~vd~~~L~~~i~~~t--~lV~~t~g~t~tG~idp---  204 (431)
T TIGR01788       131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREV-PMDPGRYVIDPEQVVEAVDENT--IGVVCILGTTYTGEYED---  204 (431)
T ss_pred             hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEE-ecCCCceeeCHHHHHHHHhhCC--eEEEEEeCCCCCcccCC---
Confidence             11     379999999999999999999999999 8887656789999999998776  88999999999999999   


Q ss_pred             HHHHHHHHHHc------CCEEEEcccccccc----cCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHH-HH
Q 015768          186 LKRISDLCKAA------GSWLVVDNTYEYFM----YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG-FA  254 (400)
Q Consensus       186 l~~i~~l~~~~------~~~li~D~a~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~-~~  254 (400)
                      +++|+++|+++      |+++++|.+|+.+.    .+..+........+.+..|.||++. .+..+|.++.++  ++ +.
T Consensus       205 i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~-~P~g~G~l~~r~--~~~l~  281 (431)
T TIGR01788       205 VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGL-VYPGVGWVIWRD--EEALP  281 (431)
T ss_pred             HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccC-CCCCcEEEEEeC--hHHcc
Confidence            89999999999      99999999999654    2222222223456678889999872 345578888775  22 22


Q ss_pred             HHHHH---hhcc----CCcCccH-----HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCceE
Q 015768          255 TQLLK---VQDN----IPICASI-----ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIY  321 (400)
Q Consensus       255 ~~l~~---~~~~----~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~  321 (400)
                      ..+..   +...    .+...+.     +..++....  .+.+.+.+..++..++++++.+.|++.+.+++..+ .....
T Consensus       282 ~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~--lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~i  359 (431)
T TIGR01788       282 EELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLR--LGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPL  359 (431)
T ss_pred             hhheecccccCCCCCCcceecCchHHHHHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceE
Confidence            22211   1100    0111111     112222122  24456788889999999999999999987676654 33566


Q ss_pred             EEeeCCCC---CCCHHHHHHHHHHhcCeEEeCCCc---cCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          322 LWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGA---CGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       322 ~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~---~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.+++...   ..+..++.+.|. ++|+.+..-..   ..+...+|+++.. .+.+.+++.++.|++++..+
T Consensus       360 V~Fr~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (431)
T TIGR01788       360 VAFKLKDDADPGYTLYDLSHRLR-ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL  430 (431)
T ss_pred             EEEEeCCCCCCCcCHHHHHHHHH-HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence            66776531   235667888774 78987532221   1233578999764 78899999999999998764

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.92  E-value=2.3e-22  Score=191.60  Aligned_cols=352  Identities=16%  Similarity=0.140  Sum_probs=226.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....  ......+...++++.|.+...-. .+.++|++++++|+
T Consensus        39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~  116 (445)
T PRK08593         39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYT--PAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAN  116 (445)
T ss_pred             CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence            5678899997774  3454 78999999999987643211  11112344556677776554322 25899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCc-------------EEEEeccCCCC-C--C-CCC-------HHHH
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGV-------------THILVGPCSSK-T--L-HPD-------ADWL  155 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~-~--~-~~~-------~e~l  155 (400)
                      +.+++...  ....+|+....+|++...... ..+.             .++.+ |..+. .  + ..+       ++.+
T Consensus       117 e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~  195 (445)
T PRK08593        117 DGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHI-PFPDKYRGMYEEPDANFVEEYLAPL  195 (445)
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccccccCCcHHHHHHHHHHH
Confidence            99998754  123578899999988764332 2221             12223 22111 0  0 001       2344


Q ss_pred             HHhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768          156 EKTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS  231 (400)
Q Consensus       156 ~~~l~~---~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s  231 (400)
                      ++.+..   ...+.+|+++..+...|.+ +|.+++++|.++|++||+++|+||++..+...+........+...-+.+++
T Consensus       196 ~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~g  275 (445)
T PRK08593        196 KEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFG  275 (445)
T ss_pred             HHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeec
Confidence            444431   2336888888777777876 789999999999999999999999998775444321111111111244789


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----  307 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----  307 (400)
                      |.+| .|+++|+++++   +++.+.+.......+++.+++...++.+.|+.-++  .+..++.+++.+++++.|++    
T Consensus       276 K~l~-~G~p~gav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~  349 (445)
T PRK08593        276 KSLA-GGMPMSAIVGR---KEIMESLEAPAHLFTTGANPVSCAAALATIDMIED--ESLLQRSAEKGEYARKRFDQWVSK  349 (445)
T ss_pred             cccc-CCcccEEEEEc---HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            9997 78999999998   78888775444456778899998888888875221  23445555555666665554    


Q ss_pred             CCCCcccCCCCceEEEeeCCCC----CCC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          308 LGEGAVKGGEGAIYLWARLPEK----HLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      ++.+.-+... |.+..+.+...    ..+   ...+...++ ++||++.+.    ..+.+|++++. +|+++++.+++++
T Consensus       350 ~~~v~~vrG~-Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l  423 (445)
T PRK08593        350 YNFVGDVRGY-GLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAV----AGNVLRFQPPLVITYEQLDTALNTI  423 (445)
T ss_pred             CCcEEEEecc-ceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEecc----CCCEEEEECCCccCHHHHHHHHHHH
Confidence            4433233333 44444444211    001   245666665 799999653    24789999887 8999999999999


Q ss_pred             HHHHHHHhccCccc
Q 015768          380 RRGLEELVKDGMVQ  393 (400)
Q Consensus       380 ~~~l~~~~~~~~~~  393 (400)
                      .+++.++.....-+
T Consensus       424 ~~~l~~~~~~~~~~  437 (445)
T PRK08593        424 EQAFTALEAGKLDQ  437 (445)
T ss_pred             HHHHHHHhccccCC
Confidence            99999887655444

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.92  E-value=1.3e-22  Score=189.60  Aligned_cols=279  Identities=18%  Similarity=0.161  Sum_probs=187.2

Q ss_pred             HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCC
Q 015768           74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLH  149 (400)
Q Consensus        74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~  149 (400)
                      .+.+++.+++..|.  +..+++++++.|+..++ .+.+|||+|++++|.|.+...    .++..|+++..+ +.      
T Consensus        52 ~~~Le~~la~l~g~--~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~v-d~------  121 (380)
T PRK06176         52 RFALEELIADLEGG--VKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII-DT------  121 (380)
T ss_pred             HHHHHHHHHHHhCC--CCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEc-CC------
Confidence            44444444444464  33566677788998766 567899999999999976653    446678888877 43      


Q ss_pred             CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768          150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS  229 (400)
Q Consensus       150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s  229 (400)
                      .|++++++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+......    ....+.++++.|
T Consensus       122 ~d~e~l~~ai~~~t--~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~----p~~~gaDivv~S  192 (380)
T PRK06176        122 SDLSQIKKAIKPNT--KALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN----PLLLGADIVVHS  192 (380)
T ss_pred             CCHHHHHHhcCcCc--eEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC----ccccCCCEEEec
Confidence            27889999988765  99999999999999999   8899999999999999999998643322    123466799999


Q ss_pred             cccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768          230 FSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       230 ~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      ++|+++.++ .-.|+++.++  +++.+++...+.......++...+.+...++    -+..+++++.++..++.+.|++.
T Consensus       193 ~tK~l~g~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~----tl~~R~~~~~~~a~~la~~L~~~  266 (380)
T PRK06176        193 GTKYLGGHSDVVAGLVTTNN--EALAQEIAFFQNAIGGVLGPQDSWLLQRGIK----TLGLRMEAHQKNALCVAEFLEKH  266 (380)
T ss_pred             CceeccCCccceeeEEEecH--HHHHHHHHHHHHHhcCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHHHHHHhC
Confidence            999996444 4567787764  6777777766554333345544444443343    25667777778888888888877


Q ss_pred             CCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCcc--------------
Q 015768          309 GEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC--------------  354 (400)
Q Consensus       309 ~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~--------------  354 (400)
                      +.+. +..|                ..+-.+.+.+..    .++ +.++++.-.+   .+.-|...              
T Consensus       267 p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~----~~~-~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~  341 (380)
T PRK06176        267 PKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN----DSE-AVAFVESLKLFILGESLGGVESLVGIPAFMTHACI  341 (380)
T ss_pred             CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC----HHH-HHHHHHcCCcceEccCCCCCCceeeCCcccccccC
Confidence            6531 1111                124455666642    222 2223332232   22222211              


Q ss_pred             --------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          355 --------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       355 --------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                              + .++.+|+|++.   |+.+++++.|++|+++
T Consensus       342 ~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~Al~~  378 (380)
T PRK06176        342 PKEQREAAGIRDGLVRLSVGI---EHEQDLLEDLEQAFAK  378 (380)
T ss_pred             CHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                    0 13589999997   6777888888888864

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.92  E-value=7.8e-22  Score=188.27  Aligned_cols=363  Identities=15%  Similarity=0.091  Sum_probs=236.8

Q ss_pred             hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhh
Q 015768           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      +...+...+.-+.+....+.+.++|-.+++..  ++.+++++...+.+....+      |+...-.+++++...++..+.
T Consensus        15 ~~~~d~~~~~~i~~e~~~q~~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~   92 (475)
T PLN03226         15 LEEVDPEIADIIEKEKRRQWKGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEA   92 (475)
T ss_pred             hhhcCHHHHHHHHHHHHHHHcCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHH
Confidence            44455666667777777778899998887775  4889999988883321222      322233445555444556666


Q ss_pred             cCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEEEeCC---CccchhHHH---HhcCc----EEEEeccCCCCCCCCC
Q 015768           85 NKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVVMFAP---YYFNSYMSF---QMTGV----THILVGPCSSKTLHPD  151 (400)
Q Consensus        85 ~~~~~~~i~~---~~g~t~a~~~~~~~l~~~gd~vlv~~p---~~~~~~~~~---~~~g~----~~~~~~~~~~~~~~~~  151 (400)
                      ++.+...+.+   .++|+.|+..++.++++|||+|+..+.   +|.++....   +..+.    +++.+ .++.++..+|
T Consensus        93 f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y-~~~~~~g~iD  171 (475)
T PLN03226         93 FRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY-RLDESTGLID  171 (475)
T ss_pred             hCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee-eecCCCCCcC
Confidence            7776655544   377889999999999999999998554   333322211   11122    22244 4555566789


Q ss_pred             HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768          152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS  231 (400)
Q Consensus       152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s  231 (400)
                      ++++++++.... +++|++. .++ +|+..|   +.+|.++|+++|+++++|++|..+..+...........+++++|++
T Consensus       172 ~d~Le~~l~~~~-pklIv~~-~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~h  245 (475)
T PLN03226        172 YDKLEKKAMLFR-PKLIIAG-ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTH  245 (475)
T ss_pred             HHHHHHHHhhcC-CeEEEEe-cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCc
Confidence            999999987433 5766553 333 788889   7888999999999999999998766543222122235789999999


Q ss_pred             cccCCCcceeEEEEccCCcH-----------HHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHH
Q 015768          232 KAYGMMGWRVGYIAYPSEVE-----------GFATQLLKVQ-DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNR  298 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~-----------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~  298 (400)
                      |+++  |.+.|++++++...           ++.+.+.... .....+++.....++..+++.-. ..++++.+++.++.
T Consensus       246 K~L~--GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na  323 (475)
T PLN03226        246 KSLR--GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANA  323 (475)
T ss_pred             cccc--CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence            9993  33448888773110           2222222211 11233455555666666666421 23467789999999


Q ss_pred             HHHHHHhccCCCCcccCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEec----c-C
Q 015768          299 EIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFG----G-L  367 (400)
Q Consensus       299 ~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~----~-~  367 (400)
                      ++|++.|++.+. .+..+ .....+++.+.....+..++...| ++.||.+..+..++     .+..+|++..    + +
T Consensus       324 ~~L~~~L~~~G~-~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L-~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~  401 (475)
T PLN03226        324 AALANRLMSKGY-KLVTGGTDNHLVLWDLRPLGLTGSRVEKVL-DLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGL  401 (475)
T ss_pred             HHHHHHHHhCCC-EEEcCCCCCCEEEEEccCCCCCHHHHHHHH-HHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCC
Confidence            999999998765 44432 235667778754444676676655 58999997664222     3567998433    3 6


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 015768          368 VEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++|+++..+.|.+++...
T Consensus       402 ~~~d~~~ia~~i~~~~~~~  420 (475)
T PLN03226        402 VEKDFEKVAEFLHRAVTIA  420 (475)
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            8899999999999999854

>PRK02769 histidine decarboxylase; Provisional

Probab=99.92  E-value=7.2e-22  Score=183.62  Aligned_cols=315  Identities=11%  Similarity=0.051  Sum_probs=220.7

Q ss_pred             HHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEE
Q 015768           46 KMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVM  118 (400)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i--~~~~g~t~a~~~~~~~l~--~~gd~vlv  118 (400)
                      ...++.+.....++...++..   .....++.+++.+++++.+|.+++++  ++|+|+|+++..++.+..  .++++|++
T Consensus        36 ~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~  115 (380)
T PRK02769         36 YSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYY  115 (380)
T ss_pred             HHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEe
Confidence            455666666655432222222   12456788899999999999876654  899999999887776553  56889999


Q ss_pred             eCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      ++-.|+++..+++.+|.+...+ |.+++| .+|+++|++.+++. ..+.+|+++.++|++|.+.|   +++|.++|+++|
T Consensus       116 s~~~H~Sv~ka~~~lg~~~~~V-~~~~~g-~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g  190 (380)
T PRK02769        116 SKDTHYSVSKIARLLRIKSRVI-TSLPNG-EIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIG  190 (380)
T ss_pred             CCCceehHHHHHHHcCCCCcee-ccCCCC-cCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhC
Confidence            9999999999999999888888 777654 68999999999854 22488888899999999999   888899999998


Q ss_pred             ---CEEEEcccccccccCC----CCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-------c
Q 015768          198 ---SWLVVDNTYEYFMYDG----RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-------N  263 (400)
Q Consensus       198 ---~~li~D~a~~~~~~~~----~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~-------~  263 (400)
                         +++++|.+++.+...-    .+.... .+.+.+..|.||+++ .+.++|.++.+   ++..+.+.....       .
T Consensus       191 ~~~~~lHVDaA~gg~~~p~~~~~~~~d~~-~~vDsis~s~HK~~~-~P~g~G~l~~r---~~~~~~~~~~~~yl~~~d~t  265 (380)
T PRK02769        191 IDDYYIHADAALSGMILPFVNNPPPFSFA-DGIDSIAISGHKFIG-SPMPCGIVLAK---KKYVERISVDVDYIGSRDQT  265 (380)
T ss_pred             CCceEEEEEecccceeecccCccccCCcc-CCCCEEEECCcccCC-CCCCcEEEEEe---hhhhhhcccCccccCCCCCC
Confidence               6999999998754321    112222 256788899999986 45668998888   444444421100       1


Q ss_pred             CCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          264 IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      ...+.+.....++-.+|+. +.+.+++..++..++++++.+.|++.+...+..|. .+.+.++.+.     +++    . 
T Consensus       266 ~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~-~~~v~f~~~~-----~~~----~-  334 (380)
T PRK02769        266 ISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPN-SITVVFPCPS-----ERI----W-  334 (380)
T ss_pred             ccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCC-ceEEEEcCCC-----HHH----H-
Confidence            1222333333333333432 34667888899999999999999887664444454 6666666552     122    2 


Q ss_pred             hcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          343 RHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       343 ~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                       +|..+.+-     ++++|+++.. .+.+.+++.++.|.+.+....
T Consensus       335 -~~w~l~~~-----~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~  374 (380)
T PRK02769        335 -KKWHLATS-----GNQAHIITMPHHNKQQIDSLIDELIFDLKNPN  374 (380)
T ss_pred             -hCeeEccc-----CCEEEEEECCCCCHHHHHHHHHHHHHHHhccc
Confidence             45555542     3588998665 788888999988888777543

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.92  E-value=5.7e-22  Score=186.31  Aligned_cols=335  Identities=14%  Similarity=0.104  Sum_probs=224.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.... +  .....+...++++++.+..+  .+.+++++++++|++
T Consensus        33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~-~--~~~~~~~~~~la~~l~~~~~--~~~v~f~~SGseA~e  107 (395)
T PRK03715         33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINP-S--PAFYNEPMAKLAGLLTQHSC--FDKVFFANSGAEANE  107 (395)
T ss_pred             CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccc-c--ccccCHHHHHHHHHHhhccC--CCEEEEeCCcHHHHH
Confidence            4678999998864  4444 5899999999988753211 1  12235667788888875532  478999999999999


Q ss_pred             HHHHHhc------CCC-CEEEEeCCCccchh-HHHHhcCcEE---EEeccCCCCCC----CCCHHHHHHhhccCCCCeEE
Q 015768          104 NIVLTLC------DAG-DSVVMFAPYYFNSY-MSFQMTGVTH---ILVGPCSSKTL----HPDADWLEKTLETKPTPKLV  168 (400)
Q Consensus       104 ~~~~~l~------~~g-d~vlv~~p~~~~~~-~~~~~~g~~~---~~~~~~~~~~~----~~~~e~l~~~l~~~~~~~~v  168 (400)
                      .+++.+.      ++| .+|+..+.+|++.. ..+...|...   ... |..+ ++    ..|++.+++.+.++  .++|
T Consensus       108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~-~~~~-~~~~~~~~d~~~l~~~l~~~--~aav  183 (395)
T PRK03715        108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFA-PQVP-GFPKAELNDIASVEKLITDK--TVAV  183 (395)
T ss_pred             HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCC-CCCC-CceeeCCchHHHHHHHcCCC--ceEE
Confidence            9999885      123 67888888888865 3333333221   111 1111 11    13788999888654  4888


Q ss_pred             EEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768          169 SVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       169 ~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      +++..++..|... +.+++++|.++|++||+++|+||++.++...|........+...-+.+++|.+| .|+++|.++.+
T Consensus       184 i~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg-~G~p~~av~~~  262 (395)
T PRK03715        184 MLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIG-GGVPLAALLAK  262 (395)
T ss_pred             EEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhh-CCcceEEEEEc
Confidence            8887777888764 789999999999999999999999997644443211111111122457789998 67899999888


Q ss_pred             CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceEEE
Q 015768          248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIYLW  323 (400)
Q Consensus       248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~  323 (400)
                         +++.. +.......+++.+++...++.+.|+.-++  ++..++.+++.+++++.|+++    + +...... +.++-
T Consensus       263 ---~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~-Glm~~  334 (395)
T PRK03715        263 ---AEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLA--PGFLEGVRARGEYLKEKLLELSEERG-LEGERGE-GLLRA  334 (395)
T ss_pred             ---ccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcc-eeEEE
Confidence               45532 22222345777888888888888875221  345566667777777766643    3 2223333 66666


Q ss_pred             eeCCCCCCCHHHHHHHHHHhc---CeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          324 ARLPEKHLDDFEVVRWLAHRH---GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~---gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.+...  ....+...+ .+.   ||.+.+.    .++.+||++.. +|+++++.++++|.+++.++
T Consensus       335 i~l~~~--~~~~~~~~~-~~~~~~Gi~~~~~----~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        335 LLLGKD--IGPQIVEKA-RDMQPDGLLLNAP----RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             EEecCc--hHHHHHHHH-HhccCCCEEEeec----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            777532  123444333 345   9998643    24789999888 89999999999999999864

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.92  E-value=4.6e-22  Score=188.13  Aligned_cols=341  Identities=12%  Similarity=0.118  Sum_probs=222.8

Q ss_pred             hcCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+  ...++ .+|+|.+++.+.+.+.....   ..-..+.+..+++.|.+...-..+.++|++++++|++
T Consensus        72 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e  148 (442)
T TIGR03372        72 TQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---QELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVE  148 (442)
T ss_pred             CCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence            346889999887  45554 78999999999987643221   1112345566777776554322367999999999999


Q ss_pred             HHHHHhcC-----CCCEEEEeCCCccchhHHHHhcCcEEEE---eccCCCCC---CCCCHHHHHHhhcc----CCCCeEE
Q 015768          104 NIVLTLCD-----AGDSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLET----KPTPKLV  168 (400)
Q Consensus       104 ~~~~~l~~-----~gd~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~~~e~l~~~l~~----~~~~~~v  168 (400)
                      .+++....     ...+|+....+|++..............   +.|..+.-   -..|.+.+++.++.    ...+.+|
T Consensus       149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAav  228 (442)
T TIGR03372       149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAI  228 (442)
T ss_pred             HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEE
Confidence            99997642     2368999999998876444322111000   00111110   01256777776641    2336778


Q ss_pred             EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEeccccccCCCc-ceeEEE
Q 015768          169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMG-WRVGYI  244 (400)
Q Consensus       169 ~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~g~~g-~~~G~i  244 (400)
                      +++..+...|.. .|+++++++.++|++||+++|+||++.++...|..+.....  ..+++  +++|.+| .| +++|.+
T Consensus       229 IvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv--t~gK~lg-~G~~Pigav  305 (442)
T TIGR03372       229 ILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL--CLAKALG-GGVMPIGAT  305 (442)
T ss_pred             EEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee--eehhhhc-CCcccceEE
Confidence            777667677775 57889999999999999999999999876544432111111  22343  5799997 77 689999


Q ss_pred             EccCCcHHHHHHHH--HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CC-CCcccCCC
Q 015768          245 AYPSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LG-EGAVKGGE  317 (400)
Q Consensus       245 ~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~~~~  317 (400)
                      +.+   +++.+.+.  ......+++.|+++..++.+.|+.-++  ++..++.++..+++++.|++    ++ .+.-+...
T Consensus       306 v~~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~  380 (442)
T TIGR03372       306 IAT---EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK  380 (442)
T ss_pred             Eec---HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence            988   67777663  224456788899999999888875221  22344455555666665554    33 21222333


Q ss_pred             CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                       |.++-+.+.... ....+...++ ++||++.+...  ..+.+||.+.. +|++++++++++|.+++
T Consensus       381 -Gl~~giel~~~~-~~~~i~~~l~-~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~~  442 (442)
T TIGR03372       381 -GLLMAIEFRDNE-IGYAFAKELF-QQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL  442 (442)
T ss_pred             -eEEEEEEeCChH-HHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence             677777775421 2456777776 78999975321  24789999887 89999999999998864

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.92  E-value=8.7e-22  Score=187.58  Aligned_cols=346  Identities=13%  Similarity=0.134  Sum_probs=229.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....   .....+.+..+++.|.+...-..+.++|++++++|++
T Consensus        79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve  155 (459)
T PRK11522         79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---QELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE  155 (459)
T ss_pred             CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHH
Confidence            3477899998874  4454 78999999999988643221   1122445566677776554323468999999999999


Q ss_pred             HHHHHhcC----CC-CEEEEeCCCccchhHHHHh-cCcEEEE--eccCCCCCC---CCCHHHHHHhhcc----CCCCeEE
Q 015768          104 NIVLTLCD----AG-DSVVMFAPYYFNSYMSFQM-TGVTHIL--VGPCSSKTL---HPDADWLEKTLET----KPTPKLV  168 (400)
Q Consensus       104 ~~~~~l~~----~g-d~vlv~~p~~~~~~~~~~~-~g~~~~~--~~~~~~~~~---~~~~e~l~~~l~~----~~~~~~v  168 (400)
                      .+++....    +| ..|+....+|++....... .+-....  +.|..++-.   -.|.+++++.+..    ...+.++
T Consensus       156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAav  235 (459)
T PRK11522        156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAV  235 (459)
T ss_pred             HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEE
Confidence            99997641    23 4789999999997644332 2211000  001111100   1167788887752    2335677


Q ss_pred             EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEeccccccCCCc-ceeEEE
Q 015768          169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMG-WRVGYI  244 (400)
Q Consensus       169 ~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~g~~g-~~~G~i  244 (400)
                      +++..+...|.+ .|.++++++.++|++||+++|+||++.++...|..+.....  ..+++  +++|.+| .| +++|.+
T Consensus       236 IvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv--t~gK~lg-gG~~Pigav  312 (459)
T PRK11522        236 ILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL--CLAKALG-GGVMPIGAT  312 (459)
T ss_pred             EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE--Eechhhh-CCCccceeE
Confidence            777667777875 57889999999999999999999999866443332111111  22333  7799997 67 689999


Q ss_pred             EccCCcHHHHHHHH--HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----C-CCcccCCC
Q 015768          245 AYPSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----G-EGAVKGGE  317 (400)
Q Consensus       245 ~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~~~  317 (400)
                      +.+   +++.+.+.  ......+++.++++..++.+.|+.-++  +...++.+++.++|++.|+++    + .+.-+...
T Consensus       313 ~~~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~  387 (459)
T PRK11522        313 IAT---EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE--QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGK  387 (459)
T ss_pred             EEc---HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEec
Confidence            988   67776653  234456788899999998888885322  235566677777777777654    3 11222233


Q ss_pred             CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       |.++.+.+.... ....+...++ ++||.+.+..  ...+.+|+.++. ++++++++++++|.+++.++.+
T Consensus       388 -Gl~~giel~~~~-~~~~i~~~l~-~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~  454 (459)
T PRK11522        388 -GMLMAIEFVDNE-IGYNFASEMF-RQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV  454 (459)
T ss_pred             -eeEEEEEecCch-HHHHHHHHHH-HCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence             667777775421 2456777665 7899997542  135789999887 8999999999999999987654

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.92  E-value=9.8e-22  Score=167.43  Aligned_cols=322  Identities=15%  Similarity=0.123  Sum_probs=241.3

Q ss_pred             HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccc--h
Q 015768           50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN--S  126 (400)
Q Consensus        50 ~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~--~  126 (400)
                      .++.+++..+ ..+| ..+....+.+.+.+-++..+... +.-+++..+++.+.++++..++.|||+|++..-+-++  +
T Consensus        30 ~~V~~A~~~~-~lgh-~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra  107 (385)
T KOG2862|consen   30 GRVQEAMSRP-SLGH-MSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRA  107 (385)
T ss_pred             HHHHHhhcCC-cccc-CCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHH
Confidence            3444455554 3334 34456677777777777666544 3446666779999999999999999999988777666  4


Q ss_pred             hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccc
Q 015768          127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY  206 (400)
Q Consensus       127 ~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~  206 (400)
                      .+..++.|+++..+ +.+ .|...++|.+++.++.++ ++++++++....||+..+.  +..+.++|++|+.++++|.+.
T Consensus       108 ~D~~~r~ga~V~~v-~~~-~G~~~~le~i~~~lsqh~-p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~lllVD~Va  182 (385)
T KOG2862|consen  108 ADCARRYGAEVDVV-EAD-IGQAVPLEEITEKLSQHK-PKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALLLVDTVA  182 (385)
T ss_pred             HHHHHhhCceeeEE-ecC-cccCccHHHHHHHHHhcC-CceEEEEecCccccccchH--HHHHHHHhhcCCeEEEEechh
Confidence            47889999999988 654 556789999999998765 8999999999999999884  555667899999999999998


Q ss_pred             cccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-----------------------c
Q 015768          207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-----------------------N  263 (400)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~-----------------------~  263 (400)
                      +   .++.++..+.++.++......|++|.| ...+.+..+   +...++++..+.                       .
T Consensus       183 S---lggt~F~mDewgVDvaytgSQKaL~aP-~GLsiisfS---~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~  255 (385)
T KOG2862|consen  183 S---LGGTEFEMDEWGVDVAYTGSQKALGAP-AGLSIISFS---DKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRA  255 (385)
T ss_pred             h---cCCccceehhhcccEEEecchhhcCCC-CCcceeecC---HHHHHHHhhccCCceEEEEeHHhhcchhccCCcccc
Confidence            8   557788888888899888889999843 334557766   455555543221                       1


Q ss_pred             CCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCC-cccCCC--CceEEEeeCCCCCCCHHHHHHH
Q 015768          264 IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEG-AVKGGE--GAIYLWARLPEKHLDDFEVVRW  339 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  339 (400)
                      ..++++.-..+.+.++|.. .++.+++..++++++.+.++..|+++|.- .+..+.  ..-...+.+|... |..+++.+
T Consensus       256 yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gv-Dw~dVv~~  334 (385)
T KOG2862|consen  256 YHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGV-DWKDVVAY  334 (385)
T ss_pred             cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCC-CHHHHHHH
Confidence            2356777777777777774 34668899999999999999999998772 222211  1223446666654 89999999


Q ss_pred             HHHhcCeEEeCCCccCCCCeEEEE-ecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          340 LAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       340 l~~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +..++++.+..|-....+..+||+ +++ -+.+.++..++.|+.++++.
T Consensus       335 ~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~  383 (385)
T KOG2862|consen  335 AMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK  383 (385)
T ss_pred             HHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence            998888888877766678899998 444 67889999999999988763

>PRK07482 hypothetical protein; Provisional

Probab=99.92  E-value=1.3e-21  Score=187.00  Aligned_cols=346  Identities=13%  Similarity=0.035  Sum_probs=224.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSI-SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+... ..+  .....+.+.++++.|.+......+.++|+++|++|+
T Consensus        47 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAv  124 (461)
T PRK07482         47 AQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY--VGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDAN  124 (461)
T ss_pred             CCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc--cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHH
Confidence            5678999998876  3443 689999999999886421 111  111234556677777655432347899999999999


Q ss_pred             HHHHHHhc------C-C-CCEEEEeCCCccchhHHHHh-cC-------c-----EEEEeccCCC--C----CC------C
Q 015768          103 VNIVLTLC------D-A-GDSVVMFAPYYFNSYMSFQM-TG-------V-----THILVGPCSS--K----TL------H  149 (400)
Q Consensus       103 ~~~~~~l~------~-~-gd~vlv~~p~~~~~~~~~~~-~g-------~-----~~~~~~~~~~--~----~~------~  149 (400)
                      +.+++...      . + ..+|+....+|++....... .|       .     .+..+ +.+.  .    +.      .
T Consensus       125 e~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~  203 (461)
T PRK07482        125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHT-EAPHYYRRADAGMSEEQFSA  203 (461)
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEc-CCCccccccccCCCHHHHHH
Confidence            99999874      1 2 36799999999886532211 11       0     11111 1111  0    00      0


Q ss_pred             CCHHHHHHhhc-c-CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcE
Q 015768          150 PDADWLEKTLE-T-KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHV  224 (400)
Q Consensus       150 ~~~e~l~~~l~-~-~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~  224 (400)
                      .+++.+++.+. . ...+.+|+++..+...|.+ ++.+++++|.++|++||+++|.||++.+|...+..+.....  ..|
T Consensus       204 ~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PD  283 (461)
T PRK07482        204 YCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPD  283 (461)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCC
Confidence            03567777774 2 2336888888666666776 67889999999999999999999999988554432221111  223


Q ss_pred             EEEeccccccCCCcc-eeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768          225 VNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  296 (400)
Q Consensus       225 i~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  296 (400)
                      ++  +++|.++ .|. ++|.++.+   +++.+.+..       .....+++.|+++..++.+.|+..++  +...++.++
T Consensus       284 iv--~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~--~~l~~~~~~  355 (461)
T PRK07482        284 LI--TVAKGLT-SAYAPLSGSIVG---EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER--ENLVGNAAE  355 (461)
T ss_pred             EE--EEccccc-cCccccceeeec---HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHH
Confidence            33  4589997 674 89999888   677776652       12456888999999999998875221  223344445


Q ss_pred             HHHHHHHHhc----cCCCCcccCCCCceEEEeeCCCCC-----CC-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEE
Q 015768          297 NREIIREALS----PLGEGAVKGGEGAIYLWARLPEKH-----LD-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRI  362 (400)
Q Consensus       297 ~~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi  362 (400)
                      ..+++.+.|+    +++.+..+... |.++-+.+....     .+     ...+...++ ++||++.++.   ..+.+|+
T Consensus       356 ~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~~---~~~~i~~  430 (461)
T PRK07482        356 VGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL-ERGVIARAMP---HGDILGF  430 (461)
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH-HCCcEEecCC---CCCEEEE
Confidence            5555555544    45543334444 566666653211     01     235666665 7999986532   2478999


Q ss_pred             Eecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          363 SFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       363 ~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .++. +|++|+++++++|.++++++.+
T Consensus       431 ~Ppl~it~~ei~~~~~~l~~~l~~~~~  457 (461)
T PRK07482        431 APPLVLTRAEADEIVAIAKDAVDEVLG  457 (461)
T ss_pred             eCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            8776 8999999999999999988643

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=6.6e-22  Score=187.04  Aligned_cols=290  Identities=20%  Similarity=0.200  Sum_probs=192.6

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~  145 (400)
                      ...+++.++++.    |.+  ..++|+++|+|++.++.++.++||+|+++...|.+....+    +..|++++++ +.+ 
T Consensus        66 ~~~le~~lA~l~----g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~~-  137 (433)
T PRK08134         66 VAVLEERVAALE----GGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFV-KPG-  137 (433)
T ss_pred             HHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEE-CCC-
Confidence            445555555554    643  4788999999999999999999999999999998765544    5589999988 543 


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                           |++.+++.+++++  |+|++++++||+|.+.|   +++|.++|+++|+++|+|+++......    .....+.++
T Consensus       138 -----d~~~l~~~i~~~T--klV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~----~pl~~GaD~  203 (433)
T PRK08134        138 -----DIDGWRAAIRPNT--RLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL----RPFEHGADL  203 (433)
T ss_pred             -----CHHHHHHhcCCCC--eEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----CchhcCCCE
Confidence                 7899999998877  99999999999999999   999999999999999999998744331    123457789


Q ss_pred             EEeccccccCCCcceeEEEEccC-Cc------------------------H-----HHHHHHH-HhhccCCcCccHHHHH
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYPS-EV------------------------E-----GFATQLL-KVQDNIPICASIISQH  274 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~~-~~------------------------~-----~~~~~l~-~~~~~~~~~~~~~~~~  274 (400)
                      ++.|.+|++|.+|-.+|.++... ..                        +     .+..+.. ..........++...+
T Consensus       204 vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~  283 (433)
T PRK08134        204 VYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAW  283 (433)
T ss_pred             EEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence            99999999986665555543321 00                        0     0000000 0111223345555555


Q ss_pred             HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC-----------------CCceEEEeeCCCCCCCHHHH
Q 015768          275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG-----------------EGAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       275 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~  336 (400)
                      .+...|+.    +..+.++..+++..+.+.|++++.+. +..|                 ..+-.+.+.+........++
T Consensus       284 l~~~gL~t----l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f  359 (433)
T PRK08134        284 QLLQGIET----LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKF  359 (433)
T ss_pred             HHhcCCCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHH
Confidence            55545544    67888889999999999999877532 1111                 12345556664311112233


Q ss_pred             HHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          337 VRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      ++.| +=..+.+.-|...                      + .++.+|||++.   |+.+++++.|.+|++...+.
T Consensus       360 ~~~l-~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dli~dl~~Al~~~~~~  431 (433)
T PRK08134        360 IESL-KLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL---EDADDLIDDLKRALKAAEKA  431 (433)
T ss_pred             HHhC-CcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhhhc
Confidence            3322 1111122222211                      0 13579999997   67778899999999876554

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.91  E-value=2.5e-21  Score=171.15  Aligned_cols=362  Identities=19%  Similarity=0.159  Sum_probs=263.5

Q ss_pred             hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhh
Q 015768           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      +...+...+..+.+....+++.|+|-.++|..  ++.|+++....+.+..      -.-|+...-.+.++....++.+++
T Consensus         7 l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L   84 (413)
T COG0112           7 LADYDPEIFEAIQQELERQREHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL   84 (413)
T ss_pred             HHhcCHHHHHHHHHHHHHHhhceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence            33455677788888888888999998887765  5899999988886522      234556667788888888999999


Q ss_pred             cCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH---HhcC--cEEEEeccCCCCCCCCCHHHHHHhh
Q 015768           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTG--VTHILVGPCSSKTLHPDADWLEKTL  159 (400)
Q Consensus        85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~---~~~g--~~~~~~~~~~~~~~~~~~e~l~~~l  159 (400)
                      +|.+.-++.-.+|+ .|+..++.+|.+|||+|+-.+-.+.++...-   ...|  ++.+.+ +++++...+|.|.+++..
T Consensus        85 Fga~~anVQPhSGs-~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y-~vd~et~~IDyD~~~k~a  162 (413)
T COG0112          85 FGAEYANVQPHSGS-QANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSY-GVDPETGLIDYDEVEKLA  162 (413)
T ss_pred             hCCCccccCCCCch-HHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEec-ccccccCccCHHHHHHHH
Confidence            99887777777765 9999999999999999998887776665332   2223  477888 899887789999999988


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  239 (400)
                      .+.+ ||+|+.-...  .-..+|   ++++.++|++.|.++++|.+|..+...+..+...-+-.+++++|.||.+  +|.
T Consensus       163 ~e~k-PK~ii~G~Sa--Y~r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTl--rGP  234 (413)
T COG0112         163 KEVK-PKLIIAGGSA--YSRPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTL--RGP  234 (413)
T ss_pred             HHhC-CCEEEECccc--cccccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCC--CCC
Confidence            8654 7988865332  336678   7888888889999999999997555443333333334789999999998  688


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHH-HHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASII-SQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  317 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  317 (400)
                      |.|.|.+++  +++.+++.+.-.....+.+-. ...+.+.++.+ .+..++++.++..+|++.|.+.|.+.|.-.+.+.+
T Consensus       235 rGG~Il~~~--eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgT  312 (413)
T COG0112         235 RGGIILTND--EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGT  312 (413)
T ss_pred             CceEEEecc--HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCc
Confidence            999999996  689999987554333333322 22222233333 22446899999999999999999998874455555


Q ss_pred             CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC-ccC-----CCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG-ACG-----CRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~-~~~-----~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ....+.+++.....++.+... ++.+.||.+.--. ++.     .+..|||+...     +.++|+++..+.+.+++...
T Consensus       313 dnHl~lVDl~~~~~~Gk~ae~-~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~  391 (413)
T COG0112         313 DNHLVLVDLRSKGLTGKKAEA-ALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL  391 (413)
T ss_pred             cceEEEEEcccCCCCHHHHHH-HHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhcc
Confidence            567777787744446666555 4568999985332 222     25789998553     56788888888888888764


Q ss_pred             h
Q 015768          387 V  387 (400)
Q Consensus       387 ~  387 (400)
                      .
T Consensus       392 ~  392 (413)
T COG0112         392 K  392 (413)
T ss_pred             c
Confidence            3

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.91  E-value=4.3e-22  Score=184.42  Aligned_cols=288  Identities=23%  Similarity=0.208  Sum_probs=200.7

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~  142 (400)
                      ...-....+.+.+.++++.|  .+..+++++|+.|+..++.+++++||+|++....|.+....++    ..|+++.++ +
T Consensus        50 ~R~gnPt~~~le~~la~Le~--g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~-d  126 (386)
T PF01053_consen   50 SRYGNPTVRALEQRLAALEG--GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFV-D  126 (386)
T ss_dssp             TTTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEE-S
T ss_pred             eccccccHHHHHHHHHHhhc--ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEe-C
Confidence            33345666777777777766  3778999999999999999999999999999999988876654    468998887 3


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEcccccccccCCCCccccCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~-~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                      .      -|++++++.+++++  ++|+++.|+||+..+.|   +.+|+++|+++| +++++|++++....    ..+...
T Consensus       127 ~------~d~~~l~~~l~~~t--~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL~~  191 (386)
T PF01053_consen  127 P------TDLEALEAALRPNT--KLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----QNPLEL  191 (386)
T ss_dssp             T------TSHHHHHHHHCTTE--EEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GGGG
T ss_pred             c------hhHHHHHhhccccc--eEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee----eccCcC
Confidence            2      27899999999876  99999999999999999   999999999998 99999999875422    223445


Q ss_pred             CcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +.++++.|++|.++. ...-.|.++.++. +++.++++.........+++...+.+...++.    +.-+++++.+++..
T Consensus       192 GaDivv~S~TKyl~Ghsdv~~G~vv~~~~-~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T----l~~R~~~~~~nA~~  266 (386)
T PF01053_consen  192 GADIVVHSATKYLSGHSDVMGGAVVVNGS-SELYDRLREFRRLLGATLSPFDAWLLLRGLRT----LPLRMERQNENAEA  266 (386)
T ss_dssp             T-SEEEEETTTTTTTSSSE-EEEEEESSH-HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred             CceEEEeeccccccCCcceeeEEEEECch-hhhhhhhcchhhhcCccchHHHHHHHhcCCCc----HHHHHHHHHHHHHH
Confidence            678999999999953 3344677776531 46777777766655667778888877777776    67888999999999


Q ss_pred             HHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc------
Q 015768          301 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC------  354 (400)
Q Consensus       301 l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~------  354 (400)
                      +.+.|++++.+. +..|                ..+-.+.+.+...    .+.+..+.+.-.++   +.-|...      
T Consensus       267 lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~----~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p  342 (386)
T PF01053_consen  267 LAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG----EEAARRFLDALKLFSIAPSLGGVESLISHP  342 (386)
T ss_dssp             HHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH----HHHHHHHHHH-SSSEESSS-SSSS-EEEET
T ss_pred             HHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc----hhhhHhHHhhhhhHhhhhhcCCcccccccc
Confidence            999999987632 3222                1233666777642    22233333333433   1122211      


Q ss_pred             ----------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          355 ----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       355 ----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                                      + .++.+|+|++.   |+.+++++.|++|++
T Consensus       343 ~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~  386 (386)
T PF01053_consen  343 ASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE  386 (386)
T ss_dssp             TCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred             cchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence                            0 13679999997   778888888888875

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.91  E-value=8.3e-22  Score=181.99  Aligned_cols=315  Identities=13%  Similarity=0.102  Sum_probs=222.9

Q ss_pred             CCcHHHHHHHHHhhcC---CCCCCCCCCCCcH---HHHHHHHHHHHhhcCCC-CCcEEEeCC-hHHHHHHHHHHhcCCCC
Q 015768           43 QPPKMAMEKVKELVWD---PSISKYGADEGLP---ELRDALVKKLNQENKLY-KSSVMVTAG-ANQAFVNIVLTLCDAGD  114 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~---~~~~~~a~~l~~~~~~~-~~~i~~~~g-~t~a~~~~~~~l~~~gd  114 (400)
                      ..|.+|++++.+.+.+   ...+.+....-.+   ++.+.+.+.+++.++.+ ..++++++| +|.|++.++..+..+||
T Consensus         2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~   81 (349)
T TIGR01364         2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK   81 (349)
T ss_pred             CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            3578999999999884   2233443333334   67777777788888874 457888866 99999999999999999


Q ss_pred             EEEEeCCCccch--hHHHHhcCcEEEEeccCCC---CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          115 SVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       115 ~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      ++++...+.++.  .+.++..|. +..+ ..++   ++-.++++.++  +++  .+++|.+++..+.||+..+       
T Consensus        82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~-~~~~~~~~~~~~~~~~~~--~~~--~~~~v~~th~ETstGv~~~-------  148 (349)
T TIGR01364        82 VADYIVTGAWSKKAAKEAKKYGV-VNVV-ASGKEGNYTKIPDPSTWE--ISE--DAAYVHYCANETIHGVEFR-------  148 (349)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCC-cEEE-eccccCCCCCCCCHHhcC--CCC--CCCEEEEcCCCCcccEecc-------
Confidence            998888887664  477888898 6666 4332   33344555544  223  4699999999999999876       


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh---------
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV---------  260 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~---------  260 (400)
                       ++++.+++++++|.+++.   ++.+......+  ++++|.+|++|.+|  +|.++.+   ++..+++...         
T Consensus       149 -~l~~~~~~l~iVDavss~---g~~~id~~~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~~~~~~~~~~~~~~~~~  217 (349)
T TIGR01364       149 -ELPDVKNAPLVADMSSNI---LSRPIDVSKFG--LIYAGAQKNIGPAG--LTVVIVR---KDLLGRASRITPSMLNYKI  217 (349)
T ss_pred             -eecccCCCeEEEEccccc---cCccCCHHHcc--EEEEecccccCCCc--eEEEEEC---HHHHhhcccCCCCcchHHH
Confidence             455568999999999984   33344333333  88999999998555  6888888   5665544221         


Q ss_pred             -h--ccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCccc--CC--CCceEEEeeCCCCCC
Q 015768          261 -Q--DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVK--GG--EGAIYLWARLPEKHL  331 (400)
Q Consensus       261 -~--~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~--~~~~~~~~~~~~~~~  331 (400)
                       .  ....+++|....+++..+|+... + .++++.++++++.+++++.|++++++...  .+  .+...+.+.++... 
T Consensus       218 ~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~-  296 (349)
T TIGR01364       218 HAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE-  296 (349)
T ss_pred             HHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh-
Confidence             1  22345788888888888887532 2 37889999999999999999999643222  11  22345666666432 


Q ss_pred             CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       332 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ...++...+ .++|+++.+|..  ..+.+|+|+.. ++.+|++.+++.|++++++
T Consensus       297 ~~~~~~~~~-~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~  348 (349)
T TIGR01364       297 LEKRFLKEA-EERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK  348 (349)
T ss_pred             HhHHHHHHH-HHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            124555545 479997777653  34689999887 8999999999999987654

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.91  E-value=4.3e-22  Score=202.59  Aligned_cols=358  Identities=15%  Similarity=0.058  Sum_probs=226.5

Q ss_pred             HHHHH-HHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCC--cE
Q 015768           19 MVQIQ-ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS---KYGADEGLPELRDALVKKLNQENKLYKS--SV   92 (400)
Q Consensus        19 ~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~~~~~~a~~l~~~~~~~~~--~i   92 (400)
                      ...++ ..|..-.+++.|+.+.....++..|.+++.....+...+   .|..........+...+.+++.+|++++  .|
T Consensus        21 ~~~~R~~~fp~l~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~V  100 (805)
T PLN02724         21 IDELRATEFARLKGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYAC  100 (805)
T ss_pred             HHHHHHHHhhhcCCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEE
Confidence            34444 234343457888887655544555566555554432111   1211222234455555555556688665  58


Q ss_pred             EEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHH---HHhcCcEEEEeccCC--------CCCCCCCH--HHHHHh
Q 015768           93 MVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCS--------SKTLHPDA--DWLEKT  158 (400)
Q Consensus        93 ~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~--------~~~~~~~~--e~l~~~  158 (400)
                      +||+|+|+|++.++.++ .++||+|+++.-.|++....   ++..|+++..+ +.+        ..+ .+++  +.+++.
T Consensus       101 vFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v-~~~~~~~~~~~~~g-~~~~~~~~l~~~  178 (805)
T PLN02724        101 VFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAV-DIEEAANQPTNSQG-SVVVKSRGLQRR  178 (805)
T ss_pred             EEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEec-cchhcccccccccc-ccccchhhhhhh
Confidence            99999999999999998 57899999998888776643   34568888888 765        222 2332  556654


Q ss_pred             hc--------cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-----CCEEEEcccccccccCCCCccccCCCcEE
Q 015768          159 LE--------TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-----GSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       159 l~--------~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-----~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                      ++        .....++|.+++.+|.+|.++|.+.+..+.+.++.+     ++++++|.+++...   .+......+.++
T Consensus       179 ~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~---~piDv~~~~~Df  255 (805)
T PLN02724        179 NTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT---SPPDLSRYPADF  255 (805)
T ss_pred             hhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC---CCCChhhcCCCE
Confidence            31        012248999999999999999955433333322222     36799999998432   233333457789


Q ss_pred             EEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc------------------------cCCcCccHHHHHHHHHHhc
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------------------------NIPICASIISQHLALYSLQ  281 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~l~  281 (400)
                      ++.|++|++| +...+|+++.+   +++.+.+.....                        .-..++|.+...++.++++
T Consensus       256 l~~S~HK~~G-gP~G~G~L~vr---~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~  331 (805)
T PLN02724        256 VVVSFYKIFG-YPTGLGALLVR---RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK  331 (805)
T ss_pred             EEEecceecc-CCCCceEEEEe---hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH
Confidence            9999999997 23347888888   555555443211                        0122466666666666666


Q ss_pred             CCcH-HHHHHHHHHHHHHHHHHHHhccCC------CCcccCCC--------CceEEEeeCCCC---CCCHHHHHHHHHHh
Q 015768          282 TGPE-WVTERVKDLVRNREIIREALSPLG------EGAVKGGE--------GAIYLWARLPEK---HLDDFEVVRWLAHR  343 (400)
Q Consensus       282 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~l~~~  343 (400)
                      ...+ .+++..++..++.+++.+.|++++      .+.++++.        -+..+.+.+...   .....+ +.+++.+
T Consensus       332 ~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~-v~~l~~~  410 (805)
T PLN02724        332 LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHRE-VEKLASL  410 (805)
T ss_pred             HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHH-HHHHHHh
Confidence            4222 246667778888999999998875      34555432        123443444321   112233 4456678


Q ss_pred             cCeEEeCCCccCC-----------------------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACGC-----------------------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       344 ~gi~v~~g~~~~~-----------------------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +||.++.|..|..                                   .+.+|+|++. +|.+|++.+++.|++.+-.-
T Consensus       411 ~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~  489 (805)
T PLN02724        411 SGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST  489 (805)
T ss_pred             cCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence            8999999988741                                   2789999999 99999999999999977543

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=7.2e-22  Score=186.50  Aligned_cols=290  Identities=19%  Similarity=0.192  Sum_probs=192.0

Q ss_pred             HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCC
Q 015768           74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLH  149 (400)
Q Consensus        74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~  149 (400)
                      .+.+++.+++..|.  +..+++++|+.|+..++.++.++||+|++....|.+....    +...|++++.+ + +.    
T Consensus        71 ~~~Le~~lA~l~g~--~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-d~----  142 (436)
T PRK07812         71 QDVVEQRIAALEGG--VAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV-E-DP----  142 (436)
T ss_pred             HHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEE-C-CC----
Confidence            34455555544464  4578888899999999999999999999999999776643    34578888777 4 22    


Q ss_pred             CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768          150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS  229 (400)
Q Consensus       150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s  229 (400)
                      .|++.+++.+++++  ++|++++|+||+|.+.|   +++|.++|+++|+++|+|+++.....    ......+.++++.|
T Consensus       143 ~d~e~l~~ai~~~t--klV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~~pl~~GaDivv~S  213 (436)
T PRK07812        143 DDLDAWRAAVRPNT--KAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----IRPLEHGADIVVHS  213 (436)
T ss_pred             CCHHHHHHhCCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCchhcCCCEEEEe
Confidence            27899999888766  99999999999999999   89999999999999999999874322    12234567799999


Q ss_pred             cccccCCCcceeEEEEccCCc----------------------------HHHHHHHH-HhhccCCcCccHHHHHHHHHHh
Q 015768          230 FSKAYGMMGWRVGYIAYPSEV----------------------------EGFATQLL-KVQDNIPICASIISQHLALYSL  280 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~----------------------------~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l  280 (400)
                      ++|++|..|--+|.++..+..                            +++..+.. .........+++...+.+...|
T Consensus       214 ~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl  293 (436)
T PRK07812        214 ATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGL  293 (436)
T ss_pred             cccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCc
Confidence            999997666555554443210                            01110111 1222234556666666555555


Q ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          281 QTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      +.    +..+.++..+++..+.+.|++++.+. +..|                . .|-.+.+.+........++++.| +
T Consensus       294 ~t----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l-~  368 (436)
T PRK07812        294 ET----LSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNAL-T  368 (436)
T ss_pred             Cc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhC-C
Confidence            54    68888999999999999999987632 2222                1 23455566643211123344333 1


Q ss_pred             hcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          343 RHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       343 ~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      =..+.+.-|...                      + .++.+|||++.   |+.+++++.|.+++....+
T Consensus       369 l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl---Ed~~dli~dl~~Al~~~~~  434 (436)
T PRK07812        369 LHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI---EGIDDILADLEAGFAAAKA  434 (436)
T ss_pred             cceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhhc
Confidence            112222222221                      0 13579999997   6677888888888876543

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.91  E-value=1.2e-21  Score=186.84  Aligned_cols=346  Identities=13%  Similarity=0.115  Sum_probs=221.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCc-EEEeCChHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSS-VMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~-i~~~~g~t~  100 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+......  ..-..+.+.++++.|.+.....  ... +++++++++
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsE  113 (442)
T TIGR00709        36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT--LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGAD  113 (442)
T ss_pred             CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc--cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHH
Confidence            5678899998876  4443 789999999998876321111  1112355666777776654321  134 455689999


Q ss_pred             HHHHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cC-------c-----EEEEeccCCCC-C--CC----CCH----HH
Q 015768          101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG-------V-----THILVGPCSSK-T--LH----PDA----DW  154 (400)
Q Consensus       101 a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g-------~-----~~~~~~~~~~~-~--~~----~~~----e~  154 (400)
                      |++.+++...  ....+|+....+|++....... .|       .     .+..+ |..+. .  ++    .+.    +.
T Consensus       114 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  192 (442)
T TIGR00709       114 AVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFM-PYPHEYRCPFGIGGEAGSNASIEY  192 (442)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence            9999999764  2336899999999997754432 22       0     12222 22110 0  00    011    22


Q ss_pred             HHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEE
Q 015768          155 LEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNL  227 (400)
Q Consensus       155 l~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~  227 (400)
                      +++.+.    ....+.+++++..++..|. .+|.++++++.++|++||+++|.||++.+|...+..+...  .-..+++ 
T Consensus       193 ~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv-  271 (442)
T TIGR00709       193 FENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFV-  271 (442)
T ss_pred             HHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEE-
Confidence            333332    1123678888866555554 5899999999999999999999999999886655322111  1122344 


Q ss_pred             eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                       +++|.++ .|+++|+++.+   ++ .+.+.......+++.+++++.++.+.|+..++  ....++.+++.+++.+.|++
T Consensus       272 -~~gK~l~-~G~Pigav~~~---~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~L~~  343 (442)
T TIGR00709       272 -VMSKAVG-GGLPLAVLLIA---PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKD--DNLAQNAQERGERITSFLDD  343 (442)
T ss_pred             -EEccccc-CCcccEEEEEc---hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH
Confidence             3789998 58999999988   55 34443333456888999999999999975221  23445566666666666654


Q ss_pred             ----CCCCcccCCCCceEEEeeCCCCC--------C-----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCH
Q 015768          308 ----LGEGAVKGGEGAIYLWARLPEKH--------L-----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE  369 (400)
Q Consensus       308 ----~~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~  369 (400)
                          ++.+.-+... |.++.+.+....        .     ....+...++ ++|+.+.+...  ..+.+|+.++. +|+
T Consensus       344 l~~~~~~v~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~--~~~~l~~~Ppl~it~  419 (442)
T TIGR00709       344 MIKEHPCIGNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGR--EGEVFRLLCPITIDQ  419 (442)
T ss_pred             HHHhCCCeeeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEECCCCCCH
Confidence                3433333344 566666553210        0     1234555554 89999976432  25789999887 899


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 015768          370 DDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       370 ~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++++++++.+++.++.+
T Consensus       420 ~ei~~~~~~l~~~l~~~~~  438 (442)
T TIGR00709       420 EECEEGISRFKQAVEEALA  438 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988644

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK06541 hypothetical protein; Provisional

Probab=99.91  E-value=1.9e-21  Score=185.74  Aligned_cols=347  Identities=16%  Similarity=0.101  Sum_probs=224.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+.....  ......+...++++.+.+....+.+.++|++++++|++
T Consensus        49 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~--~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve  126 (460)
T PRK06541         49 DRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFP--LWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVE  126 (460)
T ss_pred             CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcc--ccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHH
Confidence            4578899998874  4454 68999999999988642110  11112344455666666554323478999999999999


Q ss_pred             HHHHHhcC-------C-CCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCCC----CCCCC-------
Q 015768          104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSK----TLHPD-------  151 (400)
Q Consensus       104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~----~~~~~-------  151 (400)
                      .+++....       + ..+|+....+|++....... .|.            .+..+ |...-    ++.-+       
T Consensus       127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  205 (460)
T PRK06541        127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRV-PNTNFYRAPELGDDPEAFGRW  205 (460)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEe-CCCccccccccCCCHHHHHHH
Confidence            99987642       1 36899999999887643322 111            11222 21110    01111       


Q ss_pred             -HHHHHHhhcc--CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEE
Q 015768          152 -ADWLEKTLET--KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVV  225 (400)
Q Consensus       152 -~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i  225 (400)
                       ++.+++.+..  ...+.+|+++..+++.|.+. |.+++++|.++|++||+++|+||++.++...+........  ..++
T Consensus       206 ~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDi  285 (460)
T PRK06541        206 AADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDI  285 (460)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCE
Confidence             3667777752  22356666665588899875 5899999999999999999999999766433322111111  1233


Q ss_pred             EEeccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       226 ~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +  +++|.+| +|+ ++|+++.+   +++.+.+...    ....+++.++++..++.+.|+...+  ....++.+++.++
T Consensus       286 v--t~gK~l~-~G~~pigav~~~---~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~--~~~~~~~~~~g~~  357 (460)
T PRK06541        286 I--TCAKGIT-SGYSPLGAMIAS---DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER--EGLLDHVRDNEPA  357 (460)
T ss_pred             E--Eeccccc-CCccceeEEEEc---HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence            3  5799998 786 99999998   6777766532    2335777888998888888875221  2455677777788


Q ss_pred             HHHHhccCC---CCcccCCCCceEEEeeCCCCC-----C-C------H-HHHHHHHHHhcCeEEeCCCccCCCCeEEEEe
Q 015768          301 IREALSPLG---EGAVKGGEGAIYLWARLPEKH-----L-D------D-FEVVRWLAHRHGVVVIPGGACGCRGHLRISF  364 (400)
Q Consensus       301 l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~-----~-~------~-~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~  364 (400)
                      |.+.|+++.   .+..+... |.++-+.+....     . +      . ..+...++ ++||++.+..  .+.+.+||++
T Consensus       358 l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~--~g~~~lrl~P  433 (460)
T PRK06541        358 FRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EAGLYCRADD--RGDPVVQLAP  433 (460)
T ss_pred             HHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hCCeEEEecC--CCCCEEEEEC
Confidence            877777652   22223344 555555542210     0 0      0 23455555 7999998732  1347899998


Q ss_pred             cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          365 GG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       365 ~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .. +|++++++++++|.++++++..
T Consensus       434 pl~~t~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06541        434 PLISGQEEFDEIEQILRSVLTEAWA  458 (460)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            86 7999999999999999987643

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.91  E-value=9.3e-22  Score=185.94  Aligned_cols=340  Identities=13%  Similarity=0.091  Sum_probs=223.8

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.......  ....+.+..+++.|.+....+.+.+++++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve  117 (428)
T PRK07986         40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVE  117 (428)
T ss_pred             CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence            4578899998875  4443 6899999999998864311111  112344566777776654433478999999999999


Q ss_pred             HHHHHhcC-------CCCEEEEeCCCccchhHHHHhc-Cc-------------EEEEeccCCCCCC-----CCCHHHHHH
Q 015768          104 NIVLTLCD-------AGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSKTL-----HPDADWLEK  157 (400)
Q Consensus       104 ~~~~~l~~-------~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~~~e~l~~  157 (400)
                      .+++....       +..+|+....+|++........ +-             .++.+ |.....+     .-|++++++
T Consensus       118 ~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~d~~~l~~  196 (428)
T PRK07986        118 VAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFA-PAPQSRFDGEWDERDIAPFAR  196 (428)
T ss_pred             HHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEE-CCCCcccchhhHHHHHHHHHH
Confidence            99997642       2368999999998865332211 21             11122 2111100     125677888


Q ss_pred             hhcc-CCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEecccc
Q 015768          158 TLET-KPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSK  232 (400)
Q Consensus       158 ~l~~-~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~sK  232 (400)
                      .+.. ...+.+|+++.. +...|. .++.+.+++|.++|++||+++|+||++.++...|..+.....  ..+++  +++|
T Consensus       197 ~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~--t~gK  274 (428)
T PRK07986        197 LMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL--CLGK  274 (428)
T ss_pred             HHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEE--Eech
Confidence            7752 223567777753 666676 457789999999999999999999999776444432211111  22344  5799


Q ss_pred             ccCCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768          233 AYGMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       233 ~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      .++ +| +.+|.++++   +++.+.+...     ....+++.++++..++.+.|+.-++  .+..++.+++.+++++.|+
T Consensus       275 ~l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~--~~~~~~~~~~g~~l~~~l~  348 (428)
T PRK07986        275 ALT-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES--GDWQQQVAAIEAQLREELA  348 (428)
T ss_pred             hhh-CCcccCcchhch---HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH
Confidence            997 77 588988888   7888777542     2456788899999998888875221  1345566666677776666


Q ss_pred             cC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          307 PL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       307 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      ++   +.+.-++.. |.+..+.+.... +...+...++ ++|+++.+.     .+.+|+.+.. .|++++++++++|.++
T Consensus       349 ~l~~~~~i~~vRg~-Gl~~~ve~~~~~-~~~~~~~~l~-~~Gl~~~~~-----g~~i~~~Ppl~it~~ei~~~~~~l~~~  420 (428)
T PRK07986        349 PLRDAPMVADVRVL-GAIGVVETTRPV-NMAALQRFFV-EQGVWIRPF-----GKLIYLMPPYIILPEQLQRLTAAVNRA  420 (428)
T ss_pred             HHhcCCCEEeEecc-ceEEEEEeCCcc-cHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            54   222222333 556666664322 3456777665 899999763     2589999877 8999999999999999


Q ss_pred             HHH
Q 015768          383 LEE  385 (400)
Q Consensus       383 l~~  385 (400)
                      +.+
T Consensus       421 l~~  423 (428)
T PRK07986        421 VQD  423 (428)
T ss_pred             Hhh
Confidence            864

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.91  E-value=8e-22  Score=166.93  Aligned_cols=322  Identities=16%  Similarity=0.178  Sum_probs=225.6

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p  121 (400)
                      .|..+++++|.++......  |+..+....+++.+|+..    |  .+.-+|++++|.++.++++.= -++|.+|++.+.
T Consensus        33 ~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~----G--KEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~  104 (384)
T KOG1368|consen   33 VPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELF----G--KEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDR  104 (384)
T ss_pred             CChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHh----C--ccceeeecccccccHHHHHHHhcCCCceEEeccc
Confidence            3567888888887765444  544555667777777765    4  466688888888888888775 469999999999


Q ss_pred             Cccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cC-----CCCeEEEEeCCCCCCc-cCCCHHHHHHHHH
Q 015768          122 YYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TK-----PTPKLVSVVNPGNPSG-TYIPERLLKRISD  191 (400)
Q Consensus       122 ~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~-----~~~~~v~l~~p~nptG-~~~~~~~l~~i~~  191 (400)
                      +|--.+   .+....|+.+.++ ...++| .++++++++.+. ++     +..++|.++|.+|.+| .++|.|++.++.+
T Consensus       105 ~HI~~~E~gg~s~l~gv~~~tv-~~e~dg-tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~  182 (384)
T KOG1368|consen  105 AHIHRYEQGGISQLAGVHVRTV-KNENDG-TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA  182 (384)
T ss_pred             hheeehhccChhhhccceeEee-eeCCCC-eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence            883322   3445678888888 444444 689999999997 22     3358999999876555 9999999999999


Q ss_pred             HHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc
Q 015768          192 LCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  269 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  269 (400)
                      +|++||+.++.|.+..+....  +.+....-...+-+---+||.+|.|   +|.++..+  ++++++.+.++.....++-
T Consensus       183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~--k~FI~kA~~~RKalGGGmR  257 (384)
T KOG1368|consen  183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGS--KDFIDKARHFRKALGGGMR  257 (384)
T ss_pred             HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEcc--HHHHHHHHHHHHHhcCchh
Confidence            999999999999997654432  2221111111122333568998644   57655443  8898888777766566665


Q ss_pred             HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       270 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                      .....+++..+...+.+ + ..+.-.+++..+.+.++..+.+++-.+ ...+++.+.+.....+.++++..+. ++||.+
T Consensus       258 QsGvLaaaaLval~~~~-~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~-k~gi~l  334 (384)
T KOG1368|consen  258 QSGVLAAAALVALDENV-P-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLE-KNGILL  334 (384)
T ss_pred             HHHHHHHHHHHHhhcch-H-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHH-HCCeEE
Confidence            55555555544432332 2 455566777888888888776555443 3367777776666678999999885 899999


Q ss_pred             eCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          349 IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       349 ~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .++.    ...+|+.+++ .++++++..+..+.+.+...
T Consensus       335 m~~~----s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q  369 (384)
T KOG1368|consen  335 MGGA----SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQ  369 (384)
T ss_pred             eecc----ccceEEEEEEecCHHHHHHHHHHHHHHHHhh
Confidence            9865    4459999999 99999999999995444433

>PLN02271 serine hydroxymethyltransferase

Probab=99.91  E-value=5.5e-21  Score=179.61  Aligned_cols=358  Identities=14%  Similarity=0.076  Sum_probs=249.1

Q ss_pred             hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcC
Q 015768           13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      ..+...+.-+.+..+.+..-|+|-.++|..  ++.|++++...+.+....+      |+.....++++....++..+.++
T Consensus       131 ~~Dpei~~li~~E~~rQ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~  208 (586)
T PLN02271        131 EADPDIHELMEKEKQRQFKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFG  208 (586)
T ss_pred             hhCHHHHHHHHHHHHHHhcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhC
Confidence            334555555566667777889998877664  5899999888876633222      33344456777777788888888


Q ss_pred             CCC----CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH---------HhcC--cEEEEeccCCCCCCCCC
Q 015768           87 LYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---------QMTG--VTHILVGPCSSKTLHPD  151 (400)
Q Consensus        87 ~~~----~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~---------~~~g--~~~~~~~~~~~~~~~~~  151 (400)
                      ++.    -+|... +++.|+..++.++++|||+|+..+..|.++....         ...|  ++.+.+ +++++...+|
T Consensus       209 ~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY-~~d~~~g~ID  286 (586)
T PLN02271        209 LDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPY-KVNPQTGYID  286 (586)
T ss_pred             Ccccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEc-ccccccCccC
Confidence            775    455555 6779999999999999999999988887766432         2345  345555 5766666799


Q ss_pred             HHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768          152 ADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF  230 (400)
Q Consensus       152 ~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~  230 (400)
                      .+++++... .+  ||+|++....+|  ..+|   ++++.++|+++|+++++|.+|..+...+..+.......+++++|.
T Consensus       287 yd~lek~a~~~r--PKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TT  359 (586)
T PLN02271        287 YDKLEEKALDFR--PKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTT  359 (586)
T ss_pred             HHHHHHHhhhcC--CeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCC
Confidence            999998544 44  599998877777  7788   888888999999999999999876654433322233478999999


Q ss_pred             ccccCCCcceeEEEEccCCc-----------------HHHHHHHHHhhcc-CCcCccHHHHHHHHHHhcC-CcHHHHHHH
Q 015768          231 SKAYGMMGWRVGYIAYPSEV-----------------EGFATQLLKVQDN-IPICASIISQHLALYSLQT-GPEWVTERV  291 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~-----------------~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~-~~~~~~~~~  291 (400)
                      +|++  .|.|.|.+..+++.                 +++.+++...... ...++......+.+.++.. ....++++.
T Consensus       360 HKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya  437 (586)
T PLN02271        360 HKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYM  437 (586)
T ss_pred             cccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHH
Confidence            9998  46666888876420                 2345555543321 1222222334444455553 124458999


Q ss_pred             HHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc
Q 015768          292 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG  366 (400)
Q Consensus       292 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~  366 (400)
                      +++.+|++.|.+.|.+.+...+.+......+++++.....++...-. ++++.||.+.--..++     .++.|||+...
T Consensus       438 ~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~-~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~a  516 (586)
T PLN02271        438 QQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEK-VCEMCHITLNKTAIFGDNGTISPGGVRIGTPA  516 (586)
T ss_pred             HHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHH-HHHHcCeEeccccCCCCCCCCCCCcccccCHH
Confidence            99999999999999998874455656578888898765546655554 5578999985433222     36789998653


Q ss_pred             -----CCHHHHHHHHHHHHHHHH
Q 015768          367 -----LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       367 -----~~~~~~~~~~~~l~~~l~  384 (400)
                           +.++|+.+..+.+.++++
T Consensus       517 lT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        517 MTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             HHhcCCCcHHHHHHHHHHHHHHh
Confidence                 466888888888888877

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.91  E-value=8.2e-22  Score=184.91  Aligned_cols=316  Identities=13%  Similarity=0.044  Sum_probs=211.9

Q ss_pred             CCcHH-HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeC-ChHHHHHHHHHHhcCC-CCEEEE
Q 015768           43 QPPKM-AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTA-GANQAFVNIVLTLCDA-GDSVVM  118 (400)
Q Consensus        43 ~~~~~-v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~-g~t~a~~~~~~~l~~~-gd~vlv  118 (400)
                      .+++. |++++.+.....    ........++.+.+.+.+++.++.+ +++|++++ |+|.+++.++.++.++ ++.|++
T Consensus        22 ~~~~~~v~~a~~~~~~~~----~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~   97 (378)
T PRK03080         22 KKRPGWQLEALADALLGR----SHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA   97 (378)
T ss_pred             CCChHHHHHHHHhhhccc----CcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE
Confidence            34566 999888654321    1122334566667777777777875 46798885 8999999999999875 444444


Q ss_pred             eCCCccc-hhH-HHHhcCc-EEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015768          119 FAPYYFN-SYM-SFQMTGV-THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA  195 (400)
Q Consensus       119 ~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~  195 (400)
                       ...|.. +.. ..+..|+ ++..+ +.+ ++..+|++.++    . +  ++|.+++.+|.||...|   +++|++  ++
T Consensus        98 -~g~f~~~~~~~~~~~~g~~~v~~~-~~~-~g~~~d~~~i~----~-~--~~V~~~h~~t~tG~~~p---i~~I~~--~~  162 (378)
T PRK03080         98 -WESFGSKWATDVVKQLKLEDPRVL-EAD-YGSLPDLSAVD----F-D--RDVVFTWNGTTTGVRVP---VARWIG--AD  162 (378)
T ss_pred             -eCHHHHHHHHHHHhhcCCCCceEe-ccC-CCCCCCHhhcC----C-C--CCEEEEecCCccceecc---chhhcc--cc
Confidence             455544 223 2356788 88888 665 44466766633    2 3  67899999999999999   777777  78


Q ss_pred             cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh--------------
Q 015768          196 AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ--------------  261 (400)
Q Consensus       196 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~--------------  261 (400)
                      +|+++++|.+++.+   ..+....  +.+++++|.+|+++ +..++|+++.+   ++..+++....              
T Consensus       163 ~g~~~vVDa~qs~G---~~pidv~--~iD~~~~s~~K~l~-~P~G~g~l~v~---~~~~~~~~p~~~~~~~~~~~~~~~~  233 (378)
T PRK03080        163 REGLTICDATSAAF---ALPLDWS--KLDVYTFSWQKVLG-GEGGHGMAILS---PRAVERLESYTPARPIPKFFRLTKG  233 (378)
T ss_pred             CCCeEEEecccccc---cCCCCHH--HCcEEEEehhhhCC-CCCceEEEEEC---HHHHHhhhcccCCCCCchhheeccc
Confidence            89999999999843   3333332  25799999999996 33457998888   66666654311              


Q ss_pred             ---------ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcccC--C--CCceEEEeeC
Q 015768          262 ---------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKG--G--EGAIYLWARL  326 (400)
Q Consensus       262 ---------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~~~~~~~~~~  326 (400)
                               ..+..+++.....++..+|+...+  ..+++.++.+++.+++++.|+++++..+..  +  .+...+.+.+
T Consensus       234 ~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~  313 (378)
T PRK03080        234 GKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDF  313 (378)
T ss_pred             hHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEc
Confidence                     111234555556554555553222  357778888999999999999887644432  1  2234555666


Q ss_pred             CCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          327 PEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       327 ~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +... ....++...++ ++|+.+..|......+.+|+|++. ++.+|++.+++.|+++++++.
T Consensus       314 ~~~~~~~~~~~~~~l~-~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~  375 (378)
T PRK03080        314 VDAQAAVDAAAVAKLL-RENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK  375 (378)
T ss_pred             CCchHHHHHHHHHHHH-HcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            6400 01234566665 568888776543345789999988 999999999999999887654

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.91  E-value=1.7e-21  Score=197.01  Aligned_cols=344  Identities=15%  Similarity=0.090  Sum_probs=243.5

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH----HH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN----QA  101 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t----~a  101 (400)
                      +..+|++++..+-+.+.-+..-+-...+.+  .++|.|.   +|..++.+.+.+++++..|.  +.|.|+++++    ++
T Consensus       524 ~~~~~plgsctmk~n~~~~~~~~~~~~~~~--~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a  599 (993)
T PLN02414        524 VHSMIPLGSCTMKLNATTEMMPVTWPEFAN--IHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYA  599 (993)
T ss_pred             ccCCccCcccccccCchhhhhhhcCcchhh--cCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHH
Confidence            456677777665553222222111111121  5566553   56667777888888888786  9999999999    89


Q ss_pred             HHHHHHHhcCC-CC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCC
Q 015768          102 FVNIVLTLCDA-GD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGN  175 (400)
Q Consensus       102 ~~~~~~~l~~~-gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~n  175 (400)
                      ++.+++++.++ ||    +|+++...|.+....+...|++++.+ |.+++| .+|+++|++.+++++ ..++|++++|+|
T Consensus       600 ~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v-~~d~~G-~vDle~L~~~i~~~~~~ta~V~vt~pSn  677 (993)
T PLN02414        600 GLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVV-GTDAKG-NINIEELRKAAEAHKDNLAALMVTYPST  677 (993)
T ss_pred             HHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhccCCCeEEEEEECCCc
Confidence            99999999866 88    89999999999988888899999999 888766 789999999998532 358999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC----CCcceeEEEEccCCcH
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVE  251 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~G~i~~~~~~~  251 (400)
                      .+|...+   +++|+++|+++|+++++|.++.....+  .......+.|++++|.+|+|+    .+|..+|++.++   +
T Consensus       678 ~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~~--l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~---~  749 (993)
T PLN02414        678 HGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQVG--LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---K  749 (993)
T ss_pred             cccccch---HHHHHHHHHHcCCEEEEEecCHHhccC--cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEc---h
Confidence            9999999   999999999999999999999743221  122335578899999999874    245568999888   5


Q ss_pred             HHHHHHHHhh-----------ccC-CcC------ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768          252 GFATQLLKVQ-----------DNI-PIC------ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA  312 (400)
Q Consensus       252 ~~~~~l~~~~-----------~~~-~~~------~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (400)
                      .+...+....           ... ..+      .+.....++..++.. |.+.+++..+....+++++++.|++...+.
T Consensus       750 ~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~  829 (993)
T PLN02414        750 HLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL  829 (993)
T ss_pred             hhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc
Confidence            5544433210           000 011      112333334444443 557778888889999999999998744444


Q ss_pred             ccCCCCce--EEEeeCCC----CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          313 VKGGEGAI--YLWARLPE----KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       313 ~~~~~~~~--~~~~~~~~----~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      +..+.+..  =+.++++.    ...+..++..+|+ ++||....-. |-.++.+|++++- .+.+|+|++++++.+...+
T Consensus       830 ~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Gihapt~~-~pv~~~lmiepTE~~skeelDrf~~al~~i~~e  907 (993)
T PLN02414        830 FRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHAPTMS-WPVPGTLMIEPTESESKAELDRFCDALISIREE  907 (993)
T ss_pred             ccCCCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEEeeec-cccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence            44443221  12234431    1245688999998 8999864422 3357899999987 8999999999999998888


Q ss_pred             Hhc
Q 015768          386 LVK  388 (400)
Q Consensus       386 ~~~  388 (400)
                      ..+
T Consensus       908 ~~~  910 (993)
T PLN02414        908 IAD  910 (993)
T ss_pred             HHH
Confidence            764

>PRK06062 hypothetical protein; Provisional

Probab=99.91  E-value=4e-21  Score=183.24  Aligned_cols=345  Identities=15%  Similarity=0.130  Sum_probs=221.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+....  .. .-..+.+.++++.|.+...-..+.++|++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~--~~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve  126 (451)
T PRK06062         50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTV--AP-AHANDARSEAARLIAERAPGDLSKVFFTNGGADANE  126 (451)
T ss_pred             CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCc--CC-ccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHH
Confidence            4578899998875  4454 7899999999998864321  11 112344566677766554323478999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc-----------EEEEeccCCC-C--CC--CCC-------HHHHHH
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-----------THILVGPCSS-K--TL--HPD-------ADWLEK  157 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~-----------~~~~~~~~~~-~--~~--~~~-------~e~l~~  157 (400)
                      .+++...  ....+|+....+|++....... .+.           .+..+ +.+. .  .+  .-+       ++.+++
T Consensus       127 ~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~le~  205 (451)
T PRK06062        127 HAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHF-FGPFLYRSEFHATTEEEECERALAHLER  205 (451)
T ss_pred             HHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEe-CCCCccccccCCCChHHHHHHHHHHHHH
Confidence            9999764  2336899999999887644322 211           11111 1110 0  01  012       577787


Q ss_pred             hhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768          158 TLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY  234 (400)
Q Consensus       158 ~l~~--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  234 (400)
                      .++.  ...+.+|+++..+...|.+ +|.+++++|.++|++||+++|+||++.+|...|..+.....+...-+.+++|.+
T Consensus       206 ~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~l  285 (451)
T PRK06062        206 VIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGV  285 (451)
T ss_pred             HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhh
Confidence            7752  2346788888666666775 688899999999999999999999999765433221111111112244678999


Q ss_pred             CCCcc-eeEEEEccCCcHHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHHHHHhcc---
Q 015768          235 GMMGW-RVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR-EIIREALSP---  307 (400)
Q Consensus       235 g~~g~-~~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~L~~---  307 (400)
                      | .|. ++|.++.+   +++.+.+...  ....+++.++++..++.+.|+..++  ....++.++.. +++++.|++   
T Consensus       286 g-gG~~Pigav~~~---~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~G~~~l~~~L~~l~~  359 (451)
T PRK06062        286 N-SGYVPLGGVAIS---EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE--EGIVENAARIGAEVLGPGLRELAE  359 (451)
T ss_pred             h-cCCcCcEEEEEc---HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            7 674 89999988   6777776532  3446888899999999998875221  12334444443 344444443   


Q ss_pred             -CCCCcccCCCCceEEEeeCCCC-----CC--------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHH
Q 015768          308 -LGEGAVKGGEGAIYLWARLPEK-----HL--------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC  372 (400)
Q Consensus       308 -~~~~~~~~~~~~~~~~~~~~~~-----~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~  372 (400)
                       .+.+..+... |.++-+.+...     ..        ....+...++ ++||++.+     ..+.+|+++.. +|++++
T Consensus       360 ~~~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~-----~~~~lrl~ppl~~t~~ei  432 (451)
T PRK06062        360 RHPSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFV-----NGNRIHVVPPCTVTEDEV  432 (451)
T ss_pred             cCCcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEee-----cCCEEEEECCccCCHHHH
Confidence             3432233344 45544444211     00        1235666665 79999865     24689999876 799999


Q ss_pred             HHHHHHHHHHHHHHhc
Q 015768          373 KAAADRLRRGLEELVK  388 (400)
Q Consensus       373 ~~~~~~l~~~l~~~~~  388 (400)
                      ++++++|.++++++..
T Consensus       433 d~~~~~l~~~l~~~~~  448 (451)
T PRK06062        433 REGLAILDAALAVADA  448 (451)
T ss_pred             HHHHHHHHHHHHHhhh
Confidence            9999999999987643

>PLN03032 serine decarboxylase; Provisional

Probab=99.91  E-value=5.2e-21  Score=176.46  Aligned_cols=309  Identities=12%  Similarity=0.048  Sum_probs=218.6

Q ss_pred             cHHHHHHHHHhhcCCCCCC---CCCCCCcHHHHHHHHHHHHhhcCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEE
Q 015768           45 PKMAMEKVKELVWDPSISK---YGADEGLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVV  117 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~---y~~~~g~~~~~~~~a~~l~~~~~~~~~~i--~~~~g~t~a~~~~~~~l~--~~gd~vl  117 (400)
                      .+.+++++...+.++...+   +.......++.+++.+++++.+|.+++++  ++|+|+|+|+..++.+..  .++..|+
T Consensus        36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi  115 (374)
T PLN03032         36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY  115 (374)
T ss_pred             ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence            4456788888776532222   22234568899999999999999988776  999999999999888765  3456899


Q ss_pred             EeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (400)
Q Consensus       118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~  196 (400)
                      ++.-.|+++..+++.+|..+..+ |.+++| .+|+++|++.+++++ .+.+|+++..+|++|.+.|   +++|+++|+++
T Consensus       116 ~s~~~H~Sv~kaa~~lg~~~~~V-~~d~~g-~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~  190 (374)
T PLN03032        116 ASRESHYSVFKAARMYRMEAVKV-PTLPSG-EIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL  190 (374)
T ss_pred             eCCCceeHHHHHHHHcCCCCeEe-eeCCCC-cCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh
Confidence            99999999999999999988888 888776 689999999998532 2578888889999999999   88999999999


Q ss_pred             C-----CEEEEcccccccccC----CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----
Q 015768          197 G-----SWLVVDNTYEYFMYD----GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----  263 (400)
Q Consensus       197 ~-----~~li~D~a~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~----  263 (400)
                      |     +|+++|.+++.+...    ...... ..+.+.+..|.||.+| .+..+|.++.++   +..+.+......    
T Consensus       191 g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~~~vDSis~s~HK~~g-~P~g~G~ll~r~---~~~~~~~~~~~Yl~~~  265 (374)
T PLN03032        191 GYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-RKPIGSVSVSGHKFLG-CPMPCGVALTRK---KHVKALSQNVEYLNSR  265 (374)
T ss_pred             CCCCCCeeEEEEccchhhhhhccCCCcccCC-CcCCcEEEECcccccC-CCcCeEEEEEEc---hhhHhhccCCcccCCC
Confidence            6     599999999865431    111111 1245677889999886 456689998884   444444221110    


Q ss_pred             -CCc--Ccc---HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768          264 -IPI--CAS---IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       264 -~~~--~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                       .+.  +-+   .+..++....  .+.+.+.++.++..++++++.+.|++.+...+..|. .+.+.++-+.    .+   
T Consensus       266 d~ti~gSR~g~~~l~~w~~l~~--~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~-~~~V~f~~~~----~~---  335 (374)
T PLN03032        266 DATIMGSRNGHAPLYLWYTLRR--KGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNEL-SSTVVFERPM----DE---  335 (374)
T ss_pred             CCcccCCCchHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCC-ceEEEEcCCC----cH---
Confidence             111  112   2333333222  356778899999999999999999998764455665 5666666552    11   


Q ss_pred             HHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                       .+.  +|..+.+     .++++|+++.. .+.+.++++++.|++
T Consensus       336 -~~~--~~w~l~~-----~~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        336 -AFI--KKWQLAC-----EGDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             -hHh--heeeecc-----cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence             122  4555553     23588998665 677888888877764

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.90  E-value=4.7e-22  Score=180.41  Aligned_cols=224  Identities=13%  Similarity=0.140  Sum_probs=156.5

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCC--
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT--  147 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--  147 (400)
                      ..+.++.+++++    |.+ +.+++++|+|.++..++.++++|||+|+++.++|.++...++..|++++++ +.+.+.  
T Consensus        61 i~~~~~~~A~~~----ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v-~~~~~~~~  134 (294)
T cd00615          61 IKEAQELAARAF----GAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYL-KPERNPYY  134 (294)
T ss_pred             HHHHHHHHHHHh----CCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEe-cCccCccc
Confidence            344555555554    643 345559999999999999999999999999999999999999999999888 554321  


Q ss_pred             ---CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC-CccccCCC
Q 015768          148 ---LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR-KHCCVEGD  222 (400)
Q Consensus       148 ---~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~-~~~~~~~~  222 (400)
                         ..++++.+++.++.++.++++++++| |++|.++|   +++|.++|+++|+++|+|++|+... +.+. +......+
T Consensus       135 ~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~  210 (294)
T cd00615         135 GIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG  210 (294)
T ss_pred             CcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcC
Confidence               36799999999975545699999998 78999999   8999999999999999999997432 3221 22223357


Q ss_pred             cEEEEeccccccCCCcceeEE-EEccCCcHHHHHHHHHh-hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~~~G~-i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      .++++.|+||++  +|++.|+ +..++.. ...+++... ....+.+++.+...++..++........++.+++.++.+.
T Consensus       211 ~div~~S~hK~l--~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~  287 (294)
T cd00615         211 ADIVVQSTHKTL--PALTQGSMIHVKGDL-VNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALY  287 (294)
T ss_pred             CcEEEEchhccc--chHhHHHHHHhCCCc-CCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            889999999987  5666554 4444321 112223222 1223455666666666655543222234556667777777


Q ss_pred             HHHHhc
Q 015768          301 IREALS  306 (400)
Q Consensus       301 l~~~L~  306 (400)
                      +++.|+
T Consensus       288 ~r~~l~  293 (294)
T cd00615         288 ARQEIN  293 (294)
T ss_pred             HHHHHh
Confidence            777664

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=2.4e-21  Score=183.58  Aligned_cols=286  Identities=18%  Similarity=0.168  Sum_probs=188.3

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~  145 (400)
                      ...+++.++++    .|.  +..++++++++|+..++.++.+|||+|+++.+.|.+...    .++..|++++.+ +.+ 
T Consensus        65 ~~~le~~lA~l----~g~--~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~-  136 (427)
T PRK05994         65 NAVLEERVAAL----EGG--TAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWA-DAD-  136 (427)
T ss_pred             HHHHHHHHHHH----hCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEE-CCC-
Confidence            34455555554    454  347888999999999999999999999999999987554    356789998888 532 


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                           |++.+++.+++++  ++|++++|+||+|.+.|   +++|.++|+++|+++|+|+++.....    ......+.++
T Consensus       137 -----d~~~l~~ai~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~----~~pl~~gaDi  202 (427)
T PRK05994        137 -----DPASFERAITPRT--KAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL----IRPIEHGADI  202 (427)
T ss_pred             -----CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc----CCccccCCcE
Confidence                 7889999998765  99999999999999999   88999999999999999999974322    1223456779


Q ss_pred             EEeccccccCCCcceeEEEEcc-CCc---------------HH-----HHHHHH----------HhhccCCcCccHHHHH
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYP-SEV---------------EG-----FATQLL----------KVQDNIPICASIISQH  274 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~-~~~---------------~~-----~~~~l~----------~~~~~~~~~~~~~~~~  274 (400)
                      ++.|++|++|.+|-.+|.++.. ...               ++     +.+.+.          .........+++...+
T Consensus       203 vv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~  282 (427)
T PRK05994        203 VVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAF  282 (427)
T ss_pred             EEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHH
Confidence            9999999997555444543332 100               00     111100          0111223345666666


Q ss_pred             HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHHH
Q 015768          275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       275 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~  336 (400)
                      .+...|+.    +..+.++..+++..+.+.|++++.+. +..|                . .+-.+.+.+........++
T Consensus       283 l~~~~l~t----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~  358 (427)
T PRK05994        283 LILTGIET----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKL  358 (427)
T ss_pred             HHHcCccc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHH
Confidence            55555554    67888899999999999999887632 2211                1 2345555664211112233


Q ss_pred             HHHHHHhcCeEEeCCCccC-----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          337 VRWLAHRHGVVVIPGGACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++.| +=..+.+.-|....                       .++.+|+|++.   |+.+++++.|.+||.+
T Consensus       359 ~~~l-~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~dl~~Al~~  426 (427)
T PRK05994        359 VSSL-KLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI---EDVDDIIADLEQALAK  426 (427)
T ss_pred             HHhC-CcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhh
Confidence            3322 11122222232210                       13579999997   6677788888888763

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.90  E-value=9.1e-21  Score=179.92  Aligned_cols=323  Identities=15%  Similarity=0.151  Sum_probs=213.0

Q ss_pred             EEcCCCCCCCCC-----cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           33 VSLAQGVVYWQP-----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        33 i~~~~~~~~~~~-----~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      ..|+.|.++.+.     +.+-++++.+.+.... ..+  .....++++++++++    |.  +++++++|+|+++..++.
T Consensus        26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-~~~--G~~~~~fe~~lA~~~----g~--~~~v~~~sGt~al~~aL~   96 (438)
T PRK15407         26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-LTT--GRFNDAFEKKLAEFL----GV--RYALLVNSGSSANLLAFS   96 (438)
T ss_pred             ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-ccC--ChhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHH
Confidence            345666654432     2344455555554432 122  233577888888887    43  468999999999999998


Q ss_pred             Hh---------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768          108 TL---------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (400)
Q Consensus       108 ~l---------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG  178 (400)
                      ++         .+|||+|+++.++|.++...+...|++++.+ +.+.+.+.+|++.+++.+++++  ++|++++   ++|
T Consensus        97 al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~v-dvd~~~~~id~~~le~~i~~~t--kaVi~~~---~~G  170 (438)
T PRK15407         97 ALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFV-DVELPTYNIDASLLEAAVSPKT--KAIMIAH---TLG  170 (438)
T ss_pred             HHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHcCcCC--eEEEEeC---CCC
Confidence            76         3789999999999999999999999999999 8877677889999999998766  9999875   356


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHH
Q 015768          179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      ...+   +.+|.++|++||+++|+|++++.+..-........+  ++.++||  +|.+. .| ..|++++++  +++.++
T Consensus       171 ~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g--d~~~fSf~~~k~~~-~g-eGG~l~t~d--~~l~~~  241 (438)
T PRK15407        171 NPFD---LAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG--DIATLSFYPAHHIT-MG-EGGAVFTND--PLLKKI  241 (438)
T ss_pred             Chhh---HHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC--ceEEEeCCCCCCcc-cc-CceEEEECC--HHHHHH
Confidence            6666   899999999999999999999866532222222222  3555566  56664 23 359999887  777776


Q ss_pred             HHHhhcc---------------------------------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 015768          257 LLKVQDN---------------------------------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRN  297 (400)
Q Consensus       257 l~~~~~~---------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  297 (400)
                      ++..+..                                       .++.++.+....+...|+    .+++..++-+++
T Consensus       242 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~----~l~~~~~~R~~~  317 (438)
T PRK15407        242 IESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLE----KLPGFIEARKAN  317 (438)
T ss_pred             HHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence            6654321                                       111233333444344443    356777777788


Q ss_pred             HHHHHHHhccCCC-Cccc-CCCC---ce-EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCc--cC------------C
Q 015768          298 REIIREALSPLGE-GAVK-GGEG---AI-YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGA--CG------------C  356 (400)
Q Consensus       298 ~~~l~~~L~~~~~-~~~~-~~~~---~~-~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~--~~------------~  356 (400)
                      ++++.+.|.+++. .... .+.+   .+ .+.+.++.. ..+.+++..+|. ++||.+.....  ..            .
T Consensus       318 a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~-~~GI~~~~~~~~~~~~~p~~~~~~~~~~  396 (438)
T PRK15407        318 FAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLE-ENKIGTRLLFAGNLTRQPYFKGVKYRVV  396 (438)
T ss_pred             HHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHH-HCCCCccccCCCccccChhhhhcCCCCC
Confidence            8888888987753 2221 1111   12 233444431 235788888875 78997653221  00            0


Q ss_pred             ----------CCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          357 ----------RGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       357 ----------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                                ...+-+-++. +++++++..++.|++++.
T Consensus       397 ~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        397 GELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             CCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence                      1234444444 789999999999998874

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.90  E-value=3.8e-21  Score=175.62  Aligned_cols=287  Identities=24%  Similarity=0.231  Sum_probs=205.4

Q ss_pred             HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCC
Q 015768           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSK  146 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~  146 (400)
                      ...++.+.+.+..+.|  .++.+.+++|+.|+..++.++.++||+|++....|.+....    ++..|+++.++++.   
T Consensus        62 nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~---  136 (396)
T COG0626          62 NPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG---  136 (396)
T ss_pred             CccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC---
Confidence            3444555555554444  57789999999999999999999999999999999887644    46788998887221   


Q ss_pred             CCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          147 TLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       147 ~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                          +.+.+++.+. +++  ++|+++.|+||+..+.|   |.+|+++++++|+++++|+++....+.    .+...+.+|
T Consensus       137 ----~~~~~~~~~~~~~t--k~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q----~PL~~GaDI  203 (396)
T COG0626         137 ----DDEALEAAIKEPNT--KLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ----RPLELGADI  203 (396)
T ss_pred             ----ChHHHHHHhcccCc--eEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc----ChhhcCCCE
Confidence                3445565665 365  99999999999999999   999999999999999999999854443    234557889


Q ss_pred             EEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       226 ~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  303 (400)
                      ++.|.+|.++. ..+=.|.+++++  +++.+.+..... .....+++...+.+.+.++.    +.-+++++.+++..+.+
T Consensus       204 VvhSaTKyl~GHsDvl~G~v~~~~--~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT----L~~Rm~~~~~nA~~IA~  277 (396)
T COG0626         204 VVHSATKYLGGHSDVLGGVVLTPN--EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT----LALRMERHNENALKIAE  277 (396)
T ss_pred             EEEeccccccCCcceeeeEEecCh--HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHHH
Confidence            99999999963 345568777675  667776643333 35566778888877777776    67888999999999999


Q ss_pred             HhccCCCC-cccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----------
Q 015768          304 ALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------  355 (400)
Q Consensus       304 ~L~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------  355 (400)
                      .|++.+.+ ++..|.                .|-.+.+.+... .+..++.+.| +-..+...-|....           
T Consensus       278 ~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~~~f~~~L-~l~~~a~SlGgveSLi~~pa~~th~  355 (396)
T COG0626         278 FLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSL-KLFKLAESLGGVESLISHPATMTHA  355 (396)
T ss_pred             HHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHHHHHHHhC-CccEEeccCCCcccccccccccCcc
Confidence            99998763 233332                345566677642 1233344433 22233333333220           


Q ss_pred             ------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 ------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 ------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                  .++-+|+|++.   |+.+++++.|++++...
T Consensus       356 ~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~  395 (396)
T COG0626         356 SIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA  395 (396)
T ss_pred             cCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence                        14689999997   77778888888888764

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=7.3e-21  Score=181.67  Aligned_cols=344  Identities=14%  Similarity=0.089  Sum_probs=221.9

Q ss_pred             hcCCCeEEcCCC-CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           27 RGAKNAVSLAQG-VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        27 ~~~~~~i~~~~~-~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      .+|+.++||..+ ...++ .+|++++++.+.+.+....   ...-..+...++++.|.+..+...+.++|++++++|++.
T Consensus        69 ~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~---~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~  145 (459)
T PRK06082         69 VDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFS---PRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGM  145 (459)
T ss_pred             CCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCc---cCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHH
Confidence            457889999743 23354 7899999999998763221   111123556677777776654334789999999999999


Q ss_pred             HHHHhc--CCCCEEEEeCCCccchhH-HHHhcCc------------EEEEeccCCC--C-CCC-C------CHHHHHHhh
Q 015768          105 IVLTLC--DAGDSVVMFAPYYFNSYM-SFQMTGV------------THILVGPCSS--K-TLH-P------DADWLEKTL  159 (400)
Q Consensus       105 ~~~~l~--~~gd~vlv~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~--~-~~~-~------~~e~l~~~l  159 (400)
                      +++...  ....+|+....+|++... .+...|.            .+..+ |...  . .+. .      .++.+++.+
T Consensus       146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i  224 (459)
T PRK06082        146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERI-PPAVSYRGAFPDADGSDVHYADYLEYVI  224 (459)
T ss_pred             HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEe-CCCcccccccCChhHHHHHHHHHHHHHH
Confidence            998764  233689998888888653 3322221            11222 2110  0 010 0      135577777


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCC
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~  237 (400)
                      .....+.+|+++..++..+...+.++++++.++|++||+++|+||++.++...|..+...  .-..+++  +++|.+| .
T Consensus       225 ~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv--~~gKgl~-g  301 (459)
T PRK06082        225 EKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDIL--CIGKGLG-G  301 (459)
T ss_pred             hcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEE--Eeccccc-C
Confidence            633346788877666665667899999999999999999999999999765444221111  1122344  4789997 6


Q ss_pred             c-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCc
Q 015768          238 G-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGA  312 (400)
Q Consensus       238 g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~  312 (400)
                      | +++|.++.+   +++...........+++.++++..++.+.|+.-++  .+..++.+++.++|++.|++    ++.+.
T Consensus       302 G~~P~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~  376 (459)
T PRK06082        302 GLVPIAAMITK---DKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ--EGLLEKVKADSQFMRERLLEMKAKYPLIG  376 (459)
T ss_pred             CCCcceEEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCee
Confidence            6 589999988   56554332111125788899999888888875221  23455566666666666654    34333


Q ss_pred             ccCCCCceEEEeeCCCCC----CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKH----LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~----~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      -+... |.++.+.+....    .+   ...+...++ ++||.+.+.    ..+.+|+++.. +++++++++++++.+++.
T Consensus       377 ~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~----~~~~i~~~Ppl~it~~eid~~~~~l~~~l~  450 (459)
T PRK06082        377 DVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVS----QGNVIQLSPPLIITREELTQALAILEEAIA  450 (459)
T ss_pred             eeeec-cceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEec----CCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence            33444 555555553211    01   234555555 899999763    25789999876 799999999999999999


Q ss_pred             HHhc
Q 015768          385 ELVK  388 (400)
Q Consensus       385 ~~~~  388 (400)
                      ++.+
T Consensus       451 ~~~~  454 (459)
T PRK06082        451 KICQ  454 (459)
T ss_pred             HHhh
Confidence            8744

>PRK07678 aminotransferase; Validated

Probab=99.90  E-value=8.4e-21  Score=181.22  Aligned_cols=345  Identities=15%  Similarity=0.107  Sum_probs=220.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....  ... ..+...++++.+.+..+. .+.++|++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~--~~~-~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e  119 (451)
T PRK07678         44 IQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFP--LTQ-SHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANE  119 (451)
T ss_pred             CCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccc--ccc-CCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHH
Confidence            4578899998775  3443 68999999999888642211  111 223445677777665432 358999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCCC-CCC-------CC---
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-TLH-------PD---  151 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-~~~-------~~---  151 (400)
                      .+++....       +| .+|+....+|++........ |.            .+..+ |.++. ...       .+   
T Consensus       120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  198 (451)
T PRK07678        120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHV-PPPDCYRMPGIESEDIYDLEC  198 (451)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEe-CCCccccccccCChHHHHHHH
Confidence            99998642       23 67999999999876443221 11            11222 21110 000       01   


Q ss_pred             HHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEE
Q 015768          152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVN  226 (400)
Q Consensus       152 ~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~  226 (400)
                      ++.+++.+.  ....+.+|+++..+...|.+ ++.++++++.++|++||+++|+||++.+|...|..+.....  ..|++
T Consensus       199 ~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv  278 (451)
T PRK07678        199 VKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII  278 (451)
T ss_pred             HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE
Confidence            233566664  12346888888666666765 68889999999999999999999999877544422111111  22333


Q ss_pred             EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                        +++|.+| .| +++|.++.+   +++.+.+..      .....+++.|+++..++.+.|+..++  +...++.+++.+
T Consensus       279 --t~gK~lg-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~--~~~~~~~~~~g~  350 (451)
T PRK07678        279 --TMAKGIT-SAYLPLSATAVK---KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN--ENLIERSAQLGE  350 (451)
T ss_pred             --Eeecccc-cCCcceeEEEEc---HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence              6689997 66 699999999   788777753      23467888999999999999885221  123344444445


Q ss_pred             HHHHHh----ccCCCCcccCCCCceEEEeeCCCCC-----CC---HHHHHHHHHHhcCeEEeCCCcc--CCCCeEEEEec
Q 015768          300 IIREAL----SPLGEGAVKGGEGAIYLWARLPEKH-----LD---DFEVVRWLAHRHGVVVIPGGAC--GCRGHLRISFG  365 (400)
Q Consensus       300 ~l~~~L----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~l~~~~gi~v~~g~~~--~~~~~iRi~~~  365 (400)
                      +|++.|    ++++.+.-+... |.++-+.+....     .+   ...+...++ ++||++.+....  ...+.+||++.
T Consensus       351 ~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~Gv~~~~~g~~v~~~~~~lrl~Pp  428 (451)
T PRK07678        351 LLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACK-EKGLIIGKNGDTVAGYNNVLTLSPP  428 (451)
T ss_pred             HHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCCcEEeecCccccCCCCEEEEECC
Confidence            554444    444543333344 455444542110     01   245666665 799999763221  23478999988


Q ss_pred             c-CCHHHHHHHHHHHHHHHHHH
Q 015768          366 G-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       366 ~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      . +|++|+++++++|.+++.++
T Consensus       429 l~it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        429 LVISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             CcCCHHHHHHHHHHHHHHHHhc
Confidence            7 89999999999999999764

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.90  E-value=7.7e-21  Score=181.21  Aligned_cols=345  Identities=12%  Similarity=0.067  Sum_probs=224.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+......  ..-..+.+.++++.+.+..+..-+.++|++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve  128 (453)
T PRK06943         51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML--AGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVE  128 (453)
T ss_pred             CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHH
Confidence            5578899998874  4454 789999999999876421111  0112345556777776654433368999999999999


Q ss_pred             HHHHHhc-------CC-CCEEEEeCCCccchhHHHH-hcCc------------EEEEeccCCC-CCC--C--------CC
Q 015768          104 NIVLTLC-------DA-GDSVVMFAPYYFNSYMSFQ-MTGV------------THILVGPCSS-KTL--H--------PD  151 (400)
Q Consensus       104 ~~~~~l~-------~~-gd~vlv~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~-~~~--~--------~~  151 (400)
                      .+++...       .+ ..+|+....+|++...... ..|-            .+..+ |... .+.  .        -+
T Consensus       129 ~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  207 (453)
T PRK06943        129 IALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVV-ASPDARGARPGETAADVAARA  207 (453)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEE-CCCCccccccCCCHHHHHHHH
Confidence            9999862       12 3689999999988663221 1110            11222 2111 010  0        12


Q ss_pred             HHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~-~~~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      ++.+++.+. ....+.+|+++. .+...|. ..|.++++++.++|++||+++|.||++.++...|..+.....+...-+-
T Consensus       208 ~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDiv  287 (453)
T PRK06943        208 LADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL  287 (453)
T ss_pred             HHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeE
Confidence            467777775 223468888886 3666776 5788999999999999999999999998875544322111111112233


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      +++|.++ +| +++|.++.+   +++.+.+..      .....+++.++++..++.+.|+..++  ++..++.++..+++
T Consensus       288 t~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~~~~~G~~l  361 (453)
T PRK06943        288 CLSKGIS-GGYLPLSLVLSR---DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE--DDVLARNARKSARL  361 (453)
T ss_pred             eeehhhc-cCcccceEEEEc---HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence            5589997 78 599999998   677776642      12456888899999999998875221  23444555555666


Q ss_pred             HHHhccC---CCCcccCCCCceEEEeeCCCCCC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHH
Q 015768          302 REALSPL---GEGAVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK  373 (400)
Q Consensus       302 ~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~  373 (400)
                      .+.|+++   +.+.-+... |.++-+.+.....    ....+...++ ++||++.+.     .+.+||++.. +|+++++
T Consensus       362 ~~~L~~l~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~~-~~Gll~~~~-----g~~l~~~Ppl~it~~eid  434 (453)
T PRK06943        362 RAALAPLAAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAAL-ERELLLRPI-----GTTVYLMPPYVLDDDEIA  434 (453)
T ss_pred             HHHHHHHhcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCcCCHHHHH
Confidence            6655543   332223344 5555556542111    1234566565 899999763     2469999776 7999999


Q ss_pred             HHHHHHHHHHHHHh
Q 015768          374 AAADRLRRGLEELV  387 (400)
Q Consensus       374 ~~~~~l~~~l~~~~  387 (400)
                      +++++|.+++.++.
T Consensus       435 ~~~~~l~~al~~~~  448 (453)
T PRK06943        435 WLAERTRATLDATL  448 (453)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999874

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.90  E-value=3.4e-21  Score=178.84  Aligned_cols=315  Identities=14%  Similarity=0.102  Sum_probs=221.5

Q ss_pred             CCcHHHHHHHHHhhcCC---CCCCCCCCCC---cHHHHHHHHHHHHhhcCCC-CCcEEEe-CChHHHHHHHHHHhcCCCC
Q 015768           43 QPPKMAMEKVKELVWDP---SISKYGADEG---LPELRDALVKKLNQENKLY-KSSVMVT-AGANQAFVNIVLTLCDAGD  114 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~---~~~~y~~~~g---~~~~~~~~a~~l~~~~~~~-~~~i~~~-~g~t~a~~~~~~~l~~~gd  114 (400)
                      ..|++|++++...+.+.   ..+.+....-   ..++.+.+.+.+++.++.+ ..+++++ +++|.+++.++..+..+|+
T Consensus        13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~   92 (360)
T PRK05355         13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGK   92 (360)
T ss_pred             CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCC
Confidence            46899999998886431   1222222222   3367777778888888874 3456555 7799999999999999999


Q ss_pred             EEEEeCCCccch--hHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH-hhccCCCCeEEEEeCCCCCCccCC-CHHHHHHH
Q 015768          115 SVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPSGTYI-PERLLKRI  189 (400)
Q Consensus       115 ~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~-~l~~~~~~~~v~l~~p~nptG~~~-~~~~l~~i  189 (400)
                      ++++...+.++.  .+.++..|.. ..+ ..++ ++. .+..++++ .++++  +++|.+++..+.||+.. +   +.+|
T Consensus        93 ~~l~i~~G~fg~r~~~~a~~~g~~-~~~-~~~~~~g~-~~~~~~~~~~l~~~--~~~V~~th~eTstGv~~~~---i~~i  164 (360)
T PRK05355         93 KADYVDTGSWSKKAIKEAKKYGEV-NVA-ASSEDDGF-TYIPPLDEWQLSDD--AAYVHYTSNETIDGTEFHE---LPDT  164 (360)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCCc-eEE-ecccccCC-CCCCChhhccCCCC--CCEEEEccCCCcceEecCc---cccc
Confidence            998887777664  4677888865 444 4333 443 34444444 66554  59999999999999998 5   5555


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh---------
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV---------  260 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~---------  260 (400)
                            +|+++++|.+++.+   +.+......+  ++++|.+|++|.+|  +|.++.+   +++.+++...         
T Consensus       165 ------~g~l~vVDavss~g---~~~idv~~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~l~~~~~~~~~~~~~~~  228 (360)
T PRK05355        165 ------GDVPLVADMSSDIL---SRPIDVSKFG--LIYAGAQKNIGPAG--LTIVIVR---EDLLGRALPSIPSMLDYKT  228 (360)
T ss_pred             ------CCCcEEEEcCcccc---CccCCHHHcc--EEEEeccccccCCc--eEEEEEC---HHHHhhcccCCChHHHHHH
Confidence                  79999999999843   3344333333  88999999998555  6888888   5666554431         


Q ss_pred             ---hccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCcc-cC--CCCceEEEeeCCCCCCC
Q 015768          261 ---QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAV-KG--GEGAIYLWARLPEKHLD  332 (400)
Q Consensus       261 ---~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~--~~~~~~~~~~~~~~~~~  332 (400)
                         .....+++|....+++..+|+.-. + .++++.++++++.+++++.|++++.... ..  ..+...+.+.++... +
T Consensus       229 ~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~-~  307 (360)
T PRK05355        229 HADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE-L  307 (360)
T ss_pred             HHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH-H
Confidence               112356788888888888888522 3 4788899999999999999999885322 11  123355667776542 3


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ..++...+. ++|+.+.+|..  ..+.+|+|+.. +|.+|++.+++.|+++++.
T Consensus       308 ~~~~~~~~~-~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~  358 (360)
T PRK05355        308 DKKFLAEAK-AAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR  358 (360)
T ss_pred             HHHHHHHHH-HCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            345555554 78999866652  35789999888 9999999999999997754

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.90  E-value=8e-21  Score=182.70  Aligned_cols=346  Identities=13%  Similarity=0.091  Sum_probs=223.7

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc-CCCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~-~~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..|.  ..++ .+|++++++.+.+.+..... .......+...++++.|.+.+ +.+.+.++|+++|++|+
T Consensus        86 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~-~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~  164 (504)
T PLN02760         86 INGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYH-SFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN  164 (504)
T ss_pred             CCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhcccee-cccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence            4678999998864  4443 78999999999988643210 001123455566777766553 22346799999999999


Q ss_pred             HHHHHHhc------C-CC-CEEEEeCCCccchhH-HHHhcCcE------------EEEeccCCC-CCC-----------C
Q 015768          103 VNIVLTLC------D-AG-DSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSS-KTL-----------H  149 (400)
Q Consensus       103 ~~~~~~l~------~-~g-d~vlv~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~-~~~-----------~  149 (400)
                      +.+++...      . ++ .+|+....+|++... .+...|..            +..+ +.+. ...           .
T Consensus       165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~  243 (504)
T PLN02760        165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHT-DCPHYWRFHLPGETEEEFST  243 (504)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEe-CCCcccccCCCCCcHHHHHH
Confidence            99999874      1 23 678999988888653 22222221            1111 1110 000           0


Q ss_pred             CCHHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          150 PDADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       150 ~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                      ...+++++.+.  ....+.+|+++..+...|.+ .|.+++++|.++|++||+++|+||++.+|...|........+...-
T Consensus       244 ~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD  323 (504)
T PLN02760        244 RLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD  323 (504)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc
Confidence            01245666664  12336778777666667765 5788999999999999999999999977754443221111122222


Q ss_pred             EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      +.+++|.+| .| +++|.++++   +++.+.+..       .....+++.++++..++.+.|+..++  ++..++.+++.
T Consensus       324 ivtlgK~lg-gG~~PigAv~~~---~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~--~~l~~~~~~~g  397 (504)
T PLN02760        324 LVSLAKALS-SAYMPIGAVLVS---PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE--RNIPEHVNKIA  397 (504)
T ss_pred             EEEeccccc-CCccccceEeec---HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence            557789997 56 589999988   788777653       23456888899999999999885221  24455666666


Q ss_pred             HHHHHHhccC---CCCcccCCCCceEEEeeCCCCCC--C--------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec
Q 015768          299 EIIREALSPL---GEGAVKGGEGAIYLWARLPEKHL--D--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG  365 (400)
Q Consensus       299 ~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~  365 (400)
                      ++|++.|+++   +.+.-+... |.++-+.+.....  +        ...+...++ ++||++.+.     .+.+|+++.
T Consensus       398 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~lrl~Pp  470 (504)
T PLN02760        398 PRFQDGIKAFSGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRGMLVRVA-----GDNIMMSPP  470 (504)
T ss_pred             HHHHHHHHHHhcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCCcEEEec-----CCEEEEECC
Confidence            6666666554   322223333 5555555532110  0        234556665 799999763     257999987


Q ss_pred             c-CCHHHHHHHHHHHHHHHHHHh
Q 015768          366 G-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       366 ~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      . +|++|+++++++|.+++.++.
T Consensus       471 l~it~eeid~~~~~l~~al~~~~  493 (504)
T PLN02760        471 LIITPEEVDELISIYGKALKATE  493 (504)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH
Confidence            6 799999999999999998874

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.90  E-value=4.9e-21  Score=181.26  Aligned_cols=342  Identities=13%  Similarity=0.072  Sum_probs=224.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+......  ..-..+.+..+++.+.+......+.++|++++++|++
T Consensus        41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve  118 (429)
T PRK06173         41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF--GGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVE  118 (429)
T ss_pred             CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHH
Confidence            5678899998764  4443 689999999998876321111  0112344456666666554323478999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhH-HHHhcCc-------------EEEEeccCCCCCC-----CCCHHHHH
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYM-SFQMTGV-------------THILVGPCSSKTL-----HPDADWLE  156 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~-~~~~~g~-------------~~~~~~~~~~~~~-----~~~~e~l~  156 (400)
                      .+++....       +| .+|+....+|++... .+...+.             .+..+ |.....+     .-+++.++
T Consensus       119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~l~~l~  197 (429)
T PRK06173        119 VAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFL-PQPSIKFGEEWNDEAIEPLQ  197 (429)
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEe-CCCCcccchhHHHHHHHHHH
Confidence            99987642       33 679999999988532 2211110             11122 2211100     01356677


Q ss_pred             Hhhc-cCCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccc
Q 015768          157 KTLE-TKPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~-~~~~~~~v~l~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~s  231 (400)
                      +.+. ....+.+|+++.. +...|.. +|.++++++.++|++||+++|+||++.++...|..+...  .-..+++  +++
T Consensus       198 ~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--~~g  275 (429)
T PRK06173        198 DLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIM--CIG  275 (429)
T ss_pred             HHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEE--Eee
Confidence            7775 2234688888864 7777775 788999999999999999999999997664434321111  1123344  479


Q ss_pred             cccCCCc-ceeEEEEccCCcHHHHHHHHH-----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          232 KAYGMMG-WRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       232 K~~g~~g-~~~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      |.++ +| +.++.++.+   +++.+.+..     +....++..+++...++.+.|+...+  ....++.+++.++|++.|
T Consensus       276 K~l~-gG~~p~~a~~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~L  349 (429)
T PRK06173        276 KALT-GGYLTLSATITT---EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE--SPWQQNIQRIEAQLKQEL  349 (429)
T ss_pred             hhhh-CCccccceEEec---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence            9996 77 478888888   677777642     23345677889999998888875221  134566677777777777


Q ss_pred             ccC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          306 SPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       306 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      +++   +.+.-+... +.+.-+.+.... +...+...+. ++||++.+.     .+.+||.+.. .+++++++++++|.+
T Consensus       350 ~~~~~~~~v~~vRg~-Gl~~~iel~~~~-~~~~i~~~l~-e~Gi~v~~~-----g~~l~~~Ppl~it~~ei~~~~~~l~~  421 (429)
T PRK06173        350 APAAEFDSVAEVRVL-GAIGVVEMKEPV-NMATLQPRFV-EHGIWVRPF-----GKLVYIMPPFIISPDELSQLTSGLLR  421 (429)
T ss_pred             HHhhcCCCeeeeecc-ceEEEEEeCCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEeCCccCCHHHHHHHHHHHHH
Confidence            654   211112233 666666665321 3566777665 789999763     2589999887 899999999999999


Q ss_pred             HHHHHh
Q 015768          382 GLEELV  387 (400)
Q Consensus       382 ~l~~~~  387 (400)
                      ++.+..
T Consensus       422 ~l~~~~  427 (429)
T PRK06173        422 VLKQEY  427 (429)
T ss_pred             HHHHHh
Confidence            998754

>PRK05965 hypothetical protein; Provisional

Probab=99.90  E-value=9.4e-21  Score=181.08  Aligned_cols=348  Identities=16%  Similarity=0.131  Sum_probs=225.3

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+..... .......+.+..+++.|.+......+.++|+++|++|++
T Consensus        43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve  121 (459)
T PRK05965         43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYAT-GYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD  121 (459)
T ss_pred             CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence            5678999998775  3443 68999999999988632110 000112234456666666554323468999999999999


Q ss_pred             HHHHHhcC-------C-CCEEEEeCCCccchhHHH-HhcCc------------EEEEeccCCC--C-CCCCC--------
Q 015768          104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSF-QMTGV------------THILVGPCSS--K-TLHPD--------  151 (400)
Q Consensus       104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~--~-~~~~~--------  151 (400)
                      .+++....       + ..+|+....+|++..... ...+.            .+..+ |...  . .+..+        
T Consensus       122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  200 (459)
T PRK05965        122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKI-PSPYPYRNPVGDDPQAIIAAS  200 (459)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEc-CCCcccccccCCChHHHHHHH
Confidence            99987641       2 267999999998875322 11111            11222 2110  0 00112        


Q ss_pred             HHHHHHhhcc--CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          152 ADWLEKTLET--KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~~--~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      ++.+++.+..  ...+.+|+++..+...|. .+|.++++++.++|++||+++|.||++.+|...|..+.....+...-+-
T Consensus       201 ~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv  280 (459)
T PRK05965        201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM  280 (459)
T ss_pred             HHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence            3567777752  134688888876776776 4688899999999999999999999999886544322221122222233


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +++|.+| .| +++|.++.+   +++.+.+..       .....+++.++++..++.+.|+..++  ++..++.++..++
T Consensus       281 ~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~g~~  354 (459)
T PRK05965        281 TVAKGLT-SGYVPMGAVLMS---DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE--GGLLANGQKAGPR  354 (459)
T ss_pred             Eechhhc-cCCcceeEEEEc---HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence            5689997 78 599999998   788776642       23456888999999999988875221  2344556666666


Q ss_pred             HHHHhccC---CCCcccCCCCceEEEeeCCCCC--C---C-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768          301 IREALSPL---GEGAVKGGEGAIYLWARLPEKH--L---D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  366 (400)
Q Consensus       301 l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~--~---~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-  366 (400)
                      |.+.|+++   +.+.-+... |.++-+.+....  .   +     ...+...++ ++||++.+.    +.+.+|+.+.. 
T Consensus       355 l~~~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gll~~~~----g~~~i~~~PpL~  428 (459)
T PRK05965        355 FAAGLDALRAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRAY-ANGLVFRAF----GDGVLGFAPALC  428 (459)
T ss_pred             HHHHHHhhccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHHH-hCCeEEEec----CCcEEEEECCCc
Confidence            66666553   322223333 555555553210  0   1     234555554 899999753    24679999876 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Q 015768          367 LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++++++++++|.+++.++.+
T Consensus       429 it~~ei~~~~~~l~~~l~~~~~  450 (459)
T PRK05965        429 CTEGEFDLIFERTRKTLDDVLA  450 (459)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Confidence            8999999999999999998744

>PRK06105 aminotransferase; Provisional

Probab=99.90  E-value=9.3e-21  Score=181.16  Aligned_cols=347  Identities=14%  Similarity=0.085  Sum_probs=224.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+.... ........+.+.++++.|.+....+.+.++|++++++|++
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve  123 (460)
T PRK06105         45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFY-HTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND  123 (460)
T ss_pred             CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCe-ecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            5678999998875  4453 7899999999998864211 0011112345556777776665433478999999999999


Q ss_pred             HHHHHhc------C-CC-CEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCC-CCC-----------CC
Q 015768          104 NIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSS-KTL-----------HP  150 (400)
Q Consensus       104 ~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~-~~~-----------~~  150 (400)
                      .+++...      . +| .+|+....+|++....... .+.            .+..+ |... ..+           ..
T Consensus       124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  202 (460)
T PRK06105        124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHT-GCPHYYRFGLPGESEEAFATR  202 (460)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEc-CCCcccccccCCCChHHHHHH
Confidence            9999853      1 22 5788888999886633211 111            11111 1110 000           00


Q ss_pred             CHHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          151 DADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       151 ~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                      .++++++.+.  ....+.+|+++..+...|.. .|.++++++.++|++||+++|+||++.++...|..+.....+...-+
T Consensus       203 ~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi  282 (460)
T PRK06105        203 LANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDI  282 (460)
T ss_pred             HHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCe
Confidence            1356777764  22346888888667667765 68999999999999999999999999776543322211111222224


Q ss_pred             eccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      .+++|.+| .| +++|.++.+   +++.+.+...       ....+++.|+++..++.+.|+.-++  ++..++.+++.+
T Consensus       283 ~~~gK~lg-gG~~P~~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~v~~~g~  356 (460)
T PRK06105        283 LVMSKQLS-SSYQPLSAVLMN---EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE--RDLVGNAAERGA  356 (460)
T ss_pred             eeeecccc-cCcccceEEEEc---HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence            47789997 56 689999998   7777766532       2346788899999998888875221  244555666666


Q ss_pred             HHHHHhccC---CCCcccCCCCceEEEeeCCCCC------CC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768          300 IIREALSPL---GEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  366 (400)
Q Consensus       300 ~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~  366 (400)
                      +|++.|+++   +.+..+... |.+.-+.+....      ..    ...+...++ ++||.+.+.     .+.+|+++..
T Consensus       357 ~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~~~-----g~~i~l~Ppl  429 (460)
T PRK06105        357 RLQARLRALADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAAH-EHGVISRAM-----GDTLAFCPPL  429 (460)
T ss_pred             HHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECCC
Confidence            666666554   332233344 555555542110      00    234665554 899999763     3689999887


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHhc
Q 015768          367 -LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       367 -~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       .+++|+++++++|.++++++..
T Consensus       430 ~it~~eid~~~~~l~~~l~~~~~  452 (460)
T PRK06105        430 IITAAQVDEMVDRFGRALDDVAA  452 (460)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHH
Confidence             7999999999999999988754

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.90  E-value=4e-21  Score=168.76  Aligned_cols=337  Identities=16%  Similarity=0.128  Sum_probs=243.6

Q ss_pred             CCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        30 ~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      +++--+++++ ..+..+|+|++|+.+.+++...+.-+  ...|.......+.+.|+.++.  .+.-++.++..-|+...+
T Consensus       171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--K~aALlFsSCfVANDstL  248 (570)
T KOG1360|consen  171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--KEAALLFSSCFVANDSTL  248 (570)
T ss_pred             CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--CcceeeeeeeeeccchHH
Confidence            5666666665 66678999999999999874322111  223444334444444444433  344455555667888888


Q ss_pred             HHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCC
Q 015768          107 LTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       107 ~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~  182 (400)
                      ..|.+  ||=.|+-.+..|.+....++..++.-..+ ..      -|+++|+++|+  +...||+|.++..+..+|.+.|
T Consensus       249 ftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IF-rH------ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp  321 (570)
T KOG1360|consen  249 FTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIF-RH------NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP  321 (570)
T ss_pred             HHHHHHCCCcEEeccccchHHHHHHhhhcCCcceee-cc------CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC
Confidence            77753  77788888888888888889888865555 22      27889999887  4445799999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                         |++|++++++||.+.++||++.-+.|+....     .......+++.+++.|+||+-|   |||...   ..+++.+
T Consensus       322 ---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat---~~LvDmi  392 (570)
T KOG1360|consen  322 ---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT---RKLVDMI  392 (570)
T ss_pred             ---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh---hhHHHHH
Confidence               9999999999999999999999877764321     1223456789999999998777   999988   6889999


Q ss_pred             HHhhccCCc--CccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768          258 LKVQDNIPI--CASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       258 ~~~~~~~~~--~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      +.+...+-|  +.++.....+..+++.. .+.....+++.+++..++++.|.++|. .+.+.. +..+-+++.... -..
T Consensus       393 RSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~Gi-PVi~~p-SHIiPv~vgda~-l~~  469 (570)
T KOG1360|consen  393 RSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGI-PVIPNP-SHIIPVRVGDAA-LAK  469 (570)
T ss_pred             HHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCC-cccCCC-cceeeeeccCHH-HHH
Confidence            887765444  45566565555555531 122367778889999999999999987 555443 566666665432 356


Q ss_pred             HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ++...|+.++||++-.-.++.   +...+||++.- .|++..+.+++.|..++.++.
T Consensus       470 ~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~  526 (570)
T KOG1360|consen  470 QASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG  526 (570)
T ss_pred             HHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            788889999999997665553   45689998665 689999999999999998763

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.90  E-value=2.4e-21  Score=181.01  Aligned_cols=308  Identities=20%  Similarity=0.227  Sum_probs=214.7

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~  123 (400)
                      ..+.++++.+.+.++....+  .....++++++++++    |  .++++.++++|.|+..++.++ .++||+|+++..++
T Consensus         4 ~~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~----g--~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~   75 (363)
T PF01041_consen    4 TEEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYF----G--VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTF   75 (363)
T ss_dssp             HHHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-
T ss_pred             CHHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHh----C--CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcc
Confidence            35677788888877643332  344677888888887    4  678999999999999999998 48999999999999


Q ss_pred             cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      .+...++...|++++++ +++++.+.+|++.+++.+++++  ++|+++   +..|...+   +.+|.++|++||+++|+|
T Consensus        76 ~~~~~ai~~~G~~pv~~-Di~~~~~~id~~~~~~~i~~~t--~ai~~~---h~~G~~~d---~~~i~~~~~~~~i~lIeD  146 (363)
T PF01041_consen   76 PATASAILWAGAEPVFV-DIDPETLNIDPEALEKAITPKT--KAILVV---HLFGNPAD---MDAIRAIARKHGIPLIED  146 (363)
T ss_dssp             THHHHHHHHTT-EEEEE--BETTTSSB-HHHHHHHHHTTE--EEEEEE----GGGB------HHHHHHHHHHTT-EEEEE
T ss_pred             hHHHHHHHHhccEEEEE-eccCCcCCcCHHHHHHHhccCc--cEEEEe---cCCCCccc---HHHHHHHHHHcCCcEEEc
Confidence            99999999999999999 9998999999999999999887  999866   45677777   999999999999999999


Q ss_pred             ccccccccCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-----------------C
Q 015768          204 NTYEYFMYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-----------------I  264 (400)
Q Consensus       204 ~a~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~-----------------~  264 (400)
                      .+++.+..-........++  +.++||  +|.+.  ....|++++++  +++.++++.++..                 .
T Consensus       147 ~a~a~g~~~~g~~~G~~gd--~~~fSf~~~K~i~--~geGG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~  220 (363)
T PF01041_consen  147 AAQAFGARYKGRPVGSFGD--IAIFSFHPTKIIT--TGEGGAVVTND--PELAERARALRNHGRSRDAFRRYRHELPPGY  220 (363)
T ss_dssp             -TTTTT-EETTEETTSSSS--EEEEESSTTSSS---SSS-EEEEEST--HHHHHHHHHHTBTTEETSECSTTEESSSS--
T ss_pred             cccccCceeCCEeccCCCC--ceEecCCCCCCCc--CCCCeeEEecH--HHHHHHhhhhhccCcCccccccccccccCCc
Confidence            9999765422222222333  555565  68874  33458998887  7888888775532                 2


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCC-----ceEEEeeCCCCC-CCHHHHH
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG-----AIYLWARLPEKH-LDDFEVV  337 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~-----~~~~~~~~~~~~-~~~~~~~  337 (400)
                      .+.++.+....+...|+.    +++..++-+++.+.+.+.|.+++.+... .+..     .+.+.+.++... .+.+++.
T Consensus       221 n~rm~~~~AAigl~QL~~----L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~  296 (363)
T PF01041_consen  221 NFRMSELQAAIGLAQLKR----LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELV  296 (363)
T ss_dssp             B-B-BHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHH
T ss_pred             ccccHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHH
Confidence            234666666666666665    6777777788889999999998764222 1111     122344555321 2577888


Q ss_pred             HHHHHhcCeEEeCCCc-c-C------C----------------CCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGA-C-G------C----------------RGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~-~-~------~----------------~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                      +.|. +.||.+.+... + +      .                ...|.+-++. ++.++++..++.|+
T Consensus       297 ~~L~-~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  297 EALR-ARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             HHHH-HTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred             HHHH-HCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence            8775 78999987552 1 0      0                1256676665 88999888888764

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PLN02880 tyrosine decarboxylase

Probab=99.90  E-value=1.1e-20  Score=181.41  Aligned_cols=337  Identities=12%  Similarity=0.075  Sum_probs=233.9

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-------cEEEeCChHHHHHHHHHHhcC-----
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-------SVMVTAGANQAFVNIVLTLCD-----  111 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-------~i~~~~g~t~a~~~~~~~l~~-----  111 (400)
                      .++.++..+.....++....|...+....+++.+.+|+.+.+|.+.+       .-++|+|+|+++..++.+.++     
T Consensus        94 ~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~  173 (490)
T PLN02880         94 SVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRK  173 (490)
T ss_pred             cHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHH
Confidence            34555555554444544555656677889999999999999998753       478899999999888877542     


Q ss_pred             ------CCCEEEEeCCCccchhHHHHhcCcE---EEEeccCCC-CCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCC
Q 015768          112 ------AGDSVVMFAPYYFNSYMSFQMTGVT---HILVGPCSS-KTLHPDADWLEKTLET----KPTPKLVSVVNPGNPS  177 (400)
Q Consensus       112 ------~gd~vlv~~p~~~~~~~~~~~~g~~---~~~~~~~~~-~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~npt  177 (400)
                            +.-.|++++-+|+++..+++.+|+.   ++.| |.++ +++.+|++.|++.+..    +..|-+|+.+..+..+
T Consensus       174 ~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V-p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~  252 (490)
T PLN02880        174 VGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL-KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSS  252 (490)
T ss_pred             hcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe-ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcC
Confidence                  1125667888999999999999983   6778 8875 3468999999999862    2235666767788999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccC-CCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      |.+.|   +++|+++|++||+|+++|.+|+.+......+.  ... ...+-+..++||+++ .+..+|.+..++. ..+.
T Consensus       253 GaiDp---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~-~~l~  327 (490)
T PLN02880        253 TAVDP---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDR-NALI  327 (490)
T ss_pred             cccCc---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCH-HHHH
Confidence            99999   99999999999999999999997754322211  111 245677889999995 6788999988852 2232


Q ss_pred             HHHHHhhc---c-----------CCcCc------cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          255 TQLLKVQD---N-----------IPICA------SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       255 ~~l~~~~~---~-----------~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      +.+..-..   .           ..++.      ..+..++....  .|.+.+.++.++..++++++.+.|++.+.+++.
T Consensus       328 ~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~--~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~  405 (490)
T PLN02880        328 QSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRL--YGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVV  405 (490)
T ss_pred             HHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            32221100   0           00010      12222222222  256777888888889999999999988776766


Q ss_pred             CCCCceEEEeeCCCCCCCH-------HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKHLDD-------FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+.....++++++....+.       .++.++|.++..+.+.+ ..+.+..++|++++.  +++++++.+++.|.+..++
T Consensus       406 ~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~  484 (490)
T PLN02880        406 TPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK  484 (490)
T ss_pred             cCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            6554667777775422121       34666666555666654 334457799999887  5679999999999999888


Q ss_pred             Hhcc
Q 015768          386 LVKD  389 (400)
Q Consensus       386 ~~~~  389 (400)
                      +..+
T Consensus       485 ~~~~  488 (490)
T PLN02880        485 LLGK  488 (490)
T ss_pred             HHHh
Confidence            7653

>PRK06917 hypothetical protein; Provisional

Probab=99.90  E-value=2.3e-20  Score=177.81  Aligned_cols=352  Identities=13%  Similarity=0.099  Sum_probs=225.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|+|.+++.+.+.+... .+... -..+.+.++++.|.+......+.++|++++++|++
T Consensus        28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~-~~~~~-~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve  105 (447)
T PRK06917         28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSF-VYRSQ-FTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANE  105 (447)
T ss_pred             CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcC-ccccc-cCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHH
Confidence            5688999998875  4454 689999999999987421 11111 12345566777776654323368999999999999


Q ss_pred             HHHHHhc-------CCC-CEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCC--C-CCC--------CC
Q 015768          104 NIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSS--K-TLH--------PD  151 (400)
Q Consensus       104 ~~~~~l~-------~~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~--~-~~~--------~~  151 (400)
                      .+++...       .+| .+|+....+|++....... .+.            .+..+ |...  . .+.        -+
T Consensus       106 ~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  184 (447)
T PRK06917        106 TAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTI-SAPYCYRCPVQKVYPTCQLAC  184 (447)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEe-CCCcccccccCCChHHHHHHH
Confidence            9999872       133 6899999999997744322 221            11112 1110  0 000        02


Q ss_pred             HHHHHHhhccC--CCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          152 ADWLEKTLETK--PTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       152 ~e~l~~~l~~~--~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                      ++.+++.++..  ..+.+|+++..+. ..|. ..+.+++++|.++|++||+++|+||++.+|...+........+...-+
T Consensus       185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi  264 (447)
T PRK06917        185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI  264 (447)
T ss_pred             HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE
Confidence            45667777522  2468888885554 4455 568999999999999999999999999876443322211111111113


Q ss_pred             eccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       228 ~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      .+++|.+| .|. ++|.++.+   +++.+.+...    ....+++.++++..++.+.|+.-++  ....++.+++.++|+
T Consensus       265 ~~~gK~l~-~G~~Pi~a~~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~  338 (447)
T PRK06917        265 MTLGKGLG-AGYTPIAATVVS---DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK--HNLPEKAAEKGEYLI  338 (447)
T ss_pred             EEeeehhc-cCCcceEEEEEc---HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHH
Confidence            46689997 775 89999998   7777766532    2345788899999998888875211  234455566666666


Q ss_pred             HHhcc----CCCCcccCCCCceEEEeeCCCC------CC----CHHHHHHHHHHhcCeEEeCCCc-c--CCCCeEEEEec
Q 015768          303 EALSP----LGEGAVKGGEGAIYLWARLPEK------HL----DDFEVVRWLAHRHGVVVIPGGA-C--GCRGHLRISFG  365 (400)
Q Consensus       303 ~~L~~----~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~l~~~~gi~v~~g~~-~--~~~~~iRi~~~  365 (400)
                      +.|++    .+.+.-+... |.++.+.+...      ..    ....+...++ ++||++.+... .  ...+.+|+++.
T Consensus       339 ~~L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Pp  416 (447)
T PRK06917        339 KGLQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPP  416 (447)
T ss_pred             HHHHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEECC
Confidence            65554    3332233344 55555554211      00    1344566665 79999987421 1  12478999988


Q ss_pred             c-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          366 G-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       366 ~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      . +|++|++.++++|.++++++.++
T Consensus       417 l~it~~eid~~~~~l~~~l~~~~~~  441 (447)
T PRK06917        417 MTITYSELDELLSIFAKSVEEMMQK  441 (447)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHHh
Confidence            6 79999999999999999998654

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.90  E-value=9.6e-21  Score=175.08  Aligned_cols=327  Identities=11%  Similarity=0.100  Sum_probs=215.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+....  +.. -..+...++++.+.+..+  .+.+++++++++|++
T Consensus        21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~--~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~SGseA~e   95 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVA--GPM-FEHEEKEEMLEELSKWVN--YEYVYMGNSGTEAVE   95 (364)
T ss_pred             CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCc--cCC-cCCHHHHHHHHHHHhhcC--CCEEEEeCchHHHHH
Confidence            5688999998875  4454 6799999999998863211  111 112344556666655544  468999999999999


Q ss_pred             HHHHHhc-CCC-CEEEEeCCCccchhHHHHhc--------CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768          104 NIVLTLC-DAG-DSVVMFAPYYFNSYMSFQMT--------GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus       104 ~~~~~l~-~~g-d~vlv~~p~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      .+++... .+| ++|+....+|++........        +..+... ......+ .|.+.+++.+.++  +++|+++..
T Consensus        96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~-~~~~~~~-~d~~~l~~~i~~~--~aAvivEpi  171 (364)
T PRK04013         96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVP-GFKHIPF-NDVEAAKEAITKE--TAAVIFEPI  171 (364)
T ss_pred             HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCC-CcEEecC-CCHHHHHHHhcCC--cEEEEEcCC
Confidence            9999875 234 89999999998876443221        1111000 0111111 1678888888654  488888876


Q ss_pred             CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768          174 GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  252 (400)
Q Consensus       174 ~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~  252 (400)
                      +...|. ..|.++++++.++|++||+++|+||++.++ ..|........+...-+-+++|.+| .|+++|.++.+.   +
T Consensus       172 ~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lg-gG~P~~a~~~~~---~  246 (364)
T PRK04013        172 QGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIG-NGVPVSLTLTNF---D  246 (364)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEeccccc-CCceeEEEEecc---c
Confidence            766666 457889999999999999999999999977 4443221111111112335689998 689999988873   3


Q ss_pred             HHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768          253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD  332 (400)
Q Consensus       253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (400)
                      +    .......+++.++++..++.+.|+.-++  ++..++.++   .+. .+.. +.+.-++.. |.++-+.+..   .
T Consensus       247 ~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~--~~l~~~~~~---~l~-~l~~-~~v~~vRG~-Gl~~gve~~~---~  311 (364)
T PRK04013        247 V----ERGKHGSTFGGNPLACKAVAVTLRILRR--ERLVEKAGE---KFI-EIKG-ERVVTTRGR-GLMIGIVLKK---P  311 (364)
T ss_pred             c----cCCCcCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHH---HHH-Hhcc-CcceeeeeC-cEEEEEEeCC---c
Confidence            3    2234557888999999999998875221  111122211   122 2222 322233344 6777777753   2


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ...+...++ ++|+++.+.    +.+.+||.+.. .+++++++++++|.+++.++.
T Consensus       312 ~~~i~~~~~-~~Gll~~~~----g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~  362 (364)
T PRK04013        312 VGKYVEELQ-NRGYLVHTA----GQRVIRLLPPLIISKDTMEEAKSAIEGVINDIL  362 (364)
T ss_pred             HHHHHHHHH-hCCcEEeeC----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence            456776665 799999763    24789999887 899999999999999998764

>PLN02590 probable tyrosine decarboxylase

Probab=99.90  E-value=2.5e-20  Score=178.86  Aligned_cols=336  Identities=14%  Similarity=0.069  Sum_probs=234.3

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-------CcEEEeCChHHHHHHHHHHhcC-----
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCD-----  111 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-------~~i~~~~g~t~a~~~~~~~l~~-----  111 (400)
                      .++.++..+.....+.....|...+...++++.+.+|+.+.+|.+.       ..-++++|+|+|+..++.+...     
T Consensus       142 ~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~  221 (539)
T PLN02590        142 SVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK  221 (539)
T ss_pred             cHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhh
Confidence            4556665555544454455666778889999999999999999875       3468899999999888776532     


Q ss_pred             ------CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCC-CCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCC
Q 015768          112 ------AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSK-TLHPDADWLEKTLET----KPTPKLVSVVNPGNPS  177 (400)
Q Consensus       112 ------~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~~~~e~l~~~l~~----~~~~~~v~l~~p~npt  177 (400)
                            +.-.|++++.+|+++..+++.+|+   +++.+ |.+.+ .+.+|++.|++.|..    ...|-+|+.+..+..+
T Consensus       222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V-p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t  300 (539)
T PLN02590        222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL-KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS  300 (539)
T ss_pred             hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE-eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence                  112566778899999999999998   57788 88753 468999999999963    2235667767788899


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-cC--CCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      |.+-|   +.+|+++|++||+|++||.+|+++..-...... ..  ...+=+..++||++. .+..+|.+..++. ..+.
T Consensus       301 GaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~-~~l~  375 (539)
T PLN02590        301 AAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWVKDR-YSLI  375 (539)
T ss_pred             cccCC---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEecCH-HHHH
Confidence            99999   999999999999999999999977643222111 11  223456668999996 6688999888862 1233


Q ss_pred             HHHHH---hhc---------------cCCcC--ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          255 TQLLK---VQD---------------NIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       255 ~~l~~---~~~---------------~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      +.+..   +..               ....+  ...+-.++....+  +.+.+.++.++..++++++.+.|++.+.+++.
T Consensus       376 ~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~--G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~  453 (539)
T PLN02590        376 DALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLY--GSENLRNFIRDHVNLAKHFEDYVAQDPSFEVV  453 (539)
T ss_pred             HHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            32211   110               00111  1233333333333  55778999999999999999999998877776


Q ss_pred             CCCCceEEEeeCCCCCCC-------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+.....+++++.....+       ..++.+++. +.|..........+..+||+++..  +++++++.+++.|.+...+
T Consensus       454 ~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~-~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~  532 (539)
T PLN02590        454 TTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVN-STGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK  532 (539)
T ss_pred             cCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            665567777776432111       135666665 455544444444556799999876  7899999999999998887


Q ss_pred             Hhc
Q 015768          386 LVK  388 (400)
Q Consensus       386 ~~~  388 (400)
                      +.+
T Consensus       533 ~~~  535 (539)
T PLN02590        533 FTR  535 (539)
T ss_pred             hcc
Confidence            765

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.90  E-value=1.7e-20  Score=178.43  Aligned_cols=343  Identities=14%  Similarity=0.097  Sum_probs=220.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSI-SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+... ..+   ....+.+..+++.+.+......+.+++++++++|+
T Consensus        43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~---~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~  119 (442)
T PRK13360         43 HDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF---QMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESV  119 (442)
T ss_pred             CCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC---CcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHH
Confidence            4578899998775  4453 789999999999876321 111   11234455677777655432246899999999999


Q ss_pred             HHHHHHhcC-------C-CCEEEEeCCCccchhHHH-HhcC------------cEEEEeccCCCC----CCCC-------
Q 015768          103 VNIVLTLCD-------A-GDSVVMFAPYYFNSYMSF-QMTG------------VTHILVGPCSSK----TLHP-------  150 (400)
Q Consensus       103 ~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~-~~~g------------~~~~~~~~~~~~----~~~~-------  150 (400)
                      +.+++....       + ..+|+....+|++..... ...|            ..+..+ |....    .+..       
T Consensus       120 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~  198 (442)
T PRK13360        120 DTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHL-PHTLDLARNAFSKGQPEHGA  198 (442)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEe-CCCchhhccccCCChHHHHH
Confidence            999987541       2 368999999998865322 1111            011222 22110    0100       


Q ss_pred             -CHHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          151 -DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       151 -~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                       .++.+++.+..  ...+.+|+++..+...|.. .+.+++++|.++|++||+++|+||++.++...|........+...-
T Consensus       199 ~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD  278 (442)
T PRK13360        199 ELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD  278 (442)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc
Confidence             14577777752  2335777777667677775 6788999999999999999999999976644333221111111111


Q ss_pred             EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      +.+++|.++ .| +++|.++.+   +++.+.+..       .....+++.+++...++.+.|+..++  ....++.+++.
T Consensus       279 ivt~gK~l~-gG~~P~gav~~~---~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g  352 (442)
T PRK13360        279 LLTCAKGLT-NGAIPMGAVFVS---SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--EGLLTRAARLA  352 (442)
T ss_pred             eeeeeeccc-cCccceEEEEEc---HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence            337799997 56 788998888   677776643       12346788899999988888875221  23556667777


Q ss_pred             HHHHHHhccCCC---CcccCCCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768          299 EIIREALSPLGE---GAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED  370 (400)
Q Consensus       299 ~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~  370 (400)
                      +++++.|+++..   +.-+... |.+.-+.+...    .....++...++ ++||++.++     .+.+||++.. +|++
T Consensus       353 ~~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~-----~~~lr~~Ppl~~t~~  425 (442)
T PRK13360        353 PYWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCF-EKGLMIRYT-----GDILALSPPLIIEEA  425 (442)
T ss_pred             HHHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCccCHH
Confidence            777777765432   1112222 33333333211    112346666665 789999763     3679999887 8999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 015768          371 DCKAAADRLRRGLEEL  386 (400)
Q Consensus       371 ~~~~~~~~l~~~l~~~  386 (400)
                      ++++++++|.++++++
T Consensus       426 eid~~~~~l~~~l~~~  441 (442)
T PRK13360        426 QIDELFDILAQALKET  441 (442)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999764

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=1.8e-20  Score=178.61  Aligned_cols=346  Identities=13%  Similarity=0.106  Sum_probs=221.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+......  .....+...++++.|.+......+.++|++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e  127 (457)
T PRK05639         50 VDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMI--GYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVD  127 (457)
T ss_pred             CCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccccc--CccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHH
Confidence            4578899998875  4454 789999999999876321111  1111234445666666554433468999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHHh-cC--------c-----EEEEeccCCCC-C--CC----CCH--------
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG--------V-----THILVGPCSSK-T--LH----PDA--------  152 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g--------~-----~~~~~~~~~~~-~--~~----~~~--------  152 (400)
                      .+++...  ....+|+....+|++....... .+        .     .++.+ |.... .  +.    .+.        
T Consensus       128 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~  206 (457)
T PRK05639        128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWI-PYPNPYRNPWGINGYEEPDELINRFL  206 (457)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEe-CCCccccccccccccCCHHHHHHHHH
Confidence            9999875  2346899999999886643221 11        1     12233 22210 0  00    012        


Q ss_pred             HHHHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEE
Q 015768          153 DWLEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVV  225 (400)
Q Consensus       153 e~l~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i  225 (400)
                      +.+++.+.    ....+.+|+++..+...|. ..|.+++++|.++|++||+++|+||++.+|...|..+...  .-..|+
T Consensus       207 ~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi  286 (457)
T PRK05639        207 DYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDL  286 (457)
T ss_pred             HHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCE
Confidence            23454442    1234688888866766777 5678899999999999999999999998764444321111  112334


Q ss_pred             EEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      +  .++|.+| .|+++|.++++   +++.+. .......+++.+++...++.+.|+.-++  ....++..++.++|++.|
T Consensus       287 v--~~gK~l~-gG~pi~av~~~---~~i~~~-~~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L  357 (457)
T PRK05639        287 I--IFGKGVA-SGMGLSGVIGR---KELMDL-TSGSALLTPAANPVISAAAEATLEIIEE--ENLLKNALKVGEFIKKRL  357 (457)
T ss_pred             E--Eechhhc-CCCcceeEEeh---HHHHhh-cCCCcccCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHH
Confidence            4  3789997 78999999998   677662 2222345777888888888888875221  234455555666666666


Q ss_pred             cc----CCCCcccCCCCceEEEeeCCCCC--CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHH
Q 015768          306 SP----LGEGAVKGGEGAIYLWARLPEKH--LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAA  375 (400)
Q Consensus       306 ~~----~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~  375 (400)
                      ++    .+.+.-+... |.++.+.+....  .+   ...+...++ ++|+++.+...  ..+.+||.+.. .|+++++++
T Consensus       358 ~~l~~~~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~g~--~~~~lr~~Ppl~it~~~id~~  433 (457)
T PRK05639        358 LEMKESFEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSYGM--FGNVIRITPPLVITKEIAEKG  433 (457)
T ss_pred             HHHHHhCCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEeCCCccCHHHHHHH
Confidence            55    3432233344 555555542211  11   335666665 79999976421  25799999887 899999999


Q ss_pred             HHHHHHHHHHHhc
Q 015768          376 ADRLRRGLEELVK  388 (400)
Q Consensus       376 ~~~l~~~l~~~~~  388 (400)
                      +++|.+++.+..+
T Consensus       434 ~~~l~~~l~~~~~  446 (457)
T PRK05639        434 LEIMERAIKDALA  446 (457)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988643

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.89  E-value=1.3e-20  Score=179.33  Aligned_cols=344  Identities=14%  Similarity=0.093  Sum_probs=221.3

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....  ......+....+++.|.+......+.++|+++|++|++
T Consensus        46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve  123 (445)
T PRK09221         46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAP--AFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVD  123 (445)
T ss_pred             CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            5678899998775  4454 78999999999887632111  10112234456777776554323468999999999999


Q ss_pred             HHHHHhcC-------C-CCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCC--CC--CC--------C
Q 015768          104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSS--KT--LH--------P  150 (400)
Q Consensus       104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~--~~--~~--------~  150 (400)
                      .+++....       + ..+|+....+|++....... .|.            .+..+ |...  ..  +.        .
T Consensus       124 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  202 (445)
T PRK09221        124 TALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHL-PHTLDLPENAFSKGQPEHGAE  202 (445)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEe-CCCccccccccCCChHHHHHH
Confidence            99987541       1 25799999999886533211 110            11222 2111  00  00        0


Q ss_pred             CHHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       151 ~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                      .++++++.+..  ...+.+|+++..+...|.. .+.++++++.++|++||+++|+||++.++...|........+...-+
T Consensus       203 ~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi  282 (445)
T PRK09221        203 LADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDI  282 (445)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCE
Confidence            13567777752  1336788888767777875 57889999999999999999999999866543332211111111113


Q ss_pred             eccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      .+++|.++ .| +++|.++.+   +++.+.+..       .....+++.+++...++.+.|+...+  ....++.+++.+
T Consensus       283 ~~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~--~~l~~~~~~~g~  356 (445)
T PRK09221        283 ITFAKGLT-NGAIPMGAVIAS---DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE--EDLFERAAELAP  356 (445)
T ss_pred             EEeccccc-cCcccceeeEEc---HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence            47789997 55 678999888   677776642       12345778899998888888875221  245667777778


Q ss_pred             HHHHHhccC---CCCcccCCCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH
Q 015768          300 IIREALSPL---GEGAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  371 (400)
Q Consensus       300 ~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  371 (400)
                      ++++.|+++   +.+.-+... |.+.-+.+...    .....++...++ ++||++.++     .+.+||++.. +++++
T Consensus       357 ~l~~~l~~l~~~~~v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~lr~~Ppl~~t~~e  429 (445)
T PRK09221        357 YFEDAVHSLKGLPHVIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCF-EKGLLVRYT-----GDTIALSPPLIIEKAQ  429 (445)
T ss_pred             HHHHHHHhhccCCCEEEEecC-ceEEEEEEecccccccchHHHHHHHHH-HCCeEEeec-----CCEEEEECCccCCHHH
Confidence            888777765   221222233 44444444321    112345666665 789999763     3689999877 89999


Q ss_pred             HHHHHHHHHHHHHHH
Q 015768          372 CKAAADRLRRGLEEL  386 (400)
Q Consensus       372 ~~~~~~~l~~~l~~~  386 (400)
                      +++++++|.+++.++
T Consensus       430 id~~~~~l~~~l~~~  444 (445)
T PRK09221        430 IDELVDALGDALRAV  444 (445)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999999764

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.89  E-value=2.6e-20  Score=177.65  Aligned_cols=338  Identities=15%  Similarity=0.132  Sum_probs=214.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.+|||..+.  ..++ .+|++.+++.+.+.+...  +..   ..+.+.++++.+.+.... .+.+.|++++|+|++
T Consensus        96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e  169 (474)
T PLN02482         96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACM  169 (474)
T ss_pred             CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHH
Confidence            4578899998776  3343 689999999999987532  222   234556677777665431 579999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHHh-c--CcEEE------EeccCC--C----CCCCCCHHHHHHhhcc-CCCC
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-T--GVTHI------LVGPCS--S----KTLHPDADWLEKTLET-KPTP  165 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~--g~~~~------~~~~~~--~----~~~~~~~e~l~~~l~~-~~~~  165 (400)
                      .+++...  ....+|+....+|+++.+.+.. .  +....      .+ |..  +    -.++ |++.+++.+.. ...+
T Consensus       170 ~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~n-d~~~l~~~l~~~~~~i  247 (474)
T PLN02482        170 GVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGV-PKAATSATLTAPYN-DLEAVKKLFEANKGEI  247 (474)
T ss_pred             HHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCC-CCCCCCCeEEecCC-ChHHHHHHHHhCCCce
Confidence            9999875  2337899999999997643211 1  10000      00 000  0    0111 68889888863 2336


Q ss_pred             eEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768          166 KLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI  244 (400)
Q Consensus       166 ~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i  244 (400)
                      .+|+++......|.+. +.+++++|.++|++||+++|+||++.++. .+........+....+.+++|.+| .|+++|.+
T Consensus       248 AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR-~g~~ga~~~~gv~PDi~t~gK~lg-gG~Pigav  325 (474)
T PLN02482        248 AAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFR-IAYGGAQEYFGITPDLTTLGKVIG-GGLPVGAY  325 (474)
T ss_pred             EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCee-cCcchHhHHhCCCCCEEEecchhh-CCCceEEE
Confidence            7777776667778765 57899999999999999999999998763 332111111111112347799998 78999999


Q ss_pred             EccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCC
Q 015768          245 AYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGE  317 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~  317 (400)
                      +++   +++++.+..   .....+++.+++...++.+.|+..++  .+..+++.++.++|++.|+++    +...+....
T Consensus       326 ~g~---~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v  400 (474)
T PLN02482        326 GGR---REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ--PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYI  400 (474)
T ss_pred             EEc---HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEccc
Confidence            888   788887753   22345777889998888888875221  234555666666666666553    221121222


Q ss_pred             CceEEE-eeCCCC-------CCC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          318 GAIYLW-ARLPEK-------HLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       318 ~~~~~~-~~~~~~-------~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+++.. +.-+..       ..+   ...+...++ ++||++.+....   .+ -+++. +|++|++++++++.+++.+
T Consensus       401 ~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~-~~Gv~~~~~~~~---~~-~psl~-ht~~dId~~l~al~~~l~~  473 (474)
T PLN02482        401 SGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGML-EEGVYLAPSQFE---AG-FTSLA-HTEEDIDFTIAAAERVLAR  473 (474)
T ss_pred             ceEEEEEEecCCccChhhhccCCHHHHHHHHHHHH-HCCeEEeccCCC---CC-cCCCC-CCHHHHHHHHHHHHHHHHh
Confidence            233321 211110       011   234566665 799999874321   11 13444 5999999999999999875

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.89  E-value=1.9e-20  Score=177.12  Aligned_cols=338  Identities=13%  Similarity=0.065  Sum_probs=220.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....+. .. ..+....+++.+.+......+.+++++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~-~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  114 (422)
T PRK05630         37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG-GL-THEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVE  114 (422)
T ss_pred             CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC-Cc-CCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence            5678899998875  4454 6899999999998864322111 11 1233456666666554323478999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCCCC-CCCC-C----HHHH
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCSSK-TLHP-D----ADWL  155 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~-~~~~-~----~e~l  155 (400)
                      .+++....       ++ .+|+....+|++....... .+-             ....+ |.... +... +    .+.+
T Consensus       115 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~  193 (422)
T PRK05630        115 VAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFA-PAPPVRGSSPQEISEYLRSL  193 (422)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEc-CCCcccCCChHHHHHHHHHH
Confidence            99997542       23 5799999999886533321 111             11222 22211 1000 1    2344


Q ss_pred             HHhhccCCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEeccc
Q 015768          156 EKTLETKPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFS  231 (400)
Q Consensus       156 ~~~l~~~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~s  231 (400)
                      ++.+..  .+.+|+++.. +...|. .++.+.++++.++|++||+++|+||++.++...|..+.....  ..|++  +++
T Consensus       194 ~~~~~~--~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~g  269 (422)
T PRK05630        194 ELLIDE--TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM--CVG  269 (422)
T ss_pred             HHHHhh--ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee--eee
Confidence            444443  3588888863 777777 467889999999999999999999999877544432211111  22333  778


Q ss_pred             cccCCCc-ceeEEEEccCCcHHHHHHHHHh------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          232 KAYGMMG-WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       232 K~~g~~g-~~~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      |.++ .| ..+|+++.+   +++.+.+...      ....+++.+++...++.+.|+...+  ....+++.++.+++++.
T Consensus       270 K~l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~--~~~~~~~~~~g~~l~~~  343 (422)
T PRK05630        270 KALT-GGFMSFAATLCT---DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET--GMWRKQVKRIEAELIAG  343 (422)
T ss_pred             chhh-cCccccceeecc---HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHHHH
Confidence            9996 56 578999998   6777776431      3356888999999998888875221  13344566666666666


Q ss_pred             hccC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          305 LSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       305 L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                      |+.+   +.+.-+... |.++-+.+.... +...+...++ ++|+++.+.     .+.+||.+.. .|++++++++++|.
T Consensus       344 L~~l~~~~~v~~vRg~-Gl~~~ie~~~~~-~~~~~~~~~~-~~Gl~~~~~-----g~~l~~~PpL~it~~~i~~~~~~l~  415 (422)
T PRK05630        344 LSPLAHLPGVADVRVL-GAIGVVEMEQPV-DMEEATQAAV-DHGVWLRPF-----GRLVYVMPPYITTSEQIAQICAALA  415 (422)
T ss_pred             HHHhhcCCCeeeeecc-ccEEEEEECCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEECCccCCHHHHHHHHHHHH
Confidence            6543   222223333 666666665321 3456776665 899999763     2689999887 89999999999999


Q ss_pred             HHHHH
Q 015768          381 RGLEE  385 (400)
Q Consensus       381 ~~l~~  385 (400)
                      +++++
T Consensus       416 ~al~~  420 (422)
T PRK05630        416 AAVKA  420 (422)
T ss_pred             HHHhc
Confidence            99865

>PRK07480 putative aminotransferase; Validated

Probab=99.89  E-value=2.2e-20  Score=178.17  Aligned_cols=347  Identities=12%  Similarity=0.060  Sum_probs=218.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+...... ......+.+..+++.+.+......+.+++++++++|++
T Consensus        47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  125 (456)
T PRK07480         47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT-FFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND  125 (456)
T ss_pred             CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            5578899998875  4454 689999999999886421110 00112355566777776654333468999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCcE------------EEEeccCCC--C-CCCCC--------
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGVT------------HILVGPCSS--K-TLHPD--------  151 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~--~-~~~~~--------  151 (400)
                      .+++....       +| .+|+....+|++....... .|..            +..+ +.+.  . ....+        
T Consensus       126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  204 (456)
T PRK07480        126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHI-DQPYWFGEGGDMTPEEFGLAA  204 (456)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeec-CCCcccccccCCChHHHHHHH
Confidence            99987642       33 5788989999886532211 1110            1111 1110  0 00001        


Q ss_pred             HHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      ++.+++.+.  ....+.+|+++..+...|.+ .|.+++++|.++|++||+++|+||++.+|...|..+.....+...-+.
T Consensus       205 ~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv  284 (456)
T PRK07480        205 ARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLM  284 (456)
T ss_pred             HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCee
Confidence            255655443  22336788888666667774 678889999999999999999999998775444322111112212234


Q ss_pred             ccccccCCCcc-eeEEEEccCCcHHHHHHHHH----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHH-HHHHHHHH
Q 015768          229 SFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDL-VRNREIIR  302 (400)
Q Consensus       229 s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~l~  302 (400)
                      +++|.++ .|. ++|.++.+   +++.+.+..    .....+++.++++..++.+.|+..++  ....++. .++.+++.
T Consensus       285 ~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~~g~~l~  358 (456)
T PRK07480        285 TIAKGLT-SGYIPMGAVGVG---DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD--EGIVERVRDDTGPYLQ  358 (456)
T ss_pred             eeehhhc-cCCccceEEEEc---HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Confidence            6789997 674 89999988   677776631    23456888999999999999975221  1233334 24444444


Q ss_pred             HHhc---cCCCCcccCCCCceEEEeeCCCCC------CC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CC
Q 015768          303 EALS---PLGEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LV  368 (400)
Q Consensus       303 ~~L~---~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~  368 (400)
                      +.|+   +++.+..+... |.+.-+.+....      .+    ...+...++ ++||++.+.     .+.+||++.. ++
T Consensus       359 ~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----~~~l~~~Ppl~it  431 (456)
T PRK07480        359 KRLRELADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHCF-ANGLIMRAV-----GDRMIISPPLVIT  431 (456)
T ss_pred             HHHHHhhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHHH-HCCcEEeec-----CCEEEEECCCCCC
Confidence            4443   34433333344 555555552211      01    134445554 899999752     3679999887 79


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q 015768          369 EDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       369 ~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++++++++|.+++.++.+
T Consensus       432 ~~eid~~~~~l~~al~~~~~  451 (456)
T PRK07480        432 HAEIDELVEKARKALDATAA  451 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998754

>PRK07483 hypothetical protein; Provisional

Probab=99.89  E-value=3.1e-20  Score=176.79  Aligned_cols=351  Identities=15%  Similarity=0.144  Sum_probs=221.7

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|.+.+++.+.+.+.....  ......+....+++.|.+......+.+++++++++|++
T Consensus        27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve  104 (443)
T PRK07483         27 ATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVE  104 (443)
T ss_pred             CCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHH
Confidence            4678999998875  4454 78999999999988642111  11112344556777776554323478999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCc------------EEEEeccCC-CCCC---CC--------
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCS-SKTL---HP--------  150 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~-~~~~---~~--------  150 (400)
                      .+++....       +| .+|+....+|++....... .|-            .+..+ |.. ....   ..        
T Consensus       105 ~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  183 (443)
T PRK07483        105 AALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHV-SPCYAYREQRAGESDEAYGQR  183 (443)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEe-CCCccccccccCCCHHHHHHH
Confidence            99997642       33 5799999999887643322 111            11112 111 0000   00        


Q ss_pred             CHHHHHHhhc--cCCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          151 DADWLEKTLE--TKPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       151 ~~e~l~~~l~--~~~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                      .++.+++.+.  ....+.+|+++..+. ..|. .++.++++++.++|++||+++|.||++.++...|..+.....+...-
T Consensus       184 ~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD  263 (443)
T PRK07483        184 LADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD  263 (443)
T ss_pred             HHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC
Confidence            1256666553  123367888886553 3454 56888999999999999999999999997754443221111111112


Q ss_pred             EeccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       227 ~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      +-+++|.++ .|+ ++|.++.+   +++.+.+...    ....+++.++++..++.+.|+.-++  ....++.++..++|
T Consensus       264 iv~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~--~~l~~~~~~~g~~l  337 (443)
T PRK07483        264 LVTIAKGLG-AGYQPIGAVLAS---DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE--DGLLANVRARGEQL  337 (443)
T ss_pred             eeeehhhhc-cCccccEEEEEc---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence            335689997 785 89999998   6777766532    2446888899999999988875221  23344455555555


Q ss_pred             HHHhc----cCCCCcccCCCCceEEEeeCCCCC-----CC-----HHHHHHHHHHhcCeEEeCCCcc--C-CCCeEEEEe
Q 015768          302 REALS----PLGEGAVKGGEGAIYLWARLPEKH-----LD-----DFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISF  364 (400)
Q Consensus       302 ~~~L~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~l~~~~gi~v~~g~~~--~-~~~~iRi~~  364 (400)
                      ++.|+    +++.+.-+... |.++-+.+....     .+     ...+...++ ++|+++.+....  + .++.+||.+
T Consensus       338 ~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~~~~~~~~~~~~l~~~P  415 (443)
T PRK07483        338 RARLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAM-ARGLMVYPMGGTIDGVRGDHVLLAP  415 (443)
T ss_pred             HHHHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHH-HCCcEEEecCccccCCCCCEEEEEC
Confidence            55554    44433333344 555555542110     01     235666665 799999764311  1 147899998


Q ss_pred             cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          365 GG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       365 ~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .. .+++++++++++|.+++.++..
T Consensus       416 pL~it~~eid~~~~~l~~~l~~~~~  440 (443)
T PRK07483        416 PFIITAAQIDEIVERLGDAIDAALA  440 (443)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            87 8999999999999999988654

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.89  E-value=3.2e-20  Score=176.74  Aligned_cols=341  Identities=14%  Similarity=0.099  Sum_probs=220.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....  ...-..+...++++.+.+..... .+.++|+++|++|+
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~  128 (441)
T PRK05769         51 VDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYS--LTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESN  128 (441)
T ss_pred             CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCcc--CcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence            4578899998875  4454 68999999999987642111  11112344566777776654322 36899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCCCC-C--CC---------CCHHH
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCSSK-T--LH---------PDADW  154 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~-~--~~---------~~~e~  154 (400)
                      +.+++...  ....+|+....+|++....... .+.             .+..+ |.... .  ++         ..++.
T Consensus       129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  207 (441)
T PRK05769        129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHV-PYPNPYRNPWGIENPEECGNAVLDF  207 (441)
T ss_pred             HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEe-CCCccccccccCCchHHHHHHHHHH
Confidence            99998764  2346899999999887744322 111             12222 22110 0  00         01234


Q ss_pred             HHH-hhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC--CCcEEEE
Q 015768          155 LEK-TLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNL  227 (400)
Q Consensus       155 l~~-~l~---~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~i~~  227 (400)
                      +++ +++   ....+.+|+++..+...|.. .+.+++++|.++|++||+++|+||++.++...+.......  -..+++ 
T Consensus       208 le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv-  286 (441)
T PRK05769        208 IEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII-  286 (441)
T ss_pred             HHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE-
Confidence            555 332   12336778777666667774 5788999999999999999999999997654442211111  112343 


Q ss_pred             eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                       +++|.+| .|+++|+++.+   +++..... .....+++.+++++.++.+.|+..++   +..++.+++.++|++.|++
T Consensus       287 -t~~K~l~-~G~p~gav~~~---~~i~~~~~-~~~~~T~~g~p~~~aaa~a~L~~l~~---~~~~~~~~~g~~l~~~L~~  357 (441)
T PRK05769        287 -TLAKAIA-GGLPLGAVIGR---AELMFLPP-GSHANTFGGNPVAAAAALATLEELEE---GLLENAQKLGEYLRKELKE  357 (441)
T ss_pred             -EEccccc-CCcccEEEEEe---hhhhhcCC-CCCCCCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence             5789998 78999999988   56654332 23445777899999998888875222   5566677777777777765


Q ss_pred             C----CCCcccCCCCceEEEeeCCCCCC-----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768          308 L----GEGAVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD  377 (400)
Q Consensus       308 ~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~  377 (400)
                      +    +.+.-+... |.++.+.+.....     ....+...++ ++||++.+.    ..+.+||++.. +|++|++++++
T Consensus       358 l~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~~~~----~~~~lr~~p~l~~t~~~id~~~~  431 (441)
T PRK05769        358 LKEKYEFIGDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLLLGA----GKSAIRIIPPLIITEEEADIGLE  431 (441)
T ss_pred             HHHhCCCeeeeecc-eEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEEecC----CCCEEEEeCCCCCCHHHHHHHHH
Confidence            3    322222233 5555555532100     1234555555 799999763    24789999887 89999999999


Q ss_pred             HHHHHHHHH
Q 015768          378 RLRRGLEEL  386 (400)
Q Consensus       378 ~l~~~l~~~  386 (400)
                      +|.+++.++
T Consensus       432 ~l~~~l~~~  440 (441)
T PRK05769        432 ILEEAIKEL  440 (441)
T ss_pred             HHHHHHHHh
Confidence            999999764

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=8.2e-21  Score=179.42  Aligned_cols=289  Identities=17%  Similarity=0.173  Sum_probs=190.5

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCC
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKT  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~  147 (400)
                      +..+.+++.+++..|.  +..+++++++.|+..++.++.++||+|+++...|.+..    ..++..|++++++ + ++. 
T Consensus        69 pt~~~le~~la~l~g~--~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-~~~-  143 (437)
T PRK05613         69 PTVEALENRIASLEGG--VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFV-E-NPD-  143 (437)
T ss_pred             hHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEE-C-CCC-
Confidence            3445555555555564  35566666669999999998999999999999998874    4457789999988 5 222 


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                         |++.+++.+++++  ++|+++++.||+|.+.|   +++|.++|+++|+++|+|.+++....    ......+.++++
T Consensus       144 ---d~e~l~~~l~~~t--k~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----~~p~~~GaDivv  211 (437)
T PRK05613        144 ---DPESWQAAVQPNT--KAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----VRPLELGADVVV  211 (437)
T ss_pred             ---CHHHHHHhCCccC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc----cChHHhCCCEEE
Confidence               7899999998776  89999899999999999   99999999999999999999874322    222344678999


Q ss_pred             eccccccCCCccee-EEEEccCCc--------------------------------HHHH-HHHHHhhccCCcCccHHHH
Q 015768          228 FSFSKAYGMMGWRV-GYIAYPSEV--------------------------------EGFA-TQLLKVQDNIPICASIISQ  273 (400)
Q Consensus       228 ~s~sK~~g~~g~~~-G~i~~~~~~--------------------------------~~~~-~~l~~~~~~~~~~~~~~~~  273 (400)
                      .|++|.++..|-.+ |.++.+...                                +++. +.............++...
T Consensus       212 ~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a  291 (437)
T PRK05613        212 ASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNA  291 (437)
T ss_pred             eeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence            99999997544433 445532110                                0000 1111222334556677777


Q ss_pred             HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHH
Q 015768          274 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       274 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~  335 (400)
                      +.+...|+.    +.-+++++.+++..+.+.|++++.+. +..|                . .|-.+.+.+........+
T Consensus       292 ~l~~rgl~T----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~  367 (437)
T PRK05613        292 WVTAQGLDT----LSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWA  367 (437)
T ss_pred             HHHHcccCc----HHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHH
Confidence            766666665    67888899999999999999887632 2111                1 134555666521111223


Q ss_pred             HHHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +++.| +=..+...-|...                      + .++.+|||++.   |+.+++++.|.+++..
T Consensus       368 f~~~l-~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dLi~Dl~~Al~~  436 (437)
T PRK05613        368 FIDAL-KLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI---EDIDDIIADLEGGFAA  436 (437)
T ss_pred             HHHhC-CcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence            33322 1111111112111                      0 14689999997   6677888888888864

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.89  E-value=4.5e-20  Score=176.41  Aligned_cols=345  Identities=13%  Similarity=0.081  Sum_probs=224.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....  ...-..+.+.++++.+.+......+.++|++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve  121 (466)
T PRK07030         44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVI--LAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIE  121 (466)
T ss_pred             CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            5578899998875  4443 68999999999987632111  10112344566777776554323468999999999999


Q ss_pred             HHHHHhcC-------C-CCEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCCC-----CC------CCC
Q 015768          104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-----TL------HPD  151 (400)
Q Consensus       104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-----~~------~~~  151 (400)
                      .+++....       + ..+|+....+|++........ |.            .+..+ |....     +.      .-+
T Consensus       122 ~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~  200 (466)
T PRK07030        122 VALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKV-PSPDCYLRPEGMSWEEHSRRM  200 (466)
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEc-CCCCccccccCCCHHHHHHHH
Confidence            99998631       2 367999999998876433222 21            11222 21110     00      002


Q ss_pred             HHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~-~~~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      ++.+++.+. ....+.+|+++. .+...|. ..+.++++++.++|++||+++|.||++.+|...+........+...-+-
T Consensus       201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv  280 (466)
T PRK07030        201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL  280 (466)
T ss_pred             HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE
Confidence            456677775 223467888776 3666676 5678899999999999999999999998775444322111111111233


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +++|.++ +| +++|.++.+   +++.+.+..       .....+++.++++..++.+.|+..++  .+..++.++..++
T Consensus       281 ~~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~G~~  354 (466)
T PRK07030        281 CLSKALT-GGYLPLAAVLTT---DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ--DNVIENNRALARR  354 (466)
T ss_pred             eeehhcc-CCcccceEEEec---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Confidence            5589997 78 599999998   788776642       23456888899999999998875221  2344555666666


Q ss_pred             HHHHhccC---CCCcccCCCCceEEEeeCCCCCC-------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768          301 IREALSPL---GEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  366 (400)
Q Consensus       301 l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-  366 (400)
                      +++.|+++   +.+.-+... |.++-+.+.....       +   ...+...++ ++|+++.+.     .+.+|+.+.. 
T Consensus       355 l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~i~~~Ppl~  427 (466)
T PRK07030        355 MAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL-----GSVVYFLPPYV  427 (466)
T ss_pred             HHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECCcc
Confidence            66666553   332223344 5666666532110       1   134666665 799999763     2589998776 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHh
Q 015768          367 LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ++++++++++++|.++++++.
T Consensus       428 it~~eid~~~~~l~~al~~~~  448 (466)
T PRK07030        428 ITPEQIDFLAEVASEGIDIAT  448 (466)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999999984

>PRK07046 aminotransferase; Validated

Probab=99.89  E-value=5.5e-20  Score=175.20  Aligned_cols=333  Identities=13%  Similarity=0.070  Sum_probs=213.7

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|.+.+++.+.+.+.....+     ..+...++++.+.+..+  .+.+.|++++|+|+.
T Consensus        72 ~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~-----~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e  144 (453)
T PRK07046         72 VDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTML-----PSEDAAWVGEELARRFG--LPYWQVATTATDANR  144 (453)
T ss_pred             CCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHH
Confidence            4578899997765  3343 789999999999987533222     23445566666666554  578999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHH-hc-CcEEEE---ec--c--CCC----CCCCCCHHHHHHhhccCCCCeEE
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MT-GVTHIL---VG--P--CSS----KTLHPDADWLEKTLETKPTPKLV  168 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~-g~~~~~---~~--~--~~~----~~~~~~~e~l~~~l~~~~~~~~v  168 (400)
                      .+++...  ...++|+....+|+++.+..- .. +.....   ..  +  ...    -.++ |++.+++.+.. ..+.+|
T Consensus       145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~-~~vAav  222 (453)
T PRK07046        145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-DLAALEAALAD-GDVAAV  222 (453)
T ss_pred             HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-CHHHHHHHhCC-CCeEEE
Confidence            9999875  234789999999999854321 10 100000   00  0  000    0111 78899988864 336788


Q ss_pred             EEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccc--cCCCCc-cccCCCcEEEEeccccccCCCcceeEEE
Q 015768          169 SVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFM--YDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYI  244 (400)
Q Consensus       169 ~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i  244 (400)
                      +++..+...|. ..+.++++++.++|++||+++|+||++. |.  +++... ....+  |+  .+++|.+| +|+++|.+
T Consensus       223 i~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~P--Di--~t~gK~lg-gG~Pi~av  296 (453)
T PRK07046        223 LAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEP--DF--LVVGKPIA-GGVPCAVY  296 (453)
T ss_pred             EECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCc--cc--eeehhhhc-CCCcceee
Confidence            88765555565 4567899999999999999999999986 32  222211 11222  33  35789998 78999999


Q ss_pred             EccCCcHHHHHHHHHh---------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh----ccCCCC
Q 015768          245 AYPSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGEG  311 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~~  311 (400)
                      +++   .++.+.+...         ....+++.++++..++.+.|+.-.+  .+..++.++..++|++.|    .+.+..
T Consensus       297 ~g~---~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~~~~  371 (453)
T PRK07046        297 GFS---AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT--EAAYAHMLALAARLAAGLRAVIARHGLP  371 (453)
T ss_pred             eeh---HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            998   7777777531         2345788899999999988874211  123334444444444444    445442


Q ss_pred             cccCCCCceEEEeeCCC-CCC---------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPE-KHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR  378 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~-~~~---------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~  378 (400)
                      ..+...+.+ +.+.+.. ...         +   ...+...++ ++||.+.|.     .+.+++++. ++++|+++++++
T Consensus       372 ~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~~~~~p~-~t~~did~~~~~  443 (453)
T PRK07046        372 WHVTRVGAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLL-NRGVLITPF-----HNMMLVCPA-TTAADVDRLVAA  443 (453)
T ss_pred             eEEEEeCcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHH-HCCCEEecc-----cCcEEEeCC-CCHHHHHHHHHH
Confidence            223333233 3333311 110         1   123455555 789999762     246788887 599999999999


Q ss_pred             HHHHHHHHh
Q 015768          379 LRRGLEELV  387 (400)
Q Consensus       379 l~~~l~~~~  387 (400)
                      +.++++++.
T Consensus       444 ~~~~l~~~~  452 (453)
T PRK07046        444 FDACLGELL  452 (453)
T ss_pred             HHHHHHHHh
Confidence            999998764

>PRK12403 putative aminotransferase; Provisional

Probab=99.89  E-value=7.3e-20  Score=175.05  Aligned_cols=345  Identities=12%  Similarity=0.057  Sum_probs=214.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+....+. ...+..+...++++.+.+..+...+.++++++|++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  129 (460)
T PRK12403         51 NDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM-FFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE  129 (460)
T ss_pred             CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            5678899997764  3343 689999999999987321110 01123345566666666554433478999999999999


Q ss_pred             HHHHHhc-------CCCC-EEEEeCCCccchhH-HHHhcCcE-----------EEEeccCCC---CCCCC--------CH
Q 015768          104 NIVLTLC-------DAGD-SVVMFAPYYFNSYM-SFQMTGVT-----------HILVGPCSS---KTLHP--------DA  152 (400)
Q Consensus       104 ~~~~~l~-------~~gd-~vlv~~p~~~~~~~-~~~~~g~~-----------~~~~~~~~~---~~~~~--------~~  152 (400)
                      .+++...       +++. .|+....+|++... .+...|..           +..+ |...   ..+..        ++
T Consensus       130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~  208 (460)
T PRK12403        130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHI-DEPYWYANGGELTPAEFGRRAA  208 (460)
T ss_pred             HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHHH
Confidence            9999875       2333 45566677777543 33222211           1222 2110   00000        13


Q ss_pred             HHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC--CCcEEEE
Q 015768          153 DWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNL  227 (400)
Q Consensus       153 e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~i~~  227 (400)
                      +.+++.+.  ....+.+|+++..+...|.+ .+.+++++|.++|++||+++|+||++.++...|.......  -..+++ 
T Consensus       209 ~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv-  287 (460)
T PRK12403        209 LQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL-  287 (460)
T ss_pred             HHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE-
Confidence            45655553  12335777777666667865 5788999999999999999999999987754443221111  112344 


Q ss_pred             eccccccCCCcc-eeEEEEccCCcHHHHHHHHH----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH-HHHHHH
Q 015768          228 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV-RNREII  301 (400)
Q Consensus       228 ~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~l  301 (400)
                       +++|.+| .|. .+|.++++   +++.+.+..    .....+++.++++..++.+.|+..++  ....++.+ ++.+++
T Consensus       288 -~~gK~lg-gG~~Piga~v~~---~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~--~~l~~~~~~~~g~~l  360 (460)
T PRK12403        288 -SIAKGLT-SGYVPMGGLVLS---KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD--EGVVTRVKDDTGPYL  360 (460)
T ss_pred             -EEccccc-ccccceEEEEEC---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHH
Confidence             4789997 674 89988888   677776642    12346778899999999998875221  12334443 444555


Q ss_pred             HHHhc----cCCCCcccCCCCceEEEeeCCCCC------CC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768          302 REALS----PLGEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  366 (400)
Q Consensus       302 ~~~L~----~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-  366 (400)
                      ++.|+    +.+.+.-+... |.+..+.+....      ..    ...+...++ ++|+++.+.     .+.+|+++.. 
T Consensus       361 ~~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----~~~~~l~Ppl~  433 (460)
T PRK12403        361 QRCLREVFGDHPLVGEVQGA-GLVAALQFAEDKATRKRFANENDLAWRCRTIGF-EEGVIIRST-----LGRMIMAPALV  433 (460)
T ss_pred             HHHHHHHHhcCCCEEeEeec-ceEEEEEEccCccccccccchhHHHHHHHHHHH-hCCEEEEec-----CCEEEEECCCC
Confidence            55444    44443334444 556555553211      00    112333334 799999752     2458999887 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Q 015768          367 LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .|++++++++++|.+++.++.+
T Consensus       434 it~~eid~~~~~l~~al~~~~~  455 (460)
T PRK12403        434 AGRAEIDELVDKTRIAVDRTAR  455 (460)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999998753

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.89  E-value=4.4e-21  Score=175.98  Aligned_cols=338  Identities=19%  Similarity=0.138  Sum_probs=213.8

Q ss_pred             chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHHhhcCCCC
Q 015768           16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYK   89 (400)
Q Consensus        16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~~~~~~a~~l~~~~~~~~   89 (400)
                      ...+.-+.+....++.-|+|-.+++..  +|.|++++...+.+....      -|+...-.+++++...++..+.+++++
T Consensus         6 ~ei~~li~~e~~rq~~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~   83 (399)
T PF00464_consen    6 PEIYELIEKEEERQRSTLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEP   83 (399)
T ss_dssp             HHHHHHHHHHHHHHHHSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-ST
T ss_pred             HHHHHHHHHHHHHHhcCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCc
Confidence            344445555556667889998887764  588888888877653322      233344456777778888888889874


Q ss_pred             CcEEE---eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-----H-----HhcCcEEEEeccCCCCCCCCCHHHHH
Q 015768           90 SSVMV---TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-----F-----QMTGVTHILVGPCSSKTLHPDADWLE  156 (400)
Q Consensus        90 ~~i~~---~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-----~-----~~~g~~~~~~~~~~~~~~~~~~e~l~  156 (400)
                      +.-..   .-+++.|+..++.+|++|||+|+..++.+.++...     .     .....+.+.+ +++++...+|.|.++
T Consensus        84 ~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y-~~d~~~~~ID~d~l~  162 (399)
T PF00464_consen   84 KEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPY-PVDPDTGLIDYDELE  162 (399)
T ss_dssp             TTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEE-EB-TTTSSB-HHHHH
T ss_pred             ccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEee-eeecCCCeECHHHHH
Confidence            43222   36677999999999999999999998887665421     1     2233578888 888777889999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccC
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g  235 (400)
                      +.+.... ||+|++...++|  ..+|   .+++.++|++.|.+++.|.+|..+.. ++....+... .+++++|.+|.+ 
T Consensus       163 ~~a~~~k-PklIi~G~S~y~--~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKtl-  234 (399)
T PF00464_consen  163 KLAKEHK-PKLIICGASSYP--RPID---FKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKTL-  234 (399)
T ss_dssp             HHHHHH---SEEEEE-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGGG-
T ss_pred             HHHhhcC-CCEEEECchhcc--CccC---HHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEeeccccc-
Confidence            9988544 699998754433  4456   78888888999999999999975544 3332233333 779999999998 


Q ss_pred             CCcceeEEEEccCC-----------cHHHHHHHHHhhccCCcC-ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHH
Q 015768          236 MMGWRVGYIAYPSE-----------VEGFATQLLKVQDNIPIC-ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       236 ~~g~~~G~i~~~~~-----------~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~  302 (400)
                       +|.|.|.|.++.+           .+++.+++...-.....+ +......+.+.++.+ ....++++.++..+|++.|.
T Consensus       235 -~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La  313 (399)
T PF00464_consen  235 -RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALA  313 (399)
T ss_dssp             --SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred             -cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence             6888999998810           168888888765433333 233333333344443 23457899999999999999


Q ss_pred             HHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc
Q 015768          303 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG  366 (400)
Q Consensus       303 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~  366 (400)
                      +.|.+.+...+.+.+....+++++.....++.+....| ++.||.+..-..+.     .+..|||+...
T Consensus       314 ~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~L-e~~gI~vnkn~iP~d~~~~~~sGlRlGT~~  381 (399)
T PF00464_consen  314 EALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKAL-EEAGIIVNKNTIPGDRSPFVPSGLRLGTPA  381 (399)
T ss_dssp             HHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHH-HHTTEE-EEE--TTTSTTTT-SEEEEESHH
T ss_pred             HHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHH-HhcCeeecccccCCCCCCCCCCEEEECCHH
Confidence            99999887444455557888999876555676666554 68999985322111     25689999764

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.89  E-value=2.2e-20  Score=178.46  Aligned_cols=347  Identities=14%  Similarity=0.142  Sum_probs=220.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC---CCcEEEe-CChH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMVT-AGAN   99 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~---~~~i~~~-~g~t   99 (400)
                      .+|+.++||..|.  ..++ .+|++.+++.+.+.+.....  ...-..+.+.++++.+.+.....   .+.++++ ++++
T Consensus        60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGS  137 (464)
T PRK06938         60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH--TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGT  137 (464)
T ss_pred             CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccc--ccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcH
Confidence            4578899998775  4444 78999999999986532111  11112344445666665443211   1357676 7999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCCCC---C--------CCCHH
Q 015768          100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSKT---L--------HPDAD  153 (400)
Q Consensus       100 ~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~---~--------~~~~e  153 (400)
                      +|++.+++...  ....+|+....+|++....... .|.            .+..+ |.+...   +        ..+++
T Consensus       138 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~  216 (464)
T PRK06938        138 DAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFL-PYPYDYRCPFGLGGEAGVRANLH  216 (464)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEe-CCCccccccccCchhhHHHHHHH
Confidence            99999999875  2236899999999887644322 110            12222 221100   0        01356


Q ss_pred             HHHHhhccC----CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          154 WLEKTLETK----PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       154 ~l~~~l~~~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      .+++.+...    ..+.+|+++..+...|.+ .|.++++++.++|++||+++|.||++.+|...|..+.....+...-+-
T Consensus       217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv  296 (464)
T PRK06938        217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV  296 (464)
T ss_pred             HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE
Confidence            777777531    236888887666666765 579999999999999999999999999875444322111112112233


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-
Q 015768          229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-  307 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-  307 (400)
                      +++|.+| .|+++|.++.+   +++ +.+.......+++.++++..++.+.|+.-++  .+..++.++..+++.+.|++ 
T Consensus       297 ~~gKglg-gG~PlsAv~~~---~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~--~~l~~~~~~~G~~l~~~L~~l  369 (464)
T PRK06938        297 VLSKAIG-GSLPLAVVVYR---EWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE--HRLAEHAAAMGERLREHLRQL  369 (464)
T ss_pred             Eeecccc-CCCceEEEeeh---hHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHH
Confidence            5589997 78999999988   454 4443334557888999999999998875221  23445555555666655554 


Q ss_pred             ---CCCCcccCCCCceEEEeeCCCCCC----------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768          308 ---LGEGAVKGGEGAIYLWARLPEKHL----------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED  370 (400)
Q Consensus       308 ---~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~  370 (400)
                         ++.+.-+... |.++.+.+.....          +   ...+...++ ++|+++.++..  ..+.+|+.+.. +|++
T Consensus       370 ~~~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g~--~~~~l~~~Ppl~it~~  445 (464)
T PRK06938        370 QRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGGR--HGSVVRFLPPLIITAE  445 (464)
T ss_pred             HHhCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEECCCccCHH
Confidence               4433333344 5666666532100          1   234555555 79999976432  24789999776 8999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 015768          371 DCKAAADRLRRGLEELV  387 (400)
Q Consensus       371 ~~~~~~~~l~~~l~~~~  387 (400)
                      +++.+++++.+++.++.
T Consensus       446 eid~~~~~l~~~l~~~~  462 (464)
T PRK06938        446 QIDEVAEIFAEAVAAAV  462 (464)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999998754

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.89  E-value=1.8e-20  Score=179.26  Aligned_cols=346  Identities=12%  Similarity=0.093  Sum_probs=223.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....  ...-..+.+.++++.|.+......+.+++++++++|++
T Consensus        53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve  130 (460)
T PRK06916         53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHST--LLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVE  130 (460)
T ss_pred             CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            4578899997765  3443 78999999999988632111  00012234556777776654323468999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCC-----CCCC------CC
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-----KTLH------PD  151 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-----~~~~------~~  151 (400)
                      .+++....       +| .+|+....+|++........ |.            .+..+ |...     .+..      .+
T Consensus       131 ~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~-p~p~~~~~~~~~~~~~~~~~~  209 (460)
T PRK06916        131 IAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKM-PYPYTYRSPYGNDKAEIVKKH  209 (460)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHH
Confidence            99997652       33 68999999998866433222 11            11222 2110     0000      13


Q ss_pred             HHHHHHhhc-cCCCCeEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~-~~~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      ++.+++.++ ....+.+|+++. .+...|.+ +|.++++++.++|++||+++|.||++.++...|..+.....+...-+.
T Consensus       210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv  289 (460)
T PRK06916        210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM  289 (460)
T ss_pred             HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee
Confidence            556677775 223468888886 46667765 689999999999999999999999998774444322111111111133


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +++|.++ .| +++|.++.+   +++.+.+..       .....+++.++++..++.+.|+.-++  ....++.+++.++
T Consensus       290 ~~gK~l~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~  363 (460)
T PRK06916        290 TAGKGLT-GGYLPIAITVTT---DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK--TNLIEQVARKTEY  363 (460)
T ss_pred             eeehhhh-cCccccceeeec---HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence            5689997 78 589999998   677766542       22445788899999888888875221  2345566666666


Q ss_pred             HHHHhccC---CCCcccCCCCceEEEeeCCCCC-------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768          301 IREALSPL---GEGAVKGGEGAIYLWARLPEKH-------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  366 (400)
Q Consensus       301 l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-  366 (400)
                      +++.|+++   +.+.-+... |.++-+.+....       .+   ...+...++ ++||.+.+.     .+.+|+.+.. 
T Consensus       364 l~~~l~~l~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~l~~~Ppl~  436 (460)
T PRK06916        364 VATQLEDLFALKHVGDIRQL-GLMVGIELVKNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPL-----GNTIVFMPPLA  436 (460)
T ss_pred             HHHHHHHhhcCCCeEEeecC-CceeeEEeecccccccCCCchhhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCcc
Confidence            76666654   322223333 444444443210       01   235666665 899999773     3689999776 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Q 015768          367 LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++|+++++++|.++++++.+
T Consensus       437 it~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06916        437 STIDELDEMLRILYKAISDVTE  458 (460)
T ss_pred             cCHHHHHHHHHHHHHHHHhhcc
Confidence            8999999999999999988654

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.89  E-value=4.9e-21  Score=178.25  Aligned_cols=314  Identities=15%  Similarity=0.122  Sum_probs=205.0

Q ss_pred             CCcHHHHHHHHHhhcCC---CCCCCCCCC---CcHHHHHHHHHHHHhhcCC-CCCcEEEeCC-hHHHHHHHHHHhcC---
Q 015768           43 QPPKMAMEKVKELVWDP---SISKYGADE---GLPELRDALVKKLNQENKL-YKSSVMVTAG-ANQAFVNIVLTLCD---  111 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~---~~~~y~~~~---g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g-~t~a~~~~~~~l~~---  111 (400)
                      ..|++|++++.+.+.+.   ..+.|....   ...++.+.+.+.+++.++. +++++++++| +|++++.++.++..   
T Consensus         9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~   88 (355)
T cd00611           9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKG   88 (355)
T ss_pred             CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            46899999999987432   122333231   2225555666666666687 4678999988 99999999999987   


Q ss_pred             CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCC-HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       112 ~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      +||.|++ .+....+.+.++..|+++..+ +.++++...+ .+..+..++++  .++|.+++.+|.||...+        
T Consensus        89 ~~~~i~~-g~~~~~~~~~a~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--~~lV~~~h~~t~tG~~~~--------  156 (355)
T cd00611          89 TADYVVT-GAWSAKAAKEAKRYGGVVVIV-AAKEEGKYTKIPDVETWDLAPD--AAYVHYCSNETIHGVEFD--------  156 (355)
T ss_pred             eEEEEEC-CHHHHHHHHHHHhcCCCcEEE-ecccccCCCCCCCHhhcCCCCC--CCEEEEeCCcccccEEcc--------
Confidence            4555544 222233345678889988888 6654431113 22232334444  499999999999999754        


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------  261 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~---------  261 (400)
                      ++++.||+++++|.+++.+   ..+......+  +.+.|.+|.+|.+|  +|.++.+   +++.+++....         
T Consensus       157 ~i~~~~g~~~~VDa~qs~g---~~~idv~~~~--~~~ss~~K~lGP~G--~g~l~~~---~~~~~~~~~~~~~~~~~~~~  226 (355)
T cd00611         157 EVPDTGGVPLVADMSSNIL---SRPIDVSKFG--VIYAGAQKNLGPAG--VTVVIVR---KDLLGKARKITPSMLNYKTH  226 (355)
T ss_pred             eecccCCCeEEEEcccccc---CCCCCHHHhC--EEEeecccccCCCc--eEEEEEC---HHHHhhcccCCCCcccHHHH
Confidence            2334599999999999843   3333333333  45667899998555  6888888   56665543210         


Q ss_pred             ---ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCc-c-cCC--CCceEEEeeCCCCCCC
Q 015768          262 ---DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGA-V-KGG--EGAIYLWARLPEKHLD  332 (400)
Q Consensus       262 ---~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~  332 (400)
                         ....+++|....+++.++++.-.+  ..+.+.++.+++.+++++.|++++++. . ..+  .++..+.+.++... .
T Consensus       227 ~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~-l  305 (355)
T cd00611         227 ADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEE-L  305 (355)
T ss_pred             HhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChh-h
Confidence               112356777788887777775222  367888999999999999999985432 1 111  22244556665421 1


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      ..++...+ .+.|+.+.++..  ..+.+|+|+.. +|.+|++.+++.|+++
T Consensus       306 ~~~~~~~~-~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         306 EKEFLKEA-EAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             hHHHHHHH-HHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            23443444 478998655543  34789999988 9999999999988874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK07481 hypothetical protein; Provisional

Probab=99.89  E-value=3.6e-20  Score=176.79  Aligned_cols=345  Identities=14%  Similarity=0.108  Sum_probs=219.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+...... ......+.+.++++.|.+..+. ..+.++|++++++|+
T Consensus        39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAv  117 (449)
T PRK07481         39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST-FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSV  117 (449)
T ss_pred             CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec-ccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHH
Confidence            5678899998764  4454 689999999999876432111 0011234556677777665431 236899999999999


Q ss_pred             HHHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCC---CCC-CCHHH---
Q 015768          103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK---TLH-PDADW---  154 (400)
Q Consensus       103 ~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~---~~~-~~~e~---  154 (400)
                      +.+++....       +| .+|+....+|++..........             .+..+ +.+..   .++ .|.+.   
T Consensus       118 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~d~~~~~~  196 (449)
T PRK07481        118 ETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHV-ETPWLYRNPFTEQDPEELAR  196 (449)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEe-CCCcccccccCCCCHHHHHH
Confidence            999997642       23 6799999999996643222110             11112 11100   011 13333   


Q ss_pred             -----HHHhhc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          155 -----LEKTLE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       155 -----l~~~l~--~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                           +++.+.  ....+.+|+++..+...|. .++.++++++.++|++||+++|.||++.+|...+........+...-
T Consensus       197 ~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD  276 (449)
T PRK07481        197 ICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPD  276 (449)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCC
Confidence                 344443  2234688888876766777 46888999999999999999999999998754442211111111111


Q ss_pred             EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      +-+++|.++ .| +++|.++.+   +++.+.+..       .....+++.++++..++.+.|+..++  .+..++.++..
T Consensus       277 iv~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g  350 (449)
T PRK07481        277 IMCLAKGIT-SGYVPLGATMVN---ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR--EDLPANAAKRG  350 (449)
T ss_pred             EEEEeeccc-CCCcCceEEEEc---HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHH
Confidence            335589997 67 589999998   677777653       13456788899999999888875221  23445555556


Q ss_pred             HHHHHHhcc----CCCCcccCCCCceEEEeeCCCCC-----CC-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe
Q 015768          299 EIIREALSP----LGEGAVKGGEGAIYLWARLPEKH-----LD-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF  364 (400)
Q Consensus       299 ~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~  364 (400)
                      +++.+.|++    ++.+.-+... |.++.+.+....     .+     ...+...++ ++||++.+.     .+.+||++
T Consensus       351 ~~l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~-----g~~i~l~P  423 (449)
T PRK07481        351 AYLLEGLQPLKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVAR-ENGVLVRPS-----GTKIILSP  423 (449)
T ss_pred             HHHHHHHHHHhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHHH-hCCeEEEec-----CCEEEEEC
Confidence            666665554    3332233344 555555553210     01     234555554 799999774     24689997


Q ss_pred             cc-CCHHHHHHHHHHHHHHHHHH
Q 015768          365 GG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       365 ~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .. +|++|+++++++|.++++++
T Consensus       424 pl~it~~eid~~~~~l~~~l~~~  446 (449)
T PRK07481        424 PLVIQREDVDRIVDALDAGLSAV  446 (449)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhc
Confidence            76 79999999999999999865

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.89  E-value=3.5e-20  Score=177.04  Aligned_cols=345  Identities=13%  Similarity=0.091  Sum_probs=220.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-----CCCcEEEeCCh
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-----YKSSVMVTAGA   98 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-----~~~~i~~~~g~   98 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.... . ...-..+.+..+++.+.+....     ..+.+++++++
T Consensus        61 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~-~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sG  138 (472)
T PRK08742         61 HDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQV-M-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNG  138 (472)
T ss_pred             CCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCc-c-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCc
Confidence            5678899998875  4443 6899999999988642111 0 0011123456677777655421     23689999999


Q ss_pred             HHHHHHHHHHhcC-------C-CCEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCCC-----CC----
Q 015768           99 NQAFVNIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-----TL----  148 (400)
Q Consensus        99 t~a~~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-----~~----  148 (400)
                      ++|++.+++....       + ..+|+....+|++........ |.            .+..+ |....     +.    
T Consensus       139 SEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~-~~p~~~~~~~~~~~~~  217 (472)
T PRK08742        139 SAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFA-PSPDAYLAEPGQSAED  217 (472)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEe-CCCCccccccCCCHHH
Confidence            9999999998642       2 268999999998876433222 11            11222 22110     00    


Q ss_pred             --CCCHHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          149 --HPDADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       149 --~~~~e~l~~~l~-~~~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                        ..+++.+++.+. ....+.+|+++. .+...|. ..|.++++++.++|++||+++|.||++.+|...|..+.....+.
T Consensus       218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv  297 (472)
T PRK08742        218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV  297 (472)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC
Confidence              002466667664 223467888875 3666776 57889999999999999999999999998765443222211222


Q ss_pred             EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  296 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  296 (400)
                      ..-+-+++|.+| +| +++|.++.+   +++.+.+..      .....+++.++++..++.+.|+..++  ++..++.++
T Consensus       298 ~PDiv~~gKgl~-gG~~Plaav~~~---~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~  371 (472)
T PRK08742        298 MPDLLCLSKGLT-GGFLPLSAVLAT---QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD--DDVIARNQP  371 (472)
T ss_pred             CCCEEEEccccc-CCCCCcceeecc---HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH--CCHHHHHHH
Confidence            222335589997 78 489999998   677776642      12456788899999999988875221  122333333


Q ss_pred             HHHHHHH---HhccCCCCcccCCCCceEEEeeCCCCCC-----C-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEE
Q 015768          297 NREIIRE---ALSPLGEGAVKGGEGAIYLWARLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRIS  363 (400)
Q Consensus       297 ~~~~l~~---~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~  363 (400)
                      ..+++.+   .+++++.+.-+... |+++-+.+.....     +     ...+...++ ++||++.+.     .+.+||.
T Consensus       372 ~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~vi~~~  444 (472)
T PRK08742        372 TAARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAAL-ARGVVLRPL-----GDVLYWM  444 (472)
T ss_pred             HHHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEE
Confidence            3333333   34445443334444 5666665532110     1     134555554 799999763     3689999


Q ss_pred             ecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          364 FGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       364 ~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +.. .+++++++++++|.+++.++.
T Consensus       445 PpL~it~~ei~~~~~~l~~~l~~~~  469 (472)
T PRK08742        445 PPYCVDEAQLALLADTTRHAIDEAV  469 (472)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            887 899999999999999998764

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.89  E-value=4.4e-20  Score=175.18  Aligned_cols=340  Identities=14%  Similarity=0.091  Sum_probs=219.0

Q ss_pred             hcCCCeEEcCCCC--CCC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~-~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..+ ..+|++++++.+.+.+.........  .......+++.+.+..+-.-+.+++++++++|++
T Consensus        42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e  119 (427)
T TIGR00508        42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGF--THKPAIELCQKLVKMTPNALDCVFLADSGSVAVE  119 (427)
T ss_pred             CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccc--CCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHH
Confidence            4578899998875  344 3789999999998876431111111  1123345666665554323478999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCcE-------------EEEeccCCCCCC-----CCCHHHHH
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGVT-------------HILVGPCSSKTL-----HPDADWLE  156 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~-----~~~~e~l~  156 (400)
                      .+++....       +| .+|+....+|++....+-. .+..             ...+ |.....+     .-++++++
T Consensus       120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~l~  198 (427)
T TIGR00508       120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFA-PAPQNRFDEEWNEEAITPLA  198 (427)
T ss_pred             HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEc-CCCCccccchhHHHHHHHHH
Confidence            99987541       23 6899999999886543322 1211             0111 1110101     01456777


Q ss_pred             Hhhcc-CCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccc
Q 015768          157 KTLET-KPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~~-~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~s  231 (400)
                      +.+.. ...+++|+++.. +...|. .++.+++++|.++|++||+++|+||++.++...+..+...  .-..+++  +++
T Consensus       199 ~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~--~~g  276 (427)
T TIGR00508       199 KLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDIL--CVG  276 (427)
T ss_pred             HHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEE--Eec
Confidence            77752 223567777753 666666 5688999999999999999999999997664444321111  1122344  379


Q ss_pred             cccCCCcc-eeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          232 KAYGMMGW-RVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       232 K~~g~~g~-~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      |.++ +|+ .++.++.+   +++.+.+...     ....++..++++..++.++|+.-.+  ....++.+++.++|++.|
T Consensus       277 K~l~-gG~~p~~a~~~~---~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L  350 (427)
T TIGR00508       277 KALT-GGYMTLSATVTT---DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE--GEWQKQVSAIENQLKREL  350 (427)
T ss_pred             hhhh-cCcccceEEEEc---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence            9996 774 78888888   6787777642     1345667789999998888874111  133456666777777777


Q ss_pred             ccCCCCc---ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          306 SPLGEGA---VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       306 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      +++....   -.... +.++.+.+... .....+..+++ ++||.+.+.     .+.+|+++.. ++++|+++++++|.+
T Consensus       351 ~~l~~~~~i~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gv~~~~~-----~~~l~~~ppl~~t~~~id~~~~~l~~  422 (427)
T TIGR00508       351 SPLRKNPVVKDVRVL-GAIGVVEMYKP-VNVEELQKKFV-EQGVWIRPF-----GKLIYVMPPYIITTEQLQKLTAALIE  422 (427)
T ss_pred             HHhhcCCCEEeEecc-ccEEEEEECCc-cCHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            6654311   11122 45555555432 23567777775 789999763     2479999886 799999999999999


Q ss_pred             HHHH
Q 015768          382 GLEE  385 (400)
Q Consensus       382 ~l~~  385 (400)
                      ++++
T Consensus       423 ~l~~  426 (427)
T TIGR00508       423 ALHE  426 (427)
T ss_pred             HHhc
Confidence            9864

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.88  E-value=4.9e-20  Score=174.32  Aligned_cols=338  Identities=12%  Similarity=0.065  Sum_probs=214.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++|+..+.  ..++ .+|++.+++.+.+.+...  +..   ..+.+.++++.+.+..+...+.++|++++++|++
T Consensus        50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~---~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e  124 (433)
T PRK00615         50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTS--YGL---TSEQEILFAEELFSYLGLEDHKIRFVSSGTEATM  124 (433)
T ss_pred             CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCC--CCC---CCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence            5578899998875  4454 789999999999886432  211   1234556666666655433468999999999999


Q ss_pred             HHHHHhcC--CCCEEEEeCCCccchhHH----HHhcCcE---E-EEe--ccCCCC----CCCCCHHHHHHhhcc-CCCCe
Q 015768          104 NIVLTLCD--AGDSVVMFAPYYFNSYMS----FQMTGVT---H-ILV--GPCSSK----TLHPDADWLEKTLET-KPTPK  166 (400)
Q Consensus       104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~----~~~~g~~---~-~~~--~~~~~~----~~~~~~e~l~~~l~~-~~~~~  166 (400)
                      .+++....  ...+|+....+|+++.+.    +...+-.   . ...  .+....    .+ -|++.+++.+.. ...+.
T Consensus       125 ~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~a  203 (433)
T PRK00615        125 TAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGHRVA  203 (433)
T ss_pred             HHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCCceE
Confidence            99998752  236899999999997522    1111100   0 000  000000    11 267888888863 23357


Q ss_pred             EEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcceeEE
Q 015768          167 LVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGY  243 (400)
Q Consensus       167 ~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~  243 (400)
                      +|+++......|.. .+.+++++|.++|++||+++|+||++.++. .+......  .-..+++  +++|.+| .|+++|+
T Consensus       204 avI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~ga~~~~gv~PDi~--~~gK~lg-gG~p~~a  279 (433)
T PRK00615        204 GVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQGGAAAIYHVKPDIT--VYGKILG-GGLPAAA  279 (433)
T ss_pred             EEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHhHHHHhcCCCCCeE--EEccccc-CCcceee
Confidence            77777666667775 467899999999999999999999997662 22211111  1122343  5799997 6788999


Q ss_pred             EEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh----ccCCC-CcccC
Q 015768          244 IAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGE-GAVKG  315 (400)
Q Consensus       244 i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~-~~~~~  315 (400)
                      ++++   +++.+.+...   ....+++.+++...++.+.|+.-++  ....++++++.+++.+.|    ++.+. +...+
T Consensus       280 v~~~---~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~--~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r  354 (433)
T PRK00615        280 VVAH---KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE--QGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR  354 (433)
T ss_pred             eeec---HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Confidence            9998   7888777432   2335677888998888888875221  123445555555554444    44332 23333


Q ss_pred             CCCceEEEeeCCCCCC---------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~---------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                       . +.++.+.+.....         +   ...+..++. ++||++.+....   .+ =++.. ++++|++++++++.+++
T Consensus       355 -~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~---~~-~ls~~-ht~~did~~~~a~~~~~  426 (433)
T PRK00615        355 -Y-GSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAF-SKGVYLSPSPFE---AS-FLSSA-HSMENLDYAQNVLIDSL  426 (433)
T ss_pred             -e-ceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHH-HCCeeecCcccc---cc-ceecC-CCHHHHHHHHHHHHHHH
Confidence             3 5555555532210         1   225666665 789999875421   11 24555 49999999999999999


Q ss_pred             HHHh
Q 015768          384 EELV  387 (400)
Q Consensus       384 ~~~~  387 (400)
                      ++..
T Consensus       427 ~~~~  430 (433)
T PRK00615        427 EKVF  430 (433)
T ss_pred             HHHh
Confidence            8864

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.88  E-value=3.6e-20  Score=173.60  Aligned_cols=304  Identities=16%  Similarity=0.108  Sum_probs=206.8

Q ss_pred             cHHHHHHHHHHHHhhcCCCC-CcEEEeCChH-HHHHHHHHHhcC---CCCEEEEeCCCccchhHHHHhcCcEEEEecc--
Q 015768           70 LPELRDALVKKLNQENKLYK-SSVMVTAGAN-QAFVNIVLTLCD---AGDSVVMFAPYYFNSYMSFQMTGVTHILVGP--  142 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t-~a~~~~~~~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~--  142 (400)
                      ...+.+.+.+.+.+..|++. ...++++++| .++..++.++..   +||.|+++..+|.++..++...|++++.+ +  
T Consensus       103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~V-d~~  181 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVI-ETV  181 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEe-eee
Confidence            45677778888888888763 4588899998 688888888763   58999999999999999999999999999 6  


Q ss_pred             CCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCC-CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cc
Q 015768          143 CSSKTLHPDADWLEKTLETKP-TPKLVSVVNPG-NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CC  218 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~-nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~  218 (400)
                      .+++.+.+|++.+++++++.+ ...++++.+|+ +++|...+   +++|.++|++||+++|+|++|+.....-...  ..
T Consensus       182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd---L~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g  258 (444)
T TIGR03531       182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD---IEEIAKICANYDIPHIVNNAYGLQSNKYMELINKA  258 (444)
T ss_pred             ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC---HHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcc
Confidence            467778999999999998532 23555555554 33444555   9999999999999999999999533211101  11


Q ss_pred             cCC-CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 015768          219 VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN  297 (400)
Q Consensus       219 ~~~-~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  297 (400)
                      ... ..++++.|++|++.+++. .|.++.++  +++.+.+......  ...+.+.+.+...++..+.++++++.++..++
T Consensus       259 ~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d--~el~~~i~~~y~g--~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~  333 (444)
T TIGR03531       259 IKVGRVDAVVSSTDKNFMVPVG-GAIIYSFD--ENFIQEISKSYPG--RASASPSLDVLITLLSLGSKGYLELLKERKEM  333 (444)
T ss_pred             ccccCCCeEEEeCccCCCCCCC-EEEEEECC--HHHHHHHHHhccC--CCCChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            111 246888899999976654 45555655  7888887764322  22445677777778877788889999999999


Q ss_pred             HHHHHHHhccCCC---CcccCC-CCceEEEeeCCCC-CCCHHHHHHHHHHhcCeE----EeCCC-------cc---CC--
Q 015768          298 REIIREALSPLGE---GAVKGG-EGAIYLWARLPEK-HLDDFEVVRWLAHRHGVV----VIPGG-------AC---GC--  356 (400)
Q Consensus       298 ~~~l~~~L~~~~~---~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~----v~~g~-------~~---~~--  356 (400)
                      ++++.+.|+++..   .++... ....-+.+.+... ..+...+-..|. .++|.    |.+|.       .|   +.  
T Consensus       334 a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~-~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~  412 (444)
T TIGR03531       334 YKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLY-SRRVTGPRVVTNGDSKTVGGCEFKGYGSHT  412 (444)
T ss_pred             HHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHH-hCCCCCceeecCCCceEECCEEeecccccc
Confidence            9999998887531   133322 2122222222211 124555555554 56652    34554       22   11  


Q ss_pred             ----CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          357 ----RGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       357 ----~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                          ..++=++.+. ++.+|++..+++|.+++
T Consensus       413 ~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~  444 (444)
T TIGR03531       413 SNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL  444 (444)
T ss_pred             cCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence                1244444333 69999999999998763

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.88  E-value=1.2e-19  Score=172.57  Aligned_cols=334  Identities=13%  Similarity=0.122  Sum_probs=215.8

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....+     ..+...++++.+.+... ..+.++|++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e  123 (428)
T PRK12389         50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT-----PTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVM  123 (428)
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCC-----CCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHH
Confidence            5578899998775  3344 689999999999886432222     12344566666655443 2478999999999999


Q ss_pred             HHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCcEEE--------Eecc-CCCCC---CCCCHHHHHHhhcc-CCCCeE
Q 015768          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGVTHI--------LVGP-CSSKT---LHPDADWLEKTLET-KPTPKL  167 (400)
Q Consensus       104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~~~~--------~~~~-~~~~~---~~~~~e~l~~~l~~-~~~~~~  167 (400)
                      .+++....  ...+|+....+|++....... .|....        .+.+ ..++-   ...|++.+++.+.. ...+.+
T Consensus       124 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaa  203 (428)
T PRK12389        124 TTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAA  203 (428)
T ss_pred             HHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEE
Confidence            99997652  346899999999997644322 221110        0000 00000   01268888888862 233677


Q ss_pred             EEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC----ccccCCCcEEEEeccccccCCCcceeE
Q 015768          168 VSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK----HCCVEGDHVVNLFSFSKAYGMMGWRVG  242 (400)
Q Consensus       168 v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~g~~g~~~G  242 (400)
                      |+++..+...|.+ .+.+++++|.++|++||+++|+||++.+|.. +..    +....+|  +  .+++|.+| .|+++|
T Consensus       204 vi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~~~a~~~~gv~PD--i--vt~gK~lg-gG~Pi~  277 (428)
T PRK12389        204 VLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF-MYGGAQDLLGVEPD--L--TALGKIIG-GGLPIG  277 (428)
T ss_pred             EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-CcchhhHHhCCCCC--e--eeechhhc-CCCcee
Confidence            8877667777865 5788999999999999999999999997732 211    1122222  3  47789997 789999


Q ss_pred             EEEccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCC-ccc
Q 015768          243 YIAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEG-AVK  314 (400)
Q Consensus       243 ~i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~  314 (400)
                      .++++   +++.+.+..   .....+++.|++...++.+.|+.-++  +...++.+++.+++++.|++    ++.+ .+.
T Consensus       278 av~~~---~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~  352 (428)
T PRK12389        278 AYGGR---KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ--EGVYEKLDRLGAMLEEGILEAAEKHGITITIN  352 (428)
T ss_pred             EEeEH---HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            99888   788777642   22345778899999999888875221  23445566666666666654    4432 232


Q ss_pred             CCCCceEEEeeCCCC-C--------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~-~--------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +.. +++ -+.+... .        .+   ...+...+. ++||++.+..    .+.+.+++. ++++|++++++++.++
T Consensus       353 r~~-g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~l~-~t~e~id~~~~~l~~~  424 (428)
T PRK12389        353 RLK-GAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINLAPSK----YEAWFLTTA-HTEEDIEETLEAVDRA  424 (428)
T ss_pred             ecC-cEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEeecCC----CCCeeecCC-CCHHHHHHHHHHHHHH
Confidence            333 333 2332111 0        01   234555554 7999998742    223455554 5999999999999999


Q ss_pred             HHH
Q 015768          383 LEE  385 (400)
Q Consensus       383 l~~  385 (400)
                      +++
T Consensus       425 l~~  427 (428)
T PRK12389        425 FAQ  427 (428)
T ss_pred             HHh
Confidence            875

>PRK07036 hypothetical protein; Provisional

Probab=99.88  E-value=1.5e-19  Score=172.96  Aligned_cols=346  Identities=12%  Similarity=0.091  Sum_probs=220.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSI-SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+... ..+.  ....+.+..+++.+.+.....-+.++|++++++|+
T Consensus        48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAv  125 (466)
T PRK07036         48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAV  125 (466)
T ss_pred             CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHH
Confidence            5678899998775  4443 689999999998876321 1111  01234556677777665432346899999999999


Q ss_pred             HHHHHHhc------C-C-CCEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCC--C-CCCCC-------
Q 015768          103 VNIVLTLC------D-A-GDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS--K-TLHPD-------  151 (400)
Q Consensus       103 ~~~~~~l~------~-~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~--~-~~~~~-------  151 (400)
                      +.+++...      . + ..+|+....+|++........ |.            .+..+ |...  . ....+       
T Consensus       126 e~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~  204 (466)
T PRK07036        126 DSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHL-SSPNPYRRPAGMSEAAFCDF  204 (466)
T ss_pred             HHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEe-cCCcccccccCCChHHHHHH
Confidence            99999763      1 2 268999999998876433221 11            12222 2111  0 00111       


Q ss_pred             -HHHHHHhhc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CCCcEEE
Q 015768          152 -ADWLEKTLE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EGDHVVN  226 (400)
Q Consensus       152 -~e~l~~~l~--~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~i~  226 (400)
                       ++.+++.+.  ....+.+|+++..+...|. .++.+++++|.++|++||+++|+||++.+|...|...... ..+...-
T Consensus       205 ~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD  284 (466)
T PRK07036        205 LVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD  284 (466)
T ss_pred             HHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC
Confidence             234555553  2234688888876766777 4688899999999999999999999998775433211111 1111111


Q ss_pred             EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      +.+++|.+| .| +++|.++.+   +++.+.+..       +....+++.++++..++.+.|+.-++  .+..++.+++.
T Consensus       285 ivt~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~--~~l~~~~~~~g  358 (466)
T PRK07036        285 IITFAKGLT-SGYQPLGAVIIS---ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER--EGLCEHVREVG  358 (466)
T ss_pred             EEEEccccc-cCccccEEEEEc---HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence            336689997 77 589999998   788777653       23345788899999999998875221  23445555555


Q ss_pred             HHHHHHhcc---CCCCcccCCCCceEEEeeCCCCC-------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec
Q 015768          299 EIIREALSP---LGEGAVKGGEGAIYLWARLPEKH-------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG  365 (400)
Q Consensus       299 ~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~  365 (400)
                      ++|++.|+.   ++.+.-+... |.++.+.+....       .+   ...+...++ ++||.+.+.     .+.+|+++.
T Consensus       359 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~-----~~~~~l~Pp  431 (466)
T PRK07036        359 PYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQ-ERGLLVRPL-----EHLCVLSPP  431 (466)
T ss_pred             HHHHHHHHHhccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHH-HCCcEEeec-----CCEEEEeCC
Confidence            666555544   3332223334 556666653211       01   234555554 899999763     257899977


Q ss_pred             c-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          366 G-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       366 ~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      . +|++|+++++++|.++++++.+
T Consensus       432 l~it~~~id~~~~~l~~al~~~~~  455 (466)
T PRK07036        432 LIITRAQIDEIVAILRAAIEETAD  455 (466)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHH
Confidence            6 7999999999999999988743

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.88  E-value=4.7e-20  Score=171.37  Aligned_cols=280  Identities=17%  Similarity=0.171  Sum_probs=186.8

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCC-C
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSS-K  146 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~-~  146 (400)
                      ...+++++.+++..|.  +..+.+++++.|+..++.++.++||+|+++.+.|.+..    ..+...|++++++ +.++ +
T Consensus        64 P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv-d~~~~~  140 (384)
T PRK06434         64 PTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI-DTDRLN  140 (384)
T ss_pred             hhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEE-CCCChh
Confidence            3344444444444453  56788899999999999999999999999988776655    5567789999999 6653 2


Q ss_pred             CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                      .+.         +++. .+++|++..|+||++.+.|   +++|.++|++++  +++|.+++.... +   .....+.+++
T Consensus       141 ~~~---------l~~~-~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~~-~---~pl~~gaDiv  201 (384)
T PRK06434        141 SLD---------FDPS-NYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPYN-Q---NPLDLGADVV  201 (384)
T ss_pred             hee---------ecCC-CeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCccc-C---CchhcCCCEE
Confidence            221         2221 2499999999999999999   999999999998  467999753211 1   1234567899


Q ss_pred             EeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      +.|.+|.++.+| .-.|.+++++  +++.+++...+.......+++..+.+...|+.    +..++++.++++..+.+.|
T Consensus       202 v~S~tK~i~G~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t----L~~R~~r~~~~a~~~a~~L  275 (384)
T PRK06434        202 IHSATKYISGHSDVVMGVAGTNN--KSIFNNLVERRKTLGSNPDPIQAYLALRGLKT----LGLRMEKHNKNGMELARFL  275 (384)
T ss_pred             EeecccccCCCCCceEEEEecCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc----HHHHHHHHHHHHHHHHHHH
Confidence            999999996433 4568787765  67777777655444555566655555555554    6788889999999999999


Q ss_pred             ccCCCCc-ccCCC----------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------------------
Q 015768          306 SPLGEGA-VKGGE----------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------------------  354 (400)
Q Consensus       306 ~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------------------  354 (400)
                      ++++.+. +..|.          .+-.+.+.+.. .....++.+.| +=..+.+.-|...                    
T Consensus       276 ~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~  353 (384)
T PRK06434        276 RDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-MEDVHKFIRNL-EIPMVAASLGGVESLITLPVETSHSSLSPEERE  353 (384)
T ss_pred             HcCCCccEEECCChHHHHHhcCCCCceEEEEECC-HHHHHHHHHhC-CcceEccCCCCCCeeeECCCccccccCCHHHHH
Confidence            9988642 33221          24455566652 11222333322 1111222222211                    


Q ss_pred             --C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          355 --G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       355 --~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                        + .++.+|||++.   |+.+++++.|.+||.
T Consensus       354 ~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~  383 (384)
T PRK06434        354 RLGISDNLVRFSIGI---EDIDDLIKDIENALS  383 (384)
T ss_pred             hcCCCcCeEEEEeCc---CCHHHHHHHHHHHhc
Confidence              0 13579999997   667788888888875

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.88  E-value=9.6e-20  Score=173.99  Aligned_cols=348  Identities=15%  Similarity=0.159  Sum_probs=217.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-C-CcE-EEeCChHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K-SSV-MVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~-~~i-~~~~g~t~  100 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....  ...-..+.+.++++.+.+..... . ..+ ++++++++
T Consensus        55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~--~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE  132 (459)
T PRK06931         55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLH--TLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD  132 (459)
T ss_pred             CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccc--ccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence            5578899998875  4444 78999999999887532111  11112456667777776654311 1 134 55589999


Q ss_pred             HHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C------------cEEEEeccCCCC-C--CC----CCHHHH---
Q 015768          101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G------------VTHILVGPCSSK-T--LH----PDADWL---  155 (400)
Q Consensus       101 a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~-~--~~----~~~e~l---  155 (400)
                      |++.+++...  ....+|+....+|++........ +            ..+..+ |..+. .  +.    -+.+.+   
T Consensus       133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  211 (459)
T PRK06931        133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFM-PYPHEYRCPLGIGGEAGVKALTYY  211 (459)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence            9999999764  23468999999999987544321 1            012222 22110 0  00    012222   


Q ss_pred             -HHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768          156 -EKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS  229 (400)
Q Consensus       156 -~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s  229 (400)
                       ++.+.    ....+.+|+++..+...|. ..+.++++++.++|++||+++|.||++.+|...|........+...-+-+
T Consensus       212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt  291 (459)
T PRK06931        212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV  291 (459)
T ss_pred             HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE
Confidence             33332    1123678888766666676 46789999999999999999999999998754443221111121122345


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc---
Q 015768          230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS---  306 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~---  306 (400)
                      ++|.+| .|+++|.++.+   +++ +.+.......+++.|+++..++.+.|+.-++  ....++.++..++|.+.|+   
T Consensus       292 ~gK~l~-gG~Pi~av~~~---~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~--~~l~~~~~~~G~~l~~~L~~l~  364 (459)
T PRK06931        292 MSKAVG-GGLPLAVLGIK---KEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKE--ENLAQNAAERGEWLKAQLAELQ  364 (459)
T ss_pred             eccccc-CCcceeeeeeH---HHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHH
Confidence            689997 78999998877   443 5444344567888999999999988874221  1233444444455554444   


Q ss_pred             -cCCCCcccCCCCceEEEeeCCCCC----------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH
Q 015768          307 -PLGEGAVKGGEGAIYLWARLPEKH----------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  371 (400)
Q Consensus       307 -~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  371 (400)
                       +++.+.-+... |.++-+.+....          .+   ...+...++ ++|+.+.++..  .++.+|+.++. +++++
T Consensus       365 ~~~~~i~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~--~~~~l~~~Ppl~it~~e  440 (459)
T PRK06931        365 KRYPCIGNVRGR-GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGGR--NGNVVRLLPPLLITQAE  440 (459)
T ss_pred             HhCCCeEeEecC-ceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCcCHHH
Confidence             34543334444 555555553210          01   234555554 79999976432  25789999887 89999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 015768          372 CKAAADRLRRGLEELVK  388 (400)
Q Consensus       372 ~~~~~~~l~~~l~~~~~  388 (400)
                      +++++++|.+++.++.+
T Consensus       441 id~~~~~l~~~l~~~~~  457 (459)
T PRK06931        441 CEEFIDRFEQALLAAVK  457 (459)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999988765

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.88  E-value=6.3e-20  Score=165.32  Aligned_cols=286  Identities=20%  Similarity=0.156  Sum_probs=203.1

Q ss_pred             HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCCCC
Q 015768           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSK  146 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~  146 (400)
                      .+.+..+...+++..|.  .+.+++++|+.|+..++..|+.+|++|+.+..+|.+....++    ..|++...+ ..+  
T Consensus        76 nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~v-d~~--  150 (409)
T KOG0053|consen   76 NPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFV-DVD--  150 (409)
T ss_pred             CCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeee-chh--
Confidence            44555556666555553  458889999999999999999999999999999999887664    456676666 222  


Q ss_pred             CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                          +++.+++.+.+++  ++|+++.|.||+..+.|   |++|+++|+++|+++++|++++...+    ......+.+|+
T Consensus       151 ----~~~~~~~~i~~~t--~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~----~~pL~lGADIV  217 (409)
T KOG0053|consen  151 ----DLKKILKAIKENT--KAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYN----QDPLPLGADIV  217 (409)
T ss_pred             ----hHHHHHHhhccCc--eEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccc----cChhhcCCCEE
Confidence                5677888887765  99999999999999999   99999999999999999999885422    22344568899


Q ss_pred             EeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          227 LFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       227 ~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      +.|.+|.+|. ..+-.|.++.+.  +++.+++...+....+++++...+.+.+.++.    +--++++..+++..+++.|
T Consensus       218 ~hSaTKyi~Ghsdvi~G~iv~n~--~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt----l~lRi~~~~ena~~~A~~L  291 (409)
T KOG0053|consen  218 VHSATKYIGGHSDVIGGSVVLNS--EELASRLKFLQEDLGWCEDPFDLFLLSRGLKT----LHLRINKHSENALKIALLL  291 (409)
T ss_pred             EEeeeeeecCCcceeeeEEecCc--HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch----hhhhHHHHHHHHHHHHHHh
Confidence            9999999963 446678888865  89999999888877888888887776666654    4455667777777777888


Q ss_pred             ccCCCCc-ccCC------------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----------
Q 015768          306 SPLGEGA-VKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------  355 (400)
Q Consensus       306 ~~~~~~~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------  355 (400)
                      +..+.++ ++.|                  -|+.+..+....  .+..+++..|. =.-....-|..+.           
T Consensus       292 e~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~--~~a~kf~~~LK-~~~~a~SlG~~eSL~~~p~~mth~  368 (409)
T KOG0053|consen  292 EAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNE--EHAKKFYDALK-LFTKAPSLGGNESLAEPPAIMTHA  368 (409)
T ss_pred             hhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCH--HHHHHHHHhhh-hhhcccCcCccchhhcchhhhccC
Confidence            7765532 2211                  122222222221  13444544431 1112233333321           


Q ss_pred             -----------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 -----------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 -----------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                 .++-+|+|++.   |+++.+++.|.+|++..
T Consensus       369 ~~~e~~~~~Gi~~~LVRvSVGi---Ed~~dL~~d~~~Al~~~  407 (409)
T KOG0053|consen  369 SELEEREKFGIDPNLVRVSVGI---EDIEDLIKDFQQALEKA  407 (409)
T ss_pred             CCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                       25689999996   77888888888888764

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.87  E-value=4.1e-20  Score=156.30  Aligned_cols=331  Identities=16%  Similarity=0.107  Sum_probs=228.0

Q ss_pred             CCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        30 ~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      +.+++|+.++ ..+..+|+++++-.+++++...+.-+  -.-|...+.+.+...+++.++  .++.++.+++-.|+..++
T Consensus        67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~f  144 (417)
T KOG1359|consen   67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAF  144 (417)
T ss_pred             cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHH
Confidence            6788998876 66778999999999998874322111  124566677777777776666  577888888889999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      .++..|.|.|+-.+..|.+..+.++.+.    .+      + ++|+-.++..+.+  +.+.|+|+-...-...|.+.|  
T Consensus       145 eail~pedAvfSDeLNhASIIdGirLck----ry------~-h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP--  211 (417)
T KOG1359|consen  145 EAILTPEDAVFSDELNHASIIDGIRLCK----RY------R-HVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP--  211 (417)
T ss_pred             HHhcChhhhhhccccccchhhhhhHHHh----hh------c-cchhHHHHHHHHHhhhheEEEEEecceeccCCCccc--
Confidence            9999999999999999988888776544    11      1 3456566665542  222466665566678999999  


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCc-----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                       +++|.+++++||.++++||+|+.+.++...-     .....+.+++.++++|++|  |.-.||..++   +.++.-++.
T Consensus       212 -l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp---~~li~llrq  285 (417)
T KOG1359|consen  212 -LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGP---KPLISLLRQ  285 (417)
T ss_pred             -HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCC---hhHHHHHHh
Confidence             8899999999999999999999777654321     1223677899999999996  4445999999   788887776


Q ss_pred             hhccCCcC--ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768          260 VQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       260 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      ..+..-|+  .++....++.+++.- .-.-.+.....+.+.+++++..+.-+. .+.+.. .....+-+... .-..++.
T Consensus       286 r~RpylFSnslppavV~~a~ka~dl-lm~s~~~i~~~~a~~qrfr~~me~aGf-tIsg~~-hPI~pv~lGda-~lA~~~a  361 (417)
T KOG1359|consen  286 RSRPYLFSNSLPPAVVGMAAKAYDL-LMVSSKEIQSRQANTQRFREFMEAAGF-TISGAS-HPICPVMLGDA-RLASKMA  361 (417)
T ss_pred             cCCceeecCCCChhhhhhhHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCc-eecCCC-CCccceecccH-HHHHHHH
Confidence            55433333  332222233333321 001134455566777888888877665 555432 22233333221 1355778


Q ss_pred             HHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+|+ +.||+|..-+++.   +...||+.++. +++||++++++++.++.+.+
T Consensus       362 d~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~  413 (417)
T KOG1359|consen  362 DELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL  413 (417)
T ss_pred             HHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence            8888 7899997544443   34578998887 89999999999999887654

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.87  E-value=1.1e-18  Score=161.36  Aligned_cols=323  Identities=12%  Similarity=0.083  Sum_probs=220.4

Q ss_pred             HHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCcc
Q 015768           46 KMAMEK-VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF  124 (400)
Q Consensus        46 ~~v~~a-~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~  124 (400)
                      ..+.++ +.+.+...  -.|+.++...++++++++++    |  .+.++.|+++|.|++.+....++|||.|  +.+.|+
T Consensus        50 ~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~va~~~----G--~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f  119 (450)
T TIGR02618        50 NAMSDKQWAGLMMGD--EAYAGSRNFYHLERTVRELY----G--FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYF  119 (450)
T ss_pred             HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHHHHHHH----C--CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeH
Confidence            555555 44443322  24878888899999999988    4  4679999999999998877778999977  667775


Q ss_pred             chhHH-HHhcCcEEEEeccCC---------CCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCC-CccCCCHHHHHHHHH
Q 015768          125 NSYMS-FQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETKP--TPKLVSVVNPGNP-SGTYIPERLLKRISD  191 (400)
Q Consensus       125 ~~~~~-~~~~g~~~~~~~~~~---------~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~np-tG~~~~~~~l~~i~~  191 (400)
                      ..... +...|+.++-+ +.+         +..+++|++.+++.+++..  ..++|.+++++|. .|.++|.++++++.+
T Consensus       120 ~Tt~ahIe~~Gav~vDi-~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~e  198 (450)
T TIGR02618       120 TTTRYHQEKNGATFVDI-IIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRE  198 (450)
T ss_pred             HHHHHHHHhCCeEEEee-ecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHH
Confidence            55544 78888865555 443         3456889999999998532  2357777878775 589999999999999


Q ss_pred             HHHHcCCEEEEcccccccc----------cCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          192 LCKAAGSWLVVDNTYEYFM----------YDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~----------~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      +|++||+.+|.|.++....          +.+.+.    .......+.++.|..|..+++-  .|+++.++  +++++++
T Consensus       199 lA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~--GG~l~~~d--~~l~~k~  274 (450)
T TIGR02618       199 LCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI--GGFLCMND--DEMFQSA  274 (450)
T ss_pred             HHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC--ceEEEeCC--HHHHHHH
Confidence            9999999999999987521          111111    0001234568889999886541  37777676  8999888


Q ss_pred             HHhhccC----CcC-ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC----
Q 015768          258 LKVQDNI----PIC-ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE----  328 (400)
Q Consensus       258 ~~~~~~~----~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~----  328 (400)
                      +......    +++ .+.....+++..|.+..+  ..+.++-..+.++|.+.|.+.|. .+..|.+++.++++...    
T Consensus       275 r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~--~~y~~~r~~~a~~La~~L~~~Gv-pv~~p~ggh~V~vda~~~lph  351 (450)
T TIGR02618       275 KELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD--YEYIEHRVKQVRYLGDKLKAAGV-PIVEPVGGHAVFLDARRFLPH  351 (450)
T ss_pred             HHHhhhcCCccccCchhhhhHHHHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHHCCC-cccCCCCcceEEEEhHHhCCC
Confidence            7764321    222 244455555556664222  23344444567888888888854 66667778888876432    


Q ss_pred             ---CCCCHHHHHHHHHHhcCeEEeC-CCccCC------------CCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768          329 ---KHLDDFEVVRWLAHRHGVVVIP-GGACGC------------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       329 ---~~~~~~~~~~~l~~~~gi~v~~-g~~~~~------------~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~  386 (400)
                         .......++.+|..+.||--.. |+...+            -..+|+++.+  -|.+-++...++|....++-
T Consensus       352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~  427 (450)
T TIGR02618       352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR  427 (450)
T ss_pred             CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence               1234677888888889987543 332211            1479999886  57788888888887777653

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.86  E-value=1.7e-19  Score=167.76  Aligned_cols=315  Identities=12%  Similarity=0.069  Sum_probs=202.1

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEe-CChHHHHHHHHHHhcCCCCEEEEeC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVT-AGANQAFVNIVLTLCDAGDSVVMFA  120 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~-~g~t~a~~~~~~~l~~~gd~vlv~~  120 (400)
                      ..|++|++++......- ...........++.+.+.+.+.+.++++. .+|+|+ +|+|.+++.++.++..+ +.+++..
T Consensus        13 ~~~~~v~~a~~~~~~~~-~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~   90 (361)
T TIGR01366        13 KVRLEQLQALTTTAASL-FGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSF   90 (361)
T ss_pred             CCCHHHHHHHHhcCccc-cccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEec
Confidence            45788988876432111 10011233345566666666666668754 478886 66999999999999743 3444444


Q ss_pred             CCccc-hhHHHHhc--CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          121 PYYFN-SYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       121 p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      ..|.. +.+.++..  +.++..+ +.+. +..++.     .+.++  +++|.+++.+|.||.+.|   +++|   ++++|
T Consensus        91 G~~~~~~~~~a~~~~~~~~~~~~-~~~~-~~~~~~-----~~~~~--~~lV~~~h~et~tG~~~p---i~~I---~~~~g  155 (361)
T TIGR01366        91 GEFSSKFAKAVKLAPWLGEPIIV-TADP-GSAPEP-----QADPG--VDVIAWAHNETSTGVAVP---VRRP---EGSDD  155 (361)
T ss_pred             CHHHHHHHHHHHhhhccCCceEE-ecCC-CCCCCC-----ccCCC--CCEEEEcccCCccceecc---cccc---cccCC
Confidence            45532 33444432  2255555 4432 322222     23344  499999999999999999   5555   47899


Q ss_pred             CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------------
Q 015768          198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------------  261 (400)
Q Consensus       198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----------------  261 (400)
                      +++++|.+++..   ..+....  ..+++++|.+|++|.+| .++.++.+   +++.+++....                
T Consensus       156 ~~~iVDavqs~g---~~~idv~--~~D~~~~s~~K~lg~~~-Gl~~~~~s---~~~~~~~~~~~~~~~~~p~~~d~~~~~  226 (361)
T TIGR01366       156 ALVVIDATSGAG---GLPVDIA--ETDVYYFAPQKNFASDG-GLWLAIMS---PAALERIEAIAASGRWVPEFLSLPTAV  226 (361)
T ss_pred             CeEEEEcCcccc---CCCCCHH--HCCEEEEEchhhcCCCC-ceEEEEEC---HHHHhhhhcccCCCCCCchhhhHHHHH
Confidence            999999999843   3333332  26789999999998654 25555556   45555544210                


Q ss_pred             -----ccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCcccC--C--CCceEEEeeCCCCC
Q 015768          262 -----DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG--G--EGAIYLWARLPEKH  330 (400)
Q Consensus       262 -----~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~~~~~~~~~~~~~~  330 (400)
                           ..+.++++....+++..+++.-. . ..+.+.++++++.+++++.|++.+..+...  +  .+.....+.+++. 
T Consensus       227 ~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g-  305 (361)
T TIGR01366       227 DNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDD-  305 (361)
T ss_pred             hccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCc-
Confidence                 12345566665556666665321 1 256777889999999999999988644332  1  1223344555543 


Q ss_pred             CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          331 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       331 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+.+++...| +++||.+.++......+.+|+|+.. +|.+|++.+++.|++++++
T Consensus       306 ~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~  360 (361)
T TIGR01366       306 IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER  360 (361)
T ss_pred             cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence            4788888877 4789999876433346789999888 9999999999999998765

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.86  E-value=1.5e-19  Score=158.33  Aligned_cols=290  Identities=19%  Similarity=0.212  Sum_probs=195.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCC
Q 015768           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSK  146 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~  146 (400)
                      +...+.+.+++..+.|  .-.-+.+.+++.|+..++..+.++||+|+...--|.+...    .++.+|+++.++ ..   
T Consensus        61 NPT~~vlE~RiAaLEG--G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv-d~---  134 (426)
T COG2873          61 NPTTDVLEERIAALEG--GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV-DP---  134 (426)
T ss_pred             CchHHHHHHHHHHhhc--chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEe-CC---
Confidence            3444555555555543  1223667888999999999999999999999888877554    457889999988 32   


Q ss_pred             CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                         .|+|.+++.+++++  |+|+++...||.+.+.|   +++|+++|++||+++|+|.....-    .-..+.+.+.+|+
T Consensus       135 ---~d~~~~~~aI~~nT--kavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atp----yl~rP~~hGADIV  202 (426)
T COG2873         135 ---DDPENFEAAIDENT--KAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATP----YLCRPIEHGADIV  202 (426)
T ss_pred             ---CCHHHHHHHhCccc--ceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcc----eecchhhcCCCEE
Confidence               26899999999998  99999999999999999   999999999999999999998732    1233456788899


Q ss_pred             EeccccccCCCcceeEEEEccCCcHHHHH--HHHHh-----------------------------hccCCcCccHHHHHH
Q 015768          227 LFSFSKAYGMMGWRVGYIAYPSEVEGFAT--QLLKV-----------------------------QDNIPICASIISQHL  275 (400)
Q Consensus       227 ~~s~sK~~g~~g~~~G~i~~~~~~~~~~~--~l~~~-----------------------------~~~~~~~~~~~~~~~  275 (400)
                      +.|++|++|..|.-+|-++.+...-++..  ++..+                             .+-..-+.+++....
T Consensus       203 vHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl  282 (426)
T COG2873         203 VHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFL  282 (426)
T ss_pred             EEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHH
Confidence            99999999878887777665542111110  00000                             000112233333333


Q ss_pred             HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc------------------CCCCceEEEeeCCCCCCCHHHHH
Q 015768          276 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK------------------GGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       276 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      ....|    +-+.-+++++.+|+..+.+.|++++.+.++                  +...+-.+.+.+........++.
T Consensus       283 ~lqGl----ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi  358 (426)
T COG2873         283 LLQGL----ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFI  358 (426)
T ss_pred             HHhch----hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHH
Confidence            33333    335667889999999999999987763322                  11123456666665432233443


Q ss_pred             HHH------H---HhcCeEEeCCCccC-------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          338 RWL------A---HRHGVVVIPGGACG-------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       338 ~~l------~---~~~gi~v~~g~~~~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +.|      .   +.+-+.+-|.+.-+             .++.||+|++.   |++++.++.|++++++
T Consensus       359 ~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI---Ed~~DiiaDl~qAl~~  425 (426)
T COG2873         359 DALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI---EDIDDIIADLEQALEA  425 (426)
T ss_pred             HHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhc
Confidence            322      1   01224444543321             26799999997   7778888888888864

>PRK06148 hypothetical protein; Provisional

Probab=99.86  E-value=5.7e-19  Score=183.03  Aligned_cols=345  Identities=12%  Similarity=0.105  Sum_probs=224.7

Q ss_pred             hcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCC-CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSIS-KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      .+|+.++||..+...++ .+|+|.+++.+.+.+.... .|     ..+...++++.|.+...-..+.++|+++|++|++.
T Consensus       621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~-----~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~  695 (1013)
T PRK06148        621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRY-----LHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSL  695 (1013)
T ss_pred             CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCc-----CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence            55788999988875664 7899999999998763211 12     23345566666665543223689999999999999


Q ss_pred             HHHHhc--CCCCEEEEeCCCccchhHHHHh-cC------------cEEEEeccCC--CC-CCC-CC-------HHHHHHh
Q 015768          105 IVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG------------VTHILVGPCS--SK-TLH-PD-------ADWLEKT  158 (400)
Q Consensus       105 ~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g------------~~~~~~~~~~--~~-~~~-~~-------~e~l~~~  158 (400)
                      +++...  ....+|+....+|++....... .+            ..+..+ +..  .. .++ .+       .+.+++.
T Consensus       696 AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~l~~~  774 (1013)
T PRK06148        696 ALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVA-EVPDSYRGPERWPDAEHGRRFAESVAEQ  774 (1013)
T ss_pred             HHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEc-CCCCccccCCCCChhhhHHHHHHHHHHH
Confidence            999875  2346899999999887643211 11            011111 110  00 011 01       1345554


Q ss_pred             hc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-ccccCCCcEEEEecccc
Q 015768          159 LE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HCCVEGDHVVNLFSFSK  232 (400)
Q Consensus       159 l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~i~~~s~sK  232 (400)
                      +.    ....+.+++++..+...|. ..|.++++++.++|++||+++|.||++.+|...|.. ......+...-+.+++|
T Consensus       775 i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK  854 (1013)
T PRK06148        775 IAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGK  854 (1013)
T ss_pred             HHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecc
Confidence            43    1233678888765555565 568889999999999999999999999877544431 11111222222446689


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHh-hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----  307 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----  307 (400)
                      .+| .|+++|.++++   +++.+.+... ....+++.|+++..++.+.|+..++  ++..++.++..++|++.|++    
T Consensus       855 ~lg-gG~Plgav~~~---~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~  928 (1013)
T PRK06148        855 PIG-NGHPMGAVVTT---REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED--EDLQRNALEIGNYLLAGLRELQDR  928 (1013)
T ss_pred             ccc-CCcceEEEEEc---HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHh
Confidence            998 88999999998   7887776532 2346888999999999998875221  23445555666666666654    


Q ss_pred             CCCCcccCCCCceEEEeeCCCCC----CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          308 LGEGAVKGGEGAIYLWARLPEKH----LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      ++.+.-+... |.++-+.+....    .+   ...+...++ ++||++.+...  ..+.+||.+.. +|++++++++++|
T Consensus       929 ~~~i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l 1004 (1013)
T PRK06148        929 FDIIGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVL 1004 (1013)
T ss_pred             CCCceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHH
Confidence            3433333344 566656653211    01   234666665 79999976432  25789999887 8999999999999


Q ss_pred             HHHHHHHh
Q 015768          380 RRGLEELV  387 (400)
Q Consensus       380 ~~~l~~~~  387 (400)
                      .+++.++.
T Consensus      1005 ~~~l~~~~ 1012 (1013)
T PRK06148       1005 DDVLAAAL 1012 (1013)
T ss_pred             HHHHHHHh
Confidence            99998753

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.86  E-value=7.1e-19  Score=167.45  Aligned_cols=364  Identities=15%  Similarity=0.132  Sum_probs=217.0

Q ss_pred             HHHHhhhcCchHHH---HHHH-HH---hcCCCeEEcCCCC--CCCC-CcHHHHH--HHHHhhcCCCCCCCCCCCCcHHHH
Q 015768            7 LAKRALETEMPIMV---QIQE-LV---RGAKNAVSLAQGV--VYWQ-PPKMAME--KVKELVWDPSISKYGADEGLPELR   74 (400)
Q Consensus         7 ~~~~~~~~~~~~~~---~~~~-~~---~~~~~~i~~~~~~--~~~~-~~~~v~~--a~~~~~~~~~~~~y~~~~g~~~~~   74 (400)
                      +|+++.....+.+.   +-.- ++   .+|+.++||..+.  ..++ .+|++.+  ++.+.+.+-............+..
T Consensus        15 ~~~~~~~~~~p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~   94 (443)
T PRK08297         15 LARHILVDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEM   94 (443)
T ss_pred             HHHHHhhcCCCcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHH
Confidence            56666655544441   2111 11   2688899998775  4454 7899999  998888652110000001112344


Q ss_pred             HHHHHHHHhhcC-CCCCcEEEeCChHHHHHHHHHHhc----------C---C-CCEEEEeCCCccchhHHHHh-cCcEE-
Q 015768           75 DALVKKLNQENK-LYKSSVMVTAGANQAFVNIVLTLC----------D---A-GDSVVMFAPYYFNSYMSFQM-TGVTH-  137 (400)
Q Consensus        75 ~~~a~~l~~~~~-~~~~~i~~~~g~t~a~~~~~~~l~----------~---~-gd~vlv~~p~~~~~~~~~~~-~g~~~-  137 (400)
                      .++++.+.+..+ -..+.++|+++|++|++.+++...          .   + ..+|+....+|++....... .|... 
T Consensus        95 ~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~  174 (443)
T PRK08297         95 ARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPR  174 (443)
T ss_pred             HHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCccc
Confidence            446666655432 124689999999999999999873          1   1 25799999999987644332 22110 


Q ss_pred             --EEec-------cCCCC-----CCC---C------CHHHHHHhhcc-CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHH
Q 015768          138 --ILVG-------PCSSK-----TLH---P------DADWLEKTLET-KPTPKLVSVVNPGNPSGT-YIPERLLKRISDL  192 (400)
Q Consensus       138 --~~~~-------~~~~~-----~~~---~------~~e~l~~~l~~-~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l  192 (400)
                        ....       |...-     +..   .      +++.+++.+.. ...+.+|+++..+...|. .+|.+++++|.++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~l  254 (443)
T PRK08297        175 KTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMREL  254 (443)
T ss_pred             ccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHH
Confidence              0000       00000     000   0      23455566652 234688888866666675 4788999999999


Q ss_pred             HHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH-HHH-HhhccCCcCc
Q 015768          193 CKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT-QLL-KVQDNIPICA  268 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~-~l~-~~~~~~~~~~  268 (400)
                      |++||+++|.||++.+|...|......  .-..+++  +++|.++ .|   |.+.++. ..+... .+. ......+++.
T Consensus       255 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv--~~gK~l~-~~---a~l~~~~-i~~~~~~~~~~~~~~~~T~~g  327 (443)
T PRK08297        255 CDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIV--AFGKKTQ-VC---GIMAGRR-VDEVEDNVFAVSSRINSTWGG  327 (443)
T ss_pred             HHHcCCEEEEechhhccCccchHHHHHhcCCCCCEE--Eeccccc-cc---ceecchH-HHHhhhhhccCccccCCCCCc
Confidence            999999999999998775544321111  1122344  5689874 22   4444331 001211 111 1124567888


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCc-ccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                      ++++..++.+.|+...+  ++..++.+++.+++.+.|++    .+.+. .+.+. |.++.+.++... ....+...++ +
T Consensus       328 npl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~-~  402 (443)
T PRK08297        328 NLVDMVRARRILEVIEE--DGLVENAARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLW-E  402 (443)
T ss_pred             cHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHH-H
Confidence            99999998888874211  23444455555555555544    44321 33344 677777775321 2456777776 8


Q ss_pred             cCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       344 ~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +||++.|+.    .+.+||+++. ++++++++++++|.+++.++
T Consensus       403 ~Gvl~~~~~----~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        403 EGVLVLPCG----ERSIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             CCEEEecCC----CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            999998743    3679998776 79999999999999999865

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.86  E-value=6.2e-19  Score=150.31  Aligned_cols=358  Identities=18%  Similarity=0.197  Sum_probs=253.8

Q ss_pred             hcCchHHHHHHHHHhcC--CCeEEcCCCC--CCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhh
Q 015768           13 ETEMPIMVQIQELVRGA--KNAVSLAQGV--VYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        13 ~~~~~~~~~~~~~~~~~--~~~i~~~~~~--~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      .........+.+.+.++  +-.++|+.|.  .+-  |.--++++.....+.+..  ...|-+..|.+.++.+.++.+...
T Consensus        11 ~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~   90 (410)
T KOG1412|consen   11 VAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGA   90 (410)
T ss_pred             cCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCC
Confidence            34455666777666554  4478888864  222  222334444443343322  456778899999999999886433


Q ss_pred             c--CCCCCcEEE--eCChHHHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc-EEEEecc-CCCCCCCCCHHHHH
Q 015768           85 N--KLYKSSVMV--TAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV-THILVGP-CSSKTLHPDADWLE  156 (400)
Q Consensus        85 ~--~~~~~~i~~--~~g~t~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~-~~~~~~~-~~~~~~~~~~e~l~  156 (400)
                      .  .++.++++-  +-+||.|+.+...-+..  +..+|.+..|+|.++..+++..|+ .+..+ + .+.+.-.+|++.+.
T Consensus        91 ~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y-~yWd~~~k~~d~e~~L  169 (410)
T KOG1412|consen   91 DSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATY-PYWDAENKCVDLEGFL  169 (410)
T ss_pred             CchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeee-eeecCCCceecHHHHH
Confidence            2  123444332  35677888888877642  356799999999999999999995 44444 3 33344567988888


Q ss_pred             HhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-------ccCCCcEEEEe
Q 015768          157 KTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-------CVEGDHVVNLF  228 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-------~~~~~~~i~~~  228 (400)
                      ..|+..+.-..+++..+ +||||+-++.|.+.+|+++.++.+.+.+.|-+|.+|+.+.....       ...+...+++-
T Consensus       170 sdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~Q  249 (410)
T KOG1412|consen  170 SDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQ  249 (410)
T ss_pred             HHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence            88886653355555544 99999999999999999999999999999999999887654221       11244578899


Q ss_pred             ccccccCCCcceeEEE--EccCCcHHH----HHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHH
Q 015768          229 SFSKAYGMMGWRVGYI--AYPSEVEGF----ATQLLKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVR  296 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i--~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~  296 (400)
                      ||+|.+|+-+-|+|.+  +.++  +..    ..++....+..-.+++..+.......|...+   +|   ++.+..++.+
T Consensus       250 SFaKNfGlYneRvGnltvv~~n--~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~  327 (410)
T KOG1412|consen  250 SFAKNFGLYNERVGNLTVVVNN--PAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKK  327 (410)
T ss_pred             hhhhhcccccccccceEEEecC--hhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999985  3443  443    3445555555666788888898888888632   33   4566788888


Q ss_pred             HHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHH
Q 015768          297 NREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCK  373 (400)
Q Consensus       297 ~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~  373 (400)
                      .+..|++.|..++.   ..-+..+.|+|.+-.+.+      ..++.|.+++.|++.+.+        |++++.+....++
T Consensus       328 MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp------~qV~~li~~h~vyLl~~G--------RInisGLN~~Nve  393 (410)
T KOG1412|consen  328 MRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP------AQVDHLIENHKVYLLSDG--------RINISGLNMKNVE  393 (410)
T ss_pred             HHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH------HHHHHHHHhceEEEecCC--------cEeeeccccccHH
Confidence            89999998888743   233345568888877652      446678889999998765        9999887788899


Q ss_pred             HHHHHHHHHHHHHh
Q 015768          374 AAADRLRRGLEELV  387 (400)
Q Consensus       374 ~~~~~l~~~l~~~~  387 (400)
                      ...+++.++++.+.
T Consensus       394 yVAkAIde~Vr~~~  407 (410)
T KOG1412|consen  394 YVAKAIDETVRAIK  407 (410)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999998888754

>PLN02263 serine decarboxylase

Probab=99.86  E-value=9.3e-18  Score=157.13  Aligned_cols=319  Identities=12%  Similarity=0.027  Sum_probs=223.2

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCC---CcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhcC--CCCEEEE
Q 015768           46 KMAMEKVKELVWDPSISKYGADE---GLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCD--AGDSVVM  118 (400)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~---g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~~--~gd~vlv  118 (400)
                      +..+..+.....++...++..+.   +..++++.+.+|+.+.+|.+++  .-++|+|||+++..++.+.++  +...+++
T Consensus       104 ~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~  183 (470)
T PLN02263        104 YGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYA  183 (470)
T ss_pred             hhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEE
Confidence            34444444444443222232222   5789999999999999998753  468899999999999988764  3347889


Q ss_pred             eCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      ++-.|+++..+++.+|++++.+ |.++++ .+|++.|++.+..++ .|-+|+.+.++.++|.+-|   +.+|.++|+++|
T Consensus       184 S~~aH~Sv~KAa~llgi~~~~V-p~d~~g-~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g  258 (470)
T PLN02263        184 SRESHYSVFKAARMYRMECVKV-DTLVSG-EIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECG  258 (470)
T ss_pred             cCCccHHHHHHHHhcCCcceEe-ccCCCC-cCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcC
Confidence            9999999999999999999999 987654 799999999887443 2456666678999999999   899999999999


Q ss_pred             C-----EEEEcccccccccC---CC-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------
Q 015768          198 S-----WLVVDNTYEYFMYD---GR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------  261 (400)
Q Consensus       198 ~-----~li~D~a~~~~~~~---~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------  261 (400)
                      +     |+++|.+|+++...   .. ++.+ ....+=+..+.||+++ ....+|.+..++   ...+.+....       
T Consensus       259 ~~~~~iwlHVDAA~GG~~lPf~~~~~~~df-~~~vDSIsvD~HK~l~-~P~~cgvll~R~---~~~~~~~~~~~Yl~~~d  333 (470)
T PLN02263        259 FSQDRFYIHCDGALFGLMMPFVKRAPKVTF-KKPIGSVSVSGHKFVG-CPMPCGVQITRM---EHINVLSSNVEYLASRD  333 (470)
T ss_pred             CccCCeeEEEeccchhhHhhhcccccccCC-CcCccEEEECCccccC-CCcCEEEEEEeh---hhHhhhccChHhhCCCC
Confidence            6     99999999876541   11 1111 1224556678999986 668899999884   3333332110       


Q ss_pred             ccCCcCc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHH
Q 015768          262 DNIPICA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVR  338 (400)
Q Consensus       262 ~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (400)
                      .....+-   ..+..++....+  |.+.+.++.++..++++++.+.|++.+...+..|. .+.+.++.+.    . +.  
T Consensus       334 ~ti~gSR~g~~al~lW~~L~~~--G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~-s~~V~f~~p~----~-~~--  403 (470)
T PLN02263        334 ATIMGSRNGHAPIFLWYTLNRK--GYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNEL-SSTVVFERPK----D-EE--  403 (470)
T ss_pred             CCcCCCCCcHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCC-ceEEEEecCc----h-HH--
Confidence            0111111   233334333333  56778999999999999999999998775555565 5666665442    1 11  


Q ss_pred             HHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccCcc
Q 015768          339 WLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGMV  392 (400)
Q Consensus       339 ~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~  392 (400)
                        . .+|..+..     .++.+++++.. .+.+.++++++.|++.......++..
T Consensus       404 --~-~~gW~L~~-----~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~~~~~~~  450 (470)
T PLN02263        404 --F-VRRWQLAC-----QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTWYPDGKV  450 (470)
T ss_pred             --h-hcceEEcc-----CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhhhhcccc
Confidence              1 35666654     23568888665 68899999999999998876544433

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.85  E-value=3.6e-19  Score=168.77  Aligned_cols=336  Identities=10%  Similarity=0.054  Sum_probs=204.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHh-hcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKEL-VWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~-~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+. .....  ...+. .....++.+.+.+.+.+...-..+.++|++++++
T Consensus        55 ~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~-~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE  133 (464)
T TIGR00699        55 VDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALG-NFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD  133 (464)
T ss_pred             CCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCC-cHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence            5578899998876  4444 789999999874 23211  11121 1112233333333222232222378999999999


Q ss_pred             HHHHHHHHhcC--------------------------CC---CEEEEeCCCccchhHHHHh-cCcE-----------EEE
Q 015768          101 AFVNIVLTLCD--------------------------AG---DSVVMFAPYYFNSYMSFQM-TGVT-----------HIL  139 (400)
Q Consensus       101 a~~~~~~~l~~--------------------------~g---d~vlv~~p~~~~~~~~~~~-~g~~-----------~~~  139 (400)
                      |++.+++....                          +|   .+|+....+|++....... .|..           ...
T Consensus       134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~  213 (464)
T TIGR00699       134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ  213 (464)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence            99999997731                          11   2799999999887644322 2211           111


Q ss_pred             eccCCCCC--C-----------CCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcc
Q 015768          140 VGPCSSKT--L-----------HPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDN  204 (400)
Q Consensus       140 ~~~~~~~~--~-----------~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~  204 (400)
                      + |.....  +           .-+++.+++.+.. ...+.+|+++..+...|.+. +.++++++.++|++||+++|+||
T Consensus       214 ~-p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE  292 (464)
T TIGR00699       214 A-PFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE  292 (464)
T ss_pred             c-CCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence            1 111000  0           0135667777752 23368888887677778765 78999999999999999999999


Q ss_pred             cccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHh
Q 015768          205 TYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL  280 (400)
Q Consensus       205 a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  280 (400)
                      ++.++...|..+..    .....|+  .+++|.+|..    |+++.+   +.+ ..........+++.++++..++.+.|
T Consensus       293 V~tGfGrtG~~fa~e~~gv~~~PDi--~t~gK~lg~g----G~~~~~---~~~-~~~~~~~~~~T~~gnp~~~aaa~a~L  362 (464)
T TIGR00699       293 VQTGVGATGKFWAHEHWNLDDPPDM--VTFSKKFQTA----GYFFHD---PAF-RPNKPYRQFNTWMGDPSRALILREII  362 (464)
T ss_pred             eeeCCCCCcchhHHHhcCCCCCCCE--EEehhhhccC----Cccccc---hhc-cCCCCcccccCCCCCHHHHHHHHHHH
Confidence            99877554432111    1111333  4668998523    444443   211 11112234567888998888888777


Q ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHhcc----CC-CCcccC--CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCc
Q 015768          281 QTGPEWVTERVKDLVRNREIIREALSP----LG-EGAVKG--GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA  353 (400)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~  353 (400)
                      +..++  .+..++..+..+++++.|++    ++ .+..+.  .. |.++-+.++... ....+...++ ++|+++.+.  
T Consensus       363 ~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~-Glm~gie~~~~~-~~~~i~~~~~-~~Gvl~~~~--  435 (464)
T TIGR00699       363 QEIKR--KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGR-GTFIAWDTPDEA-KRDKLLKKAR-NNGVNIGGC--  435 (464)
T ss_pred             HHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCe-EEEEEEecCCHH-HHHHHHHHHH-HCCcEEecC--
Confidence            64221  23444555555555555554    44 222232  33 777777775321 2456776665 789999763  


Q ss_pred             cCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          354 CGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       354 ~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                        +.+.+||.+.. +++++++.++++|.+++
T Consensus       436 --g~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       436 --GVKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             --CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence              35789999887 89999999999998864

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.85  E-value=9.4e-18  Score=155.63  Aligned_cols=308  Identities=13%  Similarity=0.082  Sum_probs=212.0

Q ss_pred             CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-HHhcCcEEEEec
Q 015768           63 KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVG  141 (400)
Q Consensus        63 ~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~  141 (400)
                      .|+.++...++++++++++    |  .+.++.++++|.|++++....++|||.|  +..+|...... +...|+..+-+ 
T Consensus        73 ~Yagd~s~~~LE~~vAe~l----G--~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi-  143 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYY----G--FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDI-  143 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHH----C--CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEee-
Confidence            4777788899999999998    5  4569999999999999877678999965  55555554433 67788754433 


Q ss_pred             cC---------CCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768          142 PC---------SSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTYEYF  209 (400)
Q Consensus       142 ~~---------~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~  209 (400)
                      ..         ++..+++|++.+++.+++.+  .++++.++.++|.. |...|.++++++.++|++||+.+|.|.++...
T Consensus       144 ~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~g  223 (460)
T PRK13237        144 IIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVE  223 (460)
T ss_pred             ecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhc
Confidence            21         24567899999999998532  23456667777877 79999999999999999999999999998743


Q ss_pred             c----------cCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----Cc-CccH
Q 015768          210 M----------YDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----PI-CASI  270 (400)
Q Consensus       210 ~----------~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~----~~-~~~~  270 (400)
                      .          +.+.+..    ....-.+..+.|++|.++.+ . .|++++++  ++++++++...-.+    ++ +.+.
T Consensus       224 na~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i~t~D--~eL~~~~r~~~~~~eG~~tygg~~g  299 (460)
T PRK13237        224 NAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN-I-GGFLAMND--EELFDEAKELVVVYEGMPSYGGMAG  299 (460)
T ss_pred             ChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC-C-ceEEEECC--HHHHHHHHHhccccCCCcCCCChhh
Confidence            1          1111110    00123567788999998643 1 48888887  89999988764221    22 2333


Q ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC-------CCCCCHHHHHHHHHHh
Q 015768          271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP-------EKHLDDFEVVRWLAHR  343 (400)
Q Consensus       271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~  343 (400)
                      -...+++..|.+..+  ..+.+.-..+.++|.+.|.+.|. .+..|.+|.-++++..       ........++.+|..+
T Consensus       300 rd~~alAvgl~E~~~--~~y~~~ri~~~~~l~~~L~~~Gv-pv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~  376 (460)
T PRK13237        300 RDMEAMAIGIEESVQ--YEYIEHRVGQVRYLGEKLLAAGV-PIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIE  376 (460)
T ss_pred             hHHHHHHhHHHhhch--HHHHHHHHHHHHHHHHHHHHCCC-ceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHH
Confidence            345555555654332  25555556677888899888775 5666777887777532       2223477888888888


Q ss_pred             cCeEEeC-CCcc-C-----C------CCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIP-GGAC-G-----C------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       344 ~gi~v~~-g~~~-~-----~------~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .||--.. |+.. +     +      -..+|+++.+  -|.+-++...++|....++-
T Consensus       377 ~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~  434 (460)
T PRK13237        377 SGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR  434 (460)
T ss_pred             hCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence            9987642 2221 1     0      1479999886  57788888888887777653

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.85  E-value=4.7e-18  Score=142.41  Aligned_cols=333  Identities=17%  Similarity=0.179  Sum_probs=224.2

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC--------CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG--------ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--------~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      ++|+++-=.-.--.+++..+++.+.-+..+.-.|.        ..+-...+.+.+++++    |  -|.+-+|.|+.++=
T Consensus        16 ~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl----g--~D~~R~t~GARe~K   89 (382)
T COG1103          16 GFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL----G--MDEVRVTAGAREAK   89 (382)
T ss_pred             CccccChhhccCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh----C--CceeeecccchhhH
Confidence            45554432222236788888888876653322221        1122445666677777    5  47789999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhc----c-CCCCeEEEEeCCCCC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLE----T-KPTPKLVSVVNPGNP  176 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~----~-~~~~~~v~l~~p~np  176 (400)
                      +.++.+++++||.|++...+|++.+-+++..|.++..+ |.... .+.+++|...+.+.    + ...+.+.+++++...
T Consensus        90 favMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eV-p~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~  168 (382)
T COG1103          90 FAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEV-PNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGE  168 (382)
T ss_pred             HHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEec-CCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCC
Confidence            99999999999999999999999999999999999999 75432 36778877777665    2 234788999999888


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      .|.+.+   .++++++|++++++++...+|.-   +..+......+.+++++|-+|+++ +.-++|.+..+   +++.+.
T Consensus       169 YGNl~D---akkva~ic~e~gvPlllN~AYt~---Grmpvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~---eE~ae~  238 (382)
T COG1103         169 YGNLAD---AKKVAKICREYGVPLLLNCAYTV---GRMPVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMS---EEWAEI  238 (382)
T ss_pred             cCCchh---hHHHHHHHHHcCCceEeecceee---ccccccccccCCCEEEecCccchh-ccCCeeEEeeh---hHHHHH
Confidence            999998   89999999999999999999984   344455556678899999999996 55579999999   677766


Q ss_pred             HHHhhc-cC--------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--CCCceEEEee
Q 015768          257 LLKVQD-NI--------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWAR  325 (400)
Q Consensus       257 l~~~~~-~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~  325 (400)
                      +-+... .+        ..+.-......+.+.+-.-.+ ..++.+.-.+..+.+.+.|++++++...+  |...-.+.+.
T Consensus       239 V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~e-RVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fe  317 (382)
T COG1103         239 VLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVE-RVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFE  317 (382)
T ss_pred             HHhhcccccccceeeeecccccCchHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeec
Confidence            543321 00        111111111111111111001 12333444556778889999988755443  3223333334


Q ss_pred             CCCCC-------CCHHHHHHHHHHhcCeE-EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          326 LPEKH-------LDDFEVVRWLAHRHGVV-VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       326 ~~~~~-------~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .|...       ....=+++.| +++||. +.||    ...++.+|.-.++.|+++..++.+++.++++
T Consensus       318 tp~f~eIakk~~r~gyFlY~EL-K~RgI~GI~~G----~Tk~~K~svyGl~~Eqve~V~~afkeI~eky  381 (382)
T COG1103         318 TPVFHEIAKKHKRKGYFLYEEL-KKRGIHGIQPG----QTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY  381 (382)
T ss_pred             CchHHHHHHhCcCCceeeHHHH-HhcCccccccC----ceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            33211       0111245555 577876 5554    3678999976689999999999999988764

>PRK04311 selenocysteine synthase; Provisional

Probab=99.85  E-value=3.1e-18  Score=162.41  Aligned_cols=319  Identities=18%  Similarity=0.118  Sum_probs=202.2

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCC-cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEG-LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g-~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      +.++++++++.+.+.......|....+ .....+.+.+.+++..|.  ++.+++++++.|+..++.++ .+||+|+++..
T Consensus        97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--e~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~  173 (464)
T PRK04311         97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--EDALVVNNNAAAVLLALNAL-AAGKEVIVSRG  173 (464)
T ss_pred             CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHh-CCCCEEEEcch
Confidence            367999999999887643222221111 011123444444444464  46788888999999988665 68999999987


Q ss_pred             Cccc------hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC--Cc--cCCCHHHHHHHHH
Q 015768          122 YYFN------SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP--SG--TYIPERLLKRISD  191 (400)
Q Consensus       122 ~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np--tG--~~~~~~~l~~i~~  191 (400)
                      .|..      +.+.++..|++++++ +.+..   .+++++++.+++++  ++|++++++|+  +|  ...|   +++|++
T Consensus       174 e~~~~ggs~~i~~~~~~~G~~l~~v-~~~~~---t~~~dle~aI~~~T--klV~~vh~sN~~i~G~~~~~d---l~eI~~  244 (464)
T PRK04311        174 ELVEIGGAFRIPDVMRQAGARLVEV-GTTNR---THLRDYEQAINENT--ALLLKVHTSNYRIEGFTKEVS---LAELAA  244 (464)
T ss_pred             hhhhcCcchhhHHHHHHCCcEEEEE-CCCCC---CCHHHHHHhcCccC--eEEEEEcCCCccccccCCcCC---HHHHHH
Confidence            5542      234567889999988 55422   37899999998777  99999999998  34  5678   999999


Q ss_pred             HHHHcCCEEEEcccccccc----cC--CCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          192 LCKAAGSWLVVDNTYEYFM----YD--GRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~----~~--~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      +|++||+++++|.+.+.+.    ++  ..+.  .....+.+++++|.+|++|  |...|+++++   ++++++++...-.
T Consensus       245 lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~li~~l~~~~~~  319 (464)
T PRK04311        245 LGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIARLKKHPLK  319 (464)
T ss_pred             HHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCccccc--CCceEEEEEc---HHHHHHHhhchhH
Confidence            9999999999999654331    11  1111  1123578899999999996  3358999988   7888777642221


Q ss_pred             CCcCccHHHHHHHHHHhc----CCc--------HHHHHHHHHHHHHHHHHHHHhccCCC----CcccCC----------C
Q 015768          264 IPICASIISQHLALYSLQ----TGP--------EWVTERVKDLVRNREIIREALSPLGE----GAVKGG----------E  317 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~----~~~--------~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~----------~  317 (400)
                      ...........++..+|.    ...        .-+....+++.++++.+.+.|+.+..    ..+...          .
T Consensus       320 r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~  399 (464)
T PRK04311        320 RALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPV  399 (464)
T ss_pred             HHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcC
Confidence            222223333333333333    111        11223346777788888888877531    122211          1


Q ss_pred             C-ceEEEeeCCCCCCCHHHHHHHHHHhcC--eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          318 G-AIYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       318 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      . -.-+.+.+.....+..++..+|. +..  |..+.     ..+.+.+.+.+..++|++..+++|++++.
T Consensus       400 ~~~~~~~v~~~~~~~~~~~l~~~lr-~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~~~~~~  463 (464)
T PRK04311        400 DRLPSAAVTLTPKDRSLEALAARLR-LLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAALLEALN  463 (464)
T ss_pred             CCCCeEEEEEeCCCCCHHHHHHHHh-cCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence            0 01222333322346778887764 543  44432     57888999888888999999999888753

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.84  E-value=4e-18  Score=156.77  Aligned_cols=347  Identities=14%  Similarity=0.105  Sum_probs=221.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++|-.+|.  +..+ -++++.+++.+.+.+-..... ....... ..++++.|.+... -+-++|+|++|+++|+
T Consensus        41 ~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~-~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAv  118 (449)
T COG0161          41 IDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF-GGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAV  118 (449)
T ss_pred             CCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh-cccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHH
Confidence            3456666665554  3333 579999999999886331111 1111222 4566666665544 2358999999999999


Q ss_pred             HHHHHHhc-------CCC-CEEEEeCCCccchhH-HHHhcC-------------cEEEEeccCCC-------CCCC----
Q 015768          103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYM-SFQMTG-------------VTHILVGPCSS-------KTLH----  149 (400)
Q Consensus       103 ~~~~~~l~-------~~g-d~vlv~~p~~~~~~~-~~~~~g-------------~~~~~~~~~~~-------~~~~----  149 (400)
                      +.+++...       +|. .+++.-..+|++-.- .+...|             ..+..+ |...       ..+.    
T Consensus       119 EtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~-~~P~~y~~~~~~~~~~~~~  197 (449)
T COG0161         119 ETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHL-PAPYAYRRGFFGEGDEEFA  197 (449)
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceec-CCCcccccCCCCCChHHHH
Confidence            99999864       233 348888888876442 221111             111222 2211       0111    


Q ss_pred             CCHHHHHHhhcc-C-CCCeEEEEeCCCCC-Ccc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          150 PDADWLEKTLET-K-PTPKLVSVVNPGNP-SGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       150 ~~~e~l~~~l~~-~-~~~~~v~l~~p~np-tG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                      -.++.|++++.. . .++.+++++....- +|+ ++|+..++++.++|++||+++|.||+-.+|...|..+.....+...
T Consensus       198 ~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~P  277 (449)
T COG0161         198 EAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVP  277 (449)
T ss_pred             HHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCC
Confidence            235677777763 2 23677777654444 776 4677789999999999999999999999888777655444333333


Q ss_pred             EEeccccccCCCcceeEEEEccCCcHHHHHHHHH-----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      .+-+++|.++.+=+++|.++..   .++.+.+..     +.+..+|+.++++..++.+.|+..++  +...++.++...+
T Consensus       278 Di~~~aKGLT~GY~Pl~a~l~~---~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~--e~l~~~~~~~~~~  352 (449)
T COG0161         278 DILCLAKGLTGGYLPLSAVLTS---DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE--EDLLERVAEIGAY  352 (449)
T ss_pred             CeeeecccccccchhhHhHhhh---HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Confidence            3446689986333678888877   577776654     34567889999999999998885221  2333444444555


Q ss_pred             HHHHhcc----CCCCcccCCCCceEEEeeCCCCCCC--------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768          301 IREALSP----LGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  367 (400)
Q Consensus       301 l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~  367 (400)
                      +.+.|++    .+.+--++.. |++..+.+.....+        ...+.... .++|++++|.     .+.+=+++.. .
T Consensus       353 l~~~L~~~l~~~p~VgdVR~~-Gli~~iElv~d~~t~~~f~~~~~~~~~~~~-~e~Gl~iRp~-----g~~i~~~PPlii  425 (449)
T COG0161         353 LQAGLQAALADHPLVGDVRGL-GLIGAIELVADKATKTPFEARVGARVRAAA-LERGLLIRPL-----GDVIYLMPPLII  425 (449)
T ss_pred             HHHHHHHhcccCCcEEEeecc-ceEEEEEEecccccccchhhhHHHHHHHHH-HHCCeEEeec-----CCEEEEcCCccC
Confidence            5555554    3333333343 66666665433211        33455544 4899999995     4577778777 8


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015768          368 VEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      |+++++++++++.+++++...
T Consensus       426 t~~eid~l~~~l~~al~~~~~  446 (449)
T COG0161         426 TREEIDELVDALREALDETLA  446 (449)
T ss_pred             CHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999998654

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.84  E-value=8.5e-18  Score=161.75  Aligned_cols=312  Identities=10%  Similarity=0.067  Sum_probs=206.7

Q ss_pred             HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-------------CCcEEEeCChHHHHHHHHHHhcC-------
Q 015768           52 VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-------------KSSVMVTAGANQAFVNIVLTLCD-------  111 (400)
Q Consensus        52 ~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-------------~~~i~~~~g~t~a~~~~~~~l~~-------  111 (400)
                      +...+.++ ...+..++...++++.+.+|+.+..+-.             ...-++|+|+|+|+..++.+..+       
T Consensus       110 l~~~lN~n-~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~  188 (522)
T TIGR03799       110 LMVALNQN-LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG  188 (522)
T ss_pred             HHHHhcCC-cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence            44444333 4556567778899999999998886421             12358899999999988877532       


Q ss_pred             -------------------CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhc----cCCCC
Q 015768          112 -------------------AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLE----TKPTP  165 (400)
Q Consensus       112 -------------------~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~  165 (400)
                                         ++..|+++.-+|+++..+++.+|.   +++.+ |.++++ .+|+++|++.++    .++  
T Consensus       189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~v-p~d~~g-~~d~~~L~~~i~~~~~~g~--  264 (522)
T TIGR03799       189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAI-KTDANN-RIDVDALRDKCAELAEQNI--  264 (522)
T ss_pred             cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEE-EeCCCC-cCCHHHHHHHHHHHHHCCC--
Confidence                               134689999999999999999898   78888 888765 789999999886    333  


Q ss_pred             eEEEEe--CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccC-CCcEEEEeccccccCCCcce
Q 015768          166 KLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVE-GDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       166 ~~v~l~--~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~-~~~~i~~~s~sK~~g~~g~~  240 (400)
                      +.+.++  ..++.+|.+.|   +.+|+++|+++|+|+++|.+|+....-...+  .... ...+.++.|.||+++ ....
T Consensus       265 ~~~~vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~-~P~g  340 (522)
T TIGR03799       265 KPLAIVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLY-VPMG  340 (522)
T ss_pred             CcEEEEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCC-cCcc
Confidence            444444  55779999999   9999999999999999999998554321111  0111 245788889999885 5577


Q ss_pred             eEEEEccCCcHHHHHHHHHhhc-------------cCCcCcc--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          241 VGYIAYPSEVEGFATQLLKVQD-------------NIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~-------------~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      +|.++.++  +...+.+.....             ....+-+  .+..+++...+  +.+.++++.++..++++++.+.|
T Consensus       341 ~G~llvr~--~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~l--G~~G~~~ii~~~~~la~~l~~~L  416 (522)
T TIGR03799       341 AGMVLFKD--PALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHII--GRKGYELLIDQSIEKAKYFADLI  416 (522)
T ss_pred             cEEEEEeC--HHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHH
Confidence            89998876  455444433100             0111112  22334444444  34567899999999999999999


Q ss_pred             ccCCCCcccCCCCceEEEeeCC-CCCC--------------C--H----HHHHHHHHHhcCeE-EeCC----CccCC--C
Q 015768          306 SPLGEGAVKGGEGAIYLWARLP-EKHL--------------D--D----FEVVRWLAHRHGVV-VIPG----GACGC--R  357 (400)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~--~----~~~~~~l~~~~gi~-v~~g----~~~~~--~  357 (400)
                      ++.+.++++.+.....+++++. ....              .  .    ..+.+++. +.|.. +.+.    ..+.+  .
T Consensus       417 ~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~-~~G~~~vs~t~l~~~~~~g~~~  495 (522)
T TIGR03799       417 QQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQR-EAGKSFVSRTRLTPAQYDHQPT  495 (522)
T ss_pred             hhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEecccccCCCCc
Confidence            9987777766544556666642 2110              0  1    23444443 45544 4322    11212  2


Q ss_pred             CeEEEEecc--CCHHHHHHHHH
Q 015768          358 GHLRISFGG--LVEDDCKAAAD  377 (400)
Q Consensus       358 ~~iRi~~~~--~~~~~~~~~~~  377 (400)
                      ..+|+++..  ++.++++..++
T Consensus       496 ~~lR~~~~np~tt~~~i~~~l~  517 (522)
T TIGR03799       496 VVFRVVLANPLTTHEILQDILD  517 (522)
T ss_pred             EEEEEEecCCCCCHHHHHHHHH
Confidence            469999887  67777776554

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK06149 hypothetical protein; Provisional

Probab=99.84  E-value=5.3e-18  Score=175.86  Aligned_cols=342  Identities=14%  Similarity=0.056  Sum_probs=219.1

Q ss_pred             hcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      .+|+.++||..+...++ .+|++.+++.+.+.+.....   .. ..+...++++.|.+...-..+.++|+++|++|++.+
T Consensus       582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~---~~-~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~A  657 (972)
T PRK06149        582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNS---RF-HYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLA  657 (972)
T ss_pred             CCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccc---cc-cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence            45788999988776665 79999999999887643221   11 223556667777655432346899999999999999


Q ss_pred             HHHhc--CCCCEEEEeCCCccchhHHHHhc-Cc-------------EEEEeccCCC--CC-CC-CC-----HHHHHHhhc
Q 015768          106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSS--KT-LH-PD-----ADWLEKTLE  160 (400)
Q Consensus       106 ~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~--~~-~~-~~-----~e~l~~~l~  160 (400)
                      ++...  .....|+....+|++........ +.             .+..+ +...  .+ +. .+     .+++++.++
T Consensus       658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~l~  736 (972)
T PRK06149        658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPV-ESPNTYRGRFRGADSAADYVRDVVAQLE  736 (972)
T ss_pred             HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEe-CCCcccCCcCCCcccHHHHHHHHHHHHH
Confidence            99543  22367888888888755322110 10             01222 1111  00 11 11     234444332


Q ss_pred             ----cCCCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CC--CcEEEEecccc
Q 015768          161 ----TKPTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EG--DHVVNLFSFSK  232 (400)
Q Consensus       161 ----~~~~~~~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~--~~~i~~~s~sK  232 (400)
                          ....+.+|+++..+...| ...+.++++++.++|++||+++|+||++.+|...|...... ..  ..+++  +++|
T Consensus       737 ~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK  814 (972)
T PRK06149        737 ELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAK  814 (972)
T ss_pred             HHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--Eecc
Confidence                223357777775554455 56788999999999999999999999997765444322111 11  22333  7789


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHh-hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----  307 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----  307 (400)
                      .+| .|..+|.++++   +++.+.+... ....+++.|+++..++.+.|+.-++  ++..++.++..++|++.|++    
T Consensus       815 ~lg-~G~Pl~av~~~---~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~  888 (972)
T PRK06149        815 GMG-NGHPLGAVITR---REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLEALADR  888 (972)
T ss_pred             ccc-CCeeeEEEEEc---HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            998 78999999999   7787776531 1224567899999999998875221  23445555555666666654    


Q ss_pred             CCCCcccCCCCceEEEeeCCCC-----C--CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          308 LGEGAVKGGEGAIYLWARLPEK-----H--LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      .+.+..+... |.++-+.+...     .  .....+...++ ++||++.+...  ..+.+||.+.. +++++++.++++|
T Consensus       889 ~~~i~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l  964 (972)
T PRK06149        889 HPLIGAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDML  964 (972)
T ss_pred             CCCeEEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHH
Confidence            3433334444 56665655211     0  01345666665 78999987421  24789999875 7999999999999


Q ss_pred             HHHHHH
Q 015768          380 RRGLEE  385 (400)
Q Consensus       380 ~~~l~~  385 (400)
                      .+++.+
T Consensus       965 ~~~l~~  970 (972)
T PRK06149        965 DRVLTE  970 (972)
T ss_pred             HHHHHh
Confidence            999975

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.83  E-value=3.9e-18  Score=162.26  Aligned_cols=338  Identities=14%  Similarity=0.128  Sum_probs=200.6

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHH--HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAM--EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQA  101 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~--~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a  101 (400)
                      +|+.++||..+.  ..++ .+|+++  +++.+.+.+.................++++.+.+..+. ..+.++++++|++|
T Consensus        36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA  115 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA  115 (431)
T ss_pred             CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence            688999998775  4444 688998  88888877532111111111223334445445444221 24789999999999


Q ss_pred             HHHHHHHhcC--------C------CCEEEEeCCCccchhHHHH-hcCcE---EEEe---------cc-----CCCCCCC
Q 015768          102 FVNIVLTLCD--------A------GDSVVMFAPYYFNSYMSFQ-MTGVT---HILV---------GP-----CSSKTLH  149 (400)
Q Consensus       102 ~~~~~~~l~~--------~------gd~vlv~~p~~~~~~~~~~-~~g~~---~~~~---------~~-----~~~~~~~  149 (400)
                      ++.+++....        .      +.+|+....+|++...... ..|..   -...         .|     .+.....
T Consensus       116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  195 (431)
T TIGR03251       116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD  195 (431)
T ss_pred             HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence            9999997731        1      3689999999988764432 22211   0001         01     0000000


Q ss_pred             -------CCHHHHHHhhc-cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--
Q 015768          150 -------PDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--  218 (400)
Q Consensus       150 -------~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--  218 (400)
                             -+++.+++.+. ....+.+++++..+...|.+ .+.+++++|.++|++||+++|+||++.++...|..+..  
T Consensus       196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~  275 (431)
T TIGR03251       196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ  275 (431)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence                   12344555554 22346888888777777765 68889999999999999999999999977655432111  


Q ss_pred             cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH-H-HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768          219 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-L-KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  296 (400)
Q Consensus       219 ~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l-~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  296 (400)
                      ..-..+++  +++|.+. .   .|++.... ..++.... . ......+++.+++...++.+.|+...+  ....++.++
T Consensus       276 ~gv~PDi~--~~gK~~~-~---~g~~~~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~  346 (431)
T TIGR03251       276 LGVQPDIV--AFGKKTQ-V---CGIMAGRR-VDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE--ERLVDNARV  346 (431)
T ss_pred             cCCCCCEE--EecccCc-c---ceEEecch-HHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHH
Confidence            11123344  4678762 2   25665441 01222211 1 112345677888898888888875211  122333444


Q ss_pred             HHHHHHHHhc----cCC-CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768          297 NREIIREALS----PLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED  370 (400)
Q Consensus       297 ~~~~l~~~L~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~  370 (400)
                      +.+++.+.|+    +.+ .+...... |.++.+.++... ....+...++ ++||++.+..    .+.+||+++. ++++
T Consensus       347 ~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~-~~Gvl~~~~g----~~~lr~~P~l~~t~~  419 (431)
T TIGR03251       347 QGAHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPSTA-DRDEVIRQLY-REGVLLLGCG----ERSIRFRPPLTVTRE  419 (431)
T ss_pred             HHHHHHHHHHHHHHhCccceeccccc-ceeEEEEeCCHH-HHHHHHHHHH-hCCeEEecCC----CCeEEEECCccCCHH
Confidence            4444444443    344 32223344 666667775321 2346777776 8999997742    3679999887 8999


Q ss_pred             HHHHHHHHHHH
Q 015768          371 DCKAAADRLRR  381 (400)
Q Consensus       371 ~~~~~~~~l~~  381 (400)
                      |+++++++|.+
T Consensus       420 eid~~l~~l~~  430 (431)
T TIGR03251       420 EIDAAIDAIRR  430 (431)
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.83  E-value=4.3e-18  Score=151.04  Aligned_cols=338  Identities=15%  Similarity=0.111  Sum_probs=217.3

Q ss_pred             hcCCCeEEcCCCC--CCC-CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGV--VYW-QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~-~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~  100 (400)
                      -+++++|||.++.  ... ...|++.+++.+.+.+-.  .+.|..   . + .-.+++.+.+..+- ..+.|+|++++|+
T Consensus        53 ~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t---~-e-av~l~~~l~~~~~~~~~~rvff~nsGTe  127 (433)
T KOG1401|consen   53 PDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFT---L-E-AVELEEVLSAVLGKGSAERVFFCNSGTE  127 (433)
T ss_pred             CCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCcccc---H-H-HHHHHHHHHhcccCCCccEEEEecCCcH
Confidence            3568899998876  223 368999999998887632  222311   1 1 22333334333321 4789999999999


Q ss_pred             HHHHHHHHhcC------CC--CEEEEeCCCccchh-HHHHhcCcEEEEeccCC---CC---CCCCCHHHHHHhhccCC-C
Q 015768          101 AFVNIVLTLCD------AG--DSVVMFAPYYFNSY-MSFQMTGVTHILVGPCS---SK---TLHPDADWLEKTLETKP-T  164 (400)
Q Consensus       101 a~~~~~~~l~~------~g--d~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~~---~~---~~~~~~e~l~~~l~~~~-~  164 (400)
                      |++.++....+      +-  ..++....+|++-. .++...+...... |.+   ++   .---|...++++++.++ .
T Consensus       128 Ane~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~-~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~  206 (433)
T KOG1401|consen  128 ANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGL-PFDPIAPDVVTAEYNDSTALEKLFESHKGE  206 (433)
T ss_pred             HHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCC-CCCCCCCceeecccCCHHHHHHHHHhCCCc
Confidence            99999998752      11  24888888887744 4444333322222 222   11   11127889999998443 4


Q ss_pred             CeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC----ccccCCCcEEEEeccccccCCCcc
Q 015768          165 PKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK----HCCVEGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~g~~g~  239 (400)
                      +.+|+++..+-..|.+ .+++++..|.++|+++++++|.||++.+|...+..    +....+|    +.++.|.++ .|+
T Consensus       207 IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD----I~t~aK~L~-gGl  281 (433)
T KOG1401|consen  207 IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD----ITTVAKPLG-GGL  281 (433)
T ss_pred             eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc----ceeehhhcc-CCc
Confidence            7888888778778875 58889999999999999999999999987654432    1122233    456789997 889


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhc---cCCcCccHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQD---NIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      ++|..+++   .++.+.+.....   ..+++.|++...++...++.  ..++.+++.+.-...++.+.+.+.+.+.....
T Consensus       282 PigA~~v~---~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g  358 (433)
T KOG1401|consen  282 PIGATGVR---DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICG  358 (433)
T ss_pred             eeEEEeeh---HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceee
Confidence            99999999   677787765444   78899999999999999985  23667777777778888888888876552111


Q ss_pred             CCCCceEEEeeCCCC---CCCHHHHHHHHH-------HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEK---HLDDFEVVRWLA-------HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~-------~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ....+++.-+.+...   ..+.......++       .+.|+++.|-.        -++.. .++|.++.+++.+.+.+.
T Consensus       359 ~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~-~~~E~i~~~l~i~~~~l~  429 (433)
T KOG1401|consen  359 GVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVE-HTPEVIQRLLTILEKVLS  429 (433)
T ss_pred             eeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEeccc--------ccccc-CcHHHHHHHHHHHHHHHH
Confidence            122244443332211   112111111111       12345554411        11222 368999999999999888


Q ss_pred             HHh
Q 015768          385 ELV  387 (400)
Q Consensus       385 ~~~  387 (400)
                      ++.
T Consensus       430 ~~~  432 (433)
T KOG1401|consen  430 ALN  432 (433)
T ss_pred             Hhc
Confidence            764

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.82  E-value=3.8e-17  Score=166.51  Aligned_cols=343  Identities=15%  Similarity=0.092  Sum_probs=222.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeC-ChHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNI  105 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~-g~t~a~~~~  105 (400)
                      +.+|.+++..+-+  ++.+...+...-.-....+|.+   .+|..++..++.+++.+..|.+  ++.+.+ +++++....
T Consensus       499 ~~~i~lGsct~~~--~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~ag  574 (954)
T PRK05367        499 RSMIPLGSCTMKL--NAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAG  574 (954)
T ss_pred             cceeeCCcCCCcC--CHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHH
Confidence            3456666633333  3444443333221122455554   2566788888889999998975  466655 455555444


Q ss_pred             HHHhc----CCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCC
Q 015768          106 VLTLC----DAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNP  176 (400)
Q Consensus       106 ~~~l~----~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~np  176 (400)
                      +.++.    ++|+    +|+++...|.+....++..|++++.+ +.+.+| .+|+++|++.++++ +.+.+|++++|++-
T Consensus       575 L~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v-~~d~~G-~iD~~~L~~~i~~~~~~la~V~it~pst~  652 (954)
T PRK05367        575 LLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVV-ACDENG-NIDLDDLRAKAEEHADNLAAIMITYPSTH  652 (954)
T ss_pred             HHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEE-CCCCCC-CcCHHHHHHHHhccCCCeEEEEEEcCCCC
Confidence            43333    4565    59999999988888899999999999 887665 78999999999753 44688888888876


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHH
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEG  252 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~  252 (400)
                      ++...|   +++|+++|+++|+++++|.++......-.  .....+.+++.+|++|+|+.    +|..+|.+..+   +.
T Consensus       653 G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~l~--~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr---~~  724 (954)
T PRK05367        653 GVFEET---IREICEIVHEHGGQVYLDGANMNAQVGLA--RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVK---AH  724 (954)
T ss_pred             eeecCC---HHHHHHHHHHcCCEEEEECcChhhccCCC--ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeec---cc
Confidence            444578   99999999999999999999964322211  12234678999999999852    34557888877   33


Q ss_pred             HHHHHHHhh-----c---cCCcCccHH----HHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC-
Q 015768          253 FATQLLKVQ-----D---NIPICASII----SQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG-  318 (400)
Q Consensus       253 ~~~~l~~~~-----~---~~~~~~~~~----~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-  318 (400)
                      +...+....     .   ......+..    ....+..++. .|.+.+++..+....+++++.+.|++.-.+.+..+.+ 
T Consensus       725 l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~  804 (954)
T PRK05367        725 LAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGR  804 (954)
T ss_pred             ccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCC
Confidence            333332211     0   001111111    2222222333 2556777888888889999999997743323333211 


Q ss_pred             -ceEEEeeC---CCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          319 -AIYLWARL---PEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       319 -~~~~~~~~---~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       ..=+++++   +.. ..+.+++.++|. ++|+....- .|-.++.+||+++- .+.+|++++++.+++...+..+
T Consensus       805 ~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G~~~~t~-~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~  878 (954)
T PRK05367        805 VAHECILDLRPLKESTGITVDDIAKRLI-DYGFHAPTM-SFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE  878 (954)
T ss_pred             cccceEEEeecccccCCCCHHHHHHHHH-HCCCeEeec-CCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence             11122333   321 235688999885 899987542 23347889999887 8999999999999988887764

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.82  E-value=1.3e-18  Score=144.94  Aligned_cols=166  Identities=23%  Similarity=0.265  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh-HHHHhcCcEEEEeccCCCCCC-
Q 015768           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTL-  148 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~-  148 (400)
                      .++++.+++++    +.+.+++++++|+|+|+..++.++.+++++|+++.++|++.. ..++..|++++.+ +.++++. 
T Consensus         3 ~~~~~~l~~~~----~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~   77 (170)
T cd01494           3 EELEEKLARLL----QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPV-PVDDAGYG   77 (170)
T ss_pred             HHHHHHHHHHc----CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEe-ccCCCCcc
Confidence            45566666665    456789999999999999999999988999999999999998 8888999999988 7765542 


Q ss_pred             CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      ..+.+.+++... ..+++++++++++|++|...+   +++|.++|+++|+++|+|++|..+............+.++++.
T Consensus        78 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~  153 (170)
T cd01494          78 GLDVAILEELKA-KPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTF  153 (170)
T ss_pred             chhhhhhhhccc-cCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEE
Confidence            222224444332 234699999999999999999   6888999999999999999999877654222233456789999


Q ss_pred             ccccccCCCcceeEEEEcc
Q 015768          229 SFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~  247 (400)
                      |++|++|.  .++|+++.+
T Consensus       154 s~~K~~~~--~~~G~l~~~  170 (170)
T cd01494         154 SLHKNLGG--EGGGVVIVK  170 (170)
T ss_pred             EcccccCC--CceEEEEeC
Confidence            99999973  678998753

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.81  E-value=1.7e-17  Score=153.23  Aligned_cols=293  Identities=14%  Similarity=0.058  Sum_probs=206.3

Q ss_pred             CCCCcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccc--hh-HHHHhcCc-EEE
Q 015768           66 ADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFN--SY-MSFQMTGV-THI  138 (400)
Q Consensus        66 ~~~g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~--~~-~~~~~~g~-~~~  138 (400)
                      .++...++.+++.+.|.+.++.+.+  -+++++|+|.+++.++..+. ++|++|++..  +++  +. ++++..|+ ++.
T Consensus        33 Rs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g--~FG~r~~~eia~~~g~~~v~  110 (374)
T TIGR01365        33 RSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE--SFGKGWVTDVTKQLKLPDVR  110 (374)
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC--HHHHHHHHHHHHhcCCCCcE
Confidence            4555677778888888888887533  35668999999999999998 5889998864  444  34 77888998 466


Q ss_pred             EeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc
Q 015768          139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC  218 (400)
Q Consensus       139 ~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~  218 (400)
                      .+ . .+.|..++++.++.    .   +.|++++....||+..|   +.++...+  ++.++|+|.+.+.   ++.+...
T Consensus       111 ~l-~-~~~g~~~~~~~ve~----~---~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVDavSs~---g~~~l~~  173 (374)
T TIGR01365       111 VL-E-AEYGKLPDLKKVDF----K---NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICDATSAA---FAQDLDY  173 (374)
T ss_pred             EE-c-CCCCCCCCHHHcCC----C---CCEEEecCCCchheecc---cccccccc--CCCcEEEEccchh---cCCCCCh
Confidence            66 4 34666778888872    1   33668888889999999   55544322  5899999999883   3444433


Q ss_pred             cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh-----------------------hccCCcCccHHHHHH
Q 015768          219 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-----------------------QDNIPICASIISQHL  275 (400)
Q Consensus       219 ~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~~~  275 (400)
                      .  ..++++.|..|++++|+ .+++++.+   ++..++.+..                       ...+.++++....++
T Consensus       174 d--~iDv~~tgsQK~L~~pp-Gls~v~vs---~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a  247 (374)
T TIGR01365       174 H--KLDVVTFSWQKVLGGEG-AHGMLILS---PRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVED  247 (374)
T ss_pred             h--HCcEEEEechhccCCCC-ceEEEEEC---HHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHH
Confidence            3  37899999999997543 46777777   4554443310                       123456677777777


Q ss_pred             HHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEeeCCCCCC-----C-----HHHHHHH
Q 015768          276 ALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWARLPEKHL-----D-----DFEVVRW  339 (400)
Q Consensus       276 ~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~-----~-----~~~~~~~  339 (400)
                      +..+++..  +..++.+.++++++++.+++.++++++......    .+.....+.++....     +     ..++...
T Consensus       248 ~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~  327 (374)
T TIGR01365       248 WLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELIST  327 (374)
T ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHH
Confidence            77777521  124789999999999999999999984344431    233445566644321     2     4677776


Q ss_pred             HHHhcCeEEeCCCccCCCCeEEEE-eccCCHHHHHHHHHHHHHHHH
Q 015768          340 LAHRHGVVVIPGGACGCRGHLRIS-FGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       340 l~~~~gi~v~~g~~~~~~~~iRi~-~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +. ++||.+.+|.....+..+||+ ++..+.+|++.+++.|.=+.+
T Consensus       328 l~-~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~  372 (374)
T TIGR01365       328 LE-KEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA  372 (374)
T ss_pred             HH-HCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence            64 789999988766556899998 554899999999998876554

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.81  E-value=7.3e-17  Score=152.66  Aligned_cols=316  Identities=15%  Similarity=0.097  Sum_probs=191.8

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCC-cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEG-LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g-~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      +.|+++++++.+.+.......|....+ .....+.+.+.+++..|.+  ..+++++++.|+..++.+ ..+||+|+++..
T Consensus        92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~  168 (454)
T TIGR00474        92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--DALVVNNNAAAVLLALNT-LAKGKEVIVSRG  168 (454)
T ss_pred             CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHH-hCCcCEEEECCC
Confidence            458999999999887643222321101 1112234444444444653  456778888999988855 578999999987


Q ss_pred             Ccc---c---hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC--c--cCCCHHHHHHHHH
Q 015768          122 YYF---N---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--G--TYIPERLLKRISD  191 (400)
Q Consensus       122 ~~~---~---~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt--G--~~~~~~~l~~i~~  191 (400)
                      .|.   +   ..+.++..|++++++ +.+..   .+++++++++++++  ++|++++++|++  |  ...|   +++|++
T Consensus       169 e~v~~ggs~~i~~~~~~~G~~~~~v-~~~~~---~~l~dle~aI~~~T--~lv~~~h~sN~~~~G~~~~~d---l~~I~~  239 (454)
T TIGR00474       169 ELVEIGGSFRIPDVMEQSGAKLVEV-GTTNR---THLKDYEDAITENT--ALLLKVHTSNYRIVGFTEEVS---IAELVA  239 (454)
T ss_pred             hhhhhcchhhHHHHHHHcCCEEEEe-CCCCC---CCHHHHHHhcCcCC--EEEEEEccCcccccCCCCCCC---HHHHHH
Confidence            752   2   234567789999988 55322   37899999998877  999999999985  6  4778   999999


Q ss_pred             HHHHcCCEEEEccccccccc------CCCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          192 LCKAAGSWLVVDNTYEYFMY------DGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~~------~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      +|++||+++++|.+.+.+..      ...+.  .....+.+++++|.+|++|  |...|+++++   ++++++++...-.
T Consensus       240 la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~~i~~l~~~~l~  314 (454)
T TIGR00474       240 LGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIERLKKNPLT  314 (454)
T ss_pred             HHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccC--CCeEEEEEEC---HHHHHhhhhchhH
Confidence            99999999999986543311      11111  2234567899999999996  3358999988   6777665432211


Q ss_pred             CCcCccHHHHHHHHHHh----cCCc--------HHHHHHHHHHHHHHHHHHHHhccC--CCC--cccCCC----Cc----
Q 015768          264 IPICASIISQHLALYSL----QTGP--------EWVTERVKDLVRNREIIREALSPL--GEG--AVKGGE----GA----  319 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l----~~~~--------~~~~~~~~~~~~~~~~l~~~L~~~--~~~--~~~~~~----~~----  319 (400)
                      ...........++...+    ....        +-+....+++++++..+.+.|++.  +..  .+....    +|    
T Consensus       315 r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~  394 (454)
T TIGR00474       315 RALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPD  394 (454)
T ss_pred             HHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcC
Confidence            11122222222222222    2111        112233456677778888878763  221  111110    01    


Q ss_pred             ---eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768          320 ---IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       320 ---~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                         .-..+.+.....+..++..+|. +....|..-   -..+.+.+.+.+..++|++..+++|
T Consensus       395 ~~l~~~~v~~~~~~~~~~~l~~~lr-~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       395 ERLPSYAVTLTPDGLSAEKLEARLR-ELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             CCCCeEEEEEecCCCCHHHHHHHHh-cCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence               1122233222346778887664 555333221   2478888888887788888777765

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.81  E-value=6.1e-18  Score=146.31  Aligned_cols=351  Identities=17%  Similarity=0.188  Sum_probs=243.8

Q ss_pred             chHHHHHHHHHhcC--CCeEEcCCCC--CCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc--C
Q 015768           16 MPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--K   86 (400)
Q Consensus        16 ~~~~~~~~~~~~~~--~~~i~~~~~~--~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~--~   86 (400)
                      ....--...+|..+  +..++++.|.  -+.+   .-+.|.+|-.+.........|-+..|.+++.+..++......  -
T Consensus        36 pDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~  115 (427)
T KOG1411|consen   36 PDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPV  115 (427)
T ss_pred             CCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchh
Confidence            33344455566555  4477887764  2222   235666666655554445578899999999999999864221  1


Q ss_pred             CCCCcEEEe--CChHHHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768           87 LYKSSVMVT--AGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus        87 ~~~~~i~~~--~g~t~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      ++.++++.+  -++|.|+.....-+.  -++..|.++.|+|.++..+++..|+.+..++.-++....+|.+-+.+.+...
T Consensus       116 ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~  195 (427)
T KOG1411|consen  116 IKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA  195 (427)
T ss_pred             hhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC
Confidence            234566554  456777777666654  4688999999999999999999999887774455555566777766666644


Q ss_pred             CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-------ccCCCcEEEEecccccc
Q 015768          163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-------CVEGDHVVNLFSFSKAY  234 (400)
Q Consensus       163 ~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-------~~~~~~~i~~~s~sK~~  234 (400)
                      +.-..|++- ..|||||+-...|.+++|.++.++.+.+-+.|.+|.+|..+.....       ...+...++.-|++|.+
T Consensus       196 p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM  275 (427)
T KOG1411|consen  196 PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM  275 (427)
T ss_pred             CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc
Confidence            423444444 3599999999999999999999999999999999998887643221       12356678899999999


Q ss_pred             CCCcceeEEE--EccCCcHHHHHHHH----HhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHHHHHHH
Q 015768          235 GMMGWRVGYI--AYPSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIR  302 (400)
Q Consensus       235 g~~g~~~G~i--~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~  302 (400)
                      |+-|-|+|.+  ++.+  .+...+++    ...+.-..+++......+...|.+..   +|   .+-+..++...+..|.
T Consensus       276 GLYgERvGa~svvc~~--ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~  353 (427)
T KOG1411|consen  276 GLYGERVGALSVVCKD--ADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLF  353 (427)
T ss_pred             chhhhccceeEEEecC--HHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHh
Confidence            9999999984  4554  45444443    34444455667777777777777522   34   4556788888899999


Q ss_pred             HHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768          303 EALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       303 ~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      +.|+..+.   ...+..+.|+|.+-.+.      .+.+++|.+++.|+...-.        |||++..+...+..+.+++
T Consensus       354 d~L~~~gs~~~W~hI~~QIGMF~fTgl~------peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~ai  419 (427)
T KOG1411|consen  354 DALEKEGSPGNWSHITKQIGMFCFTGLN------PEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAI  419 (427)
T ss_pred             HHhhcCCCCccHHHHHHhhheeeecCCC------HHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhh
Confidence            99998654   22344556899987775      3567788889999987433        8998886666555555555


Q ss_pred             HHH
Q 015768          380 RRG  382 (400)
Q Consensus       380 ~~~  382 (400)
                      .++
T Consensus       420 h~v  422 (427)
T KOG1411|consen  420 HAV  422 (427)
T ss_pred             HhH
Confidence            443

>PRK15029 arginine decarboxylase; Provisional

Probab=99.81  E-value=2.8e-16  Score=155.28  Aligned_cols=230  Identities=13%  Similarity=0.064  Sum_probs=150.1

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC--C
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--L  148 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~  148 (400)
                      ....+..+..++.+|.+ ...++++|+|.++..++.+++++||+|++...||-++..++...|+.++++.|.. +.|  .
T Consensus       205 G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~  283 (755)
T PRK15029        205 GAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIG  283 (755)
T ss_pred             cHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence            34445555555556753 5678899999999999999999999999999999999999999999999984443 222  1


Q ss_pred             CCC-----HHHHHHhhccCCCCe--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCC-
Q 015768          149 HPD-----ADWLEKTLETKPTPK--------LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDG-  213 (400)
Q Consensus       149 ~~~-----~e~l~~~l~~~~~~~--------~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~-  213 (400)
                      .++     .+.+++.++..+..+        ++++++|+. .|.+.+   +++|+++|+++++++++||||+... +.. 
T Consensus       284 ~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~  359 (755)
T PRK15029        284 PIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPI  359 (755)
T ss_pred             CCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCcc
Confidence            234     889999987443334        899998865 799999   9999999999999999999997433 322 


Q ss_pred             CC-cccc-----C-CCcE-EEEeccccccCCCcceeE-EEEccCCcHHH-HHHHHHhhc-cCCcCccHHHHHHHHHHhcC
Q 015768          214 RK-HCCV-----E-GDHV-VNLFSFSKAYGMMGWRVG-YIAYPSEVEGF-ATQLLKVQD-NIPICASIISQHLALYSLQT  282 (400)
Q Consensus       214 ~~-~~~~-----~-~~~~-i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~-~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~  282 (400)
                      .+ ....     . .+.+ +++-|.||.+  +++..| ++..+++...+ .++++.... ..+.+++.+....+..+-..
T Consensus       360 ~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~  437 (755)
T PRK15029        360 YADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSM  437 (755)
T ss_pred             ccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence            11 1222     1 3444 8899999998  455544 45443320001 234443332 23445555444433333322


Q ss_pred             CcH-HHHHHHHHHHHHHHHHHHHhccC
Q 015768          283 GPE-WVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       283 ~~~-~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      .+. ...+..++..+....+++.+.++
T Consensus       438 m~~~~G~~l~~~~i~~~~~~r~~l~~~  464 (755)
T PRK15029        438 MDGNSGLSLTQEVIDEAVDFRQAMARL  464 (755)
T ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence            111 23344455555555566555443

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.81  E-value=6.3e-18  Score=155.91  Aligned_cols=235  Identities=13%  Similarity=0.150  Sum_probs=147.7

Q ss_pred             HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-C--CC
Q 015768           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-T--LH  149 (400)
Q Consensus        73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~--~~  149 (400)
                      ...+..+..++.+|. .+..++++|+|.++.+++.++++|||+|+++..||-++..++...|+.++++.|.+.. |  ..
T Consensus        67 ~I~eAe~~aA~~fGA-d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~  145 (417)
T PF01276_consen   67 IIKEAEELAARAFGA-DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGG  145 (417)
T ss_dssp             HHHHHHHHHHHHHTE-SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEE
T ss_pred             HHHHHHHHHHHhcCC-CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccC
Confidence            334444445555574 3557778999999999999999999999999999999999999999999999555222 2  13


Q ss_pred             CCH-----HHHHHhhccCCCCeE---EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCCCccccC
Q 015768          150 PDA-----DWLEKTLETKPTPKL---VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVE  220 (400)
Q Consensus       150 ~~~-----e~l~~~l~~~~~~~~---v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~  220 (400)
                      ++.     +.+++.++..+..|+   ++|++|+. .|.+.+   +++|+++|++++++|++||||+... +...+.....
T Consensus       146 i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~  221 (417)
T PF01276_consen  146 ISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA  221 (417)
T ss_dssp             B-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred             CChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence            455     899999985554455   99998865 799999   9999999999999999999997432 3321222222


Q ss_pred             CC-------cEEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCC-cHHHHHH
Q 015768          221 GD-------HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTG-PEWVTER  290 (400)
Q Consensus       221 ~~-------~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~-~~~~~~~  290 (400)
                      .+       .++++.|.||.++  ++. .+++..+++..--.++++.... ..+.+++.+....+..+.... ....++.
T Consensus       222 ~gad~~~~~~~~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l  299 (417)
T PF01276_consen  222 LGADRPNDPGIIVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGREL  299 (417)
T ss_dssp             TTSS-CTSBEEEEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHH
T ss_pred             ccCccccccceeeeechhhccc--ccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHH
Confidence            23       3499999999984  544 4566555421012344443222 235566655555444443322 2334556


Q ss_pred             HHHHHHHHHHHHHHh---ccCCCCccc
Q 015768          291 VKDLVRNREIIREAL---SPLGEGAVK  314 (400)
Q Consensus       291 ~~~~~~~~~~l~~~L---~~~~~~~~~  314 (400)
                      .++..++...+++.+   +++.++++.
T Consensus       300 ~~~~i~~a~~~R~~i~~~~~~~~~~~~  326 (417)
T PF01276_consen  300 LEEAIELAEEFRKKINRLNDIWGFKVL  326 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEecC
Confidence            666666667777766   555444433

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.80  E-value=1.2e-16  Score=159.16  Aligned_cols=340  Identities=12%  Similarity=0.089  Sum_probs=219.6

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeC-ChHHHHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNIV  106 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~-g~t~a~~~~~  106 (400)
                      .++.+++..+-+++-...+.+-...+..  ..+|.+   .+|..++..++.+++.+..|.+.  +-+.+ +++.+....+
T Consensus       501 ~~~~LGsCTmK~n~~~~~~p~s~~eF~t--~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~--~Sl~p~sGA~gE~A~L  576 (954)
T PRK12566        501 SMIPLGSCTMKLNATSEMIPITWPEFAQ--LHPFAPREQAEGYRAMIDELEAWLCAITGFDA--ICMQPNSGAQGEYAGL  576 (954)
T ss_pred             CcccCcccccCcCcHHhhhcccchhhhc--CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCe--EeecCCchHHHHHHHH
Confidence            3466666444443333333222222222  466777   68888899999999998888653  34444 5666665666


Q ss_pred             HHhcC-------C-CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCC
Q 015768          107 LTLCD-------A-GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPS  177 (400)
Q Consensus       107 ~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~npt  177 (400)
                      .++..       + .++|+++.-.|......+...|++++.+ |.+++| .+|+++|++.++ .++..++|.+++|++-+
T Consensus       577 mair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~V-p~D~~G-~iDle~L~a~I~~~~~~laaVmiT~Pnt~G  654 (954)
T PRK12566        577 LAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIV-ECDPDG-NVDLDDLKAKAAAAGDRLSCLMITYPSTHG  654 (954)
T ss_pred             HHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEe-ccCCCC-CcCHHHHHHHhhccCCCEEEEEEEecCcCc
Confidence            66542       3 3678899988866666678889999999 888766 789999999997 33445788888888766


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGF  253 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~~  253 (400)
                      +...+   +++|+++|+++|+++++|.++..... +. ......+.++++++++|+++.    +|..+|.+..+   +.+
T Consensus       655 v~e~~---V~eI~~iah~~Galv~vDgA~~~a~~-~l-~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~---~~L  726 (954)
T PRK12566        655 VYEEG---IREICEVVHQHGGQVYMDGANLNAQV-GL-ARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVR---AHL  726 (954)
T ss_pred             eecch---HHHHHHHHHHcCCEEEEEeeChhhcc-CC-CChhhcCCCEEEecCCcccCcCccCCCCccchhhhh---hhh
Confidence            55455   99999999999999999999863221 11 112345788999999999952    24445665555   333


Q ss_pred             HHHHHHhh----------ccC---CcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          254 ATQLLKVQ----------DNI---PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       254 ~~~l~~~~----------~~~---~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      ...+....          ...   ....+.....++..++.. |.+ +.+.......+++++++.|.+...+.+.++.+.
T Consensus       727 ~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~  805 (954)
T PRK12566        727 APFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNER  805 (954)
T ss_pred             hhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCC
Confidence            33333221          000   111222223333444443 444 555555567788999999977433334322212


Q ss_pred             --eEEEeeCC---C-CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          320 --IYLWARLP---E-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       320 --~~~~~~~~---~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                        .-+.+++.   . ...+..++..+|+ ++||.... ..|-.++.+|++++- .+.+|+|++++.|++..++..
T Consensus       806 ~~hEfii~~~~l~~~~g~~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~  878 (954)
T PRK12566        806 VAHECILDLRPLKAQTGISEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG  878 (954)
T ss_pred             eeeEEEEEccccccccCCCHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence              11223332   2 1246678999998 89998644 334357899999987 899999999999999988865

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.80  E-value=5e-17  Score=153.63  Aligned_cols=296  Identities=17%  Similarity=0.163  Sum_probs=210.5

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCC--------C
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDA--------G  113 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~--------g  113 (400)
                      .+++.+.+.+...+.++ ....+..++...+.+.+..++++.++.+ .-.-.+|+|+|+++..++.+....        +
T Consensus        73 ~~~~~a~~~~~~~~~~n-l~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~  151 (460)
T COG0076          73 RVPPVAAELLVSALNKN-LGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES  151 (460)
T ss_pred             CCHHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence            35677777788887775 3434345578899999999999999874 456799999999999888876311        1


Q ss_pred             ------CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          114 ------DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       114 ------d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                            .+|+++.-.|+++...++.+|+....+ |.++..+.+|++++++.+.+.+...+|+-+.++.++|.+-|   ++
T Consensus       152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v-~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~  227 (460)
T COG0076         152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRV-PTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IE  227 (460)
T ss_pred             cccCCCCeEEecCcchhHHHHHHHHhCCCceeE-EeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HH
Confidence                  179999999999999999999988888 77765568999999999997763333666678999999999   99


Q ss_pred             HHHHHHHHcCCEEEEcccccccccC--CCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcH-HHHHHHHHhhc
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYD--GRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQLLKVQD  262 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~-~~~~~l~~~~~  262 (400)
                      +|.++|+++++|++||.|++++..-  .....  ..-...+-+..++||+. .....+||++.++  + .+.+.+.....
T Consensus       228 ~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g-~aP~~~G~il~rd--~e~l~~~~~~~~~  304 (460)
T COG0076         228 ELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYG-LAPIGCGVVLFRD--EEALRRILIFADY  304 (460)
T ss_pred             HHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccccc-CCCCCceEEEEEC--HHHhhhhhhcccc
Confidence            9999999999999999999977742  21122  11234556677999987 4778899999997  5 34444432111


Q ss_pred             cCC--------c--Cc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768          263 NIP--------I--CA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  329 (400)
Q Consensus       263 ~~~--------~--~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  329 (400)
                      ..+        .  +-   ..+.+++....+  +.+.+.++.++..++++++.+.|++.+.+.+..+...+.+.++.++.
T Consensus       305 yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l--G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~  382 (460)
T COG0076         305 YLPGGGIPNFTILGSRPGRQALALYANLRRL--GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDD  382 (460)
T ss_pred             cCCCCCcCceeEeeccchHHHHHHHHHHHHh--CHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCc
Confidence            111        0  11   223333333333  45778899999999999999999999865666544588888888653


Q ss_pred             CCCHHHHHHHHHHhcCeEEe
Q 015768          330 HLDDFEVVRWLAHRHGVVVI  349 (400)
Q Consensus       330 ~~~~~~~~~~l~~~~gi~v~  349 (400)
                      .....+...++ ++.|..+.
T Consensus       383 ~~~~~~~~~~~-~~~gw~v~  401 (460)
T COG0076         383 EDTLADLSERL-DRRGWQVP  401 (460)
T ss_pred             ccchhchHHHH-HhcCceee
Confidence            21022333333 34565553

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.80  E-value=5.2e-17  Score=154.60  Aligned_cols=330  Identities=16%  Similarity=0.131  Sum_probs=195.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+..  .+..   ....+-++++.+.+... ..+.++|+++|++|++
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~--~~~~---~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e  118 (431)
T PRK06209         45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC--NFTR---PSAIELDAAESFLELID-GADMVKFCKNGSDATS  118 (431)
T ss_pred             CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc--CCCC---CCHHHHHHHHHHHHhCC-ccceEEEecCHHHHHH
Confidence            5678899998775  4444 78999999999998743  2321   12233345555554432 1368999999999999


Q ss_pred             HHHHHhcC-CC-CEEEEe-CCCccchhHHHH-----hcCcE--E--EEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEE
Q 015768          104 NIVLTLCD-AG-DSVVMF-APYYFNSYMSFQ-----MTGVT--H--ILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSV  170 (400)
Q Consensus       104 ~~~~~l~~-~g-d~vlv~-~p~~~~~~~~~~-----~~g~~--~--~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l  170 (400)
                      .+++.... .| .+|+.. ..+|++......     ..|..  .  ..+ ...    .-|++++++.+... ..+++|++
T Consensus       119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~-~~~----~~d~~~l~~~l~~~~~~~aavi~  193 (431)
T PRK06209        119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV-TFR----YNDIASLEALFEDHPGRIACVIL  193 (431)
T ss_pred             HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc-ccC----CCCHHHHHHHHHhCCCCEEEEEE
Confidence            99997642 23 456555 344433221110     00110  0  001 111    12788999888632 23566666


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  250 (400)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~  250 (400)
                      +..   .|...+.+.+++|.++|++||+++|+||++.++...+..... ..+...-+.+++|.+| .|+.+|+++++   
T Consensus       194 Epv---~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~-~~gv~PDi~t~gK~lg-gG~p~~av~~~---  265 (431)
T PRK06209        194 EPA---TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK-LYGIVPDLSCFGKALG-NGFAVSALAGK---  265 (431)
T ss_pred             ccc---cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH-HhCCCcceeeehhhhc-CCcccEEEEEH---
Confidence            533   344778999999999999999999999999766432111100 0111122457799998 67889999998   


Q ss_pred             HHHHHH--HHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCcccCCCC
Q 015768          251 EGFATQ--LLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGAVKGGEG  318 (400)
Q Consensus       251 ~~~~~~--l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~  318 (400)
                      +++.+.  +..      +....+++++++...++.+.|+..++  ....++..++.+++++.|+    +++....+...+
T Consensus       266 ~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G  343 (431)
T PRK06209        266 REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD--EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSG  343 (431)
T ss_pred             HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeec
Confidence            677665  211      11345677788888888888774221  1234444444455554444    344422122222


Q ss_pred             ceEEEeeC--CCCCCC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          319 AIYLWARL--PEKHLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       319 ~~~~~~~~--~~~~~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .+..+.-+  ......    ...+...++ ++||.+.|         ++++.. +|++++++++++|.+++.++.+
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~p~---------l~is~~-ht~~dId~~l~~l~~~l~~~~~  408 (431)
T PRK06209        344 RPCCLTYSTLDGNGQPSQAFRTLFLQETI-RRGVLMPS---------LVVSYA-HGDADIERTIDAVHGALGVYRK  408 (431)
T ss_pred             ceEEEEEecCCcccCCcHHHHHHHHHHHH-HCCccccc---------cccccc-CCHHHHHHHHHHHHHHHHHHHH
Confidence            22222111  111111    124556665 78997622         466644 5999999999999999998843

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.80  E-value=1.6e-16  Score=159.31  Aligned_cols=341  Identities=12%  Similarity=0.045  Sum_probs=213.2

Q ss_pred             CeEEcCCCC--CCCC--CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHH
Q 015768           31 NAVSLAQGV--VYWQ--PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI  105 (400)
Q Consensus        31 ~~i~~~~~~--~~~~--~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~  105 (400)
                      .++|+..+.  ..++  .+|++.+++.+.+.+...... . .-..+-..++++.|.+..+-+ .+.++|+++|++|++.+
T Consensus       366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~-~-~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~A  443 (817)
T PLN02974        366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMF-P-ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVA  443 (817)
T ss_pred             eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcccc-C-ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHH
Confidence            678887764  3444  489999999999887421111 1 112344556777776532211 36899999999999999


Q ss_pred             HHHhcC---------------------CCCEEEEeCCCccchhHHHHhcCc---------EE------EEec-cCC----
Q 015768          106 VLTLCD---------------------AGDSVVMFAPYYFNSYMSFQMTGV---------TH------ILVG-PCS----  144 (400)
Q Consensus       106 ~~~l~~---------------------~gd~vlv~~p~~~~~~~~~~~~g~---------~~------~~~~-~~~----  144 (400)
                      ++...+                     ...+|+....+|++........+.         ..      ..+. |..    
T Consensus       444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~  523 (817)
T PLN02974        444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN  523 (817)
T ss_pred             HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence            987621                     124699999999885533322211         00      0110 100    


Q ss_pred             -------CCC-----------CC-----C------------CHHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-C
Q 015768          145 -------SKT-----------LH-----P------------DADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-I  181 (400)
Q Consensus       145 -------~~~-----------~~-----~------------~~e~l~~~l~~------~~~~~~v~l~~p-~nptG~~-~  181 (400)
                             +.+           |.     .            .++.+++.|..      ...+.+++++.. +...|++ +
T Consensus       524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~  603 (817)
T PLN02974        524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLI  603 (817)
T ss_pred             ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccC
Confidence                   000           00     0            02456666642      233677887753 6767875 5


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-  259 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-  259 (400)
                      +.++++++.++|++||+++|.||++.+|...|..+.....+...-+-.++|.++ +| +++|.++.+   +++.+.+.. 
T Consensus       604 ~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLt-gG~~Plaa~l~~---~~I~~~f~~~  679 (817)
T PLN02974        604 DPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLT-GGLVPLAATLAT---EEVFEAFRGP  679 (817)
T ss_pred             CHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeeccccc-CCCCccEEEEEc---HHHHHhhccc
Confidence            788999999999999999999999998876554332222222222445689997 78 699999998   788877742 


Q ss_pred             -----hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHH----HHhccCCCCcccCCCCceEEEeeCCC
Q 015768          260 -----VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIR----EALSPLGEGAVKGGEGAIYLWARLPE  328 (400)
Q Consensus       260 -----~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~----~~L~~~~~~~~~~~~~~~~~~~~~~~  328 (400)
                           +.+..+++.++++..++.+.|+..+  +...+..+...+..+.+.    +.|++++.+.-+... |.+.-+.+..
T Consensus       680 ~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~-Gl~~~iel~~  758 (817)
T PLN02974        680 SKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL-GTVLALELDA  758 (817)
T ss_pred             cccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee-eeEEEEEEec
Confidence                 2356789999999999998887522  222333444444444444    344455543334444 5666666542


Q ss_pred             CCC-------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          329 KHL-------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       329 ~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      ...       ....+...++.++||++++.     .+.+|+.... ++++++++++++|.+.+
T Consensus       759 ~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        759 EGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             CCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            110       12345555543799999873     3688886555 89999999999998876

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.80  E-value=1.5e-17  Score=143.14  Aligned_cols=334  Identities=13%  Similarity=0.135  Sum_probs=228.6

Q ss_pred             cCCCeEEcCCCCCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      .|+.++||=++.+..   .-+|.+++++.+..++-...+   ..-...+.-+.++++.+.+|  .+.++-++.+.+|.+.
T Consensus        57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlss---rafYnd~~~~f~~~vt~lf~--~~kvlpmnTGaEa~Et  131 (427)
T KOG1402|consen   57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSS---RAFYNDVLGEFAEYVTKLFG--YDKVLPMNTGAEAVET  131 (427)
T ss_pred             CccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhh---HHHhhhhHHHHHHHHHHhcC--cceeeecccchhHHHH
Confidence            457788886665333   368999999999888632221   12234556677777777766  4667778888999999


Q ss_pred             HHHHhc------C--CCC--EEEEeCCCccchhHHHHhcCcEEE-------EeccCCCC--CCCCCHHHHHHhhccCCCC
Q 015768          105 IVLTLC------D--AGD--SVVMFAPYYFNSYMSFQMTGVTHI-------LVGPCSSK--TLHPDADWLEKTLETKPTP  165 (400)
Q Consensus       105 ~~~~l~------~--~gd--~vlv~~p~~~~~~~~~~~~g~~~~-------~~~~~~~~--~~~~~~e~l~~~l~~~~~~  165 (400)
                      ++...+      +  |.+  .|+....+|++-...+-.++.+.-       ++ |.+.+  .+. |+++|+..++... .
T Consensus       132 a~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~-P~~~~~v~Y~-d~eale~~l~~~~-v  208 (427)
T KOG1402|consen  132 ACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFL-PGVVDKVPYG-DAEALEVALKSPN-V  208 (427)
T ss_pred             HHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCC-CCcceeeccC-CHHHHHHHhcCCC-e
Confidence            998765      2  322  344445555442211111111110       00 11000  111 7899999998643 5


Q ss_pred             eEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC---CcEEEEeccccccCCCc-ce
Q 015768          166 KLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLFSFSKAYGMMG-WR  240 (400)
Q Consensus       166 ~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~g-~~  240 (400)
                      ++.+++..+...|++ +|+..+.+..++|++||+++|.||++.++...|.-. ..++   ..++++  +.|+++ +| .+
T Consensus       209 aaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l-a~d~env~PDivi--lgKalS-GG~~P  284 (427)
T KOG1402|consen  209 AAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL-ACDYENVRPDIVI--LGKALS-GGVYP  284 (427)
T ss_pred             eEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE-EeehhhcCCCeEE--Eecccc-CCeee
Confidence            677766668889975 677799999999999999999999999887766322 2221   122332  359997 44 57


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-----CcccC
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-----GAVKG  315 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~  315 (400)
                      ++.++++   +++.-.++...+..+++.|+++..++.++|+.-.  -++..++..++.+.|++.|.+++.     ++.++
T Consensus       285 vsavl~~---~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~--eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VR  359 (427)
T KOG1402|consen  285 VSAVLAD---DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--EEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVR  359 (427)
T ss_pred             eEEEEec---HHHHhccCCCccccccCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccccchhheee
Confidence            8888888   6777778887888899999999999999998522  256777888888999999988754     23444


Q ss_pred             CCCceEEEeeCC---CCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       316 ~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      .. |++.-+.+.   ....+..+++-.+ +++|++..|-.    .+-|||.+.. ++++|++++++.+.+++.
T Consensus       360 Gr-Gl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~  426 (427)
T KOG1402|consen  360 GR-GLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKTIA  426 (427)
T ss_pred             cc-ceEEEEEeccccccchhHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence            55 666655554   2334667777766 58999988743    6799999887 899999999999998874

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.79  E-value=3.3e-18  Score=149.41  Aligned_cols=283  Identities=21%  Similarity=0.250  Sum_probs=177.1

Q ss_pred             HHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCC------CCEEEEeCCCccchhHHHHhcCcEEEEecc
Q 015768           71 PELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDA------GDSVVMFAPYYFNSYMSFQMTGVTHILVGP  142 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~  142 (400)
                      ++|.+.|.+.-....+.  +...|++.+|+|+.++.++.+|...      --.|+...|.|+.+.............+ .
T Consensus        46 ~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w-~  124 (363)
T PF04864_consen   46 PELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW-A  124 (363)
T ss_dssp             HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE-E
T ss_pred             HHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc-c
Confidence            45555555544444443  4678999999999999999999632      1379999999998887654433222222 1


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD  222 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  222 (400)
                      -|...|. +        +..+.+-.=+++.||||.|.+-     +.++   +..+..+|.|-||.+-.+.....   ..+
T Consensus       125 Gda~~~~-~--------~~~~~~~IElVTSPNNPDG~lr-----~~V~---~g~~~k~I~D~AYYWPhyTpI~~---~aD  184 (363)
T PF04864_consen  125 GDASNFK-N--------SDNPSPYIELVTSPNNPDGQLR-----EAVL---NGSSGKVIHDLAYYWPHYTPITA---PAD  184 (363)
T ss_dssp             EECCCGT-T---------S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS---S----B-
T ss_pred             ccHHhhc-c--------CCCCCCeEEEEeCCCCCccccc-----chhc---CCCCcceeeeeeeecccccccCC---CCC
Confidence            2222221 0        0111123447789999999863     2222   34567789999999876654332   246


Q ss_pred             cEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC----Cc------HHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT----GP------EWVTERVK  292 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~------~~~~~~~~  292 (400)
                      .++.++|+||.-|.+|.|+||.+.+|  +++.+++..+....+.+++.=+|.-++..|..    ..      +.+.--.+
T Consensus       185 ~DiMLFT~SK~TGHAGSR~GWAlVKD--~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~  262 (363)
T PF04864_consen  185 HDIMLFTLSKLTGHAGSRFGWALVKD--EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYS  262 (363)
T ss_dssp             -SEEEEEHHHHCS-GGG-EEEEEES---HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHH
T ss_pred             CceEEEEEecccCccccccceeeecC--HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHH
Confidence            67999999999999999999999888  89999999988888899998888888777764    11      23444445


Q ss_pred             HHHHHHHHHHHHhccCCC--------------CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-CC
Q 015768          293 DLVRNREIIREALSPLGE--------------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-CR  357 (400)
Q Consensus       293 ~~~~~~~~l~~~L~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~  357 (400)
                      .++++..+|++.+..-..              .++..| +..|.|+++...   .++=|...+++.||..+.|..|+ .+
T Consensus       263 ~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~p-sPafAWlkCe~e---ed~DC~~~l~~~~I~tr~G~~fga~~  338 (363)
T PF04864_consen  263 TMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREP-SPAFAWLKCERE---EDEDCYAVLREAKIITRSGVLFGADS  338 (363)
T ss_dssp             HHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE----SEEEEEESSC---GGSSHHHHHHCTTEEEEEGGGGTS-T
T ss_pred             HHHHHHHHHHHHHHhcCceecCcCCchhccccccccCC-CCCeEEEecCCc---ccccHHHHHHhCCcccCCCCccCCCC
Confidence            566677778777774321              122223 378999999853   22234445569999999999998 57


Q ss_pred             CeEEEEeccCCHHHHHHHHHHHHH
Q 015768          358 GHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       358 ~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .++|+|+-. ++++++.++++|.+
T Consensus       339 ryVRlSml~-~~d~Fd~l~~rL~~  361 (363)
T PF04864_consen  339 RYVRLSMLK-RDDDFDQLLERLSK  361 (363)
T ss_dssp             TEEEEESSS--HHHHHHHHHHHHC
T ss_pred             CeEEEeccC-CHHHHHHHHHHHHh
Confidence            899999986 89999999999975

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.77  E-value=1.8e-15  Score=151.79  Aligned_cols=315  Identities=15%  Similarity=0.073  Sum_probs=209.3

Q ss_pred             CCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEEeCCCccchhHH
Q 015768           61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD--------AGDSVVMFAPYYFNSYMS  129 (400)
Q Consensus        61 ~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~--------~gd~vlv~~p~~~~~~~~  129 (400)
                      ..+|.|.   +|..++..++.+|+.+..|.+. .-+..+++++|....+.++..        ..++|+++...|......
T Consensus       516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas  594 (939)
T TIGR00461       516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFDA-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS  594 (939)
T ss_pred             cCCCCchHHhHHHHHHHHHHHHHHHHHHCCCC-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH
Confidence            5566543   5677888999999999999873 334445566666555555432        236799999999888888


Q ss_pred             HHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 015768          130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY  208 (400)
Q Consensus       130 ~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~  208 (400)
                      ++..|++++.+ |.+++| .+|+++|++.+++ ...+++|++++|+| +|.+.+.  +++|+++|+++|.++++|.++..
T Consensus       595 a~~~G~~Vv~V-~~d~~G-~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~--I~eI~~iah~~G~~v~VDgAq~~  669 (939)
T TIGR00461       595 AAMAGMQVVPV-NCDQDG-NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT--IQHACDIVHSFGGQVYLDGANMN  669 (939)
T ss_pred             HHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc--HHHHHHHHHHcCCEEEEEecChh
Confidence            88999999999 887665 7899999999974 23358999999999 6776432  89999999999999999999864


Q ss_pred             cccCCCCccccCCCcEEEEeccccccC----CCcceeEEEEccCCcHHHHHHHHHh---------------hccCC-cCc
Q 015768          209 FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKV---------------QDNIP-ICA  268 (400)
Q Consensus       209 ~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~G~i~~~~~~~~~~~~l~~~---------------~~~~~-~~~  268 (400)
                      ....  .......+.|++++|.+|+|+    .+|..+|.+.++   +.+...+...               ....+ ...
T Consensus       670 al~~--l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr---~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g  744 (939)
T TIGR00461       670 AQVG--LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---SHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYG  744 (939)
T ss_pred             hCCC--CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEh---hhchhhcCCCcccccccCCCCccccccccccccC
Confidence            2211  112234578899999999774    345668999988   3443333210               00001 112


Q ss_pred             cHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc--eEEEeeCCC----CCCCHHHHHHHHH
Q 015768          269 SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA--IYLWARLPE----KHLDDFEVVRWLA  341 (400)
Q Consensus       269 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~l~  341 (400)
                      +......+..++.. |.+.+++..+....+++++.+.|++...+...++.+.  .=+.++++.    ...+..++..+|+
T Consensus       745 ~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~  824 (939)
T TIGR00461       745 SASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQ  824 (939)
T ss_pred             cHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHH
Confidence            22222333333332 5577888888899999999999987432122211111  114455552    1246788999997


Q ss_pred             HhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          342 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       ++|+.... ..|-..+.+-|.++- .+.+|+|++++.+.+.-++..+
T Consensus       825 -d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~  870 (939)
T TIGR00461       825 -DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA  870 (939)
T ss_pred             -hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence             89998533 223233444444443 6999999999999888777654

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PLN02452 phosphoserine transaminase

Probab=99.77  E-value=8e-16  Score=142.18  Aligned_cols=325  Identities=13%  Similarity=0.124  Sum_probs=216.3

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCC-----C-CCCCCCCCcHHHHHHHHHHHHhhcCCCCC-c-EEEeCChHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS-----I-SKYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFV  103 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-----~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~-i~~~~g~t~a~~  103 (400)
                      .++|+.|  +...|++|++++.+.+.+..     . .....+....++.+.+.+.+.+.++++.+ + +++..|+|.+++
T Consensus         8 ~~~f~pG--P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e   85 (365)
T PLN02452          8 VFNFSAG--PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA   85 (365)
T ss_pred             eEeeeCC--CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence            4566655  23467999999988764311     1 11113444567888888888888887532 4 455688999999


Q ss_pred             HHHHHhcCCCCEEEEeCCCccc--hhHHHHhcCcEEEEec-cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVG-PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~-~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~  180 (400)
                      .+...+..+|+++++...++++  +.+.++..|...+... +.......++++++    +..+..+.|.+++....||+.
T Consensus        86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~hnETstGv~  161 (365)
T PLN02452         86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTPDAKFVHICANETIHGVE  161 (365)
T ss_pred             HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCCCCcEEEECCCCCCCcEe
Confidence            9999999999999888877766  4467777886433321 11111123455554    323346889999888899995


Q ss_pred             -CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          181 -IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       181 -~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                       .+   +.++.      ++++++|.+.+.+   +.+......+  +...|.+|.+|.+|  +|.++.+   +++.+++..
T Consensus       162 ~~~---~~~i~------~~~lvVDa~Ss~g---~~pidv~~~~--v~~~saqK~lGP~G--l~~v~vr---~~~l~~~~~  222 (365)
T PLN02452        162 FKD---YPDVG------NVPLVADMSSNFL---SKPVDVSKYG--VIYAGAQKNVGPSG--VTIVIIR---KDLIGNARP  222 (365)
T ss_pred             cCc---ccccC------CCeEEEECCcccc---CcccCHHHcC--EEEEecccccCCCC--eEEEEEc---HHHHhhccc
Confidence             65   44443      3899999998843   3344343344  34469999998777  6888888   666655432


Q ss_pred             hh------------ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-cc-cCC--CCceE
Q 015768          260 VQ------------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AV-KGG--EGAIY  321 (400)
Q Consensus       260 ~~------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~-~~~--~~~~~  321 (400)
                      ..            ....++++....+++..+|+.-.+  .++.+.++.+++++.+++.|++..++ .. ..+  .+.+.
T Consensus       223 ~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~  302 (365)
T PLN02452        223 ITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMN  302 (365)
T ss_pred             CCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeE
Confidence            11            122357888888888888874222  47888899999999999999986432 11 111  24566


Q ss_pred             EEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          322 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      +.+.++... ..+++...+ +++|+...+|..-.  +.+|+|+-. ++.++++.+++.++++-++
T Consensus       303 vsF~~~~~~-~~~~f~~~~-~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m~~f~~~  363 (365)
T PLN02452        303 VPFTLGGSE-LEAEFVKEA-AKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKDFQAK  363 (365)
T ss_pred             EEEEcCCch-hHHHHHHHH-HHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            777777643 456677665 69999999987432  349999665 8888877777776666543

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.77  E-value=4.5e-16  Score=137.27  Aligned_cols=337  Identities=15%  Similarity=0.128  Sum_probs=218.3

Q ss_pred             hcCCCeEEcCCCCC--CC-CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768           27 RGAKNAVSLAQGVV--YW-QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (400)
Q Consensus        27 ~~~~~~i~~~~~~~--~~-~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a  101 (400)
                      ++|+.+.|+-.|..  .. .-+|++.+++.+.+..-.  ...|.. .-..++.++++..+    --+-+.++|++++++|
T Consensus        47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~----P~~l~~vfF~nsGsEA  121 (442)
T KOG1404|consen   47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKL----PGDLKVVFFVNSGSEA  121 (442)
T ss_pred             CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhC----CCCceEEEEecCCchH
Confidence            55677888877763  23 368999999998885421  334432 22445555555544    3334669999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEeCCCccchhHHH-HhcCcEEEEe-------------ccCCCCCC-CCC---------HHHH
Q 015768          102 FVNIVLTLC--DAGDSVVMFAPYYFNSYMSF-QMTGVTHILV-------------GPCSSKTL-HPD---------ADWL  155 (400)
Q Consensus       102 ~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~-------------~~~~~~~~-~~~---------~e~l  155 (400)
                      ++.+++...  ...-.|+....+|++..... -..+......             +|....+. .-+         .+++
T Consensus       122 Nelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l  201 (442)
T KOG1404|consen  122 NELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKEL  201 (442)
T ss_pred             HHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHH
Confidence            999998864  22246666777776644332 2222211111             01111110 000         2445


Q ss_pred             HHhhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768          156 EKTLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS  231 (400)
Q Consensus       156 ~~~l~---~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s  231 (400)
                      ++.+.   +.+ +.+.+.+..+...|.+ +++..+++..++|+++|.++|.||++.+|...|.-+.....+.+..+-|++
T Consensus       202 ~d~i~~~~~~~-vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmA  280 (442)
T KOG1404|consen  202 EDLILYDGPET-VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMA  280 (442)
T ss_pred             HHHHHhcCCCc-eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHH
Confidence            55554   333 5666666667777775 688899999999999999999999999988777434444556666677999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      |.+| .|+++|.+++.   +++.+-+.+.. ..++++.++++..++.+.|+-..  .++..+.......+|.+.|.++..
T Consensus       281 KgiG-nG~Pl~AVvtt---~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d  354 (442)
T KOG1404|consen  281 KGIG-NGFPLGAVVTT---PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK--EENLQENAAEVGSYLLEKLAALKD  354 (442)
T ss_pred             hhcc-CCCcceeeecC---HHHHHHHHhccccccccCCCchhHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhh
Confidence            9998 88999999999   89988888766 67889999999999888887422  134455556666777777665432


Q ss_pred             ----CcccCCCCceEEEeeCCCCC--------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768          311 ----GAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD  377 (400)
Q Consensus       311 ----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~  377 (400)
                          +--++.. |.++-+.+-+..        .....+.+.+ ++.|+.+.-|..+  .+.+||++.. .|.+|++.+++
T Consensus       355 ~h~iIGdVRG~-GLm~GvE~V~dk~~~~pp~~~~~~~i~~~c-ke~Gvlvg~g~i~--G~vfriaPPlciT~edi~f~~~  430 (442)
T KOG1404|consen  355 KHPIIGDVRGR-GLMLGVELVSDKSEPKPPATAEGAVIGEQC-KELGVLVGKGGIH--GNVFRIAPPLCITKEDIDFAVE  430 (442)
T ss_pred             cCCceeecccc-eeEEEEEEecccCCCCCcchHHHHHHHHHH-HHhCeeeeccccc--ceEEEecCCeeccHHHHHHHHH
Confidence                2222333 555544432111        1223344444 5899999666654  3499999776 89999977666


Q ss_pred             HH
Q 015768          378 RL  379 (400)
Q Consensus       378 ~l  379 (400)
                      ..
T Consensus       431 ~~  432 (442)
T KOG1404|consen  431 YF  432 (442)
T ss_pred             HH
Confidence            54

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.76  E-value=3.3e-18  Score=152.80  Aligned_cols=249  Identities=18%  Similarity=0.204  Sum_probs=165.2

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCc
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY  123 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~  123 (400)
                      ++|++++++.+..... . .|+......++++.+++.+    |  .+..+|++++|.|+.++++++++|++.|++..++|
T Consensus         7 ~~~~m~~a~~~a~~gd-~-~Yg~D~~~~~l~~~i~~l~----g--~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aH   78 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGD-D-AYGEDPTTARLEERIAELF----G--KEAALFVPSGTMANQLALRAHLRPGESVICADTAH   78 (290)
T ss_dssp             S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEH
T ss_pred             CCHHHHHHHHccccCC-c-ccCCChhHHHHHHHHHHHc----C--CCEEEEeCCCChHHHHHHHHHHhcCCceeccccce
Confidence            6799999996655433 2 4766655666666666655    5  45668999999999999999999999999999988


Q ss_pred             cchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCC-CccCCCHHHHHHHHHHHHH
Q 015768          124 FNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNP-SGTYIPERLLKRISDLCKA  195 (400)
Q Consensus       124 ~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~np-tG~~~~~~~l~~i~~l~~~  195 (400)
                      ....   ......|++++.+ +.+++| .+++++|++.+..    .+++++|+|++++|. .|.+++.+++++|.++|++
T Consensus        79 i~~~E~ga~~~~~G~~~~~l-~~~~~G-~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~  156 (290)
T PF01212_consen   79 IHFDETGAIEELSGAKLIPL-PSDDDG-KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELARE  156 (290)
T ss_dssp             HHHSSTTHHHHHTTCEEEEE-BECTGT-BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHH
T ss_pred             eeeeccchhhHhcCcEEEEC-CCcccC-CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHh
Confidence            5444   2235689999988 666534 7899999999974    244799999999885 4899999999999999999


Q ss_pred             cCCEEEEcccccccccCC--CCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc---H
Q 015768          196 AGSWLVVDNTYEYFMYDG--RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS---I  270 (400)
Q Consensus       196 ~~~~li~D~a~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~---~  270 (400)
                      ||+.++.|.+...-....  ..........+++..|++|..|+++  .+.++.+   ++++++....+......+.   .
T Consensus       157 ~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~--Gavl~~~---~~~i~~~~~~~k~~gg~~~~~G~  231 (290)
T PF01212_consen  157 HGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG--GAVLAGN---KEFIAKARRQRKRLGGGMRQAGV  231 (290)
T ss_dssp             HT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS--EEEEEES---HHHHHHHHHHHHHHTHHHHHTTH
T ss_pred             CceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc--ceEEEec---hHHHHHHHHHHHHhccCeeecce
Confidence            999999999965333211  0111112456688889999987654  2556666   6655444333321111111   1


Q ss_pred             HHH-----HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          271 ISQ-----HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       271 ~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      +..     .++...++.   | .....+..++.+++.+.|+.++..
T Consensus       232 ~~a~~~~~~~~l~~l~~---~-~~~~~~~~~~A~~La~~l~~~~~~  273 (290)
T PF01212_consen  232 LAAAELYQFAALRALEL---W-LERARHANAMAKRLAAGLEALGGV  273 (290)
T ss_dssp             HHHHHHHHHHHHCHEEC---S-HHHHHCHHHHHHCHHHCHHEECEE
T ss_pred             eeeechhhHHHHHHHHh---h-HHHHHHHHHHHHHHHHHHHHCCCc
Confidence            111     133333333   2 455566777789999999998873

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.75  E-value=1.8e-16  Score=139.55  Aligned_cols=338  Identities=16%  Similarity=0.125  Sum_probs=237.0

Q ss_pred             hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH
Q 015768           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN   99 (400)
Q Consensus        27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t   99 (400)
                      -+|+++++|.+.+ ..+.-.+++.+.....+++..      .+-|+.-.-...+.+.+++++    |+ .+.++ .+-+-
T Consensus        91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G~-E~aiv-Ys~gF  164 (467)
T KOG1358|consen   91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----GT-EDAIV-YSYGF  164 (467)
T ss_pred             ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----CC-cceee-ecccc
Confidence            3567888887765 667778888888877777643      344666666778889999998    53 34444 44555


Q ss_pred             HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC----------C-CeEE
Q 015768          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----------T-PKLV  168 (400)
Q Consensus       100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~----------~-~~~v  168 (400)
                      .++..++.++++.||.|.+..-..++....++.....+.++.+       .|+++++..+.+.+          . .+-|
T Consensus       165 ~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfi  237 (467)
T KOG1358|consen  165 STIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFI  237 (467)
T ss_pred             chhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceEEE
Confidence            8899999999999999999999998999888888878777722       26777777664221          1 2445


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----cc-ccCCCcEEEEeccccccCCCcceeE
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HC-CVEGDHVVNLFSFSKAYGMMGWRVG  242 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~-~~~~~~~i~~~s~sK~~g~~g~~~G  242 (400)
                      ++..-..++|.+.|   +.+|.++..++...+|.||.++.+..+...     +. ....+.+++++|+.-+++..|   |
T Consensus       238 v~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---g  311 (467)
T KOG1358|consen  238 VVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---G  311 (467)
T ss_pred             EEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---c
Confidence            66666778999999   888888989999999999999866654321     11 223567899999988886444   7


Q ss_pred             EEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEE
Q 015768          243 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL  322 (400)
Q Consensus       243 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  322 (400)
                      +.+++. ....++++.....-++-+.++....++..++.. .+|-.++.+.++.....+.++|+......+.+..-+...
T Consensus       312 Fc~G~~-~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i-~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~  389 (467)
T KOG1358|consen  312 FCAGKS-FIADHQRLSGSGYCFSASLPPYLAGAAIKAILI-EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPII  389 (467)
T ss_pred             eeecce-eeEeeeeccccceeeeccCchhhhhhHHHHHHH-HhhCcchhhhhhccccccchhhhcCCceEEecCcCCcee
Confidence            776652 123345665555444555677777777777765 344456667777777778888888665566655546666


Q ss_pred             EeeCCCCCCC-------HHHHHHHHHHhcCeEEeCCCcc------CCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          323 WARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       323 ~~~~~~~~~~-------~~~~~~~l~~~~gi~v~~g~~~------~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+.+......       .+++++..+.+ ++.+.....-      --+..||+++.. +++++++++...+++...++
T Consensus       390 hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~  466 (467)
T KOG1358|consen  390 HLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV  466 (467)
T ss_pred             eeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence            6776543211       23455555544 8777544322      125689999998 99999999999999987764

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.72  E-value=8.5e-17  Score=148.37  Aligned_cols=270  Identities=16%  Similarity=0.146  Sum_probs=173.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+....  .......+...++++.|.+..+-..+++++++++++|++
T Consensus        13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve   90 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYV--SFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVE   90 (339)
T ss_dssp             TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSC--STTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCCccceecCCCccccchhHHHHhhhcccc--cccceeccchhhhhhhhhhccccccceeeeccCchHHHH
Confidence            4578899998764  5554 6899999999988764321  112334556777888887777445689999999999999


Q ss_pred             HHHHHhc------C--CCCEEEEeCCCccchhHHHHh-cC------------cEEEEeccCCCCCC----CCCHHHHHHh
Q 015768          104 NIVLTLC------D--AGDSVVMFAPYYFNSYMSFQM-TG------------VTHILVGPCSSKTL----HPDADWLEKT  158 (400)
Q Consensus       104 ~~~~~l~------~--~gd~vlv~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~----~~~~e~l~~~  158 (400)
                      .+++...      .  ...+|+....+|++....... .+            ..+..+ |.++...    ....+.+++.
T Consensus        91 ~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~  169 (339)
T PF00202_consen   91 AALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFV-PFPDPAADEEEQACLNALEEL  169 (339)
T ss_dssp             HHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEE-ETTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccc-cCCccchhhhHHHHHHHHHHH
Confidence            9999876      2  337899999999886543222 11            122333 3321100    0001123333


Q ss_pred             hc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccc
Q 015768          159 LE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKA  233 (400)
Q Consensus       159 l~--~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~  233 (400)
                      +.  ....+.+++++..+...|. .++.+.+++|.++|++||+++|+||++.++...|..+...  .-..|++  +++|.
T Consensus       170 ~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv--~~gK~  247 (339)
T PF00202_consen  170 IAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIV--TFGKG  247 (339)
T ss_dssp             HHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEE--EEEGG
T ss_pred             HHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCccc--ccccc
Confidence            22  2223578888866655665 5678899999999999999999999999886555432211  1123454  44699


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      ++ .|+++|.++.+   +++.+.+.......+++.++++..++.+.|+..++  .+..++..+..+++.+.|++
T Consensus       248 l~-gG~p~sav~~~---~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~--~~~~~~~~~~g~~l~~~L~~  315 (339)
T PF00202_consen  248 LG-GGLPISAVLGS---EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEE--EDLLERVRELGERLREGLRE  315 (339)
T ss_dssp             GG-TTSSEEEEEEE---HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHH
T ss_pred             hh-hhhhccccccc---chhhccccccccccccccchHhhhhhhhHHHhhcc--HHHHHHHHHHHHHHHHHHHH
Confidence            97 67999999999   78877775555667888899999999988885221  22344445555555555543

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.72  E-value=1.4e-15  Score=141.45  Aligned_cols=273  Identities=16%  Similarity=0.189  Sum_probs=183.6

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-------CcEEEeCChHHHHHHHHHHhcC-----
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCD-----  111 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-------~~i~~~~g~t~a~~~~~~~l~~-----  111 (400)
                      .+..++..+....-+.+...|...+....++.++.+++.+.+|.+.       ..-++|+|+|+++..++.+..+     
T Consensus        51 ~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~  130 (373)
T PF00282_consen   51 SPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPR  130 (373)
T ss_dssp             CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhh
Confidence            4566666555555554456666666788999999999999998872       3578999999999988876531     


Q ss_pred             ---CC------CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc---C-CCCeEEEEeCCCCCCc
Q 015768          112 ---AG------DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---K-PTPKLVSVVNPGNPSG  178 (400)
Q Consensus       112 ---~g------d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~---~-~~~~~v~l~~p~nptG  178 (400)
                         .|      -.|++++-+|+++..++..+|+.++.| |.++++ .+|.++|++.+..   + ..|-+|+.+.++..+|
T Consensus       131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I-~~~~~~-~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G  208 (373)
T PF00282_consen  131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKI-PTDEDG-RMDIEALEKALEKDIANGKTPFAVVATAGTTNTG  208 (373)
T ss_dssp             HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE--BBTTS-SB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred             hhhcccccccccccccccccccHHHHhcceeeeEEEEe-cCCcch-hhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence               12      257777889999999999999999999 998865 7899999998862   2 2133566667888999


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCcccc-CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      .+-|   +.+|.++|+++|+|+++|.+|++..+  ........ -...+=+..++||+++ ....+|++..++  +....
T Consensus       209 a~D~---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~--~~~l~  282 (373)
T PF00282_consen  209 AIDP---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRD--KSDLR  282 (373)
T ss_dssp             BB-S---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESS--GGGHH
T ss_pred             cccC---HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhc-CCccceeEEeec--ccchH
Confidence            9988   89999999999999999999997332  11111111 1233455668999997 667899999887  33332


Q ss_pred             HHHH----hhc-------------cCCcCc----cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          256 QLLK----VQD-------------NIPICA----SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       256 ~l~~----~~~-------------~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      ....    +..             ..+...    ..+..++....+  |.+.+.++.++..++++++.+.|++.+.+++.
T Consensus       283 ~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~--G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~  360 (373)
T PF00282_consen  283 DAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSL--GREGYRERIRRCIELARYLADRLRKDPRFELV  360 (373)
T ss_dssp             GGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred             HHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            2110    000             001111    223333333332  45778999999999999999999999876776


Q ss_pred             CCCCceEEEeeC
Q 015768          315 GGEGAIYLWARL  326 (400)
Q Consensus       315 ~~~~~~~~~~~~  326 (400)
                      .+.....+++++
T Consensus       361 ~~~~~~~vcFr~  372 (373)
T PF00282_consen  361 NEPDLNIVCFRY  372 (373)
T ss_dssp             STTSSSEEEEEE
T ss_pred             cCCCceEEEEEe
Confidence            655566666654

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.72  E-value=3.1e-14  Score=139.49  Aligned_cols=298  Identities=14%  Similarity=0.088  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC--C
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--L  148 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~  148 (400)
                      ....+..+..++.+|.+ ...++++|+|.++.+++.+++++||.|++...||-+..+++...|+.++++.|.. +.|  .
T Consensus       195 G~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g  273 (714)
T PRK15400        195 GPHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG  273 (714)
T ss_pred             hHHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence            34445555555556753 5567789999999999999999999999999999999999999999999984443 112  1


Q ss_pred             CCC-----HHHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC-C-cc
Q 015768          149 HPD-----ADWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR-K-HC  217 (400)
Q Consensus       149 ~~~-----~e~l~~~l~~~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~-~-~~  217 (400)
                      .++     .+.+++.+...+.   |+.++|++|+ -.|.+.+   +++|.++|+.++  +++||||+... +... + ..
T Consensus       274 ~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~s  347 (714)
T PRK15400        274 GIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKC  347 (714)
T ss_pred             CCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcccCCcC
Confidence            234     7899999874433   3378888884 4799999   888888888777  68999987443 2221 1 11


Q ss_pred             ccCC-----CcEEEEeccccccCCCcceeEE-EEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCc-HHHHH
Q 015768          218 CVEG-----DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGP-EWVTE  289 (400)
Q Consensus       218 ~~~~-----~~~i~~~s~sK~~g~~g~~~G~-i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~  289 (400)
                      ....     +.++++.|.||.+  +++..+. +..+....  .++++.... ..+.+++.+....+..+..... +...+
T Consensus       348 am~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd--~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~  423 (714)
T PRK15400        348 GMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVN--EETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKR  423 (714)
T ss_pred             hhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcCCCC--HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHH
Confidence            1211     3348899999998  4554443 43332111  233433222 2344555444433333322111 12344


Q ss_pred             HHHHHHHHHHHHHHHhccCCC------CcccCCC-----------------------------CceEEEeeCCC------
Q 015768          290 RVKDLVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLPE------  328 (400)
Q Consensus       290 ~~~~~~~~~~~l~~~L~~~~~------~~~~~~~-----------------------------~~~~~~~~~~~------  328 (400)
                      ..+...+....+++.|.+++.      +.+..++                             ...-+.+..+.      
T Consensus       424 l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~  503 (714)
T PRK15400        424 LINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGT  503 (714)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCcc
Confidence            555555566666666655432      2222111                             01122333333      


Q ss_pred             ---CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          329 ---KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       329 ---~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                         .+..+..+..+| +++||.+.-..    ...+-+-++- .++++++.+++.|.++-+.
T Consensus       504 ~~~~Gipg~~v~~~L-~e~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~  559 (714)
T PRK15400        504 MSDFGIPASIVAKYL-DEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRA  559 (714)
T ss_pred             ccccCCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence               223466777777 68999997543    3444444443 6899999998888877443

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=8.2e-16  Score=137.88  Aligned_cols=315  Identities=17%  Similarity=0.186  Sum_probs=209.9

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCcc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF  124 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~  124 (400)
                      .+.+.+++.+.--.... + ....|..+..+++.+.+++..|. ++.++|.-| -..+...+.+|+.||.-|+-.+-.|.
T Consensus       157 a~~~~~~~~kygl~~cs-s-~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHa  232 (519)
T KOG1357|consen  157 AEASLKSFDKYGLSRCS-S-RHEAGTTEEHKELEELVARFLGV-EDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHA  232 (519)
T ss_pred             ChHHHHHHHHhcccccc-c-chhcccHHHHHHHHHHHHHhcCC-cceEEEecc-ccccccCcceeecCCcceeeccccch
Confidence            45566655554332111 0 12244555555555555555564 566777665 45666777889999999999999999


Q ss_pred             chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-------cCCC---CeEEEEe-CCCCCCccCCCHHHHHHHHHHH
Q 015768          125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-------TKPT---PKLVSVV-NPGNPSGTYIPERLLKRISDLC  193 (400)
Q Consensus       125 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-------~~~~---~~~v~l~-~p~nptG~~~~~~~l~~i~~l~  193 (400)
                      +....++..|+....+ ..+      |+++||+.|+       +++.   .|.+++. .-...-|.+..   +.++.+++
T Consensus       233 Si~~GaRLSgAtiRVf-kHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalk  302 (519)
T KOG1357|consen  233 SLITGARLSGATTRVF-RHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALK  302 (519)
T ss_pred             heeccccccCceEEEE-ecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhh
Confidence            9999999999988877 332      5666777664       2221   2455554 45667888888   89999999


Q ss_pred             HHcCCEEEEcccccccccCCCCc------cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc-
Q 015768          194 KAAGSWLVVDNTYEYFMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI-  266 (400)
Q Consensus       194 ~~~~~~li~D~a~~~~~~~~~~~------~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~-  266 (400)
                      +++..+++.||+|+..+.+....      -....+.++.+++|.|++|..|   ||+.++   +++++.+........+ 
T Consensus       303 kkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags---k~lid~lrt~s~~~~ya  376 (519)
T KOG1357|consen  303 KKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS---KELIDYLRTPSPSALYA  376 (519)
T ss_pred             ccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc---HHHHhhhccCCCceeec
Confidence            99999999999999777643321      1223577899999999998777   999999   8898888765543222 


Q ss_pred             --CccHHHHHHHHHHhcC-----CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEe--eCCCCCCCHHHHH
Q 015768          267 --CASIISQHLALYSLQT-----GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA--RLPEKHLDDFEVV  337 (400)
Q Consensus       267 --~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  337 (400)
                        .+++..|.. ...++.     +.+...+..+++.++..+++..|+..++ .+.+...+.++.+  -.+..   ...+-
T Consensus       377 t~~sppvaqq~-~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gf-ivyG~~dSpVvplll~~~~k---~~~f~  451 (519)
T KOG1357|consen  377 TSLSPPVAQQI-LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGF-IVYGNNDSPVVPLLLYGPAK---IVAFS  451 (519)
T ss_pred             ccCChHHHHHH-HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcE-EEecCCCCCcceeeecCccc---ccHHH
Confidence              233444433 334442     2355688889999999999999999876 5555444433322  22322   23444


Q ss_pred             HHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++|+ +++|.+.-+.+..   .....|+|.+. ++.|+++.+++.+.++=..
T Consensus       452 r~~l-~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~  502 (519)
T KOG1357|consen  452 REML-ERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDE  502 (519)
T ss_pred             HHHH-hcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence            4565 6777765444332   24677998887 8999999988888776533

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.72  E-value=1.1e-14  Score=147.95  Aligned_cols=329  Identities=13%  Similarity=0.038  Sum_probs=208.0

Q ss_pred             HHHHHHHhcCCCeEEcCC-CCCCCCCcHHHHHHHHHhhcC-CCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768           20 VQIQELVRGAKNAVSLAQ-GVVYWQPPKMAMEKVKELVWD-PSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVT   95 (400)
Q Consensus        20 ~~~~~~~~~~~~~i~~~~-~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~   95 (400)
                      ..+.++-.....+.+|-. |.-+...|+.+++++.+...- ...++|.+.  +|..+...+....+.++.|++++++.++
T Consensus        92 ~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~  171 (993)
T PLN02414         92 EHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLL  171 (993)
T ss_pred             HHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeec
Confidence            333334344444444433 322334667777888776642 225566543  4444444444444556669999999999


Q ss_pred             CChHHHHHHHHHHhc-CC--CCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768           96 AGANQAFVNIVLTLC-DA--GDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV  168 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~-~~--gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v  168 (400)
                      .++|.+.+.++.++. ++  +++|++++..|+.....+    +..|++++.+ +.+..+          .....  ...+
T Consensus       172 d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v-~~~~~~----------~~~~~--v~~v  238 (993)
T PLN02414        172 DEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVA-DEKDFD----------YSSGD--VCGV  238 (993)
T ss_pred             CChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEe-cchhhc----------cccCc--eEEE
Confidence            999999999988874 43  478999999999987665    3468898888 654311          01111  2344


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc---CCCcceeEEEE
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY---GMMGWRVGYIA  245 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---g~~g~~~G~i~  245 (400)
                      ++..| |.+|.+.|   +++|+++|+++|+++++ .++... ..... .....+.|+++++.+|+.   |.+|.+.|++.
T Consensus       239 lvq~P-~~~G~v~d---v~~I~~~ah~~GaL~iV-aad~la-l~~l~-~pge~GADi~vgsgqKwg~P~G~GGP~aGfla  311 (993)
T PLN02414        239 LVQYP-ATDGEVLD---YAEFVKNAHANGVKVVM-ATDLLA-LTMLK-PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLA  311 (993)
T ss_pred             EEecC-CCCeEEcC---HHHHHHHHHHcCCEEEE-EECHHH-hcCCC-CHhhccCcEEEECCCccccCCCCCCCCeeEEE
Confidence            44444 34899999   99999999999999999 554421 11111 133457789999999987   22355689999


Q ss_pred             ccCCcHHHHHHHHH-hhc---------c--------------CCcCccHHHHHHHHHHhc------CCcHHHHHHHHHHH
Q 015768          246 YPSEVEGFATQLLK-VQD---------N--------------IPICASIISQHLALYSLQ------TGPEWVTERVKDLV  295 (400)
Q Consensus       246 ~~~~~~~~~~~l~~-~~~---------~--------------~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~  295 (400)
                      ++   +++.+.+.. ...         .              -..+.|.....++.+.+.      .+...+++..+++.
T Consensus       312 vr---~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~  388 (993)
T PLN02414        312 TS---QEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH  388 (993)
T ss_pred             EC---HHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence            98   555443321 000         0              011334433333333332      12234677778889


Q ss_pred             HHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHH
Q 015768          296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA  374 (400)
Q Consensus       296 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~  374 (400)
                      ++..++++.|+..+. ++..+.-..-+.++++    +..++.++|. ++||.++...    .+.+|+|++. +|++|++.
T Consensus       389 ~la~~l~~~L~~~G~-~~~~~~~f~~vt~~~~----~~~~v~~~L~-~~gI~l~~~~----~~~lrvs~~e~~T~edId~  458 (993)
T PLN02414        389 GLAGVFAAGLKKLGF-QVQSLPFFDTVKVKCS----DADAIADAAA-KVGINLRVVD----ANTVTVSFDETTTLEDVDK  458 (993)
T ss_pred             HHHHHHHHHHhhcCC-ccCCCCCcCeEEEecC----CHHHHHHHHH-HCCCeeEEec----CCeEEEEeeccCCHHHHHH
Confidence            999999999988664 4443322334445554    3577888885 8899876432    4679999998 89999999


Q ss_pred             HHHHHHH
Q 015768          375 AADRLRR  381 (400)
Q Consensus       375 ~~~~l~~  381 (400)
                      +++.|..
T Consensus       459 L~~~l~~  465 (993)
T PLN02414        459 LFKVFAG  465 (993)
T ss_pred             HHHHHcc
Confidence            9999863

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.71  E-value=5.9e-14  Score=137.63  Aligned_cols=168  Identities=14%  Similarity=0.116  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-HHhcCcEEEEeccCC-CCC--
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCS-SKT--  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~-~~~--  147 (400)
                      ....+..+..++.+|.+ ...++++|+|.++.+++.+++++||.|++...||-+..+. +...|+.++++.|.. +.|  
T Consensus       174 G~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~  252 (720)
T PRK13578        174 GAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFI  252 (720)
T ss_pred             hHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCc
Confidence            33445555555556753 5677889999999999999999999999999999999985 889999999984443 222  


Q ss_pred             CCCCH-----HHHHHhhccC-CC-------CeEEEEeCCCCCCccCCCHHHHHHHHHH-HHHcCCEEEEcccccccc-cC
Q 015768          148 LHPDA-----DWLEKTLETK-PT-------PKLVSVVNPGNPSGTYIPERLLKRISDL-CKAAGSWLVVDNTYEYFM-YD  212 (400)
Q Consensus       148 ~~~~~-----e~l~~~l~~~-~~-------~~~v~l~~p~nptG~~~~~~~l~~i~~l-~~~~~~~li~D~a~~~~~-~~  212 (400)
                      ..++.     +.+++.+... +.       .++++|++|+. .|.+.+   +++|+++ ++.++ +|++||||+... +.
T Consensus       253 g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~  327 (720)
T PRK13578        253 GGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFI  327 (720)
T ss_pred             CCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchhhhccC
Confidence            13354     4488888744 11       48999998865 799999   8888887 67777 999999997443 32


Q ss_pred             CC----CccccCCC----cEEEEeccccccCCCcceeE-EEEcc
Q 015768          213 GR----KHCCVEGD----HVVNLFSFSKAYGMMGWRVG-YIAYP  247 (400)
Q Consensus       213 ~~----~~~~~~~~----~~i~~~s~sK~~g~~g~~~G-~i~~~  247 (400)
                      ..    +......+    .++++-|.||.+  +++-.+ ++..+
T Consensus       328 p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk  369 (720)
T PRK13578        328 PMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK  369 (720)
T ss_pred             cccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence            21    11112222    348899999998  455544 45444

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.71  E-value=1.5e-13  Score=134.62  Aligned_cols=297  Identities=13%  Similarity=0.043  Sum_probs=180.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC--C
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--L  148 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~  148 (400)
                      ....+..+..++.+|.+ ...++++|+|.++.+++.+++++||.|++...||-+..+++...|+.++++.|.. +.|  .
T Consensus       195 G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g  273 (713)
T PRK15399        195 GPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG  273 (713)
T ss_pred             hHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence            34444555555556753 5677789999999999999999999999999999999999999999999984443 222  1


Q ss_pred             CCCH-----HHHHHhhccCC---CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEcccccccc-cCC-CC-c
Q 015768          149 HPDA-----DWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL-VVDNTYEYFM-YDG-RK-H  216 (400)
Q Consensus       149 ~~~~-----e~l~~~l~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l-i~D~a~~~~~-~~~-~~-~  216 (400)
                      .++.     +.+++.+...+   +|++++|++|+ -.|.+.+   +++|.++|   |+.+ ++||||+... +.. .+ .
T Consensus       274 ~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~  346 (713)
T PRK15399        274 GIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGK  346 (713)
T ss_pred             CCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCc
Confidence            3344     88998887433   24789999884 4799999   77777777   5666 6999997433 222 11 1


Q ss_pred             cccCC--CcE---EEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCc-HHHH
Q 015768          217 CCVEG--DHV---VNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGP-EWVT  288 (400)
Q Consensus       217 ~~~~~--~~~---i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~  288 (400)
                      .....  +.+   +++-|.||.++  ++.. +++..+...  -.++++.... ..+.+++.+....+..+-.... ...+
T Consensus       347 sam~~~~~aD~~i~~tQStHKtL~--alTQaS~iHvk~~v--d~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~  422 (713)
T PRK15399        347 SGMSGERVPGKVIFETQSTHKMLA--AFSQASLIHIKGEY--DEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGK  422 (713)
T ss_pred             ChhhCCCCCCeeeeeeeehhcccc--ccchheeeeecCCC--CHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhH
Confidence            12211  223   44899999984  5544 455554321  1234443322 2344555444443333322111 1234


Q ss_pred             HHHHHHHHHHHHHHHHhccCCC------CcccCCC-----------------------------CceEEEeeCC------
Q 015768          289 ERVKDLVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLP------  327 (400)
Q Consensus       289 ~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~-----------------------------~~~~~~~~~~------  327 (400)
                      +..+...+....+++.+.++..      +.+..++                             ...-+++..+      
T Consensus       423 ~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g  502 (713)
T PRK15399        423 RLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQG  502 (713)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCccccc
Confidence            4445555555556655554322      1222110                             0112233333      


Q ss_pred             ---CCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          328 ---EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       328 ---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                         ..+..+..+..+| +++||.+.-..    ...+-+-++- .++++++.+++.|.++-+.
T Consensus       503 ~~~~~Gi~g~~l~~~L-~e~gI~~E~~d----~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~  559 (713)
T PRK15399        503 NMSEEGIPAALVAKFL-DERGIVVEKTG----PYNLLFLFSIGIDKTKAMGLLRGLTEFKRA  559 (713)
T ss_pred             ccccCCCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence               2234567788877 58899997543    3444444433 5899999998888877544

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.70  E-value=2.7e-14  Score=130.61  Aligned_cols=323  Identities=14%  Similarity=0.089  Sum_probs=208.8

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCC-----C-CCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEE-eCChHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSI-----S-KYGADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFV  103 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~-~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~-~~g~t~a~~  103 (400)
                      .++|+.|-  ...|++|++++.+.+.+...     . ....+....++.+.+.+.|++.++++. .+|++ ..|+|.+++
T Consensus         5 ~~nF~aGP--a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e   82 (364)
T PRK12462          5 QLNFSGGP--GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS   82 (364)
T ss_pred             cceecCCC--cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence            45666652  33579999999988865221     1 111344456777778888888889853 45555 566999999


Q ss_pred             HHHHHhcCCCCEEE-EeCCCccc--hhHHHHhcCcEEEEeccC---CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768          104 NIVLTLCDAGDSVV-MFAPYYFN--SYMSFQMTGVTHILVGPC---SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (400)
Q Consensus       104 ~~~~~l~~~gd~vl-v~~p~~~~--~~~~~~~~g~~~~~~~~~---~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt  177 (400)
                      .+...++.+||+++ +...++++  +.+.++..| ++..+ ..   .+.+..++.+.+    +..+..+.|.+++-...+
T Consensus        83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~-~~~~~~~~~~~p~~~~~----~~~~d~~~v~~t~NETst  156 (364)
T PRK12462         83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVV-WDGAASGYRTLPSLAEL----DWDARAPFRHYVSNETVE  156 (364)
T ss_pred             HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEe-cCcCCCCCCcCCCHHHh----ccCCCCcEEEEccCCCCc
Confidence            99999999999665 55556555  446666676 44333 21   112234455554    222234788888777788


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      |+.++        ++.+.+++++|+|.+.+.+   +.+......  +++..+..|.+|.+|  ++.++.+   ++..++.
T Consensus       157 Gv~~~--------~~~~~~~~llvvD~sS~~~---s~pid~~~~--dvi~agsQKnlgP~G--ltvvivs---~~al~~~  218 (364)
T PRK12462        157 GLQFP--------DAAGLPDSPLIADMSSDFM---SRPFDVEAY--GMVYAHAQKNLGPAG--VTVAIIR---RALLERV  218 (364)
T ss_pred             eEecC--------cccccCCCeEEEEcCchhh---CCCCChHHc--cEEEeeccccCCCCc--eEEEEEC---HHHHhhc
Confidence            99886        2222368999999998843   333333333  688889999999666  5777777   5555543


Q ss_pred             HHh------------hccCCcCccHHHHHHHHHHhcCC-cH--HHHHHHHHHHHHHHHHHHHhccCCCCccc----CCCC
Q 015768          258 LKV------------QDNIPICASIISQHLALYSLQTG-PE--WVTERVKDLVRNREIIREALSPLGEGAVK----GGEG  318 (400)
Q Consensus       258 ~~~------------~~~~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~----~~~~  318 (400)
                      ...            .....++++....+++...|+-- ++  .++.+.++.++.++.+++.+.+.+++...    ...+
T Consensus       219 ~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS  298 (364)
T PRK12462        219 PDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARS  298 (364)
T ss_pred             cccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcC
Confidence            321            11234578888888888776531 23  57888999999999999999988742211    2234


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      -+.+.++++... ...++... ++++|+.-..|.  ..-+.+|+|+-. ++.|.++.+++-++++-+
T Consensus       299 ~mnv~f~~~~~~-l~~~f~~~-a~~~gl~~lkGh--r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~  361 (364)
T PRK12462        299 TMNVAFRFRQPR-LDTLFKEQ-STEAGFCGLSGH--RSIGGIRASLYNAVSEQAVSRLCAFLKDFAI  361 (364)
T ss_pred             cceEEEEcCCHH-HHHHHHHH-HHHCCCccccCC--cccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence            566777776532 24455554 468999886654  345779999766 787766665555555443

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.70  E-value=2.7e-14  Score=123.21  Aligned_cols=348  Identities=14%  Similarity=0.062  Sum_probs=231.5

Q ss_pred             chHHHHHHHHHhcCCCeEEcCCCCCCCCCcH---HHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCc
Q 015768           16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPK---MAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSS   91 (400)
Q Consensus        16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~   91 (400)
                      ......+++.|+...+.|.++.++....++.   +.+++......+..+.++. ....=-.+-+.+.+.++.+.|..+.+
T Consensus        16 ~dpl~~lr~~f~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~E   95 (407)
T COG3844          16 ADPLAKLRDRFALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGE   95 (407)
T ss_pred             cCchhhhHhhccCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCc
Confidence            5566788899999999999999886664322   2233333333332222222 12223345567777787777999999


Q ss_pred             EEEeCChHHHHHHHHHHhc--CCCCEEEEeCCCccchhH-----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768           92 VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (400)
Q Consensus        92 i~~~~g~t~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~  164 (400)
                      ++++.+++--++.++.+..  .+|++|++++..-++...     ..+..+..   +   +-. ..+.++++++.++.+. 
T Consensus        96 vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~---~~~-~~~~P~~~~~~~~dd~-  167 (407)
T COG3844          96 VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---Y---DLE-GVIAPRALEEAITDDV-  167 (407)
T ss_pred             eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---c---cce-eeeChHHHHHhhccce-
Confidence            9999999888888887765  458888888766544332     22222221   0   111 1345668888888776 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEE
Q 015768          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGY  243 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~  243 (400)
                       .+|++++.+.-||..++   +.+|.+++++||++++-|=+|+-+.   .+......+.++-+++..|.++ .||-..|.
T Consensus       168 -AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGa---vp~~Lh~~gaDfaigcsyKYLNgGPGapa~l  240 (407)
T COG3844         168 -AVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGA---VPVDLHAAGADFAIGCSYKYLNGGPGAPAGL  240 (407)
T ss_pred             -EEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCC---cceeecccCCCeeeeeeceeccCCCCCceeE
Confidence             88888899999999999   9999999999999999999998443   3444556678888999999994 35555554


Q ss_pred             EEccCCcHHHHHHHHH-------------------hhccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHH
Q 015768          244 IAYPSEVEGFATQLLK-------------------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       244 i~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~  303 (400)
                      .+.++..+.....+..                   +.+....+.+..+..++..+|+... -.+.+.+++...+.+++.+
T Consensus       241 ~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fie  320 (407)
T COG3844         241 FVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIE  320 (407)
T ss_pred             EeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHH
Confidence            4444311111111110                   1111223456666666666666422 1267778888888888888


Q ss_pred             HhccCC---CCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHH
Q 015768          304 ALSPLG---EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKA  374 (400)
Q Consensus       304 ~L~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~  374 (400)
                      .++...   ..++..|.    -|..+.+..|    ...+++++|. ++||..-    |..|+.+||.|.-  ++.+|+-.
T Consensus       321 LvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp----~~~~V~qaLi-~rGVigD----~R~P~vlRfgftPlY~~~~DVw~  391 (407)
T COG3844         321 LVEARCEYYGLTLVTPRAHEERGSQVSLYHP----HGYQVMQALI-DRGVIGD----FREPDVLRFGFTPLYVSFVDVWD  391 (407)
T ss_pred             HHHhccccCCcEEeccchhhhccceeeEecC----cHHHHHHHHH-HcCcccc----ccCCCeeeecCccceechhHHHH
Confidence            887642   23444443    2455666666    4788898886 8999753    3468999999875  89999999


Q ss_pred             HHHHHHHHHHHHh
Q 015768          375 AADRLRRGLEELV  387 (400)
Q Consensus       375 ~~~~l~~~l~~~~  387 (400)
                      +++.|.++++...
T Consensus       392 AV~~L~evL~t~a  404 (407)
T COG3844         392 AVDALEEVLDTLA  404 (407)
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999998753

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.68  E-value=4e-14  Score=144.65  Aligned_cols=304  Identities=14%  Similarity=0.072  Sum_probs=197.6

Q ss_pred             CcHHHHHHHHHhhc-CCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc-CC--CCEEE
Q 015768           44 PPKMAMEKVKELVW-DPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-DA--GDSVV  117 (400)
Q Consensus        44 ~~~~v~~a~~~~~~-~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~-~~--gd~vl  117 (400)
                      .|+.+++.+.+.-. -....+|.+  ++|.-+..-++...+.++.|++..++.++.++|++.+.++.++. ++  +++|+
T Consensus        90 ~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vl  169 (954)
T PRK05367         90 TPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFF  169 (954)
T ss_pred             CcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEE
Confidence            34445455555321 111344543  24554555555555666679999999999999999999988874 34  48999


Q ss_pred             EeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015768          118 MFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC  193 (400)
Q Consensus       118 v~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~  193 (400)
                      +++.+|+.....+    +..|++++.+ +.+++     ++      ..+  ..++++.+| |-+|.+.|   +++|+++|
T Consensus       170 v~~~~hP~~~~v~~t~a~~~G~ev~~~-~~~~d-----~~------~~~--~~~vlvq~p-~~~G~i~d---~~~i~~~a  231 (954)
T PRK05367        170 VDDDVHPQTLDVLRTRAEPLGIEVVVG-DAAKA-----LD------HDD--VFGVLLQYP-GTSGEVRD---YTALIAAA  231 (954)
T ss_pred             EcCccCHHHHHHHHHHHHhCCCEEEEe-cCccC-----CC------ccc--EEEEEEecC-CCCeeecc---HHHHHHHH
Confidence            9999998877654    5579999988 66432     11      112  355555565 56999998   99999999


Q ss_pred             HHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc---CCCcceeEEEEccCCcHHHHHHHHHhhcc-------
Q 015768          194 KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY---GMMGWRVGYIAYPSEVEGFATQLLKVQDN-------  263 (400)
Q Consensus       194 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---g~~g~~~G~i~~~~~~~~~~~~l~~~~~~-------  263 (400)
                      +++|+++++|..+..+....   .....+.|++++|.+|+.   |.+|...|++.++   +++.+.+....-.       
T Consensus       232 h~~Gal~~vda~~~Al~~l~---~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr---~~~~r~lpgrivG~s~d~~g  305 (954)
T PRK05367        232 HARGALVAVAADLLALTLLT---PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVR---DAYKRSMPGRIVGVSVDAAG  305 (954)
T ss_pred             HHcCCEEEEEehhhhccCCC---ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEEC---HHHHhhCCCCeeeeecccCC
Confidence            99999999998664332211   234457889999999982   1234458999998   5665554311000       


Q ss_pred             -----------------CCcCccHHHH---HHHHHH--hc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768          264 -----------------IPICASIISQ---HLALYS--LQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  320 (400)
Q Consensus       264 -----------------~~~~~~~~~~---~~~~~~--l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  320 (400)
                                       -..+.|....   .++.++  +. .+...+++..++...+..++++.|+..+. ++..+.-..
T Consensus       306 ~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~-~~~~~~~f~  384 (954)
T PRK05367        306 NPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGL-EVVHDSFFD  384 (954)
T ss_pred             CcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCc-ccCCCCCCC
Confidence                             0011222221   111111  11 23355677788889999999999987543 443332122


Q ss_pred             EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                      .+.++++   .+..++.++|. ++||.+..-    .++.+|+|++. +|++|++.+++.|.
T Consensus       385 ~~~~~~~---~~~~~i~~~l~-~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        385 TLTVEVG---GDAAAVLARAL-AAGINLRRV----DDDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             eEEEeCC---CCHHHHHHHHH-HCCceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence            3344543   25788888886 899998431    25689999998 89999999999997

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.66  E-value=2.3e-13  Score=125.09  Aligned_cols=334  Identities=12%  Similarity=0.071  Sum_probs=214.0

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      -+|||=+-...-.++++.+++|..    + --.|+.++....+++.+++.+    |  .+.+++|..++.+..+++..++
T Consensus        42 V~IDLrSDTgT~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~----G--~E~alpthqGRgaE~Il~~~~~  110 (467)
T TIGR02617        42 VFIDLLTDSGTGAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLI  110 (467)
T ss_pred             eEEECccCCCCCCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHh----C--CceEEECCCCchHHHHHHHhhc
Confidence            356664433322367888888876    2 234777778888999999887    4  4568899889999999999998


Q ss_pred             C-CCCEEEEeCC-------Cccc-hhHHHHhcCcEEEEeccCC---------CCCCCCCHHHHHHhhccC--CCCeEEEE
Q 015768          111 D-AGDSVVMFAP-------YYFN-SYMSFQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETK--PTPKLVSV  170 (400)
Q Consensus       111 ~-~gd~vlv~~p-------~~~~-~~~~~~~~g~~~~~~~~~~---------~~~~~~~~e~l~~~l~~~--~~~~~v~l  170 (400)
                      + |||.+.+..+       .|+. ........|+.++.+ +.+         +...++|++.+++.+++.  ..+..+..
T Consensus       111 ~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l-~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~  189 (467)
T TIGR02617       111 KKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNV-YTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA  189 (467)
T ss_pred             ccccccccccccccccceEEEEecchHHHHHcCceeecc-cchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence            8 7887775443       2222 334567788877665 322         223478999999999842  11233332


Q ss_pred             eCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-c---------cCCCCcccc----CCCcEEEEeccccccC
Q 015768          171 VNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF-M---------YDGRKHCCV----EGDHVVNLFSFSKAYG  235 (400)
Q Consensus       171 ~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~-~---------~~~~~~~~~----~~~~~i~~~s~sK~~g  235 (400)
                      +-. |.-.|.++|.++++++.++|++||+.++.|.+-..- +         +.+......    ....+.+..|+||.+|
T Consensus       190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg  269 (467)
T TIGR02617       190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM  269 (467)
T ss_pred             eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC
Confidence            222 335689999999999999999999999999986532 2         111111111    1345677889999987


Q ss_pred             CC-cceeEEEEccCCcH---HHHHHHHHhh----cc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768          236 MM-GWRVGYIAYPSEVE---GFATQLLKVQ----DN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       236 ~~-g~~~G~i~~~~~~~---~~~~~l~~~~----~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      +| |   |++++++  +   ++.++.+...    .. +..+.+.-.+.+++..|.+..+  ..+.+.-....++|.+.|.
T Consensus       270 ApvG---g~Lag~d--~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~--~~yl~~ri~qv~yl~~~L~  342 (467)
T TIGR02617       270 VPMG---GLLCFKD--DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRINQVQYLVNGLE  342 (467)
T ss_pred             Cccc---ceEEecc--hhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhccc--HHHHHHHHHHHHHHHHHHH
Confidence            55 4   6677776  5   5555544321    11 2234666677777777775321  2333333445567777777


Q ss_pred             cCCCCcccCCCCceEEEee-------CCCCCCCHHHHHHHHHHhcCeEEeC-CCcc-C---------C--CCeEEEEecc
Q 015768          307 PLGEGAVKGGEGAIYLWAR-------LPEKHLDDFEVVRWLAHRHGVVVIP-GGAC-G---------C--RGHLRISFGG  366 (400)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~-~---------~--~~~iRi~~~~  366 (400)
                      +.|. .+.. .+|.-++++       +|.....+..++.+|..+.||--.. |+.. +         .  -..+|+++.+
T Consensus       343 ~~Gv-pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipR  420 (467)
T TIGR02617       343 EIGV-VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPR  420 (467)
T ss_pred             hCCC-cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecccc
Confidence            7665 3333 456666554       2222235778888888899988532 3321 1         0  1479999886


Q ss_pred             --CCHHHHHHHHHHHHHHHHH
Q 015768          367 --LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       367 --~~~~~~~~~~~~l~~~l~~  385 (400)
                        -|.+-++..++++....++
T Consensus       421 rvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       421 ATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             ccccHhHHHHHHHHHHHHHhh
Confidence              6788888888888777665

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.66  E-value=5.8e-13  Score=129.61  Aligned_cols=341  Identities=12%  Similarity=0.051  Sum_probs=220.0

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC----------
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA----------  112 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~----------  112 (400)
                      +.++.++..+...+.+++...|..++....+++++.+++.+..|.+...-.+|+|||.|+..++.+.++.          
T Consensus        94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~  173 (608)
T TIGR03811        94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEV  173 (608)
T ss_pred             CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence            3566777777777777666667677788999999999999999987667779999999999777664320          


Q ss_pred             ------------------------------------------C------CEEEEeCCCccchhHHHHhcCc---EEEEec
Q 015768          113 ------------------------------------------G------DSVVMFAPYYFNSYMSFQMTGV---THILVG  141 (400)
Q Consensus       113 ------------------------------------------g------d~vlv~~p~~~~~~~~~~~~g~---~~~~~~  141 (400)
                                                                |      -+++++.-.|+++..++..+|+   +++.+ 
T Consensus       174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V-  252 (608)
T TIGR03811       174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV-  252 (608)
T ss_pred             cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe-
Confidence                                                      0      0578888889999999999998   58888 


Q ss_pred             cCCCCCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC--EEEEcccccccc---cC
Q 015768          142 PCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS--WLVVDNTYEYFM---YD  212 (400)
Q Consensus       142 ~~~~~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~--~li~D~a~~~~~---~~  212 (400)
                      |+++++ .+|++.|++.|.    .+..+-+|+-+.++..+|.+-|.+++.+|++.++++|+  |+++|.||+++.   +-
T Consensus       253 pvD~~~-rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~  331 (608)
T TIGR03811       253 PVDSNY-RMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFL  331 (608)
T ss_pred             ecCCCC-cCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhc
Confidence            888664 799999999886    22223455666778999999995555555555578898  699999999753   10


Q ss_pred             C-C----Ccc---------------------------ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          213 G-R----KHC---------------------------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       213 ~-~----~~~---------------------------~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      . .    +..                           ..-...+-+.-.+||++. ....+|.++.++  +.+.+.+...
T Consensus       332 ~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd--~~~~~~~~~~  408 (608)
T TIGR03811       332 DEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQD--IRMRDVISYF  408 (608)
T ss_pred             cccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeC--HHHHHHHhcC
Confidence            1 0    000                           000234556678999985 667899999887  4544443221


Q ss_pred             hc-------c-------CCcCc-----cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC------CCc---
Q 015768          261 QD-------N-------IPICA-----SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG------EGA---  312 (400)
Q Consensus       261 ~~-------~-------~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~---  312 (400)
                      ..       .       .....     ..+..++....+-.+.+.+.++..+..++++++.+.|+..+      .+.   
T Consensus       409 a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~  488 (608)
T TIGR03811       409 ATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHP  488 (608)
T ss_pred             cchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEe
Confidence            00       0       01111     13444455555533556788999999999999999998742      233   


Q ss_pred             ccCCCCceEEEeeCCCCCCC----HHHHHHHHHHhcC----------eEEeCCCcc---------------CCC------
Q 015768          313 VKGGEGAIYLWARLPEKHLD----DFEVVRWLAHRHG----------VVVIPGGAC---------------GCR------  357 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~g----------i~v~~g~~~---------------~~~------  357 (400)
                      +.+|+ .+.+++++.....+    ..++-+++.+...          +.+......               +..      
T Consensus       489 ~~~pd-lniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~  567 (608)
T TIGR03811       489 LTKPD-FNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQR  567 (608)
T ss_pred             cCCCC-cceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhcc
Confidence            34454 55566665322222    2233333332211          112111000               000      


Q ss_pred             ----CeEEEEecc---CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          358 ----GHLRISFGG---LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       358 ----~~iRi~~~~---~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                          ..+|-++..   .+.+-++..+..|++++.+..++
T Consensus       568 ~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~~~  606 (608)
T TIGR03811       568 AGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKLEK  606 (608)
T ss_pred             CCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHHHh
Confidence                257777553   45588899999999998876653

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.64  E-value=2.1e-13  Score=128.40  Aligned_cols=299  Identities=16%  Similarity=0.145  Sum_probs=187.8

Q ss_pred             HHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--C--CCCC
Q 015768           76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--T--LHPD  151 (400)
Q Consensus        76 ~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~  151 (400)
                      +..++.++.+|. ....++++|+|.|+..++.+++++||.|+++.+||-+....+-..|+.++++.|....  |  ..++
T Consensus        74 eAqe~aA~~fgA-d~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~  152 (557)
T COG1982          74 EAQELAARVFGA-DHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIP  152 (557)
T ss_pred             HHHHHHHHHhCC-CceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCC
Confidence            334444444464 2456778999999999999999999999999999999999999999999998443322  2  3678


Q ss_pred             HHHHHHhhccCCCC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCC-CccccCCCcEEEEe
Q 015768          152 ADWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGR-KHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~~~~~~-~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~-~~~~~~~~~~i~~~  228 (400)
                      .+.+++.+..++.. |++++++|+. .|.+.+   +++|.+.+++.++|+.+|+++..... .+. +......+.++++-
T Consensus       153 ~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tq  228 (557)
T COG1982         153 LETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQ  228 (557)
T ss_pred             HHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEe
Confidence            99999988766656 8899888765 799999   88999999999999999999873322 111 11223367889999


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC-CcCccHHHHHHHHH---HhcC-CcHHHHHHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALY---SLQT-GPEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~---~l~~-~~~~~~~~~~~~~~~~~~l~~  303 (400)
                      |.||.++ +.....++..+++..--.+++..+.... +.+++.+..+.+..   .... +....+...+..-..++.+++
T Consensus       229 S~HK~l~-alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~  307 (557)
T COG1982         229 STHKLLA-ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRR  307 (557)
T ss_pred             chhhhhh-hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999985 3333455555531011123444333222 33344333332222   1111 112222334555556666666


Q ss_pred             HhccCCCCcccCCCC---------------------ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEE
Q 015768          304 ALSPLGEGAVKGGEG---------------------AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI  362 (400)
Q Consensus       304 ~L~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi  362 (400)
                      ..+..+++.+..+..                     ..-+.+..|+.+..+..+..+|. ++||...-...+  ..-+-+
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~-e~gii~e~~~d~--~~lll~  384 (557)
T COG1982         308 LINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLR-EHGIIPEETGDY--SNLLLF  384 (557)
T ss_pred             HHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHH-HcCCeeeecCCc--eeeEEe
Confidence            666666544433321                     12234555666678888998885 778776543211  122333


Q ss_pred             EeccCCHHHHHHHHHHHHHHHHHH
Q 015768          363 SFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++   ..+....++.|.++.+.+
T Consensus       385 ~~~---~gk~~~lv~~L~~f~r~~  405 (557)
T COG1982         385 SPG---IGKWQTLVDRLLEFKRRY  405 (557)
T ss_pred             eec---cchHHHHHHHHHHHHHhh
Confidence            333   256666777777777743

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.58  E-value=9.5e-13  Score=116.33  Aligned_cols=262  Identities=18%  Similarity=0.147  Sum_probs=150.1

Q ss_pred             HHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEe---CChHHHHHHHHHHhcCCCCEEEE
Q 015768           46 KMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVM  118 (400)
Q Consensus        46 ~~v~~a~~~~~~~----~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~---~g~t~a~~~~~~~l~~~gd~vlv  118 (400)
                      ..|++|+.+.--.    ....+|+..   +.=|+.+.+-+++.++.  ++-++-   -++|+|+..++.++++|||+++.
T Consensus        27 ~KVL~Af~~~~vs~~hf~~tTGYGY~---D~GRd~le~iyA~vfga--E~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~  101 (403)
T PF06838_consen   27 LKVLKAFQENRVSDSHFAGTTGYGYD---DIGRDKLERIYADVFGA--EDALVRPQFVSGTHAIALALFGVLRPGDELLS  101 (403)
T ss_dssp             HHHHHHHHHTT--GGGCS---TT-TT----HHHHHHHHHHHHHCT---SEEEEETTS-SHHHHHHHHHHHH--TT-EEEE
T ss_pred             HHHHHHHHHcCCChhhcCCCCcCCCC---CccHHHHHHHHHHHhCc--hhhhhcccccchHHHHHHHHHhcCCCCCeEEE
Confidence            5677777654332    124455532   23455555555555564  333332   46889999999999999999884


Q ss_pred             -eCCCccchhHHH----------HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHH
Q 015768          119 -FAPYYFNSYMSF----------QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLL  186 (400)
Q Consensus       119 -~~p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l  186 (400)
                       +..-|....+.+          +..|+....+ |+.++| .+|.|.+++.+++++  |+|+|. +....+-..++.++|
T Consensus       102 ~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v-~L~~dg-~~D~~~i~~~~~~~t--k~v~IQRSrGYs~R~sl~i~~I  177 (403)
T PF06838_consen  102 ITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV-PLTEDG-TIDWEAIKKALKPNT--KMVLIQRSRGYSWRPSLTIEEI  177 (403)
T ss_dssp             SSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE---B-TTS-SB-HHHHHHHHHTTE--EEEEEE-S-TTSSS----HHHH
T ss_pred             cCCCchhhHHHHhCCCCCCCCChHHhCceeEEE-eecCCC-CcCHHHHHHhhccCc--eEEEEecCCCCCCCCCCCHHHH
Confidence             555576665554          5667888999 888877 689999999999766  999998 334444456898999


Q ss_pred             HHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc--eeEEEEccCCcHHHHHHHHHhhc
Q 015768          187 KRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQLLKVQD  262 (400)
Q Consensus       187 ~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--~~G~i~~~~~~~~~~~~l~~~~~  262 (400)
                      +++.+.+++  .++++++|++|++|.-...|   ...+.+++.+|+-|..| +|+  -.|||+++   ++++++......
T Consensus       178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP---~~vGADl~aGSLIKNpG-GgiAptGGYIaGr---~~lVe~~a~RLT  250 (403)
T PF06838_consen  178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEP---TEVGADLMAGSLIKNPG-GGIAPTGGYIAGR---KDLVERAAYRLT  250 (403)
T ss_dssp             HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G---GGGT-SEEEEETTSGGG-TTT-SS-EEEEES---HHHHHHHHHHHS
T ss_pred             HHHHHHHHhhCCCeEEEEeCCcceeccccCc---cccchhheeccceeCCC-CCccCcCCEEech---HHHHHHHHhhhc
Confidence            999998875  48999999999998754433   34467799999999986 443  35999999   888887654322


Q ss_pred             cCC----cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCC
Q 015768          263 NIP----ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLP  327 (400)
Q Consensus       263 ~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~  327 (400)
                      .-.    .+++.-...   ..++ +.=..+++..+..+-+......+++++.   ..+..+.+-....+.+.
T Consensus       251 aPGiG~e~G~t~~~~R---~~~Q-GlFlAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~  318 (403)
T PF06838_consen  251 APGIGKEVGATLGTNR---LMFQ-GLFLAPHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELG  318 (403)
T ss_dssp             -TTTGGGSS--TTTHH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-S
T ss_pred             CCccccccccCcchHH---HHHh-HHhhchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECC
Confidence            100    111100011   1111 1111256665666666666677777776   22233444566777776

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.57  E-value=4.5e-12  Score=113.86  Aligned_cols=344  Identities=15%  Similarity=0.101  Sum_probs=219.7

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCC-hHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAG-ANQAFV  103 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g-~t~a~~  103 (400)
                      =+..+++|++..+-+.+.-+..-+-...+.+  +..|.+.   +|..++...+.+||.+.-|.  |.|-+.+. +.++=.
T Consensus        64 vd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~--iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~--DavsLQP~AGAqGE~  139 (496)
T COG1003          64 VDRGMIPLGSCTMKLNPKAEMKPATWPEFAN--IHPFQPEEQVQGYLELIYELQEWLKEITGM--DAVSLQPNAGAQGEY  139 (496)
T ss_pred             cccCccCCcccccccCchhhcccccccchhh--cCCCCChHHHHHHHHHHHHHHHHHHHhcCC--ceeeccCCCCcchhh
Confidence            3577888888776664333333222222222  5556554   66778888899999887775  45666533 333322


Q ss_pred             ---HHHHHhc-CC----CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768          104 ---NIVLTLC-DA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus       104 ---~~~~~l~-~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                         .+++... ..    .+.+|+++..|..-.-.+...|++++.| +.+++| .+|+|+|++.+.++.  .++.|++||.
T Consensus       140 aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V-~~~~~G-~VDlddLk~k~~~~~--AalMiTnPsT  215 (496)
T COG1003         140 AGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVV-KCDENG-NVDLDDLRAKAEDNL--AALMITNPST  215 (496)
T ss_pred             HHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEE-ecCCCC-CccHHHHHHHhccce--eEEEeccCcc
Confidence               3333332 22    2579999999987777788899999999 898887 789999999998766  8999999876


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcH
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVE  251 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~  251 (400)
                       .|..  .+.+.+|+++.+++|..+..|.+-..-..+..  ...+.+.+++=..++|.|+.    +|...|=|..+   .
T Consensus       216 -~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~--rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk---~  287 (496)
T COG1003         216 -LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGLA--RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVK---A  287 (496)
T ss_pred             -cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhccc--cccccccceEEeecccccccCCCCCCCCCCceehH---h
Confidence             3443  45699999999999999999999765444332  22334566777789999932    35556667666   3


Q ss_pred             HHHHHHHHh----h----------------ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          252 GFATQLLKV----Q----------------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       252 ~~~~~l~~~----~----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      .+...+..-    .                ....++.......+..-.+.-+.+.+++..+...-+++++...|++.-.+
T Consensus       288 ~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~  367 (496)
T COG1003         288 HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPV  367 (496)
T ss_pred             hccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCcc
Confidence            333322210    0                00112222222222222222245667788888888999999999974222


Q ss_pred             cccCCC-CceEEEeeCC----CCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          312 AVKGGE-GAIYLWARLP----EKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       312 ~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      .+.+.. ...=++++..    ..+.+..+++.+|+ ++|+.--. .+|-  -.+.+-|-+.- .+.+++|+.++++.+..
T Consensus       368 ~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLl-D~GfHaPT-~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~  445 (496)
T COG1003         368 PYTGENRVAHECILDARPLKKETGVRALDVAKRLL-DYGFHAPT-MYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIR  445 (496)
T ss_pred             ccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHH-hcCCCCCc-ccCccccccceeecCCCCCCHHHHHHHHHHHHHHH
Confidence            222221 1222333333    23457889999998 89988633 3332  46777777665 68889999999988888


Q ss_pred             HHHhcc
Q 015768          384 EELVKD  389 (400)
Q Consensus       384 ~~~~~~  389 (400)
                      ++..+.
T Consensus       446 ~Ea~~~  451 (496)
T COG1003         446 EEADAV  451 (496)
T ss_pred             HHHHhc
Confidence            776543

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.53  E-value=1.3e-11  Score=108.38  Aligned_cols=361  Identities=16%  Similarity=0.104  Sum_probs=226.2

Q ss_pred             hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHh----hcC
Q 015768           13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQ----ENK   86 (400)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~----~~~   86 (400)
                      ..+...+.=+.+..+++..-|.|-..++..  +..|++++-..+.+...-+|+..  .|=.++.+.+....++    .++
T Consensus        23 ~~DPev~~ii~~Ek~RQ~~gieLIaSENFt--s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~  100 (477)
T KOG2467|consen   23 EVDPEVHDIIEKEKERQKRGIELIASENFT--SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG  100 (477)
T ss_pred             hcChHHHHHHHHHHHhhhcceeEeecccch--HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC
Confidence            344444555555677777778887766553  58899999988877444444321  2233455555444433    357


Q ss_pred             CCCC--cEEEe-CChHHHHHHHHHHhcCCCCEEEE---eCCCccc--hhHHHHhcCc-----EEEEeccCCCCCCCCCHH
Q 015768           87 LYKS--SVMVT-AGANQAFVNIVLTLCDAGDSVVM---FAPYYFN--SYMSFQMTGV-----THILVGPCSSKTLHPDAD  153 (400)
Q Consensus        87 ~~~~--~i~~~-~g~t~a~~~~~~~l~~~gd~vlv---~~p~~~~--~~~~~~~~g~-----~~~~~~~~~~~~~~~~~e  153 (400)
                      ++++  -|-+. -+++-|+..+..++++|+|+|.-   ++.+|-+  +..--+...+     +-.++ .+++...-+|-|
T Consensus       101 ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPY-kv~~~TG~IDYD  179 (477)
T KOG2467|consen  101 LDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPY-KVDPSTGYIDYD  179 (477)
T ss_pred             CCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCce-eeCCCCCceehH
Confidence            7653  23222 34569999999999999999974   3444422  2211122222     11223 356565678999


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA  233 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~  233 (400)
                      .|++....-. ||+|+.-  ....-+.++   -.++.++|.+-|.+++.|.+|...............-.+|++.+.+|+
T Consensus       180 ~Le~~A~~fr-Pk~iiaG--~SaY~R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKs  253 (477)
T KOG2467|consen  180 KLEKTATLFR-PKLIIAG--TSAYSRLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKS  253 (477)
T ss_pred             HHHHHHHhcC-CcEEEec--cccchhhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccccc
Confidence            9998655322 5877633  233446778   555555666889999999999755544333333334467899999998


Q ss_pred             cCCCcceeEEEEccCCcH------------HHHHHHHHhh-ccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHH
Q 015768          234 YGMMGWRVGYIAYPSEVE------------GFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNRE  299 (400)
Q Consensus       234 ~g~~g~~~G~i~~~~~~~------------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~  299 (400)
                      +  .|.|.|.|..+...+            ++-++++..- .....++....+.+++.+|.+ ....++.+.++..+|+.
T Consensus       254 L--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nak  331 (477)
T KOG2467|consen  254 L--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAK  331 (477)
T ss_pred             c--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            7  688999988775211            1222222211 112233444555555566664 33567899999999999


Q ss_pred             HHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc-----CCH
Q 015768          300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG-----LVE  369 (400)
Q Consensus       300 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~-----~~~  369 (400)
                      .|.+.|.+.+.--+.+......+.+++.....++..+ +..++.-+|.+.--..++     .|+.+|++...     .-+
T Consensus       332 ala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarv-E~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e  410 (477)
T KOG2467|consen  332 ALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARV-EKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGE  410 (477)
T ss_pred             HHHHHHHHcCceEecCCccceEEEEeccccCCchHHH-HHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccH
Confidence            9999999998855666666777778888777676544 345556677775444443     48899998543     356


Q ss_pred             HHHHHHHHHHHHHHHH
Q 015768          370 DDCKAAADRLRRGLEE  385 (400)
Q Consensus       370 ~~~~~~~~~l~~~l~~  385 (400)
                      +|+++..+-|.++++-
T Consensus       411 ~df~~v~~fi~~av~i  426 (477)
T KOG2467|consen  411 EDFEKVADFIDRAVKI  426 (477)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8888888887777753

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.49  E-value=5.6e-11  Score=119.92  Aligned_cols=328  Identities=12%  Similarity=0.086  Sum_probs=204.0

Q ss_pred             HHHHHHHhcCCCeEEc-CCCCCCCCCcHHHHHHHHHhhc-CCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768           20 VQIQELVRGAKNAVSL-AQGVVYWQPPKMAMEKVKELVW-DPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVT   95 (400)
Q Consensus        20 ~~~~~~~~~~~~~i~~-~~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~   95 (400)
                      ..+.++-+....+..| +.|.-+.-.|+.+.+.+.+.-. -....+|.+  ++|.-+..=.+...+.++.|++..+.-+.
T Consensus        53 ~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~  132 (939)
T TIGR00461        53 AHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLL  132 (939)
T ss_pred             HHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhcc
Confidence            4444444444444344 3444333456666656654322 112445543  24444444445555666679988888899


Q ss_pred             CChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768           96 AGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV  168 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v  168 (400)
                      .++|++-+.++.+..   +++++|+|++..|+.....++    ..|++++.+          ++++|+..+  ++  .++
T Consensus       133 d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~~--~~v  198 (939)
T TIGR00461       133 DEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--DV--FGC  198 (939)
T ss_pred             chhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--CE--EEE
Confidence            999999998887753   234899999999988886665    678888877          344555544  23  677


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEE
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYI  244 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i  244 (400)
                      ++++|++ .|.+.+   +++|.++++++|.+++++.-...+..   ...+.+.+.||++++ +|.||.    +|.-.|++
T Consensus       199 ~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~~ad~~al~l---l~~Pge~GaDi~vg~-~q~fg~p~g~GGP~aG~~  270 (939)
T TIGR00461       199 LLQYPAT-DGSILD---YKQLIDALHSHKSLVSVAADLMALTL---LTPPGHYGADIVLGS-SQRFGVPMGYGGPHAAFF  270 (939)
T ss_pred             EEECCCC-CeEEec---HHHHHHHHHHcCCEEEEEechHHhCC---cCCHHHcCCcEEeeC-CCccCCCCCCCCCceeee
Confidence            7888865 788877   99999999999999999543332211   122234466777654 444433    35558888


Q ss_pred             EccCCcHHHHHHHHHh-------------------------hc---cCCcC-ccHHHHHHHHHHhc-CCcHHHHHHHHHH
Q 015768          245 AYPSEVEGFATQLLKV-------------------------QD---NIPIC-ASIISQHLALYSLQ-TGPEWVTERVKDL  294 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~-------------------------~~---~~~~~-~~~~~~~~~~~~l~-~~~~~~~~~~~~~  294 (400)
                      .++   +++...+...                         ++   ..+.+ .+.+...++..++. .+.+.+++..++.
T Consensus       271 a~~---~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~  347 (939)
T TIGR00461       271 AVK---DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRI  347 (939)
T ss_pred             eec---HhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence            888   4554443210                         00   00111 11222222222223 3556678888889


Q ss_pred             HHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHH
Q 015768          295 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK  373 (400)
Q Consensus       295 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~  373 (400)
                      ..++.++.+.|++.+. ++..+.-..-+.++++.  .+.+++.+.++ ++||.++..    ..+.+++|+.- +|++|++
T Consensus       348 ~~~a~~l~~~L~~~G~-~~~~~~fF~~~~v~~~~--~~~~~i~~~~~-~~gi~l~~~----~~~~i~~s~~E~~t~~di~  419 (939)
T TIGR00461       348 HSLTSILANGLENDPH-ELINKTWFDTLTVKVGN--GISSELLKAAE-EFNINLRAV----DTTTVGIALDETTTKADVE  419 (939)
T ss_pred             HHHHHHHHHHHHhCCC-cccCCCccceEEEEeCC--CCHHHHHHHHH-HCCCeeeec----CCCEEEEEeecCCCHHHHH
Confidence            9999999999999664 54443212224445532  24678888776 789998762    34689999988 8999999


Q ss_pred             HHHHHHH
Q 015768          374 AAADRLR  380 (400)
Q Consensus       374 ~~~~~l~  380 (400)
                      .+++.+.
T Consensus       420 ~l~~~~~  426 (939)
T TIGR00461       420 NLLKVFD  426 (939)
T ss_pred             HHHHHhc
Confidence            9999885

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.45  E-value=1.1e-10  Score=105.96  Aligned_cols=304  Identities=15%  Similarity=0.139  Sum_probs=205.4

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcE-EEeCChHHHHHHHHHHhc----C-CC---CEEEEeCCCccchhHHHHhcCcEEE
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSV-MVTAGANQAFVNIVLTLC----D-AG---DSVVMFAPYYFNSYMSFQMTGVTHI  138 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i-~~~~g~t~a~~~~~~~l~----~-~g---d~vlv~~p~~~~~~~~~~~~g~~~~  138 (400)
                      ++...+..+..+.+...++.+++.+ ..|.|+|+++..+-....    . .|   ..++.+...|.++....+..++++.
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~  195 (491)
T KOG1383|consen  116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELR  195 (491)
T ss_pred             chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEE
Confidence            5667888899999988887665432 446788888555544431    1 12   3688888888888888999999999


Q ss_pred             EeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcccccccccC-CCC-
Q 015768          139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTYEYFMYD-GRK-  215 (400)
Q Consensus       139 ~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~-~~~~li~D~a~~~~~~~-~~~-  215 (400)
                      .+ |+++..+.+|+..+.+.+++++  ..++...|+.|+|..-+   +++|.++..+ +++.+++|.+-+.|... +.. 
T Consensus       196 ~V-~~~~~~~~~D~~k~~~~i~eNt--i~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~  269 (491)
T KOG1383|consen  196 EV-PLDEGDYRVDPGKVVRMIDENT--IMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGFINPAGYLN  269 (491)
T ss_pred             ee-eccccceEecHHHHHHHhccce--EEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccccccccccC
Confidence            99 9998889999999999999887  88888899999999888   8888888778 99999999999988763 111 


Q ss_pred             c-cccC-CCcEE-EEeccccccCCCcceeEEEEccCCcHHH-HHHH-------HHhhccCCcC-----ccHHHHHHHHHH
Q 015768          216 H-CCVE-GDHVV-NLFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQL-------LKVQDNIPIC-----ASIISQHLALYS  279 (400)
Q Consensus       216 ~-~~~~-~~~~i-~~~s~sK~~g~~g~~~G~i~~~~~~~~~-~~~l-------~~~~~~~~~~-----~~~~~~~~~~~~  279 (400)
                      . ..+. ...+. ...+.|| +|+..-..||++-++  +++ ..++       .......+.+     ....++++.  .
T Consensus       270 ~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~--k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~--~  344 (491)
T KOG1383|consen  270 EEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRN--KELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAA--L  344 (491)
T ss_pred             ccccccCCCCceeEeeccce-eeeeecCcEEEEEcc--cccccceEEEeccccCccccCcccccCCcccHHHHHHHH--H
Confidence            1 1111 12222 2234466 455545579988876  222 1221       1111112222     233444443  3


Q ss_pred             hcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCe
Q 015768          280 LQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH  359 (400)
Q Consensus       280 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~  359 (400)
                      +..+++...+..+++.+....+++.+++++.+.+++.  ..+.++-+.....+..++.+.| ++.|..+..-.   .|..
T Consensus       345 ~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--p~vs~~~~~s~~~~i~elsd~l-~~~GW~lnalq---~P~a  418 (491)
T KOG1383|consen  345 MSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--PLVSFILFGSNDVNIFELSDLL-RKKGWILNALQ---FPAA  418 (491)
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--CcEEEEEccCCccchhhhhHHH-HhcCcCccccC---CCCc
Confidence            4445677788899999999999999999888777765  2333333444334566777755 58898885433   2334


Q ss_pred             EEEEecc--CCHHHHHHHHHHHHHHHHHHhc
Q 015768          360 LRISFGG--LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       360 iRi~~~~--~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +-+++..  ..++-.++++..+.++++++..
T Consensus       419 ~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~  449 (491)
T KOG1383|consen  419 IHICVTRVHAREDVADRFVADIRKVVEELKS  449 (491)
T ss_pred             eEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence            4555443  3444467888888888888764

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=99.42  E-value=2.5e-11  Score=103.87  Aligned_cols=330  Identities=15%  Similarity=0.127  Sum_probs=199.8

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEeC
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGDSVVMFA  120 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~---~~gd~vlv~~  120 (400)
                      -+|+|+++..+.+..-..+...-   .+++.+-..+..+..-+  -+-++|++++++|+..+++...   +..| |++.+
T Consensus        62 chp~VV~A~~kQmat~~tN~RFl---hd~lv~cA~~l~stlPe--Lsvc~F~NSGSEANDLALRLAR~ftkhqD-vItld  135 (452)
T KOG1403|consen   62 CHPEVVRAGAKQMATISTNNRFL---HDELVQCARTLTSTLPE--LSVCFFVNSGSEANDLALRLARNFTKHQD-VITLD  135 (452)
T ss_pred             CCHHHHHHHHHHHhHhcccchhh---HHHHHHHHHHHhhcCCC--ceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEe
Confidence            57999999888776422111101   22333333333322212  3567899999999999998864   3434 55556


Q ss_pred             CCccchhHHH-Hh------cC--c---EEEEeccCCC--CC-----C-------CCCHHHHHHhhc----cCCCCeEEEE
Q 015768          121 PYYFNSYMSF-QM------TG--V---THILVGPCSS--KT-----L-------HPDADWLEKTLE----TKPTPKLVSV  170 (400)
Q Consensus       121 p~~~~~~~~~-~~------~g--~---~~~~~~~~~~--~~-----~-------~~~~e~l~~~l~----~~~~~~~v~l  170 (400)
                      ..|+++.... +.      .|  .   +.+.+-|.++  .|     .       ..-.+.+++.+.    ....+.+.+-
T Consensus       136 HAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiA  215 (452)
T KOG1403|consen  136 HAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIA  215 (452)
T ss_pred             chhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHH
Confidence            6776765432 11      01  1   2222213221  00     0       112345555544    3332344444


Q ss_pred             eCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC-CCcEEEEeccccccCCCcceeEEEEccC
Q 015768          171 VNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       171 ~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      ..-+...|.++ |.+..+++++..+.+|-..|.||++-+|..-|..++... .+...-+-++.|.+| .|-+++.++.. 
T Consensus       216 EslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG-NGhPVa~Vatt-  293 (452)
T KOG1403|consen  216 ESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG-NGHPVAAVATT-  293 (452)
T ss_pred             HHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC-CCCeeeEEecc-
Confidence            45677788765 566899999999999999999999998887666655543 333233446779998 99999999999 


Q ss_pred             CcHHHHHHHHH--hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-Ccc---cCCCCceEE
Q 015768          249 EVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAV---KGGEGAIYL  322 (400)
Q Consensus       249 ~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~---~~~~~~~~~  322 (400)
                        +++.+.+..  .....+++.|+.+..+..+.+...++  +.......+..+.|...|+.+.. ..+   ++.. |.|+
T Consensus       294 --keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~--E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGv-GLFi  368 (452)
T KOG1403|consen  294 --KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED--ENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGV-GLFI  368 (452)
T ss_pred             --HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHhhhccceeccccc-eEEE
Confidence              899888865  33456888999999988888875321  33344445555555555554321 122   2222 6777


Q ss_pred             EeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          323 WARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       323 ~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      -+++-...       ..+.-+..+|.+.++|++..-.+  ..+-+.|-+.. .++++.++.+..|.+.+.-+.+
T Consensus       369 GIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~iLT~mee  440 (452)
T KOG1403|consen  369 GIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDEILTVMEE  440 (452)
T ss_pred             eeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHHHHHHHHH
Confidence            66653221       12334555677778899864321  35667776443 6788899999998888885544

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=99.40  E-value=1.3e-10  Score=105.39  Aligned_cols=319  Identities=13%  Similarity=0.087  Sum_probs=202.1

Q ss_pred             CCCCCCcHHHHHHHHHHHHhhcCCCC---------CcEEEeCChHHHHHHHHHHhc-------CCC------------CE
Q 015768           64 YGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLC-------DAG------------DS  115 (400)
Q Consensus        64 y~~~~g~~~~~~~~a~~l~~~~~~~~---------~~i~~~~g~t~a~~~~~~~l~-------~~g------------d~  115 (400)
                      +-..+..++++..+.+|+.+..++|.         .--++..+++++...++.+..       +.+            -.
T Consensus       105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV  184 (511)
T KOG0628|consen  105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLV  184 (511)
T ss_pred             eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhhe
Confidence            33556788999999999999877642         223455566677777766642       111            13


Q ss_pred             EEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE--EEeCCCCCCccCCCHHHHHHHHHHH
Q 015768          116 VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV--SVVNPGNPSGTYIPERLLKRISDLC  193 (400)
Q Consensus       116 vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v--~l~~p~nptG~~~~~~~l~~i~~l~  193 (400)
                      +..++-+|.++..+....|++...+ +.+. ++.++.+.|.+++.++.....|  +++ .+--|-....-+++.+|..+|
T Consensus       185 ~Y~SDqahssveka~~i~~VklR~l-~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~-at~GTT~~ca~D~l~elg~Vc  261 (511)
T KOG0628|consen  185 AYCSDQAHSSVEKACLIAGVKLRAL-PTDE-NFGMRGDTLRKAIEEDIARGLIPFFVC-ATLGTTSSCAFDELEELGPVC  261 (511)
T ss_pred             EEecCcccchHHHhHhhcceeEEEe-eccc-CcCCCHHHHHHHHHHHHhCCCccEEEE-EeecCccccccccHHHhcchh
Confidence            5677888888888888889998888 8776 7889999999999843211221  222 122222334556799999999


Q ss_pred             HHcCCEEEEcccccccccCCCCccccCC---CcEEEEeccccccCCCcceeEEEEccCCc---------HHHHHH--HHH
Q 015768          194 KAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLFSFSKAYGMMGWRVGYIAYPSEV---------EGFATQ--LLK  259 (400)
Q Consensus       194 ~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~g~~~G~i~~~~~~---------~~~~~~--l~~  259 (400)
                      +++|+|+++|.+|++..+.-+.+.....   ..+-+-...||++ +--+.+..+-.++.+         +...+.  ...
T Consensus       262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~  340 (511)
T KOG0628|consen  262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS  340 (511)
T ss_pred             hhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhhee-EEeeeeecceeecCceeeeeeecChHhhcchhhcc
Confidence            9999999999999965554332222111   1123344557766 233333333222210         111111  111


Q ss_pred             hhccCCcC------ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          260 VQDNIPIC------ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       260 ~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      ......+.      --.+-.+.....+  +.+.++++++++.++++.+.+.+.+-+-+++..+..--.+++++.......
T Consensus       341 ~~Dyrhwqipl~rRfRSLKlWfv~R~~--Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~n  418 (511)
T KOG0628|consen  341 APDYRHWQIPLGRRFRSLKLWFVLRSY--GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEIN  418 (511)
T ss_pred             CCCccccccccccchhhHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHHH
Confidence            11111111      1122233333333  346678888888888888888888776667776665566777887655557


Q ss_pred             HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      +++..++-....|.+.|.. .++.-.||++++.  ++.+|++++.+.|.+....+.++
T Consensus       419 e~Ll~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~  475 (511)
T KOG0628|consen  419 EALLNRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA  475 (511)
T ss_pred             HHHHHHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence            7888888777788888755 2345579999887  78899999999999999886654

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.38  E-value=2.8e-10  Score=103.01  Aligned_cols=221  Identities=14%  Similarity=0.090  Sum_probs=158.3

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEE-----
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVV-----  117 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vl-----  117 (400)
                      .++++++++.+.+.+.....|.-..+.  ..+.+...-....+++ .+.++++++.+.|+..++.++..++..|+     
T Consensus        39 ~~~e~iea~~~~~~~~v~Le~~l~~g~--~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~l  116 (395)
T COG1921          39 YSPEAIEAMKEAMRAPVELETDLKTGK--RGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGEL  116 (395)
T ss_pred             CCHHHHHHHHHHhcccceeeeecccch--hhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccc
Confidence            579999999999887654444333322  2222222211222444 68899999999999999999988656553     


Q ss_pred             EeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHHHHH
Q 015768          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT--YIPERLLKRISDLCKA  195 (400)
Q Consensus       118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~--~~~~~~l~~i~~l~~~  195 (400)
                      +. ++++++.++++..|++.+.+ -...   ..+..+++.++.+++  ++++=++-+|- |.  ..+   ++++++++++
T Consensus       117 V~-gg~~~v~d~~~~aG~~l~Ev-G~tn---~t~~~d~~~AIne~t--a~llkV~s~~~-~f~~~l~---~~~l~~ia~~  185 (395)
T COG1921         117 VE-GGAFRVPDIIRLAGAKLVEV-GTTN---RTHLKDYELAINENT--ALLLKVHSSNY-GFTGMLS---EEELVEIAHE  185 (395)
T ss_pred             cc-CCCCChhHHHHHcCCEEEEe-cccC---cCCHHHHHHHhccCC--eeEEEEeeccc-ccccccc---HHHHHHHHHH
Confidence            44 68889999999999999988 3221   347889999999887  66655544442 33  345   7888999999


Q ss_pred             cCCEEEEcccccccccCCC-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHH
Q 015768          196 AGSWLVVDNTYEYFMYDGR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH  274 (400)
Q Consensus       196 ~~~~li~D~a~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (400)
                      +|+++++|.+.+......+ .......+.+++++|..|.+|  |.+.|.|+++   ++++++++...-............
T Consensus       186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~Gk---KelI~~lq~~~l~Ralrv~K~tla  260 (395)
T COG1921         186 KGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGK---KELIEKLQSHPLKRALRVDKETLA  260 (395)
T ss_pred             cCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcC--CCccceEech---HHHHHHHHhhhhhhhhhcCcHhHH
Confidence            9999999999876533111 112234577899999999996  7789999999   899999987766667777777777


Q ss_pred             HHHHHhcC
Q 015768          275 LALYSLQT  282 (400)
Q Consensus       275 ~~~~~l~~  282 (400)
                      ++.++|+.
T Consensus       261 ~l~~aLe~  268 (395)
T COG1921         261 ALEAALEL  268 (395)
T ss_pred             HHHHHHHH
Confidence            77777764

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.37  E-value=1.5e-10  Score=107.27  Aligned_cols=289  Identities=17%  Similarity=0.179  Sum_probs=159.5

Q ss_pred             CCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHHh---
Q 015768           61 ISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQM---  132 (400)
Q Consensus        61 ~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~---  132 (400)
                      ..+|.+  ++|.-+..-++...+.++.|++.-+.-+..++|.+-+.++.+..   +.+++|+++...|+.+...++.   
T Consensus        97 YtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~  176 (429)
T PF02347_consen   97 YTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAA  176 (429)
T ss_dssp             -STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhh
Confidence            345544  34444444455555677778876556677888888887776653   3346999999999998876644   


Q ss_pred             -cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768          133 -TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY  211 (400)
Q Consensus       133 -~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~  211 (400)
                       .|++++.+ +.++.+. .|        .++  ..+|++++|++ .|.+-+   +++|.++++++|.++++ .+.- ...
T Consensus       177 ~~g~~iv~~-~~~~~~~-~d--------~~~--~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL  238 (429)
T PF02347_consen  177 PLGIEIVEV-PLDEDGT-TD--------DDD--TAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NAL  238 (429)
T ss_dssp             HCCEEEEEE--BBTTCS-B---------STT--EEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGC
T ss_pred             hCCeEEEEe-cccccCC-cc--------ccC--eEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHH
Confidence             68899988 7776653 23        233  58999999975 788888   99999999999999987 3322 222


Q ss_pred             CCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHHHHHHHHH----------------------------
Q 015768          212 DGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLK----------------------------  259 (400)
Q Consensus       212 ~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~~~~~l~~----------------------------  259 (400)
                      +. ...+...+.||++++ +|.||.    +|...|++.++   +++...+..                            
T Consensus       239 ~~-l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~---~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrR  313 (429)
T PF02347_consen  239 GG-LKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVR---EDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRR  313 (429)
T ss_dssp             CT-C--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE----GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHG
T ss_pred             hC-cCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEh---hhhhhhCCCceecccccccccceeeeccccccccccc
Confidence            22 122234466787766 787753    45668999888   444444321                            


Q ss_pred             hhccCCcCcc-HHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768          260 VQDNIPICAS-IISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       260 ~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      .+...+.+.+ .+...++..++. .|.+.+++..++...++.++++.|++.....+..+.-..++....+.  ....++.
T Consensus       314 eKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~--~~~~~l~  391 (429)
T PF02347_consen  314 EKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD--KEVEELL  391 (429)
T ss_dssp             CCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS---HHHHHHH
T ss_pred             cchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc--HHHHHHH
Confidence            1111122222 232223333333 35677899999999999999999999743333333222334434332  1222344


Q ss_pred             HHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                      ++.. ..|+...    +...+.+-+|+.- .+.+|++.+++.|
T Consensus       392 ~~~~-~~gl~~~----~~~~~~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  392 KRGI-EGGLNLR----YPDDGALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             HTT-----EEEG----GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred             HHHH-hcCCCcc----ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence            3333 4453332    2234588888887 7889988888754

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=99.32  E-value=6.9e-10  Score=95.17  Aligned_cols=265  Identities=14%  Similarity=0.107  Sum_probs=160.5

Q ss_pred             HHHHHHHHHhhcC----CCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768           46 KMAMEKVKELVWD----PSISKYG-ADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (400)
Q Consensus        46 ~~v~~a~~~~~~~----~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~~~gd~vlv  118 (400)
                      ..|+++.++.--.    ....+|+ +..|.+.+.+..|+-+    |.+..  +..+.+ +|+|+..++..+++|||+.+.
T Consensus        38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~LRpgDell~  112 (416)
T COG4100          38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGILRPGDELLY  112 (416)
T ss_pred             HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhccCCCCeEEE
Confidence            4566665443221    1134455 3466666666666665    54322  234445 559999999999999999875


Q ss_pred             eCC-CccchhHH----------HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC-CCCCCccCCCHHHH
Q 015768          119 FAP-YYFNSYMS----------FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLL  186 (400)
Q Consensus       119 ~~p-~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~-p~nptG~~~~~~~l  186 (400)
                      ... -|....++          ++..|+...-+ |+..+| .+|.+.++..+++++  |+|.|.. .....--.++..++
T Consensus       113 i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v-~Lt~~g-kiD~~~v~~~i~~~t--kli~IQRS~GY~~RpS~~I~eI  188 (416)
T COG4100         113 ITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAV-PLTADG-KIDIQAVKTAISDRT--KLIGIQRSKGYAWRPSLSIAEI  188 (416)
T ss_pred             ecCCcchhHHHHhccCCCCcccHHHhCcceeec-ccccCC-cccHHHHHHhcCccc--eEEEEEeccCcCCCCcccHHHH
Confidence            533 35444443          35567777888 888777 789999999999887  9998873 22222224788889


Q ss_pred             HHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc--eeEEEEccCCcHHHHHHHHHhhc
Q 015768          187 KRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQLLKVQD  262 (400)
Q Consensus       187 ~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--~~G~i~~~~~~~~~~~~l~~~~~  262 (400)
                      +++.++.++  .|+++++|.+|++|.-...+.   .-+.++..+|+-|.-| +|+  -.||+.++   +++++...-...
T Consensus       189 ~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt---~vGaDliAGSLIKNpG-GgiaktGGYiaGk---~~~ve~~~yRlT  261 (416)
T COG4100         189 EEMITFVKEINPNVIVFVDNCYGEFVEEKEPT---HVGADLIAGSLIKNPG-GGIAKTGGYIAGK---AELVEAAAYRLT  261 (416)
T ss_pred             HHHHHHHHhcCCCEEEEEeccchhhhhccCcc---ccchhhhccceeeCCC-Cceeeccceeech---HHHHHhhceeee
Confidence            999998886  489999999999987654433   3356788999999886 443  35899999   677765432111


Q ss_pred             c-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCC
Q 015768          263 N-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLP  327 (400)
Q Consensus       263 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~  327 (400)
                      . .-..-............+- .=..+++..+..+-+-.....|++++.   .++..+.......+++.
T Consensus       262 aPGIG~e~Gat~~~l~~myqG-lFlAPhvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf~  329 (416)
T COG4100         262 APGIGREGGATLYSLREMYQG-LFLAPHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKFG  329 (416)
T ss_pred             cCCccccccccHHHHHHHHhh-hccchHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheecC
Confidence            0 0001111222222223221 111245555555444444555555554   23333443455556665

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=99.24  E-value=2.2e-09  Score=96.44  Aligned_cols=310  Identities=15%  Similarity=0.159  Sum_probs=192.2

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhc--------CCC-----C-EEEEeCCCccc
Q 015768           61 ISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLC--------DAG-----D-SVVMFAPYYFN  125 (400)
Q Consensus        61 ~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~--------~~g-----d-~vlv~~p~~~~  125 (400)
                      ...|...+..--+.+.+-..+.+..|.+.. +=++++|++-++..++.+..        ..|     + .+..++-+|++
T Consensus       130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS  209 (510)
T KOG0629|consen  130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS  209 (510)
T ss_pred             CceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh
Confidence            444544555555566666666666687764 77889998888887777653        111     2 34566788999


Q ss_pred             hhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768          126 SYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS  198 (400)
Q Consensus       126 ~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~  198 (400)
                      +..++..+|+   +++.| +.++.| .+.+++||+.|...    ..|-.|-.+..+...|..-|   |..|+++|++|++
T Consensus       210 i~kaAa~lg~gtd~c~~v-~t~e~G-km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~l  284 (510)
T KOG0629|consen  210 IKKAAAFLGLGTDHCIKV-KTDERG-KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKL  284 (510)
T ss_pred             HHHHHHHhccCCceeEEe-cccccC-ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCE
Confidence            9999999884   78888 888887 78999999988622    11344444445667788888   9999999999999


Q ss_pred             EEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc----------cC
Q 015768          199 WLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD----------NI  264 (400)
Q Consensus       199 ~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~----------~~  264 (400)
                      |+++|.+.++...-...+    .... ...-+.-+.+|.+| .++.++.++.+.  +.+.++-.....          -.
T Consensus       285 WmHvDAAwGGglLmS~k~R~kl~Gie-ra~SvtwnpHK~~g-aplqCsa~l~r~--~gll~~Cn~~~A~YLFq~dK~Ydv  360 (510)
T KOG0629|consen  285 WMHVDAAWGGGLLMSRKHRHKLTGIE-RANSVTWNPHKLMG-APLQCSAFLTRE--EGLLQRCNQMSAIYLFQQDKFYDV  360 (510)
T ss_pred             EEEeecccccccccChhhHhhccCcc-ccCceeecHHHhhc-CcchhhHHHHHH--HHHHHhhcccchhhhhccCceeec
Confidence            999999998643221111    1111 12233447899998 778888887774  333333322110          00


Q ss_pred             -----------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccC--CCCceEEEeeCCCCC
Q 015768          265 -----------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKG--GEGAIYLWARLPEKH  330 (400)
Q Consensus       265 -----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~--~~~~~~~~~~~~~~~  330 (400)
                                 .-....+-++..  +-..+...+++..++..++++++.+.|++.++.. +..  |+..++.+..+|+..
T Consensus       361 S~DTgdK~iQCGRh~D~FKlWlm--wkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~l  438 (510)
T KOG0629|consen  361 SYDTGDKAIQCGRHVDVFKLWLM--WKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSL  438 (510)
T ss_pred             ccccccchhhcCccccHHHHHHH--HHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHh
Confidence                       001233333332  2234556678999999999999999999977622 332  332333333333211


Q ss_pred             ---CC-----------HHHHHHHHHHhcCeEEeCCCccC-CCCeEEEEecc--CCHHHHHHHHHHHHHH
Q 015768          331 ---LD-----------DFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG--LVEDDCKAAADRLRRG  382 (400)
Q Consensus       331 ---~~-----------~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~--~~~~~~~~~~~~l~~~  382 (400)
                         .+           .-.+-.+++ +.|-.-..-.+.+ .++++|..++.  .+..|++.+++-|...
T Consensus       439 R~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl  506 (510)
T KOG0629|consen  439 RGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL  506 (510)
T ss_pred             ccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence               01           112344555 4554433222222 46789998776  5788888888777654

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=99.22  E-value=2.5e-11  Score=108.75  Aligned_cols=223  Identities=17%  Similarity=0.153  Sum_probs=58.7

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHH-HHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELR-DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~-~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      +.++++++++.+....+....|.-..|...-| ..+.+.+.+..|  .++.+++++...|+..++.++.. |.+|++...
T Consensus        17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltg--AeaA~VvNnnaAAv~L~l~~la~-~~EvIvsRG   93 (367)
T PF03841_consen   17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTG--AEAALVVNNNAAAVLLALNTLAK-GKEVIVSRG   93 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc-ccccccccc
Confidence            46788999988887765555554333332222 223333333334  46677888888999999988874 556665543


Q ss_pred             Cc------cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC--cc--CCCHHHHHHHHH
Q 015768          122 YY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--GT--YIPERLLKRISD  191 (400)
Q Consensus       122 ~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt--G~--~~~~~~l~~i~~  191 (400)
                      .-      +.+.++++..|++.++| -...   ...++++++++++++  .+++-.+++|-.  |.  -.+   ++++++
T Consensus        94 elVeiGgsFRip~vm~~sGa~lvEV-GttN---~t~~~Dye~AI~e~T--a~ll~Vh~Sn~~i~GFt~~~~---~~el~~  164 (367)
T PF03841_consen   94 ELVEIGGSFRIPDVMRQSGARLVEV-GTTN---RTHLSDYEKAITENT--AALLKVHTSNFRIQGFTGEVS---LEELAE  164 (367)
T ss_dssp             ----------------------------------------------------------------------------HHHH
T ss_pred             ccccccccccccccccccccccccc-cccc---ccccccccccccccc--ccccccccccccccccccccc---HHHHHH
Confidence            32      23557888899999888 3321   236788999999888  888777877753  32  235   899999


Q ss_pred             HHHHcCCEEEEccccccccc----C----CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          192 LCKAAGSWLVVDNTYEYFMY----D----GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~~----~----~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      ++++||+++|+|-..+.+..    +    ..-......+.+++++|-.|.+|  |...|.++++   +++++++++-.-.
T Consensus       165 la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gk---k~lI~~lk~~pl~  239 (367)
T PF03841_consen  165 LAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGK---KELIEKLKKHPLG  239 (367)
T ss_dssp             HHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEE---HHHHHHHHHHHHT
T ss_pred             HHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeC---HHHHHHHhhCCCc
Confidence            99999999999998754431    1    11122344678899999999996  6678999999   8999999875555


Q ss_pred             CCcCccHHHHHHHHHHhcC
Q 015768          264 IPICASIISQHLALYSLQT  282 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~  282 (400)
                      ..+.+......++.+.|+.
T Consensus       240 RalrvdK~tla~L~atL~~  258 (367)
T PF03841_consen  240 RALRVDKLTLAALEATLRL  258 (367)
T ss_dssp             TT-B--HHHHHHHHHHHHH
T ss_pred             ceEeeCHHHHHHHHHHHHH
Confidence            5666777777766666653

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.21  E-value=2.3e-10  Score=91.93  Aligned_cols=90  Identities=18%  Similarity=0.357  Sum_probs=72.1

Q ss_pred             CCeEEcCCCCCC-----------------CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC----CC
Q 015768           30 KNAVSLAQGVVY-----------------WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK----LY   88 (400)
Q Consensus        30 ~~~i~~~~~~~~-----------------~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~----~~   88 (400)
                      .++|+|+.+++-                 +..|+.+++++.+.      ..|++..|..++|+++++|+.+.+|    ++
T Consensus        43 ~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~  116 (153)
T PLN02994         43 QGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRVKFD  116 (153)
T ss_pred             CceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCCccc
Confidence            558888887652                 22233334444442      2377888999999999999999876    45


Q ss_pred             CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccc
Q 015768           89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN  125 (400)
Q Consensus        89 ~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~  125 (400)
                      +++|++|+|+++++..++.++++|||.|+++.|+|++
T Consensus       117 pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994        117 ADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             hhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence            8999999999999999999999999999999999974

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=99.19  E-value=6.9e-08  Score=87.41  Aligned_cols=337  Identities=15%  Similarity=0.119  Sum_probs=194.4

Q ss_pred             HHHHHHHHhcCCCeEEcC-CCCCCCCCcHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHH---HHhhcCCCCCcEE
Q 015768           19 MVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVKELVW-DPSISKYGADEGLPELRDALVKK---LNQENKLYKSSVM   93 (400)
Q Consensus        19 ~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~~~g~~~~~~~~a~~---l~~~~~~~~~~i~   93 (400)
                      ..++.......+.+..|- .|.-+.-.|+-+.+.+.+.-. -....+|.+.. ..-.-+++-+|   +.++.|++--+--
T Consensus        63 l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEI-SQGrLqaLfefQtlv~dLTGm~VANAS  141 (450)
T COG0403          63 LAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEI-SQGRLEALFEFQTLVADLTGLDVANAS  141 (450)
T ss_pred             HHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhh-hhHHHHHHHHHHHHHHHHhCCCcccch
Confidence            334444444455554442 333333345555545544321 11133443321 11222333333   4444588877777


Q ss_pred             EeCChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCe
Q 015768           94 VTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK  166 (400)
Q Consensus        94 ~~~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~  166 (400)
                      +.-++|.+=+.++.+..   ++..+++|+..+|+.+.+.++.    .|++++.+ +.+      |+++++.. .. ....
T Consensus       142 m~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~-~~~------d~~~l~~~-~~-~~~~  212 (450)
T COG0403         142 MLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV-DAD------DLDDLESA-DD-GDVF  212 (450)
T ss_pred             hhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEe-ccc------hhhhhhhc-cc-cCeE
Confidence            77888888888888774   2358999999999999988864    45676666 443      66777777 43 2248


Q ss_pred             EEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc---cCCCcceeE
Q 015768          167 LVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA---YGMMGWRVG  242 (400)
Q Consensus       167 ~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~---~g~~g~~~G  242 (400)
                      ++++.+|+. .| ...+   +.++.+.+++++.++++=.---.+..   -..+...+.+|++++....   +|.+|..+|
T Consensus       213 gv~vQyP~~-~G~~~~d---~~~l~~~~h~~~al~~v~aDplaL~L---L~pPGe~GADIvvG~~QrfGvPmgfGGPhag  285 (450)
T COG0403         213 GVLVQYPNT-FGIVEED---LRALIEAAHSAGALVIVAADPLALGL---LKPPGEFGADIVVGSAQRFGVPMGFGGPHAG  285 (450)
T ss_pred             EEEEecCCC-CCccchh---HHHHHHHHhhcCCEEEEEechhHhhc---cCCccccCCceEEecCcccCCCcCCCCccee
Confidence            888888874 55 5555   99999999999998876321111111   1112345678888886542   234577789


Q ss_pred             EEEccCCcHHHHHHH----------------------------HHhhccCCcCccHHHH-HHH-HHHhcCCcHHHHHHHH
Q 015768          243 YIAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQ-HLA-LYSLQTGPEWVTERVK  292 (400)
Q Consensus       243 ~i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~-~~~-~~~l~~~~~~~~~~~~  292 (400)
                      |+.++   +++..++                            ++.+...+.+.+.... .++ ..+.-.+.+.+++...
T Consensus       286 ~fA~~---~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~  362 (450)
T COG0403         286 YFAVK---DEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAE  362 (450)
T ss_pred             eeeEh---HhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            99888   4443332                            1111112222222111 111 1122235677899999


Q ss_pred             HHHHHHHHHHHHhccCCC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768          293 DLVRNREIIREALSPLGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED  370 (400)
Q Consensus       293 ~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~  370 (400)
                      +..+...++.+.|++.+. ..+....--.-+.++++.  .....+..+.. ..|+.+..-    .++.+-+++.- .+.+
T Consensus       363 r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~--~~~~~l~~~~~-~~G~~L~~~----~~~~~~ia~tEt~t~~  435 (450)
T COG0403         363 RIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE--EVAEALLAAAI-AGGINLRRV----DADTVLIALTETTTKE  435 (450)
T ss_pred             HHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch--hHHHHHHHHHH-hcCCceeee----cCCceEEEeecccCHH
Confidence            999999999999997653 244333222334556653  12444555443 577777542    24477777776 6788


Q ss_pred             HHHHHHHHHHHH
Q 015768          371 DCKAAADRLRRG  382 (400)
Q Consensus       371 ~~~~~~~~l~~~  382 (400)
                      +++.+++.+...
T Consensus       436 ~i~~l~~~~~~~  447 (450)
T COG0403         436 DIDALVAAFGGV  447 (450)
T ss_pred             HHHHHHHHHhhh
Confidence            888888777654

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=99.11  E-value=5e-08  Score=86.83  Aligned_cols=328  Identities=13%  Similarity=0.073  Sum_probs=192.6

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHhhcCCCCC-cEEEe-CChHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYKS-SVMVT-AGANQAF  102 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~-~g~t~a~  102 (400)
                      ...+|+.|  +...|++|++...+.+.+-...+++      .......+.+...+.+++++++|.+ +|+|+ .|+|...
T Consensus         5 ~~~nFsaG--Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf   82 (365)
T COG1932           5 RVYNFSAG--PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQF   82 (365)
T ss_pred             CCCCCCCC--cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHH
Confidence            35667776  2335788888887777653221111      2333456667777778888899753 56665 6688888


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchh-HHHHhcCcEEEEeccC---CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPC---SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~---~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG  178 (400)
                      ..+...|+.++..-.+....|..+. .-++..+..+....+.   .+-+..++++.+.  +..+.  .-|++|+-...+|
T Consensus        83 ~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~--ayv~~~~NeTi~G  158 (365)
T COG1932          83 AMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDND--AYVHFCWNETISG  158 (365)
T ss_pred             HHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCc--cEEEEecCCcccc
Confidence            8998888865433133334443222 2234444322111011   1123333443332  22212  3466664445668


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768          179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  258 (400)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~  258 (400)
                      +-++.  ...+.     .+.+++.|.+...+..   +.  +....+++..|..|.+|..|  ++.++.+   +++.++++
T Consensus       159 v~v~~--~p~~~-----~~~~~v~D~SS~ilsr---~i--Dvsk~dviyagaQKnlGpaG--ltvvIvr---~~~l~r~~  221 (365)
T COG1932         159 VEVPE--LPDIG-----SDGLLVADASSAILSR---PI--DVSKYDVIYAGAQKNLGPAG--LTVVIVR---PDLLERAE  221 (365)
T ss_pred             eEccC--CCCCC-----CCceEEEecccHHhcC---CC--ChhHcceEEEehhhccCccc--eEEEEEc---HHHHhccc
Confidence            76651  22211     1278999988764432   22  22345588899999998666  7888888   78888876


Q ss_pred             Hhh-------------ccCCcCccHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhccCCCCc---ccCCCCce
Q 015768          259 KVQ-------------DNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGA---VKGGEGAI  320 (400)
Q Consensus       259 ~~~-------------~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~  320 (400)
                      ...             .....+++.+..+.+...++-  ....++.+.++-..+.+.|.+.+.+-++..   .....+.+
T Consensus       222 ~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~m  301 (365)
T COG1932         222 SYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRM  301 (365)
T ss_pred             ccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccce
Confidence            541             122234566666655554441  123467777888888999999998876521   11344567


Q ss_pred             EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+++++.... -...+...+ +++|+..--|  ....+.+|+++.. ++.++++.+++-++.+.+.
T Consensus       302 nV~f~~~~~~-ld~~fv~ea-e~~gl~~lkG--hr~vgGmRasiynA~~~e~veaL~~fm~~f~~~  363 (365)
T COG1932         302 NVTFTLVDAE-LDKGFVAEA-EAAGLIYLKG--HRSVGGLRASIYNAVPLEDVEALTDFMDWFEET  363 (365)
T ss_pred             eEEEEcCcHH-HHHHHHHHH-HHcCCceecc--ccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence            7778876432 134455544 4677777666  2356779999887 8888877777777666554

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=99.10  E-value=1.5e-08  Score=91.86  Aligned_cols=301  Identities=17%  Similarity=0.109  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHhhcCCC-CCcEEEeCChH-HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--C
Q 015768           72 ELRDALVKKLNQENKLY-KSSVMVTAGAN-QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--S  145 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~-~~~i~~~~g~t-~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~  145 (400)
                      .+...++..+-+..|++ ....+++|-+| .++...+.++.  ..++.|+.+.-.+.+...++...|.+++.+ |..  +
T Consensus        56 ~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV-~~~~~~  134 (389)
T PF05889_consen   56 KLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVV-ENVLEG  134 (389)
T ss_dssp             HHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE--EEEET
T ss_pred             HHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEe-eccCCC
Confidence            34555555555566776 35556665543 44555555664  456899999999989999999999999988 532  2


Q ss_pred             CCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc------c
Q 015768          146 KTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC------C  218 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~------~  218 (400)
                      +....|++.+++.+++ +..+.+.++++++--.|+..|  ++.+|+++|+++|++.++-.||+--.   ....      .
T Consensus       135 d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~i~~IakiC~~~~IPhlvNnAYgvQ~---~~~~~~i~~a~  209 (389)
T PF05889_consen  135 DELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--DIEEIAKICKEYDIPHLVNNAYGVQS---SKCMHLIQQAW  209 (389)
T ss_dssp             TEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT----HHHHHHHHHHH
T ss_pred             CeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--cHHHHHHHHHHcCCceEEccchhhhH---HHHHHHHHHHH
Confidence            3345578888888863 233467777776655566655  59999999999999999999998311   1000      0


Q ss_pred             cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          219 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       219 ~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      -.+..++++.|+-|.| +-|...+.+.+++  +..+..+...........+..  ......+.-|...............
T Consensus       210 ~~GRvda~vqS~dkNF-~VPvGgai~As~~--~~~i~~vs~~YpGRas~sp~l--d~~itLl~LG~~g~~~ll~~r~~~f  284 (389)
T PF05889_consen  210 RVGRVDAFVQSTDKNF-MVPVGGAIMASFD--PSGILAVSKEYPGRASASPSL--DLFITLLSLGCTGYGALLKERKASF  284 (389)
T ss_dssp             HHSTCSEEEEEHHHHH-CEESSHEEEEESS--HHHHHHHHHTSHSHBTSHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCcceeeeecCCCE-EecCCCcEEEecC--HHHHHHHHHHhhhhhhcccch--HHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            0134457888999999 4444457777776  788888876544333333333  2333333323322333333333333


Q ss_pred             HHHHHHhc----cCCC--CcccCCCCceEEEee-CCCCC-CCHHHHHHHHHHhcCeE----EeCCCcc-------CCCCe
Q 015768          299 EIIREALS----PLGE--GAVKGGEGAIYLWAR-LPEKH-LDDFEVVRWLAHRHGVV----VIPGGAC-------GCRGH  359 (400)
Q Consensus       299 ~~l~~~L~----~~~~--~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~l~~~~gi~----v~~g~~~-------~~~~~  359 (400)
                      .++.+.|+    +.+.  .........+.+.+. +.... .+...+...|. .+||.    +.++...       +...+
T Consensus       285 ~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf-~R~VsG~RvV~~~~~~~tsh~~~yp~~Y  363 (389)
T PF05889_consen  285 PYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLF-KRGVSGIRVVTPGGKKQTSHSSNYPCPY  363 (389)
T ss_dssp             HHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHH-HTTEESSEEEETSSCEEETTSS--SSSE
T ss_pred             HHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHH-hCCcccceeeccCCCcccccCCCCchHH
Confidence            44444333    3333  111122223333332 11111 12345666554 77765    2333222       12367


Q ss_pred             EEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          360 LRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       360 iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      +-++-+. +++||++..+++|++.++
T Consensus       364 lt~AsaiG~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  364 LTAASAIGMTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             EEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence            8885444 799999999999999874

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.02  E-value=1.2e-06  Score=77.47  Aligned_cols=323  Identities=13%  Similarity=0.129  Sum_probs=196.7

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC-----CCCEEEE
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD-----AGDSVVM  118 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~-----~gd~vlv  118 (400)
                      ++...+.+|..-     --.|+.+.+.-.+++++.+.+    |  -+.++-|.-+-.|=++++..+++     ||.+.++
T Consensus        60 ms~~qwaamm~G-----DEAYagsrs~~~L~~avkdif----G--fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~  128 (471)
T COG3033          60 MTDKQWAAMMRG-----DEAYAGSRSYYALADAVKDIF----G--FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVA  128 (471)
T ss_pred             ccHHHHHHHhcc-----chhhcccccHHHHHHHHHHhc----C--ceeeeeccCCccHHHHHHHHHhhhccccCCccccc
Confidence            455555555442     234767777888888888877    5  35566777777777777777665     4555666


Q ss_pred             eCCCccchh-HHHHhcCcEEEEeccCCCC---------CCCCCHHHHHHhhccC--CCCeEEEEe-CCCCCCccCCCHHH
Q 015768          119 FAPYYFNSY-MSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETK--PTPKLVSVV-NPGNPSGTYIPERL  185 (400)
Q Consensus       119 ~~p~~~~~~-~~~~~~g~~~~~~~~~~~~---------~~~~~~e~l~~~l~~~--~~~~~v~l~-~p~nptG~~~~~~~  185 (400)
                      ++..|+... ...+..|+.++-+ +.++.         ..++|++.|++++.+.  ..+-.|+++ ..|...|+..|.+.
T Consensus       129 ~sN~~FdTTr~h~~~ng~~~~n~-~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n  207 (471)
T COG3033         129 FSNYHFDTTRGHIQINGATPRNV-YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMAN  207 (471)
T ss_pred             cccceecchhHHHHhcCCccccc-cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHh
Confidence            777775544 5567778766555 44321         2477999999999832  113444444 34567899999999


Q ss_pred             HHHHHHHHHHcCCEEEEccccc----ccccCCCCc---cccC-------CCcEEEEeccccccCCCcceeEEEEccCCc-
Q 015768          186 LKRISDLCKAAGSWLVVDNTYE----YFMYDGRKH---CCVE-------GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV-  250 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~----~~~~~~~~~---~~~~-------~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~-  250 (400)
                      +++..++|++|++.++.|.+..    .|.....+-   +...       .-.+-++-|.-|-- +..+ .|+++.+++. 
T Consensus       208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~-lvnm-GGfl~~~D~~~  285 (471)
T COG3033         208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG-LVNM-GGFLCFKDDSF  285 (471)
T ss_pred             HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc-eecc-ccEEEecCccH
Confidence            9999999999999999998753    222221111   1100       01122233444432 2111 2788888731 


Q ss_pred             HHHHHHHHHhhc-----cCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768          251 EGFATQLLKVQD-----NIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  323 (400)
Q Consensus       251 ~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  323 (400)
                      -++.+.++...-     .+..+.+.-...+++..|.++  .+|+.++.++    .++|.++|++.+. .+..|.+|.-++
T Consensus       286 fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Q----v~YL~~~l~~~GV-pi~~paGGHavf  360 (471)
T COG3033         286 FDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQ----VQYLADGLEEAGV-PIVQPAGGHAVF  360 (471)
T ss_pred             HHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHH----HHHHHHHHHhcCC-eeEecCCCceEE
Confidence            135555543221     122234445555666666653  2555555544    4677788888775 566677777777


Q ss_pred             eeCC-------CCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------CCeEEEEecc--CCHHHHHHHHHHHHH
Q 015768          324 ARLP-------EKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------RGHLRISFGG--LVEDDCKAAADRLRR  381 (400)
Q Consensus       324 ~~~~-------~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------~~~iRi~~~~--~~~~~~~~~~~~l~~  381 (400)
                      ++..       .....++.++.+|.++.||....-..+..             -.-+|+++.+  -|.+-++-.++.+++
T Consensus       361 vda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~  440 (471)
T COG3033         361 VDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKA  440 (471)
T ss_pred             eehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHH
Confidence            6632       22235778888898899998765444421             1469999876  466777777777766


Q ss_pred             HHHH
Q 015768          382 GLEE  385 (400)
Q Consensus       382 ~l~~  385 (400)
                      ..++
T Consensus       441 l~e~  444 (471)
T COG3033         441 LKEN  444 (471)
T ss_pred             HHhc
Confidence            6654

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.94  E-value=1.1e-06  Score=76.19  Aligned_cols=340  Identities=11%  Similarity=0.003  Sum_probs=195.6

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC-------CC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD-------PS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGA   98 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~-------~~-~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~   98 (400)
                      .++++.|.|+.++..+ +|..+...+.+.+++       +. .+--+.....+.+...++..+    |.+.++|.++++-
T Consensus        63 ~~d~~~iYlcGNSLGL-mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV----GA~e~EvavmNsL  137 (465)
T KOG3846|consen   63 SDDKPVIYLCGNSLGL-MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV----GAQENEVAVMNSL  137 (465)
T ss_pred             CCCCCeEEEecccccc-CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc----cCCchhhhhHhhh
Confidence            4457788888876554 344444445444432       10 111111233444555555544    8888999999999


Q ss_pred             HHHHHHHHHHhcCCC---CEEEEeCCCccchh----HHHHhcCcE----EEEeccCCCCCCCCCHHHHHHhhc-cCCCCe
Q 015768           99 NQAFVNIVLTLCDAG---DSVVMFAPYYFNSY----MSFQMTGVT----HILVGPCSSKTLHPDADWLEKTLE-TKPTPK  166 (400)
Q Consensus        99 t~a~~~~~~~l~~~g---d~vlv~~p~~~~~~----~~~~~~g~~----~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~  166 (400)
                      |.-++.++.++-+|-   -+|+...-.|++-+    ..++..|..    .+.+.|-..+ -.+..|++.+.+. .+..+.
T Consensus       138 TvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGE-etlRteDILd~IEkngDeiA  216 (465)
T KOG3846|consen  138 TVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGE-ETLRTEDILDTIEKNGDEIA  216 (465)
T ss_pred             hhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccc-cchhHHHHHHHHHhcCCeEE
Confidence            999999999998765   36888887776643    445556653    3444232222 2456788888776 444467


Q ss_pred             EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC--CCcceeEEE
Q 015768          167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG--MMGWRVGYI  244 (400)
Q Consensus       167 ~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g--~~g~~~G~i  244 (400)
                      +|+++..+.-||+.++   +.+|...-+..|.++=.|-+|.   .+..+....+++.++.+-...|.+.  .+|+...++
T Consensus       217 ~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA---vgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFv  290 (465)
T KOG3846|consen  217 LVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA---VGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFV  290 (465)
T ss_pred             EEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh---hcCCceEEeecCCceEEEeeecccccCCCccceeee
Confidence            7778888999999999   7777755556799999999888   4455555556676666655678773  233322233


Q ss_pred             EccCCcHHHHHHHHHhh------------------cc---CCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHH
Q 015768          245 AYPSEVEGFATQLLKVQ------------------DN---IPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIR  302 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~~------------------~~---~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~  302 (400)
                      ..+. ..+...++-.+-                  ..   ...+++.....++...|+... -.+.+.+++..-+..++.
T Consensus       291 Hekh-~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYle  369 (465)
T KOG3846|consen  291 HEKH-TKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLE  369 (465)
T ss_pred             ehhh-hcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHH
Confidence            3222 122222322110                  11   112344444444444554311 112333333333333333


Q ss_pred             HHhccCCC-----------CcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768          303 EALSPLGE-----------GAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  366 (400)
Q Consensus       303 ~~L~~~~~-----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-  366 (400)
                      ..++...+           +.+..|.    -|-.+.+.+..   +...++.+|- ++|+..-.    ..|+.||+.+.. 
T Consensus       370 yL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL~-krGv~~Dk----R~PNvIRvAPvpL  441 (465)
T KOG3846|consen  370 YLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQELH-KRGVIGDK----RRPNVIRVAPVPL  441 (465)
T ss_pred             HHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC---CchHHHHHHH-HcCeeccc----cCCCceEeecchh
Confidence            33332111           1122221    13344444443   2356777774 88988743    247899999665 


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHh
Q 015768          367 -LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       367 -~~~~~~~~~~~~l~~~l~~~~  387 (400)
                       ++..|+...+..|.+++..+.
T Consensus       442 YN~f~Dvy~f~n~L~e~~d~~e  463 (465)
T KOG3846|consen  442 YNTFSDVYIFVNALNEAMDKLE  463 (465)
T ss_pred             hccHHHHHHHHHHHHHHHHHhh
Confidence             889999999999999987754

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.91  E-value=1.2e-06  Score=88.81  Aligned_cols=324  Identities=14%  Similarity=0.088  Sum_probs=182.9

Q ss_pred             HHHHHHHhcCCCeEEc-CCCCCCCCCcHHHHHHHHHhhc-CCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768           20 VQIQELVRGAKNAVSL-AQGVVYWQPPKMAMEKVKELVW-DPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVT   95 (400)
Q Consensus        20 ~~~~~~~~~~~~~i~~-~~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~   95 (400)
                      ..+++.-+..+.+..| +.|.-+.-.|+.+++.+.+.-. -....+|.+.  +|.-+..=+.-..+.++.|++.-+--+.
T Consensus        68 ~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~  147 (954)
T PRK12566         68 ARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLL  147 (954)
T ss_pred             HHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhc
Confidence            3444444444444444 2333222344444455544321 1113445432  3333322233333555558775555566


Q ss_pred             CChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768           96 AGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV  168 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v  168 (400)
                      .++|.+=+.++.+..   ++..+|+|+...|+.+...++.    .|++++.             +++++.+..+  ..+|
T Consensus       148 D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~--~~~v  212 (954)
T PRK12566        148 DEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA--VFGA  212 (954)
T ss_pred             cchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC--EEEE
Confidence            677776665555543   2246899999999888877654    4555442             2233334333  4788


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc----CCCcceeEEE
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY----GMMGWRVGYI  244 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~----g~~g~~~G~i  244 (400)
                      ++.+|+. .|.+-+   +++|.++++++|.++++ .+.- +..+. -..+...+.||++++ ++.|    |.+|.-.|++
T Consensus       213 ~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~~-~~d~-laL~l-l~~Pge~GADI~vG~-~Q~fGvp~~~GGP~ag~~  284 (954)
T PRK12566        213 LLQYPDT-HGEIRD---LRPLIDQLHGQQALACV-AADL-LSLLV-LTPPGELGADVVLGS-TQRFGVPMGYGGPHAAYF  284 (954)
T ss_pred             EEECCCC-ceEEcc---HHHHHHHHHHcCCEEEE-EeCH-HHHhC-CCChhhcCCcEEeeC-CCcCCCCCCCCCCCeeee
Confidence            8888865 688866   89999999999998663 3321 11111 112234567788764 2333    3346668999


Q ss_pred             EccCCcHHHHHHHHH----------------------------hhccCCcCcc-HHHHHHHHHHhc-CCcHHHHHHHHHH
Q 015768          245 AYPSEVEGFATQLLK----------------------------VQDNIPICAS-IISQHLALYSLQ-TGPEWVTERVKDL  294 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~~~~~~~~  294 (400)
                      .++   +++..++..                            .+...+.+.+ .+...++..++. .|.+.+++..++.
T Consensus       285 a~~---~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~  361 (954)
T PRK12566        285 ACR---DDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRV  361 (954)
T ss_pred             eeh---HHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            888   455444321                            1111112222 222222222222 3556678888888


Q ss_pred             HHHHHHHHHHhccCCCCcccCCCCceEE--EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH
Q 015768          295 VRNREIIREALSPLGEGAVKGGEGAIYL--WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  371 (400)
Q Consensus       295 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  371 (400)
                      ..++.++.+.|++.+. ++...  .+|-  .+++..   +..++..... +.||.++.-    ..+.+.+|+.- .+.+|
T Consensus       362 ~~~a~~l~~~l~~~g~-~~~~~--~fF~~~~v~~~~---~~~~~~~~a~-~~~~n~r~~----~~~~~~~s~de~~~~~~  430 (954)
T PRK12566        362 HRLTAILAAGLEAKGI-KRLNR--HFFDTLTLEVGG---AQAAIIESAE-AARINLRIL----GRGRLGVSLDETCDEAT  430 (954)
T ss_pred             HHHHHHHHHHHHhcCC-ccccC--CccceEEEEccC---CHHHHHHHHH-HCCCeeEEe----CCCeEEEEeCCCCCHHH
Confidence            8899999999999654 44332  3343  334421   3556666554 789888753    25678899887 78899


Q ss_pred             HHHHHHHHH
Q 015768          372 CKAAADRLR  380 (400)
Q Consensus       372 ~~~~~~~l~  380 (400)
                      ++.++..+.
T Consensus       431 ~~~~~~~f~  439 (954)
T PRK12566        431 VARLFDIFL  439 (954)
T ss_pred             HHHHHHHhc
Confidence            988888884

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.79  E-value=3.6e-07  Score=80.52  Aligned_cols=215  Identities=14%  Similarity=0.097  Sum_probs=129.3

Q ss_pred             CHHHHHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC----CccccCC
Q 015768          151 DADWLEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR----KHCCVEG  221 (400)
Q Consensus       151 ~~e~l~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~~~  221 (400)
                      .+++++++|.    .+..+.+++++..+...|. -.+++.++.|.++|++|++.+|+||++.+....|.    .++.+..
T Consensus       254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~  333 (484)
T KOG1405|consen  254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS  333 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence            4677777776    2223566777766888886 57999999999999999999999999986655442    2333444


Q ss_pred             CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      +.+++  +|||-+- .|   ||....    +++-. +.++...++...+.-...+...++.-.  .+...+......+.|
T Consensus       334 PpD~v--TFSKK~q-~g---Gffh~~----~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~--~~~Ll~n~~~vG~~l  400 (484)
T KOG1405|consen  334 PPDVV--TFSKKFQ-TG---GFFHDE----EFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIK--REDLLNNVAHVGKAL  400 (484)
T ss_pred             Cccce--ehhhhhh-cC---ccccCc----ccCCC-chHHHhhhhcCChHHHHHHHHHHHHHh--HHHHHHHHHHHHHHH
Confidence            55555  7789883 55   655433    22110 112222355545544444445554311  245556666667777


Q ss_pred             HHHhccC----CC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHH
Q 015768          302 REALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAA  375 (400)
Q Consensus       302 ~~~L~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~  375 (400)
                      ..+|.++    |. +.-.+.. |-|+.+++|... -.+.+.. .++-.|+.+-.+    +...||+-++. .++.-.+-.
T Consensus       401 ~~gL~~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~-~Rdk~i~-~~~~nGv~~GGC----g~~siRfRPsLvf~~~Ha~i~  473 (484)
T KOG1405|consen  401 LKGLLELQAKYPGKINNLRGR-GTFIAWDCPSGS-IRDKLIL-IARLNGVNLGGC----GDKSIRFRPSLVFRKHHADIF  473 (484)
T ss_pred             HHHHHHHHHhCchhhhccccc-ceEEEEeCCChH-HHHHHHH-HHHHcCceeccc----ccceeeeccceeehhhhHHHH
Confidence            7776653    33 2233344 667777888653 2344555 345788887432    34567776654 345555566


Q ss_pred             HHHHHHHHHH
Q 015768          376 ADRLRRGLEE  385 (400)
Q Consensus       376 ~~~l~~~l~~  385 (400)
                      ++++.+.+..
T Consensus       474 l~~~~k~l~~  483 (484)
T KOG1405|consen  474 LDIFDKILAG  483 (484)
T ss_pred             HHHHHHHhcc
Confidence            6666666543

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=98.67  E-value=7.6e-06  Score=77.82  Aligned_cols=339  Identities=15%  Similarity=0.123  Sum_probs=199.7

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH-HH---H
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN-QA---F  102 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t-~a---~  102 (400)
                      +.+|++++..+-+....++..--...+.+  +.+|.|.   +|..++...+..+|.+..|  -|.+-+.+++- ++   =
T Consensus       539 hSMiPLGSCTMKLNsttEmmPiTwp~fan--IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG--~D~~s~QPNsGA~GEYaG  614 (1001)
T KOG2040|consen  539 HSMIPLGSCTMKLNSTTEMMPITWPEFAN--IHPFAPVEQAQGYQQLFTELEKDLCEITG--FDSFSLQPNSGAQGEYAG  614 (1001)
T ss_pred             hhcccccceeeeccccceeccccchhhcc--CCCCCchHHHhhHHHHHHHHHHHhheeec--ccceeecCCCCcccchhh
Confidence            45666666554443333333322233333  5666553   6677777788888765555  46666654322 22   2


Q ss_pred             HHHHHHh-cCCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCC
Q 015768          103 VNIVLTL-CDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNP  176 (400)
Q Consensus       103 ~~~~~~l-~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~np  176 (400)
                      ..++++. ...|+    .-+++...|..-...+..+|.+++.| ..+.+| ++|..+|++.... .....++.++.|+.-
T Consensus       615 L~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV-~~~~~G-~id~~dLk~kaekh~~~Laa~MvTYPST~  692 (1001)
T KOG2040|consen  615 LRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPV-GCDANG-NIDMVDLKAKAEKHKDNLAALMVTYPSTH  692 (1001)
T ss_pred             HHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEe-eccCCC-CccHHHHHHHHHHhhhhhheeEEeccccc
Confidence            2344444 23332    35777888877777788899999999 787777 6899999988763 333578888888753


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHH
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEG  252 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~  252 (400)
                       |+.  .+.+.+++++.++||--+..|.+--.--.+-  ....+.+.++.=..++|.|..    +|..+|=|..+   +-
T Consensus       693 -Gvf--E~~i~d~cd~iHehGGQVYlDGANMNAqVGl--c~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK---~H  764 (1001)
T KOG2040|consen  693 -GVF--EEGIDDICDIIHEHGGQVYLDGANMNAQVGL--CRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KH  764 (1001)
T ss_pred             -ccc--cccHHHHHHHHHhcCCEEEecCCCccceecc--cCCccccccceeecccceeeecCCCCCCCCCccchh---hh
Confidence             433  2239999999999999999999865221111  122334556766788998843    34455666655   22


Q ss_pred             HHHHHHHhh--------c--------cCCcCcc--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          253 FATQLLKVQ--------D--------NIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       253 ~~~~l~~~~--------~--------~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      ++..+..-.        .        ..+|+.+  .+.-++..+.+-.  ..++...+...-+++++.+.|+.+-.+-+.
T Consensus       765 LapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~--~GL~~as~~AiLNaNYMakRLe~hYkil~~  842 (1001)
T KOG2040|consen  765 LAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGS--GGLKDASKIAILNANYMAKRLESHYKILFR  842 (1001)
T ss_pred             ccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcc--cccchhhHHHhhhhHHHHHHHhhccceeEe
Confidence            322221100        0        0112211  1223444444432  234444555566789999999986543444


Q ss_pred             CCCCceE---EEeeCCC----CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIY---LWARLPE----KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       315 ~~~~~~~---~~~~~~~----~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ... +..   +.+++.+    ...+..+++.+|. ++|..-..-+ +--++.+-|-+.- .+.+++++.++++-..-+++
T Consensus       843 ~~~-~~vaHEFIlD~r~fK~~agieavDvAKRL~-DYgFHaPTms-wPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI  919 (1001)
T KOG2040|consen  843 GEN-GLVAHEFILDLRPFKKTAGIEAVDVAKRLM-DYGFHAPTMS-WPVAGTLMIEPTESEDKAELDRFCDALISIREEI  919 (1001)
T ss_pred             cCC-cceeeeeeeechhhccccCCcHHHHHHHHH-hccCCCCccc-cccCCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence            444 321   2233322    2357889999986 8998763333 3346777777665 67788888888776655554


Q ss_pred             h
Q 015768          387 V  387 (400)
Q Consensus       387 ~  387 (400)
                      .
T Consensus       920 ~  920 (1001)
T KOG2040|consen  920 A  920 (1001)
T ss_pred             H
Confidence            3

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=98.14  E-value=2.6e-05  Score=66.34  Aligned_cols=293  Identities=16%  Similarity=0.160  Sum_probs=144.4

Q ss_pred             CcEEEeCChHHHHHHHHHHhc--CCCCE-EEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCC
Q 015768           90 SSVMVTAGANQAFVNIVLTLC--DAGDS-VVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTP  165 (400)
Q Consensus        90 ~~i~~~~g~t~a~~~~~~~l~--~~gd~-vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~  165 (400)
                      ..+++.-.+...+...+.++.  +|..+ |+-..-.-.+....+-..|++++.+.++.+ +...-|++.+++.+.+.. +
T Consensus        77 nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g-~  155 (432)
T KOG3843|consen   77 NCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELG-E  155 (432)
T ss_pred             ceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhC-C
Confidence            333333333355666666664  34332 222222223344455678999888855543 334558899998887543 3


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcceeE
Q 015768          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVG  242 (400)
Q Consensus       166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G  242 (400)
                      ..|+..+.....=..-+++.+++|+.+|..|+++-|+..+|+.-.-.-....   ..-+..+.++.|+-|.|-+| .. |
T Consensus       156 dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vp-vg-g  233 (432)
T KOG3843|consen  156 DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVP-VG-G  233 (432)
T ss_pred             ceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceee-cc-h
Confidence            4444332222111223567899999999999999999999983211100000   00134456788999999533 22 3


Q ss_pred             EEE-ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHH----HHHHHHHHHHHHHHHHHHhccCCCC--cccC
Q 015768          243 YIA-YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW----VTERVKDLVRNREIIREALSPLGEG--AVKG  315 (400)
Q Consensus       243 ~i~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~  315 (400)
                      .++ .=+  ..+++.+.+.........+  +...+...|..+...    +.+..+-..++++.+...-+.++.-  ....
T Consensus       234 aiia~fk--~n~iq~iak~ypgrasa~p--s~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~  309 (432)
T KOG3843|consen  234 AIIAAFK--DNFIQEIAKMYPGRASASP--SLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPE  309 (432)
T ss_pred             hHhhHhH--HHHHHHHHHhCCCccccCc--cHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCC
Confidence            333 222  4677777665543333333  333333344333322    2222333333333333333333331  1111


Q ss_pred             CCCceEEEee-CCCCCCCHHHHHHHHHHhcCeE---EeCCCccC------------------CCCeEEEEecc-CCHHHH
Q 015768          316 GEGAIYLWAR-LPEKHLDDFEVVRWLAHRHGVV---VIPGGACG------------------CRGHLRISFGG-LVEDDC  372 (400)
Q Consensus       316 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~~------------------~~~~iRi~~~~-~~~~~~  372 (400)
                      .+.+.-+.++ +++.....-.++--++-..||.   +.|.+.+.                  ...++-+..+. ++..|+
T Consensus       310 n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdl  389 (432)
T KOG3843|consen  310 NEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDL  389 (432)
T ss_pred             chhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHH
Confidence            1212222222 2221100111222222244443   33333221                  01244444333 688899


Q ss_pred             HHHHHHHHHHHHHHhcc
Q 015768          373 KAAADRLRRGLEELVKD  389 (400)
Q Consensus       373 ~~~~~~l~~~l~~~~~~  389 (400)
                      ++...+|...+.++.++
T Consensus       390 d~~~~rl~~~~a~~~ke  406 (432)
T KOG3843|consen  390 DEFFNRLDRCLAAFRKE  406 (432)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999998888754

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=97.62  E-value=0.0088  Score=51.91  Aligned_cols=329  Identities=13%  Similarity=0.108  Sum_probs=177.9

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHhhcCCCC-CcE-EEeCChHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYK-SSV-MVTAGANQA  101 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~~~~~~~-~~i-~~~~g~t~a  101 (400)
                      ...++|..|  +..+|.+|+..+.+.+-+-...+-+      .+.....+.+.....+.++++++. -.| ++..|+|.-
T Consensus         6 ~~vvnFaaG--PAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~q   83 (370)
T KOG2790|consen    6 ERVVNFAAG--PAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQ   83 (370)
T ss_pred             cceeecCCC--cccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCccc
Confidence            356788776  3456788888888877652211111      223344566666666777778874 344 445777777


Q ss_pred             HHHHHHHhc--CCCCEE-EEeCCCccc-hhHHHHhcCcE-EEEeccCCCCC--CCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768          102 FVNIVLTLC--DAGDSV-VMFAPYYFN-SYMSFQMTGVT-HILVGPCSSKT--LHPDADWLEKTLETKPTPKLVSVVNPG  174 (400)
Q Consensus       102 ~~~~~~~l~--~~gd~v-lv~~p~~~~-~~~~~~~~g~~-~~~~~~~~~~~--~~~~~e~l~~~l~~~~~~~~v~l~~p~  174 (400)
                      +..+...|.  +.|+.. .+...+|.. ..+-++..|.. .+.. +..+..  -.+|.+.++.  +++.  +.|+.|.-.
T Consensus        84 FaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~-~~k~y~ygkvPd~~~w~~--~~da--~yvyyCaNE  158 (370)
T KOG2790|consen   84 FAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIP-KLKSYTYGKVPDPSTWEL--NPDA--SYVYYCANE  158 (370)
T ss_pred             ccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEec-cccccccCcCCChhhccc--CCCc--cEEEEecCc
Confidence            777776665  455322 222333322 11233455543 3333 333322  2344444432  2333  677776444


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      ...|+-++.  + -   +-..++..++.|-+.-.+.   .+...  ....+++.+..|.+|++|+  -.++.+   ++++
T Consensus       159 TVHGVEf~~--~-P---~~~~~~~vlVaDmSSnflS---rpvDv--sk~gvi~aGAQKN~G~aG~--Tvvivr---~dll  222 (370)
T KOG2790|consen  159 TVHGVEFDF--I-P---VNDPKGAVLVADMSSNFLS---RPVDV--SKFGVIFAGAQKNVGPAGV--TVVIVR---KDLL  222 (370)
T ss_pred             eeeceecCC--C-C---CCCCCCceEEEecccchhc---CCccc--hhcceEEeccccccCcccc--EEEEEe---hhhh
Confidence            455776541  1 1   1124688888887755332   12222  2344778889999987764  444555   4554


Q ss_pred             HHHHHhhc------------cCCcCccHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc--cCC--
Q 015768          255 TQLLKVQD------------NIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAV--KGG--  316 (400)
Q Consensus       255 ~~l~~~~~------------~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~--  316 (400)
                      .....+..            +...+++.+.++++...++.  ....+..+.+.-.+....+.+.+....++..  +.|  
T Consensus       223 g~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~  302 (370)
T KOG2790|consen  223 GNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSV  302 (370)
T ss_pred             cccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhh
Confidence            44332211            12234565666555554442  1123566666667778888999987644222  222  


Q ss_pred             CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+-+-+.+++..... .+++.....+++=+-+. |.  ..-+.+|-|+-. ++-++.+.+++-++++.+.
T Consensus       303 RS~MNV~Fri~~d~L-e~eFLkeA~~~~mv~LK-Gh--RSVGGiRASlYNAisv~~~q~L~~~m~~F~k~  368 (370)
T KOG2790|consen  303 RSRMNVPFRIEKDEL-EAEFLKEAAKEHMVQLK-GH--RSVGGIRASLYNAISVEEVQKLAAFMKEFQKK  368 (370)
T ss_pred             hhhcccceeecchHH-HHHHHHHHHHhhhhccc-cc--cccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence            334666777764332 33455444433333333 22  245789999877 8888888777777666543

>PLN02672 methionine S-methyltransferase

Probab=97.53  E-value=0.0033  Score=65.80  Aligned_cols=242  Identities=11%  Similarity=0.069  Sum_probs=146.9

Q ss_pred             HHHHHHHHHhcC----CCeEEcCCCCCCC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CC
Q 015768           18 IMVQIQELVRGA----KNAVSLAQGVVYW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS   90 (400)
Q Consensus        18 ~~~~~~~~~~~~----~~~i~~~~~~~~~-~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~   90 (400)
                      ....+.+++.+|    +..+|++-.+-.. .---+-+..+...+......+|.++.|...+|..++.++...++++  ++
T Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (1082)
T PLN02672        371 QVKTIFKFLKNGFHEVSGSLDLSFEDESVADEKIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPD  450 (1082)
T ss_pred             HHHHHHHHHHccchhhhhhccccccccccchhhccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCcc
Confidence            344444554443    4455555333221 1112345667788888778899999999999999999999999875  89


Q ss_pred             cEEEeCChHHHHHHHHHHhc------CCCCEEEEeCCCccchhHHHHhcC--------cEEEEeccCCCCCCCCCHHHHH
Q 015768           91 SVMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTG--------VTHILVGPCSSKTLHPDADWLE  156 (400)
Q Consensus        91 ~i~~~~g~t~a~~~~~~~l~------~~gd~vlv~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~e~l~  156 (400)
                      +|++.++-..|++.+++.+.      ..+.+-.++    .-|...+...|        ..+..+ ... .    ..+.+.
T Consensus       451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~----~~~~~~  520 (1082)
T PLN02672        451 NVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLAIENATSDSKSDDVITVI-EAP-R----QSDLVI  520 (1082)
T ss_pred             ceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhhhhcccccCccCCeEEEE-eCC-C----cchHHH
Confidence            99999999999999988764      222111111    12333333333        222222 111 1    123455


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc-ccccCCCCccc-------cCCCcEEEEe
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE-YFMYDGRKHCC-------VEGDHVVNLF  228 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~~~~~~~-------~~~~~~i~~~  228 (400)
                      ++++.-+ |++|+..-..   +-..+...++.|.+.+++.|.+++.|.+.. .+.........       .-+....++.
T Consensus       521 ~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  596 (1082)
T PLN02672        521 ELIKKLK-PQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIIC  596 (1082)
T ss_pred             HHHHhCC-CeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhh
Confidence            5665433 5777754332   223344558999999999999999998654 22221111100       1134556677


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHH
Q 015768          229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL  275 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (400)
                      ++-|.--.+.+.+.++++-+  +.+.+.+.+.........+.++|+.
T Consensus       597 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  641 (1082)
T PLN02672        597 GLVKNQVYSDLEVAFVISEN--EAVLKALSKTGEVLEGRTAIISQFY  641 (1082)
T ss_pred             hhhhccccccceEEEEecCc--HHHHHHHHHHHHhhccchHHHHHHH
Confidence            78776645899999999886  6677777765544444445555543

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.39  E-value=0.058  Score=52.38  Aligned_cols=268  Identities=15%  Similarity=0.145  Sum_probs=146.9

Q ss_pred             hhcCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchhHHHHhc----CcEEEEeccCCCCCCCCCHHHHHH
Q 015768           83 QENKLYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEK  157 (400)
Q Consensus        83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~e~l~~  157 (400)
                      ...|++-.+.-+..-+|.|-+....+.. .++.+.++...+|+.....++..    |+++...          +   +++
T Consensus       174 dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~---~~~  240 (1001)
T KOG2040|consen  174 DLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------D---IKE  240 (1001)
T ss_pred             hccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec----------C---HHH
Confidence            3346665555555555566666555543 44567999999999988877542    2332222          2   122


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  237 (400)
                      .-........+++..|.. .|.+.+   ..++++++++.+.+++.-.---.+..-.   .+...+.+|.++|... ||+|
T Consensus       241 ~~~s~~~v~gvlvQYP~t-~G~i~d---~~el~~~a~~~~s~vv~atDLLaLtiLr---pPgefGaDIavGSsQR-FGVP  312 (1001)
T KOG2040|consen  241 ADYSSKDVSGVLVQYPDT-EGSVLD---FDELVELAHANGSLVVMATDLLALTILR---PPGEFGADIAVGSSQR-FGVP  312 (1001)
T ss_pred             hhccccceeEEEEEcCCC-CCcccC---HHHHHHHhhccCceEEEeehhhHHHccC---ChhhcCceeeeccccc-cCcc
Confidence            111222257777777765 578888   7777778888887766532211111111   1223567788887544 3322


Q ss_pred             ----cceeEEEEcc------------------CCcHHHHHHHHHhhcc---CCcCccHHHHHHHH------HHhcCCcHH
Q 015768          238 ----GWRVGYIAYP------------------SEVEGFATQLLKVQDN---IPICASIISQHLAL------YSLQTGPEW  286 (400)
Q Consensus       238 ----g~~~G~i~~~------------------~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~------~~l~~~~~~  286 (400)
                          |.-.|++.+.                  ...+.+.-.++...+.   ---+.|.-...|+.      .++-.+.+.
T Consensus       313 lGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~g  392 (1001)
T KOG2040|consen  313 LGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHG  392 (1001)
T ss_pred             ccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHH
Confidence                2222222222                  0111222122211110   01122222222222      223335567


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768          287 VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  366 (400)
Q Consensus       287 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~  366 (400)
                      +++..+++......|..+|+..+. ++..-  .+|=.+++.-.. +.+++..+.+ +++|-++.-    ..+.+-+++.-
T Consensus       393 L~~IArrvh~~T~~l~~~l~~agh-el~~k--~fFDTLkI~~~~-s~~~~l~rA~-~~~iNlr~~----ed~tigvslDE  463 (1001)
T KOG2040|consen  393 LKEIARRVHNLTLILAEGLKNAGH-ELQHK--PFFDTLKIRCGC-SAEEVLDRAA-KRQINLRLV----EDGTIGVSLDE  463 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcch-hhccc--cccceEEEEecC-cHHHHHHHHH-hhcCceEEe----ecCceEEeecc
Confidence            888888899999999999998763 33322  344444443322 5777777665 667777642    46778888876


Q ss_pred             -CCHHHHHHHHHHHH
Q 015768          367 -LVEDDCKAAADRLR  380 (400)
Q Consensus       367 -~~~~~~~~~~~~l~  380 (400)
                       .+.+|++.++..+.
T Consensus       464 Tv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  464 TVTEKDVDDLLWVFN  478 (1001)
T ss_pred             cccHHHHHHHHHHHc
Confidence             67888888887775

>CHL00200 trpA tryptophan synthase alpha subunit; Provisional

Probab=90.65  E-value=12  Score=33.31  Aligned_cols=163  Identities=13%  Similarity=0.149  Sum_probs=90.9

Q ss_pred             HHHHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCC---
Q 015768           22 IQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG---   97 (400)
Q Consensus        22 ~~~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g---   97 (400)
                      +..+.+.|-|++.++..+++.- --|.++++..+++.++.        ....+-+.+.+ +++...++  =++++--   
T Consensus        35 ~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~--------~~~~~~~~~~~-~r~~~~~p--~vlm~Y~N~i  103 (263)
T CHL00200         35 LKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGI--------NLNKILSILSE-VNGEIKAP--IVIFTYYNPV  103 (263)
T ss_pred             HHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HhcCCCCC--EEEEecccHH
Confidence            4445677888888888776543 23566667777766531        12333333333 22222322  2333321   


Q ss_pred             hHHHHHHHHHHhcCCC-CEEEEeCCCccc---hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768           98 ANQAFVNIVLTLCDAG-DSVVMFAPYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus        98 ~t~a~~~~~~~l~~~g-d~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      -..+++..+.-+.+.| |.|++++-.+..   +...++..|...+.+  +.+.   -+.+.++...+...  .-|++...
T Consensus       104 ~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~l--v~Pt---T~~eri~~i~~~a~--gFIY~vS~  176 (263)
T CHL00200        104 LHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILL--IAPT---SSKSRIQKIARAAP--GCIYLVST  176 (263)
T ss_pred             HHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEE--ECCC---CCHHHHHHHHHhCC--CcEEEEcC
Confidence            1225566666666667 888888766533   445667788877665  2222   14556666555433  56776655


Q ss_pred             CCCCccCCC-HHHHHHHHHHHHHc-CCEEEE
Q 015768          174 GNPSGTYIP-ERLLKRISDLCKAA-GSWLVV  202 (400)
Q Consensus       174 ~nptG~~~~-~~~l~~i~~l~~~~-~~~li~  202 (400)
                      ...||.--. .+++.++.+.++++ +.++.+
T Consensus       177 ~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v  207 (263)
T CHL00200        177 TGVTGLKTELDKKLKKLIETIKKMTNKPIIL  207 (263)
T ss_pred             CCCCCCCccccHHHHHHHHHHHHhcCCCEEE
Confidence            567777422 24577777777655 555554

>TIGR00262 trpA tryptophan synthase, alpha subunit

Probab=90.44  E-value=12  Score=33.11  Aligned_cols=164  Identities=14%  Similarity=0.098  Sum_probs=86.3

Q ss_pred             HHHHHhcCCCeEEcCCCCCCCCC-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh-cCCCCCcEEEeCC-h
Q 015768           22 IQELVRGAKNAVSLAQGVVYWQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE-NKLYKSSVMVTAG-A   98 (400)
Q Consensus        22 ~~~~~~~~~~~i~~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~-~~~~~~~i~~~~g-~   98 (400)
                      +..+.++|-++|.++..+++.-. -|-++++..+++.++.        ....+.+.+.+ +++. .+++-......+- -
T Consensus        30 ~~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~G~--------~~~~~~~~v~~-ir~~~~~~plv~m~Y~Npi~  100 (256)
T TIGR00262        30 IKTLIEAGADALELGVPFSDPLADGPTIQAADLRALRAGM--------TPEKCFELLKK-VRQKHPNIPIGLLTYYNLIF  100 (256)
T ss_pred             HHHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HHhcCCCCCEEEEEeccHHh
Confidence            44456788999999998766533 3566667777776542        12233333333 2222 2444332222232 1


Q ss_pred             HHHHHHHHHHhcCCC-CEEEEeCCCcc---chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768           99 NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG  174 (400)
Q Consensus        99 t~a~~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~  174 (400)
                      ..++...+..+.+.| |.|++++-.+.   .+...++..|...+.+  +.+.   .+.+.++...+...  ..|++...+
T Consensus       101 ~~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~l--v~P~---T~~eri~~i~~~~~--gfiy~vs~~  173 (256)
T TIGR00262       101 RKGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFL--VAPN---ADDERLKQIAEKSQ--GFVYLVSRA  173 (256)
T ss_pred             hhhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEE--ECCC---CCHHHHHHHHHhCC--CCEEEEECC
Confidence            335566666676666 77777765542   2335557788876644  2222   14566666655432  455655445


Q ss_pred             CCCccC--CCHHHHHHHHHHHHHc-CCEEEE
Q 015768          175 NPSGTY--IPERLLKRISDLCKAA-GSWLVV  202 (400)
Q Consensus       175 nptG~~--~~~~~l~~i~~l~~~~-~~~li~  202 (400)
                      .-||..  ++.+ +.+..+.++++ +..+++
T Consensus       174 G~TG~~~~~~~~-~~~~i~~lr~~~~~pi~v  203 (256)
T TIGR00262       174 GVTGARNRAASA-LNELVKRLKAYSAKPVLV  203 (256)
T ss_pred             CCCCCcccCChh-HHHHHHHHHhhcCCCEEE
Confidence            667763  4433 44444444433 444444

Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.

>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]

Probab=88.69  E-value=16  Score=32.20  Aligned_cols=156  Identities=12%  Similarity=0.065  Sum_probs=84.7

Q ss_pred             HHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEe---CChH
Q 015768           24 ELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT---AGAN   99 (400)
Q Consensus        24 ~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~---~g~t   99 (400)
                      -+.+.|-|.+.++..+++.- --|.++++..+++.++.     .   .+..-+.+.+. .+. +.+..-++++   +--.
T Consensus        39 ~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g~-----t---~~~~lel~~~~-r~~-~~~~Pivlm~Y~Npi~~  108 (265)
T COG0159          39 TLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAGV-----T---LEDTLELVEEI-RAK-GVKVPIVLMTYYNPIFN  108 (265)
T ss_pred             HHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHCCC-----C---HHHHHHHHHHH-Hhc-CCCCCEEEEEeccHHHH
Confidence            34677888888888775542 23566666677766532     1   12222222222 111 2222234443   2234


Q ss_pred             HHHHHHHHHhcCCC-CEEEEeCCCc---cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768          100 QAFVNIVLTLCDAG-DSVVMFAPYY---FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus       100 ~a~~~~~~~l~~~g-d~vlv~~p~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                      .++...+..+.+.| |.+++++--.   ..+...++..|+..+++.+  +.   .+-+.+++..+...  .-++....+-
T Consensus       109 ~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lva--Pt---t~~~rl~~i~~~a~--GFiY~vs~~G  181 (265)
T COG0159         109 YGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVA--PT---TPDERLKKIAEAAS--GFIYYVSRMG  181 (265)
T ss_pred             hhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeC--CC---CCHHHHHHHHHhCC--CcEEEEeccc
Confidence            55666566666666 8888876554   2255666778888777611  11   13455555554333  5666666667


Q ss_pred             CCccCCC-HHHHHHHHHHHHHc
Q 015768          176 PSGTYIP-ERLLKRISDLCKAA  196 (400)
Q Consensus       176 ptG~~~~-~~~l~~i~~l~~~~  196 (400)
                      -||.-.+ ...+.++.+..+++
T Consensus       182 vTG~~~~~~~~~~~~v~~vr~~  203 (265)
T COG0159         182 VTGARNPVSADVKELVKRVRKY  203 (265)
T ss_pred             ccCCCcccchhHHHHHHHHHHh
Confidence            7887655 22356666666654

>PLN02591 tryptophan synthase

Probab=83.71  E-value=30  Score=30.46  Aligned_cols=163  Identities=11%  Similarity=0.076  Sum_probs=96.3

Q ss_pred             HHHHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC-C--
Q 015768           22 IQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA-G--   97 (400)
Q Consensus        22 ~~~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~-g--   97 (400)
                      +..+.++|-|++.++..+++.- --|-++++..+++.++.        ....+.+.+.+ +++...++  =++++- +  
T Consensus        22 ~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~--------~~~~~~~~~~~-~r~~~~~p--~ilm~Y~N~i   90 (250)
T PLN02591         22 LRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGT--------TLDSVISMLKE-VAPQLSCP--IVLFTYYNPI   90 (250)
T ss_pred             HHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HhcCCCCC--EEEEecccHH
Confidence            4445688899999999886653 33666667777776542        12334444433 22222222  234432 1  


Q ss_pred             hHHHHHHHHHHhcCCC-CEEEEeCCCcc---chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768           98 ANQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus        98 ~t~a~~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      -..+++..+..+.+.| |.+++++-.+.   .+...++..|+..+.+  +.+.   .+.+.++...+..+  ..|++..-
T Consensus        91 ~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~l--v~Pt---t~~~ri~~ia~~~~--gFIY~Vs~  163 (250)
T PLN02591         91 LKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLL--TTPT---TPTERMKAIAEASE--GFVYLVSS  163 (250)
T ss_pred             HHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEE--eCCC---CCHHHHHHHHHhCC--CcEEEeeC
Confidence            1236667777777777 89999987763   3445667889887776  2111   13445565554433  67777665


Q ss_pred             CCCCccCCC-HHHHHHHHHHHHHc-CCEEEE
Q 015768          174 GNPSGTYIP-ERLLKRISDLCKAA-GSWLVV  202 (400)
Q Consensus       174 ~nptG~~~~-~~~l~~i~~l~~~~-~~~li~  202 (400)
                      ...||..-. .+.+.++.+.++++ ++++++
T Consensus       164 ~GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v  194 (250)
T PLN02591        164 TGVTGARASVSGRVESLLQELKEVTDKPVAV  194 (250)
T ss_pred             CCCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence            667776422 45677766666664 666664

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=83.39  E-value=17  Score=31.04  Aligned_cols=101  Identities=15%  Similarity=0.255  Sum_probs=64.6

Q ss_pred             cEEEeCChHHHHHHHHHHhcCCCCE-------------EEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHH
Q 015768           91 SVMVTAGANQAFVNIVLTLCDAGDS-------------VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK  157 (400)
Q Consensus        91 ~i~~~~g~t~a~~~~~~~l~~~gd~-------------vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~  157 (400)
                      -+.+.+||-.++.++..++...-+.             .....|......-.++.+|..++.. ..+.. ..-..++|.+
T Consensus         3 ~~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~-~~~g~-~e~eve~L~~   80 (223)
T COG2102           3 VIALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTF-DTSGE-EEREVEELKE   80 (223)
T ss_pred             EEEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEE-ecCcc-chhhHHHHHH
Confidence            3678899999988777776532221             1111111111223456778887777 54431 1225778888


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV  201 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li  201 (400)
                      .+..-. ...|+       +|.+.+.....++-.+|++-|+..+
T Consensus        81 ~l~~l~-~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~  116 (223)
T COG2102          81 ALRRLK-VDGIV-------AGAIASEYQKERVERLCEELGLKVY  116 (223)
T ss_pred             HHHhCc-ccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence            776432 34555       7999999999999999999987765

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=82.66  E-value=18  Score=31.27  Aligned_cols=91  Identities=25%  Similarity=0.189  Sum_probs=52.1

Q ss_pred             hHHHHHHHHHHhcCCCCEE-EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768           98 ANQAFVNIVLTLCDAGDSV-VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (400)
Q Consensus        98 ~t~a~~~~~~~l~~~gd~v-lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np  176 (400)
                      |..+ ..++.+|.+++-.| ++..+.-......++..|++++.. +.+      |.+.|.+.++.-   ..|++..+...
T Consensus         8 G~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~-d~~------~~~~l~~al~g~---d~v~~~~~~~~   76 (233)
T PF05368_consen    8 GNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEA-DYD------DPESLVAALKGV---DAVFSVTPPSH   76 (233)
T ss_dssp             SHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES--TT-------HHHHHHHHTTC---SEEEEESSCSC
T ss_pred             cHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeec-ccC------CHHHHHHHHcCC---ceEEeecCcch
Confidence            4444 33444444456443 445544333445677889998765 332      788999999854   34454433222


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVV  202 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~  202 (400)
                         ....+....+++.|++.|+..++
T Consensus        77 ---~~~~~~~~~li~Aa~~agVk~~v   99 (233)
T PF05368_consen   77 ---PSELEQQKNLIDAAKAAGVKHFV   99 (233)
T ss_dssp             ---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred             ---hhhhhhhhhHHHhhhccccceEE
Confidence               23445578888888888876664

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]

Probab=81.23  E-value=15  Score=33.30  Aligned_cols=61  Identities=18%  Similarity=0.274  Sum_probs=39.8

Q ss_pred             CCCCCCHHHHHHhhc---c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768          146 KTLHPDADWLEKTLE---T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF  209 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~---~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~  209 (400)
                      .|..++.++++..++   . -....+|+++ .+=|.|  ++.+...++.++|++.|+.+++|.....+
T Consensus       107 ~Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~L  171 (310)
T COG1105         107 PGPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEAL  171 (310)
T ss_pred             CCCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence            355566666666544   2 1112445444 455555  45667999999999999999999886533

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	400
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		1e-33
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		5e-33
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		2e-32
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		1e-31
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		1e-31
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		1e-31
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		2e-31
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		5e-31
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		7e-31
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		5e-30
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		6e-23
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		5e-20
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		6e-20
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		2e-19
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		2e-18
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		2e-16
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		2e-16
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		5e-16
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		8e-16
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		2e-15
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		4e-14
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		4e-14
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		4e-14
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		4e-14
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		1e-13
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		2e-13
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		2e-13
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-13
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		4e-13
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		6e-13
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		9e-13
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		1e-12
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		3e-12
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		5e-12
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		1e-11
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		2e-11
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		2e-11
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		3e-11
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		3e-11
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		3e-11
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		4e-11
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		1e-10
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		1e-10
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-10
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-10
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		2e-10
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		3e-10
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		3e-10
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		8e-10
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		1e-09
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		1e-09
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		1e-09
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		2e-09
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		4e-09
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		5e-09
3qgu_A	449	L,L-Diaminopimelate Aminotransferase From Chalmydom		8e-09
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		9e-09
1vp4_A	425	Crystal Structure Of A Putative Aminotransferase (T		2e-08
1uu1_A	335	Complex Of Histidinol-Phosphate Aminotransferase (H		5e-08
2f8j_A	347	Crystal Structure Of Histidinol-phosphate Aminotran		5e-08
1h1c_A	335	Histidinol-Phosphate Aminotransferase (Hisc) From T		3e-07
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		2e-06
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		2e-06
3get_A	365	Crystal Structure Of Putative Histidinol-Phosphate		2e-06
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		2e-06
2zy5_A	546	R487a Mutant Of L-Aspartate Beta-Decarboxylase Leng		3e-06
2zy3_A	546	Dodecameric L-Aspartate Beta-Decarboxylase Length =		3e-06
3ly1_A	354	Crystal Structure Of Putative Histidinol-Phosphate		3e-06
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		6e-06
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		8e-06
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		9e-06
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		1e-05
2zy2_A	544	Dodecameric L-Aspartate Beta-Decarboxylase Length =		1e-05
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		2e-05
3l8a_A	421	Crystal Structure Of Metc From Streptococcus Mutans		5e-05
3fdd_A	533	The Crystal Structure Of The Pseudomonas Dacunhae A		6e-05
3p1t_A	337	Crystal Structure Of A Putative Aminotransferase (B		2e-04
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		3e-04
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		4e-04
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		5e-04

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 186/377 (49%), Gaps = 20/377 (5%)
Query: 21  QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG + GL ELR+A+ +K
Sbjct: 17  KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 75
Query: 81  LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           L ++N +    K+ +MV  GANQAF+  +      G+ V++  P + +   +  + G   
Sbjct: 76  LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 135
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
           + V          + D L+K +  K    +++  +P NP+G  + ++ L+ I+D      
Sbjct: 136 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 198 SWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252
             ++ D  YE+F+YD  +H  +       +  + +  FSK + M GWR+G++A PS +  
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 251
Query: 253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 310
              +++K Q     C     Q+ A  +L+    W  V E  K+  R R+++ + L+ +G 
Sbjct: 252 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 310
Query: 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 368
             VK  +GA Y++ R+ +  L   +    +     V V+PG A G    G++RIS+    
Sbjct: 311 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 369
Query: 369 EDDCKAAADRLRRGLEE 385
           E   + A DR+ R L+E
Sbjct: 370 E-KLEEAMDRMERVLKE 385

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score =  138 bits (348), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 186/377 (49%), Gaps = 20/377 (5%)
Query: 21  QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG + GL ELR+A+ +K
Sbjct: 16  KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 74
Query: 81  LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           L ++N +    K+ +MV  GANQAF+  +      G+ V++  P + +   +  + G   
Sbjct: 75  LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 134
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
           + V          + D L+K +  K    +++  +P NP+G  + ++ L+ I+D      
Sbjct: 135 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 198 SWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252
             ++ D  YE+F+YD  +H  +       +  + +  FSK + M GWR+G++A PS +  
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 250
Query: 253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 310
              +++K Q     C     Q+ A  +L+    W  V E  K+  R R+++ + L+ +G 
Sbjct: 251 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 309
Query: 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 368
             VK  +GA Y++ R+ +  L   +    +     V V+PG A G    G++RIS+    
Sbjct: 310 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 368
Query: 369 EDDCKAAADRLRRGLEE 385
           E   + A +R+ R L+E
Sbjct: 369 E-KLEEAMERMERVLKE 384

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 12/380 (3%)
Query: 10  RALETEMPIMVQIQ--ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           +A++ + P+ V  +  EL R   + V+L  G   +  P+   E  +  +     +KY   
Sbjct: 9   QAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPP 67
Query: 68  EGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
            G+PELR+AL +K  +EN L       +VT G +QA  N+   + D GD V++ +PY+ +
Sbjct: 68  AGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVS 127
Query: 126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185
                +  G   + V     +   PD + + + +   P  K + V +P NP+G   P+ +
Sbjct: 128 YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEV 185
Query: 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGY 243
           L+ ++ L      +LV D  YE+ +Y+G       V  +H + +   +KA+ M GWR+GY
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 244 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303
              P EV      + +     P   +  +   AL + +    +V    +   R R+++ E
Sbjct: 246 ACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLE 305
Query: 304 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 363
            L+ LG  AV+   GA Y+         D+      L    GV V+PG      GH+R+S
Sbjct: 306 GLTALGLKAVRPS-GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLS 363
Query: 364 FGGLVEDDCKAAADRLRRGL 383
           +    E++ + A +R  R L
Sbjct: 364 Y-ATSEENLRKALERFARVL 382

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 10/364 (2%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G +QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
            D  YE+ +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319
                P   +  +   AL + +    +V    +   R R+++ E L+ LG  AV+   GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379
            Y+         D+      L    GV V+PG      GH+R+S+    E++ + A +R 
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 380 RRGL 383
            R L
Sbjct: 379 ARVL 382

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 10/364 (2%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G +QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
            D  YE+ +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319
                P   +  +   AL + +    +V    +   R R+++ E L+ LG  AV+   GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379
            Y+         D+      L    GV V+PG      GH+R+S+    E++ + A +R 
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 380 RRGL 383
            R L
Sbjct: 379 ARVL 382

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 166/367 (45%), Gaps = 16/367 (4%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G +QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
            D  YE+ +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 260 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 316
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 377 DRLRRGL 383
           +R  R L
Sbjct: 376 ERFARVL 382

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 165/367 (44%), Gaps = 16/367 (4%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
            D  YE+ +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 260 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 316
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 377 DRLRRGL 383
           +R  R L
Sbjct: 376 ERFARVL 382

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score =  132 bits (331), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 181/380 (47%), Gaps = 20/380 (5%)
Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           ++++  +   M +  + + L++  ++ ++L  G   +  P+  +E+    +    + KY 
Sbjct: 17  RISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV-KYT 75
Query: 66  ADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
              G+ ELR+ + K++ +  K  +    V+VT GA QA  N  + L D GD V++F+P +
Sbjct: 76  DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVW 135
Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            +      + G T  +V    SK   P  + +E  L  K   K V + +P NP+G     
Sbjct: 136 VSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK--TKAVLINSPNNPTGVVYRR 193
Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---EG-DHVVNLFSFSKAYGMMGW 239
             L+ +  L K    +++ D  Y+  +Y       +   EG D +V +  FSK++ M GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           RVGY+    +V   AT + K+Q +   C + ++Q+ AL +L+    ++ +  K+    + 
Sbjct: 254 RVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE---RKN 307
Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
            + E L  +G   V+  EGA YL+ ++     DD +    L     V ++PG A    G 
Sbjct: 308 FVVERLKKMGVKFVE-PEGAFYLFFKV---RGDDVKFCERLLEEKKVALVPGSAFLKPGF 363
Query: 360 LRISFGGLVEDDCKAAADRL 379
           +R+SF   +E     A DR+
Sbjct: 364 VRLSFATSIE-RLTEALDRI 382

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score =  131 bits (329), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 16/367 (4%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
            D  YE+ +Y+G       V  +H + +   + A+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 260 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 316
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 377 DRLRRGL 383
           +R  R L
Sbjct: 376 ERFARVL 382

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 181/397 (45%), Gaps = 30/397 (7%)
Query: 6   KLAKRALETEMPIMVQIQELVRGAKNA-----VSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           KLA R +E+  P M  I +    A  A      S + G   +  PK  +E  K  + +  
Sbjct: 2   KLAAR-VESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAAL-EQG 59
Query: 61  ISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
            ++YG   G P LR+A+ +KL ++N L     +++VT G  Q+  N++L + + GD V++
Sbjct: 60  KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVII 119
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
            AP++ +     ++   T +++            + + + +   P  KL+    P NP+G
Sbjct: 120 PAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI--TPKTKLLVFNTPSNPTG 177
Query: 179 -TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG------DHVVNLFSFS 231
             Y P+ + + I+ +   AG W++ D  YE  +YD  +H  +        +  V    F+
Sbjct: 178 MVYTPDEV-RAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 291
           K Y M GWRVG++A P  +   AT   K+Q +        +Q+ A+ + +   + V E +
Sbjct: 237 KTYAMTGWRVGFLAGPVPLVKAAT---KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEML 293
Query: 292 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
                 R  + +AL+ +        +GA Y++  + +      +    L  +H V  +PG
Sbjct: 294 AAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPG 353
Query: 352 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
            A G    +R+S+   +        D ++RG+E L K
Sbjct: 354 AAFGADDCIRLSYATDL--------DTIKRGMERLEK 382

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 191/413 (46%), Gaps = 46/413 (11%)
Query: 6   KLAKRALETEMPI---MVQIQELVRGAKNAVSLAQG---VVYWQPPKMAMEKVKELVWDP 59
           + +KRAL  E  I   ++  +EL +     + L  G      +QPP+   E   + + + 
Sbjct: 11  RASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE- 69
Query: 60  SISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV 117
             + YG  EGLPELR A+V++  ++N   +    V VTA   +A   I   L D GD ++
Sbjct: 70  GHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEIL 129
Query: 118 MFAPYYFNSYMSFQMTGVTHILVG-PCSSKTL-----HPDADWLEKTLETKPTPKLVSVV 171
           +  P    SY  +  TG+     G P   +T+      PD D + K +  +   K ++V+
Sbjct: 130 VPGP----SYPPY--TGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRT--KAIAVI 181
Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVEGDHVVNLF 228
           NP NP+G    ++ L+ I ++       ++ D  Y+   Y+G         +   V+ + 
Sbjct: 182 NPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMN 241
Query: 229 SFSKAYGMMGWRVGYIAYP------SEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 282
             SK Y   GWR+GY+ +       SEV     +L +++    +C +  +Q  A+  L T
Sbjct: 242 GLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR----LCPNTPAQFAAIAGL-T 296
Query: 283 GP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---PEKHLDDFEVVR 338
           GP +++ E +K L   R+ I + L+ +   +    +GA Y++ ++   P K  +D E V 
Sbjct: 297 GPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWK--NDKEFVL 354
Query: 339 WLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389
            + H   V+ + G   G    GH R  F   +E   + A DR  + ++E +K+
Sbjct: 355 DVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFEKFMKERLKE 406

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 156/380 (41%), Gaps = 29/380 (7%)
Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  Q+  L +    A++L+QG   +  P+   E++   V     ++Y    G+  LR+A+
Sbjct: 19  IFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQ-GANQYAPMTGVQALREAI 76
Query: 78  VKKLNQENKLY------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
            +K     +LY       S + VTAGA +A    +  L   GD V+ F P Y +   +  
Sbjct: 77  AQK---TERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIA 133
Query: 132 MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           ++G    +V   + +  H   DW E         +LV +  P NPS T   +     +  
Sbjct: 134 LSGG---IVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQ 190
Query: 192 LCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAY 246
                  +++ D  YE+  +  + H  V       +  V + SF K Y M GW+VGY   
Sbjct: 191 AIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA 250
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
           P+ +   + ++ KV   +    +  +Q      L+  PE          + R+I+  AL+
Sbjct: 251 PAPI---SAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALN 307
Query: 307 PLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGA-CG---CRGHLR 361
                 +   EG  +L         LDD E  +WL   HGV  IP    C        +R
Sbjct: 308 E-SRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR 366
Query: 362 ISFGGLVEDDCKAAADRLRR 381
           + F    E    AAA+RLR+
Sbjct: 367 LCFAK-KESTLLAAAERLRQ 385

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 34/384 (8%)
Query: 27  RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86
           R  ++ + L+ G      P   +EK+  +        Y    G+P LR A+         
Sbjct: 34  RRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYD 93
Query: 87  LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
           +    +S  +VT G+ +   +++L   D GD++++  P Y        + G   I     
Sbjct: 94  VQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSY-----PIHIYGAV-IAGAQV 147
Query: 144 SSKTLHPDADW---LEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
            S  L P  D+   LE+ + E+ P P+++ +  P NP+   +     +R+  L K     
Sbjct: 148 RSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVM 207
Query: 200 LVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254
           +V D  Y   +YDG K   +       D  V  F+ SK+Y M GWR+G++    E+    
Sbjct: 208 VVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL---V 264
Query: 255 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314
           + L +++           Q  A+ +L+   + V +  +   + R+++ + L   G   V+
Sbjct: 265 SALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-WMVE 323
Query: 315 GGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC 372
             + ++Y+WA++PE   HL   E  + L     V V PG   G  G   + F  L+E+  
Sbjct: 324 NPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF-ALIEN-- 380
Query: 373 KAAADRLR---RGLEELVK-DGMV 392
               DRLR   RG++ + + DG++
Sbjct: 381 ---RDRLRQAVRGIKAMFRADGLL 401

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 173/395 (43%), Gaps = 46/395 (11%)
Query: 7   LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPK-MAMEKVKELVWDPSI 61
           L+KR L  E    M I+   Q+L    K  + L  G   +  PK +  E +K L      
Sbjct: 2   LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSL--KEGK 59
Query: 62  SKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           + Y    G+ ELR+ + +    + K  +   ++++T G++      + ++ D GD V++ 
Sbjct: 60  THYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQ 119
Query: 120 APYY--FNSYMSFQMTGVTHILVGPCSSKTLHPD--ADWLEKTLETKPTPKLVSVVNPGN 175
            P Y  + +++ F              +K +  D   + LE+ L  K   K + + +P N
Sbjct: 120 NPCYPCYKNFIRF------------LGAKPVFCDFTVESLEEALSDKT--KAIIINSPSN 165
Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH----VVNLFSFS 231
           P G  I     + I +       +++ D  Y   +Y+G+ +  +E D      + +  FS
Sbjct: 166 PLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFS 221
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW-VTER 290
             Y M GWR+GY+    E+      +LK+Q N+ I A  ISQ+ AL + +   E  +   
Sbjct: 222 XLYAMTGWRIGYVISNDEI---IEAILKLQQNLFISAPTISQYAALKAFEKETEREINSM 278
Query: 291 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350
           +K+  R R ++ + +   G   V    GA Y++  + E   D  E    L     V + P
Sbjct: 279 IKEFDRRRRLVLKYVKDFG-WEVNNPIGAYYVFPNIGE---DGREFAYKLLKEKFVALTP 334
Query: 351 GGACGCRG--HLRISFGGLVEDDCKAAADRLRRGL 383
           G   G +G  ++RIS+    E + K   +R++  L
Sbjct: 335 GIGFGSKGKNYIRISYANSYE-NIKEGLERIKEFL 368

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 40/362 (11%)
Query: 26  VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGADEGLPELRDALVKKLN 82
           + G +N    + G      P++  + +KELV D    ++  Y + +G  E R A+ + LN
Sbjct: 31  IVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLN 90
Query: 83  QENKLY--KSSVMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTG 134
             +  +    ++  T GA  +     L++C      DA D  +  APY F  Y  F    
Sbjct: 91  NTHGTHFNADNLYXTXGAAAS-----LSICFRALTSDAYDEFITIAPY-FPEYKVFVNAA 144
Query: 135 VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194
              ++  P  ++    D D LE+ +      + V + +P NPSGT   E  +K++SDL +
Sbjct: 145 GARLVEVPADTEHFQIDFDALEERINAHT--RGVIINSPNNPSGTVYSEETIKKLSDLLE 202
Query: 195 AAGS------WLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYIAY 246
                     +++ D  Y   +YDG K   V    D+ +  +S+SK+  + G R+GY+  
Sbjct: 203 KKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV 262
Query: 247 PSEV----EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302
           P EV    E +A      +    +CA  + Q   +       +  T  +     NR+++ 
Sbjct: 263 PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKC-----QGATGDINAYKENRDLLY 317
Query: 303 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 362
           E L+ +G    K  +GA Y + +  E   DD       A    V+++     GC G +RI
Sbjct: 318 EGLTRIGYHCFK-PDGAFYXFVKALE---DDSNAFCEKAKEEDVLIVAADGFGCPGWVRI 373
Query: 363 SF 364
           S+
Sbjct: 374 SY 375

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 13/223 (5%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS 90
            AV+L QG     PP   +E V+  +      +Y    GLP LR+AL ++   E +    
Sbjct: 26  GAVNLGQGFPSNPPPPFLLEAVRRALG--RQDQYAPPAGLPALREALAEEFAVEPE---- 79
Query: 91  SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTL 148
           SV+VT+GA +A   ++ +L   GD VV+  P +F+ Y+  +F       ++    + +  
Sbjct: 80  SVVVTSGATEALYVLLQSLVGPGDEVVVLEP-FFDVYLPDAFLAGAKARLVRLDLTPEGF 138
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208
             D   LEK L   P  + + +  P NP+G    ER L+ I+ L +A   +L+ D  Y+ 
Sbjct: 139 RLDLSALEKAL--TPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDE 196
Query: 209 FMYDGRKHCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
             Y  R     E   +    + S  K     G+RVG+I  P E
Sbjct: 197 LYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE 239

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 167/413 (40%), Gaps = 39/413 (9%)
Query: 8   AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           AKR    +  + V+  +L     + V+L QG     PP    E++ +  +  ++++Y   
Sbjct: 2   AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68  EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
            G P L  AL     K+ Q        ++V  GA  +  N +  L D GD V++  P+Y 
Sbjct: 61  FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
                 +M G   + + P  SK         +DW    + LE+K + K  +++   P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFS 231
            G     + L+ I+DLC    +  + D  YE+ +Y G  H  +       +  + + S  
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 285
           K + + GW++G+   P+ +      L  VQ N       P+ A++             PE
Sbjct: 240 KTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 286 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 335
            +     K+L   R+ +   L+ +G   +   GG   I     L A L + + D   D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
            V+W+     +  IP  A  C    +  F  LV   C    D      EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 166/395 (42%), Gaps = 49/395 (12%)
Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKL 87
           +  ++L QG   + PP+ A+++ ++ +  P +++Y    G P L ++L+K  +     +L
Sbjct: 57  RELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTEL 116
Query: 88  YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGP--- 142
              +V VT GAN+  ++ ++ L +AGD V++F P++     + ++ G  V ++ + P   
Sbjct: 117 KAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKE 176
Query: 143 -----CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
                   +    D +  EK + +K   K V +  P NP G       L  + ++C    
Sbjct: 177 LDQRNTRGEEWTIDFEQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234
Query: 198 SWLVVDNTYE--YFMYDGRKHCCVE---GDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVE 251
             ++ D  YE  YF     +   +    G   + + S   ++   GWR+G++ +  +E+ 
Sbjct: 235 VVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELL 294
Query: 252 GFATQL---LKVQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
            +A +    +      P+   CA+ I+  L +        +  +  ++ +   +I     
Sbjct: 295 SYAAKAHTRICFASPSPLQEACANSINDALKI-------GYFEKMRQEYINKFKIFTSIF 347
Query: 306 SPLGEGAVKGGEGAIYLWARL-----------PEKHLD---DFEVVRWLAHRHGVVVIPG 351
             LG       EG  ++               PE+ L+   DF +  WL +  GVV IP 
Sbjct: 348 DELGL-PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPP 406
Query: 352 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
                + H + +   L    CK  A  L   +E L
Sbjct: 407 TEFYIKEHEKAAENLLRFAVCKDDA-YLENAVERL 440

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 166/413 (40%), Gaps = 39/413 (9%)
Query: 8   AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           AKR    +  + V+  +L     + V+L QG     PP    E++ +  +  ++++Y   
Sbjct: 2   AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68  EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
            G P L  AL     K+ Q        ++V  GA  +  N +  L D GD V++  P+Y 
Sbjct: 61  FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
                 +M G   + + P  SK         +DW    + LE+K + K  +++   P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFS 231
            G     + L+ I+DLC    +  + D  YE+ +Y G  H  +       +  + + S  
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 285
             + + GW++G+   P+ +      L  VQ N       P+ A++             PE
Sbjct: 240 XTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 286 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 335
            +     K+L   R+ +   L+ +G   +   GG   I     L A L + + D   D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
            V+W+     +  IP  A  C    +  F  LV   C    D      EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 143/351 (40%), Gaps = 40/351 (11%)
Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA--- 120
           YG ++G   LR A+ +   ++  +  + V V+ GA      + L L   G +V +     
Sbjct: 108 YGLEQGNKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLL---GSNVTIAVQDP 164
Query: 121 --PYYFNSYMSFQMTGVTH--------ILVGPCS-SKTLHPDADWLEKTLETKPTPKLVS 169
             P Y +S +    TG  H        ++  PC  + +  PD       L   P   ++ 
Sbjct: 165 TFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPD-------LAMTPRTDVIF 217
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE----GDHVV 225
             +P NP+G     + L ++ D  K  GS ++ D+ Y  F+ DG      E     +  +
Sbjct: 218 FCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAI 277
Query: 226 NLFSFSKAYGMMGWRVGYIAYPSEV---EGFA--TQLLKVQDNIPICASIISQHLALYSL 280
            + SFSK  G  G R+G+   P E+    GF       ++       AS I+Q   L  L
Sbjct: 278 EVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACL 337
Query: 281 QTGPEWVTERVKDLVR-NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 339
            +G       V +  + NR+I+ + L  LG   V GG  A YLW     K    ++V   
Sbjct: 338 SSGGLKEIRSVNNYYKENRKILMDTLVSLGL-KVYGGVNAPYLWVHF--KGSKSWDVFNE 394
Query: 340 LAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCKAAADRLRRGLEELVK 388
           +     ++ +PG   G  G  +LRIS  G   D    A+ RL+       K
Sbjct: 395 ILENTHIITVPGSGFGPGGEEYLRISGFGR-RDHIVEASKRLQNFFNTRTK 444

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 23/240 (9%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
           + V+L QG   + PP  A+E  +  V  D  +++Y    G P L   L     + L QE 
Sbjct: 29  DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
              ++ V+VT G   A       L D GD V++  P+ F+ Y     M G   + V    
Sbjct: 89  DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEPF-FDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           GP  +  L   ++W    +E     T  T  LV +  P NP G       L+ ++ LC+ 
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
                + D  Y++ +YDG +H  +       +  + + S  K +   GW+VG++  P  +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI 265

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 36/406 (8%)
Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
            +K+ALE     + ++ +LV  + + +SLA G+    P     E +++++      +   
Sbjct: 54  FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 110
Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
             +YG  +G   LR+ L+K L +   + + + +M+T+G+ QA   I     + GD VV+ 
Sbjct: 111 ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 170
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNP----G 174
           AP Y  +  +F      +I + P   + +    + LE+ L E K   K V VV       
Sbjct: 171 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 227
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----DHVVNLFSF 230
           NP+G  + E   K + +L       +V D+ Y    Y G     ++       V+ L +F
Sbjct: 228 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 287
Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 288
           SK     G+R+G++       G   ++   + +  +C ++  Q +A   +  G   + + 
Sbjct: 288 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 343
Query: 289 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346
           E  K     R+ + EAL       VK    EG +++W  LP+  +D  +++   A + GV
Sbjct: 344 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 401
Query: 347 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
             +PG A       +  +R++F  + ED       RL   ++E +K
Sbjct: 402 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 143/336 (42%), Gaps = 38/336 (11%)
Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           YG D GLP LR  L +   +   +    + ++ GA      + L+      +V +  P Y
Sbjct: 71  YGPDFGLPALRQKLSEDFYR-GFVDAKEIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSY 128
Query: 124 FNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182
             +Y+   ++TG   I+  PC    L  +A + E   +T     ++ + +P NP+GT + 
Sbjct: 129 -PAYLDIARLTGAKEIIALPC----LQENAFFPEFPEDTHI--DILCLCSPNNPTGTVLN 181
Query: 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYD-----------GRKHCCVEGDHVVNLFSFS 231
           +  L+ I          ++ D  Y  F+ D             + C +E    +N  SFS
Sbjct: 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE----IN--SFS 235
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------NIPICASIISQHLALYSLQTGPE 285
           K  G  G R+G+   P E+  +A     +QD           ASI +Q   +  L   P+
Sbjct: 236 KPLGFAGIRLGWTVIPQELT-YADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQ 294
Query: 286 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345
              E +     N +++R+AL   G   V GGE A YLW +  + ++ D ++  +    + 
Sbjct: 295 L--EAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYH 351
Query: 346 VVVIPGGACGCRGHLRISFGGL-VEDDCKAAADRLR 380
           + + PG   G  G   + F  L   +D  AA +RL+
Sbjct: 352 IAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 36/406 (8%)
Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
            +K+ALE     + ++ +LV  + + +SLA G+    P     E +++++      +   
Sbjct: 9   FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 65
Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
             +YG  +G   LR+ L+K L +   + + + +M+T+G+ QA   I     + GD VV+ 
Sbjct: 66  ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 125
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVV----NPG 174
           AP Y  +  +F      +I + P   + +    + LE+ L E K   K V VV       
Sbjct: 126 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 182
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----DHVVNLFSF 230
           NP+G  + E   K + +L       +V D+ Y    Y G     ++       V+ L +F
Sbjct: 183 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 242
Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 288
           SK     G+R+G++       G   ++   + +  +C ++  Q +A   +  G   + + 
Sbjct: 243 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 298
Query: 289 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346
           E  K     R+ + EAL       VK    EG +++W  LP+  +D  +++   A + GV
Sbjct: 299 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 356
Query: 347 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
             +PG A       +  +R++F  + ED       RL   ++E +K
Sbjct: 357 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 402

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 161/391 (41%), Gaps = 47/391 (12%)
Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
           M +   L KR   +   + V+  +L    K  ++L QG   +  PK A+  +       D
Sbjct: 9   MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59  PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
           P  ++Y    G P L  AL K  +Q      N +  + V+VT GA +A    +    D G
Sbjct: 68  PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
           D V++  P+ F+ Y  M     G+   + + P  +      ADW      LE     K  
Sbjct: 126 DEVIIIEPF-FDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKT- 183
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVEG 221
            K++ +  P NP G  +    L+ +++LCK      V D  YE+ +++  +H   C + G
Sbjct: 184 -KMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 222 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 276
             +  + + S  K + + GW++G+   P   E     L  V  N +  CA+ I + +A  
Sbjct: 243 MWERTITIGSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 277 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 329
               L  L++   +      +L+  R+ +   L+ +G      +GG   +  W+ L  K 
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 330 -------HLDDFEVVRWLAHRHGVVVIPGGA 353
                     D+   +W+    G+  IP  A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 147/353 (41%), Gaps = 34/353 (9%)
Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLYKSSVMVTAGANQAF 102
           P+ A+E + + +   ++  Y    GLP LR  + +   +     L    V++T G++  F
Sbjct: 46  PRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF 104
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLET 161
           +     L D+GD V + AP Y +     +  G+  + +       L P  AD+    L  
Sbjct: 105 LLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAG 164
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE- 220
                 + V +P NP+GT +       + +  +A G+  + D  Y    Y+ +    +E 
Sbjct: 165 ------LXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL 218
Query: 221 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280
            D    + SFSK +   GWRVG+   P   E     + ++  N  ICA   SQ  AL +L
Sbjct: 219 TDECYVINSFSKYFSXTGWRVGWXVVP---EDQVRVVERIAQNXFICAPHASQVAALAAL 275
Query: 281 QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 340
               E +   +     NR++  E L   G   +   +GA Y++A + +   D       +
Sbjct: 276 DCDAE-LQANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI 334
Query: 341 AHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
             + GV V PG       GA    G LR S+        +A AD +  GL+ L
Sbjct: 335 LEKAGVAVTPGLDFDPERGA----GTLRFSY-------ARATAD-IEEGLDRL 375

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
           + V+L QG   + PP  A+E  +  V  D  +++Y    G P L   L     + L QE 
Sbjct: 29  DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
              ++ V+VT G   A       L D GD V++  P+ F+ Y     M G   + V    
Sbjct: 89  DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEPF-FDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           GP  +  L   ++W    +E     T  T  LV +  P NP G       L+ ++ LC+ 
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
                + D  Y++ +YDG +H  +       +  + + S    +   GW+VG++  P  +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
           + V+L QG   + PP  A+E  +  V  D  +++Y    G P L   L     + L QE 
Sbjct: 29  DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
              ++ V+VT G   A       L D GD V++  P+ F+ Y     M G   + V    
Sbjct: 89  DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEPF-FDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           GP  +  L   ++W    +E     T  T  LV +  P NP G       L+ ++ LC+ 
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
                + D  Y++ +YDG +H  +       +  + + S    +   GW+VG++  P  +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 160/391 (40%), Gaps = 47/391 (12%)
Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
           M +   L KR   +   + V+  +L    K  ++L QG   +  PK A+  +       D
Sbjct: 9   MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59  PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
           P  ++Y    G P L  AL K  +Q      N +  + V+VT GA +A    +    D G
Sbjct: 68  PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
           D V++  P+ F+ Y  M     G+   + + P  +      ADW      LE     K  
Sbjct: 126 DEVIIIEPF-FDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKT- 183
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVEG 221
            K++ +  P NP G  +    L+ +++LCK      V D  YE+ +++  +H   C + G
Sbjct: 184 -KMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 222 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 276
             +  + + S    + + GW++G+   P   E     L  V  N +  CA+ I + +A  
Sbjct: 243 MWERTITIGSAGXTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 277 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 329
               L  L++   +      +L+  R+ +   L+ +G      +GG   +  W+ L  K 
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 330 -------HLDDFEVVRWLAHRHGVVVIPGGA 353
                     D+   +W+    G+  IP  A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 152/353 (43%), Gaps = 28/353 (7%)
Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVW-DPSISKYGADEGLPELR 74
           +M +  EL +     +SLA G    +  P  +  E  KE++  +P    Y    G+PELR
Sbjct: 22  VMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELR 81
Query: 75  DALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
           + L   L + + L  S  ++++T G   A   +   L D GD V+   P Y N+ ++F+ 
Sbjct: 82  EELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQ 141
Query: 133 TGVTHILVGPCSSKTLHPDADWLE---KTLETKPTP-KLVSVVNPG-NPSGTYIPERLLK 187
            G   I   P  +  +    D LE   K L+ K    KL+  +  G NP G  +     K
Sbjct: 142 LG-AKIEGVPVDNDGMR--VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRK 198
Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDG-----RKHCCVEGDHVVNLFSFSKAYGMMGWRVG 242
            + ++       ++ D  Y +  Y+G      K    EG  V+   + SK  G  G+R+G
Sbjct: 199 ALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEG-RVIVAGTLSKVLG-TGFRIG 256
Query: 243 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNRE 299
           +I    E+     ++L  +  I  CA  ISQ++AL  L+ G      +   +      R+
Sbjct: 257 WIIAEGEI---LKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRD 313
Query: 300 IIREAL-SPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
           I+ +AL + L           +++   LPE   D       L  R GVVV+PG
Sbjct: 314 IMLKALENHLPNAEFTKPIAGMFVMFFLPEGA-DGISFANELMEREGVVVVPG 365

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 30/309 (9%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--KLNQENKLYKSSVMVTAGANQ 100
           + P++  E++ E    P +  Y    G+ ELR+A     K  Q   +   +V+VT G ++
Sbjct: 56  KTPEVFFERIYE--NKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSE 113
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
           A +     + + GD +++  P+Y N     ++ GV  I   P + +     A  + + LE
Sbjct: 114 AILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLI---PVTRRXEEGFA--IPQNLE 168
Query: 161 TKPTPKLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH 216
           +    +   +V  NP NP+G    +   + + ++ +  G +L+VD  Y   ++ G     
Sbjct: 169 SFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA 228
Query: 217 CCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHL 275
             +E D VV + S S  +   G RVG  I    E+   A +L + +   P+   I S  +
Sbjct: 229 LSIESDKVVVIDSVSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGS--V 286
Query: 276 ALYSLQTGPEWVTERVKDLVRN--REIIREALSPLGEGAVK---GGEGAIYLWARLPEKH 330
            L +L        +   D VR   RE +   L  L E  +K      GA Y+ A LP + 
Sbjct: 287 GLLNLD-------DSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVED 339
Query: 331 LDDFEVVRW 339
            ++F   RW
Sbjct: 340 AEEF--ARW 346

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 31/314 (9%)
Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD 151
           V++T G+ QA   +     D G  V++ AP Y  +  +F++ G   + V P   +   PD
Sbjct: 94  VLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PD 150
Query: 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFM 210
            D LE+ L+ +    L  + +  NP+G   P    KR+  +    G  +V D+ Y E + 
Sbjct: 151 LDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYF 210
Query: 211 YDGRKHCCVEGDH------VVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN 263
            + R     E         V+ L SFSK     G RV + +A+P  ++    +L++ +  
Sbjct: 211 GEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQ----KLVQAKQG 265
Query: 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR------EIIREALSPLGEGAVKGGE 317
             +   +++Q L    L+ G     ERV+ + R +       + RE    +     KGG 
Sbjct: 266 ADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG- 324
Query: 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCK 373
             +++W  LP K L    + R  A    V  +PGG      G    LR+S+  L  +   
Sbjct: 325 --MFVWMELP-KGLSAEGLFRR-ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIA 380
Query: 374 AAADRLRRGLEELV 387
               RL R L+ L+
Sbjct: 381 EGVRRLGRALKGLL 394

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 43/337 (12%)
Query: 63  KYGADEGLPELRDALVKKLNQENKLYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
            YG  EG P  + ++       ++LY       ++ T GA  A + ++ +L + GD V+ 
Sbjct: 58  NYGWIEGSPAFKKSV-------SQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVIS 110
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
             P Y   Y   +  G    L          PD + L + +  +PT K + + N  NP+G
Sbjct: 111 LYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI--RPTTKXICINNANNPTG 168
Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238
                  L+ + ++    G++++ D  Y  F            D  + + S S  Y + G
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSXTYSLPG 228
Query: 239 WRVGYIAYPSEVEGFATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 297
            R+G++A   +V    T +L+  +D   ICA +    +A  +L    E        L RN
Sbjct: 229 IRIGWVAANHQV----TDILRDYRDYTXICAGVFDDLVAQLALAHYQEI-------LERN 277
Query: 298 REIIREALSPLGE--------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 349
           R I+ E L+ L +          ++    +        +   +DF     L   HGV+++
Sbjct: 278 RHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDXPXEDF--CLQLLQEHGVLLV 335
Query: 350 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           PG      G++R+ F       C+   + L +GLE+L
Sbjct: 336 PGNRFERDGYVRLGFA------CE--QETLIKGLEKL 364

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 21/273 (7%)
Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK 146
           ++ V+VT GA +A    VL L + G  V++  P+Y +SY         H +  P     +
Sbjct: 86  ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFY-DSYSPVVAMAGAHRVTVPLVPDGR 144
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               DAD L + +   P  + + + +P NP+G  +    L  I+++  AA   ++ D  Y
Sbjct: 145 GFALDADALRRAV--TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVY 202
Query: 207 EYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGF--ATQLL 258
           E+ ++D  +H  + G     +  + + S +  +   GW++G+   P+E + G   A Q L
Sbjct: 203 EHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQYL 262
Query: 259 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318
                 P       Q     +L T   WV      L   R+ +   L+ +G  AV    G
Sbjct: 263 SYVGGAPF------QPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGF-AVHDSYG 315
Query: 319 AIYLWAR-LPEKHLDDFEVVRWLAHRHGVVVIP 350
             +L A   P  + D  E    L  + GV  IP
Sbjct: 316 TYFLCADPRPLGYDDSTEFCAALPEKVGVAAIP 348

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 144/358 (40%), Gaps = 22/358 (6%)
Query: 33  VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---K 89
           ++ A G+     P+  ++  ++ +  P   KYGA  G    + A+V    ++  +    +
Sbjct: 50  INXAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKE 109
Query: 90  SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
             V +  G     V +   + + GD V++  P Y +      +     +   P + +  H
Sbjct: 110 DEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPV---PLNLEPPH 166
Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209
              DW +   +     KL+ +  P NP+G+   + +        K   + +V D  Y  F
Sbjct: 167 YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF 226
Query: 210 MYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265
            +D +    +      D  + ++S SK Y   G+RVG+     +       L K Q +  
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDX---IQALKKYQTHTN 283
Query: 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
                  Q  A+Y+L    +++ E+  ++ + R    EA     +      +G IY+W  
Sbjct: 284 AGXFGALQDAAIYALNHYDDFLEEQ-SNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLE 342
Query: 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCK--AAADRL 379
            P  + D  +  ++L     ++V PG   G  G  ++RIS   L  DD K   AA RL
Sbjct: 343 TPPGY-DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRIS---LALDDQKLDEAAIRL 396

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 48/359 (13%)
Query: 60  SISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGDS 115
           +I+ +    GLPE R A+ K + +      +     V++  GA  A   I+  L D GD+
Sbjct: 75  AIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA 134
Query: 116 VVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL----VS 169
            ++ +PYY  FN  + ++ TGV  I +   SS      +  +++  E      +    + 
Sbjct: 135 FLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-------------- 215
           + NP NP GT + +  LK +          LV D  Y   ++D  +              
Sbjct: 194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMT 253
Query: 216 HCCVEGDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVEGFATQ-----LLKVQDNIPICAS 269
           +C  +  H+V  +S SK  G+ G+RVG I ++  +V   A +     L+  Q    + A 
Sbjct: 254 YCNKDLVHIV--YSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAM 311
Query: 270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR---- 325
           +  +      L+     + +R K      E++       G   +K   G ++ W      
Sbjct: 312 LSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-------GIKCLKNNAG-LFCWMDLRPL 363
Query: 326 LPEKHLD-DFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRR 381
           L E   D +  + R + +   + V PG +  C+  G  R+ F  + +     A  R+RR
Sbjct: 364 LRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 422

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
            P   A +K  E ++   ++ +    GLP  + A+V  + +   NK+    + +++TAGA
Sbjct: 60  NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 118
Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
             A    +  L D G++V++  PYY  F+  + ++ TGV  + +   SS         LE
Sbjct: 119 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 177
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212
           +  +      L    V V NP NP GT +    L  +    +  G  L+ D  Y    + 
Sbjct: 178 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 237
Query: 213 G----------RKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 255
                      +   C E        HVV  +S SK  G+ G+RVG I    + V   AT
Sbjct: 238 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 295
Query: 256 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312
           ++           S  +QHL    L   +    ++ E  K L + ++ +   L   G   
Sbjct: 296 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 350
Query: 313 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 363
           + G  G ++ W  +  +HL        + E+ + + +   + + PG +C C   G  R+ 
Sbjct: 351 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 407
Query: 364 FGGLVEDDCKAAADRLR 380
           F  L E     A  RL+
Sbjct: 408 FANLPERTLDLAMQRLK 424

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
            P   A +K  E ++   ++ +    GLP  + A+V  + +   NK+    + +++TAGA
Sbjct: 62  NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
             A    +  L D G++V++  PYY  F+  + ++ TGV  + +   SS         LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212
           +  +      L    V V NP NP GT +    L  +    +  G  L+ D  Y    + 
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 213 G----------RKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 255
                      +   C E        HVV  +S SK  G+ G+RVG I    + V   AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 256 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312
           ++           S  +QHL    L   +    ++ E  K L + ++ +   L   G   
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 313 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 363
           + G  G ++ W  +  +HL        + E+ + + +   + + PG +C C   G  R+ 
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 364 FGGLVEDDCKAAADRLR 380
           F  L E     A  RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 47/348 (13%)
Query: 61  ISKYGADEGLPELRDA----LVKKLNQENKLYKSSVMVTAGANQA---FVNIVLTLCDAG 113
           + KY    GLPELR A    L ++ +       + ++   G+ +A   FV  VL     G
Sbjct: 59  LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDG 118
Query: 114 DSVVMFAPY-YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172
               + +P  ++  Y    + G   I    C + + +PD  W   + E     KLV V +
Sbjct: 119 IKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPD--WRSISEEVWKRTKLVFVCS 176
Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEG--------DH 223
           P NPSG+ +     K + DL    G  +  D  Y    +DG K   C++           
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK 236
Query: 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 283
           ++   S S    + G R G++A  +E+       L  +       SI  Q  ++ +    
Sbjct: 237 LLXFTSLSXRSNVPGLRSGFVAGDAEL---LKNFLLYRTYHGSAXSIPVQRASIAA---- 289
Query: 284 PEWVTERVKDLVRNREIIREALS---PLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVR 338
             W  E  + ++ NR + +E      P+ +    VK  + + Y+W ++P+   DD    R
Sbjct: 290 --WDDE--QHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPDG--DDLAFAR 343
Query: 339 WLAHRHGVVVIPG---------GACGCRGHLRISFGGLVEDDCKAAAD 377
            L  +  + V+PG         G  G  G++RI+    V    KAA D
Sbjct: 344 NLWQKAAIQVLPGRFLARDTEQGNPG-EGYVRIALVADVATCVKAAED 390

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
            P   A +K  E ++   ++ +    GLP  + A+V  + +   NK+    + +++TAGA
Sbjct: 62  NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
             A    +  L D G++V++  PYY  F+  + ++ TGV  + +   SS         LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212
           +  +      L    V V NP NP GT +    L  +    +  G  L+ D  Y    + 
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 213 G----------RKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 255
                      +   C E        HVV  +S SK  G+ G+RVG I    + V   AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 256 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312
           ++           S  +QHL    L   +    ++ E  K L + ++ +   L   G   
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 313 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 363
           + G  G ++ W  +  +HL        + E+ + + +   + + PG +C C   G  R+ 
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 364 FGGLVEDDCKAAADRLR 380
           F  L E     A  RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 171/397 (43%), Gaps = 42/397 (10%)
Query: 21  QIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD------PSISKYGADEGLPE 72
           +++EL++     + +SLA G+    P    +E +K++  +          +YG  +G   
Sbjct: 30  EVRELLKLVETSDVISLAGGLP--APETFPVETIKKIAVEVLEEHADKALQYGTTKGFTP 87
Query: 73  LRDALVKKLNQ--ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
           LR AL + + +  +  + K  +M  AG+ QA   I     + GD +V+ AP Y  +  +F
Sbjct: 88  LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAF 147
Query: 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK---LVSVVNPGNPSGTYIPERLLK 187
           +      I + P   K +  D    +     K   +   + +V    NP+G  +     K
Sbjct: 148 KYYDPEFISI-PLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRK 206
Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDGR-----KHCCVEGDHVVNLFSFSKAYGMMGWRVG 242
           ++ +L       +V D  Y    Y G      KH    G  V+ L +FSK     G+R+G
Sbjct: 207 KLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYG-RVIYLGTFSKILA-PGFRIG 264
Query: 243 YI-AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR----N 297
           ++ A+P  +     ++   + +I +C +   Q +A   ++ G  ++ E +  ++      
Sbjct: 265 WVAAHPHLIR----KMEIAKQSIDLCTNTFGQAIAWKYVENG--YLDEHIPKIIEFYKPR 318
Query: 298 REIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 355
           R+ + EAL       V+    EG +++   LPE    D +++   A   GV  +PG A  
Sbjct: 319 RDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGI--DTKLMMERAVAKGVAYVPGEAFF 376
Query: 356 C----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
                +  +R++F  + E+  +    RL   ++E +K
Sbjct: 377 VHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMK 413

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 118/308 (38%), Gaps = 43/308 (13%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA           
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
           CD     VMF             P Y +S +    TG  +  V   G        P+  +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
               L T     ++   +P NP+G       L ++ +  K  GS +V D+ Y  +M D  
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 215 KHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 267
                E     +  +   SFSK  G  G R+G+   P ++   +GF    +    N  IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 268 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321
                AS ISQ  AL  L   G E + + +     N  II +  + LG   V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 322 LWARLPEK 329
           +W   P +
Sbjct: 365 VWVHFPNQ 372

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 134/353 (37%), Gaps = 34/353 (9%)
Query: 22  IQELVRGAK---NAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           ++ L+RGA      V  + G V   +P   A +     V    +  Y    G   +RD L
Sbjct: 28  LEALIRGAPIEGRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLL 87
Query: 78  VKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF--NSYMSFQM 132
             +L          +  +++T G   A    V      GD V +  P YF     + F  
Sbjct: 88  APRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFE 147
Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
                + +   S+       D        K   ++    NP NP+G       + +I+ L
Sbjct: 148 GEXVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAAL 207
Query: 193 CKAAGSWLVVDNTYEYFMYDG------RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 246
               G+ ++ D  Y    Y G      R    V+ ++VV +   S    + G+R+G +A+
Sbjct: 208 AARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG-VAF 266
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
            S       +  K+Q  + + A+  SQ +        P W  +R+    R++ I  E L 
Sbjct: 267 GSRA--IIARXEKLQAIVSLRAAGYSQAVLRGWFDEAPGWXEDRI---ARHQAIRDELLH 321
Query: 307 PLGEGAVKGGEGAI--------YLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
            L     +G EG          YL+ RLP+  +   E V+ L  + GVVV PG
Sbjct: 322 VL-----RGXEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPG 369

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEK--- 157
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD+  D L +   
Sbjct: 122 XKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 158 ---TLETKPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD- 212
                  K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y +  ++ 
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 213 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269
           GR    +  D    V+   SFSK     G R+G++  P  +       ++V    P   +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 270 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 322
             +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 323 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 376
           W ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A 
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 377 DRLRRGLEE 385
             L + ++E
Sbjct: 415 QVLAQLIKE 423

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD- 212
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y +  ++ 
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 213 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269
           GR    +  D    V+   SFSK     G R+G++  P  +       ++V    P   +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 270 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 322
             +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 323 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 376
           W ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A 
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 377 DRLRRGLEE 385
             L + ++E
Sbjct: 415 QVLAQLIKE 423

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 118/308 (38%), Gaps = 43/308 (13%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA           
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
           CD     VMF             P Y +S +    TG  +  V   G        P+  +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
               L T     ++   +P NP+G       L ++ +  K  GS +V D+ Y  +M D  
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 215 KHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 267
                E     +  +   SFS+  G  G R+G+   P ++   +GF    +    N  IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 268 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321
                AS ISQ  AL  L   G E + + +     N  II +  + LG   V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 322 LWARLPEK 329
           +W   P +
Sbjct: 365 VWVHFPNQ 372

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 117/308 (37%), Gaps = 43/308 (13%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA           
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
           CD     VMF             P Y +S +    TG  +  V   G        P+  +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
               L T     ++   +P NP+G       L ++ +  K  GS +V D+ Y  +M D  
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 215 KHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 267
                E     +  +   SFS   G  G R+G+   P ++   +GF    +    N  IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 268 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321
                AS ISQ  AL  L   G E + + +     N  II +  + LG   V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 322 LWARLPEK 329
           +W   P +
Sbjct: 365 VWVHFPNQ 372

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 134/331 (40%), Gaps = 43/331 (12%)
Query: 33  VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---- 88
           + L+ G     PP+  ++ + E + DP+   Y        L+   +  L +  + Y    
Sbjct: 28  IDLSIGSTDLPPPEAPLKALAEALNDPTTYGYC-------LKSCTLPFLEEAARWYEGRY 80
Query: 89  ------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
                 +   +   G+ +   +++L L +  D +++     + SY            + P
Sbjct: 81  GVGLDPRREALALIGSQEGLAHLLLALTEPED-LLLLPEVAYPSYFGAARVASLRTFLIP 139
Query: 143 CSSKTLH-----PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
                L      P+  W E         K++ +  P NP+G        +    L +  G
Sbjct: 140 LREDGLADLKAVPEGVWREA--------KVLLLNYPNNPTGAVADWGYFEEALGLARKHG 191
Query: 198 SWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253
            WL+ DN Y   +Y+G     +      + VV LFS SK+Y + G+R+G+ A  SE E  
Sbjct: 192 LWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGF-ALGSE-EAL 249
Query: 254 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI-IREALSPLGEGA 312
           A +L +V+  I          + + +L+T P+ V      + R R + + EAL   G  +
Sbjct: 250 A-RLERVKGVIDFNQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALK--GVLS 305
Query: 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343
           +      +YLW RLPE  +DD E    L  R
Sbjct: 306 LLPPRATMYLWGRLPE-GVDDLEFGLRLVER 335

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEK--- 157
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD+  D L +   
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 158 ---TLETKPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
                  K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y +  ++ 
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
            +        V+G  V+   SFSK     G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y +  ++ 
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
            +        V+G  V+   SFSK     G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y +  ++ 
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
            +        V+G  V+   SFSK     G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 85/383 (22%)
Query: 43  QPPKMAMEKVKELVWDPSISK---------------YGADEGLPELRDALVKKLNQENKL 87
            P  +  E++K L    SIS+               Y   +G+  LRDA+   +   +  
Sbjct: 94  HPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGF 153
Query: 88  YKSS--VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
             ++  + +T GA+   V++++ L   +  D +++  P Y     S  + G      G  
Sbjct: 154 PANADDIFLTDGASPG-VHLMMQLLIRNEKDGILVPIPQYPLYSASIALHG------GAL 206
Query: 144 SSKTLHPDADW------LEKTLETKPTP----KLVSVVNPGNPSGTYIPERLLKRISDLC 193
               L+    W      ++K LE   +     + + V+NPGNP+G  + E     I   C
Sbjct: 207 VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFC 266
Query: 194 KAAGSWLVVDNTYEYFMY-DGRKHCCVE--------GDHVVNLFSFSKA----YGMMGWR 240
           K  G  L+ D  Y+  +Y D +K    +        G+  + L S+       YG  G R
Sbjct: 267 KNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKR 326
Query: 241 VGYIAYPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGPEWVTER------ 290
            GY     E+ GF+     Q+ K+  ++ +C++I  Q LA  SL   P   ++       
Sbjct: 327 GGYF----EITGFSAPVREQIYKIA-SVNLCSNITGQILA--SLVMNPPKASDESYASYK 379
Query: 291 ------VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR--LPEKHL----------D 332
                 +  L R  + +  A + L        EGA+Y++ +  LP+K +          D
Sbjct: 380 AEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPD 439
Query: 333 DFEVVRWLAHRHGVVVIPGGACG 355
            F  +R L    G+VV+PG   G
Sbjct: 440 AFYALRLL-ESTGIVVVPGSGFG 461

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 178/430 (41%), Gaps = 55/430 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 4   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 63
Query: 56  VWDPSISK----YGADEGLPELRDAL----VKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL   L    +K  N     Y  S     + VT+G+ Q  
Sbjct: 64  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 123
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 124 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 182
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y +  ++ 
Sbjct: 183 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 242
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
            +        V+G  V+   SFS      G R+G++  P  +       ++V    P   
Sbjct: 243 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 300
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 301 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 357
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 358 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 415
Query: 376 ADRLRRGLEE 385
              L + ++E
Sbjct: 416 FQVLAQLIKE 425

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 178/430 (41%), Gaps = 55/430 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPELRDAL----VKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL   L    +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y +  ++ 
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
            +        V+G  V+   SFS      G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas Reinhardtii Length = 449

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 132/340 (38%), Gaps = 50/340 (14%)
Query: 62  SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA- 120
           S YGA++G   LR+A+              + ++ G+           CD     +MF  
Sbjct: 105 SGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSK----------CDIARIQMMFGS 154
Query: 121 -----------PYYFNSYMSFQMTGVTHILVGPCSSKTL--HPDADWLEKTLETKPTPKL 167
                      P Y ++ +   MTG  H   G    + +  +PD  +     + K T  +
Sbjct: 155 KPTVAVQDPSYPVYVDTSVMMGMTG-DHNGTGFDGIEYMVCNPDNHFFPDLSKAKRT-DI 212
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC------CVEG 221
           +   +P NP+G       L  + +  +  GS LV D  Y   +Y     C          
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYA--LYISNPDCPKTIYEIPGA 270
Query: 222 DHV-VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--IPIC---ASIISQHL 275
           D V +   SFSK  G  G R+G+   P  ++    + +    N  +  C   AS I Q  
Sbjct: 271 DEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAG 330
Query: 276 ALYSLQTGPEWVTE---RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 332
            L  LQ  PE + E    +K    N +I++   + +G  +V GG+ A Y+W   P K   
Sbjct: 331 GLACLQ--PEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDDAPYIWVGFPGK--P 385
Query: 333 DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVED 370
            ++V   +  R  +V  PG   G    G +R S  G  E+
Sbjct: 386 SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSREN 425

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 116/301 (38%), Gaps = 29/301 (9%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA     +I    
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---CDISRLQ 136
Query: 110 CDAGDSVVMFA-----PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADWLEKTLET 161
              G +V +       P Y +S +    TG  +  V   G        P+  +    L T
Sbjct: 137 VXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPD-LST 195
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE- 220
                ++   +P NP+G       L ++ +  K  GS +V D+ Y  +  D       E 
Sbjct: 196 VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEI 255
Query: 221 ---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC-----AS 269
               +      SFSK  G  G R+G+   P ++   +GF    +    N  IC     AS
Sbjct: 256 PGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIICTCFNGAS 312
Query: 270 IISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328
            ISQ  AL  L   G E   + +     N  II +  + LG   V GG+ A Y+W   P 
Sbjct: 313 NISQAGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPYVWVHFPN 371
Query: 329 K 329
           +
Sbjct: 372 Q 372

>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131) From Thermotoga Maritima Msb8 At 1.82 A Resolution Length = 425

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 148/355 (41%), Gaps = 33/355 (9%)
Query: 22  IQELVRGA--KNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPS--ISKYGADEGLPELRD 75
           I+E+++ A  K+A+S   GV   +  P K   E  KE++        +Y   EG P L+ 
Sbjct: 33  IREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ 92
Query: 76  ALVKKLNQE---NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
            ++K L +      L + +++ T G+ QA   I     D     V+  P Y  +  +F+ 
Sbjct: 93  QILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQ 152
Query: 133 TGVTHILVGPCSS-----KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
             + + +V P          L       +K  + K    +  V N  NP+G        K
Sbjct: 153 Y-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 211
Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGY 243
            + ++ +    ++V D+ Y    Y+G     +      + VV L +FSK     G R+G 
Sbjct: 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGX 270
Query: 244 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREII 301
           +A   E   F  ++++ + +  +C+  I+  LA   L+     E +   ++   R R + 
Sbjct: 271 VAGSKE---FIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVX 327
Query: 302 REALSPL-----GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
             AL        G   VK  EG +++W  LPE   D +E   + A R  V  +PG
Sbjct: 328 LNALEEYFSDIPGVKWVK-SEGGLFIWLTLPE-GFDTWEXFEY-AKRKKVFYVPG 379

>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima (Apo-Form) Length = 335

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    I+  +    D  V F P Y + Y  F        L  P +  
Sbjct: 74  LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E          +V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 129 LRIPEVNVGEG--------DVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
             F  +       + +++  + +FSKA+ +   RVGY+      E F     +V+  +P 
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
             S +SQ  A  +L    E   ER K +V  RE ++ AL  +G
Sbjct: 232 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 273

>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase (ec 2.6.1.9) (imidazole Acetol-phosphate Transferase) (tm1040) From Thermotoga Maritima At 2.40 A Resolution Length = 347

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    I+  +    D  V F P Y + Y  F        L  P +  
Sbjct: 86  LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 140
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E  +        V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 141 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 188
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
             F  +       + +++  + +FSKA+ +   RVGY+      E F     +V+  +P 
Sbjct: 189 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 243
Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
             S +SQ  A  +L    E   ER K +V  RE ++ AL  +G
Sbjct: 244 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 285

>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima Length = 335

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    I+       D  V F P Y + Y  F        L  P +  
Sbjct: 74  LSKNNVSVGNGADE----IIYVXXLXFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E  +        V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 129 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
             F  +       + +++  + +FSKA+ +   RVGY+      E F     +V+  +P 
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
             S +SQ  A  +L    E   ER K +V  RE  + AL   G
Sbjct: 232 NVSYVSQXFAKVALDHR-EIFEERTKFIVEERERXKSALREXG 273

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 29/319 (9%)
Query: 72  ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
           ELRD L   + ++    + + ++    G+N+    ++      G + + F P Y  S   
Sbjct: 70  ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 127
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
               G     +          D D   + +  K  P +V V  P NP+G       L  +
Sbjct: 128 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 183
Query: 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGY-IAY 246
             +   A   ++VD  Y  F         +E     +V   + SKA+   G R+GY +A 
Sbjct: 184 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 243
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
           P+ ++  A  L++    +P   S +SQ  A+ +L+   + +   V+ L   R  +   L 
Sbjct: 244 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 296
Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366
            LG  AV   E     +    ++H        W A     V+I     G  GHLR + G 
Sbjct: 297 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 347
Query: 367 LVEDDC--KAAADRLRRGL 383
             E+D    AAA+ ++  L
Sbjct: 348 PEENDAFLDAAAEIIKLNL 366

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 29/319 (9%)
Query: 72  ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
           ELRD L   + ++    + + ++    G+N+    ++      G + + F P Y  S   
Sbjct: 73  ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
               G     +          D D   + +  K  P +V V  P NP+G       L  +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGY-IAY 246
             +   A   ++VD  Y  F         +E     +V   + SKA+   G R+GY +A 
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 246
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
           P+ ++  A  L++    +P   S +SQ  A+ +L+   + +   V+ L   R  +   L 
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366
            LG  AV   E     +    ++H        W A     V+I     G  GHLR + G 
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 367 LVEDDC--KAAADRLRRGL 383
             E+D    AAA+ ++  L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369

>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Np_281508.1) From Campylobacter Jejuni At 2.01 A Resolution Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 50/249 (20%)
Query: 28  GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87
           G K  + LA     +  P  A+E +++   + + +    D+   EL+  L +K   +N+ 
Sbjct: 28  GVKEVIKLASNENPFGTPPKAIECLRQ---NANKAHLYPDDSXIELKSTLAQKYKVQNE- 83
Query: 88  YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FNSYMSFQMTGVT----HILVGP 142
              ++++ AG++Q               V+ FA +   NS  +F   GVT     I    
Sbjct: 84  ---NIIIGAGSDQ---------------VIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 143 CSSK-----TLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI----PERLLKRISDL 192
           C +K     ++  + D  +K  ET K   KL+ +  P NP G  +        +K +++ 
Sbjct: 126 CGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNED 185
Query: 193 CKAAGSWLVVDNTYEYF--MYDGRKH---CCV--EGDHVVNLFSFSKAYGMMGWRVGY-I 244
           C      +V+D  Y  F    D +KH   C +  E D+V+ L +FS  YG+ G R+GY I
Sbjct: 186 C-----LVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGI 240
Query: 245 AYPSEVEGF 253
           A  + +  F
Sbjct: 241 ANANIISAF 249

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 24/238 (10%)
Query: 76  ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
           A+++   Q   +    V+V+ GA++    ++   C+ G   +++ P  +  Y +S +  G
Sbjct: 62  AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           V          +T+    +W   L+   +     K+V V +P NP+G  I  +  + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
           L +   + +V D  Y E+           E  H+  L + SKA+ + G R G+     EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 251 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
                 L+KV    P+    A I +Q L+      G   + ERV  ++  RE +  AL
Sbjct: 233 INL---LMKVIAPYPLSTPVADIAAQALS----PQGIVAMRERVAQIIAEREYLIAAL 283

>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase Length = 546

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
           +PD++ L+K     P  K+   VNP NP    + +R L+R+ ++       L++  D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245
             F  D +    +  ++ + ++SFSK +G  GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328

>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase Length = 546

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
           +PD++ L+K     P  K+   VNP NP    + +R L+R+ ++       L++  D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245
             F  D +    +  ++ + ++SFSK +G  GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328

>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Yp_050345.1) From Erwinia Carotovora Atroseptica Scri1043 At 1.80 A Resolution Length = 354

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210
           D + L+  +     P +V +VNP NP+GT  P  +++      K A +  +VD  Y  F+
Sbjct: 128 DIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWI-ASKPANTXFIVDEAYAEFV 186
Query: 211 YDGRKHCCVE-----GDHVVNLFSFSKAYGMMGWRVGY-IAYPS 248
            D R            ++++ L +FSK +   G RVGY +A+P+
Sbjct: 187 NDPRFRSISPXITQGAENIILLKTFSKIHAXAGXRVGYAVAHPT 230

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 76  ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
           A+++   Q   +    V+V+ GA++    ++   C+ G   +++ P  +  Y +S +  G
Sbjct: 62  AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           V          +T+    +W   L+   +     K+V V +P NP+G  I  +  + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
           L +   + +V D  Y E+           E  H+  L + SKA+ + G R G+     EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 251 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
                 L KV    P+    A I +Q L+      G     ERV  ++  RE +  AL
Sbjct: 233 INL---LXKVIAPYPLSTPVADIAAQALS----PQGIVAXRERVAQIIAEREYLIAAL 283

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 29/319 (9%)
Query: 72  ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
           ELRD L   + ++    + + ++    G+N+    ++      G + + F P Y  S   
Sbjct: 73  ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
               G     +          D D   + +  K  P +V V  P NP+G       L  +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGY-IAY 246
             +   A   ++VD  Y  F         +E     +V   + S A+   G R+GY +A 
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVAN 246
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
           P+ ++  A  L++    +P   S +SQ  A+ +L+   + +   V+ L   R  +   L 
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366
            LG  AV   E     +    ++H        W A     V+I     G  GHLR + G 
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 367 LVEDDC--KAAADRLRRGL 383
             E+D    AAA+ ++  L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 134/348 (38%), Gaps = 33/348 (9%)
Query: 49  MEKVKELVWDPSISKYGADEGLPELRDA--------LVKKLNQENKLYKSSVMVTAGANQ 100
           ++K+KE +     + Y    G PE R+A         V K   ++ + K +V++ +G + 
Sbjct: 56  IKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSH 115
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
             +  +  +CDAGD  ++  P + +     +  G+               D D + +  +
Sbjct: 116 GILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175
Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE 220
            K   KL+ V NP NP G+    + ++ I  L +     L  D  Y   ++ G+      
Sbjct: 176 DK--TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATF 233
Query: 221 GDHV--------VNLFSFSKAYGMMGWRVGYIAY-------PSEVEGFATQLLKVQDNIP 265
                       V L   +    + GWR+G++ Y       PS +EG     + V     
Sbjct: 234 TSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCT 293
Query: 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
           +  + + + L    L T  E + + V  +  +   +   +      A     GA+YL +R
Sbjct: 294 VVQAALGEAL----LNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR 349
Query: 326 LP-EKHLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE 369
           +  EK+ D   D E    L     V V+PG      G  R++    VE
Sbjct: 350 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVE 397

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 10/260 (3%)
Query: 84  ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
           E  L    V++T+G +QA    +  L + G ++++  P +       +  G+   L    
Sbjct: 90  EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLL 149
Query: 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
             K+   D   LE  ++ K T  LV V NP NP G+   +R L++I  + +     ++ D
Sbjct: 150 PEKSWEIDLKQLESLIDEK-TACLV-VNNPSNPCGSVFSKRHLQKILAVAERQCVPILAD 207
Query: 204 NTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--- 256
             Y   ++   K+           +++    +  + + GWR+G+I      + F  +   
Sbjct: 208 EIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRD 267
Query: 257 -LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315
            L+K+   I    +I+   L     +T  E+  + +  L  N ++   ALS +       
Sbjct: 268 GLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVR 327
Query: 316 GEGAIYLWARLPEKHLDDFE 335
             GA+YL   +  +H  +FE
Sbjct: 328 PSGAMYLMVGIEMEHFPEFE 347

>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase Length = 544

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164
           L  AGD V +  P  F  Y+         +   P  +    PD  W     E      P 
Sbjct: 189 LLKAGDKVAIGMPV-FTPYIEIPELAQYDLKEVPIHAD---PDNGWQYSDAELDKLKDPD 244
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTYEYFMYDGRKHCCVEGD 222
            K+   VNP NP    + +R L R+  +       L++  D+ Y  F  + +    V   
Sbjct: 245 VKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYGTFADEFQSLFSVCPR 304
Query: 223 HVVNLFSFSKAYGMMGWRVGYIA 245
           + + ++SFSK +G  GWR+G IA
Sbjct: 305 NTLLVYSFSKYFGATGWRLGVIA 327

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 10/260 (3%)
Query: 84  ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
           E  L    V++T+G +QA    +  L + G ++++  P +       +  G+   L    
Sbjct: 113 EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLL 172
Query: 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
             K+   D   LE  ++ K    +V+  NP NP G+   +R L++I  +       ++ D
Sbjct: 173 PEKSWEIDLKQLEYLIDEKTACLIVN--NPSNPCGSVFSKRHLQKILAVAARQCVPILAD 230
Query: 204 NTYEYFMYDGRKH---CCVEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--- 256
             Y   ++   K+     +  D  +++    +K + + GWR+G+I      + F  +   
Sbjct: 231 EIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRD 290
Query: 257 -LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315
            L+K+   I    +I+   L     +T  E+    +  L  N ++   AL+ +       
Sbjct: 291 GLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVR 350
Query: 316 GEGAIYLWARLPEKHLDDFE 335
             GA+YL   +  +H  +FE
Sbjct: 351 PSGAMYLMVGIEMEHFPEFE 370

>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans Length = 421

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 19/282 (6%)
Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG---PCSS 145
           K  ++   G   A    +    + GD+V++ +P Y+    + ++    H LV       +
Sbjct: 119 KEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND--HRLVENSLQIIN 176
Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
                D + LEK +      K+  + +P NP G       L +I++LCK  G  LV D  
Sbjct: 177 GRFEIDFEQLEKDI-IDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEI 235
Query: 206 YEYFMYDGRKHCCVEG------DHVVNLFSFSKAYGMMGWRVGY--IAYPSEVEGFA-TQ 256
           ++     G  H  +        D  + L S +K + + G +  +  I   S    F   Q
Sbjct: 236 HQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQ 295
Query: 257 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 316
           L   Q  +P    I +Q     + Q G  W+ E    +  N +++ + L    +  V   
Sbjct: 296 LANNQHEVPTVGMIATQA----AFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP 351
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG 358
           EG   +W       +   ++   L +   VV+  G   G  G
Sbjct: 352 EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEG 393

>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme Length = 533

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
           +PD++ L+K  +  P  K+   VNP NP    + ER L+R+  +       L++  D+ Y
Sbjct: 233 YPDSE-LDKLKD--PAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVY 289
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245
             F    +    +   + + ++SFSK +G  GWR+G +A
Sbjct: 290 GTFADGFQSLFAICPANTLLVYSFSKYFGATGWRLGVVA 328

>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase (Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60 A Resolution Length = 337

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVN 226
           V + NP NP+G  +    L    D  +     L++D TY +Y  +  R      G++ + 
Sbjct: 139 VVLANPSNPTGQALSAGEL----DQLRQRAGKLLIDETYVDYSSF--RARGLAYGENELV 192
Query: 227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQTGPE 285
             SFSK+YG+ G R+G +  PSE+      +   +     C    +  H    +L     
Sbjct: 193 FRSFSKSYGLAGLRLGALFGPSEL------IAAXKRKQWFCNVGTLDLHALEAALDNDRA 246
Query: 286 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345
                 K L + R +  +AL  LG          + +     E+ L      R+L  R G
Sbjct: 247 REAHIAKTLAQRRRVA-DALRGLGYRVASSEANFVLVENAAGERTL------RFLRER-G 298
Query: 346 VVVIPGGACGCRGHLRISFGGLVEDD 371
           + V   G  G   H+RIS G   ++D
Sbjct: 299 IQVKDAGQFGLHHHIRISIGREEDND 324

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 20/214 (9%)
Query: 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---- 221
           KL  + NP NP G    +  LK++ D+C      ++ D  +   +    KH  +      
Sbjct: 166 KLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKE 225
Query: 222 --DHVVNLFSFSKAYGMMGWRVGYIAYPSE-----VEGFATQLLKVQDNIPICASIISQH 274
              + +   + +K + + G +  Y+  P E     ++   T++   ++N   C S+++  
Sbjct: 226 FEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNN---CFSLVATE 282
Query: 275 LALYSLQTGPEWVTERVKDLVRNREI-IREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333
               S   G  W+   ++ L  N +  I+     + +  V+  EG   LW       L D
Sbjct: 283 A---SYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSD 339
Query: 334 FEVVRWLAHRHGVVVIPGGACGC--RGHLRISFG 365
            E+   L  +  V +  G + G    G+ RI+  
Sbjct: 340 EELESILVQKGKVALNQGNSFGIGGSGYQRINLA 373

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 29/207 (14%)
Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS 145
           +L +  ++ TAG ++    +   L D   + V   P +     +  + G   +   P   
Sbjct: 81  QLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNALIEGA-EVREIPLLQ 139
Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP----ERLLKRI-SDLCKAAGSWL 200
              H D +     ++ K T  +V + NP NP+G YI     +  L R+ SD+       +
Sbjct: 140 DGEH-DLEGXLNAIDEKTT--IVWICNPNNPTGNYIELADIQAFLDRVPSDVL------V 190
Query: 201 VVDNTY-EYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257
           V+D  Y EY      KH        +++   +FSK YG+   RVGY        G A + 
Sbjct: 191 VLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGY--------GIADKE 242
Query: 258 LKVQDNI---PICASIISQHLALYSLQ 281
           +  Q NI   P   + I Q LA+ +++
Sbjct: 243 IIRQLNIVRPPFNTTSIGQKLAIEAIK 269

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 164 TPKL--VSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTYEYFM--YDGRKHCC 218
           TP L  + +  P NP+G  +PER LL+ I+D CK+    L++D  +  F+    G     
Sbjct: 144 TPDLDCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL 202
Query: 219 VEGDHVVNLFSFSKAYGMMGWRVGYI 244
            +  H+  L S +K Y + G R+GY+
Sbjct: 203 KDNPHIWVLRSLTKFYAIPGLRLGYL 228

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	400
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	4e-66
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	2e-64
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	2e-63
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	5e-60
3nra_A	407	Aspartate aminotransferase; structural genomics, j	1e-59
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	9e-58
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	3e-57
3ele_A	398	Amino transferase; RER070207001803, structural gen	6e-57
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-56
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	5e-56
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	8e-56
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	9e-56
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	1e-55
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	4e-55
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	5e-55
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-54
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	1e-54
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	2e-54
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	6e-54
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	6e-54
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	2e-53
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	5e-53
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	1e-52
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	2e-52
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	2e-52
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	3e-51
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	3e-51
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	6e-51
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	3e-50
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	2e-49
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	4e-48
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	4e-46
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	7e-42
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	2e-40
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	3e-40
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	4e-39
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	1e-38
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	4e-37
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	7e-37
1vp4_A	425	Aminotransferase, putative; structural genomics, j	9e-36
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	1e-35
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	2e-35
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	5e-35
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	7e-34
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	1e-33
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	6e-33
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	5e-30
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	4e-28
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	7e-28
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	7e-27
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	2e-26
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	2e-26
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	2e-25
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	7e-25
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	9e-25
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	1e-23
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	4e-23
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	6e-23
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	9e-23
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	2e-19
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	3e-13
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	5e-12
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	2e-11
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	3e-11
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	1e-10
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	2e-10
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	3e-10
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	4e-09
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	4e-06
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	3e-05
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	5e-05
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	7e-05
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	8e-05
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	1e-04
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	2e-04
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	5e-04
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	9e-04

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  214 bits (547), Expect = 4e-66
 Identities = 88/383 (22%), Positives = 157/383 (40%), Gaps = 29/383 (7%)

Query: 16  MPIMVQIQELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVWDPSISKYGADEGLP 71
           M +M   +      +  + +  G    QP    P+ A+E + + +   ++  Y    GLP
Sbjct: 17  MDVMEAARRAEEAGRRIIHMEVG----QPGTGAPRGAVEALAKSLETDAL-GYTVALGLP 71

Query: 72  ELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
            LR  + +   +   +      V++T G++  F+     L D+GD V + AP Y  SY  
Sbjct: 72  ALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYP-SYRQ 130

Query: 130 F-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
             +  G+  + + P + +  L P                 + V +P NP+GT +    + 
Sbjct: 131 ILRALGLVPVDL-PTAPENRLQPVPADFAG-----LDLAGLMVASPANPTGTMLDHAAMG 184

Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAY 246
            + +  +A G+  + D  Y    Y+ +    +E  D    + SFSK + M GWRVG++  
Sbjct: 185 ALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVV 244

Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
           P +       + ++  N+ ICA   SQ  AL +L      +   +     NR+++ E L 
Sbjct: 245 PEDQ---VRVVERIAQNMFICAPHASQVAALAAL-DCDAELQANLDVYKANRKLMLERLP 300

Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRIS 363
             G   +   +GA Y++A + +   D       +  + GV V PG         G LR S
Sbjct: 301 KAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFS 360

Query: 364 FGGLVEDDCKAAADRLRRGLEEL 386
           +      D +   DRL   ++  
Sbjct: 361 YARATA-DIEEGLDRLEAFMQAR 382

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  210 bits (538), Expect = 2e-64
 Identities = 89/407 (21%), Positives = 163/407 (40%), Gaps = 41/407 (10%)

Query: 6   KLAKRALE-TEMPI--MVQI-QELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVW 57
             + R L   E PI  +V   +   +       L  G    QP    P++  E++ E   
Sbjct: 15  VFSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIG----QPDLKTPEVFFERIYEN-- 68

Query: 58  DPSISKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDS 115
            P +  Y    G+ ELR+A      +  ++  K   V+VT G ++A +     + + GD 
Sbjct: 69  KPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDE 128

Query: 116 VVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174
           +++  P+Y  +Y +F ++ GV  I V     +        LE  +  + T K + + NP 
Sbjct: 129 ILVLEPFYA-NYNAFAKIAGVKLIPV-TRRMEEGFAIPQNLESFI-NERT-KGIVLSNPC 184

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDHVVNLFSFS 231
           NP+G    +  ++ + ++ +  G +L+VD  Y   ++ G +      +E D VV + S S
Sbjct: 185 NPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVS 243

Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 291
           K +   G RVG +   +E     +  +K+     +   ++ Q  ++  L     +     
Sbjct: 244 KKFSACGARVGCLITRNEE--LISHAMKLAQGR-LAPPLLEQIGSVGLLNLDDSFFDFVR 300

Query: 292 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL-----AHRHGV 346
           +      E + + L   G        GA Y+ A LP +  ++F   RW+           
Sbjct: 301 ETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEF--ARWMLTDFNMDGETT 358

Query: 347 VVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
           +V P           +  +RI+   L +D    A D L  GL+    
Sbjct: 359 MVAPLRGFYLTPGLGKKEIRIAC-VLEKDLLSRAIDVLMEGLKMFCS 404

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  207 bits (528), Expect = 2e-63
 Identities = 66/329 (20%), Positives = 129/329 (39%), Gaps = 14/329 (4%)

Query: 63  KYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
            YG  EG P  + ++ +         K   ++ T GA  A + ++ +L + GD V+   P
Sbjct: 58  NYGWIEGSPAFKKSVSQLYTG----VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113

Query: 122 YYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
            Y        +  G    L          PD + L + +  +PT K++ + N  NP+G  
Sbjct: 114 TYQ-QLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI--RPTTKMICINNANNPTGAV 170

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 240
           +    L+ + ++    G++++ D  Y  F            D  + + S SK Y + G R
Sbjct: 171 MDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIR 230

Query: 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300
           +G++A   +V      L   +D   ICA +    +A  +L    E +      L  N  I
Sbjct: 231 IGWVAANHQV---TDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAI 287

Query: 301 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 360
           + + +      +          + ++    +   +    L   HGV+++PG      G++
Sbjct: 288 LDQWIEEEPLVSYIRPAVVSTSFVKIA-VDMPMEDFCLQLLQEHGVLLVPGNRFERDGYV 346

Query: 361 RISFGGLVEDDCKAAADRLRRGLEELVKD 389
           R+ F    ++      ++L + L    K+
Sbjct: 347 RLGF-ACEQETLIKGLEKLSQFLRRFDKE 374

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  198 bits (506), Expect = 5e-60
 Identities = 88/376 (23%), Positives = 145/376 (38%), Gaps = 44/376 (11%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQEN 85
             A++L+QG   +  P+   E++        +++    Y    G+  LR+A+ +K  +  
Sbjct: 30  HQAINLSQGFPDFDGPRYLQERLAH-----HVAQGANQYAPMTGVQALREAIAQKTERLY 84

Query: 86  KLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVG 141
                  S + VTAGA +A    +  L   GD V+ F P Y +SY  +  ++G     + 
Sbjct: 85  GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSY-DSYAPAIALSGGIVKRM- 142

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
                    D       L      +LV +  P NPS T   +     +         +++
Sbjct: 143 ALQPPHFRVDWQEFAALL--SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVI 200

Query: 202 VDNTYEYFMYDGRKHCCV---EG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256
            D  YE+  +  + H  V       +  V + SF K Y M GW+VGY   P+ +   + +
Sbjct: 201 SDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPI---SAE 257

Query: 257 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 316
           + KV   +    +  +Q      L+  PE          + R+I+  AL+      +   
Sbjct: 258 IRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILP-C 316

Query: 317 EGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDD 371
           EG  +L         LDD E  +WL   HGV  IP             +R+ F       
Sbjct: 317 EGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF------- 369

Query: 372 CK------AAADRLRR 381
            K      AAA+RLR+
Sbjct: 370 AKKESTLLAAAERLRQ 385

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  198 bits (505), Expect = 1e-59
 Identities = 68/345 (19%), Positives = 120/345 (34%), Gaps = 33/345 (9%)

Query: 63  KYGADEGLPELRDALVKKLNQENKL-YKSS--VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
            Y    G   +RD L  +L         +   +++T G   A    V      GD V + 
Sbjct: 73  AYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIV 132

Query: 120 APYYFNSYMSF-QMTGVTHILVGPCSSKTL-----HPDADWLEKTLETKPTP--KLVSVV 171
            P YF +     +      + V      +        D   LE+          ++    
Sbjct: 133 QPDYF-ANRKLVEFFEGEMVPV-QLDYVSADETRAGLDLTGLEEAF----KAGARVFLFS 186

Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDH----- 223
           NP NP+G       + +I+ L    G+ ++ D  Y    Y G  +               
Sbjct: 187 NPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVV 246

Query: 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 283
            +     SK   + G+R+G       +     ++ K+Q  + + A+  SQ +        
Sbjct: 247 TIM--GPSKTESLSGYRLGVAFGSRAI---IARMEKLQAIVSLRAAGYSQAVLRGWFDEA 301

Query: 284 PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343
           P W+ +R+      R+ +   L        +  +   YL+ RLP+  +   E V+ L  +
Sbjct: 302 PGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQ 361

Query: 344 HGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEEL 386
            GVVV PG          +R++F     +   AAA R+   +E  
Sbjct: 362 AGVVVTPGTEFSPHTADSVRLNF-SQDHEAAVAAARRIVTLVERY 405

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  194 bits (494), Expect = 9e-58
 Identities = 79/408 (19%), Positives = 151/408 (37%), Gaps = 56/408 (13%)

Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
                 +  ++L QG   + PP+ A+++ ++ +  P +++Y    G P L ++L+K  + 
Sbjct: 51  NSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSP 110

Query: 84  ENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV 140
                 K+  V VT GAN+  ++ ++ L +AGD V++F P++ + Y+   ++ G   + V
Sbjct: 111 IYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFF-DQYIPNIELCGGKVVYV 169

Query: 141 ----GPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDL 192
                    +      +W    +  E   T   K V +  P NP G       L  + ++
Sbjct: 170 PINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNI 229

Query: 193 CKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGY-IAY 246
           C      ++ D  YE+  +                  + + S  K++   GWR+G+ ++ 
Sbjct: 230 CVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL 289

Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREA 304
            +E+    +   K    I   +    Q     S+    +  +  +  ++ +   +I    
Sbjct: 290 NAEL---LSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSI 346

Query: 305 LSPLG------EGA-------VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
              LG      EG         K      Y +         DF +  WL +  GVV IP 
Sbjct: 347 FDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPP 406

Query: 352 GA-------CGCRGHLRISFGGLVEDDCK------AAADRLRRGLEEL 386
                          LR +        CK       A +RL+   + L
Sbjct: 407 TEFYIKEHEKAAENLLRFAV-------CKDDAYLENAVERLKLLKDYL 447

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  191 bits (487), Expect = 3e-57
 Identities = 107/406 (26%), Positives = 193/406 (47%), Gaps = 46/406 (11%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQP----P-------KMAMEKVKE 54
            L+ R        + ++ ++  G K+ +SL  G    +P    P       K A++K   
Sbjct: 2   ALSDRLELVSASEIRKLFDIAAGMKDVISLGIG----EPDFDTPQHIKEYAKEALDKGL- 56

Query: 55  LVWDPSISKYGADEGLPELRDALVKKLNQENKL-YK--SSVMVTAGANQAFVNIVLTLCD 111
                  + YG + GL ELR+A+ +KL ++N +     + +MV  GANQAF+  +     
Sbjct: 57  -------THYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK 109

Query: 112 AGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVS 169
            G+ V++  P +  SY     + G   + V P   +     + D L+K + T  T + + 
Sbjct: 110 DGEEVLIPTPAFV-SYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYV-TDKT-RALI 165

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEG--DHV 224
           + +P NP+G  + ++ L+ I+D        ++ D  YE+F+YD  +H     ++G  +  
Sbjct: 166 INSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERT 225

Query: 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP 284
           + +  FSK + M GWR+G++A PS +     +++K Q     C     Q+ A  +L+   
Sbjct: 226 ITVNGFSKTFAMTGWRLGFVAAPSWI---IERMVKFQMYNATCPVTFIQYAAAKALKDER 282

Query: 285 EW--VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 342
            W  V E  K+  R R+++ + L+ +G   VK  +GA Y++ R+ +  L   +    +  
Sbjct: 283 SWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVK-PKGAFYIFPRIRDTGLTSKKFSELMLK 341

Query: 343 RHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
              V V+PG A G    G++RIS+     +  + A DR+ R L+E 
Sbjct: 342 EARVAVVPGSAFGKAGEGYVRISY-ATAYEKLEEAMDRMERVLKER 386

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  190 bits (486), Expect = 6e-57
 Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 41/388 (10%)

Query: 24  ELVRGAKNAVSLAQGVVYWQP----P---KMAMEKVKELVWDPSISKYGADEGLPELRDA 76
             + G +N    + G     P    P      ++++       ++  Y + +G  E R A
Sbjct: 29  AAIVGKENVYDFSIG----NPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAA 84

Query: 77  LVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSF-QM 132
           + + LN  +   + +  + +T GA  +       L  DA D  +  APY F  Y  F   
Sbjct: 85  IAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPY-FPEYKVFVNA 143

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
            G   + V P  ++    D D LE+ +    T + V + +P NPSGT   E  +K++SDL
Sbjct: 144 AGARLVEV-PADTEHFQIDFDALEERI-NAHT-RGVIINSPNNPSGTVYSEETIKKLSDL 200

Query: 193 CKAAGS------WLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYI 244
            +          +++ D  Y   +YDG K   V    D+ +  +S+SK+  + G R+GY+
Sbjct: 201 LEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYV 260

Query: 245 AYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300
             P EV      +A      +    +CA  + Q + +          T  +     NR++
Sbjct: 261 LVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG-----ATGDINAYKENRDL 315

Query: 301 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 360
           + E L+ +G    K  +GA Y++ +  E   D             V+++     GC G +
Sbjct: 316 LYEGLTRIGYHCFK-PDGAFYMFVKALE--DDSNAFCEKAK-EEDVLIVAADGFGCPGWV 371

Query: 361 RISFGGLVEDDCKAAADRLRRGLEELVK 388
           RIS+  +  +  K +     +  ++  K
Sbjct: 372 RISY-CVDREMIKHSMPAFEKIYKKYNK 398

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  189 bits (483), Expect = 2e-56
 Identities = 88/397 (22%), Positives = 147/397 (37%), Gaps = 65/397 (16%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQEN 85
             AV+L QG      P     K+ +   D +I+     Y    G   LR A+  +  +  
Sbjct: 25  IGAVNLGQGFPDEDGP----PKMLQAAQD-AIAGGVNQYPPGPGSAPLRRAIAAQRRRHF 79

Query: 86  KLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVG 141
            +    ++ V+VT GA +A    VL L + G  V++  P+Y +SY     M G   + V 
Sbjct: 80  GVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFY-DSYSPVVAMAGAHRVTV- 137

Query: 142 PCSSKTLHPDA-----DWLEKTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCK 194
                 L PD      D     L    TP  + + + +P NP+G  +    L  I+++  
Sbjct: 138 -----PLVPDGRGFALDADA--LRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAV 190

Query: 195 AAGSWLVVDNTYEYFMYDGRKHCCV---EG--DHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
           AA   ++ D  YE+ ++D  +H  +   +G  +  + + S +K +   GW++G+   P+E
Sbjct: 191 AANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAE 250

Query: 250 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
           +      +   +  +        Q     +L T   WV      L   R+ +   L+ +G
Sbjct: 251 L---IAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIG 307

Query: 310 EGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGH--------- 359
                   G  +L A      + D  E    L  + GV  IP  A               
Sbjct: 308 FAVHD-SYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADV 366

Query: 360 ----LRISFGGLVEDDCK------AAADRLRRGLEEL 386
               +R +F       CK       A  RL    E  
Sbjct: 367 WNHLVRFTF-------CKRDDTLDEAIRRLSVLAERP 396

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  188 bits (479), Expect = 5e-56
 Identities = 80/372 (21%), Positives = 140/372 (37%), Gaps = 32/372 (8%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQEN 85
              ++L+ G           E     +   S       YG D GLP LR  L +      
Sbjct: 33  HTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF-YRG 91

Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCS 144
            +    + ++ GA      + L+      +V +  P Y  +Y+   ++TG   I+  PC 
Sbjct: 92  FVDAKEIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSY-PAYLDIARLTGAKEIIALPCL 149

Query: 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204
                 +  +            ++ + +P NP+GT + +  L+ I          ++ D 
Sbjct: 150 -----QENAFFP-EFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDA 203

Query: 205 TYEYFMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG-----FA 254
            Y  F+ D         +       + + SFSK  G  G R+G+   P E+         
Sbjct: 204 AYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVI 263

Query: 255 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314
               +        ASI +Q   +  L   P+   E +     N +++R+AL   G   V 
Sbjct: 264 QDWERFLSTTFNGASIPAQEAGVAGLSILPQL--EAIHYYRENSDLLRKALLATGF-EVF 320

Query: 315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDD 371
           GGE A YLW +  + ++ D ++  +    + + + PG   G  G  G +R S  G   +D
Sbjct: 321 GGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSG-SGFVRFSSLG-KRED 378

Query: 372 CKAAADRLRRGL 383
             AA +RL+   
Sbjct: 379 ILAACERLQMAP 390

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  188 bits (480), Expect = 8e-56
 Identities = 75/361 (20%), Positives = 135/361 (37%), Gaps = 40/361 (11%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKL---YKSS-VMVTAGANQAFVNIVLTLCDAGD 114
            +I+ +    GLPE R A+ K + +       +    V++  GA  A   I+  L D GD
Sbjct: 74  KAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGD 133

Query: 115 SVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLE----TKPTPKL 167
           + ++ +PYY  ++       TGV  I +  C S       +  +++  E    +    K 
Sbjct: 134 AFLVPSPYY-PAFNRDLRWRTGVQLIPI-HCESSNNFKITSKAVKEAYENAQKSNIKVKG 191

Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-------- 219
           + + NP NP GT + +  LK +          LV D  Y   ++D  +   +        
Sbjct: 192 LILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQE 251

Query: 220 ------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQ 273
                 +  H+V   S SK  G+ G+RVG I   S  +       K+     +       
Sbjct: 252 MTYCNKDLVHIVY--SLSKDMGLPGFRVGIIY--SFNDDVVNCARKMSSFGLVSTQTQYF 307

Query: 274 HLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK--- 329
             A+ S +   +  + E    L +  +     L  +G   +K     ++ W  L      
Sbjct: 308 LAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLK-NNAGLFCWMDLRPLLRE 366

Query: 330 --HLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEE 385
                +  + R + +   + V PG +  C+  G  R+ F  + +     A  R+RR +  
Sbjct: 367 STFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV 426

Query: 386 L 386
            
Sbjct: 427 E 427

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  188 bits (479), Expect = 9e-56
 Identities = 86/390 (22%), Positives = 160/390 (41%), Gaps = 32/390 (8%)

Query: 22  IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81
                R  ++ + L+ G      P   +EK+  +        Y    G+P LR A+    
Sbjct: 29  KMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWY 88

Query: 82  NQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
                +    +S  +VT G+ +   +++L   D GD++++  P Y        + G    
Sbjct: 89  RDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVR 148

Query: 139 LVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAA 196
            V P         + +   +  E+ P P+++ ++  P NP+   +     +R+  L K  
Sbjct: 149 SV-PLVPGIDFFNELERAIR--ESIPKPRMM-ILGFPSNPTAQCVELDFFERVVALAKQY 204

Query: 197 GSWLVVDNTYEYFMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251
              +V D  Y   +YDG K      V G  D  V  F+ SK+Y M GWR+G++    E+ 
Sbjct: 205 DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL- 263

Query: 252 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311
              + L +++           Q  A+ +L+   + V +  +   + R+++ + L   G  
Sbjct: 264 --VSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-W 320

Query: 312 AVKGGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGG 366
            V+  + ++Y+WA++PE   HL   E  + L     V V PG   G  G   H+R +   
Sbjct: 321 MVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYG-DDHVRFA--- 376

Query: 367 LV--EDDCKAAADRLRRGLEELVKDGMVQE 394
           L+   D  + A   ++        DG++  
Sbjct: 377 LIENRDRLRQAVRGIKAMFR---ADGLLSP 403

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  188 bits (479), Expect = 1e-55
 Identities = 81/377 (21%), Positives = 140/377 (37%), Gaps = 42/377 (11%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKL-YKSS-VMVTAGANQ 100
           P+ A  K         ++ +    GLP  + A+V  + +   NK+ +  + +++TAGA  
Sbjct: 63  PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 122

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKT-LHPDADWLEK 157
           A    +  L D G++V++  PYY   +       TGV  + +  C+S          LE+
Sbjct: 123 ANETFIFCLADPGEAVLIPTPYY-PGFDRDLKWRTGVEIVPI-HCTSSNGFQITETALEE 180

Query: 158 TLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
             +         K V V NP NP GT +    L  +    +  G  L+ D  Y    +  
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240

Query: 214 RKHCCV------------EGD----HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257
                V                   HVV   S SK  G+ G+RVG I   S  +      
Sbjct: 241 PSFISVMEVLKDRNCDENSEVWQRVHVVY--SLSKDLGLPGFRVGAIY--SNDDMVVAAA 296

Query: 258 LKVQDNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGG 316
            K+     + +       A+ S +   +  + E  K L + ++ +   L   G   +  G
Sbjct: 297 TKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLN-G 355

Query: 317 EGAIYLWARLPE-----KHLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVE 369
              ++ W  +           + E+ + + +   + + PG +C C   G  R+ F  L E
Sbjct: 356 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPE 415

Query: 370 DDCKAAADRLRRGLEEL 386
                A  RL+  + E 
Sbjct: 416 RTLDLAMQRLKAFVGEY 432

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  185 bits (472), Expect = 4e-55
 Identities = 96/398 (24%), Positives = 155/398 (38%), Gaps = 45/398 (11%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           +L  R    +  I  ++  L +    AV+L QG     PP   +E V+  +      +Y 
Sbjct: 2   RLHPRTEAAKESIFPRMSGLAQ-RLGAVNLGQGFPSNPPPPFLLEAVRRALGRQD--QYA 58

Query: 66  ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
              GLP LR+AL ++   E +    SV+VT+GA +A   ++ +L   GD VV+  P++ +
Sbjct: 59  PPAGLPALREALAEEFAVEPE----SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFF-D 113

Query: 126 SYMSF-QMTGVTHILVG-PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            Y+    + G    LV    + +    D   LEK L   P  + + +  P NP+G    E
Sbjct: 114 VYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL--TPRTRALLLNTPMNPTGLVFGE 171

Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRV 241
           R L+ I+ L +A   +L+ D  Y+   Y  R     E   +    + S  K     G+RV
Sbjct: 172 RELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRV 231

Query: 242 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNRE 299
           G+I  P E      +L  ++      A    Q     +L+      +     +   R R+
Sbjct: 232 GWIVGPKEF---MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRD 288

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG-----GAC 354
           ++   L  +G       EG  +L A LP            L     V +IP         
Sbjct: 289 LLAGGLRAMGLRVYV-PEGTYFLMAELPG------WDAFRLVEEARVALIPASAFYLEDP 341

Query: 355 GCRGHLRISFGGLVEDDCK------AAADRLRRGLEEL 386
             +   R +F       CK       A +RL R +   
Sbjct: 342 P-KDLFRFAF-------CKTEEELHLALERLGRVVNSP 371

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  185 bits (471), Expect = 5e-55
 Identities = 82/376 (21%), Positives = 153/376 (40%), Gaps = 29/376 (7%)

Query: 22  IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81
            ++        + L+ G     PP+  ++ + E + DP+   Y          +   +  
Sbjct: 17  KRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWY 76

Query: 82  NQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
                +    +   +   G+ +   +++L L +  D +++    Y + + + ++  +   
Sbjct: 77  EGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTF 136

Query: 139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAG 197
           L+ P     L  D   + +        K++ ++N P NP+G        +    L +  G
Sbjct: 137 LI-PLREDGL-ADLKAVPE--GVWREAKVL-LLNYPNNPTGAVADWGYFEEALGLARKHG 191

Query: 198 SWLVVDNTYEYFMYDGRKHC--CVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253
            WL+ DN Y   +Y+G       + G  + VV LFS SK+Y + G+R+G+     E    
Sbjct: 192 LWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEA--- 248

Query: 254 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 313
             +L +V+  I          + + +L+T  E V    +        + EAL  +    +
Sbjct: 249 LARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGVLS--L 306

Query: 314 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLV-- 368
                 +YLW RLPE  +DD E    L    GV + PG   G  G +G +RI+   LV  
Sbjct: 307 LPPRATMYLWGRLPE-GVDDLEFGLRL-VERGVALAPGRGFGPGG-KGFVRIA---LVRP 360

Query: 369 EDDCKAAADRLRRGLE 384
            ++   AA R+R  L+
Sbjct: 361 LEELLEAAKRIREALD 376

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  185 bits (472), Expect = 1e-54
 Identities = 67/367 (18%), Positives = 135/367 (36%), Gaps = 38/367 (10%)

Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQA 101
                  + +K+ +     + Y    G    R+ +    +      ++  V++T+G +QA
Sbjct: 71  PTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQA 130

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADW---LEK 157
               +  L + G ++++  P +   Y +  +  G+   L        L P+  W   L++
Sbjct: 131 IDLCLAVLANPGQNILVPRPGFS-LYKTLAESMGIEVKLY------NLLPEKSWEIDLKQ 183

Query: 158 TLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK 215
            LE         + V NP NP G+   +R L++I  +       ++ D  Y   ++   K
Sbjct: 184 -LEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCK 242

Query: 216 HCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL---LKVQDNIPICA 268
           +  +        +++    +K + + GWR+G+I      + F  ++   L       +  
Sbjct: 243 YEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGP 302

Query: 269 SIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEGAIYL 322
             I Q      L   P E+    +  L  N ++   AL+     A+ G       GA+YL
Sbjct: 303 CTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALA-----AIPGLRPVRPSGAMYL 357

Query: 323 WARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 378
              +  +H     +D E    L     V  +P         +R+    + E     A  R
Sbjct: 358 MVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI-TVPEVMMLEACSR 416

Query: 379 LRRGLEE 385
           ++   E+
Sbjct: 417 IQEFCEQ 423

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  184 bits (469), Expect = 1e-54
 Identities = 85/339 (25%), Positives = 159/339 (46%), Gaps = 24/339 (7%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           ++YG   G P LR+A+ +KL ++N L Y +  ++VT G  Q+  N++L + + GD V++ 
Sbjct: 61  TRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIP 120

Query: 120 APYYFNSY--MSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTP--KLVSVVNPG 174
           AP++  SY  M  ++   T +++ P + +T      + + + +    TP  KL+    P 
Sbjct: 121 APFWV-SYPEM-VKLAEGTPVIL-PTTVETQFKVSPEQIRQAI----TPKTKLLVFNTPS 173

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG------DHVVNLF 228
           NP+G       ++ I+ +   AG W++ D  YE  +YD  +H  +        +  V   
Sbjct: 174 NPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCS 233

Query: 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 288
            F+K Y M GWRVG++A P  +        K+Q +        +Q+ A+ + +   + V 
Sbjct: 234 GFAKTYAMTGWRVGFLAGPVPL---VKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQ 290

Query: 289 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348
           E +      R  + +AL+ +        +GA Y++  + +      +    L  +H V  
Sbjct: 291 EMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVAT 350

Query: 349 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387
           +PG A G    +R+S+     D  K   +RL + L  ++
Sbjct: 351 VPGAAFGADDCIRLSY-ATDLDTIKRGMERLEKFLHGIL 388

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  185 bits (471), Expect = 2e-54
 Identities = 87/429 (20%), Positives = 156/429 (36%), Gaps = 61/429 (14%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV--WD 58
           M +   L KR   +   + V+  +L       ++L QG   +  PK A+  +       D
Sbjct: 9   MHNKFDLPKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPD 67

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDS 115
           P  ++Y    G P L  AL K  +Q         + V+VT GA +A    +    D GD 
Sbjct: 68  PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDE 127

Query: 116 VVMFAPYYFNSYMSF-QMTGVTHILV--GPCSSKTLHPDADWL--EKTLETKPTP--KLV 168
           V++  P++ + Y    +  G     +   P  +      ADW+     LE       K++
Sbjct: 128 VIIIEPFF-DCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMI 186

Query: 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---EG--DH 223
            +  P NP G  +    L+ +++LCK      V D  YE+ +++  +H  +    G  + 
Sbjct: 187 IINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWER 246

Query: 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH-------LA 276
            + + S  K + + GW++G+   P  +      L  V  N     +   Q          
Sbjct: 247 TITIGSAGKTFSLTGWKIGWAYGPEAL---LKNLQMVHQNCVYTCATPIQEAIAVGFETE 303

Query: 277 LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---------- 326
           L  L++   +      +L+  R+ +   L+ +G       +G  ++ A            
Sbjct: 304 LKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTV-PQGGYFMVADWSSLDSKVDLT 362

Query: 327 -PEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRISFGGLVEDDCK----- 373
                  D+   +W+    G+  IP  A             +R  F        K     
Sbjct: 363 QETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCF-------FKKDENL 415

Query: 374 -AAADRLRR 381
             AA+ LR+
Sbjct: 416 QKAAEILRK 424

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  183 bits (466), Expect = 6e-54
 Identities = 73/352 (20%), Positives = 135/352 (38%), Gaps = 28/352 (7%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL---YKSSVMVTAGANQ 100
            P+  ++  ++ +  P   KYGA  G    + A+V    ++  +    +  V +  G   
Sbjct: 61  TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKN 120

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
             V +   + + GD V++  P Y   Y++   +     + +         PD   ++   
Sbjct: 121 GLVAVPTCVINPGDYVLLPDPGYT-DYLAGVLLADGKPVPL-NLEPPHYLPDWSKVDS-- 176

Query: 160 ETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC- 217
           +     KL+  +  P NP+G+   + +        K   + +V D  Y  F +D +    
Sbjct: 177 QIIDKTKLI-YLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSI 235

Query: 218 -CVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 274
              E   D  + ++S SK Y M G+RVG+     ++      L K Q +         Q 
Sbjct: 236 LASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDM---IQALKKYQTHTNAGMFGALQD 292

Query: 275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334
            A+Y+L    +++ E+       R+     L+          +G IY+W   P    D  
Sbjct: 293 AAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-LPFVHAKGGIYVWLETPP-GYDSE 350

Query: 335 EVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLV--EDDCKAAADRLRR 381
           +  ++L     ++V PG   G  G   ++RIS   L   +     AA RL  
Sbjct: 351 QFEQFLVQEKSILVAPGKPFGENG-NRYVRIS---LALDDQKLDEAAIRLTE 398

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  183 bits (466), Expect = 6e-54
 Identities = 83/420 (19%), Positives = 155/420 (36%), Gaps = 59/420 (14%)

Query: 8   AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           AKR    +  + V+  +L     + V+L QG     PP    E++ +  +  ++++Y   
Sbjct: 2   AKRIEGLDSNVWVEFTKLAA-DPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60

Query: 68  EGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
            G P L  AL     +  +        ++V  GA  +  N +  L D GD V++  P+Y 
Sbjct: 61  FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY- 119

Query: 125 NSYMSF-QMTGVTHILV---GPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVNPGNP 176
           + Y    +M G   + +      +       +DW    + LE+K +   K + +  P NP
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFS 231
            G     + L+ I+DLC    +  + D  YE+ +Y G  H  +       +  + + S  
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239

Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-------P 284
           K + + GW++G+   P+ +      L  VQ N     +   Q     +            
Sbjct: 240 KTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296

Query: 285 EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL----------PEKHLDDF 334
            +     K+L   R+ +   L+ +G   +   +G  ++ A +                D+
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIV-PDGGYFIIADVSSLGADLSDMNSDEPYDY 355

Query: 335 EVVRWLAHRHGVVVIPGGACGCRGH-------LRISFGGLVEDDCK------AAADRLRR 381
           + V+W+     +  IP  A             +R  F        K      AA +  R 
Sbjct: 356 KFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCF-------IKKDSTLDAAEEIFRA 408

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  180 bits (459), Expect = 2e-53
 Identities = 91/406 (22%), Positives = 167/406 (41%), Gaps = 64/406 (15%)

Query: 7   LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVWD 58
           L+KR L  E    M I+   Q+L    K  + L  G    +P    PK  +++  +    
Sbjct: 2   LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIG----EPDFNTPKPIVDEGIK---- 53

Query: 59  PSI----SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDA 112
            S+    + Y    G+ ELR+ + +    + K       +++T G++      + ++ D 
Sbjct: 54  -SLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDD 112

Query: 113 GDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP--KLVS 169
           GD V++  P Y   Y +F +  G   +            ++      LE   +   K + 
Sbjct: 113 GDEVLIQNPCYP-CYKNFIRFLGAKPVFC------DFTVES------LEEALSDKTKAII 159

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEG--DHV 224
           + +P NP G  I     + I +       +++ D  Y   +Y+G K       +   +  
Sbjct: 160 INSPSNPLGEVID----REIYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKT 214

Query: 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP 284
           + +  FSK Y M GWR+GY+    E+      +LK+Q N+ I A  ISQ+ AL +     
Sbjct: 215 ILINGFSKLYAMTGWRIGYVISNDEI---IEAILKLQQNLFISAPTISQYAALKAF-EKE 270

Query: 285 EW--VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 342
               +   +K+  R R ++ + +   G        GA Y++  + E   D  E    L  
Sbjct: 271 TEREINSMIKEFDRRRRLVLKYVKDFGWEVNN-PIGAYYVFPNIGE---DGREFAYKLLK 326

Query: 343 RHGVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385
              V + PG   G+ G + ++RIS+     ++ K   +R++  L +
Sbjct: 327 EKFVALTPGIGFGSKG-KNYIRISY-ANSYENIKEGLERIKEFLNK 370

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  180 bits (460), Expect = 5e-53
 Identities = 87/431 (20%), Positives = 152/431 (35%), Gaps = 63/431 (14%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKE-LVWDPSISKY 64
             A+R    +    V+  +L     + V+L QG   + PP  A+E  +  +  D  +++Y
Sbjct: 5   LQARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQY 63

Query: 65  GADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
               G P L   L     +          +V+VT G   A       L D GD V++  P
Sbjct: 64  TKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEP 123

Query: 122 YYFNSYMSF-QMTGVTHILV----GPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVN 172
           ++ + Y     M G   + V    GP  +  L   ++W      L  K T   K + +  
Sbjct: 124 FF-DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNT 182

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNL 227
           P NP G       L+ ++ LC+      + D  Y++ +YDG +H  +       +  + +
Sbjct: 183 PNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTI 242

Query: 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQ------ 281
            S  K +   GW+VG++  P  +      L  V  N        SQ     S +      
Sbjct: 243 GSAGKTFSATGWKVGWVLGPDHI---MKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLF 299

Query: 282 -TGPEWVTERVKDLVRNREIIREALSPLG------EGA------VKGGEGAIYLWARLPE 328
                +  +  + + R R+ +  +L  +G      +G+      +               
Sbjct: 300 RQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDIS-DFKRKMPDLPGAV 358

Query: 329 KHLDDFEVVRWLAHRHGVVVIPGGA-------CGCRGHLRISFGGLVEDDCK------AA 375
               D   V+W+    G+V IP               ++R  F        K      A 
Sbjct: 359 DEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCF-------VKDEATLQAM 411

Query: 376 ADRLRRGLEEL 386
            ++LR+   EL
Sbjct: 412 DEKLRKWKVEL 422

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  178 bits (455), Expect = 1e-52
 Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 29/338 (8%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G+PELR+AL +K  +EN L       +VT G +QA  N+   + D GD V++ 
Sbjct: 62  TKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL 121

Query: 120 APYYFNSY--MSFQMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTP--KLVSVVN 172
           +PY+  SY  M  +  G   + V     +      P+       +    TP  K + V +
Sbjct: 122 SPYWV-SYPEM-VRFAGGVVVEV-ETLPEEGFVPDPER------VRRAITPRTKALVVNS 172

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSF 230
           P NP+G   P+ +L+ ++ L      +LV D  YE+ +Y+G       V  +H + +   
Sbjct: 173 PNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGA 232

Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL---QTGPEWV 287
           +KA+ M GWR+GY   P EV      +  V          I+Q   L +L   +    +V
Sbjct: 233 AKAFAMTGWRIGYACGPKEV---IKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFV 289

Query: 288 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347
               +   R R+++ E L+ LG  AV+   GA Y+         D+      L    GV 
Sbjct: 290 EMAREAYRRRRDLLLEGLTALGLKAVR-PSGAFYVLMDTSPIAPDEVRAAERLLE-AGVA 347

Query: 348 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385
           V+PG      GH+R+S+    E++ + A +R  R L  
Sbjct: 348 VVPGTDFAAFGHVRLSY-ATSEENLRKALERFARVLGR 384

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  180 bits (458), Expect = 2e-52
 Identities = 89/408 (21%), Positives = 153/408 (37%), Gaps = 36/408 (8%)

Query: 4   YAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK 63
            +KL    L  E+        L       +SL  G      P++    + +   + S  +
Sbjct: 30  MSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIE 89

Query: 64  ----YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
               YGA++G   LR A+ K       +    V V+ GA      +   +  +  ++ + 
Sbjct: 90  GYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQ 148

Query: 120 APYYFNSYM-SFQMTGVTHILVGPCSSKT------LHPDADWLEKTLETKPTPKLVSVVN 172
            P Y  +Y+ S  + G T                   P+  +    L T     ++   +
Sbjct: 149 DPSY-PAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LSTVGRTDIIFFCS 206

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEG--DHVVNLF 228
           P NP+G       L ++ +  K  GS +V D+ Y  +M D        + G  +  +   
Sbjct: 207 PNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETA 266

Query: 229 SFSKAYGMMGWRVGYIAYPSEV-----EGFATQLLKVQDNIPICASIISQH--LALYSLQ 281
           SFS   G  G R+G+   P ++        A    ++       AS ISQ   LA  + +
Sbjct: 267 SFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPE 326

Query: 282 TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 341
            G E + + +     N  II +  + LG   V GG+ A Y+W   P      ++V   + 
Sbjct: 327 -GLEAMHKVIGFYKENTNIIIDTFTSLGY-DVYGGKNAPYVWVHFPN--QSSWDVFAEIL 382

Query: 342 HRHGVVVIPG---GACGCRGHLRIS-FGGLVEDDCKAAADRLRRGLEE 385
            +  VV  PG   G  G  G +R+S FG    ++   A  R ++  + 
Sbjct: 383 EKTHVVTTPGSGFGPGG-EGFVRVSAFGH--RENILEACRRFKQLYKH 427

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  180 bits (458), Expect = 2e-52
 Identities = 80/395 (20%), Positives = 142/395 (35%), Gaps = 39/395 (9%)

Query: 21  QIQELVRGAKNA------VSLAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGL 70
           +I    +  +        +SL  G      PK   + + +     +  +    YGA++G 
Sbjct: 54  EIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQ 113

Query: 71  PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
             LR+A+              + ++ G+      I +    +  +V +  P Y     + 
Sbjct: 114 GALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMF-GSKPTVAVQDPSYPVYVDTS 172

Query: 131 QMTGVTHILVGPCSSK----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
            M G+T    G           +PD  +    L       ++   +P NP+G       L
Sbjct: 173 VMMGMTGDHNGTGFDGIEYMVCNPDNHFFP-DLSKAKRTDIIFFCSPNNPTGAAATRAQL 231

Query: 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRV 241
             + +  +  GS LV D  Y  ++ +         + G  +  +   SFSK  G  G R+
Sbjct: 232 TELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRL 291

Query: 242 GYIAYPSEV-----EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLV 295
           G+   P  +     E       +V       AS I Q   L  LQ  G + +   +K   
Sbjct: 292 GWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYK 351

Query: 296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---G 352
            N +I++   + +G  +V GG+ A Y+W   P K    ++V   +  R  +V  PG   G
Sbjct: 352 ENAQILKTTFTEMGF-SVYGGDDAPYIWVGFPGK--PSWDVFAEILERCNIVTTPGSGYG 408

Query: 353 ACGCRGHLRISFGGLV--EDDCKAAADRLRRGLEE 385
             G  G +R S        ++   A  R +    +
Sbjct: 409 PAG-EGFVRAS---AFGSRENILEAVRRFKEAYGK 439

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  176 bits (449), Expect = 3e-51
 Identities = 68/432 (15%), Positives = 138/432 (31%), Gaps = 68/432 (15%)

Query: 18  IMVQIQELVRGAKNAVSLAQGV--VYWQPPKMAMEKVKELVWDP-----------SISKY 64
           +M  + + ++  +    L  G         ++ +E  K L  D            S++ Y
Sbjct: 20  LMDDLGDALKSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANY 79

Query: 65  GADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDA---------- 112
              +G     DALV   N+      +S  + +T G+  AF  +      A          
Sbjct: 80  SNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKE 139

Query: 113 -----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC----------SSKTLHPDADWLEK 157
                   ++   P Y   Y    + G     V P                  D + LE 
Sbjct: 140 SKSVDKSILLPLTPEYI-GYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALEN 198

Query: 158 TLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH 216
                +     +    P NP+G  + +  +  ++++ K     L++DN Y     +    
Sbjct: 199 LPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYS 258

Query: 217 CCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 274
                  ++ +  FS SK  G+ G R G I   ++V      +  +   + +  +     
Sbjct: 259 DAHLNWDNNTILCFSLSK-IGLPGMRTGIIVADAKV---IEAVSAMNAVVNLAPTRFGAA 314

Query: 275 LALYSLQTG--PEWVTERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLP 327
           +A   +      +     +K   + +     +++++AL        K  EGAI+LW    
Sbjct: 315 IATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHK-PEGAIFLWLWFK 373

Query: 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGC----------RGHLRISFGGLVEDDCKAAAD 377
           +  +   ++   L    G +++P                   +R+S     E        
Sbjct: 374 DLPISTLDLYERLK-AKGTLIVPSEYFFPGVDVSDYQHAHECIRMSI-AADEQTLIDGIK 431

Query: 378 RLRRGLEELVKD 389
            +   + EL  +
Sbjct: 432 VIGEVVRELYDN 443

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  175 bits (447), Expect = 3e-51
 Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 19/341 (5%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           + YG  EGLPELR A+V++  ++N +      V VTA   +A   I   L D GD +++ 
Sbjct: 72  NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVP 131

Query: 120 APYYFNSYMSF-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPS 177
            P Y   Y    +  G   +       +    PD D + K + T  T K ++V+NP NP+
Sbjct: 132 GPSYP-PYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDIRKKI-TDRT-KAIAVINPNNPT 187

Query: 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKA 233
           G    ++ L+ I ++       ++ D  Y+   Y+G +H       +   V+ +   SK 
Sbjct: 188 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKV 246

Query: 234 YGMMGWRVGYIAY--PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 291
           Y   GWR+GY+ +  P        + +     I +C +  +Q  A+  L    +++ E +
Sbjct: 247 YFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYM 306

Query: 292 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDFEVVRWLAHRHGVVVIP 350
           K L   R+ I + L+ +   +    +GA Y++ ++      +D E V  + H   V+ + 
Sbjct: 307 KKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVH 366

Query: 351 GGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389
           G   G    GH R  F   +E   + A DR  + ++E +K+
Sbjct: 367 GSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFEKFMKERLKE 406

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  175 bits (446), Expect = 6e-51
 Identities = 76/419 (18%), Positives = 145/419 (34%), Gaps = 54/419 (12%)

Query: 6   KLAKRALETEMPI--MVQIQELVRGAKNAVSLAQG----VVYWQPPKMAMEKVKELVWDP 59
            ++  A     PI  +    +     K  + L+ G              ++K+KE +   
Sbjct: 7   SMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQ 66

Query: 60  SISKYGADEGLPELRDALVKKLNQENKLYKSS--------VMVTAGANQAFVNIVLTLCD 111
             + Y    G PE R+A+           +          V++ +G +   +  +  +CD
Sbjct: 67  ECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD 126

Query: 112 AGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADW---LEKTLETKPTP-- 165
           AGD  ++  P +   Y +  +  G+              P+ DW   L++ +        
Sbjct: 127 AGDYALVPQPGFP-HYETVCKAYGIGMHFY------NCRPENDWEADLDE-IRRLKDDKT 178

Query: 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR----KHCCV-- 219
           KL+ V NP NP G+    + ++ I  L +     L  D  Y   ++ G+        V  
Sbjct: 179 KLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238

Query: 220 --EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT--QLLKVQDNIPICASIISQHL 275
                  V L   +K   + GWR+G++ Y        +  + LK    +      + Q  
Sbjct: 239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAA 298

Query: 276 ALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEGAIYLWARLPEK 329
              +L   P E + + V  +  +   +   +         G       GA+YL +R+  +
Sbjct: 299 LGEALLNTPQEHLDQIVAKIEESAMYLYNHIG-----ECIGLAPTMPRGAMYLMSRIDLE 353

Query: 330 HL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384
                  D E    L     V V+PG      G  R++      +  + A +R++   +
Sbjct: 354 KYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT-TRPVEVYREAVERIKAFCQ 411

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  172 bits (439), Expect = 3e-50
 Identities = 89/336 (26%), Positives = 146/336 (43%), Gaps = 33/336 (9%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
            KY    G+ ELR+ + K++ +  K       V+VT GA QA  N  + L D GD V++F
Sbjct: 72  VKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVF 131

Query: 120 APYYFNSYMSF-QMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTP--KLVSVVNP 173
           +P +  SY+    + G T  +V             +       +E       K V + +P
Sbjct: 132 SPVWV-SYIPQIILAGGTVNVV-ETFMSKNFQPSLEE------VEGLLVGKTKAVLINSP 183

Query: 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEG--DHVVNLF 228
            NP+G       L+ +  L K    +++ D  Y+  +Y   +      V    D +V + 
Sbjct: 184 NNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYIN 242

Query: 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 288
            FSK++ M GWRVGY+    +V   AT + K+Q +   C + ++Q+ AL +L       +
Sbjct: 243 GFSKSHSMTGWRVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKAL-EVD--NS 296

Query: 289 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348
             V+     +  + E L  +G   V+  EGA YL+    +   DD +    L     V +
Sbjct: 297 YMVQTFKERKNFVVERLKKMGVKFVE-PEGAFYLF---FKVRGDDVKFCERLLEEKKVAL 352

Query: 349 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384
           +PG A    G +R+SF     +    A DR+   L 
Sbjct: 353 VPGSAFLKPGFVRLSF-ATSIERLTEALDRIEDFLN 387

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  171 bits (436), Expect = 2e-49
 Identities = 56/365 (15%), Positives = 106/365 (29%), Gaps = 45/365 (12%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQA----FVNIVLTLCDAGDS 115
           S Y   +GLPEL+    +       +   +   + T G+ Q     F+    T  +    
Sbjct: 76  SIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYG 135

Query: 116 VVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174
            +   P + N      ++ G           +            L+T      +   NP 
Sbjct: 136 TLFIDPGF-NLNKLQCRILGQKFESFDLFEYRGEKLREKLESY-LQTGQF-CSIIYSNPN 192

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----------DHV 224
           NP+   + +  L+ I +L       ++ D  Y    +        E           D+ 
Sbjct: 193 NPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNY 252

Query: 225 VNLFSFSKAYGMMGWRVGYIAYPSEV--------------EGFATQLLKV-QDNIPICAS 269
           +   S SKA+   G R+G +    ++                F   L       +   A+
Sbjct: 253 ILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGAT 312

Query: 270 IISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIY 321
             +Q      L +   G     + V +  R   I+++     G   V            +
Sbjct: 313 HSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGF 372

Query: 322 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG-HLRISFGGLVEDDCKAAADRLR 380
            +  +  K +D  +++          +        R   +RI    L E        RL+
Sbjct: 373 YFT-VGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQ 431

Query: 381 RGLEE 385
               E
Sbjct: 432 MLNAE 436

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  168 bits (427), Expect = 4e-48
 Identities = 70/419 (16%), Positives = 154/419 (36%), Gaps = 47/419 (11%)

Query: 4   YAKLAKRALETEMP--IMVQIQELVRGAKNAVSLAQGVVYWQPPKM---AMEKVKELVWD 58
           +A L+        P  I+ Q  E         +   G+   +  KM   +++ +   +  
Sbjct: 22  FAMLSDLGQNMFYPKGILSQSAE---AKSTTYNATIGMATNKDGKMFASSLDAMFNDLTP 78

Query: 59  PSISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGD 114
             I  Y   +G+ ELRD   +K+ ++N        S  +VT         +     +  D
Sbjct: 79  DEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDD 138

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-P 173
           ++++    + N  + F      ++   P   K  H   D L + L++    K++ ++N P
Sbjct: 139 TILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYP 198

Query: 174 GNPSG-TYIPERLLKRISDLCKAAGS-----WLVVDNTYEYFMYDGRKHCCV-------- 219
            NP+G T   + +   I +  KA  +       VVD+ Y    Y+      +        
Sbjct: 199 NNPTGYTPTHKEV-TTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLH 257

Query: 220 -EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQ 273
                 + L   +K +   G+RVG++ + +  +     L       ++ NI     + +Q
Sbjct: 258 SNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNI-SSGPLPTQ 316

Query: 274 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG------EGAIYLWARLP 327
               + L+   ++  E  +++   +E        +                  ++  ++ 
Sbjct: 317 SAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKV- 375

Query: 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
              +D   + + L  ++ + VI   A      +RI+F  + +DD     D + + +++L
Sbjct: 376 -HDVDPEALRKHLIDKYSIGVIALNATD----IRIAFSCVEKDDIPHVFDSIAKAIDDL 429

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  162 bits (412), Expect = 4e-46
 Identities = 68/360 (18%), Positives = 115/360 (31%), Gaps = 46/360 (12%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGDS------ 115
           Y   +G   L +AL   L +          + +T G+  AF  +                
Sbjct: 71  YDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKV 130

Query: 116 VVMFAPYY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
           +   AP Y            F        L+ P      H D +     L       ++ 
Sbjct: 131 LFPLAPEYIGYADSGLEDDLFVSARPNIELL-PEGQFKYHVDFE----HLHIGEETGMIC 185

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVN 226
           V  P NP+G  I +  L ++  L       LV+DN Y    + G            +++ 
Sbjct: 186 VSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYG-VPFPGIIFSEARPLWNPNIIL 244

Query: 227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW 286
             S SK  G+ G R G I    +     T +  +   I +    +   +    ++     
Sbjct: 245 CMSLSK-LGLPGSRCGIIIANDKT---ITAIANMNGIISLAPGGMGPAMMCEMIKRNDLL 300

Query: 287 --VTERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 339
                 +K     R      IIR  LS       K  EGAI+LW    +  +    + + 
Sbjct: 301 RLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHK-PEGAIFLWLWFKDLPITTELLYQR 359

Query: 340 LAHRHGVVVIPGGA---------CGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG 390
           L    GV+++PG                 +R+++     D  +A    L   +E   ++G
Sbjct: 360 LK-ARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIERAWREG 417

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  153 bits (389), Expect = 7e-42
 Identities = 72/396 (18%), Positives = 135/396 (34%), Gaps = 74/396 (18%)

Query: 64  YGADEGLPELRDALV-KKLNQENKL-----YKSSVMVTAGANQAFVNIVLTL-----CDA 112
           Y     +  + + +V + + +E           ++    G   A   I  +L       A
Sbjct: 134 YPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKA 193

Query: 113 GDSVVMFAPYYFNSYMSF-QMTGVTHILVG-PCSSKT-LHPDADWLEKTLETKPTPKLVS 169
           GD V +  P  F  Y+   ++       V                L+K L+     K+  
Sbjct: 194 GDKVAIGMPV-FTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDK-LKDPAI-KIFF 250

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGS--WLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227
            VNP NP    + +R L+R+ ++         ++ D+ Y  F  D +    +  ++ + +
Sbjct: 251 CVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLV 310

Query: 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-------------------- 267
           +SFSK +G  GWR+G +A   +   F   L K+Q++  +                     
Sbjct: 311 YSFSKYFGATGWRLGVVAAHQQNV-FDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDR 369

Query: 268 ---------------ASIISQH----LALYSLQTGPEWVTERVKDLVRNREIIREAL--- 305
                           S   Q      +L++L    +     +K L+R RE         
Sbjct: 370 LVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELGM 429

Query: 306 ---SPLGEGA------VKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 354
                           ++     +Y   ++    K     +++  +A   G+V++PG   
Sbjct: 430 PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGF 489

Query: 355 G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389
           G  R   R S   L E +  A    LR+  +EL  +
Sbjct: 490 GSNRPSGRASLANLNEYEYAAIGRALRKMADELYAE 525

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  149 bits (378), Expect = 2e-40
 Identities = 64/402 (15%), Positives = 125/402 (31%), Gaps = 83/402 (20%)

Query: 64  YGADEGLPELRDALVKKLNQENKL-----YKSSVMVTAGANQAFVNIVLTLC-----DAG 113
              D  L      +   L + +        ++ +  T G   A V    +L        G
Sbjct: 134 PVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKG 193

Query: 114 DSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWL--EKTLETKPTP--KLV 168
           D + +  P  F  Y+   ++     + V    S       DW      +E    P  K +
Sbjct: 194 DKIAINEPI-FTPYLRIPELKDYELVEV-DLHSY---EKNDWEIEPNEIEKLKDPSIKAL 248

Query: 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTYEYFMYDGRKHCCVEGDHVVNL 227
            VVNP NP+        L  I    +     +++ D  Y  F+ + +    V   + + +
Sbjct: 249 IVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLV 308

Query: 228 FSFSKAYGMMGWRVGYIAYPSE-------------------------------------- 249
           +S+SK +G  GWR+G IA   +                                      
Sbjct: 309 YSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRL 368

Query: 250 ------VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303
                 +  + T  L     I      ++  L   +  +   ++    K +    + + +
Sbjct: 369 CADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHD 428

Query: 304 ALSPLGEGAVKGGEGAIYLWARLPE---------------KHLDDFEVVRWLAHRHGVVV 348
           A+    +          Y    +                  + +  + +  LA ++GVV+
Sbjct: 429 AMQAPKDETDT--NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVL 486

Query: 349 IPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389
           + G   G   G LR+S   L  +D      ++   L+E  ++
Sbjct: 487 VDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEE 528

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score =  146 bits (371), Expect = 3e-40
 Identities = 94/397 (23%), Positives = 165/397 (41%), Gaps = 42/397 (10%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQP-----PKMAMEKVKELVW--DPSISKYGADEGL 70
           +M +  EL +     +SLA G     P     P+  + ++ + V   +P    Y    G+
Sbjct: 22  VMKKASELQKKGVKLISLAAGD----PDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGI 77

Query: 71  PELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM 128
           PELR+ L   L + + L     ++++T G   A   +   L D GD V+   P Y N+ +
Sbjct: 78  PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLL 137

Query: 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT----PKLVSVV-NPGNPSG-TYIP 182
           +F+  G     V P  +  +  D   LE+ ++         KL+  +    NP G T   
Sbjct: 138 AFEQLGAKIEGV-PVDNDGMRVDL--LEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSM 194

Query: 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-----KHCCVEGDHVVNLFSFSKAYGMM 237
           ER  K + ++       ++ D  Y +  Y+G      K    EG  V+   + SK     
Sbjct: 195 ER-RKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEG-RVIVAGTLSK-VLGT 251

Query: 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLV 295
           G+R+G+I    E+     ++L  +  I  CA  ISQ++AL  L+ G   ++  E      
Sbjct: 252 GFRIGWIIAEGEI---LKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGY 308

Query: 296 RNR-EIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA 353
           + + +I+ +AL   L           +++   LPE   D       L  R GVVV+PG  
Sbjct: 309 KEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPE-GADGISFANELMEREGVVVVPGKP 367

Query: 354 C----GCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
                  +  +R++F    +++      +L +  +E 
Sbjct: 368 FYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEK 404

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  144 bits (364), Expect = 4e-39
 Identities = 53/361 (14%), Positives = 94/361 (26%), Gaps = 67/361 (18%)

Query: 65  GADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTL--------CDAGD 114
            ++    EL   + +              ++   G  Q    +V++L             
Sbjct: 97  VSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPES 156

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174
            VV  AP+Y   +        T              +A          P   +  V +P 
Sbjct: 157 KVVAHAPFYP-VFRE-----QTKYFDKK--GYVWAGNAANYVNVS--NPEQYIEMVTSPN 206

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY 234
           NP G  +   ++K         G   + D  Y +  Y        + D  + LF+ SK  
Sbjct: 207 NPEGL-LRHAVIK---------GCKSIYDMVYYWPHYT---PIKYKADEDILLFTMSKFT 253

Query: 235 GMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKD 293
           G  G R G+ +     V      LL             +Q  +L  L+     V  +   
Sbjct: 254 GHSGSRFGWALIKDESV---YNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGT 310

Query: 294 -----------LVRNREIIREALSPLGEGAVKGGEGAIYL--------------WARLPE 328
                      L      I   L      + +    + Y               W +   
Sbjct: 311 MRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW 370

Query: 329 KHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELV 387
           +   D            +    G        ++R+S     +DD       L+  ++   
Sbjct: 371 EEDKDCY---QTFQNGRINTQNGVGFEASSRYVRLSLIKT-QDDFDQLMYYLKDMVKAKR 426

Query: 388 K 388
           K
Sbjct: 427 K 427

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  142 bits (358), Expect = 1e-38
 Identities = 70/338 (20%), Positives = 112/338 (33%), Gaps = 53/338 (15%)

Query: 71  PELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGD----SVVMFAPYYF 124
           PEL DA+                ++V  G+ Q     V  L         SVV  AP+Y 
Sbjct: 71  PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFY- 129

Query: 125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184
           ++Y        T  +           DA         K  P +  V +P NP GT     
Sbjct: 130 STY-----VEETTYVRSG--MYKWEGDAW-----GFDKKGPYIELVTSPNNPDGT----- 172

Query: 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY- 243
           + + + +      + ++ D  Y +  Y          DH + LF+FSK  G  G R+G+ 
Sbjct: 173 IRETVVNRPDDDEAKVIHDFAYYWPHYTPITR---RQDHDIMLFTFSKITGHAGSRIGWA 229

Query: 244 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQ----------TGPEWVTERVKD 293
           +    EV   A ++++      I  S  SQ      L               +     + 
Sbjct: 230 LVKDKEV---AKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREM 286

Query: 294 LVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPE-------KHLDDFEVVRWLAHRH 344
           +    E +RE +       +         Y    L            ++ ++V  L  RH
Sbjct: 287 MKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELR-RH 345

Query: 345 GVVVIPGGACG-CRGHLRISFGGLVEDDCKAAADRLRR 381
            V+   G  CG  + H+R+S     ED      +RL  
Sbjct: 346 KVMSRAGERCGSDKKHVRVSMLSR-EDVFNVFLERLAN 382

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  137 bits (347), Expect = 4e-37
 Identities = 54/364 (14%), Positives = 115/364 (31%), Gaps = 48/364 (13%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQA 101
            PK   + +K      +   Y        LR A      +    +L ++ ++ T G+ + 
Sbjct: 37  TPKFIQDALKNHTHSLN--IYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREV 94

Query: 102 FVNIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK-T 158
             N    +       ++    P+Y     + +      +L+       L  + D+     
Sbjct: 95  LFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM------PLTKENDFTPSLN 148

Query: 159 LETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH- 216
            +      LV ++N P NP+G  +    L     L       L+ D  Y   +Y+     
Sbjct: 149 EKELQEVDLV-ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYS-EIYENTPPP 206

Query: 217 -----CCVEGDH----VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267
                C + G+     V+ + S SK     G R G+IA  S +     +    +  +   
Sbjct: 207 SLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLE---KYKAFRAYLGYT 263

Query: 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 327
           ++   Q  +  +                 N ++ R+               + Y++  + 
Sbjct: 264 SANAIQKASEAAW-LDDRHAEFFRNIYANNLKLARKIFKN-----TLIYPYSFYVYLPVQ 317

Query: 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDD--CKAAADRLRR 381
               +     + L    G++ +P    G       ++R++   LV D    +   + +  
Sbjct: 318 ----NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLA---LVYDTPLLEKPLEIIET 370

Query: 382 GLEE 385
             E 
Sbjct: 371 YREN 374

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score =  137 bits (347), Expect = 7e-37
 Identities = 91/410 (22%), Positives = 157/410 (38%), Gaps = 54/410 (13%)

Query: 6   KLAKRALETEMPIMVQIQELVRGA--KNAVSLAQGVVYWQP-----PKMAMEKVKELVWD 58
              K A   +      I+EL++       +S A G+    P     PK    +    +  
Sbjct: 9   AFGKGAGRIQAST---IRELLKLTQRPGILSFAGGL----PAPELFPKEEAAEAAARILR 61

Query: 59  ---PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDS 115
                  +Y   EG   LR  + + +          V++T G+ QA   +     D G  
Sbjct: 62  EKGEVALQYSPTEGYAPLRAFVAEWIGVRP----EEVLITTGSQQALDLVGKVFLDEGSP 117

Query: 116 VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPG 174
           V++ AP Y  +  +F++ G   + V P   +    DA  LE+ L+ +  P+ + ++ +  
Sbjct: 118 VLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEGPDLDA--LEEVLKRER-PRFLYLIPSFQ 173

Query: 175 NPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-----KHCCVEG--DHVVN 226
           NP+G         KR+  +    G  +V D+ Y    +             E     V+ 
Sbjct: 174 NPTGGLTPLPA-RKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIY 232

Query: 227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW 286
           L SFSK     G RV +     E      +L++ +    +   +++Q L    L+ G   
Sbjct: 233 LGSFSKVL-SPGLRVAFAVAHPEA---LQKLVQAKQGADLHTPMLNQMLVHELLKEGFSE 288

Query: 287 VTERVKDLVRNR-EIIREALSP-LGEGAV----KGGEGAIYLWARLPEKHLDDFEVVRWL 340
             ERV+ + R + + +  AL   + +       KGG   +++W  LP+  L    + R  
Sbjct: 289 RLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG---MFVWMELPK-GLSAEGLFR-R 343

Query: 341 AHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           A    V  +PGG      G    LR+S+  L  +       RL R L+ L
Sbjct: 344 ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGL 393

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score =  135 bits (341), Expect = 9e-36
 Identities = 91/418 (21%), Positives = 167/418 (39%), Gaps = 52/418 (12%)

Query: 6   KLAKRALETEMPIMVQIQELVRGA--KNAVSLAQGVVYWQP-----PKMAMEKVKELVWD 58
           K++K     +  I   I+E+++ A  K+A+S   GV    P     P+  + ++ + + +
Sbjct: 20  KISKIGQNMKSSI---IREILKFAADKDAISFGGGV----PDPETFPRKELAEIAKEIIE 72

Query: 59  ---PSISKYGADEGLPELRDALVKKLNQENKLYKSS---VMVTAGANQAFVNIVLTLCDA 112
                  +Y   EG P L+  ++K L +   +       ++ T G+ QA   I     D 
Sbjct: 73  KEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDD 132

Query: 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET------KPTPK 166
               V+  P Y  +  +F+      ++V P     +  +   LE+ L            K
Sbjct: 133 ESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDGMDLNV--LERKLSEFDKNGKIKQVK 189

Query: 167 LVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----E 220
            + VV N  NP+G T   E+  K + ++ +    ++V D+ Y    Y+G     +     
Sbjct: 190 FIYVVSNFHNPAGVTTSLEK-RKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG 248

Query: 221 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280
            + VV L +FSK     G R+G +A   E      ++++ + +  +C+  I+  LA   L
Sbjct: 249 PERVVLLNTFSK-VLAPGLRIGMVAGSKEF---IRKIVQAKQSADLCSPAITHRLAARYL 304

Query: 281 QTGP-EWVTERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334
           +        +   +L R +       + E  S +        EG +++W  LPE   D +
Sbjct: 305 ERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE-GFDTW 363

Query: 335 EVVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
           E+    A R  V  +PG            +R+SF    ++       RLR  + E  K
Sbjct: 364 EMFE-YAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 420

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score =  134 bits (340), Expect = 1e-35
 Identities = 97/417 (23%), Positives = 181/417 (43%), Gaps = 56/417 (13%)

Query: 6   KLAKRALETEMPIMVQIQELVRGA--KNAVSLAQGVVYWQP-----PKMAMEKVKELVWD 58
             +K+ALE        ++EL++     + +SLA G+    P     PK  +  +   + +
Sbjct: 53  FFSKKALEMRASE---VRELLKLVETSDIISLAGGL----PNPKTFPKEIIRDILVEIME 105

Query: 59  ---PSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGD 114
                  +YG  +G   LR+ L+K L +   + + + +M+T+G+ QA   I     + GD
Sbjct: 106 KYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGD 165

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT----PKLVSV 170
            VV+ AP Y  +  +F      +I + P   + +  +   LE+ L+   +     K+V  
Sbjct: 166 IVVVEAPTYLAALQAFNFYEPQYIQI-PLDDEGMKVEI--LEEKLKELKSQGKKVKVVYT 222

Query: 171 V-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-----KHCCVEGDHV 224
           V    NP+G  + E   K + +L       +V D+ Y    Y G      K    EG  V
Sbjct: 223 VPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEG-RV 281

Query: 225 VNLFSFSK--AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 282
           + L +FSK  A G    R+G++     +     ++   + +  +C ++  Q +A   +  
Sbjct: 282 IYLGTFSKILAPGF---RIGWMVGDPGI---IRKMEIAKQSTDLCTNVFGQVVAWRYVDG 335

Query: 283 GP-EWVTERVKDLVRNR-EIIREALSP-LGEGAV----KGGEGAIYLWARLPEKHLDDFE 335
           G  E     ++   + R + + EAL   + EG      +GG   +++W  LP+  +D  +
Sbjct: 336 GYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGG---MFIWVTLPD-GIDSKK 391

Query: 336 VVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
           ++   A + GV  +PG A       +  +R++F  + ED       RL   ++E +K
Sbjct: 392 MLE-RAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  135 bits (341), Expect = 2e-35
 Identities = 68/397 (17%), Positives = 139/397 (35%), Gaps = 56/397 (14%)

Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS---VMVTAGAN 99
           +  K    ++ +     S+  Y A +G+  +R+ +   + + +    +    + +T GA+
Sbjct: 104 EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGAS 163

Query: 100 QAFVNIVLTLCDAGD---SVVMF-APYYFNSYM-SFQMTGVTHILVGPCSSKTLHPDADW 154
                I+  L   G    + VM   P Y   Y           +            + + 
Sbjct: 164 DGISTILKILVSGGGKSRTGVMIPIPQY-PLYSAVISELDAIQVNYYLDEENCWALNVNE 222

Query: 155 LEKTLETK---PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY 211
           L + ++       PK++ ++NPGNP+G     + ++ +         +L+ D  Y+  +Y
Sbjct: 223 LRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY 282

Query: 212 DGRKHCCV-------------EGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQL 257
                                    + +  S SK Y G  G+R GY+   +       QL
Sbjct: 283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQL 342

Query: 258 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-- 315
           +K+  ++ +C  +  Q  A+  +   P    E  +   R +E +   L+   +       
Sbjct: 343 VKLL-SVRLCPPVSGQA-AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFN 400

Query: 316 ---G------EGAIYLWAR--LPEKHL---------DDFEVVRWLAHRHGVVVIPG---G 352
              G      +GA+Y + R  +P K +          D      L    G+ V+PG   G
Sbjct: 401 QVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFG 460

Query: 353 ACGCRGHLRISFGGLV-EDDCKAAADRLRRGLEELVK 388
                 H R++   L   +  K    +++      ++
Sbjct: 461 QREGTYHFRMTI--LPPVEKLKTVLQKVKDFHINFLE 495

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  134 bits (338), Expect = 5e-35
 Identities = 86/394 (21%), Positives = 145/394 (36%), Gaps = 54/394 (13%)

Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQ 100
                  +++  ++   +   Y   +G+  LRDA+   +   +        + +T GA+ 
Sbjct: 109 ADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASP 168

Query: 101 AFVNIVLTLC-DAGDSVVMFAPYYFNSYM-SFQMTGVTHILVGPCSSKTLHPDADWLEKT 158
               ++  L  +  D +++  P Y   Y  S  + G   +      S     +   ++K 
Sbjct: 169 GVHLMMQLLIRNEKDGILVPIPQY-PLYSASIALHGGALVPYYLNESTGWGLETSDVKKQ 227

Query: 159 LE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DG 213
           LE         + + V+NPGNP+G  + E     I   CK  G  L+ D  Y+  +Y D 
Sbjct: 228 LEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDN 287

Query: 214 RKHCCV-----------EGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ 261
           +K               E   +V+  S SK Y G  G R GY            Q+ K+ 
Sbjct: 288 KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIA 347

Query: 262 DNIPICASIISQHLALY----------SLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311
            ++ +C++I  Q LA            S  +        +  L R  + +  A + L EG
Sbjct: 348 -SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL-EG 405

Query: 312 --AVKGGEGAIYLWAR--LPEKHL---------DDFEVVRWLAHRHGVVVIPG---GACG 355
               +  EGA+Y++ +  LP+K +          D      L    G+VV+PG   G   
Sbjct: 406 ITCNE-AEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVP 464

Query: 356 CRGHLRISFGGLV-EDDCKAAADRLRRGLEELVK 388
              H R +   L  ED   A   R     E  + 
Sbjct: 465 GTWHFRCTI--LPQEDKIPAVISRFTVFHEAFMS 496

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  129 bits (326), Expect = 7e-34
 Identities = 83/374 (22%), Positives = 141/374 (37%), Gaps = 60/374 (16%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK----SSVMVTAGAN 99
            PK+  + +   + +    KY    GLPELR A    L +          + ++   G+ 
Sbjct: 44  TPKVITDALTASLHELE--KYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSR 101

Query: 100 QAFVNIVLTLCD-----AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADW 154
           +A  + V T+ +        ++V   P+Y     +  + G        C + + +PD   
Sbjct: 102 EALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFA-NCPAPSFNPDWRS 160

Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
           + +  E     KLV V +P NPSG+ +     K + DL    G  +  D  Y    +DG 
Sbjct: 161 ISE--EVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN 218

Query: 215 K------HCCVEG---DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI- 264
           K           G     ++   S SK   + G R G++A  +E+       L  +    
Sbjct: 219 KPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLK---NFLLYRTYHG 275

Query: 265 -----PI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318
                P+  ASI     A        + V +  +      E +   L  + +  VK  + 
Sbjct: 276 SAMSIPVQRASIA----AW----DDEQHVIDNRRLYQEKFERVIPILQQVFD--VKLPDA 325

Query: 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---------GACGCRGHLRISFGGLVE 369
           + Y+W ++P+   DD    R L  +  + V+PG         G  G  G++RI    LV 
Sbjct: 326 SFYIWLKVPDG--DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPG-EGYVRI---ALVA 379

Query: 370 DD--CKAAADRLRR 381
           D   C  AA+ +  
Sbjct: 380 DVATCVKAAEDIVS 393

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score =  129 bits (325), Expect = 1e-33
 Identities = 74/433 (17%), Positives = 134/433 (30%), Gaps = 74/433 (17%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQP-PKM---AMEKVKELVWDPSIS 62
           + K A    + +  Q  E  +     +++ +G    QP       +   +  L     + 
Sbjct: 2   MTKEASRPALDLARQAYEAFKARGLNLNMQRG----QPADADFDLSNGLLTVLG-AEDVR 56

Query: 63  KYGAD--------EGLPELRDALVKKLNQENK---------LYKSSVMVTAGANQAFVNI 105
             G D         GLP  R      L+ + +         L    +++T          
Sbjct: 57  MDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGS 116

Query: 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165
                     +++  P Y   ++  Q  G   + V    S    PD D +E+   T P+ 
Sbjct: 117 TGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV-DMQSDG--PDVDAVERLAGTDPSV 173

Query: 166 KLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---- 219
           K +  V    NP G T   E+  +       A    +  D+ Y                 
Sbjct: 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFV 233

Query: 220 -------EGDHVVNLFSFSKAYGMM--GWRVGYIAYPSEVEGFATQLLKVQDNIPICASI 270
                    D      S SK   +   G  +G++A   +   + ++ L  Q    I  + 
Sbjct: 234 VLARDAGYPDRAFVFASTSK---ITFAGAGLGFVASSEDNIRWLSKYLGAQS---IGPNK 287

Query: 271 ISQHLALYSLQTGPEWVT---ERVKDLVRNR-----EIIREALSPLGEGAV----KGGEG 318
           + Q   +  L   P  +         ++  +     E++R  L   GE A     KGG  
Sbjct: 288 VEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGG-- 345

Query: 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGGLVEDDC 372
             ++     E       VV+ LA   GV + P GA           +LR++      ++ 
Sbjct: 346 -YFISLDTAEP--VADRVVK-LAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEV 401

Query: 373 KAAADRLRRGLEE 385
           + A   +   +  
Sbjct: 402 RTAMQVVAACIRL 414

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score =  127 bits (320), Expect = 6e-33
 Identities = 76/365 (20%), Positives = 135/365 (36%), Gaps = 58/365 (15%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKS---------SVMVTAGANQAFVNIVLTLCDAGD 114
           Y    G+PEL   L +   + +               + VT+G+ Q    +   + + GD
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----------TKPT 164
           +V++  P Y  +  S    G   I V       + PD+  L   L            K T
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINV-ASDESGIVPDS--LRDILSRWKPEDAKNPQKNT 190

Query: 165 PKLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-----KHC 217
           PK +  V N  NP+G +   ER  K I +L +     ++ D+ Y +  ++          
Sbjct: 191 PKFLYTVPNGNNPTGNSLTSER-KKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSM 249

Query: 218 CVEGDHVVNLFSFSK--AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 275
            V+G  V+   SFSK  + G+   R+G++  P  +     +++       +  S  +Q +
Sbjct: 250 DVDG-RVIRADSFSKIISSGL---RIGFLTGPKPL---IERVILHIQVSTLHPSTFNQLM 302

Query: 276 ALYSLQTG-----PEWVTERVKDLVRNREIIREALSP-LGEGAV----KGGEGAIYLWAR 325
               L           V   +      ++ I  A    L   A       G   ++LW +
Sbjct: 303 ISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAG---MFLWIK 359

Query: 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----GCRGHLRISFGGLVEDDCKAAADRLR 380
           +     D  E++   A + GV+++PG A          +LR SF     +    A   L 
Sbjct: 360 VKG-INDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLA 418

Query: 381 RGLEE 385
           + ++E
Sbjct: 419 QLIKE 423

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score =  119 bits (299), Expect = 5e-30
 Identities = 54/374 (14%), Positives = 111/374 (29%), Gaps = 62/374 (16%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT--------------L 109
           YG  +G+ ++R      L    +     V+    ++   +  V++               
Sbjct: 74  YGGLDGIVDIRQIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWS 129

Query: 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
            +     +   P Y   +   +  G   I V P +      DA  +E+ ++      +  
Sbjct: 130 KEETVKWICPVPGYDRHFSITERFGFEMISV-PMNEDGPDMDA--VEELVKNPQVKGMWV 186

Query: 170 VVNPGNPSG-TYIPERLLKRISDLCKAA-GSWLVVDNTYEYFMYDGRKHCCV-------- 219
           V    NP+G T   +   KR+S +  AA    +V DN Y            +        
Sbjct: 187 VPVFSNPTGFTVTEDV-AKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEA 245

Query: 220 --EGDHVVNLFSFSKAYGMM--GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 275
               +      S SK   +   G  V +    +E   + T    ++    I  + ++Q  
Sbjct: 246 AGNPNRFWAFTSTSK---ITLAGAGVSFFLTSAENRKWYTGHAGIRG---IGPNKVNQLA 299

Query: 276 ALYSLQTGPEWVT--ERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPE 328
                           +    +  +     EI+   L+  G        G  ++   +  
Sbjct: 300 HARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP 359

Query: 329 KHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGGLVEDDCKAAADRLRRG 382
                  V   LA   G+ +   G+           +LR++      ++ + A D +   
Sbjct: 360 G--TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVA-- 414

Query: 383 LEELVKDGMVQEHV 396
               V     + + 
Sbjct: 415 --TCVLLAAAEHYA 426

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score =  112 bits (283), Expect = 4e-28
 Identities = 66/310 (21%), Positives = 116/310 (37%), Gaps = 38/310 (12%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           +     + +   +       +    V+V+ GA++    ++   C+ G   +++ P  +  
Sbjct: 57  ECQPKAVIENYAQYAG----VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGM 112

Query: 127 Y-MSFQMTGVTHILVGPCSSKTLHP-DADW---LEKTLETKPTPKLVSVVNPGNPSGTYI 181
           Y +S +  GV    V         P   +W   L+   +     K+V V +P NP+G  I
Sbjct: 113 YSVSAETIGVECRTV---------PTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLI 163

Query: 182 PERLLKRISDLCKAAGSWLVV-DNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239
             +  + +  L    G  +VV D  Y E+           E  H+  L + SKA+ + G 
Sbjct: 164 NPQDFRTL--LELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGL 221

Query: 240 RVGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQ-TGPEWVTERVKDLVR 296
           R G+     EV      L+KV     +    S     +A  +L   G   + ERV  ++ 
Sbjct: 222 RCGFTLANEEV---INLLMKVIAPYPL----STPVADIAAQALSPQGIVAMRERVAQIIA 274

Query: 297 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG 355
            RE +  AL  +            Y+ AR          V + L  + G+++        
Sbjct: 275 EREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSLWDQ-GIILRDQNKQPS 329

Query: 356 CRGHLRISFG 365
             G LRI+ G
Sbjct: 330 LSGCLRITVG 339

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score =  111 bits (281), Expect = 7e-28
 Identities = 62/359 (17%), Positives = 120/359 (33%), Gaps = 44/359 (12%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
               A    ++ V     ++Y A   +  L + L         +   S+++TAG+++   
Sbjct: 30  MSPKAQAAARDAV--VKANRY-AKNEILMLGNKLAAHHQ----VEAPSILLTAGSSEGIR 82

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
             +         +V+     +     F ++ G+    V          D + L+  +   
Sbjct: 83  AAIEAYASLEAQLVIPELT-YGDGEHFAKIAGMKVTKV-KMLDNWAF-DIEGLKAAVAAY 139

Query: 163 PTPKLVSVVNPGNPSGTYIP----ERLLKRISDLCKAAGSWLVVDNTY-EYF----MYDG 213
             P +V +VNP NP+GT  P    E  +              +VD  Y E+         
Sbjct: 140 SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANT-----MFIVDEAYAEFVNDPRFRSI 194

Query: 214 RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQ 273
                   ++++ L +FSK + M G RVGY      V      + +         +    
Sbjct: 195 SPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTV---IALMGRYVA--GEKINFSGV 249

Query: 274 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333
             AL S+     ++T   K    +R+I+ +AL  L    +       +++ +L       
Sbjct: 250 DAALASMN-DSAFITYSKKSNDVSRQILLKALEDLKLPYLPS--EGNFVFHQLVV---PL 303

Query: 334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMV 392
            +    +A   GV++            RIS G     +       +   + E  K   +
Sbjct: 304 KDYQTHMA-DAGVLIGRAFP-PADNWCRISLG--TPQEM----QWVADTMREFRKKSWI 354

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score =  110 bits (276), Expect = 7e-27
 Identities = 50/355 (14%), Positives = 108/355 (30%), Gaps = 54/355 (15%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT--------------L 109
           YG   G+ ++R+   + L          V+   G++   +  +++               
Sbjct: 72  YGGLLGIADIRELWAEALGLP----ADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWS 127

Query: 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
            +     +   P Y   +   +  G   I V P + +        + + ++      + +
Sbjct: 128 AEEKVKWLCPVPGYDRHFTITEHFGFEMINV-PMTDEGPDMGV--VRELVKDPQVKGMWT 184

Query: 170 VVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVV-DNTYEYFMYDGRKHCCVE------- 220
           V   GNP+G T+  +   + ++++  AA  + +V DN Y                     
Sbjct: 185 VPVFGNPTGVTFSEQT-CRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQA 243

Query: 221 ---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL 277
               +    + S SK     G  V + A   E   +      V+    I  + ++Q    
Sbjct: 244 AGNPNRFWFMSSTSKIT-HAGSGVSFFASSKENIEWYASHANVRG---IGPNKLNQLAHA 299

Query: 278 YSLQTGPEWVT--ERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPEKH 330
                         +    +  +     EI+   LS  G        G  ++   +    
Sbjct: 300 QFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG- 358

Query: 331 LDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGGLVEDDCKAAADRL 379
                VV  LA   G+ +   G+           ++R++       + + A D  
Sbjct: 359 -TASRVVE-LAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGF 411

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score =  108 bits (271), Expect = 2e-26
 Identities = 61/361 (16%), Positives = 142/361 (39%), Gaps = 55/361 (15%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
            P  A+E +++         Y  D+ + EL+  L +K      +   ++++ AG++Q   
Sbjct: 44  TPPKAIECLRQNA--NKAHLY-PDDSMIELKSTLAQKYK----VQNENIIIGAGSDQVIE 96

Query: 104 NIVLTLCDAGDSVVM----FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
             + +  ++ ++ +     FA Y   +    +  G           +++  + D  +K  
Sbjct: 97  FAIHSKLNSKNAFLQAGVTFAMYEIYA----KQCGAKCYKT-----QSITHNLDEFKKLY 147

Query: 160 ET-KPTPKLVSVVNPGNPSGTYIP----ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
           ET K   KL+ +  P NP G  +        +K +++ C      +V+D  Y  F     
Sbjct: 148 ETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDC-----LVVIDAAYNEFASFKD 202

Query: 215 KHCCVEG-------DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267
               +E        D+V+ L +FSK YG+ G R+GY    + +    +   K+    P  
Sbjct: 203 SKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANI---ISAFYKL--RAPFN 257

Query: 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 327
            S ++   A+ ++    E+  + +++     E+ +E         +       ++     
Sbjct: 258 VSNLALKAAVAAMD-DDEFTEKTLENNFSQMELYKEFAKKHNIKIIDS--YTNFITYFFD 314

Query: 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387
           EK  +  ++   L  + G+++    + G    +RI+ G     +     ++     ++++
Sbjct: 315 EK--NSTDLSEKLL-KKGIIIRNLKSYGL-NAIRITIG--TSYEN----EKFFTEFDKIL 364

Query: 388 K 388
           +
Sbjct: 365 R 365

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score =  108 bits (271), Expect = 2e-26
 Identities = 62/334 (18%), Positives = 109/334 (32%), Gaps = 44/334 (13%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
             K                 Y  D     LR  +         L +  ++ TAG ++   
Sbjct: 46  TSKKVAAIQANSS--VETEIY-PDGWASSLRKEVADFYQ----LEEEELIFTAGVDELIE 98

Query: 104 NIVLTLCDAGDSVVM----FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
            +   L D   + VM    F  Y  N+     + G     + P      H     L    
Sbjct: 99  LLTRVLLDTTTNTVMATPTFVQYRQNA----LIEGAEVREI-PLLQDGEHDLEGMLNAI- 152

Query: 160 ETKPTPKLVSVVNPGNPSGTYIP----ERLLKRISDLCKAAGSWLVVDNTYEYFM----Y 211
                  +V + NP NP+G YI     +  L R+          +V+D  Y  ++     
Sbjct: 153 --DEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDV-----LVVLDEAYIEYVTPQPE 205

Query: 212 DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASII 271
              K       +++   +FSK YG+   RVGY     E+     QL  V+   P   + I
Sbjct: 206 KHEKLV-RTYKNLIITRTFSKIYGLASARVGYGIADKEI---IRQLNIVR--PPFNTTSI 259

Query: 272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL 331
            Q LA+ +++    ++ E         +          +  +       ++   L     
Sbjct: 260 GQKLAIEAIK-DQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI--- 314

Query: 332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 365
           +   +  +L  ++G +   G A G    +RI+ G
Sbjct: 315 EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG 347

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score =  104 bits (262), Expect = 2e-25
 Identities = 75/384 (19%), Positives = 129/384 (33%), Gaps = 63/384 (16%)

Query: 16  MPIMVQIQELVRGAKNAVSLAQ-----GVVYWQPPKMAMEKVKELVWDPSISKYGADEGL 70
           M +   +   VR A  AV LA                    +        I++Y   +  
Sbjct: 2   MSVGEAMDTEVRAAAQAVCLAFNENPEA-----VEPRVQAAIAAAA--ARINRY-PFDAE 53

Query: 71  PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MS 129
           P +   L +  +      + ++M+  G ++ F  I           V  A   F+ Y   
Sbjct: 54  PRVMRKLAEHFS----CPEDNLMLVRGIDECFDRISAEFS--SMRFV-TAWPGFDGYRAR 106

Query: 130 FQMTGVTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIP---- 182
             ++G+ H  +G           D         +       V + NP NP+G  +     
Sbjct: 107 IAVSGLRHFEIGL--------TDDLLLDPNDLAQVSRD-DCVVLANPSNPTGQALSAGEL 157

Query: 183 ERLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV 241
           ++L +R   L        ++D TY +Y     R      G++ +   SFSK+YG+ G R+
Sbjct: 158 DQLRQRAGKL--------LIDETYVDY--SSFRARGLAYGENELVFRSFSKSYGLAGLRL 207

Query: 242 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301
           G +  PSE+      + + Q         +  H    +L          +   +  R  +
Sbjct: 208 GALFGPSEL---IAAMKRKQW--FCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRV 261

Query: 302 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLR 361
            +AL  LG         A ++              +R+L  R G+ V   G  G   H+R
Sbjct: 262 ADALRGLGYRVASS--EANFVLVENA----AGERTLRFLRER-GIQVKDAGQFGLHHHIR 314

Query: 362 ISFGGLVEDDCKAAADRLRRGLEE 385
           IS G   E+D       L    + 
Sbjct: 315 ISIG--REEDNDRLLAALAEYSDH 336

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score =  103 bits (260), Expect = 7e-25
 Identities = 70/379 (18%), Positives = 126/379 (33%), Gaps = 84/379 (22%)

Query: 44  PPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN 99
           P +  +  +   V      +++Y  +    ELRD L   + ++    + + ++    G+N
Sbjct: 44  PSEALVADLVATVDKIATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSN 102

Query: 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHP-DADW 154
           +    ++      G + + F P    SY    +  + T    I V            AD+
Sbjct: 103 EILQQLLQAFGGPGRTALGFQP----SYSMHPILAKGTHTEFIAV---------SRGADF 149

Query: 155 ---LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209
              ++  LE      P +V V  P NP+G       ++RI      A   ++VD  Y  F
Sbjct: 150 RIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERI---INVAPGIVIVDEAYAEF 206

Query: 210 MYDG------RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD- 262
                      K+       +V   + SKA+   G R+GY             ++ V+  
Sbjct: 207 SPSPSATTLLEKY----PTKLVVSRTMSKAFDFAGGRLGYFVANPAF---IDAVMLVRLP 259

Query: 263 -NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA--------- 312
            ++    S +SQ  A+ +L+         V+ L   R  +   L  LG            
Sbjct: 260 YHL----SALSQAAAIVALR-HSADTLGTVEKLSVERVRVAARLEELGYAVVPSESNFVF 314

Query: 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC 372
                     W    +                GV++      G  GHLR + G  V ++ 
Sbjct: 315 FGDFSDQHAAWQAFLD---------------RGVLIRD---VGIAGHLRTTIG--VPEEN 354

Query: 373 KAAADRLRRGLEELVKDGM 391
               D       E++K  +
Sbjct: 355 ----DAFLDAAAEIIKLNL 369

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  103 bits (259), Expect = 9e-25
 Identities = 59/353 (16%), Positives = 116/353 (32%), Gaps = 40/353 (11%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
            P      + + +    I +Y  D     L  AL +       +  S ++   G  ++  
Sbjct: 38  MPVSVKRALIDNL--DCIERY-PDADYFHLHQALARHHQ----VPASWILAGNGETESIF 90

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
            +   L       ++  P  F  Y  +   +G          +         LE      
Sbjct: 91  TVASGL--KPRRAMIVTPG-FAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPD- 146

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVE 220
                + +  P NP+G      LL+ I+D CK+    L++D  +  F+           +
Sbjct: 147 --LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKD 204

Query: 221 GDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQD--NIPICASIISQHLAL 277
             H+  L S +K Y + G R+GY +      +    ++ + Q   ++    + ++     
Sbjct: 205 NPHIWVLRSLTKFYAIPGLRLGYLVNSD---DAAMARMRRQQMPWSV----NALAALAGE 257

Query: 278 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 337
            +LQ    W       L        +AL  L    V  G  A YL  R      +D ++ 
Sbjct: 258 VALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER---EDIDLQ 312

Query: 338 RWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
           R L     +++            + R++     ++      +RL   L  ++ 
Sbjct: 313 RRLL-TQRILIRSCANYPGLDSRYYRVAIRSAAQN------ERLLAALRNVLT 358

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 99.5 bits (249), Expect = 1e-23
 Identities = 62/359 (17%), Positives = 119/359 (33%), Gaps = 47/359 (13%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
                 + + E +    I  Y  +     LR  L K+ +    +  ++++VT G   AF 
Sbjct: 29  DKDHLEKHLVENL--NCIRHY-PEPDAGTLRQMLAKRNS----VDNNAILVTNGPTAAFY 81

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
            I       G   ++  P  F  Y  + +M                  + D  E      
Sbjct: 82  QIAQAF--RGSRSLIAIPS-FAEYEDACRMYEHEVCFY--------PSNEDIGEADFSN- 129

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM--YDGRKHCCVE 220
                  + NP NP G  +    + R+  L     +  V+D +Y  F      R      
Sbjct: 130 --MDFCWLCNPNNPDGRLLQRTEILRL--LNDHPDTTFVLDQSYVSFTTEEVIRPADIKG 185

Query: 221 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALY 278
             ++V ++SFS AYG+ G R+GYI    +      ++        +    + ++   A +
Sbjct: 186 RKNLVMVYSFSHAYGIPGLRIGYIVANKDF---MKRVAAFSTPWAV----NALAIEAAKF 238

Query: 279 SLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVR 338
            L   P   T  ++   RN      AL+ L    V       +   RL +      E+ +
Sbjct: 239 ILI-HPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG--TAAELKK 294

Query: 339 WLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEH 395
           ++   + +++            ++RI+       +         + LE  ++      H
Sbjct: 295 YMLEEYNMLIRDASNFRGLDESYVRITT-QRPAQN-----QLFIKALETFLEKYEGHHH 347

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 98.4 bits (246), Expect = 4e-23
 Identities = 70/366 (19%), Positives = 135/366 (36%), Gaps = 59/366 (16%)

Query: 44  PPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101
           P    ++ + E +     ++  Y       +LR+   +          S +++  G+++ 
Sbjct: 40  PSPEVVKAILEELGPDGAALRIY-PSASSQKLREVAGELYG----FDPSWIIMANGSDEV 94

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGPCSSKTLHPDADWLE 156
             N++      G+ +    P Y     S+     ++ G      G      L  D     
Sbjct: 95  LNNLIRAFAAEGEEIGYVHPSY-----SYYGTLAEVQGARVRTFG------LTGDFRIAG 143

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFMYDG-- 213
                +   K+  +  P  P G   P   L+ I +L +     LV+D TY E+   +   
Sbjct: 144 FPERYEG--KVFFLTTPNAPLGPSFP---LEYIDELARRCAGMLVLDETYAEFAESNALE 198

Query: 214 --RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--NIPICAS 269
             R+H     ++VV   + SK+Y + G R+G      EV      L K++D  N+     
Sbjct: 199 LVRRH-----ENVVVTRTLSKSYSLAGMRIGLAIARPEV---IAALDKIRDHYNL----D 246

Query: 270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 329
            ++Q   + +L+    +++E  + +   RE     L  +G   +       YL+A  P++
Sbjct: 247 RLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRSIGYDVIPS--QGNYLFATPPDR 303

Query: 330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389
             D   V   L  R  V+V           +RIS G    ++     ++    L+E+ + 
Sbjct: 304 --DGKRVYDGLYAR-KVLVRHFSDPLLAHGMRISIG--TREEM----EQTLAALKEIGEG 354

Query: 390 GMVQEH 395
                H
Sbjct: 355 HHHHHH 360

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 98.0 bits (245), Expect = 6e-23
 Identities = 66/374 (17%), Positives = 134/374 (35%), Gaps = 78/374 (20%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN---QENKLYKSSVMVTAGANQ 100
            P     ++   + + ++++Y        LR  L + +             V++  G+++
Sbjct: 44  LPPALRSELAARLGEVALNRY-PVPSSEALRAKLKEVMQVPAGME------VLLGNGSDE 96

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHP-DADW- 154
               + L     G  V+   P     +    MS Q  G+  + V         P  AD+ 
Sbjct: 97  IISMLALAAARPGAKVMAPVP----GFVMYAMSAQFAGLEFVGV---------PLRADFT 143

Query: 155 --LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW--LVVDNTY-E 207
                 L    +  P +V +  P NP+G       ++ I    + +     +VVD  Y  
Sbjct: 144 LDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP 203

Query: 208 Y----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD- 262
           +    +M            +++ + + SK  G+ G R+GY+A   +      QL KV+  
Sbjct: 204 FAQESWMSRLTDF-----GNLLVMRTVSK-LGLAGIRLGYVAGDPQW---LEQLDKVRPP 254

Query: 263 -NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---- 317
            N+    +++++  AL++L+     + E+   L   R  + E ++     A  G      
Sbjct: 255 YNV----NVLTEATALFALE-HVAVLDEQAAQLRAERSRVAEGMA-----AHGGVTVFPS 304

Query: 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAA 375
            A +L AR+P+      +    L  R  V++             LR++     E+     
Sbjct: 305 AANFLLARVPDAA----QTFDRLLAR-KVLIKNVSKMHPLLANCLRVTVSTPEEN----- 354

Query: 376 ADRLRRGLEELVKD 389
             +        ++D
Sbjct: 355 -AQFLEAFAASLQD 367

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 97.2 bits (243), Expect = 9e-23
 Identities = 55/367 (14%), Positives = 124/367 (33%), Gaps = 67/367 (18%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
            PK  +  + E +   ++  Y  D     L  ++   L     L    +++  GA++   
Sbjct: 40  IPKSFLNNIDEGI--KNLGVY-PDVNYRRLNKSIENYLK----LKDIGIVLGNGASE--- 89

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADW---LEKTLE 160
            I+       + +++  P       S+    +     G  S    + D +     E  + 
Sbjct: 90  -IIELSISLFEKILIIVP-------SYAEYEINAKKHG-VSVVFSYLDENMCIDYEDIIS 140

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HC 217
                  V + NP NP+G  I +     +  L +     +++D  +  F  D        
Sbjct: 141 KIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGE 200

Query: 218 CVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQD--NIPICASIISQH 274
                 +  + + +K + M G R GY I    E+   A ++   Q+  NI    +  ++ 
Sbjct: 201 IKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEI---AAKIKAKQNPWNI----NCFAEM 253

Query: 275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-----------VK-GGEGAIYL 322
            A+  L+    ++ E +  + + R+   E L+ +G               +        L
Sbjct: 254 AAINCLK-DTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKL 312

Query: 323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382
           +  L ++ +    V+R   +  G+             +R +     ++       +  R 
Sbjct: 313 YDSLLKEDI----VIRRCCNFIGL---------DDSFVRFAIKDEKKN------TKFLRA 353

Query: 383 LEELVKD 389
           L+ +  +
Sbjct: 354 LKGVENN 360

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 87.6 bits (218), Expect = 2e-19
 Identities = 78/387 (20%), Positives = 151/387 (39%), Gaps = 72/387 (18%)

Query: 19  MVQIQELVRGAKNAVSLAQGVVY-------WQPPKMAMEKVKELVWDPSISKYGADEGLP 71
           M  +  + + A    +  +   Y       +  P+  +++V   +   ++  Y  D    
Sbjct: 1   MNPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIY-YDSPDE 59

Query: 72  ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF- 130
           EL + ++  L+ +  L K++V V  GA++    I+  +    D  V F P Y     S  
Sbjct: 60  ELIEKILSYLDTDF-LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-----SCY 109

Query: 131 ----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
               +  G   + V P     L  D    E          +V + NP NP+G       +
Sbjct: 110 RIFAKAVGAKFLEV-P-----LTKDLRIPE---VNVGEGDVVFIPNPNNPTGHVFEREEI 160

Query: 187 KRISDLCKAAGSWLVVDNTY-EY----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV 241
           +RI       G+++ +D  Y E+    ++   +K+     +++  + +FSKA+ +   RV
Sbjct: 161 ERILK----TGAFVALDEAYYEFHGESYVDFLKKY-----ENLAVIRTFSKAFSLAAQRV 211

Query: 242 GYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
           GY+    +         +V+   N+    S +SQ  A  +L    E   ER K +V  RE
Sbjct: 212 GYVVASEKF---IDAYNRVRLPFNV----SYVSQMFAKVALD-HREIFEERTKFIVEERE 263

Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
            ++ AL  +G           +++  + ++  +   ++  L  +  V V        R  
Sbjct: 264 RMKSALREMGYRITD--SRGNFVFVFMEKE--EKERLLEHLRTK-NVAVRS-----FREG 313

Query: 360 LRISFGGLVEDDCKAAADRLRRGLEEL 386
           +RI+ G    ++     D + R LE  
Sbjct: 314 VRITIG--KREEN----DMILRELEVF 334

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 69.9 bits (172), Expect = 3e-13
 Identities = 70/391 (17%), Positives = 139/391 (35%), Gaps = 80/391 (20%)

Query: 57  WDPSISKYGADEGLP------------ELRDALVKKLNQ---------ENKLY------- 88
           WD    ++G  + LP             + +AL ++L            ++         
Sbjct: 18  WDYVADRFGTADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWF 77

Query: 89  ---------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHIL 139
                      +V+           ++    + G+ VV+  P Y   Y + +    T + 
Sbjct: 78  STQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMP 137

Query: 140 VGPCSSKTLHPDA-----DW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LK 187
           V       L   A     D   LE  L  KP  K++ + +P NP+G     ++     L+
Sbjct: 138 V------ALEKQADGWFCDMGKLEAVL-AKPECKIMLLCSPQNPTG-----KVWTCDELE 185

Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYI 244
            ++DLC+  G  ++ D  +   ++  + H     V       L S SK++ +      Y 
Sbjct: 186 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYG 245

Query: 245 AYPSEV--EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302
              +    + + +  LK +D +    S+++    + + Q G  W+      L  N   I 
Sbjct: 246 IIENSSSRDAYLSA-LKGRDGLSSP-SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIA 303

Query: 303 EALSPLGEGA-VKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRG 358
           + ++        +  +   YL W  L   ++DD  + + L  +  V ++PG   G   RG
Sbjct: 304 DKMNAAFPELNWQIPQST-YLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRG 362

Query: 359 HLRISFG---GLVEDDCKAAADRLRRGLEEL 386
            +R++ G     +E         L   +  +
Sbjct: 363 FVRLNAGCPRSKLEK----GVAGLINAIRAV 389

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 66.0 bits (162), Expect = 5e-12
 Identities = 49/311 (15%), Positives = 106/311 (34%), Gaps = 30/311 (9%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
              +       +     +     A   V++  P Y   +     T    I +      T 
Sbjct: 81  PEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFID----ATG 136

Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208
             +   +EK    +   + + + NP NP G       L  + DL     + ++VD  +  
Sbjct: 137 GINLHDVEKGF--QAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAP 194

Query: 209 FMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263
            ++DG+               + + + SKA+ + G +   I + +     A    ++   
Sbjct: 195 LVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN--PSDAEHWQQLSPV 252

Query: 264 IPICASIISQ--HLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPLGEGAVKGGEGAI 320
           I   AS +      A Y  + G +++ + V  L  N + +   +   +    +   +   
Sbjct: 253 IKDGASTLGLIAAEAAY--RYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQAT- 309

Query: 321 YL-WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFG---GLVEDDCKA 374
           YL W    +  ++      +   +  V +  G   G    G  R++F     ++E+    
Sbjct: 310 YLMWIDFRDTTIEG-SPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEE---- 364

Query: 375 AADRLRRGLEE 385
           A DR+ + +  
Sbjct: 365 AIDRMAKAVSH 375

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 64.1 bits (157), Expect = 2e-11
 Identities = 60/322 (18%), Positives = 114/322 (35%), Gaps = 44/322 (13%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           K  ++   G   A    +    + GD+V++ +P Y+    + ++     ++         
Sbjct: 119 KEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDH-RLVENSLQIING 177

Query: 149 HPDADW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAAGSWLV 201
             + D+  LEK +      K+  + +P NP G     R+     L +I++LCK  G  LV
Sbjct: 178 RFEIDFEQLEKDI-IDNNVKIYLLCSPHNPGG-----RVWDNDDLIKIAELCKKHGVILV 231

Query: 202 VDNTYEY---FMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV-- 250
            D   E        G  H           D  + L S +K + + G +  +    +E   
Sbjct: 232 SD---EIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLR 288

Query: 251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE 310
             F  + L    +       +       + Q G  W+ E    +  N +++ + L    +
Sbjct: 289 RKFQYRQLANNQHEV---PTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTK 345

Query: 311 GAVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFG- 365
             V   EG  YL W       +   ++   L +   VV+  G   G  G +   R++   
Sbjct: 346 IKVMEPEGT-YLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEG-KYFARLNVAT 403

Query: 366 --GLVEDDCKAAADRLRRGLEE 385
               V++    A  R+     +
Sbjct: 404 PKNTVQE----ALSRIISVFGK 421

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 63.7 bits (156), Expect = 3e-11
 Identities = 60/325 (18%), Positives = 114/325 (35%), Gaps = 47/325 (14%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG---VTHILVGPCSS 145
              ++ TAG   A  N V      GD V++  P Y+  +M+ +      +   L+     
Sbjct: 89  TDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELL--EKD 146

Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAAGSWL 200
                D   LEK  +     K +   +P NP G     R+     L++I D+   +   L
Sbjct: 147 GYYTIDFQKLEKLSKD-KNNKALLFCSPHNPVG-----RVWKKDELQKIKDIVLKSDLML 200

Query: 201 VVDNTYEY---FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV- 250
             D   E     +  G +H           D  +   + SK + + G  +  I   +   
Sbjct: 201 WSD---EIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI 257

Query: 251 -EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPL 308
            E F               + +         +   +W+   +K + +N+ I+++      
Sbjct: 258 RERFTKSRDATSGMPF---TTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNH 314

Query: 309 GEGAVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISF 364
            E      EG  YL W       +D   +  ++ H+  +    G   G  G  G  RI+ 
Sbjct: 315 PEIKAPLIEGT-YLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGG-IGFERINL 372

Query: 365 G---GLVEDDCKAAADRLRRGLEEL 386
                ++++    + +RL + L++L
Sbjct: 373 AAPSSVIQE----SLERLNKALKDL 393

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 61.7 bits (151), Expect = 1e-10
 Identities = 65/329 (19%), Positives = 117/329 (35%), Gaps = 55/329 (16%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           +   +  +G   A   +V      GD +++  P Y   Y   +  G   I         L
Sbjct: 85  EDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS------DL 138

Query: 149 HPDA-----DW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAA 196
             +      +W  LE+ L T P+ +++   NP NP G            +KRI++LC   
Sbjct: 139 IYENSKYSVNWADLEEKLAT-PSVRMMVFCNPHNPIG-----YAWSEEEVKRIAELCAKH 192

Query: 197 GSWLVVDNTYEY---FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYP 247
              L+ D   E     +                 + VV+L S SK + +          P
Sbjct: 193 QVLLISD---EIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIP 249

Query: 248 SEV--EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
           +                  P   ++++   A+ + + G +W+ E  + L  N    RE L
Sbjct: 250 NPDLRARAEESFFLAGIGEP---NLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFL 306

Query: 306 -SPLGEGAVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHL 360
              + E  V     + YL W  +    ++  +  ++L  + G+++  G      G    +
Sbjct: 307 AKEVPEVKVLDSNAS-YLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNG-HEFV 364

Query: 361 RISFG---GLVEDDCKAAADRLRRGLEEL 386
           RI+      LV D       RL++G+  L
Sbjct: 365 RINLACPKELVID----GMQRLKQGVLNL 389

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 76/386 (19%)

Query: 57  WDPSISKYGADEGLP------------ELRDALVKKLNQE--------NKLY-------- 88
           W     KYG ++ LP             + D+L  +L QE        +           
Sbjct: 22  WSEMEKKYGTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLY 81

Query: 89  --------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILV 140
                      ++ + G   A   ++  L  A D +++  P Y       +      I+ 
Sbjct: 82  RRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS 141

Query: 141 GPCSSKTLHPDADW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLC 193
                +  +   D+  +E  ++     KL  + NP NP G     R+     LK++ D+C
Sbjct: 142 PLQKLENGNYIMDYEDIENKIK---DVKLFILCNPHNPVG-----RVWTKDELKKLGDIC 193

Query: 194 KAAGSWLVVDNTYEYFMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYP 247
                 ++ D  +   +    KH  +         + +   + +K + + G +  Y+  P
Sbjct: 194 LKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLP 253

Query: 248 SEV--EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
            E   +       ++        +  S      S   G  W+   ++ L  N +   + +
Sbjct: 254 DEKDYKLLDDAFTRIDIKRN---NCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYI 310

Query: 306 -SPLGEGAVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHL 360
              + +  V+  EG  YL W       L D E+   L  +  V +  G   G  G  G+ 
Sbjct: 311 NENMPKLKVRKPEGT-YLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGG-SGYQ 368

Query: 361 RISFG---GLVEDDCKAAADRLRRGL 383
           RI+      ++E+    A  R++  +
Sbjct: 369 RINLACPRSMLEE----ALIRIKNAI 390

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 60.6 bits (148), Expect = 3e-10
 Identities = 63/322 (19%), Positives = 107/322 (33%), Gaps = 45/322 (13%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           K  ++   G   A    +      G++V++ +P Y     S ++     +       +  
Sbjct: 89  KEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSN-SLKEENG 147

Query: 149 HPDADW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAAGSWLV 201
               D+  LE  +  +   KL  + NP NP G     R+     L++I  LC+     LV
Sbjct: 148 LFQIDFEQLENDI-VENDVKLYLLCNPHNPGG-----RVWEREVLEQIGHLCQKHHVILV 201

Query: 202 VDNTYEY---FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV-- 250
            D   E        G +H           D  + L S +K + + G +  Y    +    
Sbjct: 202 SD---EIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLC 258

Query: 251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPLG 309
             F  Q L    +     S +       + + G  W+      L  N +   E       
Sbjct: 259 AQFKHQQLVNNHHEV---SSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAP 315

Query: 310 EGAVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFG 365
              V   +G  YL W    +  L D  +   L  +  V++  G   G+ G   H R++  
Sbjct: 316 RLKVMKPQGT-YLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEG-ELHARLNIA 373

Query: 366 ---GLVEDDCKAAADRLRRGLE 384
               LVE+       R+   L 
Sbjct: 374 APKSLVEE----ICKRIVCCLP 391

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A* Length = 445

 Score = 47.6 bits (114), Expect = 4e-06
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 25/115 (21%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLE 156
           A   ++L L  AG  +V     Y  + +  +      G+T  ++ P        D   LE
Sbjct: 141 ASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-------DVGALE 193

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTY 206
             L  +    L    +P NP         L+      +S LC   G+ + +D T+
Sbjct: 194 LAL-NQKKVNLFFTESPTNP--------FLRCVDIELVSKLCHEKGALVCIDGTF 239

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis} Length = 414

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLET 161
           +  L  AGD +V     + + ++         GV  + V          D    E+ L  
Sbjct: 113 LGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG-------DDLSQWERAL-- 163

Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               + V    P NP  + +    +  +++L  AAG+ +V+DN +
Sbjct: 164 SVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVF 205

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A* Length = 398

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 16/105 (15%)

Query: 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLET 161
           +LTLC  GD +V  +  Y  ++     +    G+    V            + +   +  
Sbjct: 96  LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAM-- 146

Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
           +P  K+V +  P NP+ + +    ++ ++ +    G+ LVVDNT+
Sbjct: 147 RPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTF 188

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A* Length = 398

 Score = 43.7 bits (104), Expect = 7e-05
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 16/106 (15%)

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLE 160
            + TL   GD V++    Y  ++          GV    V          D   LE  + 
Sbjct: 96  TLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-------DLQALEAAM- 147

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
             P  +++   +P NP+        +  ++ + +  G+ +VVDNTY
Sbjct: 148 -TPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTY 189

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} PDB: 3e6g_A* 3nnp_A* Length = 400

 Score = 43.3 bits (103), Expect = 8e-05
 Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADW 154
           A  + V+ L DAG  VV     Y      F      +  G+    V          D   
Sbjct: 93  AATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRR-RTAGLDFSFVDLT-------DPAA 144

Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTY 206
            +  +  +   K+V +  P NP        +LK      I+ + +  G   VVDNT+
Sbjct: 145 FKAAI--RADTKMVWIETPTNP--------MLKLVDIAAIAVIARKHGLLTVVDNTF 191

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 20/123 (16%)

Query: 91  SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-------FQMTGVTHILVGPC 143
              VT GA +A   ++ +L      VVM                   +  G+   LV   
Sbjct: 71  VARVTNGAREAKFAVMHSLAKKDAWVVM-------DENCHYSSYVAAERAGLNIALVPKT 123

Query: 144 SSKTLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200
                    +   +T+E         L  +  P    G       +K+I+ +C      L
Sbjct: 124 DYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIAKVCSEYDVPL 180

Query: 201 VVD 203
           +V+
Sbjct: 181 LVN 183

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A* Length = 389

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 26/111 (23%)

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLE 160
             L     GD ++     Y  +   F       G+   L+          D + ++    
Sbjct: 90  STLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTS-------DVEKVKAAW- 141

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTY 206
            KP  K+V + +P NP          K      I+ +C   G+ LVVD T+
Sbjct: 142 -KPNTKMVYLESPANP--------TCKVSDIKGIAVVCHERGARLVVDATF 183

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} PDB: 3qi6_A* Length = 392

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 26/111 (23%)

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLE 160
            +  +   GD VV+    Y  ++           V +  V          D D +   + 
Sbjct: 97  ALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA-------DLDAVRAAI- 148

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTY 206
            +PT +L+ V  P NP        LL       I+ L   + + ++VDNT+
Sbjct: 149 -RPTTRLIWVETPTNP--------LLSIADIAGIAQLGADSSAKVLVDNTF 190

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3 Length = 464

 Score = 40.3 bits (95), Expect = 9e-04
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 33/121 (27%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADW 154
           A ++ V  L   G+ +V     Y       +  +     GV    V            D 
Sbjct: 159 AALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRS--GVVVKRVNTT-------KLDE 209

Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTYEYF 209
           +   +   P  KLV + +P NP          +     +IS++  A G+ ++VDN+    
Sbjct: 210 VAAAI--GPQTKLVWLESPTNP--------RQQISDIRKISEMAHAQGALVLVDNS---I 256

Query: 210 M 210
           M
Sbjct: 257 M 257

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	400
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
1svv_A	359	Threonine aldolase; structural genomics, structura	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	100.0
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	100.0
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	100.0
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
1z7d_A	433	Ornithine aminotransferase; structural genomics co	100.0
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	100.0
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	100.0
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	100.0
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	100.0
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	100.0
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	100.0
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	100.0
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	100.0
3hmu_A	472	Aminotransferase, class III; structural genomics,	100.0
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	100.0
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	100.0
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	100.0
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	100.0
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	100.0
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	100.0
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	100.0
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	100.0
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	100.0
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.98
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.98
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.98
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.97
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.97
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.97
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.97
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.97
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.97
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.97
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.97
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.97
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.97
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.97
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.97
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.97
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.97
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.97
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.97
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.97
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.97
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.97
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.97
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.97
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.97
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.97
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.97
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.97
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.97
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.97
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.97
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.96
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.96
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.96
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.96
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.96
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.96
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.96
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.96
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.96
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.96
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.96
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.96
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.96
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.96
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.96
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.96
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.95
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.95
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.91
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.94
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.94
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.94
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.93
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.93
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.93
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.93
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.93
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.92
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.92
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.92
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.92
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.91
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.91
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.9
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.88
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.87
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.84
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.82
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.79
2yvq_A	143	Carbamoyl-phosphate synthase; conserved hypothetic	80.15

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=3.8e-50  Score=378.90  Aligned_cols=368  Identities=26%  Similarity=0.464  Sum_probs=312.1

Q ss_pred             HHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +++|+.....+.+..+..    ..+.++++|+|+.+++++++++.+.+++.+.+... ...|++..|..++++++++++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~   82 (385)
T 1b5p_A            4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFR   82 (385)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence            567777655554444333    33456889999999999888899999998888664 4568777889999999999999


Q ss_pred             hhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768           83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l  159 (400)
                      +.+|+  ++++|++|+|++++++.++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++.+++.+
T Consensus        83 ~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l  161 (385)
T 1b5p_A           83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV-ETLPEEGFVPDPERVRRAI  161 (385)
T ss_dssp             HTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHTTC
T ss_pred             HHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHHhc
Confidence            88774  57899999999999999999999999999999999999999999999999999 8875 57788999999998


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccCCCcEEEEeccccccCCC
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~  237 (400)
                      ++++  ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++...  .....+++++++|+||.+|++
T Consensus       162 ~~~~--~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~  239 (385)
T 1b5p_A          162 TPRT--KALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT  239 (385)
T ss_dssp             CTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCG
T ss_pred             CCCC--EEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCc
Confidence            7654  999999999999999999999999999999999999999999988754211  111127799999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC---CcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      |+|+||++.+   +++++.+.......+++++.+.+.++..+|+.   +.+++++.++.++++++.+.+.|+++ ++.+.
T Consensus       240 G~RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  315 (385)
T 1b5p_A          240 GWRIGYACGP---KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV  315 (385)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC
T ss_pred             ccceEEEEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence            9999999998   78888888776666678899999999999975   45678888899999999999999988 45777


Q ss_pred             CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      .+.+++++|+.++....+..++..+|. ++||.+.||..|+.++++|||++ .+++++++++++|+++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~-~~~~~i~~~l~~l~~~l~  383 (385)
T 1b5p_A          316 RPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYA-TSEENLRKALERFARVLG  383 (385)
T ss_dssp             CCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHGGGGC-
T ss_pred             CCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEec-CCHHHHHHHHHHHHHHHh
Confidence            788889999998642346788998887 89999999999877889999999 589999999999987764

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=1.1e-48  Score=369.58  Aligned_cols=373  Identities=26%  Similarity=0.435  Sum_probs=321.0

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      |++|+|+.....+.+.++.+..+..+++++|+.+.+++++++.+++++.+.+.+. ...|++..+..++++++++++.+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~   79 (389)
T 1gd9_A            1 MALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ   79 (389)
T ss_dssp             -CHHHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CchhhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHHHHHHHH
Confidence            5688999888888888888877766789999999998888999999999988764 356877778999999999999988


Q ss_pred             cC--CCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc
Q 015768           85 NK--LYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE  160 (400)
Q Consensus        85 ~~--~~~~~-i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~  160 (400)
                      +|  +++++ +++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++.++
T Consensus        80 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~  158 (389)
T 1gd9_A           80 NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYVT  158 (389)
T ss_dssp             HCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEE-ECCGGGTTCCCHHHHHHHCC
T ss_pred             hCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCCccCCCCCHHHHHHhcC
Confidence            77  46788 9999999999999999999999999999999999999999999999999 8775 367789999999997


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccC--CCcEEEEeccccccC
Q 015768          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVE--GDHVVNLFSFSKAYG  235 (400)
Q Consensus       161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~--~~~~i~~~s~sK~~g  235 (400)
                      ++  +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.+   .....  .+++++++|+||.+|
T Consensus       159 ~~--~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  236 (389)
T 1gd9_A          159 DK--TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA  236 (389)
T ss_dssp             TT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT
T ss_pred             cC--ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC
Confidence            64  489999999999999999999999999999999999999999998876531   11111  467899999999998


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAV  313 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~  313 (400)
                      ++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+...+  +++++.++++++++.+.+.|++++ +.+
T Consensus       237 ~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~  312 (389)
T 1gd9_A          237 MTGWRLGFVAAP---SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMG-LPT  312 (389)
T ss_dssp             CGGGCCEEEECC---HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCC
T ss_pred             CcccceEEEEEC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcC-Cee
Confidence            899999999998   78889888877766788899999999999986444  678888999999999999999884 466


Q ss_pred             cCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          314 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..+.+++++|++++....+..++..+|++++||.+.||..|+  .++++||+++. +++++++++++|.+++++.
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~  386 (389)
T 1gd9_A          313 VKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKER  386 (389)
T ss_dssp             CCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence            677778899999874223678888888668999999998886  36899999997 9999999999999998763

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=1e-48  Score=369.61  Aligned_cols=374  Identities=24%  Similarity=0.435  Sum_probs=316.3

Q ss_pred             hhHHHHhhhcCc----hHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEM----PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |++++|+.+...    .......+..++++++++|+.+.++++.|+.+.+++.+.+.+. ...|++..+..+++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~   79 (388)
T 1j32_A            1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQK   79 (388)
T ss_dssp             CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred             CchhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            345666664332    3334444445668899999999998888899999999888664 45687778899999999999


Q ss_pred             HHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768           81 LNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (400)
Q Consensus        81 l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~  157 (400)
                      +.+.+|+  +++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++
T Consensus        80 ~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~  158 (388)
T 1j32_A           80 LQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL-PTTVETQFKVSPEQIRQ  158 (388)
T ss_dssp             HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCGGGTTCCCHHHHHH
T ss_pred             HHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEe-cCCcccCCCCCHHHHHH
Confidence            9988774  57899999999999999999999999999999999999999999999999999 8775 356789999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC---CCcEEEEeccc
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE---GDHVVNLFSFS  231 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~---~~~~i~~~s~s  231 (400)
                      .+++++  ++|++++|+||||.++|.+++++|+++|++||+++|+|++|+.+.+++.+..   ...   .+.++++.|+|
T Consensus       159 ~l~~~~--~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s  236 (388)
T 1j32_A          159 AITPKT--KLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA  236 (388)
T ss_dssp             HCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred             hcCcCc--eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeech
Confidence            997654  9999999999999999999999999999999999999999999887653321   111   35789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.+|++|+|+||++.+   +++++.+.......+++++.+.+.++..+|+...++++++.+++.++++++.+.|++++++
T Consensus       237 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~  313 (388)
T 1j32_A          237 KTYAMTGWRVGFLAGP---VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL  313 (388)
T ss_dssp             TTTTCTTTCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred             hccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            9998899999999998   7888888877766678889999999989998666788889999999999999999998666


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+..+.+++++|+.++....+..++..+|++++||.+.+|..|+.++++|++++. +++++++++++|+++++++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~  387 (388)
T 1j32_A          314 ECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT-DLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             BCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            7777777888998886422367888888875689999999988778999999985 9999999999999998764

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=1.4e-48  Score=369.00  Aligned_cols=361  Identities=23%  Similarity=0.336  Sum_probs=303.2

Q ss_pred             HHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCC
Q 015768           20 VQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAG   97 (400)
Q Consensus        20 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g   97 (400)
                      ....++-++++++|+|+.|.++++.|+++++++.+.+.+. ...|++..|..++++++++++.+.+|  +++++|++|+|
T Consensus        21 ~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g   99 (391)
T 3h14_A           21 EAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETD-ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPG   99 (391)
T ss_dssp             HHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESS
T ss_pred             HHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecC
Confidence            3334445678999999999999998999999999988764 45787778899999999999998887  56899999999


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768           98 ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (400)
Q Consensus        98 ~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~np  176 (400)
                      ++++++.++.++.++||+|+++.|+|+++...++..|++++.+ |.+++ ++.+|++.+++.   +  +++|++++|+||
T Consensus       100 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~---~--~~~v~i~~p~np  173 (391)
T 3h14_A          100 SSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDL-PTAPENRLQPVPADFAGL---D--LAGLMVASPANP  173 (391)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCGGGTTSCCHHHHTTS---C--CSEEEEESSCTT
T ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHhc---C--CeEEEECCCCCC
Confidence            9999999999999999999999999999999999999999999 88754 477899998876   3  499999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      ||.+++.+++++|+++|++||+++|+||+|+.+.+++...... ..+++++++|+||.+|++|+|+||++.+   +++++
T Consensus       174 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~  250 (391)
T 3h14_A          174 TGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVP---EDQVR  250 (391)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECC---GGGHH
T ss_pred             CCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeC---HHHHH
Confidence            9999999999999999999999999999999988766433222 2467899999999999899999999998   67888


Q ss_pred             HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768          256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       256 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (400)
                      .+.......+++++.+.+.++..+++ ..+++.+.++++.++++.+.+.|++++...+..+.+++++|+.++....+..+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (391)
T 3h14_A          251 VVERIAQNMFICAPHASQVAALAALD-CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRA  329 (391)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHH
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHH
Confidence            88877777788899999999988888 56788899999999999999999988775556777789999999764457889


Q ss_pred             HHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhccCcc
Q 015768          336 VVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMV  392 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  392 (400)
                      ++.++++++||.+.||..|+.   ++++|++++. +++++++++++|++++++.......
T Consensus       330 ~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~~~~~~~  388 (391)
T 3h14_A          330 FAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQARGEGHHH  388 (391)
T ss_dssp             HHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhcccccc
Confidence            999888667999999998875   6799999997 8999999999999999987665433

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=2.8e-48  Score=367.56  Aligned_cols=362  Identities=22%  Similarity=0.313  Sum_probs=313.2

Q ss_pred             HHHhhhcCchHHHHHHHHHh-----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            8 AKRALETEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +.++.......+..+.+..+     +++++|+|+.++++++.|+.+++++.+.+..  ...|++..|..++++++++++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~   80 (396)
T 3jtx_A            3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLK   80 (396)
T ss_dssp             HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHH
Confidence            45666666666666655543     4688999999999999999999999998863  6678878889999999999999


Q ss_pred             hhcCC---CCC-cEEEeCChHHHHHHHHHHhcCCC-----CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHH
Q 015768           83 QENKL---YKS-SVMVTAGANQAFVNIVLTLCDAG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD  153 (400)
Q Consensus        83 ~~~~~---~~~-~i~~~~g~t~a~~~~~~~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e  153 (400)
                      +.+|+   +++ +|++|+|+++++..++.++.++|     |+|+++.|+|+++...++..|++++.+ |.+++|+.+|++
T Consensus        81 ~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~g~~~d~~  159 (396)
T 3jtx_A           81 RRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFA-NCPAPSFNPDWR  159 (396)
T ss_dssp             HHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCTTTCCCCGG
T ss_pred             HhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEe-ecCCCCCccCHH
Confidence            98885   478 99999999999999999999997     799999999999999999999999999 888888888999


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC-CCcccc--------CCCcE
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCCV--------EGDHV  224 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~~--------~~~~~  224 (400)
                      .+++.+++++  ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++ .+....        ..+++
T Consensus       160 ~l~~~~~~~~--~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (396)
T 3jtx_A          160 SISEEVWKRT--KLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKL  237 (396)
T ss_dssp             GSCHHHHHTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTE
T ss_pred             HHHHhhccCc--EEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcE
Confidence            9999988754  999999999999999999999999999999999999999999988766 222211        26789


Q ss_pred             EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      +++.|+||.++++|+|+||++.+   +++++.+.......+++++.+.+.++..+++. .+++.+.++.+.++++.+.+.
T Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~  313 (396)
T 3jtx_A          238 LMFTSLSKRSNVPGLRSGFVAGD---AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPI  313 (396)
T ss_dssp             EEEEESTTTSSCGGGCCEEEEEC---HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccccccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998899999999988   88988888877666788999999999999986 678889999999999999999


Q ss_pred             hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--------CCeEEEEeccCCHHHHHHHH
Q 015768          305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA  376 (400)
Q Consensus       305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~  376 (400)
                      |+++  ..+..+.+++++|++++.  .+..+++.+|++++||.+.||..|+.        ++++||+++. +++++++++
T Consensus       314 l~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l  388 (396)
T 3jtx_A          314 LQQV--FDVKLPDASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAA  388 (396)
T ss_dssp             HTTT--SCCCCCSSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHH
T ss_pred             HHhc--CCccCCCeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHH
Confidence            9886  245667779999999986  36788898887778999999998863        5799999997 999999999


Q ss_pred             HHHHHHH
Q 015768          377 DRLRRGL  383 (400)
Q Consensus       377 ~~l~~~l  383 (400)
                      ++|++++
T Consensus       389 ~~l~~~l  395 (396)
T 3jtx_A          389 EDIVSLY  395 (396)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHh
Confidence            9998875

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.3e-48  Score=368.14  Aligned_cols=376  Identities=22%  Similarity=0.340  Sum_probs=302.0

Q ss_pred             hhHHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |.+++++.......+..+..    +..+++++|+|+.+.+++++++.+++++.+.+.+.....|++..+..+++++++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   87 (412)
T 2x5d_A            8 ARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW   87 (412)
T ss_dssp             -------------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred             cchhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence            44666666544333333222    33568899999999998888999999999988764345687778899999999999


Q ss_pred             HHhhcCC--CC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHH
Q 015768           81 LNQENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE  156 (400)
Q Consensus        81 l~~~~~~--~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~  156 (400)
                      +.+.+|+  ++ ++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++ ++.+|++.++
T Consensus        88 ~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~  166 (412)
T 2x5d_A           88 YRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSV-PLVPGIDFFNELERAI  166 (412)
T ss_dssp             HHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEE-ECSTTSCHHHHHHHHH
T ss_pred             HHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHH
Confidence            9888775  56 699999999999999999999999999999999999999999999999999 88765 6667899999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccC--CCcEEEEeccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVE--GDHVVNLFSFS  231 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~--~~~~i~~~s~s  231 (400)
                      +.+++++  ++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+.+..   .....  .+++++++|+|
T Consensus       167 ~~i~~~~--~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~s  244 (412)
T 2x5d_A          167 RESIPKP--RMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLS  244 (412)
T ss_dssp             HTEESCC--SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC
T ss_pred             HhcccCc--eEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCc
Confidence            9987554  99999999999999999999999999999999999999999998875432   11221  46789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |++|++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+...++++++.++++++++.+.+.|++++ +
T Consensus       245 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~  320 (412)
T 2x5d_A          245 KSYNMAGWRIGFMVGN---PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-W  320 (412)
T ss_dssp             -CCSCTTSCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred             cccCCcccceEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence            9998899999999998   78888888776666788899999999999987677888999999999999999999874 4


Q ss_pred             cccCCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          312 AVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .+..+.+++|+|++++...  .+..+++.+|++++||.+.||..|.  .++++||+++. +++++++++++|+++++++.
T Consensus       321 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~  399 (412)
T 2x5d_A          321 MVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADG  399 (412)
T ss_dssp             CCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence            6667777889999997432  1567888888766899999998885  36899999997 89999999999999998754


Q ss_pred             c
Q 015768          388 K  388 (400)
Q Consensus       388 ~  388 (400)
                      .
T Consensus       400 ~  400 (412)
T 2x5d_A          400 L  400 (412)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=1.4e-48  Score=370.32  Aligned_cols=370  Identities=20%  Similarity=0.301  Sum_probs=308.3

Q ss_pred             HHHhhhcCchHHHHHHHHHh--cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc
Q 015768            8 AKRALETEMPIMVQIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN   85 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~   85 (400)
                      ++++.+.....+..+.....  .++++|+|+.+.++++.++.+++++.+.+.+.....|++..+..++++++++++.+.+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~  102 (404)
T 2o1b_A           23 SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQY  102 (404)
T ss_dssp             CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            66666554444444444433  3567999999999888889999999998865334468766789999999999998888


Q ss_pred             CCC--C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768           86 KLY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus        86 ~~~--~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      |++  + ++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++++.+|++.+++.++++
T Consensus       103 g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~  181 (404)
T 2o1b_A          103 NVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPL-NLEPPHYLPDWSKVDSQIIDK  181 (404)
T ss_dssp             CCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEE-ECCTTTCCCCGGGSCHHHHHH
T ss_pred             CCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCcccCcCCHHHHHHhhccC
Confidence            864  4 799999999999999999999999999999999999999999999999999 887777778999999988754


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCCc
Q 015768          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~g  238 (400)
                      +  ++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....  ..  ..+++++++|+||++|++|
T Consensus       182 ~--~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G  259 (404)
T 2o1b_A          182 T--KLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSG  259 (404)
T ss_dssp             E--EEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGG
T ss_pred             c--eEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCch
Confidence            4  9999999999999999999999999999999999999999999887542211  11  1257899999999998899


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +|+||++.+   +++++.+.......+++++.+.+.++..+|+.+.+++++.++.++++++.+.+.|++++ +.+..+.+
T Consensus       260 ~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~  335 (404)
T 2o1b_A          260 FRVGFAVGN---KDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-LPFVHAKG  335 (404)
T ss_dssp             GCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEECCCB
T ss_pred             hheEeEecC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC-CeecCCCc
Confidence            999999988   78888888776666778899999999999987667788889999999999999999885 46777777


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++++|++++.. .+..+++.++++++||.+.||..|+.  ++++||+++. +++++++++++|+++++++
T Consensus       336 g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~  403 (404)
T 2o1b_A          336 GIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYLY  403 (404)
T ss_dssp             SSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGGG
T ss_pred             ceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHhh
Confidence            88999999753 36778888887678999999988863  6899999997 8899999999999887653

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=5.1e-48  Score=368.79  Aligned_cols=372  Identities=22%  Similarity=0.352  Sum_probs=319.4

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHHh
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      +.+++|+.....+.+.++.+... ++++|+|+.|.+++++|+.+++++.+.+.++. ...|++..+..++++++++++.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~   82 (422)
T 3fvs_A            4 QLQARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGE   82 (422)
T ss_dssp             CCSCGGGTTCCCCHHHHHHHHHH-TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhHHHHhhccCccHHHHHHHHhh-cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence            45788888888888888877654 47999999999999999999999999987753 46788778899999999999998


Q ss_pred             hcCCC--C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-----------CCCC
Q 015768           84 ENKLY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-----------KTLH  149 (400)
Q Consensus        84 ~~~~~--~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~  149 (400)
                      .+|++  + ++|++|+|++++++.++.++.++||+|+++.|+|+++...++..|.+++.+ |.++           .++.
T Consensus        83 ~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~G~~~~~~~~~  161 (422)
T 3fvs_A           83 LLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQNGELGSSSNWQ  161 (422)
T ss_dssp             HHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCCCSSSCCBGGGSB
T ss_pred             hhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEE-ecccccccccccccccCCC
Confidence            88754  5 689999999999999999999999999999999999999999999999999 8765           2456


Q ss_pred             CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcE
Q 015768          150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHV  224 (400)
Q Consensus       150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~  224 (400)
                      +|++.+++.+++++  ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++....   ..  ..+++
T Consensus       162 ~d~~~l~~~~~~~~--~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~  239 (422)
T 3fvs_A          162 LDPMELAGKFTSRT--KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERT  239 (422)
T ss_dssp             CCHHHHHTTCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred             CCHHHHHhhcCCCc--eEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcE
Confidence            89999999997654  9999999999999999999999999999999999999999999887654221   11  23678


Q ss_pred             EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-------CcHHHHHHHHHHHHH
Q 015768          225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRN  297 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~  297 (400)
                      +++.|+||.+|++|+|+||++.+   +++++.+.......+++++.+.+.++..+++.       ..++++++.+.++++
T Consensus       240 i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  316 (422)
T 3fvs_A          240 LTIGSAGKTFSATGWKVGWVLGP---DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC  316 (422)
T ss_dssp             EEEEEHHHHHTCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHH
T ss_pred             EEEecchhccCCccceEEEEEeC---HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHH
Confidence            99999999999899999999998   78888888777767888899999999999873       356788899999999


Q ss_pred             HHHHHHHhccCCCCcccCCCCceEEEeeCCCCC---CC---------HHHHHHHHHHhcCeEEeCCCccC-------CCC
Q 015768          298 REIIREALSPLGEGAVKGGEGAIYLWARLPEKH---LD---------DFEVVRWLAHRHGVVVIPGGACG-------CRG  358 (400)
Q Consensus       298 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~l~~~~gi~v~~g~~~~-------~~~  358 (400)
                      ++.+.+.|++++ +.+..+.+++++|++++...   .+         ..+++.++++++||.+.||..|+       ..+
T Consensus       317 ~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~  395 (422)
T 3fvs_A          317 RDHMIRSLQSVG-LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDH  395 (422)
T ss_dssp             HHHHHHHHHTTT-CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCS
T ss_pred             HHHHHHHHHHcC-CeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCC
Confidence            999999999985 47677888999999875310   01         45788888878899999999884       368


Q ss_pred             eEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          359 HLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       359 ~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++||+++. +++++++++++|++++++
T Consensus       396 ~iRis~~~-~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          396 YIRFCFVK-DEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             EEEEECCC-CHHHHHHHHHHHHHHHHC
T ss_pred             eEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence            99999997 999999999999998864

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=1.2e-47  Score=368.17  Aligned_cols=372  Identities=24%  Similarity=0.394  Sum_probs=313.0

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +|+|+.....+...++.+... ++++|+|+.|.++.  .+++++.+++.+.+.+..  ...|++..|..++++++++++.
T Consensus        54 ~s~~~~~~~~s~~~~~~~~~~-~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~  132 (448)
T 3aow_A           54 FSKKALEMRASEVRELLKLVE-TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLG  132 (448)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHH-TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhHHHhcCCCcHHHHHHHhcc-CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHH
Confidence            677777766666666666544 57899999998765  367888888888876531  3578888899999999999998


Q ss_pred             hhcCC-CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-
Q 015768           83 QENKL-YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-  160 (400)
Q Consensus        83 ~~~~~-~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-  160 (400)
                      +.+|+ ++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|++++.+ |.+++|  +|++.|++.++ 
T Consensus       133 ~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~L~~~l~~  209 (448)
T 3aow_A          133 KRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQI-PLDDEG--MKVEILEEKLKE  209 (448)
T ss_dssp             HHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHH
T ss_pred             HhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHHhh
Confidence            88888 78999999999999999999999999999999999999999999999999999 887664  79999999987 


Q ss_pred             ---cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc---ccc-CCCcEEEEecccc
Q 015768          161 ---TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCV-EGDHVVNLFSFSK  232 (400)
Q Consensus       161 ---~~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~-~~~~~i~~~s~sK  232 (400)
                         +...+++|+ +++|+||||.+++.+++++|.++|++||+++|+||+|+.+.+++...   ... ..+++++++|+||
T Consensus       210 ~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK  289 (448)
T 3aow_A          210 LKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK  289 (448)
T ss_dssp             HHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTT
T ss_pred             hhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchh
Confidence               422358875 56899999999999999999999999999999999999988765422   111 2467899999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhcc-CC
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSP-LG  309 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~-~~  309 (400)
                      .+| +|+|+||++++   +++++.+.......+++++.+.+.++..+|+.+  .+++.++++.++++++.+.+.|++ ++
T Consensus       290 ~~~-~GlriG~v~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  365 (448)
T 3aow_A          290 ILA-PGFRIGWMVGD---PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP  365 (448)
T ss_dssp             TTC-GGGCCEEEEEC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hcc-ccccEEEEEeC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            998 99999999998   788888887766556778999999999999875  467788888899999999999987 45


Q ss_pred             -CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          310 -EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       310 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                       ++.+..|.+++|+|++++.. .+..+++.+++ ++||.+.||..|.    .++++|++++..+++++++++++|.++++
T Consensus       366 ~g~~~~~p~~g~~~~v~~~~~-~~~~~l~~~l~-~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~  443 (448)
T 3aow_A          366 EGVKWTKPEGGMFIWVTLPDG-IDSKKMLERAI-KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK  443 (448)
T ss_dssp             TTCEECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred             CCeEEeCCCccEEEEEEcCCC-CCHHHHHHHHH-HCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence             46777788899999999864 36788988887 5699999998884    36799999987679999999999999998


Q ss_pred             HHhc
Q 015768          385 ELVK  388 (400)
Q Consensus       385 ~~~~  388 (400)
                      ++.+
T Consensus       444 ~~~~  447 (448)
T 3aow_A          444 EELK  447 (448)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            8754

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=1.7e-47  Score=360.87  Aligned_cols=365  Identities=24%  Similarity=0.363  Sum_probs=310.7

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      .++|+.....+.+..+.++... +++|+|+.+.+++++++.+.+++.+.+.++ ...|++..+..++++++++++.+.+|
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g   85 (386)
T 1u08_A            8 PQSKLPQLGTTIFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYG   85 (386)
T ss_dssp             CCCSCCCCCCCHHHHHHHHHHH-TTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHS
T ss_pred             cchhhhcCCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            4666666666777776666544 689999999998888999999999988763 45787777899999999999988877


Q ss_pred             --CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768           87 --LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (400)
Q Consensus        87 --~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~  163 (400)
                        ++++ +|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++++.+|++.+++.++++ 
T Consensus        86 ~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~-  163 (386)
T 1u08_A           86 YQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM-ALQPPHFRVDWQEFAALLSER-  163 (386)
T ss_dssp             CCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCTTTCCCCHHHHHHHCCTT-
T ss_pred             CCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-ecCcccCcCCHHHHHHhhccc-
Confidence              4577 99999999999999999999999999999999999999999999999999 887655678999999999754 


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEeccccccCCCc
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK~~g~~g  238 (400)
                       +++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....   ..  ..+++++++|+||.+|++|
T Consensus       164 -~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  242 (386)
T 1u08_A          164 -TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG  242 (386)
T ss_dssp             -EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG
T ss_pred             -CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcc
Confidence             49999999999999999999999999999999999999999999887653221   11  2468999999999999899


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +|+||++.+   +++++.+.......+++.+.+.+.++..+|+...+++++++++++++++.+.+.|++++ +.+..+.+
T Consensus       243 ~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~  318 (386)
T 1u08_A          243 WKVGYCVAP---APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESR-LEILPCEG  318 (386)
T ss_dssp             GCCEEEECC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSS-CEECCCCB
T ss_pred             cceEEEEcC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCc
Confidence            999999998   78888888766555778888999999999986567888899999999999999999885 46777777


Q ss_pred             ceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       319 ~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      ++++|++++... .+..+++.++++++||.+.||..|.    .++++||+++. +++++++++++|++
T Consensus       319 g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~  385 (386)
T 1u08_A          319 TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ  385 (386)
T ss_dssp             SSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred             eEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence            899999997531 2577888888767899999998774    46799999996 89999999998864

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=2.2e-47  Score=361.70  Aligned_cols=370  Identities=22%  Similarity=0.361  Sum_probs=303.9

Q ss_pred             hhHHHHhhhc--CchHHHHHHHHH------hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHH
Q 015768            5 AKLAKRALET--EMPIMVQIQELV------RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPEL   73 (400)
Q Consensus         5 ~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~   73 (400)
                      |.+++|+...  ..+...++.+..      .+++++|+|+.+++++++++.+.+++.+.+.+..   ...|++..|..++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l   81 (398)
T 3ele_A            2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET   81 (398)
T ss_dssp             CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred             cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence            4466777664  333333333221      1357899999999888889999999999887642   4568888899999


Q ss_pred             HHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCC
Q 015768           74 RDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP  150 (400)
Q Consensus        74 ~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  150 (400)
                      ++++++++.+.+|  +++++|++|+|+++++..++.++.++| |+|+++.|+|+++...++..|.+++.+ |.+++++.+
T Consensus        82 r~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~  160 (398)
T 3ele_A           82 RAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEV-PADTEHFQI  160 (398)
T ss_dssp             HHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCTTTSSC
T ss_pred             HHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCCcCCcC
Confidence            9999999998887  568999999999999999999999999 999999999999999999999999999 988777889


Q ss_pred             CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH------cCCEEEEcccccccccCCCCc--cccCCC
Q 015768          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA------AGSWLVVDNTYEYFMYDGRKH--CCVEGD  222 (400)
Q Consensus       151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~------~~~~li~D~a~~~~~~~~~~~--~~~~~~  222 (400)
                      |++++++.+++++  ++|++++|+||||.+++.+++++|+++|++      ||+++|+||+|+.+.+++...  .....+
T Consensus       161 d~~~l~~~l~~~~--~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  238 (398)
T 3ele_A          161 DFDALEERINAHT--RGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYD  238 (398)
T ss_dssp             CHHHHHHTCCTTE--EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCS
T ss_pred             CHHHHHHHhCcCC--CEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcC
Confidence            9999999997654  999999999999999999999999999999      999999999999988865332  223457


Q ss_pred             cEEEEeccccccCCCcceeEEEEccCCcH---HHHHHHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGWRVGYIAYPSEVE---GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~~~G~i~~~~~~~---~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      ++++++|+||.+|++|+|+||++.++...   .+.+.+...... .+.+++.+.+.++..+++...     ..+.+++++
T Consensus       239 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~  313 (398)
T 3ele_A          239 NTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-----DINAYKENR  313 (398)
T ss_dssp             SEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----CHHHHHHHH
T ss_pred             CeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-----HHHHHHHHH
Confidence            88999999999998999999999985321   233444433322 356678888888888877532     355677888


Q ss_pred             HHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHH
Q 015768          299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR  378 (400)
Q Consensus       299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~  378 (400)
                      +++.+.|++++. .+..+.+++++|++++..  +..++.+.| .++||.+.||..|+.++++||+++ .+++++++++++
T Consensus       314 ~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~  388 (398)
T 3ele_A          314 DLLYEGLTRIGY-HCFKPDGAFYMFVKALED--DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPA  388 (398)
T ss_dssp             HHHHHHHHHHTC-CEECCSBSSEEEEECSSS--CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCC-eecCCCeeEEEEEEcCCC--CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHH
Confidence            888888888754 677788889999999753  577888866 589999999999988899999998 599999999999


Q ss_pred             HHHHHHHHh
Q 015768          379 LRRGLEELV  387 (400)
Q Consensus       379 l~~~l~~~~  387 (400)
                      |+++++++.
T Consensus       389 l~~~l~~~~  397 (398)
T 3ele_A          389 FEKIYKKYN  397 (398)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhh
Confidence            999998764

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-47  Score=368.85  Aligned_cols=360  Identities=21%  Similarity=0.383  Sum_probs=305.9

Q ss_pred             cCchHHHHHHHHHh--------cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc
Q 015768           14 TEMPIMVQIQELVR--------GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN   85 (400)
Q Consensus        14 ~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~   85 (400)
                      ...+.|..+.++.+        .++++|+|+.|.+++++|+.+.+++.+++.+.....|++..|..++++++++++.+.+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~  112 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY  112 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTT
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence            44556666666552        6789999999999988899999999999876335678888899999999999998887


Q ss_pred             CC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-----------CCCCCH
Q 015768           86 KL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-----------TLHPDA  152 (400)
Q Consensus        86 ~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~  152 (400)
                      |.  ++++|++|+|+++|+..++.+++++||+|+++.|+|+++...++..|.+++.+ |.+++           ++.+|+
T Consensus       113 g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~d~  191 (447)
T 3b46_A          113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYV-PINPPKELDQRNTRGEEWTIDF  191 (447)
T ss_dssp             TSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-EEECCGGGGTSCBCSTTSEECH
T ss_pred             CCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eCCCccccccccccccCcccCH
Confidence            64  56899999999999999999999999999999999999999999999999988 77554           467899


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cccc---CCCcEEEE
Q 015768          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HCCV---EGDHVVNL  227 (400)
Q Consensus       153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~~~---~~~~~i~~  227 (400)
                      +.|++.++++  +++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..  ....   ..++++++
T Consensus       192 ~~l~~~l~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i  269 (447)
T 3b46_A          192 EQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTV  269 (447)
T ss_dssp             HHHHTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEE
T ss_pred             HHHHHhhccC--CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEE
Confidence            9999999754  499999999999999999999999999999999999999999998876521  1112   24689999


Q ss_pred             eccccccCCCcceeEEEEc-cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       228 ~s~sK~~g~~g~~~G~i~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      +|+||.+|++|+|+||+++ +   +++++.+.......+++.+.+.+.++..+|+..  .++++++++.++++++.+.+.
T Consensus       270 ~S~sK~~~~~G~riG~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~  346 (447)
T 3b46_A          270 GSAGKSFAATGWRIGWVLSLN---AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSI  346 (447)
T ss_dssp             EEHHHHTTCTTSCCEEEECSC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCchhcCCcchhhEEEEeCC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999989999999999 6   788888887666567888999999999999864  466788889999999999999


Q ss_pred             hccCCCCcccCCCCceEEEeeCCCC--------------CCCHHHHHHHHHHhcCeEEeCCCccCC-------CCeEEEE
Q 015768          305 LSPLGEGAVKGGEGAIYLWARLPEK--------------HLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRIS  363 (400)
Q Consensus       305 L~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~~gi~v~~g~~~~~-------~~~iRi~  363 (400)
                      |++++. .+..+.+++|+|++++..              ..+..+++.+|++++||.+.||..|+.       ++++||+
T Consensus       347 L~~~g~-~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls  425 (447)
T 3b46_A          347 FDELGL-PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFA  425 (447)
T ss_dssp             HHHHTC-CEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEE
T ss_pred             HHHCCC-eecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEE
Confidence            998854 667788899999998752              124567888887779999999988753       6899999


Q ss_pred             eccCCHHHHHHHHHHHHH
Q 015768          364 FGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       364 ~~~~~~~~~~~~~~~l~~  381 (400)
                      ++. +++++++++++|++
T Consensus       426 ~~~-~~e~l~~~~~~l~~  442 (447)
T 3b46_A          426 VCK-DDAYLENAVERLKL  442 (447)
T ss_dssp             CCS-CHHHHHHHHHHGGG
T ss_pred             EeC-CHHHHHHHHHHHHH
Confidence            996 89999999999876

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.2e-48  Score=366.09  Aligned_cols=374  Identities=22%  Similarity=0.341  Sum_probs=313.0

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      |++++|+.....+.+..+.++.. .+++|+|+.+.+++++++.+++++.+.+.++ ...|++..+..++++++++++.+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~   78 (411)
T 2o0r_A            1 MATVSRLRPYATTVFAEMSALAT-RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRH   78 (411)
T ss_dssp             -CCCGGGGGGSSCHHHHHHHHHH-TTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CchhhHhHhcCccHHHHHHHHhh-cCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence            45788888877777777766544 4679999999998888999999999998764 457877788999999999999988


Q ss_pred             cCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--CCCCCHHHHHHhh
Q 015768           85 NKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTL  159 (400)
Q Consensus        85 ~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l  159 (400)
                      +|+  +++ +|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++  ++.+|++.+++.+
T Consensus        79 ~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l  157 (411)
T 2o0r_A           79 FGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV-PLVPDGRGFALDADALRRAV  157 (411)
T ss_dssp             HCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHHHC
T ss_pred             cCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEe-eccccccCCCCCHHHHHHhh
Confidence            774  577 99999999999999999999999999999999999999999999999999 87654  5668999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEecccccc
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSKAY  234 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK~~  234 (400)
                      +++  +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++....   ..  ..+.++++.|+||.+
T Consensus       158 ~~~--~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~  235 (411)
T 2o0r_A          158 TPR--TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF  235 (411)
T ss_dssp             CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT
T ss_pred             ccC--ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc
Confidence            764  49999999999999999999999999999999999999999998887553211   11  146799999999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      |++|+|+||++.+   +++++.+.......+++.+.+.+.++..+|+...+++++..+++.++++++.+.|++++ +.+.
T Consensus       236 ~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~  311 (411)
T 2o0r_A          236 NCTGWKIGWACGP---AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIG-FAVH  311 (411)
T ss_dssp             TCTTTCEEEEECC---HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEC
T ss_pred             CCccceEEEEeeC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CEec
Confidence            9899999999998   78888887766555677788888888889986567788889999999999999998874 4667


Q ss_pred             CCCCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccC-------------CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACG-------------CRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~-------------~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      .+.+++++|++++.. ..+..+++.+|++++||.+.||..|.             .++++||+++. +++++++++++|+
T Consensus       312 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~  390 (411)
T 2o0r_A          312 DSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLDEAIRRLS  390 (411)
T ss_dssp             CCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHHHHHHHHG
T ss_pred             CCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence            777788999998752 13577888888767899999998772             24689999986 8999999999999


Q ss_pred             HHHHHHhc
Q 015768          381 RGLEELVK  388 (400)
Q Consensus       381 ~~l~~~~~  388 (400)
                      +++++...
T Consensus       391 ~~~~~~~~  398 (411)
T 2o0r_A          391 VLAERPAT  398 (411)
T ss_dssp             GGGC----
T ss_pred             HHHhccCc
Confidence            88766543

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.9e-47  Score=363.10  Aligned_cols=350  Identities=22%  Similarity=0.315  Sum_probs=305.3

Q ss_pred             CeEEcCCCCCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--C-CcEEEeCChHHHHHHHH
Q 015768           31 NAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--K-SSVMVTAGANQAFVNIV  106 (400)
Q Consensus        31 ~~i~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~-~~i~~~~g~t~a~~~~~  106 (400)
                      ++|+|++|++. +++++.+++++.+.+.+.....|++..+..++++++++++.+.+|.+  + +++++|+|+++++..++
T Consensus        40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~  119 (407)
T 3nra_A           40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV  119 (407)
T ss_dssp             CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred             ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence            48999998754 78899999999998876444468778899999999999999988864  3 79999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-----CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      .++.++||+|+++.|+|.++...++..|++++.+ |.+     ++++.+|++.+++.+++++  ++|++++|+||||.++
T Consensus       120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~v~~~~p~nptG~~~  196 (407)
T 3nra_A          120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYVSADETRAGLDLTGLEEAFKAGA--RVFLFSNPNNPAGVVY  196 (407)
T ss_dssp             HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EBCCCSSCCSSCCBCHHHHHHHHHTTC--CEEEEESSCTTTCCCC
T ss_pred             HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEe-ecccccccCcCCCcCHHHHHHHHhhCC--cEEEEcCCCCCCCccc
Confidence            9999999999999999999999999999999999 773     2456789999999998754  8999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc------cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      +.+++++|+++|++||+++|+||+|+.+.+++.....      ...+++++++|+||.+|++|+|+||++.+   +++++
T Consensus       197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~  273 (407)
T 3nra_A          197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS---RAIIA  273 (407)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC---HHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC---HHHHH
Confidence            9999999999999999999999999998876543322      22567899999999999899999999998   88989


Q ss_pred             HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768          256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       256 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (400)
                      .+.......+++.+.+.+.++..+++...+++++..++++++++++.+.|++++.+.+..+.+++++|+.++....+..+
T Consensus       274 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (407)
T 3nra_A          274 RMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAE  353 (407)
T ss_dssp             HHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHH
T ss_pred             HHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHH
Confidence            88887777778888899998888888656778888999999999999999998776777788789999999874457888


Q ss_pred             HHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          336 VVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +..+|++++||.+.+|..|+  .++++||+++. +++++++++++|+++++++.
T Consensus       354 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~~~~~  406 (407)
T 3nra_A          354 FVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTLVERYR  406 (407)
T ss_dssp             HHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHHB
T ss_pred             HHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHHHhh
Confidence            99988767899999999886  57899999996 99999999999999998764

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=7.6e-47  Score=356.81  Aligned_cols=363  Identities=27%  Similarity=0.433  Sum_probs=305.3

Q ss_pred             HHHHhhhcCchHH----HHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIM----VQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +++|+.....+.+    ....+..+.++++++|+.+.++++.++.+++++.+.+.+. ...|++..+..++++++++++.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~la~~~~   92 (389)
T 1o4s_A           14 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIG   92 (389)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence            3455554433322    2333333467899999999998888899999999988764 3468777789999999999998


Q ss_pred             hhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768           83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l  159 (400)
                      +.+|+  +++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++.+++.+
T Consensus        93 ~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l  171 (389)
T 1o4s_A           93 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVV-ETFMSKNFQPSLEEVEGLL  171 (389)
T ss_dssp             HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHHTC
T ss_pred             HHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhc
Confidence            88775  67899999999999999999999999999999999999999999999999999 8775 46778999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccC--CCcEEEEeccccccC
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVE--GDHVVNLFSFSKAYG  235 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~--~~~~i~~~s~sK~~g  235 (400)
                      +++  +++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++...  ....  .+++++++|+||++|
T Consensus       172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~  249 (389)
T 1o4s_A          172 VGK--TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS  249 (389)
T ss_dssp             CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT
T ss_pred             ccC--ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcC
Confidence            765  4899999999999999999999999999999999999999999888754211  1111  478999999999998


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      ++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+.+   .++..+++.++++.+.+.|++++ +.+..
T Consensus       250 ~~G~r~G~l~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~l~~~L~~~g-~~~~~  322 (389)
T 1o4s_A          250 MTGWRVGYLISS---EKVATAVSKIQSHTTSCINTVAQYAALKALEVD---NSYMVQTFKERKNFVVERLKKMG-VKFVE  322 (389)
T ss_dssp             CGGGCCEEEECC---HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHHHHHHTT-CCCCC
T ss_pred             CcccceEEEEeC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-Ceeec
Confidence            899999999998   788888887766566788899999999999864   56778888999999999998884 46666


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +.+++++|++++   .+..++..+|++++||.+.||..|+.++++|++++. +++++++++++|.++++
T Consensus       323 ~~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          323 PEGAFYLFFKVR---GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDFLN  387 (389)
T ss_dssp             CSBSSEEEEECS---SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred             CCcceEEEEeCC---CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence            777889999987   367888888876889999999888777899999996 99999999999998874

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=2.3e-47  Score=365.06  Aligned_cols=369  Identities=22%  Similarity=0.359  Sum_probs=311.7

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      +++|+.......+..+.++.. .+++|+|+.+.+++++++.+++++.+.+.+.  ....|++..+..++++++++++.+.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~   93 (429)
T 1yiz_A           15 LPKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQL   93 (429)
T ss_dssp             SSSSCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHH
T ss_pred             hhHHhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHH
Confidence            456666666666766666544 4689999999998888999999999988763  2456877778999999999999888


Q ss_pred             cC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC---------CCCCCH
Q 015768           85 NK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDA  152 (400)
Q Consensus        85 ~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~  152 (400)
                      +|  ++++ +|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++         ++.+|+
T Consensus        94 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~  172 (429)
T 1yiz_A           94 VDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFI-PLKPNKTGGTISSADWVLDN  172 (429)
T ss_dssp             HTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCSSSSEEGGGCBCCH
T ss_pred             hCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCcccccccccccCcccCH
Confidence            77  4578 99999999999999999999999999999999999999999999999999 87764         467899


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc---ccc--CCCcEEEE
Q 015768          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCV--EGDHVVNL  227 (400)
Q Consensus       153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~--~~~~~i~~  227 (400)
                      +.+++.++++  +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++...   ...  ..++++++
T Consensus       173 ~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~  250 (429)
T 1yiz_A          173 NELEALFNEK--TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI  250 (429)
T ss_dssp             HHHHHHCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEE
T ss_pred             HHHHHHhccC--ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEE
Confidence            9999999754  4999999999999999999999999999999999999999999988765322   112  24689999


Q ss_pred             eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-----C--cHHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-----G--PEWVTERVKDLVRNREI  300 (400)
Q Consensus       228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~--~~~~~~~~~~~~~~~~~  300 (400)
                      .|+||.+|++|+|+||++++   +++++.+.......+++.+++.+.++..+|+.     +  .+++++.++.++++++.
T Consensus       251 ~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (429)
T 1yiz_A          251 GSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDY  327 (429)
T ss_dssp             EEHHHHHTCGGGCCEEEESC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred             ecchhccCCCCcceEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHH
Confidence            99999998899999999998   78888888776666788899999999999986     5  57788889999999999


Q ss_pred             HHHHhccCCCCcccCCCCceEEEeeCCCCC-----------CCHHHHHHHHHHhcCeEEeCCCccCC-------CCeEEE
Q 015768          301 IREALSPLGEGAVKGGEGAIYLWARLPEKH-----------LDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRI  362 (400)
Q Consensus       301 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~gi~v~~g~~~~~-------~~~iRi  362 (400)
                      +.+.|++++ +.+..+.+++++|++++...           .+..+++.+|++++||.+.||..|..       ++++||
T Consensus       328 l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRi  406 (429)
T 1yiz_A          328 MASFLAEVG-MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRY  406 (429)
T ss_dssp             HHHHHHHHT-CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEE
T ss_pred             HHHHHHhCC-CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEE
Confidence            999998875 46666777899999987531           24567888787689999999987752       689999


Q ss_pred             EeccCCHHHHHHHHHHHHHHHH
Q 015768          363 SFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      +++. +++++++++++|+++++
T Consensus       407 s~~~-~~e~i~~~l~~l~~~l~  427 (429)
T 1yiz_A          407 CFFK-KDENLQKAAEILRKWKG  427 (429)
T ss_dssp             ECCS-CHHHHHHHHHHHHHHSC
T ss_pred             EecC-CHHHHHHHHHHHHHhcc
Confidence            9996 99999999999998764

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.8e-47  Score=357.28  Aligned_cols=345  Identities=22%  Similarity=0.353  Sum_probs=297.3

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CC-cEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS-SVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~-~i~~~~g~t~a~~  103 (400)
                      +.|+++|+|+.+.++++.++.+++++.+.+.++....|++..+..++++++++++.+.+|++  ++ +|++|+|+++++.
T Consensus        22 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~  101 (376)
T 2dou_A           22 ERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA  101 (376)
T ss_dssp             HTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred             ccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence            56788999999999888899999999998866435567654578899999999998888764  45 9999999999999


Q ss_pred             HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~  183 (400)
                      .++.++.++||+|+++.|+|+++...++..|++++.+ |. ++++.+|++.+++.+++++  ++|++++|+||||.++|.
T Consensus       102 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~-~~~~~~d~~~l~~~l~~~~--~~v~l~~p~nptG~~~~~  177 (376)
T 2dou_A          102 HLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLI-PL-REDGLADLKAVPEGVWREA--KVLLLNYPNNPTGAVADW  177 (376)
T ss_dssp             HHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEE-CB-CTTSSBCGGGSCHHHHHHE--EEEEECSSCTTTCCCCCH
T ss_pred             HHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEe-eC-CCCCCCCHHHHHHhhccCc--eEEEECCCCCCcCccCCH
Confidence            9999999999999999999999999999999999999 87 6777789999999887544  999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      +++++|+++|++||+++|+||+|+.+.+++......    ..+++++++|+||.+|++|+|+||++.+   +++++.+..
T Consensus       178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~  254 (376)
T 2dou_A          178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS---EEALARLER  254 (376)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC---HHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC---HHHHHHHHH
Confidence            999999999999999999999999988765321111    2367899999999998899999999988   788888887


Q ss_pred             hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHH
Q 015768          260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW  339 (400)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (400)
                      .....+++.+.+.+.++..+|+...+++++.++.++++++.+.+.|+++  +.+..+.+++++|++++.. .+..++..+
T Consensus       255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  331 (376)
T 2dou_A          255 VKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEG-VDDLEFGLR  331 (376)
T ss_dssp             HHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTT-CCHHHHHHH
T ss_pred             HHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCC-CCHHHHHHH
Confidence            7666667789999999999998766778888999999999999999987  4677777789999999753 367788888


Q ss_pred             HHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          340 LAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       340 l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      |. ++||.+.||..|+.  ++++||+++. +++++++++++|++++
T Consensus       332 l~-~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          332 LV-ERGVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL  375 (376)
T ss_dssp             HH-HTTEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred             HH-HCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence            87 56999999988863  6899999996 8999999999998764

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=5.6e-47  Score=356.19  Aligned_cols=347  Identities=15%  Similarity=0.222  Sum_probs=302.0

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~  104 (400)
                      .+|+++++|+.+.+++++++++++++.+.+.+. ...|++ .+ .++++++++++.+.+|  ++++++++|+|++++++.
T Consensus        20 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~   96 (377)
T 3fdb_A           20 RYGQGVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYI   96 (377)
T ss_dssp             SSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHH
T ss_pred             ccCCCeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHH
Confidence            468899999999999999999999999998764 456876 66 8999999999988877  458899999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      ++.++.++||+|+++.|+|+++...++..|++++.+ |.+++   +|++.+++.+++++  +++++++|+||||.+++.+
T Consensus        97 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~---~d~~~l~~~l~~~~--~~v~i~~p~nptG~~~~~~  170 (377)
T 3fdb_A           97 AIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFI-DATGG---INLHDVEKGFQAGA--RSILLCNPYNPLGMVFAPE  170 (377)
T ss_dssp             HHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEE-ECTTS---CCHHHHHHHHHTTC--CEEEEESSBTTTTBCCCHH
T ss_pred             HHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEc-cCCCC---CCHHHHHHHhccCC--CEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999 88765   79999999998765  8999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCC-CCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      ++++|+++|++||+++|+||+|+.+.+++ ......    ..+++++++|+||.+|++|+|+||++..+  +++++.+..
T Consensus       171 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~~~~  248 (377)
T 3fdb_A          171 WLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN--PSDAEHWQQ  248 (377)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS--HHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC--HHHHHHHHH
Confidence            99999999999999999999999988866 222221    14677999999999988999999988754  788888887


Q ss_pred             hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHHH
Q 015768          260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVR  338 (400)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (400)
                      .....+++++++.+.++..+++...++++++.++++++++.+.+.|++ ++++.+..+.+++++|++++....+ .+++.
T Consensus       249 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  327 (377)
T 3fdb_A          249 LSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE-GSPSE  327 (377)
T ss_dssp             SCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC-SCHHH
T ss_pred             HHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCC-HHHHH
Confidence            766667789999999999999876677889999999999999999998 6667888888888889999864323 56777


Q ss_pred             HHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          339 WLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       339 ~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+++++||.+.||..|+.  ++++|++++. +++++++++++|+++++++
T Consensus       328 ~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~~  376 (377)
T 3fdb_A          328 FFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSHH  376 (377)
T ss_dssp             HHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence            787677999999998874  7899999996 8999999999999998653

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=1.2e-46  Score=355.54  Aligned_cols=350  Identities=17%  Similarity=0.234  Sum_probs=302.2

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~  105 (400)
                      .++++|+|+.+++++++|+++++++.+.+.+. ...|++.  ..++++++++++.+.+|  +++++|++|+|++++++.+
T Consensus        25 ~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~  101 (391)
T 3dzz_A           25 LKEKELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAM  101 (391)
T ss_dssp             CCTTCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHH
T ss_pred             cCCCceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHH
Confidence            56799999999999999999999999998764 4456544  68999999999999988  6689999999999999999


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCC
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~  182 (400)
                      +.++.++||+|+++.|+|+++...++..|.+++.+ |.+  +..+.+|++.+++.++ ++  +++|++++|+||||.+++
T Consensus       102 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~l~~~~--~~~v~i~~p~nptG~~~~  178 (391)
T 3dzz_A          102 VRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS-DLIYENSKYSVNWADLEEKLATPS--VRMMVFCNPHNPIGYAWS  178 (391)
T ss_dssp             HHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEEC-CCEEETTEEECCHHHHHHHHTSTT--EEEEEEESSBTTTTBCCC
T ss_pred             HHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEe-eeeecCCceeecHHHHHHHHhccC--ceEEEEECCCCCCCcccC
Confidence            99999999999999999999999999999999999 885  3345689999999997 44  599999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      .+++++|+++|++||+++|+|++|+.+.+.+.....   ..   .++++++.|+||.+|++|+|+||++.++  +++.+.
T Consensus       179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~  256 (391)
T 3dzz_A          179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN--PDLRAR  256 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS--HHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC--HHHHHH
Confidence            999999999999999999999999988876532221   11   4577999999999998999999999875  678888


Q ss_pred             HHHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768          257 LLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       257 l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      +..... ...++++.+.+.++..+++...++.+++.++++++++++.+.|++ ++++.+..+.+++++|+.++....+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (391)
T 3dzz_A          257 AEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAE  336 (391)
T ss_dssp             HHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHH
T ss_pred             HHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHH
Confidence            876643 335678889999999888876677889999999999999999998 777788888888999999986434788


Q ss_pred             HHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++..+|++++||.+.||..|+.  ++++|++++. +++++++++++|+++++++
T Consensus       337 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~  389 (391)
T 3dzz_A          337 DFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL  389 (391)
T ss_dssp             HHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            8999886689999999998875  4899999995 9999999999999999865

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=9e-47  Score=358.34  Aligned_cols=372  Identities=26%  Similarity=0.394  Sum_probs=308.6

Q ss_pred             HHHHhhhcCchHHH---HHHHHHhcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMV---QIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         7 ~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      .++|+.+...+...   ...++.++++++++|+.+.+   +++.++.+++++.+.+.+. ...|++..+..+++++++++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~   90 (406)
T 1xi9_A           12 ASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVER   90 (406)
T ss_dssp             CCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred             HHHHHhcCChhHHHHHHHHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence            45566543332222   44455667889999999998   7788899999999888764 34687777899999999999


Q ss_pred             HHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768           81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (400)
Q Consensus        81 l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~  157 (400)
                      +.+.+|  ++++++++|+|+++|+..++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++.+++
T Consensus        91 l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~  169 (406)
T 1xi9_A           91 EKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDIRK  169 (406)
T ss_dssp             HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-EEEGGGTSEECHHHHHH
T ss_pred             HHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCCCcCCcCCHHHHHH
Confidence            988775  457899999999999999999999999999999999999999999999999999 7765 567789999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCc-EEEEecccccc
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDH-VVNLFSFSKAY  234 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~-~i~~~s~sK~~  234 (400)
                      .++++  +++|++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.....  ...++ +++++|+||++
T Consensus       170 ~l~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (406)
T 1xi9_A          170 KITDR--TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY  247 (406)
T ss_dssp             HCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTT
T ss_pred             hhCcC--ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEecccccc
Confidence            99765  499999999999999999999999999999999999999999988774322111  12466 89999999999


Q ss_pred             CCCcceeEEEE--ccCCcH----HHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768          235 GMMGWRVGYIA--YPSEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       235 g~~g~~~G~i~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      |++|+|+||++  .+   +    ++++.+....... ++++.+.+.++..+|+...++++++.+.+.++++.+.+.|+++
T Consensus       248 ~~~G~r~G~~~~~~~---~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  323 (406)
T 1xi9_A          248 FATGWRLGYMYFVDP---ENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI  323 (406)
T ss_dssp             CCGGGCCEEEEEECT---TCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             CCCccEEEEEEEecC---chhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            88999999998  77   6    8888887765544 7788899999999997556678888899999999999999988


Q ss_pred             CCCcccCCCCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          309 GEGAVKGGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +++.+..+.+++++|+.++.. ..+..+++.+|++++||.+.+|..|+.  ++++||+++ .+++++++++++|++++++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~~~l~~  402 (406)
T 1xi9_A          324 PGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFEKFMKE  402 (406)
T ss_dssp             TTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHHH
Confidence            665666777788898888641 236778888887688999999988864  789999999 6999999999999999987


Q ss_pred             Hh
Q 015768          386 LV  387 (400)
Q Consensus       386 ~~  387 (400)
                      +.
T Consensus       403 ~~  404 (406)
T 1xi9_A          403 RL  404 (406)
T ss_dssp             C-
T ss_pred             Hh
Confidence            64

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=1.5e-46  Score=353.86  Aligned_cols=363  Identities=26%  Similarity=0.377  Sum_probs=299.4

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      |++++|+.....+.+..+.++.+. +++++|+.+.+++++++.+.+++.+.+.+  ...|+...+..++++++++++   
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~---   74 (381)
T 1v2d_A            1 MRLHPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF---   74 (381)
T ss_dssp             CCCCGGGGGC---CHHHHHHHHHH-HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH---
T ss_pred             CchhhhhhhcCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhc---
Confidence            446777776666666666665444 67999999999888899999999998876  456877778999999999996   


Q ss_pred             cCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccC
Q 015768           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETK  162 (400)
Q Consensus        85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~  162 (400)
                       +++++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.+  ++++.+|++.+++.++++
T Consensus        75 -~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~  152 (381)
T 1v2d_A           75 -AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV-RLDLTPEGFRLDLSALEKALTPR  152 (381)
T ss_dssp             -TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHTTCCTT
T ss_pred             -CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCCCCccCCcCHHHHHHhcCcC
Confidence             7778899999999999999999999999999999999999999999999999999 876  444678999999998755


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcce
Q 015768          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~  240 (400)
                        +++|++++|+||||.+++.+++++|.++|++||+++|+|++|+.+.++.......  ..+.+++++|+||.+|++|+|
T Consensus       153 --~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r  230 (381)
T 1v2d_A          153 --TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYR  230 (381)
T ss_dssp             --EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGC
T ss_pred             --CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccc
Confidence              4999999999999999999999999999999999999999999887632111111  357899999999999889999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +||++.+   +++++.+.......+++++.+.+.++..+|+..  .+++++..++++++++++.+.|++.+ +.+..+.+
T Consensus       231 ~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~  306 (381)
T 1v2d_A          231 VGWIVGP---KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMG-LRVYVPEG  306 (381)
T ss_dssp             CEEEECC---TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEECCSB
T ss_pred             eEEEEeC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCC-CEecCCCc
Confidence            9999998   677777776655557788899999988888854  46778889999999999999999865 46777777


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++|++++..  +    ...+++++||.+.||..|..    ++++||+++. +++++++++++|++++++..+
T Consensus       307 ~~~~~~~~~~~--~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~~~r~  373 (381)
T 1v2d_A          307 TYFLMAELPGW--D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNSPRE  373 (381)
T ss_dssp             SSEEEEECTTC--C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC-----
T ss_pred             ceEEEEecChH--h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhccc
Confidence            88999999753  2    44455689999999988863    6799999997 999999999999999887654

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=5.8e-46  Score=348.44  Aligned_cols=354  Identities=24%  Similarity=0.392  Sum_probs=297.4

Q ss_pred             HHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            8 AKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      ++|+.....+.+.++..+    -+.++++|+|+.+.+++++++.+++++.+.+.+. ...|++..+..++++++++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~   81 (370)
T 2z61_A            3 SKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKD   81 (370)
T ss_dssp             CHHHHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhhhhhccccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHH
Confidence            455555443333333332    3457889999999998877899999999988764 45687777899999999999998


Q ss_pred             hcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768           84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus        84 ~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      .+|  ++++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |       +|++++++.+++
T Consensus        82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~-------~d~~~l~~~l~~  153 (370)
T 2z61_A           82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFC-D-------FTVESLEEALSD  153 (370)
T ss_dssp             HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-C-------SSHHHHHHHCCS
T ss_pred             HhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-C-------CCHHHHHHhccc
Confidence            776  467899999999999999999999999999999999999999999999999988 6       589999999976


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCC
Q 015768          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~  237 (400)
                      +  +++|++++|+||||.+++.+    |.++|++||+++|+||+|+.+.+++....  ..  ..+++++++|+||.+|++
T Consensus       154 ~--~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~  227 (370)
T 2z61_A          154 K--TKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMT  227 (370)
T ss_dssp             S--EEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred             C--ceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCc
Confidence            4  48999999999999999954    99999999999999999998887543221  11  246899999999999889


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  316 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  316 (400)
                      |+|+||++++   +++++.+.......+++++.+.+.++..+|+. +.++.++..++++++++.+.+.|++++ +.+..+
T Consensus       228 G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~  303 (370)
T 2z61_A          228 GWRIGYVISN---DEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG-WEVNNP  303 (370)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCCCC
T ss_pred             cceEEEEEEC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcC-CeecCC
Confidence            9999999999   78888888776666778899999999988875 456778888999999999999999884 466677


Q ss_pred             CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      .+++++|+.++.   +..++..+|++++||.+.+|..|+.  ++++|++++ .+++++++++++|+++++
T Consensus       304 ~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~l~  369 (370)
T 2z61_A          304 IGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEFLN  369 (370)
T ss_dssp             CBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHHHC
T ss_pred             CcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHHHh
Confidence            778999999875   5778888887678999999988863  789999999 499999999999998874

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=4.5e-46  Score=349.95  Aligned_cols=346  Identities=14%  Similarity=0.155  Sum_probs=297.2

Q ss_pred             hHHHHHHHHHh----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC
Q 015768           17 PIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS   90 (400)
Q Consensus        17 ~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~   90 (400)
                      ..+.++.+.++    ++ ++|+|+.+.++++.|+.+++++.+.+..  ...|++..+..++++++++++.+.+|+  +++
T Consensus         7 ~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~   83 (376)
T 3ezs_A            7 YPFERLRALLKEITPKK-RGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIELKEN   83 (376)
T ss_dssp             CHHHHHHHHHTTCCCSS-CCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGG
T ss_pred             chHHHHHHHHHhhhccC-CEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHH
Confidence            34455555543    34 8999999999998899999999988732  567887788999999999999998887  789


Q ss_pred             cEEEeCChHHHHHHHHHHhcCC--CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeE
Q 015768           91 SVMVTAGANQAFVNIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKL  167 (400)
Q Consensus        91 ~i~~~~g~t~a~~~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~  167 (400)
                      +|++|+|+++++..++.++.++  ||+|+++.|+|+++...++..|.+++.+ |.+++ ++.  + ++++.+.+++  ++
T Consensus        84 ~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~--~-~l~~~~~~~~--~~  157 (376)
T 3ezs_A           84 ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM-PLTKENDFT--P-SLNEKELQEV--DL  157 (376)
T ss_dssp             GEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTSC--C-CCCHHHHHHC--SE
T ss_pred             HEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEc-ccCCCCCcc--h-hHHhhhccCC--CE
Confidence            9999999999999999999999  9999999999999999999999999999 87765 443  3 5566665554  89


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc---------CCCcEEEEeccccccCCCc
Q 015768          168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---------EGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       168 v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---------~~~~~i~~~s~sK~~g~~g  238 (400)
                      |++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++......         ..++++++.|+||.+|++|
T Consensus       158 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G  237 (376)
T 3ezs_A          158 VILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG  237 (376)
T ss_dssp             EEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG
T ss_pred             EEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCcc
Confidence            9999999999999999999999999999999999999999988866332221         4678999999999998899


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +|+||++.+   +++++.+.......+++++.+.+.++..+++. .+++++.++.++++++.+.+.|+  +. .  .+.+
T Consensus       238 ~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~--~~-~--~~~~  308 (376)
T 3ezs_A          238 LRSGFIAGD---SRLLEKYKAFRAYLGYTSANAIQKASEAAWLD-DRHAEFFRNIYANNLKLARKIFK--NT-L--IYPY  308 (376)
T ss_dssp             GCCEEEEEC---HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC-SHHHHHHHHHHHHHHHHHHHHST--TC-C--CCSB
T ss_pred             ceeEEEeeC---HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHhc--CC-C--CCCc
Confidence            999999988   88999998887777888999999999999986 56788889999999999999998  32 2  5667


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++++|++++    +..++..+|++++||.+.||..|+    .++++||+++. +++++++++++|++++++
T Consensus       309 ~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~  374 (376)
T 3ezs_A          309 SFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYREN  374 (376)
T ss_dssp             SSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHCC
T ss_pred             ceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence            899999997    578888888755899999999886    46899999986 999999999999998864

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=3.7e-46  Score=353.30  Aligned_cols=352  Identities=18%  Similarity=0.276  Sum_probs=297.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      +++++|+.+++++++++.+.+++.+.+.+. ...|+..  ..++++++++++.+.+|  +++++|++|+|+++++..++.
T Consensus        31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~  107 (399)
T 1c7n_A           31 NEVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVR  107 (399)
T ss_dssp             TTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHH
T ss_pred             CCceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHH
Confidence            589999999988888999999999988643 4567543  89999999999988877  668899999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC-CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~-~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      ++.++||+|+++.|+|+++...++..|.+++.+ |.+ ++| +.+|++.+++.++.. .+++|++++|+||||.++|.++
T Consensus       108 ~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~~~~~  185 (399)
T 1c7n_A          108 EFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC-ELLEKDGYYTIDFQKLEKLSKDK-NNKALLFCSPHNPVGRVWKKDE  185 (399)
T ss_dssp             HHCCTTCEEEECSSCCTHHHHHHHTTTCEEEEC-CCEEETTEEECCHHHHHHHHTCT-TEEEEEEESSBTTTTBCCCHHH
T ss_pred             HhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEec-ccccCCCCEEEcHHHHHHHhccC-CCcEEEEcCCCCCCCcCcCHHH
Confidence            999999999999999999999999999999998 875 333 568999999999732 2599999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCc---cccC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      +++|+++|++||+++|+||+|+.+.+++...   ....   .++++++.|+||.+|++|+|+||++.++  +++++.+..
T Consensus       186 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~l~~  263 (399)
T 1c7n_A          186 LQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN--PDIRERFTK  263 (399)
T ss_dssp             HHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC--HHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC--HHHHHHHHH
Confidence            9999999999999999999999988765322   1111   3678999999999998999999999875  568888877


Q ss_pred             hhccCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768          260 VQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       260 ~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      .....++ +++.+.+.++..+++...+++++..+.+.++++.+.+.|++ ++++.+..+.+++++|++++....+..++.
T Consensus       264 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (399)
T 1c7n_A          264 SRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAME  343 (399)
T ss_dssp             HHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHH
T ss_pred             HHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHH
Confidence            6654444 67899999998888865677888889999999999999998 766677778878888999875323677888


Q ss_pred             HHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          338 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      .+|++++||.+.||..|+  .++++||+++. +++++++++++|+++++++.++
T Consensus       344 ~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~~~  396 (399)
T 1c7n_A          344 EFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDLKNR  396 (399)
T ss_dssp             HHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHHHHhc
Confidence            888667899999998886  47899999997 6899999999999999987653

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=2e-46  Score=356.42  Aligned_cols=365  Identities=23%  Similarity=0.363  Sum_probs=308.5

Q ss_pred             HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL   87 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~   87 (400)
                      |+|+.....+.+..+.+. ..++++|+|+.|.+++++|+.+++++.+.+.+.....|++..+..++++++++++.+.+|.
T Consensus         2 ~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~   80 (410)
T 3e2y_A            2 AKRIEGLDSNVWVEFTKL-AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQR   80 (410)
T ss_dssp             CGGGTTCCCCHHHHTTTT-TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTS
T ss_pred             chhhccCCccHHHHHHHH-hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCC
Confidence            346666666666666554 4557899999999999999999999999987654567887788999999999999988764


Q ss_pred             --CC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC----------CCCCCCHHH
Q 015768           88 --YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS----------KTLHPDADW  154 (400)
Q Consensus        88 --~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~e~  154 (400)
                        ++ ++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++          .++.+|+++
T Consensus        81 ~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~d~~~  159 (410)
T 3e2y_A           81 QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRE  159 (410)
T ss_dssp             CCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEECCCCSSCCBGGGEECCHHH
T ss_pred             CCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-eccccccccccccccCCcCCHHH
Confidence              45 799999999999999999999999999999999999999999999999888 7652          345679999


Q ss_pred             HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEec
Q 015768          155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFS  229 (400)
Q Consensus       155 l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s  229 (400)
                      +++.+++++  ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.....   .  ..++++++.|
T Consensus       160 l~~~~~~~~--~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  237 (410)
T 3e2y_A          160 LESKFSSKT--KAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGS  237 (410)
T ss_dssp             HHTTCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEE
T ss_pred             HHhhcCCCc--eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEec
Confidence            999987654  99999999999999999999999999999999999999999998876543211   1  2367899999


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHH
Q 015768          230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~l~  302 (400)
                      +||.+|++|+|+||++.+   +++++.+.......+++++.+.+.++..+++.       ..++++++.+.++++++.+.
T Consensus       238 ~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (410)
T 3e2y_A          238 AGKTFSVTGWKLGWSIGP---AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMV  314 (410)
T ss_dssp             HHHHSSCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred             chhhcCCCCceEEEEEEC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHH
Confidence            999999899999999998   78888888877777888999999999998872       34678889999999999999


Q ss_pred             HHhccCCCCcccCCCCceEEEeeCCCCC--CC--------HHHHHHHHHHhcCeEEeCCCccCC-------CCeEEEEec
Q 015768          303 EALSPLGEGAVKGGEGAIYLWARLPEKH--LD--------DFEVVRWLAHRHGVVVIPGGACGC-------RGHLRISFG  365 (400)
Q Consensus       303 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~l~~~~gi~v~~g~~~~~-------~~~iRi~~~  365 (400)
                      +.|++++. .+..+.+++|+|++++...  .+        ..+++.++++++||.+.||..|+.       ++++||+++
T Consensus       315 ~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~  393 (410)
T 3e2y_A          315 RLLNSVGL-KPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI  393 (410)
T ss_dssp             HHHHTTTC-EEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC
T ss_pred             HHHHHCCC-eecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc
Confidence            99999854 6777888999999876421  11        247778787789999999998853       589999999


Q ss_pred             cCCHHHHHHHHHHHHH
Q 015768          366 GLVEDDCKAAADRLRR  381 (400)
Q Consensus       366 ~~~~~~~~~~~~~l~~  381 (400)
                      . +++++++++++|++
T Consensus       394 ~-~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          394 K-KDSTLDAAEEIFRA  408 (410)
T ss_dssp             C-CHHHHHHHHHHHHT
T ss_pred             C-CHHHHHHHHHHHHh
Confidence            7 99999999999875

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.1e-45  Score=349.28  Aligned_cols=370  Identities=22%  Similarity=0.314  Sum_probs=307.8

Q ss_pred             HHHHhhhcC----chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +++|+....    ...+....+.-+.++++++|+.+.++++.++.+++++ +.+.+. ...|++..+..++++++++++.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la~~~~   93 (409)
T 2gb3_A           16 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAFASYYK   93 (409)
T ss_dssp             CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHHHHHH
Confidence            456665433    2344445555567889999999999888889999999 888654 4568777889999999999999


Q ss_pred             hhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l  159 (400)
                      +.+|  ++++++++|+|+++|+..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+ ++.|++.+
T Consensus        94 ~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~-~~~l~~~l  171 (409)
T 2gb3_A           94 RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPV-TRRMEEGFAI-PQNLESFI  171 (409)
T ss_dssp             HTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEE-ECCGGGTSCC-CTTGGGGC
T ss_pred             HHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ccCCCCCCcc-HHHHHHhh
Confidence            8776  457899999999999999999999999999999999999999999999999999 8875 45655 88999888


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCC
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~  237 (400)
                      +++  +++|++++|+||||.+++.+++++|.++|++||+++|+||+|+.+.+++......  ..+++++++|+||++|++
T Consensus       172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  249 (409)
T 2gb3_A          172 NER--TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSAC  249 (409)
T ss_dssp             CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCG
T ss_pred             CcC--CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCc
Confidence            764  4999999999999999999999999999999999999999999887755222211  146789999999999989


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGG  316 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~  316 (400)
                      |+|+||++.++  +++++.+.......+ +++.+.+.++..+|+.+.++++++.+.+.++++.+.+.|++++ +.+ ..+
T Consensus       250 G~r~G~~~~~~--~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~  325 (409)
T 2gb3_A          250 GARVGCLITRN--EELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHG-LKRFTKP  325 (409)
T ss_dssp             GGCCEEEECSC--HHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCBCCC
T ss_pred             cceEEEEEECc--HHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcC-ceeeeCC
Confidence            99999999983  388888877665555 7889999999999976667788888999999999999999884 455 667


Q ss_pred             CCceEEEeeCCCCCCCHHHHHHHHHHh-----cCeEEeCCCccCC-----CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          317 EGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+++++|++++  ..+..++..+|.++     +||.+.||..|+.     ++++||+++ ++++++++++++|+++++++
T Consensus       326 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~l~~~  402 (409)
T 2gb3_A          326 SGAFYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLMEGLKMF  402 (409)
T ss_dssp             SBSSEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence            77899999987  23678888888754     4999999987753     679999999 59999999999999999887


Q ss_pred             hcc
Q 015768          387 VKD  389 (400)
Q Consensus       387 ~~~  389 (400)
                      .+.
T Consensus       403 ~~~  405 (409)
T 2gb3_A          403 CSS  405 (409)
T ss_dssp             HC-
T ss_pred             hhc
Confidence            643

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=7.3e-46  Score=354.18  Aligned_cols=353  Identities=19%  Similarity=0.227  Sum_probs=300.0

Q ss_pred             CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768           29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (400)
Q Consensus        29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~  102 (400)
                      ++++|+|+.|.+.    +++++.+++++.+.+.+.....|++..+..++++++++++.+. +  +++++|++|+|+|+|+
T Consensus        53 ~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al  131 (427)
T 3dyd_A           53 NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAI  131 (427)
T ss_dssp             TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHH
T ss_pred             CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHH
Confidence            5678999999864    5789999999999887655668988889999999999999654 3  5689999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      +.++.++.++||+|+++.|+|.++...++..|++++.+ |.++ +++.+|++.+++.+++++  ++|++++|+||||.++
T Consensus       132 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~--~~v~i~~p~nptG~~~  208 (427)
T 3dyd_A          132 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLY-NLLPEKSWEIDLKQLEYLIDEKT--ACLIVNNPSNPCGSVF  208 (427)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHSSCCTTE--EEEEEESSCTTTCCCC
T ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC--CEEEEECCCCCCCCCC
Confidence            99999999999999999999999999999999999998 7654 456789999999997654  8999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCc----HHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV----EGF  253 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~----~~~  253 (400)
                      +.+++++|+++|+++|+++|+|++|..+.+++.....    .....+++++|+||.++++|+|+||++.++..    +++
T Consensus       209 ~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i  288 (427)
T 3dyd_A          209 SKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEI  288 (427)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHH
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHH
Confidence            9999999999999999999999999998876543221    12345788999999998899999999987521    246


Q ss_pred             HHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---
Q 015768          254 ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---  329 (400)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---  329 (400)
                      .+.+...... +++++.+.+.++..+|+. ..+++.++.++++++++.+.+.|++++++.+..|.+++|+|+.++..   
T Consensus       289 ~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~  367 (427)
T 3dyd_A          289 RDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFP  367 (427)
T ss_dssp             HHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCT
T ss_pred             HHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcC
Confidence            6666655432 577899999999999984 45778889999999999999999998666777788899999887632   


Q ss_pred             -CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          330 -HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       330 -~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                       ..+..+++.+|++++||.+.||..|+.++++||+++ .+++++++++++|+++++++.
T Consensus       368 ~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~~~~  425 (427)
T 3dyd_A          368 EFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT-VPEVMMLEACSRIQEFCEQHY  425 (427)
T ss_dssp             TCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC-SCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC-CCHHHHHHHHHHHHHHHHHhh
Confidence             135678888887789999999999988999999998 599999999999999998764

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=3.6e-45  Score=345.53  Aligned_cols=355  Identities=17%  Similarity=0.251  Sum_probs=301.2

Q ss_pred             HHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEe
Q 015768           18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVT   95 (400)
Q Consensus        18 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~   95 (400)
                      .|....+.+ +++++++|+.+++++++|+++++++.+.+.+. ...|+  .+..++++++++++.+.+|  ++++++++|
T Consensus        21 ~~d~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~--~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~   96 (391)
T 4dq6_A           21 KWSEMEKKY-GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGYT--TRPDSYNESIVNWLYRRHNWKIKSEWLIYS   96 (391)
T ss_dssp             HHHCHHHHH-SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCB--CCCHHHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred             eeeeccccc-CCCCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCCC--CCCHHHHHHHHHHHHHHhCCCCcHHHeEEc
Confidence            344444433 46899999999999999999999999998764 34454  3568999999999999988  678999999


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--C-CCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--S-KTLHPDADWLEKTLETKPTPKLVSVVN  172 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~-~~~~~~~e~l~~~l~~~~~~~~v~l~~  172 (400)
                      +|++++++.++.++.++||+|+++.|+|+++...++..|++++.+ |.+  + .++.+|++++++.+++   +++|++++
T Consensus        97 ~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~d~~~l~~~l~~---~~~v~i~~  172 (391)
T 4dq6_A           97 PGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS-PLQKLENGNYIMDYEDIENKIKD---VKLFILCN  172 (391)
T ss_dssp             SCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEEC-CCEECTTSCEECCHHHHHHHCTT---EEEEEEES
T ss_pred             CChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEee-eeeecCCCceEeeHHHHHHHhhc---CCEEEEEC
Confidence            999999999999999999999999999999999999999999999 876  3 3456899999999976   49999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cC---CCcEEEEeccccccCCCcceeEEEEc
Q 015768          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VE---GDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~---~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      |+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.....   ..   .++++++.|+||.+|++|+|+||++.
T Consensus       173 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~  252 (391)
T 4dq6_A          173 PHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVL  252 (391)
T ss_dssp             SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred             CCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEe
Confidence            9999999999999999999999999999999999998876543221   11   25679999999999889999999998


Q ss_pred             cCCcHHHHHHHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEe
Q 015768          247 PSEVEGFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWA  324 (400)
Q Consensus       247 ~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~  324 (400)
                      ++  +++.+.+...... ..++++.+.+.++..+++...+++++..++++++++++.+.|++ ++++.+..+.++++.|+
T Consensus       253 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  330 (391)
T 4dq6_A          253 PD--EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWV  330 (391)
T ss_dssp             CS--HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEE
T ss_pred             CC--HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEE
Confidence            85  5788888766433 34578899999999988876677888899999999999999988 67778888888899999


Q ss_pred             eCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      +++....+..++...|.+++||.+.||..|+.  ++++|++++. +++++++++++|++++
T Consensus       331 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          331 DFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNAI  390 (391)
T ss_dssp             ECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred             EhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence            99753347889999887545999999988864  5899999995 9999999999999876

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=2.1e-45  Score=347.12  Aligned_cols=348  Identities=16%  Similarity=0.240  Sum_probs=291.8

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHH-HHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPE-LRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~-~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~  106 (400)
                      +++++|+.+.+++++++++++++.+.+.+. ...|++.  ..+ +++++++++.+.+|  +++++|++|+|++++++.++
T Consensus        28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~  104 (390)
T 1d2f_A           28 ADLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELI  104 (390)
T ss_dssp             --CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHH
T ss_pred             CCeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHH
Confidence            579999999998889999999999988653 4567553  678 99999999998887  66899999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      .++.++||+|+++.|+|+++...++..|.+++.+ |.+++  ++.+|++.+++.++.. .+++|++++|+||||.++|.+
T Consensus       105 ~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~-~~~~v~l~~p~nptG~~~~~~  182 (390)
T 1d2f_A          105 RQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPV-ALEKQADGWFCDMGKLEAVLAKP-ECKIMLLCSPQNPTGKVWTCD  182 (390)
T ss_dssp             HHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECEECSSSEECCHHHHHHHHTST-TEEEEEEESSCTTTCCCCCTT
T ss_pred             HHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEe-ecccCCCccccCHHHHHHHhccC-CCeEEEEeCCCCCCCcCcCHH
Confidence            9999999999999999999999999999999999 87644  3457999999999752 259999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCCc-EEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~-~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      ++++|+++|++||+++|+||+|+.+.+++.....   ...+. +. +.|+||.+|++|+|+||++.++  +++.+.+...
T Consensus       183 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~~~~  259 (390)
T 1d2f_A          183 ELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN--SSSRDAYLSA  259 (390)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS--HHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC--HHHHHHHHHH
Confidence            9999999999999999999999998876533221   11221 45 9999999988999999999864  6788888776


Q ss_pred             hc-cCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768          261 QD-NIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       261 ~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      .. ..++ +++.+.+.++..+++...+++++.++.++++++.+.+.|++ ++++.+..+.+++++|++++....+..++.
T Consensus       260 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  339 (390)
T 1d2f_A          260 LKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ  339 (390)
T ss_dssp             HHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHH
T ss_pred             HhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHH
Confidence            55 4454 78899999888888865677888889999999999999988 666677778878888999875323677888


Q ss_pred             HHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..|.+++||.+.||..|+  .++++||+++. +++++++++++|+++++++
T Consensus       340 ~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          340 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV  389 (390)
T ss_dssp             HHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            888757899999998886  46899999997 7899999999999999765

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=4.8e-45  Score=346.62  Aligned_cols=373  Identities=24%  Similarity=0.358  Sum_probs=305.2

Q ss_pred             HHHHhhhcCchHHHHHHHHHh----cCCCeEEcCCCCCCCC--CcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALV   78 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~--~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a   78 (400)
                      +++|+.....+.+.++.+...    .|+++|+|+.|.++..  +++.+.+++.+.+.+..  .. |++..+..+++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la   85 (407)
T 2zc0_A            7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELA   85 (407)
T ss_dssp             SCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHH
T ss_pred             hhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHH
Confidence            667777665555555555433    3458999999886543  67889999988876532  34 877778999999999


Q ss_pred             HHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHH
Q 015768           79 KKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE  156 (400)
Q Consensus        79 ~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~  156 (400)
                      +++.+.+|  +++++|++|+|+++|+..++.++.++||+|+++.|+|+++...++..|++++.+ |.++++  +|++.++
T Consensus        86 ~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~  162 (407)
T 2zc0_A           86 AFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGV-PVDNDG--MRVDLLE  162 (407)
T ss_dssp             HHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHH
T ss_pred             HHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEc-ccCCCC--CCHHHHH
Confidence            99988777  568899999999999999999999999999999999999999999999999999 876654  7999999


Q ss_pred             Hhhc----cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc-CCCcEEEE
Q 015768          157 KTLE----TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV-EGDHVVNL  227 (400)
Q Consensus       157 ~~l~----~~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~-~~~~~i~~  227 (400)
                      +.++    +...+++|+ +++|+||||.++|.+++++|+++|++||+++|+|++|+.+.+++....   .. ..++++++
T Consensus       163 ~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  242 (407)
T 2zc0_A          163 EKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA  242 (407)
T ss_dssp             HHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEE
T ss_pred             HHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEE
Confidence            9987    522358874 668999999999999999999999999999999999998877553221   11 23578999


Q ss_pred             eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--c-HHHHHHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--P-EWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~~l~~~  304 (400)
                      +|+||++| +|+|+||++++   +++++.+.......+++.+++.+.++..+++..  . +++++..+.++++++.+.+.
T Consensus       243 ~s~sK~~~-~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~  318 (407)
T 2zc0_A          243 GTLSKVLG-TGFRIGWIIAE---GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKA  318 (407)
T ss_dssp             EESTTTTC-TTSCCEEEECC---HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHH
T ss_pred             cccccccC-CCcceEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999 99999999998   788888888776667778999999999999864  2 45667778888899999999


Q ss_pred             hcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHH
Q 015768          305 LSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       305 L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      |++ .+.+.+..+.+++++|++++.. .+..++..+|.+++||.+.+|..|.    .++++||+++..+++++++++++|
T Consensus       319 L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l  397 (407)
T 2zc0_A          319 LENHLPNAEFTKPIAGMFVMFFLPEG-ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL  397 (407)
T ss_dssp             HHHHCTTSCBCCCSBSSEEEEECSTT-CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHH
T ss_pred             HHHhCCCCEEecCCCcEEEEEEcCCC-CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence            987 4555666677789999999753 3678899888755599999998875    357999999875799999999999


Q ss_pred             HHHHHHHhc
Q 015768          380 RRGLEELVK  388 (400)
Q Consensus       380 ~~~l~~~~~  388 (400)
                      +++++++..
T Consensus       398 ~~~l~~~~~  406 (407)
T 2zc0_A          398 AKLYKEKFG  406 (407)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHHhc
Confidence            999987643

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=5.9e-46  Score=354.33  Aligned_cols=347  Identities=18%  Similarity=0.240  Sum_probs=298.4

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~  106 (400)
                      ++++++|+.++++++.+|++++++.+.+.+. ...|+..  ..++++++++++.+.++  +++++|++++|+++|++.++
T Consensus        60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~  136 (421)
T 3l8a_A           60 NPELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIAL  136 (421)
T ss_dssp             CTTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHH
T ss_pred             CCCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHH
Confidence            7899999999999999999999999988754 3456433  48999999999999988  66899999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPE  183 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~  183 (400)
                      .++.++||+|+++.|+|+++...++..|.+++.+ |.+  +.++.+|++.+++.++ +++  ++|++++|+||+|.+++.
T Consensus       137 ~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~le~~i~~~~~--~~vil~~p~nptG~~~~~  213 (421)
T 3l8a_A          137 QAFSEKGDAVLINSPVYYPFARTIRLNDHRLVEN-SLQIINGRFEIDFEQLEKDIIDNNV--KIYLLCSPHNPGGRVWDN  213 (421)
T ss_dssp             HHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEE-ECEEETTEEECCHHHHHHHHHHTTE--EEEEEESSBTTTTBCCCH
T ss_pred             HHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEec-cccccCCCeeeCHHHHHHHhhccCC--eEEEECCCCCCCCCcCCH
Confidence            9999999999999999999999999999999998 875  3446689999999997 454  999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      +++++|+++|++||+++|+||+|..+.+++....   ...   .++++++.|+||.+|++|+|+||++.++  +++.+.+
T Consensus       214 ~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~--~~l~~~~  291 (421)
T 3l8a_A          214 DDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN--ESLRRKF  291 (421)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS--HHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC--HHHHHHH
Confidence            9999999999999999999999999887654322   111   3678999999999998999999999886  6788887


Q ss_pred             HHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHH
Q 015768          258 LKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       258 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (400)
                      ..... ...++++++.+.++..+++...+++++..+.++++++++.+.|++++.+.+..+.++++.|++++....+..++
T Consensus       292 ~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l  371 (421)
T 3l8a_A          292 QYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQL  371 (421)
T ss_dssp             HHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHH
T ss_pred             HHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHH
Confidence            76653 33457899999999999987678889999999999999999998876678888888899999997633467788


Q ss_pred             HHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          337 VRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ...|++++||.+.+|..|+.  ++++||+++. +++++++++++|+++++
T Consensus       372 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          372 SEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG  420 (421)
T ss_dssp             HHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            88887678999999998863  6899999995 99999999999998875

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=6.6e-46  Score=354.44  Aligned_cols=373  Identities=24%  Similarity=0.352  Sum_probs=306.1

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +++|+.....+.+.++.+. +.++++|+|+.|.++.  .+++++.+++.+.+.+..  ...|++..+..++++++++++.
T Consensus        21 ~~~~~~~~~~~~~~~~~~~-~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~   99 (425)
T 1vp4_A           21 ISKIGQNMKSSIIREILKF-AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLE   99 (425)
T ss_dssp             CCHHHHTCCCCCHHHHTTT-TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhhhhcCCCcHHHHHHHh-ccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHH
Confidence            6677766555545444433 3467899999987654  367889999988876531  3568777889999999999998


Q ss_pred             hhcC---CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh
Q 015768           83 QENK---LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~---~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l  159 (400)
                      +++|   +++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.++++  +|++.+++.+
T Consensus       100 ~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~~~l  176 (425)
T 1vp4_A          100 RMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDG--MDLNVLERKL  176 (425)
T ss_dssp             HHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHHHHH
T ss_pred             hccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHH
Confidence            8777   668899999999999999999999999999999999999999999999999999 877654  7999999988


Q ss_pred             cc------CCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEe
Q 015768          160 ET------KPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLF  228 (400)
Q Consensus       160 ~~------~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~  228 (400)
                      ++      ...+++|+ +++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++.....    ...+++++++
T Consensus       177 ~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~  256 (425)
T 1vp4_A          177 SEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLN  256 (425)
T ss_dssp             HHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEE
T ss_pred             HhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEe
Confidence            75      11258874 6799999999999999999999999999999999999998875532211    1246789999


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhc
Q 015768          229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      |+||++| +|+|+||++++   +++++.+.......+++.+.+.+.++..+|+..  .+++++.++.++++++.+.+.|+
T Consensus       257 s~sK~~~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~  332 (425)
T 1vp4_A          257 TFSKVLA-PGLRIGMVAGS---KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE  332 (425)
T ss_dssp             ESTTTTC-GGGCEEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-cccceEEEeeC---HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999 99999999998   788888887666556778999999999999864  35677888889999999999998


Q ss_pred             cC-C---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHH
Q 015768          307 PL-G---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADR  378 (400)
Q Consensus       307 ~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~  378 (400)
                      +. +   ++.+..+.+++++|++++.. .+..+++.+|. ++||.+.||..|.    .++++||+++..+++++++++++
T Consensus       333 ~~~~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~l~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~  410 (425)
T 1vp4_A          333 EYFSDIPGVKWVKSEGGLFIWLTLPEG-FDTWEMFEYAK-RKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR  410 (425)
T ss_dssp             HHSTTSTTCEECCCSBSSEEEEECCTT-CCTTTTHHHHH-HHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred             HhCCCCCceEEecCCccEEEEEEcCCC-CCHHHHHHHHH-HCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence            74 3   45666677789999999753 25667888887 5599999998884    36799999987679999999999


Q ss_pred             HHHHHHHHhcc
Q 015768          379 LRRGLEELVKD  389 (400)
Q Consensus       379 l~~~l~~~~~~  389 (400)
                      |+++++++.++
T Consensus       411 l~~~l~~~~~~  421 (425)
T 1vp4_A          411 LREVVLEYGKE  421 (425)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999887654

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=7.6e-46  Score=355.37  Aligned_cols=349  Identities=17%  Similarity=0.157  Sum_probs=299.6

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVN  104 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~  104 (400)
                      .+++++|+|+.+.+++++++++++++.+.+.+.....|++..+.+++++++++++.+.+|+  ++++|++|+|+|++++.
T Consensus        41 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~  120 (437)
T 3g0t_A           41 ATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFV  120 (437)
T ss_dssp             HHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred             hcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHH
Confidence            3578999999999999999999999999887543377888888899999999999988764  57899999999999999


Q ss_pred             HHHHhc--CCCC--EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCcc
Q 015768          105 IVLTLC--DAGD--SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT  179 (400)
Q Consensus       105 ~~~~l~--~~gd--~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~  179 (400)
                      ++.++.  ++||  +|+++.|+|+++...++..|++++.+ |.+++++.+|++.+++.+ ++++  ++|++++|+||||.
T Consensus       121 ~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~~--~~v~l~~p~nptG~  197 (437)
T 3g0t_A          121 SFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESF-DLFEYRGEKLREKLESYLQTGQF--CSIIYSNPNNPTWQ  197 (437)
T ss_dssp             HHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEE-EGGGGCTTHHHHHHHHHHTTTCC--CEEEEESSCTTTCC
T ss_pred             HHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEE-eecCCCCccCHHHHHHHHhcCCc--eEEEEeCCCCCCCC
Confidence            999998  9999  99999999999999999999999999 887778888999999999 4544  99999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-c-------cc-c-CCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768          180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-H-------CC-V-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  249 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~-------~~-~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~  249 (400)
                      +++.+++++|+++|++||+++|+|++|+.+.+++.. .       .. . ..+++++++|+||.+|++|+|+||++.+  
T Consensus       198 ~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--  275 (437)
T 3g0t_A          198 CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMIS--  275 (437)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC--
T ss_pred             cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEEC--
Confidence            999999999999999999999999999987775321 1       11 1 2678899999999999899999999998  


Q ss_pred             cHHHHH-H-----------------HHHhhccCCcCccHHHHHHHHHHhcCCcHH---HHHHHHHHHHHHHHHHHHhccC
Q 015768          250 VEGFAT-Q-----------------LLKVQDNIPICASIISQHLALYSLQTGPEW---VTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       250 ~~~~~~-~-----------------l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                       +++++ .                 +.......+++++.+.+.++..+|+....+   ..++++++.++++.+.+.|+++
T Consensus       276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  354 (437)
T 3g0t_A          276 -GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN  354 (437)
T ss_dssp             -HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence             77777 6                 665555557788999999999999863333   7888999999999999999998


Q ss_pred             CCCccc-------CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCC--CeEEEEeccCCHHHHHHHHHHH
Q 015768          309 GEGAVK-------GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       309 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~--~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      + +.+.       ++.+++++|++++  ..+..++...|. ++||.+.|+..|+..  +++||+++..+++++++++++|
T Consensus       355 g-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l  430 (437)
T 3g0t_A          355 G-FNIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRL  430 (437)
T ss_dssp             T-EEESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHH
T ss_pred             C-CEEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence            4 3555       3367899999998  247888998886 679999999888643  7899999977899999999999


Q ss_pred             HHHHHH
Q 015768          380 RRGLEE  385 (400)
Q Consensus       380 ~~~l~~  385 (400)
                      ++++++
T Consensus       431 ~~~~~~  436 (437)
T 3g0t_A          431 QMLNAE  436 (437)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            988753

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=2.8e-45  Score=350.02  Aligned_cols=365  Identities=20%  Similarity=0.265  Sum_probs=295.7

Q ss_pred             HHHHhhhcCchHHHHHHHHHhc-CCCeEEcCCCCCCCCCcHH-HH--------------HHHHHhhcCCCCCCCCCCCCc
Q 015768            7 LAKRALETEMPIMVQIQELVRG-AKNAVSLAQGVVYWQPPKM-AM--------------EKVKELVWDPSISKYGADEGL   70 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~-v~--------------~a~~~~~~~~~~~~y~~~~g~   70 (400)
                      +|+|+.....+.+.++.+.... ++++|+|+.|.++...+|. .+              ++..+      ...|++..|.
T Consensus         7 ~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~   80 (425)
T 2r2n_A            7 ITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR------ALQYSPSAGI   80 (425)
T ss_dssp             SCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH------HTSCCCTTCC
T ss_pred             HHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh------hcCCCCCCCC
Confidence            6888887666666666666554 3789999999987642221 00              11111      2458888999


Q ss_pred             HHHHHHHHHHHHhhcCCCC---------CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEec
Q 015768           71 PELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG  141 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~---------~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~  141 (400)
                      +++|+++++++.+.+|++.         ++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|++++.+ 
T Consensus        81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-  159 (425)
T 2r2n_A           81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINV-  159 (425)
T ss_dssp             HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEE-
T ss_pred             HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-
Confidence            9999999999999888753         699999999999999999999999999999999999999999999999999 


Q ss_pred             cCCCCCCCCCHHHHHHhhccC----------CCCeEEEE-eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768          142 PCSSKTLHPDADWLEKTLETK----------PTPKLVSV-VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM  210 (400)
Q Consensus       142 ~~~~~~~~~~~e~l~~~l~~~----------~~~~~v~l-~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~  210 (400)
                      |.++++  +|++.|++.++..          ..+++|++ .+|+||||.+++.+++++|+++|++||+++|+||+|+.+.
T Consensus       160 ~~~~~~--~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~  237 (425)
T 2r2n_A          160 ASDESG--IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ  237 (425)
T ss_dssp             CEETTE--ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred             CcCCCC--CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence            887654  6999999988721          23588876 5899999999999999999999999999999999999888


Q ss_pred             cCCCCc---cc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC---
Q 015768          211 YDGRKH---CC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---  283 (400)
Q Consensus       211 ~~~~~~---~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---  283 (400)
                      +++...   .. ...+++++++|+||.++ +|+|+||++.+   +++++.+.......+++++.+.+.++..+|+..   
T Consensus       238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~  313 (425)
T 2r2n_A          238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP---KPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEE  313 (425)
T ss_dssp             SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE---HHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccc
Confidence            765322   11 22467899999999998 99999999999   788898888777677889999999999998751   


Q ss_pred             --cHHHHHHHHHHHHHHHHHHHHhcc-CCCC-cccCCCCceEEEeeCCCCCCCHHH-HHHHHHHhcCeEEeCCCccCC--
Q 015768          284 --PEWVTERVKDLVRNREIIREALSP-LGEG-AVKGGEGAIYLWARLPEKHLDDFE-VVRWLAHRHGVVVIPGGACGC--  356 (400)
Q Consensus       284 --~~~~~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gi~v~~g~~~~~--  356 (400)
                        .++..++++.++++++.+.+.|++ +++. .+..|.+++|+|++++... +..+ +...+ .++||.+.||..|+.  
T Consensus       314 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~l-~~~gv~v~pg~~f~~~~  391 (425)
T 2r2n_A          314 GFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN-DVKELIEEKA-VKMGVLMLPGNAFYVDS  391 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS-CCHHHHHTHH-HHTTEECEEGGGGSSST
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC-CHHHHHHHHH-HHCCcEEechhhhcCCC
Confidence              256777888889999999999987 4543 4566778999999998643 4455 45545 589999999998863  


Q ss_pred             ---CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          357 ---RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       357 ---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                         .+++||+++..+++++++++++|++++++.
T Consensus       392 ~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~  424 (425)
T 2r2n_A          392 SAPSPYLRASFSSASPEQMDVAFQVLAQLIKES  424 (425)
T ss_dssp             TSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence               479999998559999999999999998764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=1.1e-44  Score=345.07  Aligned_cols=355  Identities=21%  Similarity=0.290  Sum_probs=292.9

Q ss_pred             CCCeEEcCCCCC----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh------hcC--CCCCcEEEeC
Q 015768           29 AKNAVSLAQGVV----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ------ENK--LYKSSVMVTA   96 (400)
Q Consensus        29 ~~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~------~~~--~~~~~i~~~~   96 (400)
                      .+++|+|+.|.+    .+++++.+++++.+.+.+.....|++..+..++++++++++.+      ..|  +++++|++|+
T Consensus        32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~  111 (416)
T 1bw0_A           32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS  111 (416)
T ss_dssp             CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred             CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence            367999999985    4678999999999998765456787777899999999999973      133  5688999999


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768           97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus        97 g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                      |+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.+++ ++.+|++.+++.+++++  +++++++|+|
T Consensus       112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~i~~p~n  188 (416)
T 1bw0_A          112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFY-NCRPENDWEADLDEIRRLKDDKT--KLLIVTNPSN  188 (416)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTE--EEEEEESSCT
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEe-ecCcccCCCCCHHHHHHHhccCC--eEEEEeCCCC
Confidence            99999999999999999999999999999999999999999988 77644 56789999999997654  8999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC----Ccccc----CCCcEEEEeccccccCCCcceeEEEEcc
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR----KHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      |||.++|.+++++|+++|++||+++|+||+|..+.+++.    .....    ..+++++++|+||.++++|+|+||++++
T Consensus       189 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~  268 (416)
T 1bw0_A          189 PCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYV  268 (416)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEE
T ss_pred             CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEee
Confidence            999999999999999999999999999999999877654    22111    1345788999999998899999999987


Q ss_pred             CC---cHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768          248 SE---VEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  323 (400)
Q Consensus       248 ~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  323 (400)
                      +.   .+.+...+.... ..+++++.+.+.++..+|+. ..+++++..++++++++++.+.|++++++.+..+.+++|+|
T Consensus       269 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~  347 (416)
T 1bw0_A          269 DPHGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLM  347 (416)
T ss_dssp             CTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEE
T ss_pred             CchhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence            41   112333333221 13567889999999999985 34678888999999999999999988665666677789999


Q ss_pred             eeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          324 ARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       324 ~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++..    ..+..+++.+|++++||.+.||..|+.++++||+++. +++++++++++|.+++++..+
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~~~  415 (416)
T 1bw0_A          348 SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-PVEVYREAVERIKAFCQRHAA  415 (416)
T ss_dssp             EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHHBC
T ss_pred             EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence            888631    1357788888876899999999988888999999984 899999999999999987543

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=6.2e-45  Score=344.72  Aligned_cols=366  Identities=23%  Similarity=0.358  Sum_probs=301.5

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +|+|+.....+.+.++.+.. .++++|+|+.|.++.  .+++.+.+++.+.+.+..  ...|++..+..++++++++++ 
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~-   87 (397)
T 2zyj_A           10 FGKGAGRIQASTIRELLKLT-QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI-   87 (397)
T ss_dssp             SCGGGGGCCCCHHHHHHHHH-TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH-
T ss_pred             hhhhhcccCchHHHHHHhhc-cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh-
Confidence            66777666555555555543 357899999987554  367889999888876421  356877778999999999998 


Q ss_pred             hhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768           83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus        83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                         |+++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++++  +|++++++.+++.
T Consensus        88 ---g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~--~d~~~l~~~l~~~  161 (397)
T 2zyj_A           88 ---GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PDLDALEEVLKRE  161 (397)
T ss_dssp             ---TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHHC
T ss_pred             ---CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEec-CcCCCC--CCHHHHHHHHhhc
Confidence               6778999999999999999999999999999999999999999999999999998 876654  7999999999752


Q ss_pred             CCCeEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c-CC---CcEEEEecccccc
Q 015768          163 PTPKLV-SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V-EG---DHVVNLFSFSKAY  234 (400)
Q Consensus       163 ~~~~~v-~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~-~~---~~~i~~~s~sK~~  234 (400)
                      . +++| ++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.....   . ..   +++++++|+||++
T Consensus       162 ~-~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~  240 (397)
T 2zyj_A          162 R-PRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVL  240 (397)
T ss_dssp             C-CSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTT
T ss_pred             C-CeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccc
Confidence            2 4887 46799999999999999999999999999999999999998875532111   1 12   6779999999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhcc-CC-CC
Q 015768          235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSP-LG-EG  311 (400)
Q Consensus       235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~~-~~  311 (400)
                      | +|+|+||++++   +++++.+.......+++.+.+.+.++..+|+... ++.++..+.++++++.+.+.|++ ++ ++
T Consensus       241 ~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~  316 (397)
T 2zyj_A          241 S-PGLRVAFAVAH---PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEV  316 (397)
T ss_dssp             C-GGGCCEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred             c-ccceeEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence            9 99999999998   7888888776655566778999999999998743 56778888889999999999987 45 35


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .+..+.+++++|++++.. .+..++..+|. ++||.+.+|..|.    .++++||+++..+++++++++++|+++++++.
T Consensus       317 ~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~  394 (397)
T 2zyj_A          317 RYTRPKGGMFVWMELPKG-LSAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLL  394 (397)
T ss_dssp             EECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEccCCccEEEEEEcCCC-CCHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            666677789999999753 36778888887 5699999998885    46899999997679999999999999998775

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=3.7e-44  Score=334.13  Aligned_cols=334  Identities=20%  Similarity=0.246  Sum_probs=284.9

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      .+++++|+|+.+.+++++|+++++++.+.+.+  ...| +..+.+++++++++++    +++++++++|+|++++++.++
T Consensus        13 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~~~a~~~~~   85 (354)
T 3ly1_A           13 PSTDNPIRINFNENPLGMSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHH----QVEAPSILLTAGSSEGIRAAI   85 (354)
T ss_dssp             CCSSSCEECSSCCCSSCCCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHT----TSCGGGEEEESHHHHHHHHHH
T ss_pred             CCCCceEEccCCCCCCCCCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHh----CCChHHEEEeCChHHHHHHHH
Confidence            45688999999999999999999999998875  4566 4456677777777776    788899999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      .++.++||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++.++....+++|++++|+||||.++|.+++
T Consensus        86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  163 (354)
T 3ly1_A           86 EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKV-KMLDN-WAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVI  163 (354)
T ss_dssp             HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CCCTT-SCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHH
T ss_pred             HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHH
Confidence            9999999999999999999999999999999999 88754 578999999999832224999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCccc----cCC-CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  261 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~-~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~  261 (400)
                      .+|+++| +||+++|+|++|+.+.+++.....    ... +++++++|+||.+|++|+|+||++.+   +++++.+....
T Consensus       164 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~  239 (354)
T 3ly1_A          164 EPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH---PTVIALMGRYV  239 (354)
T ss_dssp             HHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC---HHHHHHHGGGT
T ss_pred             HHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC---HHHHHHHHHhc
Confidence            9999988 799999999999988876532221    123 78899999999999899999999998   88888888776


Q ss_pred             ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      .  .++++.+.+.++..+|+. .+++.+++++++++++++.+.|++++. .+.++. ++|+|++++.   +..++...|.
T Consensus       240 ~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~-~~~~~~~~~~---~~~~~~~~l~  311 (354)
T 3ly1_A          240 A--GEKINFSGVDAALASMND-SAFITYSKKSNDVSRQILLKALEDLKL-PYLPSE-GNFVFHQLVV---PLKDYQTHMA  311 (354)
T ss_dssp             T--CSCCCHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCC-SSEEEEECSS---CHHHHHHHHH
T ss_pred             C--CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCC-ceEEEEECCC---CHHHHHHHHH
Confidence            5  378899999999999986 477888999999999999999998853 555554 7789999975   5788888876


Q ss_pred             HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          342 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                       ++||.+. |..++.++++||+++  +++++++++++|++++++
T Consensus       312 -~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          312 -DAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             -HTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred             -HCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence             7899999 777777899999987  689999999999998864

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=4.8e-44  Score=335.04  Aligned_cols=332  Identities=20%  Similarity=0.306  Sum_probs=286.2

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .+++|+|+.+.+++++|+++++++.+.+.+.....|+. .+..++++++++++    |+ +++++++|+|+|++++.++.
T Consensus        29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~  103 (367)
T 3euc_A           29 SHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM----QVPAGMEVLLGNGSDEIISMLAL  103 (367)
T ss_dssp             CTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH----TCCTTCEEEEEEHHHHHHHHHHH
T ss_pred             CCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh----CCCCcceEEEcCCHHHHHHHHHH
Confidence            36799999999999999999999999887433556744 57889999999987    66 67899999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      ++.++||+|+++.|+|+++...++..|++++.+ |.++ ++.+|++.+++.+++ ++  ++|++++|+||||.+++.+++
T Consensus       104 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~~~~l  179 (367)
T 3euc_A          104 AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGV-PLRA-DFTLDRGAMLAAMAEHQP--AIVYLAYPNNPTGNLFDAADM  179 (367)
T ss_dssp             HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEE-ECCT-TSCCCHHHHHHHHHHHCC--SEEEEESSCTTTCCCCCHHHH
T ss_pred             HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-cCCC-CCCCCHHHHHHHhhccCC--CEEEEcCCCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999 8876 457899999999986 55  999999999999999999999


Q ss_pred             HHHHHHHHHc--CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          187 KRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       187 ~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      ++|+++|++|  |+++|+|++|+.+...+........+.+++++|+||. +++|+|+||++.+   +++++.+.....  
T Consensus       180 ~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~---~~~~~~~~~~~~--  253 (367)
T 3euc_A          180 EAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD---PQWLEQLDKVRP--  253 (367)
T ss_dssp             HHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC---HHHHHHHGGGCC--
T ss_pred             HHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeC---HHHHHHHHHhCC--
Confidence            9999999999  9999999999987654332233346788999999999 8899999999998   788888876654  


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      +++.+.+.+.++..+|+. .+++.+..+++.++++++.+.|++++++.+.++ .++++|++++    +..++...| .++
T Consensus       254 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~----~~~~l~~~l-~~~  326 (367)
T 3euc_A          254 PYNVNVLTEATALFALEH-VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPS-AANFLLARVP----DAAQTFDRL-LAR  326 (367)
T ss_dssp             SSCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCC-SSSEEEEECS----CHHHHHHHH-HTT
T ss_pred             CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC-CCeEEEEECC----CHHHHHHHH-HHC
Confidence            667899999999999987 677889999999999999999999866565544 4888999987    577888877 589


Q ss_pred             CeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       345 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ||.+.+|..|.  .++++|++++  +++++++++++|+++++
T Consensus       327 gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~  366 (367)
T 3euc_A          327 KVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASLQ  366 (367)
T ss_dssp             TEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred             CeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHhc
Confidence            99999998875  4689999987  69999999999988753

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=3.8e-44  Score=335.50  Aligned_cols=330  Identities=19%  Similarity=0.256  Sum_probs=284.2

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      +.+++|+|+.+.+++++++.+++++.+.+..  ...|+...+ .++++++++++    |+++++|++|+|++++++.++.
T Consensus        28 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~v~~~~g~~~a~~~~~~  100 (365)
T 3get_A           28 GVKEVIKLASNENPFGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY----KVQNENIIIGAGSDQVIEFAIH  100 (365)
T ss_dssp             TCSCCEECSSCCCTTCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred             CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence            4588999999999999999999999998874  556765555 88999999887    7788999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      ++.++||+|+++.|+|+++...++..|++++.+ |.+++++ +|++++++.+++++  ++|++++|+||||.++|.+++.
T Consensus       101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~d~~~l~~~l~~~~--~~v~~~~p~nptG~~~~~~~l~  176 (365)
T 3get_A          101 SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKT-QSITHNL-DEFKKLYETHKDEI--KLIFLCLPNNPLGECLDASEAT  176 (365)
T ss_dssp             HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEEC-SSSSCCH-HHHHHHHHHTTTTE--EEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecCCCCC-CCHHHHHHHhCCCC--CEEEEcCCCCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999 8744556 89999999998554  9999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEccccccccc--CCCC-ccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMY--DGRK-HCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~--~~~~-~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      +|+++| ++|+++|+|++|+.+.+  .+.. ...    ...+++++++|+||.+|++|+|+||++.+   +++++.+...
T Consensus       177 ~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~  252 (365)
T 3get_A          177 EFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN---ANIISAFYKL  252 (365)
T ss_dssp             HHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC---HHHHHHHHHH
T ss_pred             HHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC---HHHHHHHHHh
Confidence            999888 57999999999998874  3221 111    13578899999999999899999999997   8899988876


Q ss_pred             hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHH
Q 015768          261 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL  340 (400)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  340 (400)
                      ..  +++++.+.+.++..+|+. .+++++.+++++++++++.+.|++++ +.+.++. +.|+|++++..  +..++...|
T Consensus       253 ~~--~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~-~~~~~~~~~~~--~~~~~~~~l  325 (365)
T 3get_A          253 RA--PFNVSNLALKAAVAAMDD-DEFTEKTLENNFSQMELYKEFAKKHN-IKIIDSY-TNFITYFFDEK--NSTDLSEKL  325 (365)
T ss_dssp             SC--TTCSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCS-SSEEEEECSSS--CHHHHHHHH
T ss_pred             cC--CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCC-CeEEEEECCCC--CHHHHHHHH
Confidence            65  467899999999999986 47788999999999999999999884 4666555 67789999864  678888888


Q ss_pred             HHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          341 AHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       341 ~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      . ++||.+.+|..|+ ++++|++++  ++++++++++.|++++
T Consensus       326 ~-~~gi~v~~g~~~~-~~~iRis~~--~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          326 L-KKGIIIRNLKSYG-LNAIRITIG--TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             H-TTTEECEECGGGT-CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred             H-HCCEEEEECccCC-CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence            6 6899999999888 899999998  6899999999998875

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=1e-43  Score=332.34  Aligned_cols=329  Identities=19%  Similarity=0.256  Sum_probs=282.4

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      +.+++|+|+.+.+++++++++++++.+.+..  ...| +..+..++++++++++    +++++++++|+|++++++.++.
T Consensus        30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~v~~~~g~t~a~~~~~~  102 (363)
T 3ffh_A           30 GLTKITKLSSNENPLGTSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFY----QLEEEELIFTAGVDELIELLTR  102 (363)
T ss_dssp             TCSCCEECSSCSCTTCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred             CCCceEEccCCCCCCCCCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHh----CCChhhEEEeCCHHHHHHHHHH
Confidence            4578999999999999999999999987754  4456 4567889999999988    6788999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      ++.++||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++.+++++  ++|++++|+||||.++|.+++.
T Consensus       103 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~p~nptG~~~~~~~l~  178 (363)
T 3ffh_A          103 VLLDTTTNTVMATPTFVQYRQNALIEGAEVREI-PLLQD-GEHDLEGMLNAIDEKT--TIVWICNPNNPTGNYIELADIQ  178 (363)
T ss_dssp             HHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEE-ECCTT-SCCCHHHHHHHCCTTE--EEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHccCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCCC-CCcCHHHHHHhcccCC--CEEEEeCCCCCcCCCcCHHHHH
Confidence            999999999999999999999999999999999 88753 5789999999998655  9999999999999999988888


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      +|++.|++ |+++|+|++|+.+.+ +...    .....+++++++|+||.+|++|+|+||++.+   +++++.+..... 
T Consensus       179 ~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~-  252 (363)
T 3ffh_A          179 AFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD---KEIIRQLNIVRP-  252 (363)
T ss_dssp             HHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC---HHHHHHHHHTCC-
T ss_pred             HHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC---HHHHHHHHHhCC-
Confidence            88887776 999999999998876 3211    1223678899999999999899999999997   899998887765 


Q ss_pred             CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768          264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                       +++++.+.+.++..+|+. .+++++..++++++++++.+.|+++.++.+.++. ++|+|++++.   +..++...|. +
T Consensus       253 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~---~~~~~~~~l~-~  325 (363)
T 3ffh_A          253 -PFNTTSIGQKLAIEAIKD-QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI---EAGTIFSYLE-K  325 (363)
T ss_dssp             -SCCCBHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCC-SSEEEEECSS---CHHHHHHHHH-H
T ss_pred             -CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCC-CeEEEEECCC---CHHHHHHHHH-H
Confidence             678999999999999985 4778889999999999999999985455666555 7788999974   6788888886 7


Q ss_pred             cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +||.+.+|..|+.++++|++++  +++++++++++|+++
T Consensus       326 ~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          326 NGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKL  362 (363)
T ss_dssp             TTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             CCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHh
Confidence            8999999999988999999998  699999999999875

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=6.8e-45  Score=348.00  Aligned_cols=346  Identities=17%  Similarity=0.233  Sum_probs=289.7

Q ss_pred             CCCeEEcCCCCC-CCCCcHHH--HHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc-CCCCCc---EEEeCChHHH
Q 015768           29 AKNAVSLAQGVV-YWQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSS---VMVTAGANQA  101 (400)
Q Consensus        29 ~~~~i~~~~~~~-~~~~~~~v--~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~-~~~~~~---i~~~~g~t~a  101 (400)
                      .+++++|+.|.+ +++.++.+  ++++.+.+.......|++..|..++++++++++.+.+ ++++++   |++|+|+++|
T Consensus        46 ~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~a  125 (430)
T 2x5f_A           46 KSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHG  125 (430)
T ss_dssp             TTCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHH
T ss_pred             CCCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHH
Confidence            467999999999 88777766  7776666543235678777789999999999997775 556788   9999999999


Q ss_pred             HHHHHHHhcCCCCEEEEeCCCccchhHHHHh-cCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCcc
Q 015768          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGT  179 (400)
Q Consensus       102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~  179 (400)
                      ++.++.++.++||+|+++.|+|+++...++. .|++++.+ |.+++++.+|++.+++.+++. ..++++++++|+||||.
T Consensus       126 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~  204 (430)
T 2x5f_A          126 LSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTY-PIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGY  204 (430)
T ss_dssp             HHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEE-CCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCC
T ss_pred             HHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEE-eccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCC
Confidence            9999999999999999999999999999999 99999999 887633568999999998751 12489999999999999


Q ss_pred             CCCHHHHHHHHHHHHH-----cCCEEEEcccccccccCCCCcc----cc-C-CCc---EEEEeccccccCCCcceeEEEE
Q 015768          180 YIPERLLKRISDLCKA-----AGSWLVVDNTYEYFMYDGRKHC----CV-E-GDH---VVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~-----~~~~li~D~a~~~~~~~~~~~~----~~-~-~~~---~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      +++.+++++|+++|++     ||+++|+||+|+.+.+++.+..    .. . .++   +++++|+||.+|++|+|+||++
T Consensus       205 ~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~  284 (430)
T 2x5f_A          205 TPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMT  284 (430)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEE
T ss_pred             cCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEE
Confidence            9999999999999999     9999999999999887654211    11 2 567   8999999999988999999999


Q ss_pred             c---cCCcHHHHHHHHHhhcc----CCcCccHHHHHHHHHHhc-CCcHHHHH---HHHHHHHHHHHHHHHhc----cCCC
Q 015768          246 Y---PSEVEGFATQLLKVQDN----IPICASIISQHLALYSLQ-TGPEWVTE---RVKDLVRNREIIREALS----PLGE  310 (400)
Q Consensus       246 ~---~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~l~-~~~~~~~~---~~~~~~~~~~~l~~~L~----~~~~  310 (400)
                      .   +   +++++.+......    .+++++.+.+.++..+|+ .. ++.++   ..+.++++++.+.+.|+    +.+ 
T Consensus       285 ~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-  359 (430)
T 2x5f_A          285 FGTSD---QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-  359 (430)
T ss_dssp             EBCCC---HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-
T ss_pred             EecCC---HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-
Confidence            8   6   7888888766544    567889999999999998 63 44445   88889999999999998    454 


Q ss_pred             CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.+..+.+++|+|++++ . .+..+++.+|.+++||.+.||    .++++||+++..+++++++++++|+++++++
T Consensus       360 ~~~~~~~~g~~~~~~~~-~-~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~  429 (430)
T 2x5f_A          360 WQAYDFNSGYFMAIKVH-D-VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIAKAIDDL  429 (430)
T ss_dssp             EEECCCCBSSEEEEEES-S-SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred             ceeeCCCceEEEEeCCC-C-CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            46677777899999997 2 467889998875599999997    4689999999558999999999999998765

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=3.6e-44  Score=344.94  Aligned_cols=342  Identities=22%  Similarity=0.351  Sum_probs=283.2

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      ++++|+|+.|+++++.++.+++++.+.+.+    .....|++..+.+++++++++++..-.++++++|++|+|+++++..
T Consensus        68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~  147 (449)
T 3qgu_A           68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIAR  147 (449)
T ss_dssp             TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred             CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHH
Confidence            678999999999999999999999988873    3355787778999999999999871114568899999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcE----------EEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT----------HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      + .++.++||+|+++.|+|+++...++..|.+          ++.+ |.+++ ++..+++.+     ++  +++|++++|
T Consensus       148 ~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~--~~~v~l~~p  218 (449)
T 3qgu_A          148 I-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYM-VCNPDNHFFPDLSKA-----KR--TDIIFFCSP  218 (449)
T ss_dssp             H-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEE-ECCGGGTTCCCGGGC-----CC--CSEEEEESS
T ss_pred             H-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEE-ecccccCCcCChhHc-----CC--CCEEEEeCC
Confidence            8 888899999999999999999999999988          8888 87755 455554321     23  599999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      +||||.+++.+++++|+++|++||+++|+||+|+.+.+++.....   .  ..++++++.|+||.+|++|+|+||++.++
T Consensus       219 ~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  298 (449)
T 3qgu_A          219 NNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPK  298 (449)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCT
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCH
Confidence            999999999999999999999999999999999998876532211   1  14678999999999999999999999984


Q ss_pred             CcHHHHH--------HHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          249 EVEGFAT--------QLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       249 ~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                         ++++        .+.........+++.+.+.++..+++. +.++.+++.++++++++++.+.|++++. .+..+.++
T Consensus       299 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~  374 (449)
T 3qgu_A          299 ---ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDDA  374 (449)
T ss_dssp             ---TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEESSSS
T ss_pred             ---HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC-eeeCCCCe
Confidence               3332        344444444567899999999999885 3467788899999999999999999854 67777779


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++|+.++  ..+..+++.+|++++||.+.||..|+  .++++||++.. +++++++++++|++++++-
T Consensus       375 ~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~  440 (449)
T 3qgu_A          375 PYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEAYGKR  440 (449)
T ss_dssp             SEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHC--
T ss_pred             eEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence            99999998  34788899888877799999999886  36899999876 9999999999999887653

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=5.4e-44  Score=341.99  Aligned_cols=344  Identities=23%  Similarity=0.355  Sum_probs=280.5

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      +++++|+|+.++++++.|+.+++++.+.+.+    .....|++..+..++++++++++.+.+++++++|++|+|+++++.
T Consensus        54 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~  133 (432)
T 3ei9_A           54 PDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDIS  133 (432)
T ss_dssp             TTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred             CCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHH
Confidence            3568999999999999999999999988863    224568777899999999999998666778899999999999999


Q ss_pred             HHHHHhcCCCCEEEEeCCCccchhHHHHhcCc------------EEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEE
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSV  170 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l  170 (400)
                      .+ ..+.++||+|+++.|+|+++...++..|.            +++.+ |.+++ ++..+++.     .++  +++|++
T Consensus       134 ~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~-----~~~--~~~v~l  204 (432)
T 3ei9_A          134 RL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYM-RCTPENGFFPDLST-----VGR--TDIIFF  204 (432)
T ss_dssp             HH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEE-ECCGGGTTSCCGGG-----CCC--CSEEEE
T ss_pred             HH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEe-ccCcccCCcCChhh-----CCC--CCEEEE
Confidence            74 77788999999999999999998888773            56777 76643 34445332     123  599999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEc
Q 015768          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      ++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.+....    ..+++++++|+||.+|++|+|+||+++
T Consensus       205 ~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~  284 (432)
T 3ei9_A          205 CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVI  284 (432)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEEC
T ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEE
Confidence            9999999999999999999999999999999999999987764332211    236789999999999999999999999


Q ss_pred             cCCc-----HHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768          247 PSEV-----EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  320 (400)
Q Consensus       247 ~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  320 (400)
                      ++..     ..+.+.+.........+++.+.+.++..++.. +.++++++++.++++++.+.+.|++++ +.+..+.+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~  363 (432)
T 3ei9_A          285 PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLG-YDVYGGKNAP  363 (432)
T ss_dssp             CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEECSSSS
T ss_pred             ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcce
Confidence            8421     00256666655545667889999998888863 346788889999999999999999885 4666666789


Q ss_pred             EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      |+|+.++.  .+..+++.++++++||.+.||..|+  +++++||++.. +++++++++++|++--+
T Consensus       364 ~~~~~~~~--~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~rl~~~~~  426 (432)
T 3ei9_A          364 YVWVHFPN--QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILEACRRFKQLYK  426 (432)
T ss_dssp             EEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred             EEEEECCC--CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHhh
Confidence            99999983  3678888888877899999999886  37899999975 99999999999987544

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=4.2e-44  Score=337.55  Aligned_cols=357  Identities=15%  Similarity=0.172  Sum_probs=282.1

Q ss_pred             HHhhhcCchHHHHHHHHHhc--CCCeEEcCCCCC---C--CCCcHHHHHHHHHhh-cCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            9 KRALETEMPIMVQIQELVRG--AKNAVSLAQGVV---Y--WQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~---~--~~~~~~v~~a~~~~~-~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      .++.....+...++.+.++.  .++.|+|+.|.+   +  +.+++.+.++.. .. ..+....|++..|.+++|++++++
T Consensus         6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~   84 (405)
T 3k7y_A            6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNL   84 (405)
T ss_dssp             GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHH
T ss_pred             hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHH
Confidence            46666666666777776654  367999999962   2  345677777766 43 333467899999999999999999


Q ss_pred             HHhhcCC--CCCc--EEEeCChHHHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHH
Q 015768           81 LNQENKL--YKSS--VMVTAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDAD  153 (400)
Q Consensus        81 l~~~~~~--~~~~--i~~~~g~t~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e  153 (400)
                      +.+.++.  ++++  +++|+|+++|+..++.++.+  | |+|++++|+|+++...++..|++++.+ |. +++++.+|++
T Consensus        85 ~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~  162 (405)
T 3k7y_A           85 IFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYI-NFFDYNLIDINYD  162 (405)
T ss_dssp             HHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEE-CCEETTTTEECHH
T ss_pred             HcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEE-eccccccCCcCHH
Confidence            9776653  3554  69999999999999999987  8 999999999999999999999999999 88 4556788999


Q ss_pred             HHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----cc--ccCCCcEE
Q 015768          154 WLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HC--CVEGDHVV  225 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~--~~~~~~~i  225 (400)
                      .+++.++..+..+++++++| |||||.+++.+++++|+++|++||+++|+||+|.++.+++..     ..  ....++++
T Consensus       163 ~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i  242 (405)
T 3k7y_A          163 LFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFS  242 (405)
T ss_dssp             HHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEE
T ss_pred             HHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEE
Confidence            99999874332478888755 899999999999999999999999999999999999875321     11  12346899


Q ss_pred             EEeccccccCCCcceeEEEEc--cCCcHHHHHHHH----HhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVKD  293 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~--~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~  293 (400)
                      +++||||.||++|+|+||++.  ++  +++++++.    ........+++.+.+.++..+|+..      .+++.+++++
T Consensus       243 ~~~S~SK~~~l~GlRiG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~  320 (405)
T 3k7y_A          243 VCQSFSKNMSLYGERAGALHIVCKN--QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQR  320 (405)
T ss_dssp             EEEECTTTSCCTTTTEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEeeCCccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999864  33  66655543    2222233456788888888888763      1335566778


Q ss_pred             HHHHHHHHHHHhc----cCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768          294 LVRNREIIREALS----PLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  366 (400)
Q Consensus       294 ~~~~~~~l~~~L~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~  366 (400)
                      ++++++.+.+.|+    +++.   +.+..+++|+|+|+.++.      +++.+| +++||.+.||.        |||++.
T Consensus       321 ~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~------~~~~~L-~~~gV~v~p~~--------Ris~a~  385 (405)
T 3k7y_A          321 ITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA------KIAEHL-KTHHIYIINNG--------RINVSG  385 (405)
T ss_dssp             HHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG------GGTTTT-TTTTEECCTTS--------EEEGGG
T ss_pred             HHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH------HHHHHH-HHCCEeecCCC--------eEEEec
Confidence            9999999999999    7753   467788999999998863      345567 79999999964        999987


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 015768          367 LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~~  385 (400)
                      .++++++.++++|+++++.
T Consensus       386 ~~~~~i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          386 ITKNNVDYIADKICLSLSQ  404 (405)
T ss_dssp             CCTTHHHHHHHHHHHHHHC
T ss_pred             cCHHHHHHHHHHHHHHHhh
Confidence            7899999999999999864

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=1.3e-43  Score=333.06  Aligned_cols=326  Identities=19%  Similarity=0.286  Sum_probs=280.3

Q ss_pred             HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH
Q 015768           51 KVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF  130 (400)
Q Consensus        51 a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~  130 (400)
                      ++.+.+.+. ...|++..|..++++++++++.   +++++++++|+|+++|+..++.++.++||+|+++.|+|+++...+
T Consensus        47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~  122 (375)
T 3op7_A           47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT---GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIP  122 (375)
T ss_dssp             HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS---SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHH
T ss_pred             HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc---cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH
Confidence            455555554 4668888899999999999873   567899999999999999999999999999999999999999999


Q ss_pred             HhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768          131 QMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF  209 (400)
Q Consensus       131 ~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~  209 (400)
                      +..|++++.+ |.+ ++++.+|++.+++.+++++  ++|++++|+||||.++|.+++++|.++|++||+++|+||+|+.+
T Consensus       123 ~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~  199 (375)
T 3op7_A          123 KSLGAEVDLW-QIEEENGWLPDLEKLRQLIRPTT--KMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF  199 (375)
T ss_dssp             HHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTC--CEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred             HHcCCEEEEE-eccccCCCCCCHHHHHHhhccCC--eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence            9999999998 776 4567789999999998655  99999999999999999999999999999999999999999988


Q ss_pred             ccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHH
Q 015768          210 MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE  289 (400)
Q Consensus       210 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  289 (400)
                      .+++........+++++++|+||.+|++|+|+||++++   +++++.+.......+++++.+.+.++..+++..+++.++
T Consensus       200 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  276 (375)
T 3op7_A          200 SELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAAN---HQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILER  276 (375)
T ss_dssp             SSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECC---HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred             cccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeC---HHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHH
Confidence            76532222223577899999999998899999999997   899999988887778888999999999888865566778


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCH
Q 015768          290 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE  369 (400)
Q Consensus       290 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~  369 (400)
                      .++.++++++.+.+.|++.+.+.+..+.++++.|+.++.. .+..+++.++++++||.+.||..|+.++++|++++. +.
T Consensus       277 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~  354 (375)
T 3op7_A          277 NRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC-EQ  354 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS-CH
T ss_pred             HHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC-CH
Confidence            8888899999999999988776777777788888887654 367888888877899999999999889999999997 67


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 015768          370 DDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       370 ~~~~~~~~~l~~~l~~~~~  388 (400)
                      +++++++++|.++++++.+
T Consensus       355 ~~i~~~l~~l~~~l~~~~~  373 (375)
T 3op7_A          355 ETLIKGLEKLSQFLRRFDK  373 (375)
T ss_dssp             HHHHHHHHHHHHHHGGGC-
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            9999999999999987654

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=1.4e-43  Score=344.17  Aligned_cols=342  Identities=23%  Similarity=0.314  Sum_probs=280.6

Q ss_pred             CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhc-CCCCEEE
Q 015768           44 PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVV  117 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vl  117 (400)
                      .|+++++++.+.+.+.   ....|++..|..++++++++++.+.+|  +++++|++|+|+++++..++.++. ++||+|+
T Consensus       107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl  186 (500)
T 3tcm_A          107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGIL  186 (500)
T ss_dssp             SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEE
T ss_pred             CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEE
Confidence            4567788777777663   467899999999999999999988876  568999999999999999999998 8999999


Q ss_pred             EeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      ++.|+|+++...++..|++++.+ +.+++ +|.+|++.|++.+++.    ..+++|++++|+||||.+++.+++++|+++
T Consensus       187 v~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~l  265 (500)
T 3tcm_A          187 VPIPQYPLYSASIALHGGALVPY-YLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF  265 (500)
T ss_dssp             EEESCCTHHHHHHHHTTCEEEEE-ECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             EeCCCcHhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHH
Confidence            99999999999999999999999 87765 5788999999999741    125899999999999999999999999999


Q ss_pred             HHHcCCEEEEcccccccccCCC-Cccc-----------cCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHH
Q 015768          193 CKAAGSWLVVDNTYEYFMYDGR-KHCC-----------VEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~~~~-~~~~-----------~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      |++||+++|+||+|..+.+++. +...           .....+++++|+||.+ |++|+|+||++..+..+++++.+..
T Consensus       266 a~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~  345 (500)
T 3tcm_A          266 CKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYK  345 (500)
T ss_dssp             HHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHH
T ss_pred             HHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHH
Confidence            9999999999999999888542 2211           1223578899999999 8899999999872111678888877


Q ss_pred             hhccCCcCccHHHHHHHHHHhcCC----------cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768          260 VQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  329 (400)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  329 (400)
                      ... ...+++.+.+.++..+++..          .++..+++++++++++.+.+.|++++++.+..+++++|+|+++...
T Consensus       346 ~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp  424 (500)
T 3tcm_A          346 IAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLP  424 (500)
T ss_dssp             HHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCC
T ss_pred             HHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCc
Confidence            653 45678899999998888731          1445677788899999999999998777888889899999655321


Q ss_pred             ----------CCC-HHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          330 ----------HLD-DFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       330 ----------~~~-~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                                ... ...++..+++++||.+.||..|+.   .+++|++++ .+++++++++++|+++++++.+
T Consensus       425 ~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~~~~~~  496 (500)
T 3tcm_A          425 QKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFHEAFMS  496 (500)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHH
Confidence                      011 233455677789999999999873   458999999 6999999999999999998765

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=2e-44  Score=343.85  Aligned_cols=366  Identities=16%  Similarity=0.128  Sum_probs=287.4

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCC---CCCcHHHHHHHHHhhc--CC-CCCCCCCCCCcHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVKELVW--DP-SISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~v~~a~~~~~~--~~-~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      .++++.......+.++.++.+. .+.|+|+.|.++   +++++.+++++.+.+.  .+ ....|++..|.+++|++++++
T Consensus        10 ~~~~l~~~~~~~~~~~~~l~~~-~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~   88 (422)
T 3d6k_A           10 DAARLAQVREEVTAKYAELKAK-NLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEA   88 (422)
T ss_dssp             --------CHHHHHHHHHHHHT-TCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHH
T ss_pred             CHHHHHhhHHHHHHHHHHHhcc-CCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHH
Confidence            4555555556666666666554 458999999998   7777788887766531  22 256798888999999999999


Q ss_pred             HHhhcCCCCCcEEEeCChHHHH--HHHHHHhcCC------------CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC
Q 015768           81 LNQENKLYKSSVMVTAGANQAF--VNIVLTLCDA------------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK  146 (400)
Q Consensus        81 l~~~~~~~~~~i~~~~g~t~a~--~~~~~~l~~~------------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~  146 (400)
                      +    ++++++|++|+|+++++  ..++.++..+            +|+|+++.|+|+++...++..|++++.+ |.+++
T Consensus        89 ~----~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~  163 (422)
T 3d6k_A           89 L----GLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINV-PMTDE  163 (422)
T ss_dssp             H----TCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETT
T ss_pred             h----CCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEec-CCCCC
Confidence            8    78889999999999997  6777777665            3479999999999999999999999999 88766


Q ss_pred             CCCCCHHHHHHhhccCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEcccccc--cccCCCCccc----
Q 015768          147 TLHPDADWLEKTLETKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCK-AAGSWLVVDNTYEY--FMYDGRKHCC----  218 (400)
Q Consensus       147 ~~~~~~e~l~~~l~~~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~-~~~~~li~D~a~~~--~~~~~~~~~~----  218 (400)
                      |  +|++.+++.+++.. +++|+ +++|+||||.+++.+++++|+++|+ +||+++|+||+|..  +..++.+...    
T Consensus       164 g--~d~~~l~~~l~~~~-~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~  240 (422)
T 3d6k_A          164 G--PDMGVVRELVKDPQ-VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEF  240 (422)
T ss_dssp             E--ECHHHHHHHHTSTT-EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHH
T ss_pred             C--CCHHHHHHHHhcCC-CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhH
Confidence            4  79999999987522 58888 5789999999999999999999999 99999999999985  4333322211    


Q ss_pred             ----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-C--cHHHHHHH
Q 015768          219 ----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERV  291 (400)
Q Consensus       219 ----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~  291 (400)
                          ...+++++++|+||. +++|+|+||++.+   +++++.+.......+++++.+.+.++..+|+. +  .+++++.+
T Consensus       241 ~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~  316 (422)
T 3d6k_A          241 AQAAGNPNRFWFMSSTSKI-THAGSGVSFFASS---KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHA  316 (422)
T ss_dssp             HHHTTCTTCEEEEEESTTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred             hhccCCCCcEEEEcChhhh-cCcccceEEEEeC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHH
Confidence                135789999999999 5699999999998   88999888877666778899999999999986 2  25667777


Q ss_pred             HHHHHHHHHHHHHhcc----CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-CCccC-----CCCeEE
Q 015768          292 KDLVRNREIIREALSP----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLR  361 (400)
Q Consensus       292 ~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iR  361 (400)
                      +.++++++.+.+.|++    ++.+.+..|.+++|+|++++..  +.+.+...+ .++||.+.| |..|.     .++++|
T Consensus       317 ~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gV~v~~~g~~f~~~~~~~~~~iR  393 (422)
T 3d6k_A          317 ASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG--TASRVVELA-KEAGIALTGAGSSFPLHNDPNNENIR  393 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT--CHHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC--CHHHHHHHH-HHCCeEEEcCccccCCCCCCCCCeEE
Confidence            7788888877777754    4444556777799999999753  456666644 689999999 45453     368999


Q ss_pred             EEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          362 ISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       362 i~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      |+++..+++++++++++|+++++++..
T Consensus       394 is~~~~~~e~i~~~~~~l~~~l~~~~~  420 (422)
T 3d6k_A          394 LAPSLPPVAELEVAMDGFATCVLMAAL  420 (422)
T ss_dssp             ECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999865899999999999999987644

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=2.5e-43  Score=337.02  Aligned_cols=363  Identities=21%  Similarity=0.315  Sum_probs=290.0

Q ss_pred             chHHHHHHHHHhc-----C--CCeEEcCCCCCCCCCcHHHHHHHHHhhcC----------CCCCCCCCCCCcHHHHHHHH
Q 015768           16 MPIMVQIQELVRG-----A--KNAVSLAQGVVYWQPPKMAMEKVKELVWD----------PSISKYGADEGLPELRDALV   78 (400)
Q Consensus        16 ~~~~~~~~~~~~~-----~--~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~~~~~~a   78 (400)
                      .+++.++..+...     +  .++|+|+.+.+++++ +.+.+++.+....          .....|++..|..+++++++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la   93 (428)
T 1iay_A           15 SPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIA   93 (428)
T ss_dssp             CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHH
T ss_pred             ccccchhhhhccCCCCcccCCCceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHH
Confidence            4556666555432     1  468999988887764 5778887754310          01356877778999999999


Q ss_pred             HHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEeccCCC-CCCCCCH
Q 015768           79 KKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSS-KTLHPDA  152 (400)
Q Consensus        79 ~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~  152 (400)
                      +++.+.+|    +++++|++++|+++++..++.+++++||+|+++.|+|+++...+. ..|++++.+ |.++ +++.+|+
T Consensus        94 ~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~  172 (428)
T 1iay_A           94 KFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPI-HCESSNNFKITS  172 (428)
T ss_dssp             HHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEE-CCCTTTTTCCCH
T ss_pred             HHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEe-ecCCccCCcCCH
Confidence            99988877    568999999999999999999999999999999999999887554 679999999 8765 4667899


Q ss_pred             HHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--C---
Q 015768          153 DWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--E---  220 (400)
Q Consensus       153 e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~---  220 (400)
                      +.+++.++.    ...+++|++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+++....   ..  .   
T Consensus       173 ~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~  252 (428)
T 1iay_A          173 KAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEM  252 (428)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGG
T ss_pred             HHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcccccc
Confidence            999998863    22358999999999999999999999999999999999999999999776543221   11  1   


Q ss_pred             ----CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHH
Q 015768          221 ----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKD  293 (400)
Q Consensus       221 ----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~  293 (400)
                          .++++++.|+||.+|++|+|+||++.++  +++++.+.....  .++.+.+.+.++..+++...   ++.++..+.
T Consensus       253 ~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  328 (428)
T 1iay_A          253 TYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN--DDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMR  328 (428)
T ss_dssp             TTSCTTSEEEEEESTTTSSCGGGCEEEEEESC--HHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCcEEEEecchhhcCCCCceEEEEEeCC--HHHHHHHHHHHh--cccCCHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence                4677999999999998999999999854  678888776543  46788999999999998632   356778888


Q ss_pred             HHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEecc
Q 015768          294 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGG  366 (400)
Q Consensus       294 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~  366 (400)
                      +.++++++.+.|++++ +.+..+.+++|+|++++...     .+..+++.+|++++||.+.+|..|+.  ++++||+++.
T Consensus       329 ~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~  407 (428)
T 1iay_A          329 LGKRHKHFTNGLEVVG-IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFAN  407 (428)
T ss_dssp             HHHHHHHHHHHHHHTT-CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSS
T ss_pred             HHHHHHHHHHHHHhcC-CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEec
Confidence            8999999999999885 46666767999999987421     12456788887556999999988764  5799999985


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 015768          367 LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+++++++++++|++++++
T Consensus       408 ~~~e~i~~~~~~l~~~l~~  426 (428)
T 1iay_A          408 MDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             SCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            6899999999999998864

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=5e-43  Score=339.82  Aligned_cols=338  Identities=17%  Similarity=0.320  Sum_probs=273.3

Q ss_pred             cHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcC-C--CCCcEEEeCChHHHHHHHHHHhcCCCC----
Q 015768           45 PKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENK-L--YKSSVMVTAGANQAFVNIVLTLCDAGD----  114 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~-~--~~~~i~~~~g~t~a~~~~~~~l~~~gd----  114 (400)
                      |..+++++.+++.+.   ....|++..|..++|+++++++.+.+| +  ++++|++|+|+++++..++.++.++||    
T Consensus       103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d  182 (498)
T 3ihj_A          103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRT  182 (498)
T ss_dssp             CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSE
T ss_pred             CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCC
Confidence            566667777766642   356799999999999999999998874 4  689999999999999999999998875    


Q ss_pred             EEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCC---CCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       115 ~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      +|+++.|+|+.+...++..|++++.+ +.+++ +|.+|+++|++.+++..   .+++|++++|+||||.+++.+++++|+
T Consensus       183 ~Vlv~~p~y~~~~~~~~~~g~~~v~~-~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~  261 (498)
T 3ihj_A          183 GVMIPIPQYPLYSAVISELDAIQVNY-YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVI  261 (498)
T ss_dssp             EEEEEESCCTHHHHHHHHTTCEEEEE-ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             EEEEeCCCchhHHHHHHHcCCEEEEe-eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHH
Confidence            99999999999999999999999999 87755 57899999999997521   259999999999999999999999999


Q ss_pred             HHHHHcCCEEEEcccccccccCCC-Ccccc------------CCCcEEEEecccccc-CCCcceeEEEE---ccCCcHHH
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGR-KHCCV------------EGDHVVNLFSFSKAY-GMMGWRVGYIA---YPSEVEGF  253 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~-~~~~~------------~~~~~i~~~s~sK~~-g~~g~~~G~i~---~~~~~~~~  253 (400)
                      ++|++||+++|+||+|..+.+++. +....            ....+++++|+||.+ |++|+|+||++   .+   +++
T Consensus       262 ~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~---~~l  338 (498)
T 3ihj_A          262 HFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLH---PEI  338 (498)
T ss_dssp             HHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC---HHH
T ss_pred             HHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCC---HHH
Confidence            999999999999999999988643 22211            123478899999999 78999999998   34   788


Q ss_pred             HHHHHHhhccCCcCccHHHHHHHHHHhcC---C----cH---HHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768          254 ATQLLKVQDNIPICASIISQHLALYSLQT---G----PE---WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  323 (400)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~----~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  323 (400)
                      ++.+..... ...+++.+.+.++..+++.   +    .+   +..++++.++++++.+.+.|++++++.+..+++++|+|
T Consensus       339 ~~~l~~~~~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~  417 (498)
T 3ihj_A          339 KGQLVKLLS-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAF  417 (498)
T ss_dssp             HHHHHHHHH-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEEC
T ss_pred             HHHHHHHHh-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEE
Confidence            888877654 4566788999988888863   1    12   23566788899999999999998777888899899999


Q ss_pred             eeCCCC----------CCCHHHH-HHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          324 ARLPEK----------HLDDFEV-VRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       324 ~~~~~~----------~~~~~~~-~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++..          ..+.+++ +.++++++||.+.||..|+.   ++++|++++ .+++++++++++|+++++++.+
T Consensus       418 ~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~~~  495 (498)
T 3ihj_A          418 PRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINFLE  495 (498)
T ss_dssp             CEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHHHH
Confidence            876421          1234454 66677789999999999873   469999997 5999999999999999998865

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=2.2e-43  Score=336.39  Aligned_cols=364  Identities=17%  Similarity=0.152  Sum_probs=290.6

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhc--CCCeEEcCCC---CCCCCC--cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQELVRG--AKNAVSLAQG---VVYWQP--PKMAMEKVKELVWDPSISKYGADEGLPELRDAL   77 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~---~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~   77 (400)
                      |++++|+.+...+....+.+.+..  .+++|+|+.|   +++..+  ++.+.+++.+.+.+.....|++..|..++++++
T Consensus        22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i  101 (420)
T 4f4e_A           22 MSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASV  101 (420)
T ss_dssp             CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHH
T ss_pred             cCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHH
Confidence            567888888777777777776643  4689999999   566543  489999999988875567898889999999999


Q ss_pred             HHHHHhhcCC--CCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCC
Q 015768           78 VKKLNQENKL--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHP  150 (400)
Q Consensus        78 a~~l~~~~~~--~~~--~i~~~~g~t~a~~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~  150 (400)
                      ++++....+.  +++  +|++|+|+++|+..++  .++.++||+|+++.|+|.++...++..|++++.+ |. +++++.+
T Consensus       102 a~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~  180 (420)
T 4f4e_A          102 QKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAY-PYYDAKTNGV  180 (420)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEE-ECEETTTTEE
T ss_pred             HHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEe-eeeccccCcc
Confidence            9999766542  467  8999999999999995  4567899999999999999999999999999999 87 4456678


Q ss_pred             CHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-cc-----ccCCCc
Q 015768          151 DADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HC-----CVEGDH  223 (400)
Q Consensus       151 ~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~-----~~~~~~  223 (400)
                      |++.+++.++.. +..+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.. ..     ....++
T Consensus       181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~  260 (420)
T 4f4e_A          181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLN  260 (420)
T ss_dssp             CHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCC
Confidence            999999999732 22488888999999999999999999999999999999999999999886421 11     123578


Q ss_pred             EEEEeccccccCCCcceeEEEEccCCcHHHHHH----HHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKD  293 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~  293 (400)
                      +++++|+||.+|++|+|+||++.....+++++.    +.........+++.+.+.++..++...      .+++++++++
T Consensus       261 ~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~  340 (420)
T 4f4e_A          261 VFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDR  340 (420)
T ss_dssp             EEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            899999999999899999998642111555443    333333345567888888888888763      3557888899


Q ss_pred             HHHHHHHHHHHhccC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHH
Q 015768          294 LVRNREIIREALSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVED  370 (400)
Q Consensus       294 ~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~  370 (400)
                      ++++++.+.+.|+++   +++.+..+.+++|+|+.++     .+.+ ..+++++||.+.|+.        |++++..+++
T Consensus       341 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~-~~~l~~~gI~v~~~~--------Ris~~~~~~~  406 (420)
T 4f4e_A          341 IRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT-----SAQV-DRLREEFGIYAVSTG--------RICVAALNTR  406 (420)
T ss_dssp             HHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC-----HHHH-HHHHHHHCEECCTTS--------EEEGGGCCTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC-----HHHH-HHHHHhCCEEecCCC--------eEEEecCCHH
Confidence            999999999999987   3456777788999998774     3444 445568999999853        9999876788


Q ss_pred             HHHHHHHHHHHHH
Q 015768          371 DCKAAADRLRRGL  383 (400)
Q Consensus       371 ~~~~~~~~l~~~l  383 (400)
                      ++++++++|++++
T Consensus       407 ~i~~~~~~l~~~l  419 (420)
T 4f4e_A          407 NLDVVANAIAAVL  419 (420)
T ss_dssp             THHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8999999999876

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=1.7e-43  Score=335.13  Aligned_cols=341  Identities=22%  Similarity=0.320  Sum_probs=267.4

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF  102 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~  102 (400)
                      .++++|+|+.+.+++++++.+++++.+.+.+.    ....|++..+..++++++++++.  +| +++++|++|+|+++++
T Consensus        31 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~~~~~~v~~~~G~~~al  108 (400)
T 3asa_A           31 PQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGFVDAKEIFISDGAKVDL  108 (400)
T ss_dssp             TTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTSSCGGGEEEESCHHHHH
T ss_pred             CCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCCCCHHHEEEccChHHHH
Confidence            36789999999998888999999998877531    24568777889999999999964  46 6789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcE-EEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~  180 (400)
                      ..++. +.++||+|+++.|+|+++...++..|.+ ++.+ |.+++ ++..+++.    + +  .+++|++++|+||||.+
T Consensus       109 ~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~l~~----~-~--~~~~v~l~~p~nptG~~  179 (400)
T 3asa_A          109 FRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIAL-PCLQENAFFPEFPE----D-T--HIDILCLCSPNNPTGTV  179 (400)
T ss_dssp             HHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEE-ECCGGGTTCCCCCT----T-C--CCSEEEEESSCTTTCCC
T ss_pred             HHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEec-ccchhcCcccChhh----c-c--CccEEEEeCCCCCCCCc
Confidence            98765 4578999999999999999999999998 8888 77653 34444322    1 2  35999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccC--CCcEEEEeccccccCCCcceeEEEEccCCcHHH--
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--  253 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~--  253 (400)
                      +|.+++++|+++|+++|+++|+||+|+.+.+++..   .....  .+++++++|+||.+|++|+|+||++.++   ++  
T Consensus       180 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~---~~~~  256 (400)
T 3asa_A          180 LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ---ELTY  256 (400)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCT---TCBC
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeCh---hhcc
Confidence            99999999999999999999999999988765431   11112  3468999999999998999999999984   44  


Q ss_pred             -----HHHHHHhhccCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee-C
Q 015768          254 -----ATQLLKVQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR-L  326 (400)
Q Consensus       254 -----~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~  326 (400)
                           ++.+.......++ +++.+.+.++..+|+..  +.++.++.++++++++.+.|++++ +.+..+.+++++|++ +
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~  333 (400)
T 3asa_A          257 ADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL--PQLEAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPT  333 (400)
T ss_dssp             TTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHTT-CEEEECSSSSEEEEECC
T ss_pred             chhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCceEEEEecc
Confidence                 4444322222233 57899999998888764  567778888999999999998875 467666678999999 7


Q ss_pred             CCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          327 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +.. .+..+++.++++++||.+.||..|.  .++++||++. .+++++++++++|++++++..
T Consensus       334 ~~~-~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~l~~l~~~~~~~~  394 (400)
T 3asa_A          334 QAN-ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAACERLQMAPALQS  394 (400)
T ss_dssp             CTT-CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHHHHHHHC------
T ss_pred             CCC-CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHHHHHHHHHHHhhh
Confidence            643 2455788888767799999998885  3679999965 489999999999999987653

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=1.1e-42  Score=324.26  Aligned_cols=321  Identities=22%  Similarity=0.289  Sum_probs=267.5

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      +++|+|+.+.+++++|+.+      ++.  ....|++. +..++++++++++    ++++++|++++|++++++.++.++
T Consensus        29 ~~~i~l~~~~~~~~~~~~v------a~~--~~~~Y~~~-~~~~lr~~la~~~----~~~~~~v~~~~G~~~ai~~~~~~~   95 (356)
T 1fg7_A           29 NGDVWLNANEYPTAVEFQL------TQQ--TLNRYPEC-QPKAVIENYAQYA----GVKPEQVLVSRGADEGIELLIRAF   95 (356)
T ss_dssp             TCSEECSSCCCSSCCCCCC------CCC--CTTSCCCS-SCHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHHHHH
T ss_pred             CceEEeeCCCCCCCCCHhH------hhh--hhccCCCc-cHHHHHHHHHHHh----CCChHHEEEcCCHHHHHHHHHHHH
Confidence            4689999999999877776      222  25678554 5889999999998    778899999999999999999999


Q ss_pred             cCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 ~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      .++| |+|+++.|+|+++...++..|++++.+ |.++ ++.+|++.+++.++ +  +++|++++|+||||.++|.+++++
T Consensus        96 ~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~-~--~~~v~l~~p~nptG~~~~~~~l~~  170 (356)
T 1fg7_A           96 CEPGKDAILYCPPTYGMYSVSAETIGVECRTV-PTLD-NWQLDLQGISDKLD-G--VKVVYVCSPNNPTGQLINPQDFRT  170 (356)
T ss_dssp             CCTTTCEEEECSSSCTHHHHHHHHHTCEEEEC-CCCT-TSCCCHHHHHTSCT-T--EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             hCCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-eCCC-CCCCCHHHHHHHhc-C--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            9999 999999999999999999999999999 8764 45789999999886 4  499999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      |+++|+ +|+++|+||+|..+........ ....+++++++|+||.+|++|+|+||++.+   +++++.+.....  +++
T Consensus       171 l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~~  244 (356)
T 1fg7_A          171 LLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN---EEVINLLMKVIA--PYP  244 (356)
T ss_dssp             HHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC---HHHHHHHHHHSC--SSC
T ss_pred             HHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC---HHHHHHHHHhcC--CCC
Confidence            999999 9999999999998763211111 123567899999999999999999999997   788888887654  557


Q ss_pred             ccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768          268 ASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  346 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi  346 (400)
                      ++.+.+.++..+|+... +++++..++++++++++.+.|++++.+....+.+++|+|++++    +..++.++| .++||
T Consensus       245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L-~~~gI  319 (356)
T 1fg7_A          245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSL-WDQGI  319 (356)
T ss_dssp             SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHH-HHTTE
T ss_pred             CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC----CHHHHHHHH-HHCCE
Confidence            89999999999997521 2378888899999999999999887422333455889999987    467888888 58999


Q ss_pred             EEeC-CCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          347 VVIP-GGACGCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       347 ~v~~-g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .+.+ |..|+.++++||+++  +++++++++++|++
T Consensus       320 ~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~  353 (356)
T 1fg7_A          320 ILRDQNKQPSLSGCLRITVG--TREESQRVIDALRA  353 (356)
T ss_dssp             ECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHT
T ss_pred             EEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHh
Confidence            9999 888877789999998  47888888888765

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=7.2e-43  Score=332.77  Aligned_cols=342  Identities=16%  Similarity=0.164  Sum_probs=278.8

Q ss_pred             CCCeEEcCCCCC-----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           29 AKNAVSLAQGVV-----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        29 ~~~~i~~~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      +.++|+|+.|.+     ++++++.+.+++.+..... ...|++..|.+++++++++++.+.++.+ +++|++|+|+++++
T Consensus        37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al  115 (418)
T 3rq1_A           37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGI  115 (418)
T ss_dssp             GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHH
T ss_pred             CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHH
Confidence            678999999975     6778888888887654322 4568888899999999999997776532 23999999999999


Q ss_pred             HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCC-CCCC
Q 015768          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNP-GNPS  177 (400)
Q Consensus       103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p-~npt  177 (400)
                      ..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++++.+|++.+++.+++    ++ .+++++++| +|||
T Consensus       116 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~~~~~-~~~vi~~~p~~NPt  193 (418)
T 3rq1_A          116 HHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTY-SLFDEHNNFNHEAFQNRVNELAAKQT-NVVVIFNTPGNNPT  193 (418)
T ss_dssp             HHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CSBCTTSSBCHHHHHHHHHHHHHHCS-EEEEEEECSSCTTT
T ss_pred             HHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEE-eeeCCCCCcCHHHHHHHHHHhhccCC-CEEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999 88655567899999999874    43 237888899 9999


Q ss_pred             ccCCCHHHHHHHHHHHH------HcCCEEEEcccccccccCCCCc---ccc---CCCc--EEEEeccccccCCCcceeEE
Q 015768          178 GTYIPERLLKRISDLCK------AAGSWLVVDNTYEYFMYDGRKH---CCV---EGDH--VVNLFSFSKAYGMMGWRVGY  243 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~------~~~~~li~D~a~~~~~~~~~~~---~~~---~~~~--~i~~~s~sK~~g~~g~~~G~  243 (400)
                      |.+++.+++++|+++|+      +||+++|+||+|.++.+.+...   ...   ..++  +++++|+||.+|++|+|+||
T Consensus       194 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  273 (418)
T 3rq1_A          194 GYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGA  273 (418)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEE
T ss_pred             CCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceE
Confidence            99999999999999999      8999999999999887654311   111   1233  58899999999999999999


Q ss_pred             EEc---cCCcHHHHHHHHHhhccC----CcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHHHHHHHHHhccCCC
Q 015768          244 IAY---PSEVEGFATQLLKVQDNI----PICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       244 i~~---~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      ++.   +   +++++.+.......    ..+++.+++.++..+++...   .|   ..++++.++++++.+.+.|++++ 
T Consensus       274 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-  349 (418)
T 3rq1_A          274 MIGISDD---EEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG-  349 (418)
T ss_dssp             EEEEESS---HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             EEEEeCC---HHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            988   5   78888887654321    24578899999998887631   12   23556778888899999998885 


Q ss_pred             CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +.+..+.+++|+|+.++    +..++++.| .++||.+.||     ++++||+++..+++++++++++|+++++++.
T Consensus       350 ~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gi~v~~g-----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~  416 (418)
T 3rq1_A          350 LPMLPYRGGFFITIPTD----SANAICEEL-KKEHIYVIAL-----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLG  416 (418)
T ss_dssp             CCCCCCCSSSEEEEECT----THHHHHHHH-HHTTEECEEC-----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred             CCCCCCCceEEEEcCCC----CHHHHHHHH-HhCCEEEecC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence            47777888899998875    577888766 5899999996     4789999886699999999999999998764

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=1.1e-42  Score=333.16  Aligned_cols=351  Identities=21%  Similarity=0.310  Sum_probs=286.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-----------CCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEE
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-----------ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV   94 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~   94 (400)
                      ..+|+|+.+.+.+. ++.+.+++.+......           ...|++..|.+++++++++++.+.++    ++++++++
T Consensus        38 ~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~  116 (435)
T 3piu_A           38 NGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVL  116 (435)
T ss_dssp             TSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEE
T ss_pred             CCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEE
Confidence            44788888877765 6677777776544211           14588888999999999999986654    56899999


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEeccCCCC-CCCCCHHHHHHhhcc----CCCCeEE
Q 015768           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSSK-TLHPDADWLEKTLET----KPTPKLV  168 (400)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~----~~~~~~v  168 (400)
                      |+|+++|+..++.++.++||.|+++.|+|.++...++ ..|.+++.+ +.+++ ++.+|++.+++.+++    ...+++|
T Consensus       117 ~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v  195 (435)
T 3piu_A          117 TAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI-HCTSSNGFQITETALEEAYQEAEKRNLRVKGV  195 (435)
T ss_dssp             EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE-ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEe-eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence            9999999999999999999999999999999998887 789999999 87654 467899999999874    2235999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-----cC---------CCcEEEEecccccc
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-----VE---------GDHVVNLFSFSKAY  234 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-----~~---------~~~~i~~~s~sK~~  234 (400)
                      ++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.....     ..         .+++++++|+||.+
T Consensus       196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~  275 (435)
T 3piu_A          196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL  275 (435)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred             EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence            99999999999999999999999999999999999999988776543221     11         46779999999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |++|+|+||+++++  +++.+.+.....  .++.+++.+.++..+++...   ++..+.++++.++++.+.+.|++++ +
T Consensus       276 g~~G~r~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~  350 (435)
T 3piu_A          276 GLPGFRVGAIYSND--DMVVAAATKMSS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSG-I  350 (435)
T ss_dssp             CCGGGCEEEEEESC--HHHHHHHHHHGG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-C
T ss_pred             CCCceeEEEEEeCC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence            98999999999864  677777765543  45567888888888887532   2456777888899999999999885 4


Q ss_pred             cccCCCCceEEEeeCCCCCC-----CHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      .+..+.+++++|+.++....     +..++..+|++++||.+.||..|+  .++++||+++..+++++++++++|+++++
T Consensus       351 ~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~  430 (435)
T 3piu_A          351 SCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVG  430 (435)
T ss_dssp             EECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence            77778878999999975321     245788888766699999998875  47899999986689999999999999998


Q ss_pred             HHh
Q 015768          385 ELV  387 (400)
Q Consensus       385 ~~~  387 (400)
                      ++.
T Consensus       431 ~~~  433 (435)
T 3piu_A          431 EYY  433 (435)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            764

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=2.9e-42  Score=322.59  Aligned_cols=333  Identities=17%  Similarity=0.233  Sum_probs=274.7

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      +++++|+|+.+.+++++++++++++.+.+.+  ...|+ ..+..++++++++++    ++++++|++|+|+++++..++.
T Consensus        22 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~----~~~~~~v~~~~g~~~al~~~~~   94 (364)
T 1lc5_A           22 SPDQLLDFSANINPLGMPVSVKRALIDNLDC--IERYP-DADYFHLHQALARHH----QVPASWILAGNGETESIFTVAS   94 (364)
T ss_dssp             CGGGSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCC-CTTCHHHHHHHHHHH----TSCGGGEEEESSHHHHHHHHHH
T ss_pred             CccceEEeccccCCCCCCHHHHHHHHHHHHH--hhcCC-CCCHHHHHHHHHHHH----CcCHHHEEECCCHHHHHHHHHH
Confidence            4567999999998888899999999998765  45674 457899999999998    7778999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      ++  +||+|+++.|+|+++...++..|.+++.+ |.++ +++.+ ++.+.+.+.++  ++++++++|+||||.++|.+++
T Consensus        95 ~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~-l~~~~~~~~~~--~~~v~i~~p~nptG~~~~~~~l  168 (364)
T 1lc5_A           95 GL--KPRRAMIVTPGFAEYGRALAQSGCEIRRW-SLREADGWQL-TDAILEALTPD--LDCLFLCTPNNPTGLLPERPLL  168 (364)
T ss_dssp             HH--CCSEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCC-CTTHHHHCCTT--CCEEEEESSCTTTCCCCCHHHH
T ss_pred             Hc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEE-eCCcccccch-hHHHHHhccCC--CCEEEEeCCCCCCCCCCCHHHH
Confidence            99  67999999999999999999999999999 8775 45544 56565555544  4899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhcc
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~-~~~~~~~~~~~l~~~~~~  263 (400)
                      ++|+++|++||+++|+||+|+.+.+++.....  ...+++++++|+||++|++|+|+||++ .+   +++++.+..... 
T Consensus       169 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---~~~~~~l~~~~~-  244 (364)
T 1lc5_A          169 QAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD---DAAMARMRRQQM-  244 (364)
T ss_dssp             HHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC---HHHHHHHHHHSC-
T ss_pred             HHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECC---HHHHHHHHHhCC-
Confidence            99999999999999999999988765322221  235688999999999988999999999 77   788888877654 


Q ss_pred             CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768          264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                       +++++.+.+.++..+|+. .+++++..+.++++++++.+.|++++++.+.++. ++|+|++++.   +..++..+|. +
T Consensus       245 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-g~~~~~~~~~---~~~~l~~~l~-~  317 (364)
T 1lc5_A          245 -PWSVNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER---EDIDLQRRLL-T  317 (364)
T ss_dssp             -TTCSCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS-SSEEEEEESC---TTCCHHHHHH-T
T ss_pred             -CCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC-CeEEEEECCC---cHHHHHHHHH-H
Confidence             677899999999999987 5678888899999999999999988665666554 7788888874   2446777776 7


Q ss_pred             cCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       344 ~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +||.+.+|..|.  .++++||+++  +.++++++++.|+++++++
T Consensus       318 ~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~~~  360 (364)
T 1lc5_A          318 QRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVLTGI  360 (364)
T ss_dssp             TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC---
T ss_pred             CCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhhcc
Confidence            899999998875  3689999987  4788888888888877654

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=4.9e-42  Score=320.57  Aligned_cols=330  Identities=16%  Similarity=0.217  Sum_probs=276.7

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~  106 (400)
                      .+++++|+|+.+.+++++|+++++++.+.+.+  ...| +..+..++++++++++    +++++++++|+|++++++.++
T Consensus        23 ~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~t~al~~~~   95 (361)
T 3ftb_A           23 FKGRELLDYSSNINPLGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYL----KLKDIGIVLGNGASEIIELSI   95 (361)
T ss_dssp             -----CEETTCCCCTTCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHH----TCCSCEEEEESSHHHHHHHHH
T ss_pred             cCCCCEEEecCCCCCCCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHh----CCCcceEEEcCCHHHHHHHHH
Confidence            46788999999999998899999999988876  4556 4567899999999988    778899999999999999999


Q ss_pred             HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      .++    |+|+++.|+|+++...++..|++++.+ |.++++ .++++++++.+++ +  +++++++|+||||.+++.+++
T Consensus        96 ~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~~~~~l~~~l~~-~--~~v~i~~p~nptG~~~~~~~l  166 (361)
T 3ftb_A           96 SLF----EKILIIVPSYAEYEINAKKHGVSVVFS-YLDENM-CIDYEDIISKIDD-V--DSVIIGNPNNPNGGLINKEKF  166 (361)
T ss_dssp             TTC----SEEEEEESCCTHHHHHHHHTTCEEEEE-ECCTTS-CCCHHHHHHHTTT-C--SEEEEETTBTTTTBCCCHHHH
T ss_pred             HHc----CcEEEecCChHHHHHHHHHcCCeEEEe-ecCccc-CCCHHHHHHhccC-C--CEEEEeCCCCCCCCCCCHHHH
Confidence            998    899999999999999999999999999 887663 4578999999976 4  999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCC---ccccCCCcEEEEeccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhc
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQD  262 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~-~~~~~~~~~~~l~~~~~  262 (400)
                      ++|+++|++||+++|+||+|+.+.++...   ......+++++++|+||.+|++|+|+||++ .+   +++.+.+.....
T Consensus       167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~---~~~~~~~~~~~~  243 (361)
T 3ftb_A          167 IHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN---KEIAAKIKAKQN  243 (361)
T ss_dssp             HHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC---HHHHHHHHTTSC
T ss_pred             HHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC---HHHHHHHHhhCC
Confidence            99999999999999999999988875111   111235678999999999998999999998 66   888888887654


Q ss_pred             cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                        +++++.+.+.++..+|+. .+++++.++++.++++++.+.|++++.+. +.++. +.++|++++.  .+..++...|.
T Consensus       244 --~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~l~  317 (361)
T 3ftb_A          244 --PWNINCFAEMAAINCLKD-TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPH-ANFVLCRLEN--ISGEKLYDSLL  317 (361)
T ss_dssp             --TTCSCHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCS-SSEEEEEESS--SCHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCC-CeEEEEEcCC--CCHHHHHHHHH
Confidence              568899999999999986 67788999999999999999999987766 66565 7778888875  36888998886


Q ss_pred             HhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          342 HRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                       ++||.+.+|..|+.  ++++|++++  +.++++++++.|++..+
T Consensus       318 -~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          318 -KEDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             -TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred             -HCCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence             67999999998863  689999998  46777777776666554

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.7e-43  Score=334.35  Aligned_cols=350  Identities=15%  Similarity=0.127  Sum_probs=283.9

Q ss_pred             HHHhcCCCeEEcCCCCCCCCC---cHHHHHHH--HHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768           24 ELVRGAKNAVSLAQGVVYWQP---PKMAMEKV--KELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA   96 (400)
Q Consensus        24 ~~~~~~~~~i~~~~~~~~~~~---~~~v~~a~--~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~   96 (400)
                      ..++..+..++|+.|.++...   ++.+.+++  .+.+.+.  ....|++..|.+++|+++++++    ++++++|++|+
T Consensus        27 ~~~~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~----~~~~~~i~~t~  102 (427)
T 3ppl_A           27 DELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL----GVPVEQVLAGD  102 (427)
T ss_dssp             HHHHHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH----TSCGGGEEECS
T ss_pred             HHhhcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh----CCCcceEEEeC
Confidence            344556788999999877532   23466665  5555442  2567988889999999999998    78889999999


Q ss_pred             ChHHHH--HHHHHHhcC--C----------CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768           97 GANQAF--VNIVLTLCD--A----------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus        97 g~t~a~--~~~~~~l~~--~----------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      |+++++  +.++.++.+  |          ||+|++++|+|+++...++..|++++.+ |.+++|  +|++.+++.++..
T Consensus       103 G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l~~~l~~~  179 (427)
T 3ppl_A          103 ASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISV-PMNEDG--PDMDAVEELVKNP  179 (427)
T ss_dssp             SCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEE-EEETTE--ECHHHHHHHTTST
T ss_pred             CcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEe-CCCCCC--CCHHHHHHHHhcC
Confidence            999999  588888876  6          8999999999999999999999999999 888765  7999999999522


Q ss_pred             CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEcccccccccCCCCcc---c-------cCCCcEEEEecc
Q 015768          163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTYEYFMYDGRKHC---C-------VEGDHVVNLFSF  230 (400)
Q Consensus       163 ~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~li~D~a~~~~~~~~~~~~---~-------~~~~~~i~~~s~  230 (400)
                       .+++|+++ +|+||||.+++.+++++|+++| ++||+++|+||+|+.+.+++....   .       ...+++++++|+
T Consensus       180 -~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  258 (427)
T 3ppl_A          180 -QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTST  258 (427)
T ss_dssp             -TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEES
T ss_pred             -CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEech
Confidence             24888866 7899999999999999999999 999999999999998776543211   1       145789999999


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-C--cHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      ||. +++|+|+||++.+   +++++.+.......+++++.+.+.++..+++. +  .++..+.++.++++++.+.+.|.+
T Consensus       259 SK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  334 (427)
T 3ppl_A          259 SKI-TLAGAGVSFFLTS---AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDS  334 (427)
T ss_dssp             TTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhc-cCcCccEEEEEcC---HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999 5699999999999   88888888877767788899999999999986 2  245667777777777777766654


Q ss_pred             ----CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-CCccC-----CCCeEEEEeccCCHHHHHHHHH
Q 015768          308 ----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLRISFGGLVEDDCKAAAD  377 (400)
Q Consensus       308 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iRi~~~~~~~~~~~~~~~  377 (400)
                          ++.+.+..|.+++|+|++++..  +..++...+ .++||.+.| |..|.     .++++||+++..++++++++++
T Consensus       335 ~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~  411 (427)
T 3ppl_A          335 RLAEYGVAQWTVPAGGYFISLDVVPG--TASRVAELA-KEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMD  411 (427)
T ss_dssp             HHGGGTCCEECCCSBSSCEEEECSTT--CHHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHH
T ss_pred             hcCCCCceEEeCCCccEEEEEECCcc--hHHHHHHHH-HHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHH
Confidence                4455677788899999999864  577777766 589999999 44443     4689999998778999999999


Q ss_pred             HHHHHHHHHhc
Q 015768          378 RLRRGLEELVK  388 (400)
Q Consensus       378 ~l~~~l~~~~~  388 (400)
                      +|.+++++...
T Consensus       412 ~l~~~l~~~~~  422 (427)
T 3ppl_A          412 GVATCVLLAAA  422 (427)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999987653

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=1.4e-42  Score=330.55  Aligned_cols=359  Identities=19%  Similarity=0.240  Sum_probs=274.4

Q ss_pred             HHHHHHHh--cCCCeEEcCCCCCCCCCc--HHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHHhhcC--CCC
Q 015768           20 VQIQELVR--GAKNAVSLAQGVVYWQPP--KMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENK--LYK   89 (400)
Q Consensus        20 ~~~~~~~~--~~~~~i~~~~~~~~~~~~--~~v~~a~~~~~~~~~----~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~   89 (400)
                      ..+.+.++  .++++++|+.|.+...++  +.+.+++.+.+.++.    ...|++..|.+++|+++++++.+.+|  +++
T Consensus        19 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~   98 (417)
T 3g7q_A           19 RLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP   98 (417)
T ss_dssp             HHHHHHHC-----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG
T ss_pred             HHHHHHHhhccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc
Confidence            33444433  337899999998877432  456666766665431    24688888999999999999988875  468


Q ss_pred             CcEEEeCChHHHHHHHHHHhcCCCC-----EEEEe-CCCccchhHHHHhc------CcEEEEeccCCCCCCCCCHHHHHH
Q 015768           90 SSVMVTAGANQAFVNIVLTLCDAGD-----SVVMF-APYYFNSYMSFQMT------GVTHILVGPCSSKTLHPDADWLEK  157 (400)
Q Consensus        90 ~~i~~~~g~t~a~~~~~~~l~~~gd-----~vlv~-~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~e~l~~  157 (400)
                      ++|++|+|+|+|++.++.++.++||     +|+++ .|+|+++...+...      +..+..+ +.+..++.+|++.++ 
T Consensus        99 ~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~-  176 (417)
T 3g7q_A           99 QNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELL-PEGQFKYHVDFEHLH-  176 (417)
T ss_dssp             GGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEE-GGGEEEEECCGGGCC-
T ss_pred             ccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCccccc-CCcccccccCHHHhc-
Confidence            9999999999999999999999987     89997 99999887765322      3344444 433234567888887 


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCCCcEEEEeccccccC
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g  235 (400)
                       +.++  +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+..+..  .......+++++++|+|| ++
T Consensus       177 -~~~~--~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~  252 (417)
T 3g7q_A          177 -IGEE--TGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LG  252 (417)
T ss_dssp             -CCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GT
T ss_pred             -cccC--ceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-cc
Confidence             5444  49999999999999999999999999999999999999999986432111  111223578999999999 57


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHH-HHHHHHHHHHHHHHHhcc-CCC-
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSP-LGE-  310 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~L~~-~~~-  310 (400)
                      ++|+|+||++.+   +++++.+.......+++++++.+.++..+++...  ++..+ +.+.++++++.+.+.|++ ++. 
T Consensus       253 ~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  329 (417)
T 3g7q_A          253 LPGSRCGIIIAN---DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEE  329 (417)
T ss_dssp             CTTSCCEEEECC---HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred             CCCcceEEEEeC---HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            799999999998   8899999887777778889999999999998643  22233 556677777777777766 442 


Q ss_pred             -CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---------CCeEEEEeccCCHHHHHHHHHHHH
Q 015768          311 -GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       311 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                       +.+..+.+++++|+.++....+..++...| .++||.+.||..|..         ++++||+++. +++++++++++|+
T Consensus       330 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~  407 (417)
T 3g7q_A          330 RCLIHKPEGAIFLWLWFKDLPITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILA  407 (417)
T ss_dssp             TCEEECCCBSSEEEEECTTCSSCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHH
T ss_pred             CceeeCCCcceEEEEEcCCCCCCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHH
Confidence             466677889999999986434788888887 489999999998853         4699999997 9999999999999


Q ss_pred             HHHHHHhcc
Q 015768          381 RGLEELVKD  389 (400)
Q Consensus       381 ~~l~~~~~~  389 (400)
                      ++++++.++
T Consensus       408 ~~l~~~~~~  416 (417)
T 3g7q_A          408 EEIERAWRE  416 (417)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999987653

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=4.5e-41  Score=314.04  Aligned_cols=329  Identities=19%  Similarity=0.249  Sum_probs=270.4

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      +++++|+|+.+.+++++++++++++.+.+.+..  ...|+ ..+..++++++++++    |+++++|++|+|++++++.+
T Consensus        24 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~~~----g~~~~~i~~t~g~~~al~~~   98 (360)
T 3hdo_A           24 DIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGELY----GFDPSWIIMANGSDEVLNNL   98 (360)
T ss_dssp             CCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHH
T ss_pred             cccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHH
Confidence            467899999999999999999999999987641  34564 346789999999988    67889999999999999999


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      +.++.++||+|+++.|+|+++...++..|++++.+ |.+++ +.+  +.+++.+  +  ++++++++|+||||.++|   
T Consensus        99 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~-~~~--~~l~~~~--~--~~~v~i~~p~nptG~~~~---  167 (360)
T 3hdo_A           99 IRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTF-GLTGD-FRI--AGFPERY--E--GKVFFLTTPNAPLGPSFP---  167 (360)
T ss_dssp             HHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEE-CBCTT-SSB--TTCCSSB--C--SSEEEEESSCTTTCCCCC---
T ss_pred             HHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEe-eCCCC-CCH--HHHHhhc--C--CCEEEEeCCCCCCCCCcC---
Confidence            99999999999999999999999999999999999 87654 333  3333222  2  479999999999999999   


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      ++++.++|+++|+++|+||+|+.+...+........+++++++|+||.+|++|+|+||++.+   +++++.+.....  +
T Consensus       168 ~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~  242 (360)
T 3hdo_A          168 LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR---PEVIAALDKIRD--H  242 (360)
T ss_dssp             HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECC---HHHHHHHHHHSC--S
T ss_pred             HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeC---HHHHHHHHHhCC--C
Confidence            56677778899999999999998743221111123578899999999999899999999997   889998887664  5


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  345 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  345 (400)
                      ++++.+.+.++..+|+. .+++.+.+++++++++++.+.|++++ +.+.++. +.++|+.++.  .+..++...|. ++|
T Consensus       243 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~-~~~~~~~~~~--~~~~~l~~~l~-~~g  316 (360)
T 3hdo_A          243 YNLDRLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRSIG-YDVIPSQ-GNYLFATPPD--RDGKRVYDGLY-ARK  316 (360)
T ss_dssp             CCSCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCS-SSEEEEECTT--CCHHHHHHHHH-HTT
T ss_pred             CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEcCCC-ccEEEEECCC--CCHHHHHHHHH-HCC
Confidence            77899999999999996 67788999999999999999999884 4665554 7788888874  36788888775 789


Q ss_pred             eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      |.+.++..+..++++||+++  ++++++++++.|++..+.
T Consensus       317 i~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~~~  354 (360)
T 3hdo_A          317 VLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIGEG  354 (360)
T ss_dssp             EECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHHC-
T ss_pred             EEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHhcc
Confidence            99999887666799999998  588888888887766543

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=1.2e-42  Score=331.64  Aligned_cols=358  Identities=18%  Similarity=0.213  Sum_probs=286.9

Q ss_pred             hHHHHHHHHHhcCCCeEEcCCCCCC---CCCcHHHHHHHH--HhhcCC-CCCCC-CCCCCcHHHHHHHHHHHHhhcCCCC
Q 015768           17 PIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVK--ELVWDP-SISKY-GADEGLPELRDALVKKLNQENKLYK   89 (400)
Q Consensus        17 ~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~g~~~~~~~~a~~l~~~~~~~~   89 (400)
                      ..+.++.++ +...+.++|+.|.++   ++.|+++++++.  +.+..+ ....| ++..|.+++|+++++++    ++++
T Consensus        13 ~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~----~~~~   87 (423)
T 3ez1_A           13 LARQAYEAF-KARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL----DVKA   87 (423)
T ss_dssp             HHHHHHHHH-HHHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT----TSCG
T ss_pred             HHHHHHHHh-hcCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh----CCCh
Confidence            334444444 444678999999988   677888888885  555532 14678 78889999999999998    7888


Q ss_pred             CcEEEeCChHHHHH--HHHHHhcC--C---------CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHH
Q 015768           90 SSVMVTAGANQAFV--NIVLTLCD--A---------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE  156 (400)
Q Consensus        90 ~~i~~~~g~t~a~~--~~~~~l~~--~---------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~  156 (400)
                      ++|++|+|+++++.  .++.++.+  +         ||+|+++.|+|+++...++..|++++.+ |.+++|  +|++.++
T Consensus        88 ~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l~  164 (423)
T 3ez1_A           88 ENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV-DMQSDG--PDVDAVE  164 (423)
T ss_dssp             GGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETTE--ECHHHHH
T ss_pred             hhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEec-cCCCCC--CCHHHHH
Confidence            99999999999998  88888877  7         5999999999999999999999999999 887664  7999999


Q ss_pred             HhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEcccccccccCC-C--Ccc---c-----cCCCc
Q 015768          157 KTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTYEYFMYDG-R--KHC---C-----VEGDH  223 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~li~D~a~~~~~~~~-~--~~~---~-----~~~~~  223 (400)
                      +.++....+++|++. +|+||||.+++.+++++|+++| ++||+++|+||+|..+.+.+ .  ...   .     ...++
T Consensus       165 ~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (423)
T 3ez1_A          165 RLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDR  244 (423)
T ss_dssp             HHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTS
T ss_pred             HHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCe
Confidence            999522335888765 7899999999999999999999 99999999999999655433 1  111   1     24578


Q ss_pred             EEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC--C--cHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--G--PEWVTERVKDLVRNRE  299 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~--~--~~~~~~~~~~~~~~~~  299 (400)
                      +++++|+||.+ ++|+|+||++.+   +++++.+.......+++++.+.+.++..+++.  +  .++..+..+.+.++++
T Consensus       245 ~i~~~S~sK~~-~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~  320 (423)
T 3ez1_A          245 AFVFASTSKIT-FAGAGLGFVASS---EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFR  320 (423)
T ss_dssp             EEEEEESTTTS-CSSSSCEEEEEC---HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCchhhc-cCCcceEEEEeC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence            99999999984 699999999999   78999998887777888999999999998886  3  2455666666666666


Q ss_pred             HHHHHhc----cCC-CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-CCccC-----CCCeEEEEeccCC
Q 015768          300 IIREALS----PLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLRISFGGLV  368 (400)
Q Consensus       300 ~l~~~L~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iRi~~~~~~  368 (400)
                      .+.+.|.    +++ .+.+..|.+++|+|++++..  +.+.+...+ .++||.+.| |..|.     .++++||+++..+
T Consensus       321 ~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~  397 (423)
T 3ez1_A          321 AVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP--VADRVVKLA-EAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPP  397 (423)
T ss_dssp             HHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS--CHHHHHHHH-HHTTEECCCTTTTSSTTCCSSSCEEEECCSSSC
T ss_pred             HHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC--cHHHHHHHH-HHCCcEEecCcccccCCCCCCCCeEEEEcCCCC
Confidence            6655554    455 34666788899999999864  466676655 589999999 66664     3689999998668


Q ss_pred             HHHHHHHHHHHHHHHHHHhcc
Q 015768          369 EDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       369 ~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      ++++++++++|++++++...+
T Consensus       398 ~~~i~~~~~~l~~~l~~~~~~  418 (423)
T 3ez1_A          398 VEEVRTAMQVVAACIRLATEE  418 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999887543

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=5.3e-42  Score=326.18  Aligned_cols=361  Identities=17%  Similarity=0.149  Sum_probs=284.9

Q ss_pred             HHHhhhcCchHHHHHHHHHhc--CCCeEEcCCCCC-CC----CCcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHH
Q 015768            8 AKRALETEMPIMVQIQELVRG--AKNAVSLAQGVV-YW----QPPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVK   79 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~-~~----~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~~~~~~a~   79 (400)
                      +.|+.....+.+..+.+.++.  ++++|+|+.|.+ +.    .+++.+.+++.+ .+..+....|++..|.+++++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~   84 (412)
T 1yaa_A            5 FNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAK   84 (412)
T ss_dssp             TTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHH
T ss_pred             hccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHH
Confidence            455555554555556666553  578999999984 33    467899999998 8765445678888899999999999


Q ss_pred             HHHhhcC--CCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCH
Q 015768           80 KLNQENK--LYKSSVMV--TAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDA  152 (400)
Q Consensus        80 ~l~~~~~--~~~~~i~~--~~g~t~a~~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~  152 (400)
                      ++.+.+|  +++++|++  |+|+++|++.++  ..+.++||+|+++.|+|+++...++..|++++.+ |. +++++.+|+
T Consensus        85 ~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~  163 (412)
T 1yaa_A           85 IIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATY-PYWANETKSLDL  163 (412)
T ss_dssp             HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEE-ECEETTTTEECH
T ss_pred             HHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEE-eeecCCCCccCH
Confidence            9976655  35789999  999999999984  3444699999999999999999999999999999 87 544567899


Q ss_pred             HHHHHhhccCCCC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC---C--Cccc-c-CCC--
Q 015768          153 DWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG---R--KHCC-V-EGD--  222 (400)
Q Consensus       153 e~l~~~l~~~~~~-~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~---~--~~~~-~-~~~--  222 (400)
                      +.+++.+++.+.. +++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++   .  +... . ..+  
T Consensus       164 ~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (412)
T 1yaa_A          164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV  243 (412)
T ss_dssp             HHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTT
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCC
Confidence            9999998754212 445558999999999999999999999999999999999999887754   1  1111 1 234  


Q ss_pred             -cEEEEeccccccCCCcceeEEEE--c----cCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cH
Q 015768          223 -HVVNLFSFSKAYGMMGWRVGYIA--Y----PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PE  285 (400)
Q Consensus       223 -~~i~~~s~sK~~g~~g~~~G~i~--~----~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~  285 (400)
                       ++++++|+||.+|++|+|+||++  .    ++  ++    +++.+.........+++.+.+.++..+|+..      .+
T Consensus       244 ~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  321 (412)
T 1yaa_A          244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN--KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHK  321 (412)
T ss_dssp             CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             cceEEEeccCCCCCCcCCcceEEEEEecCCCCC--HHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHH
Confidence             78999999999997799999998  7    22  55    7777776444444566889999999999874      24


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEE
Q 015768          286 WVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI  362 (400)
Q Consensus       286 ~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi  362 (400)
                      +.++++++++++++.+.+.|++++   .+.+..+.+++++|+.++     .+.+ .++++++||.+.+        ++||
T Consensus       322 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~l~~~gi~v~~--------~~Ri  387 (412)
T 1yaa_A          322 DMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT-----PQMV-KRLEETHAVYLVA--------SGRA  387 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC-----HHHH-HHHHHHHCEECCT--------TSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC-----HHHH-HHHHHhCCEEecc--------CcEE
Confidence            678888999999999999999876   356777777899987664     3445 5666689999986        4799


Q ss_pred             EeccCCHHHHHHHHHHHHHHHHH
Q 015768          363 SFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      +++..+++++++++++|+++++.
T Consensus       388 s~~~~~~~~i~~~~~~l~~~~~~  410 (412)
T 1yaa_A          388 SIAGLNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             EGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             EEccCCHhHHHHHHHHHHHHHHh
Confidence            99866899999999999998864

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=6.9e-42  Score=328.54  Aligned_cols=353  Identities=19%  Similarity=0.245  Sum_probs=278.2

Q ss_pred             cCCCeE-EcCCCCCCCCCc--HHHHHHHHHhhcC-------CC----CCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCc
Q 015768           28 GAKNAV-SLAQGVVYWQPP--KMAMEKVKELVWD-------PS----ISKYGADEGLPELRDALVKKLNQENK--LYKSS   91 (400)
Q Consensus        28 ~~~~~i-~~~~~~~~~~~~--~~v~~a~~~~~~~-------~~----~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~   91 (400)
                      ..+++| +|+.|.+..+++  +.+.+++.+.+.+       +.    ...|++..|.+++|+++++++.+.+|  +++++
T Consensus        29 ~~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~  108 (444)
T 3if2_A           29 KSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSEN  108 (444)
T ss_dssp             HSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred             cCchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHH
Confidence            348899 999998877422  4455566666655       31    25688888999999999999988875  46899


Q ss_pred             EEEeCChHHHHHHHHHHhcCCCC--------------EEEEe-CCCccchhHH------HHhcCcEEEEeccCCC-C---
Q 015768           92 VMVTAGANQAFVNIVLTLCDAGD--------------SVVMF-APYYFNSYMS------FQMTGVTHILVGPCSS-K---  146 (400)
Q Consensus        92 i~~~~g~t~a~~~~~~~l~~~gd--------------~vlv~-~p~~~~~~~~------~~~~g~~~~~~~~~~~-~---  146 (400)
                      |++|+|+|+|++.++.++.++||              +|+++ .|+|+++...      +...|..++.+ +.++ +   
T Consensus       109 i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~  187 (444)
T 3if2_A          109 IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEV-THDGEEGFF  187 (444)
T ss_dssp             EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEE-EETTEEEEE
T ss_pred             EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEec-ccccccCcc
Confidence            99999999999999999999988              78775 9999888763      45567788877 7664 2   


Q ss_pred             CCCCCHHHHHHh---hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCC
Q 015768          147 TLHPDADWLEKT---LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEG  221 (400)
Q Consensus       147 ~~~~~~e~l~~~---l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~  221 (400)
                      ++.+|++.|++.   +.++  +++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.....  .......
T Consensus       188 ~~~~d~~~l~~~l~~~~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~  265 (444)
T 3if2_A          188 KYRVDFEALENLPALKEGR--IGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWD  265 (444)
T ss_dssp             EEECCHHHHHTCHHHHTTC--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCC
T ss_pred             ccCCCHHHHHHHHHhcCCC--ceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCC
Confidence            256899999998   4444  49999999999999999999999999999999999999999985432111  1111235


Q ss_pred             CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHH-HHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNR  298 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~  298 (400)
                      +++++++|+||. +++|+|+||++.+   +++++.+.......+++++++.+.++..+++...  ++..+ +.+.+++++
T Consensus       266 ~~~i~~~S~sK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  341 (444)
T 3if2_A          266 NNTILCFSLSKI-GLPGMRTGIIVAD---AKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQA  341 (444)
T ss_dssp             TTEEEEEESTTT-TCGGGCCEEEECC---HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHH
T ss_pred             CCEEEEechhhc-cCCCCceEEEEEC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence            788999999997 6799999999998   8888888887776677889999999999998643  22223 455667777


Q ss_pred             HHHHHHhcc-CCC--CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC----------CCeEEEEec
Q 015768          299 EIIREALSP-LGE--GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----------RGHLRISFG  365 (400)
Q Consensus       299 ~~l~~~L~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----------~~~iRi~~~  365 (400)
                      +.+.+.|.+ ++.  +.+..+.+++++|+.++....+..+++..| .++||.+.||..|..          ++++||+++
T Consensus       342 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~  420 (444)
T 3if2_A          342 TLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIA  420 (444)
T ss_dssp             HHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESS
T ss_pred             HHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEe
Confidence            777777665 332  355667779999999986334788888877 489999999998842          268999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          366 GLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       366 ~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      . +++++++++++|+++++++.++
T Consensus       421 ~-~~e~i~~~l~~l~~~~~~~~~~  443 (444)
T 3if2_A          421 A-DEQTLIDGIKVIGEVVRELYDN  443 (444)
T ss_dssp             S-CHHHHHHHHHHHHHHHHHHHTC
T ss_pred             C-CHHHHHHHHHHHHHHHHHHHcc
Confidence            8 9999999999999999987653

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=9.5e-42  Score=322.82  Aligned_cols=355  Identities=18%  Similarity=0.126  Sum_probs=278.0

Q ss_pred             cCchHHHHHHHHHhc--CCCeEEcCCC---CCCCCC--cHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc
Q 015768           14 TEMPIMVQIQELVRG--AKNAVSLAQG---VVYWQP--PKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQEN   85 (400)
Q Consensus        14 ~~~~~~~~~~~~~~~--~~~~i~~~~~---~~~~~~--~~~v~~a~~~-~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~   85 (400)
                      ........+.+.+..  .+++++|+.|   +++.++  ++.+++++.+ .+.+.....|++..|..++++++++++.+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~   87 (397)
T 3fsl_A            8 YAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGAD   87 (397)
T ss_dssp             CCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTT
T ss_pred             CCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCC
Confidence            334444455555443  3579999999   455543  4899999999 8876556778888899999999999997665


Q ss_pred             CC--CCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHh
Q 015768           86 KL--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKT  158 (400)
Q Consensus        86 ~~--~~~--~i~~~~g~t~a~~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~  158 (400)
                      +.  +++  +|++|+|++++++.++  .++.++||+|+++.|+|+++...++..|.+++.+ |.. ++++.+|++.+++.
T Consensus        88 ~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~  166 (397)
T 3fsl_A           88 HPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTY-PWYDEATNGVRFNDLLAT  166 (397)
T ss_dssp             CHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEE-CCEETTTTEECHHHHHHH
T ss_pred             cccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEE-eeeeccCCcCcHHHHHHH
Confidence            42  577  8999999999999995  4557899999999999999999999999999999 873 34567899999999


Q ss_pred             hccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC-Ccc-----ccCCCcEEEEeccc
Q 015768          159 LETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-KHC-----CVEGDHVVNLFSFS  231 (400)
Q Consensus       159 l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~-----~~~~~~~i~~~s~s  231 (400)
                      ++.. +..+++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++. ...     ....+++++++|+|
T Consensus       167 l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S  246 (397)
T 3fsl_A          167 LKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFS  246 (397)
T ss_dssp             HTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECT
T ss_pred             HHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccc
Confidence            9832 2247888889999999999999999999999999999999999999887631 111     12467889999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHH----HhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHH
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREII  301 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l  301 (400)
                      |.+|++|+|+||++.+...++.++.+.    ........+++.+.+.++..++...      .++.++++++++++++.+
T Consensus       247 K~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  326 (397)
T 3fsl_A          247 KIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQEL  326 (397)
T ss_dssp             TTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999975221155554432    2222334556788888888888753      356778889999999999


Q ss_pred             HHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHH
Q 015768          302 REALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR  378 (400)
Q Consensus       302 ~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~  378 (400)
                      .+.|++++   ++.+..+.+++|+|++++     .+.+ ..+++++||.+.||.        |++++..+++++++++++
T Consensus       327 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~  392 (397)
T 3fsl_A          327 VKVLSTEMPERNFDYLLNQRGMFSYTGLS-----AAQV-DRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKA  392 (397)
T ss_dssp             HHHHHHHCTTSCCTHHHHCCSSEEECCCC-----HHHH-HHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHH
T ss_pred             HHHHHhcCCCCCceeecCCceEEEecCCC-----HHHH-HHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHH
Confidence            99999874   456777777999998875     3344 445568999999874        999987677889999999


Q ss_pred             HHHHH
Q 015768          379 LRRGL  383 (400)
Q Consensus       379 l~~~l  383 (400)
                      |++++
T Consensus       393 l~~~l  397 (397)
T 3fsl_A          393 FAAVM  397 (397)
T ss_dssp             HHHHC
T ss_pred             HHhhC
Confidence            98763

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.8e-41  Score=309.12  Aligned_cols=323  Identities=22%  Similarity=0.300  Sum_probs=264.4

Q ss_pred             HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        26 ~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      .+..+++|+|+.+.+++++++.+++++.+....  ...| +..+..++++++++++    ++++++|++|+|+++++..+
T Consensus        12 ~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~i~~t~G~~~~l~~~   84 (337)
T 3p1t_A           12 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHF----SCPEDNLMLVRGIDECFDRI   84 (337)
T ss_dssp             --CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHH
T ss_pred             ccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHH
Confidence            456678999999999999999999999998765  4567 4567889999999987    78889999999999999999


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      +.++  +||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++.  .+  .+++++++|+||||.++|   
T Consensus        85 ~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~--~~--~~~v~i~~p~nptG~~~~---  153 (337)
T 3p1t_A           85 SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEI-GLTDD-LLLDPNDLAQV--SR--DDCVVLANPSNPTGQALS---  153 (337)
T ss_dssp             HHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEE-CBCTT-SSBCHHHHTTC--CT--TEEEEEESSCTTTCCCCC---
T ss_pred             HHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHhh--cC--CCEEEEeCCCCCCCCCCC---
Confidence            9998  89999999999999999999999999999 87654 57899998876  23  489999999999999999   


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      ++++.++|+++++ +|+||+|..+...+.. .....+++++++|+||.+|++|+|+||++.+   +++++.+.....  .
T Consensus       154 ~~~l~~l~~~~~~-~ivDea~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~  226 (337)
T 3p1t_A          154 AGELDQLRQRAGK-LLIDETYVDYSSFRAR-GLAYGENELVFRSFSKSYGLAGLRLGALFGP---SELIAAMKRKQW--F  226 (337)
T ss_dssp             HHHHHHHHHHCSE-EEEECTTGGGSSCSSS-CCCCBTTEEEEEESSSTTCCTTTCCEEEECC---HHHHHHHHTTSC--T
T ss_pred             HHHHHHHHHhCCc-EEEECCChhhcccccc-ccccCCCEEEEeeCchhccCcchheEEEEeC---HHHHHHHHhhcC--C
Confidence            5556666778886 6669999987654422 2233567899999999999899999999998   788888876543  5


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  345 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  345 (400)
                      ++++.+.+.++..+++. .++..+..+++.++++++.+.|++++. .+..+. +.|+|+..+.    ...+...| .++|
T Consensus       227 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~----~~~~~~~l-~~~g  298 (337)
T 3p1t_A          227 CNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGY-RVASSE-ANFVLVENAA----GERTLRFL-RERG  298 (337)
T ss_dssp             TCSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBCCCS-SSEEEEECTT----THHHHHHH-HHTT
T ss_pred             CCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-EECCCC-CeEEEEEcCC----HHHHHHHH-HHCC
Confidence            67888999999989886 345567777888889999999998854 666666 5677777753    45666655 5889


Q ss_pred             eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      |.+.+|..|+.++++|++++  ++++++++++.|++++
T Consensus       299 i~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          299 IQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYS  334 (337)
T ss_dssp             EECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred             eEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHh
Confidence            99999999988899999998  5888888888777654

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=3.7e-42  Score=336.28  Aligned_cols=348  Identities=18%  Similarity=0.237  Sum_probs=282.3

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhh-cC-CC---CCcEEEeCChHHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQE-NK-LY---KSSVMVTAGANQAFVN  104 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~-~~-~~---~~~i~~~~g~t~a~~~  104 (400)
                      ++++|+.+.++++ ++++++++.+.+...   .|. +..|..++++++++++.+. .+ ++   +++|++|+|+|+++..
T Consensus       104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~  179 (533)
T 3f6t_A          104 DAVNYCHTELGLN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVY  179 (533)
T ss_dssp             HHHHHHHHTTCCC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHH
T ss_pred             hheeccCCCCCcC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHH
Confidence            4788998888885 677777776666542   344 6788999999999999776 34 33   4799999999999999


Q ss_pred             HHHH-----hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC---CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768          105 IVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS---SKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (400)
Q Consensus       105 ~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np  176 (400)
                      ++.+     ++++||+|+++.|+|.++...++..|.+++.+ +.+   ++++.+|++.+++.+.+++  ++|++++|+||
T Consensus       180 ~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~d~~~l~~~l~~~~--k~v~l~~p~NP  256 (533)
T 3f6t_A          180 AFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEV-DLHSYEKNDWEIEPNEIEKLKDPSI--KALIVVNPTNP  256 (533)
T ss_dssp             HHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEE-CCCEETTTTSEECHHHHHHHSCTTE--EEEEEESSCTT
T ss_pred             HHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEE-EecCCcccCCCCCHHHHHHHhCCCC--eEEEEeCCCCC
Confidence            9998     78999999999999999999999999999988 776   3557889999999987654  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHH-HcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          177 SGTYIPERLLKRISDLCK-AAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~-~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      ||.+++.+++++|+++|+ +||+++|+||+|+.+.++.........+++++++|+||.+|++|+|+||++.++  +++++
T Consensus       257 tG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--~~~~~  334 (533)
T 3f6t_A          257 TSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNE--KNVFD  334 (533)
T ss_dssp             TCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEES--SCHHH
T ss_pred             CccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECc--HHHHH
Confidence            999999999999999999 689999999999988875444333345788999999999999999999999885  22222


Q ss_pred             HH------------------------------------HHhhccCCcCccHHHHHH----HHHHhc------CCcHHHHH
Q 015768          256 QL------------------------------------LKVQDNIPICASIISQHL----ALYSLQ------TGPEWVTE  289 (400)
Q Consensus       256 ~l------------------------------------~~~~~~~~~~~~~~~~~~----~~~~l~------~~~~~~~~  289 (400)
                      ++                                    .......+.+++.+.|.+    +..+|.      ...++.++
T Consensus       335 ~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~  414 (533)
T 3f6t_A          335 DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDI  414 (533)
T ss_dssp             HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHH
T ss_pred             HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHH
Confidence            22                                    223334455678888887    455664      23477889


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---------------CCCHHHHHHHHHHhcCeEEeCCCcc
Q 015768          290 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGAC  354 (400)
Q Consensus       290 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~gi~v~~g~~~  354 (400)
                      +++.++++++.+.+.|. ++. .+..+.+++|+|++++..               ..+..+++.++++++||.+.||..|
T Consensus       415 ~~~~~~~r~~~l~~~L~-~~~-~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f  492 (533)
T 3f6t_A          415 ARKLVSERYDQLHDAMQ-APK-DETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGF  492 (533)
T ss_dssp             HHHHHHHHHHHHHHHHT-CCC-CCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEE
T ss_pred             HHHHHHHHHHHHHHhcC-CCc-cccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCccc
Confidence            99999999999999997 654 667788899999988631               0245677778888899999999988


Q ss_pred             CC-CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          355 GC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       355 ~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      +. ++++||+++..+++++++++++|+++++++.++
T Consensus       493 ~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~  528 (533)
T 3f6t_A          493 GAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEE  528 (533)
T ss_dssp             CSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence            75 689999998778999999999999999987653

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=4.9e-46  Score=351.67  Aligned_cols=346  Identities=17%  Similarity=0.212  Sum_probs=289.7

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      +++++|+.+++++++|+++++++.+.+.+. ...|++.  ..++++++++++.+.+|  +++++|++|+|+++++..++.
T Consensus        31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~  107 (392)
T 3b1d_A           31 PQLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQ  107 (392)
Confidence            389999999999999999999999888653 4556543  78899999999988887  568899999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CC-CCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SK-TLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      ++.++||+|+++.|+|+++...++..|.+++.+ |.+ ++ ++.+|++.+++.++ .+  +++|++++|+||||.+++.+
T Consensus       108 ~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~~--~~~v~~~~~~nptG~~~~~~  184 (392)
T 3b1d_A          108 AFTKEGEAVLINSPVYPPFARSVRLNNRKLVSN-SLKEENGLFQIDFEQLENDIVEND--VKLYLLCNPHNPGGRVWERE  184 (392)
Confidence            999999999999999999999999999999888 774 33 36689999999887 44  48999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCc---ccc-C--CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCV-E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  258 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~-~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~  258 (400)
                      ++++|+++|++||+++|+||+|..+.+++...   ... .  .+++++++|+||.+|++|+|+||+++++  +++++.+.
T Consensus       185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~~  262 (392)
T 3b1d_A          185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIEN--PTLCAQFK  262 (392)
Confidence            99999999999999999999999988765321   111 1  4678999999999988999999999874  45778777


Q ss_pred             HhhccCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHH
Q 015768          259 KVQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       259 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (400)
                      ......++ +++.+.+.++..+|+...+++++.++.+.++++.+.+.|++ ++.+.+..+.+++++|++++....+..++
T Consensus       263 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  342 (392)
T 3b1d_A          263 HQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDAL  342 (392)
Confidence            76654433 56888899888888865577888889999999999999988 66667778887888889987532356678


Q ss_pred             HHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          337 VRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ...|++++||.+.||..|+  .++++||+++. +++++++++++|+++++
T Consensus       343 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          343 FTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP  391 (392)
Confidence            8877667899999998886  46799999986 78999999999998875

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=8.6e-42  Score=324.38  Aligned_cols=360  Identities=15%  Similarity=0.105  Sum_probs=273.0

Q ss_pred             hHHHHhhhcCchH-HHHHHHHHhc-CCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            6 KLAKRALETEMPI-MVQIQELVRG-AKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         6 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +.+.|+.....+. +....++.++ .+++|+|+.|.+ +++.++.+.+++.++.. .....|++..|.+++++++++++.
T Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr~~ia~~~~   93 (409)
T 4eu1_A           15 QTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATL-GTNMDYAPVTGIASFVEEAQKLCF   93 (409)
T ss_dssp             ------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             hHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCc-cccccCCCCCCcHHHHHHHHHHHc
Confidence            4566777655443 3333334333 467999999996 88777788888888733 335678888999999999999985


Q ss_pred             hhcCC--CCCcEE--EeCChHHHHHHHH---HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHH
Q 015768           83 QENKL--YKSSVM--VTAGANQAFVNIV---LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADW  154 (400)
Q Consensus        83 ~~~~~--~~~~i~--~~~g~t~a~~~~~---~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~  154 (400)
                      ...+.  ++++|.  .+.++++++..+.   .++.++||+|+++.|+|.++...++..|.+++.+ |.+ ++++.+|++.
T Consensus        94 ~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~  172 (409)
T 4eu1_A           94 GPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPY-SYYDPATKGLNLAG  172 (409)
T ss_dssp             CSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEE-CCEETTTTEECHHH
T ss_pred             CCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEE-EeecCcCCcCcHHH
Confidence            33221  167784  4899999988764   4456899999999999999999999999999999 873 4567889999


Q ss_pred             HHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC-----Ccc--ccCCCcEEE
Q 015768          155 LEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-----KHC--CVEGDHVVN  226 (400)
Q Consensus       155 l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~--~~~~~~~i~  226 (400)
                      +++.++.. ...+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.     ...  ....+++++
T Consensus       173 l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~  252 (409)
T 4eu1_A          173 MLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIV  252 (409)
T ss_dssp             HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEE
T ss_pred             HHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEE
Confidence            99999732 2246677789999999999999999999999999999999999999887652     111  123467789


Q ss_pred             EeccccccCCCcceeEEE--EccCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMGWRVGYI--AYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDL  294 (400)
Q Consensus       227 ~~s~sK~~g~~g~~~G~i--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~  294 (400)
                      ++|+||.+|++|+|+||+  +..+  ++    +.+.+.........+++.+.+.++..+|+..      .++..++++++
T Consensus       253 ~~S~SK~~g~~G~riG~~~~v~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  330 (409)
T 4eu1_A          253 AQSFSKNFGLYGHRCGALHISTAS--AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRI  330 (409)
T ss_dssp             EEECTTTSSCGGGCCEEEEEECSS--HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCcccccCccCCceEEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997  5554  66    6666666554556677889999999999864      23467788899


Q ss_pred             HHHHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHH
Q 015768          295 VRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD  371 (400)
Q Consensus       295 ~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~  371 (400)
                      +++++.+.+.|++++.   +.+..+.++++.|+.++      .+++.++++++||.+.||.        ||+++..++++
T Consensus       331 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~  396 (409)
T 4eu1_A          331 AEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT------REQVELLRSEYHIYMTLNG--------RAAVSGLNSTN  396 (409)
T ss_dssp             HHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTT
T ss_pred             HHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC------HHHHHHHHHcCCEEEcCCC--------EEEEEecCHhh
Confidence            9999999999998763   46667788999997664      3556777778899999863        99998777888


Q ss_pred             HHHHHHHHHHHH
Q 015768          372 CKAAADRLRRGL  383 (400)
Q Consensus       372 ~~~~~~~l~~~l  383 (400)
                      +++++++|++++
T Consensus       397 i~~~~~~l~~~l  408 (409)
T 4eu1_A          397 VEYVSQAIHNVT  408 (409)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999998875

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=3.1e-41  Score=319.78  Aligned_cols=339  Identities=16%  Similarity=0.109  Sum_probs=269.0

Q ss_pred             CCeEEcCCCCC-CCC-Cc---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEE--eCChHH
Q 015768           30 KNAVSLAQGVV-YWQ-PP---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMV--TAGANQ  100 (400)
Q Consensus        30 ~~~i~~~~~~~-~~~-~~---~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~--~~g~t~  100 (400)
                      ++.|+|+.|.+ +.. +|   +.+.+++.+.........|.+..|.+++|+++++++.+.+|.  ++++|++  |+|+++
T Consensus        28 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~  107 (401)
T 7aat_A           28 SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTG  107 (401)
T ss_dssp             TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred             CCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchH
Confidence            45899999986 553 22   467887777766444677888889999999999999877764  4889977  999999


Q ss_pred             HHHHHHHHhc---CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCC
Q 015768          101 AFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLET-KPTPKLVSVVNPGN  175 (400)
Q Consensus       101 a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~n  175 (400)
                      +++.++.++.   +|||+|+++.|+|.++...++..|.+++.+ |.+ ++++.+|++.+++.+.. ....+++++++|||
T Consensus       108 al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~N  186 (401)
T 7aat_A          108 SLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY-RYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHN  186 (401)
T ss_dssp             HHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCT
T ss_pred             HHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEee-eeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence            9999887765   899999999999999999999999999999 874 33467899987777763 12248899999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cc-----ccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HC-----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~-----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      |||.+++.+++++|+++|++||+++|+||+|..+.+++..  ..     ....+++++++|+||.+|++|+|+||++...
T Consensus       187 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~  266 (401)
T 7aat_A          187 PTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVIC  266 (401)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEe
Confidence            9999999999999999999999999999999988876531  11     1245788999999999999999999987622


Q ss_pred             CcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHhccCC---CCcccC
Q 015768          249 EVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAVKG  315 (400)
Q Consensus       249 ~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~  315 (400)
                      ..++    +.+.+.........+++...+.++..++..+      .+++++++++++++++++.+.|++++   .+.+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~  346 (401)
T 7aat_A          267 RDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIT  346 (401)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceec
Confidence            1145    4455555554455667778888887777653      34567778889999999999998874   246667


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      |.+++|.|+.++     . +.+..+++++||.+.++        +|++++..+.+++++++++|++++
T Consensus       347 ~~~~~~~~~~~~-----~-~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          347 DQIGMFCFTGLK-----P-EQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             HCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             CCcceEEecCCC-----H-HHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHHHh
Confidence            888999998764     3 44466777899999865        599998766777999999998875

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=2.1e-41  Score=325.02  Aligned_cols=362  Identities=16%  Similarity=0.151  Sum_probs=281.7

Q ss_pred             hhHHHHhhhcCch-HHHHHHHHHhcCCC-eEEcCCCCC-CCCC----cHHHHHHHHHhh--cCCCCCCCCCCCCcHHHHH
Q 015768            5 AKLAKRALETEMP-IMVQIQELVRGAKN-AVSLAQGVV-YWQP----PKMAMEKVKELV--WDPSISKYGADEGLPELRD   75 (400)
Q Consensus         5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~i~~~~~~~-~~~~----~~~v~~a~~~~~--~~~~~~~y~~~~g~~~~~~   75 (400)
                      |+...++...... .+.....+.+++.+ .|+|+.|.+ ++..    .+.+.+++.+..  .......|.+..|.+++++
T Consensus        22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~  101 (448)
T 3meb_A           22 MSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLE  101 (448)
T ss_dssp             CCTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHH
T ss_pred             hhHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHH
Confidence            3344555554443 34444444455544 799999986 6543    345555554444  2233567888899999999


Q ss_pred             HHHHHHHhhcCCC-----CCcEEE--eCChHHHHHH--HHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEecc
Q 015768           76 ALVKKLNQENKLY-----KSSVMV--TAGANQAFVN--IVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGP  142 (400)
Q Consensus        76 ~~a~~l~~~~~~~-----~~~i~~--~~g~t~a~~~--~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~  142 (400)
                      ++++++.   |..     +++|++  |+|+|+|++.  .+.++..+||+|++++|+|.++...++    ..|++++.+ |
T Consensus       102 ~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~-~  177 (448)
T 3meb_A          102 AAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEY-T  177 (448)
T ss_dssp             HHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEE-C
T ss_pred             HHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEE-e
Confidence            9999984   544     689999  9999999988  455677899999999999999999999    999999999 8


Q ss_pred             C-CCC-CCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--c-
Q 015768          143 C-SSK-TLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--H-  216 (400)
Q Consensus       143 ~-~~~-~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~-  216 (400)
                      . +++ ++.+|++.+++.++..+ ..+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..  . 
T Consensus       178 ~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~  257 (448)
T 3meb_A          178 YLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAF  257 (448)
T ss_dssp             CBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTH
T ss_pred             ccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCch
Confidence            7 665 57899999999998421 2477788899999999999999999999999999999999999988876521  1 


Q ss_pred             --c--ccCCCcEEEEeccccccCCCcceeEEE--Ec--------cCCcH----HHHHHHHHhhccCCcCccHHHHHHHHH
Q 015768          217 --C--CVEGDHVVNLFSFSKAYGMMGWRVGYI--AY--------PSEVE----GFATQLLKVQDNIPICASIISQHLALY  278 (400)
Q Consensus       217 --~--~~~~~~~i~~~s~sK~~g~~g~~~G~i--~~--------~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (400)
                        .  ....++++++.|+||.+|++|+|+||+  +.        ++  +    ++.+.+.........+++.+.+.++..
T Consensus       258 ~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~  335 (448)
T 3meb_A          258 AVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKN--KALSAAMVSGMTLQIRKTWSMSAIHGAYIVQV  335 (448)
T ss_dssp             HHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHH--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred             hHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCC--HHHHHHHHHHHHHHHhcccCCccHHHHHHHHH
Confidence              1  123567899999999999999999998  66        43  4    566666665555566788999999999


Q ss_pred             HhcCCc------HHHHHHHHHHHHHHHHHHHHhccC--CC------CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          279 SLQTGP------EWVTERVKDLVRNREIIREALSPL--GE------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       279 ~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      +|....      +++++++++++++++.+.+.|+++  +.      +.+..+.+++|.|+.++      .+++..+++++
T Consensus       336 ~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ll~~~  409 (448)
T 3meb_A          336 IVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT------PEHVDYLKEKW  409 (448)
T ss_dssp             HHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC------HHHHHHHHHHH
T ss_pred             HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC------HHHHHHHHHhC
Confidence            988632      346778888999999999999887  33      45666778999998775      35667777789


Q ss_pred             CeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       345 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ||.+.||.       .|||++..+++++++++++|++++++
T Consensus       410 gV~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~  443 (448)
T 3meb_A          410 SIYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTK  443 (448)
T ss_dssp             CEEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             CEEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence            99999975       29999876778899999999999884

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=4.1e-41  Score=320.08  Aligned_cols=360  Identities=16%  Similarity=0.148  Sum_probs=284.2

Q ss_pred             HHhhhcCchHHHHHHHHHhc--CCCeEEcCCCCC-C----CCCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHH
Q 015768            9 KRALETEMPIMVQIQELVRG--AKNAVSLAQGVV-Y----WQPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~-~----~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      +|+.....+.+.++.+....  ++++++|+.|.+ +    ..+++.+.+++.+.+.+ .....|++..+..+++++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~   86 (412)
T 1ajs_A            7 AEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRL   86 (412)
T ss_dssp             TTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred             hhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHH
Confidence            44555555666666666553  578999999984 2    24568999999888733 2356788888999999999999


Q ss_pred             HHhhcCC--CCCcEEE--eCChHHHHHHHHH--HhcCCC-----CEEEEeCCCccchhHHHHhcCcE-EEEeccCC-CCC
Q 015768           81 LNQENKL--YKSSVMV--TAGANQAFVNIVL--TLCDAG-----DSVVMFAPYYFNSYMSFQMTGVT-HILVGPCS-SKT  147 (400)
Q Consensus        81 l~~~~~~--~~~~i~~--~~g~t~a~~~~~~--~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~-~~~  147 (400)
                      +...+++  ++++|++  |+|+++|++.++.  .+.++|     |+|+++.|+|+++...++..|++ ++.+ |.+ +++
T Consensus        87 ~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~  165 (412)
T 1ajs_A           87 ALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSY-RYWDTEK  165 (412)
T ss_dssp             HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEE-ECEETTT
T ss_pred             HhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEE-eeecCCC
Confidence            9755553  5789999  9999999999965  445789     99999999999999999999999 9988 774 245


Q ss_pred             CCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC---CC--cc--cc
Q 015768          148 LHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG---RK--HC--CV  219 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~---~~--~~--~~  219 (400)
                      +.+|++.+++.+++. +..+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++   ..  ..  ..
T Consensus       166 ~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~  245 (412)
T 1ajs_A          166 RGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS  245 (412)
T ss_dssp             TEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred             CccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc
Confidence            678999999998742 223777789999999999999999999999999999999999999888764   21  11  11


Q ss_pred             CCCcEEEEeccccccCCCcceeEEEEc---cCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHH
Q 015768          220 EGDHVVNLFSFSKAYGMMGWRVGYIAY---PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEW  286 (400)
Q Consensus       220 ~~~~~i~~~s~sK~~g~~g~~~G~i~~---~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~  286 (400)
                      ..++++++.|+||.+|++|+|+||++.   +   ++    +++.+.........+++.+.+.++..+|+..      .++
T Consensus       246 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  322 (412)
T 1ajs_A          246 EGFELFCAQSFSKNFGLYNERVGNLTVVAKE---PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGN  322 (412)
T ss_dssp             TTCCEEEEEECTTTSCCGGGCEEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             cCCcEEEEEecccccCCCCcceEEEEEecCC---HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHH
Confidence            357789999999999978999999998   5   55    4444544333333346889999999999864      246


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEE
Q 015768          287 VTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS  363 (400)
Q Consensus       287 ~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~  363 (400)
                      .++..++++++++++.+.|++++   .+.+..+.+++++|+.++      .+++..+++++||.+.|+        +|++
T Consensus       323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gv~v~~~--------~Ris  388 (412)
T 1ajs_A          323 VKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN------PKQVEYLINQKHIYLLPS--------GRIN  388 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC------HHHHHHHHHTTCEECCTT--------SEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC------HHHHHHHHHhCCEEecCC--------cEEE
Confidence            77888899999999999999876   356666777899998764      345556667899999874        5999


Q ss_pred             eccCCHHHHHHHHHHHHHHHHHH
Q 015768          364 FGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       364 ~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++..+++++++++++|+++++++
T Consensus       389 ~~~~~~~~i~~~~~~l~~~l~~~  411 (412)
T 1ajs_A          389 MCGLTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             GGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             eeeCCHHHHHHHHHHHHHHHHhc
Confidence            99668999999999999998753

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=5e-41  Score=312.49  Aligned_cols=325  Identities=19%  Similarity=0.242  Sum_probs=261.6

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      +++++++|+.+.+++++++++++++.+.+..  ...|+...+ .++++++++++    ++++++|++|+|+++++..++.
T Consensus        13 ~g~~~id~~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~i~~t~g~~~al~~~~~   85 (350)
T 3fkd_A           13 LSSEIVNFSTTVWTDGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN----SVDNNAILVTNGPTAAFYQIAQ   85 (350)
T ss_dssp             ---CCEECSCCSCCCSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT----TCCGGGEEEESHHHHHHHHHHH
T ss_pred             ccccEEEccCCCCCCCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence            4589999999999999999999999988843  566765555 78898888887    7888999999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      ++.  ||+|+++.|+|.++...++..|++++.+ |. ++.+ .+++        ++  +++|++++|+||||.++|.+++
T Consensus        86 ~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~~--------~~--~~~v~i~~p~nptG~~~~~~~l  151 (350)
T 3fkd_A           86 AFR--GSRSLIAIPSFAEYEDACRMYEHEVCFY-PSNEDIG-EADF--------SN--MDFCWLCNPNNPDGRLLQRTEI  151 (350)
T ss_dssp             HTT--TCEEEEEESCCHHHHHHHHHTTCEEEEE-ETTSCGG-GSCC--------TT--CSEEEEESSCTTTCCCCCHHHH
T ss_pred             HHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEE-ecCCccc-cCcc--------CC--CCEEEEeCCCCCcCCCCCHHHH
Confidence            998  9999999999999999999999999999 87 5422 2232        23  4999999999999999998888


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      .+|++.|+++  ++|+||+|..+.+.+...  .....+++++++|+||.+|++|+|+||++.+   +++++.+.....  
T Consensus       152 ~~l~~~~~~~--~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~--  224 (350)
T 3fkd_A          152 LRLLNDHPDT--TFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN---KDFMKRVAAFST--  224 (350)
T ss_dssp             HHHHHHCTTS--EEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC---HHHHHHHHTTCC--
T ss_pred             HHHHHhCCCC--EEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeC---HHHHHHHHHhCC--
Confidence            8888877654  999999999887765432  1224578899999999999899999999997   899998887664  


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      +++++.+.+.++..+|+...++.++..+. .++++++.+.|++++++.+.++. ++|+|+.++..  +..++..+|.+++
T Consensus       225 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~L~~~~  300 (350)
T 3fkd_A          225 PWAVNALAIEAAKFILIHPAQFTLPIRKW-QRNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG--TAAELKKYMLEEY  300 (350)
T ss_dssp             TTCSCHHHHHHHHHHHHCTTTTCCCHHHH-HHHHHHHHHHHHHSTTEEECCCS-SSEEEEEESSS--CHHHHHHHHHHTT
T ss_pred             CCCCCHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEECCCC-CcEEEEECCCC--CHHHHHHHHHHHC
Confidence            56789999999999998754344343333 38889999999888665666554 77888888764  6888999887549


Q ss_pred             CeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       345 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ||.+.||..|+.  ++++||+++  +.++++++++.|++.+++.
T Consensus       301 gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~~  342 (350)
T 3fkd_A          301 NMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEKY  342 (350)
T ss_dssp             CEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC-
T ss_pred             CEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHHh
Confidence            999999998864  789999998  4777777777777666543

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=6.9e-40  Score=307.04  Aligned_cols=328  Identities=21%  Similarity=0.293  Sum_probs=269.6

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .|+|+.+.+++++++++++++.+.+.+.  ....|+...+ .++++++++++.+.+|  +++++|++|+|++++++.++.
T Consensus        32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~  110 (369)
T 3cq5_A           32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQ  110 (369)
T ss_dssp             SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred             ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHH
Confidence            4999999998889999999998887642  1456755545 7999999999988765  457899999999999999999


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      ++.++||+|+++.|+|+++...++..|.+++.+ |.++ ++.+|++.+++.+++ ++  ++|++++|+||||.++|.   
T Consensus       111 ~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~~---  183 (369)
T 3cq5_A          111 AFGGPGRTALGFQPSYSMHPILAKGTHTEFIAV-SRGA-DFRIDMDVALEEIRAKQP--DIVFVTTPNNPTGDVTSL---  183 (369)
T ss_dssp             HHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEE-ECCT-TSSCCHHHHHHHHHHHCC--SEEEEESSCTTTCCCCCH---
T ss_pred             HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCc-CCCCCHHHHHHHhhccCC--CEEEEeCCCCCCCCCCCH---
Confidence            999999999999999999999999999999999 7664 356899999999876 54  899999999999999995   


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCccc-cCCC-cEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~-~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      +++.++|+.+++++|+||+|+.+..+...... ...+ ++++++|+||++|++|+|+||++.+   +++++.+.....  
T Consensus       184 ~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~--  258 (369)
T 3cq5_A          184 DDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN---PAFIDAVMLVRL--  258 (369)
T ss_dssp             HHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC---THHHHHHHTTSC--
T ss_pred             HHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC---HHHHHHHHHcCC--
Confidence            55555555667999999999988754221111 2235 7899999999998899999999998   678888876554  


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      +++++.+.+.++..+++. .+++++..++++++++++.+.|++.+ +.+.++ .++|+|++++   .+..++..+|. ++
T Consensus       259 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~~~~---~~~~~l~~~l~-~~  331 (369)
T 3cq5_A          259 PYHLSALSQAAAIVALRH-SADTLGTVEKLSVERVRVAARLEELG-YAVVPS-ESNFVFFGDF---SDQHAAWQAFL-DR  331 (369)
T ss_dssp             TTCSCHHHHHHHHHHHHT-HHHHHTHHHHHHHHHHHHHHHHHHHT-CEEECC-SSSEEEEECC---SSHHHHHHHHH-HT
T ss_pred             CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCC-CCeEEEEECC---CCHHHHHHHHH-HC
Confidence            567899999999999986 46778888899999999999998865 355544 4778898887   25778888775 89


Q ss_pred             CeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          345 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       345 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      ||.+.+|   +.++++|++++  +++++++++++|+++++
T Consensus       332 gi~v~~~---~~~~~iRis~~--~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          332 GVLIRDV---GIAGHLRTTIG--VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             TEECBCC---SCTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEC---CCCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence            9999998   24689999998  68999999999988764

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=2.9e-41  Score=319.33  Aligned_cols=338  Identities=16%  Similarity=0.143  Sum_probs=266.7

Q ss_pred             CCCeEEcCCCC---CCC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEE--eCChH
Q 015768           29 AKNAVSLAQGV---VYW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMV--TAGAN   99 (400)
Q Consensus        29 ~~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~--~~g~t   99 (400)
                      ++++|+|+.|.   +..  ++++.+.+++.+.+.+.....|++..+..++++++++++.+..+  +++++|++  |+|++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~  104 (396)
T 2q7w_A           25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT  104 (396)
T ss_dssp             ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred             CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccch
Confidence            46899999998   333  46789999998877544456788888999999999999965544  34789998  99999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCC-CCeEEEEeCCCC
Q 015768          100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKP-TPKLVSVVNPGN  175 (400)
Q Consensus       100 ~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~n  175 (400)
                      +|++.++.++.  ++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++.++..+ ..+++++++|+|
T Consensus       105 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~n  183 (396)
T 2q7w_A          105 GALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREY-AYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHN  183 (396)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCT
T ss_pred             hhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEE-ecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            99999998764  699999999999999999999999999999 7742 345789999999987532 247788899999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC--C--Ccc--ccCCCcEEEEeccccccCCCcceeEEEEc--c
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--R--KHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAY--P  247 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~--~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~--~  247 (400)
                      |||.+++.+++++|+++|++||+++|+||+|..+.+++  .  ...  ....+++++++|+||.+|++|+|+||++.  +
T Consensus       184 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~  263 (396)
T 2q7w_A          184 PTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAA  263 (396)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcC
Confidence            99999999999999999999999999999999887753  1  111  11246789999999999989999999986  3


Q ss_pred             CCcH----HHHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHhccCC---CCccc
Q 015768          248 SEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAVK  314 (400)
Q Consensus       248 ~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~  314 (400)
                      +  +    ++.+.+.........+++.+.+.++..+|+..      .++.++..+.++++++.+.+.|++++   .+.+.
T Consensus       264 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  341 (396)
T 2q7w_A          264 D--SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI  341 (396)
T ss_dssp             S--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHH
T ss_pred             C--HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee
Confidence            2  4    34455544333334456889999999999864      25677788889999999999999886   35666


Q ss_pred             CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      .+.+++++|+.++     . +.+..+++++||.+.||        +||+++..+++++++++++|++++
T Consensus       342 ~~~~~~~~~~~~~-----~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~l  396 (396)
T 2q7w_A          342 IKQNGMFSFSGLT-----K-EQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             HHCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             cCCCceEEEecCC-----H-HHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhcC
Confidence            7777899998764     2 34445666899999874        599998668999999999998763

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=4.4e-41  Score=328.65  Aligned_cols=361  Identities=18%  Similarity=0.261  Sum_probs=276.4

Q ss_pred             hHHHHHHHHHhcCC--C-------eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH-HhhcC
Q 015768           17 PIMVQIQELVRGAK--N-------AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL-NQENK   86 (400)
Q Consensus        17 ~~~~~~~~~~~~~~--~-------~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l-~~~~~   86 (400)
                      -.+.++.++++..+  +       .++|+.+.+.+ +++.+++++.+.+.   ...|+++.|...+++++++++ .+.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~-~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~~~  157 (546)
T 2zy4_A           82 GIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGL-DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYIIREMG  157 (546)
T ss_dssp             THHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHHHHHTT
T ss_pred             cchhHHHHHHHhcCCCCcchhHHhhhecccCCCCC-CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHHHHhcc
Confidence            44666666654432  2       78898888877 45677777777664   246988888999999987765 44433


Q ss_pred             --C---CCCcEEEeCChHHHHHHHHHH-----hcCCCCEEEEeCCCccchhHHHHh--cCcEEEEeccCCCC-CCCCCHH
Q 015768           87 --L---YKSSVMVTAGANQAFVNIVLT-----LCDAGDSVVMFAPYYFNSYMSFQM--TGVTHILVGPCSSK-TLHPDAD  153 (400)
Q Consensus        87 --~---~~~~i~~~~g~t~a~~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~--~g~~~~~~~~~~~~-~~~~~~e  153 (400)
                        .   ++++|++|+|+++++..++.+     +.++||+|++++|+|+++......  .|++++.+ |.+++ ++.+|++
T Consensus       158 ~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~  236 (546)
T 2zy4_A          158 ADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAI-NADPSLNWQYPDS  236 (546)
T ss_dssp             CTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEE-ECBGGGTTBCCHH
T ss_pred             CCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEE-ecCcccCCCCCHH
Confidence              2   358999999999999999988     578999999999999999987544  46888888 77654 4778999


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH--HHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC--KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS  231 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~--~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s  231 (400)
                      .+++.+..+  +++|++++|+||||.+++.+++++|+++|  +++|+++|+||+|+.+.++.........+++++++|+|
T Consensus       237 ~l~~~~~~~--~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~S  314 (546)
T 2zy4_A          237 ELDKLKDPA--IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFS  314 (546)
T ss_dssp             HHGGGGSTT--EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEEST
T ss_pred             HHHHhhCCC--CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCc
Confidence            999887554  49999999999999999999999999999  78999999999999887543222222346899999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHh-------------h-----------------------ccCCcCccHHHHHH
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKV-------------Q-----------------------DNIPICASIISQHL  275 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~-------------~-----------------------~~~~~~~~~~~~~~  275 (400)
                      |.+|++|+|+||+++++  +++++++...             .                       ...+.+.+.+.|.+
T Consensus       315 K~~g~~GlRiG~~~~~~--~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a  392 (546)
T 2zy4_A          315 KYFGATGWRLGVVAAHQ--QNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQ  392 (546)
T ss_dssp             TTTTCGGGCEEEEEEES--SCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHH
T ss_pred             cccCCCCcceEEEEECC--HHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHH
Confidence            99999999999999884  2355555221             0                       01223567777776


Q ss_pred             H-----HHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---------------CCCHHH
Q 015768          276 A-----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFE  335 (400)
Q Consensus       276 ~-----~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~  335 (400)
                      +     ..+++.+..+..+.++.++++++.+.+.|. .+. .+..+.+++|+|++++..               ..+..+
T Consensus       393 ~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~  470 (546)
T 2zy4_A          393 MALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-MPP-LRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGD  470 (546)
T ss_dssp             HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSC-CCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHH
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCc-ccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHH
Confidence            4     344555567888888999999999999996 443 455677889999987521               012345


Q ss_pred             HHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          336 VVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++.+++.++||.+.||..|+. ++++||+++..+++++++++++|+++++++.+
T Consensus       471 ~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~  524 (546)
T 2zy4_A          471 MLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELYA  524 (546)
T ss_dssp             HHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence            455666789999999999974 57899999876899999999999999988763

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=2.8e-40  Score=312.37  Aligned_cols=353  Identities=14%  Similarity=0.118  Sum_probs=272.1

Q ss_pred             hhcCchHHHHHHHHHh--cCCCeEEcCCCCC---CC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768           12 LETEMPIMVQIQELVR--GAKNAVSLAQGVV---YW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        12 ~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~---~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      .....+....+.+.+.  .++++++|+.|.+   ..  ++++.+.+++.+.+.++....|++..+..++++++++++...
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~   85 (394)
T 2ay1_A            6 KPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD   85 (394)
T ss_dssp             CCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG
T ss_pred             ccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC
Confidence            3333333344444333  3578999999983   22  567899999988775444567877788999999999998533


Q ss_pred             cCCCCCcEEE--eCChHHHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768           85 NKLYKSSVMV--TAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (400)
Q Consensus        85 ~~~~~~~i~~--~~g~t~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l  159 (400)
                       ++++++|++  |+|+++|++.++.++..  +||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++.+
T Consensus        86 -~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l  163 (394)
T 2ay1_A           86 -GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTY-RYFDAETRGVDFEGMKADL  163 (394)
T ss_dssp             -GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEE-ECEETTTTEECHHHHHHHH
T ss_pred             -CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEE-ecccccCCccCHHHHHHHH
Confidence             336789999  99999999999988764  99999999999999999999999999988 7742 34568999999998


Q ss_pred             ccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC--C--Ccc-c-cCCCcEEEEecccc
Q 015768          160 ETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--R--KHC-C-VEGDHVVNLFSFSK  232 (400)
Q Consensus       160 ~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~--~~~-~-~~~~~~i~~~s~sK  232 (400)
                      +..+ ..+++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++  .  ... . ...+++++++|+||
T Consensus       164 ~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  243 (394)
T 2ay1_A          164 AAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSK  243 (394)
T ss_dssp             HTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTT
T ss_pred             HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccC
Confidence            7532 23667778999999999999999999999999999999999999887653  1  111 1 12457899999999


Q ss_pred             ccCCCcceeEEEEc--cCCcHHHHHH----HHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHH
Q 015768          233 AYGMMGWRVGYIAY--PSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREI  300 (400)
Q Consensus       233 ~~g~~g~~~G~i~~--~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~  300 (400)
                      .+|++|+|+||++.  ++  +++++.    +.........+++.+.+.++..+|+..      .++.+++.+++++++++
T Consensus       244 ~~~~~G~riG~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~  321 (394)
T 2ay1_A          244 NFGIYRERTGCLLALCAD--AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQ  321 (394)
T ss_dssp             TTTCGGGCEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCccceEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99989999999987  33  554433    332222333445889999999999864      24677888899999999


Q ss_pred             HHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHH
Q 015768          301 IREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAAD  377 (400)
Q Consensus       301 l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~  377 (400)
                      +.+.|++++   .+.+..+.+++|+|+.++     .+.+ ..+++++||.+.+|        +||+++.+++++++++++
T Consensus       322 l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~-~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~  387 (394)
T 2ay1_A          322 LAGELRDLSGSDRFGFVAEHRGMFSRLGAT-----PEQV-KRIKEEFGIYMVGD--------SRINIAGLNDNTIPILAR  387 (394)
T ss_dssp             HHHHHHHHHTSSTTTHHHHCCSSEEECCCC-----HHHH-HHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHH
T ss_pred             HHHHHHhcCCCCCeeEEcCCceEEEeeCCC-----HHHH-HHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHH
Confidence            999998875   356666777899998775     3344 45556899999875        599998778999999999


Q ss_pred             HHHHH
Q 015768          378 RLRRG  382 (400)
Q Consensus       378 ~l~~~  382 (400)
                      +|+++
T Consensus       388 ~l~~~  392 (394)
T 2ay1_A          388 AIIEV  392 (394)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            99875

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=1.2e-39  Score=301.25  Aligned_cols=316  Identities=22%  Similarity=0.299  Sum_probs=257.3

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      +++++|+.+.+++++|+++++++.+.+.+.....|+. .+..++++++++++.+. .+++++|++|+|+++++..++.++
T Consensus        19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~-~~~~~~v~~~~G~~~al~~~~~~~   96 (335)
T 1uu1_A           19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD-FLSKNNVSVGNGADEIIYVMMLMF   96 (335)
T ss_dssp             CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS-SCCGGGEEEESSHHHHHHHHHHHS
T ss_pred             CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC-CCCHHHEEEcCChHHHHHHHHHHh
Confidence            4689999999988889999999999874333556743 46899999999998533 367899999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                         ||+|+++ |+|+++...++..|++++.+ |.+++ +.+|++.+     ++  +++|++++|+||||.++|.+++.+|
T Consensus        97 ---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l-----~~--~~~v~l~~p~nptG~~~~~~~l~~l  163 (335)
T 1uu1_A           97 ---DRSVFFP-PTYSCYRIFAKAVGAKFLEV-PLTKD-LRIPEVNV-----GE--GDVVFIPNPNNPTGHVFEREEIERI  163 (335)
T ss_dssp             ---SEEEECS-SSCHHHHHHHHHHTCEEEEC-CCCTT-SCCCCCCC-----CT--TEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             ---CCcEEEC-CCcHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHc-----CC--CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence               8999999 99999999999999999999 87644 45677665     33  4999999999999999998888777


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  269 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  269 (400)
                      +++|   | ++|+||+|+.+............+++++++|+||.+|++|+|+||++.+   +++++.+.....  +++++
T Consensus       164 ~~~~---~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~~~~  234 (335)
T 1uu1_A          164 LKTG---A-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS---EKFIDAYNRVRL--PFNVS  234 (335)
T ss_dssp             HHTT---C-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC---HHHHHHHHHHSC--TTCSC
T ss_pred             HHhC---C-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC---HHHHHHHHHhcC--CCCcC
Confidence            7766   7 8999999998764311111223567899999999999899999999997   788888877654  46889


Q ss_pred             HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe
Q 015768          270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI  349 (400)
Q Consensus       270 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~  349 (400)
                      .+.+.++..+|+. .++.++..++++++++++.+.|++++. .+.+ .+++|+|++++.  .+..++...|. ++||.+.
T Consensus       235 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~v~  308 (335)
T 1uu1_A          235 YVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RITD-SRGNFVFVFMEK--EEKERLLEHLR-TKNVAVR  308 (335)
T ss_dssp             HHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCC-CCSSEEEEECCT--HHHHHHHHHHH-HHTEEEE
T ss_pred             HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCc-EEcC-CCCeEEEEECCC--CCHHHHHHHHH-HCCEEEE
Confidence            9999999999986 467888889999999999999988753 5544 447889999875  24667888776 6899999


Q ss_pred             CCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768          350 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  382 (400)
Q Consensus       350 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  382 (400)
                      +     .++++|++++.  .+++++++++|+++
T Consensus       309 ~-----~~~~iRis~~~--~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          309 S-----FREGVRITIGK--REENDMILRELEVF  334 (335)
T ss_dssp             E-----ETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred             E-----CCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence            8     36799999974  67888888888753

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=1.1e-40  Score=314.33  Aligned_cols=327  Identities=20%  Similarity=0.179  Sum_probs=254.3

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhh--cC-CCCCCCCCCCCc-----HHHHHHHHHHHHhhcCC--CC-CcEEEeC
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELV--WD-PSISKYGADEGL-----PELRDALVKKLNQENKL--YK-SSVMVTA   96 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~--~~-~~~~~y~~~~g~-----~~~~~~~a~~l~~~~~~--~~-~~i~~~~   96 (400)
                      .++++|+|+.|.++++.|+.+.+++.+..  .. .....|++..|.     +++|+++++++.. +|+  .+ ++|++|+
T Consensus        20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~i~~t~   98 (391)
T 3bwn_A           20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VGNAATEDRYIVVGT   98 (391)
T ss_dssp             TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HCSBCCSSSEEEEEE
T ss_pred             CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEeC
Confidence            46789999999998876666666553333  21 135679888888     9999999999874 453  34 6999999


Q ss_pred             ChHHHHHHHHHHhcCCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768           97 GANQAFVNIVLTLCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN  172 (400)
Q Consensus        97 g~t~a~~~~~~~l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~  172 (400)
                      |+++++..++.++.++||    +|+++.|+|+++...++..|++++.+ +.+.+++.          .++  +++|++++
T Consensus        99 G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~----------~~~--~k~v~l~~  165 (391)
T 3bwn_A           99 GSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKW-EGDAWGFD----------KKG--PYIELVTS  165 (391)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEE-EEESTTCC----------CCS--CEEEEEES
T ss_pred             ChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEe-cCCHHHcC----------CCC--CEEEEECC
Confidence            999999999999999999    99999999999999999999998888 77655432          123  49999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEc-cCCcH
Q 015768          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY-PSEVE  251 (400)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~-~~~~~  251 (400)
                      ||||||.+++     +|++.++.+++++|+||+|..   ..........+++++++|+||.+|++|+|+||++. +   +
T Consensus       166 p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~---~  234 (391)
T 3bwn_A          166 PNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---PHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALVKD---K  234 (391)
T ss_dssp             SCTTTCCCCC-----CCC-----CCCEEEEECTTCS---TTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECC---H
T ss_pred             CCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---CCCCccccCCCCeEEEEechhhcCCCccceEEEEecC---H
Confidence            9999999997     344422223399999999983   11111111356889999999999999999999997 6   7


Q ss_pred             HHHHHHHHhhccCCcCccHHHHHHHHHHhcCC----------cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-----
Q 015768          252 GFATQLLKVQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----  316 (400)
Q Consensus       252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----  316 (400)
                      ++++.+........++++.+.|.++..+|+.+          .++++++++.++++++.+.+.|++++++.+..|     
T Consensus       235 ~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~  314 (391)
T 3bwn_A          235 EVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFC  314 (391)
T ss_dssp             HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEE
T ss_pred             HHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccc
Confidence            88888888776556788999999999999863          457888899999999999999998754444332     


Q ss_pred             --------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          317 --------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       317 --------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                              .+++|+|++++..    +. +.++++++||.+.||..|+. ++++|||++. +++++++++++|++++++
T Consensus       315 ~f~~~~~~~~g~~~~~~~~~~----~~-~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~~~~~~  386 (391)
T 3bwn_A          315 NYFGKSLESYPAFAWLGTKEE----TD-LVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLANMKLI  386 (391)
T ss_dssp             TTTTEEECCCCSEEEEEESSS----CC-HHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCcceEEEecCCcH----HH-HHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence                    3456899998741    23 33455689999999999975 7899999996 899999999999887654

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=1.9e-38  Score=300.27  Aligned_cols=336  Identities=13%  Similarity=0.105  Sum_probs=266.8

Q ss_pred             cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++++++|+.+++ ++++++.+++++.+.+.+.  ....|....|..++++++++++++.+|.  +++++|+|+++++..
T Consensus        41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~  118 (398)
T 3a2b_A           41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG  118 (398)
T ss_dssp             TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred             CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence            4677999999987 6667899999998887542  1334556677888999999999988885  689999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~nptG~~~~  182 (400)
                      ++.++.++||.|+++.|+|+++...++..|.+++.+ |.      +|++++++.++...  .+++|++++|+||||.+.+
T Consensus       119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v-~~------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~  191 (398)
T 3a2b_A          119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKY-GH------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN  191 (398)
T ss_dssp             HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC
T ss_pred             HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEe-CC------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC
Confidence            999999999999999999999999999999999988 65      47899999987521  3599999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc---C-CCc-EEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---E-GDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~-~~~-~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                         +++|.++|++||+++|+||+|+.+.++.......   . .++ +++++|+||++|++|   ||++.+   +++++.+
T Consensus       192 ---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~l  262 (398)
T 3a2b_A          192 ---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD---ADVIDFL  262 (398)
T ss_dssp             ---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC---HHHHHHH
T ss_pred             ---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC---HHHHHHH
Confidence               8999999999999999999998776542111111   1 123 799999999998667   999998   7888888


Q ss_pred             HHh-hccCCcCccHHHHH-HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768          258 LKV-QDNIPICASIISQH-LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       258 ~~~-~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (400)
                      ... ......+.+.+.+. ++..+|+. .++.++++++++++++++.+.|++++ +.+..+. ++++|+.++.. .+..+
T Consensus       263 ~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-g~~~~~~~~~~-~~~~~  338 (398)
T 3a2b_A          263 KHNARSVMFSASMTPASVASTLKALEI-IQNEPEHIEKLWKNTDYAKAQLLDHG-FDLGATE-SPILPIFIRSN-EKTFW  338 (398)
T ss_dssp             HHHCHHHHSSBCCCHHHHHHHHHHHHH-HHHCTHHHHHHHHHHHHHHHHHHHTT-CCBCSCC-SSEEEEECCCH-HHHHH
T ss_pred             HHhcccceecCCCCHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHhcC-CCcCCCC-CCEEEEEcCCH-HHHHH
Confidence            764 22222233344444 55577764 34456778889999999999999884 4666665 78999998742 24667


Q ss_pred             HHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +..+|. ++||.+.+|..|.   .++++|++++. ++++++++++++|+++++++
T Consensus       339 l~~~l~-~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~  392 (398)
T 3a2b_A          339 VTKMLQ-DDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA  392 (398)
T ss_dssp             HHHHHH-HTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHH-HCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            888886 5699999998775   35799999997 79999999999999998765

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=6.1e-38  Score=295.48  Aligned_cols=368  Identities=14%  Similarity=0.140  Sum_probs=270.5

Q ss_pred             hhHHHHhhhc---CchHHHHHHHHH-hcCCCeEEcCCCC---CCC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHH
Q 015768            5 AKLAKRALET---EMPIMVQIQELV-RGAKNAVSLAQGV---VYW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRD   75 (400)
Q Consensus         5 ~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~   75 (400)
                      |+.++|....   .......+.+.| ++..+.|||+.|.   ...  +..+.|.+|..+..+.+....|.+..|.+++|+
T Consensus        15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~   94 (420)
T 4h51_A           15 MTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFID   94 (420)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHH
T ss_pred             hhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHH
Confidence            5577776643   344444555544 5566799999993   222  234778888877777665667999999999999


Q ss_pred             HHHHHHHhhcCCCCCc--EEEeCChHHHHHHHHHHh----cCCCCEEEEeCCCccchhHHHHhcCcEEE-EeccCCCCCC
Q 015768           76 ALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNSYMSFQMTGVTHI-LVGPCSSKTL  148 (400)
Q Consensus        76 ~~a~~l~~~~~~~~~~--i~~~~g~t~a~~~~~~~l----~~~gd~vlv~~p~~~~~~~~~~~~g~~~~-~~~~~~~~~~  148 (400)
                      ++++++.... .+.+.  .+-|.|+|.|+..++..+    .+|||+|++++|+|+++..+++..|.+.+ .+...+++++
T Consensus        95 aia~~~~g~~-~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~  173 (420)
T 4h51_A           95 EAVKIIYGNT-VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV  173 (420)
T ss_dssp             HHHHHHHC----CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred             HHHHHhcCCC-ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence            9999875332 22233  344788888887776655    47999999999999999999999998743 3312334456


Q ss_pred             CCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-------ccC
Q 015768          149 HPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-------CVE  220 (400)
Q Consensus       149 ~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-------~~~  220 (400)
                      .+|.+.+.+.+... +..+++++.+||||||.+++.+++++|+++|+++++++|+|++|.+|.+++....       ...
T Consensus       174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~  253 (420)
T 4h51_A          174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR  253 (420)
T ss_dssp             EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred             CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence            67888888877622 2236666678999999999999999999999999999999999999988653221       123


Q ss_pred             CCcEEEEeccccccCCCcceeEEEEccCCcHHHH----HHHHHhhccCCcCccHHHHHHHHHHhcCCc------HHHHHH
Q 015768          221 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA----TQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTER  290 (400)
Q Consensus       221 ~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~  290 (400)
                      .+..+++.||||.++++|+|+||++.+....+..    ..+.........+++...+.++...+.+..      +.++.+
T Consensus       254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m  333 (420)
T 4h51_A          254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAM  333 (420)
T ss_dssp             TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             CceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            5678999999999999999999988765333322    233334445566788888888888887621      345677


Q ss_pred             HHHHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccC
Q 015768          291 VKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGL  367 (400)
Q Consensus       291 ~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~  367 (400)
                      ++++.++++.+.+.|++++.   +..+.+++|+|.|+.++     . +.++.| +++||++.+++        |||++..
T Consensus       334 ~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls-----~-e~v~~L-~e~~Vy~~~~g--------Ris~Agl  398 (420)
T 4h51_A          334 AERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS-----K-AQCEYC-QNHNIFITVSG--------RANMAGL  398 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC-----H-HHHHHH-HHTTEECCTTC--------EEEGGGC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC-----H-HHHHHH-HhCCEEEcCCC--------EEEeccC
Confidence            88899999999999998754   33445667999998774     2 345544 68999998864        9999988


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015768          368 VEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +++.++.++++|.++++++.+
T Consensus       399 ~~~ni~~~a~aI~~vvr~i~r  419 (420)
T 4h51_A          399 THETALMLAQTINDAVRNVNR  419 (420)
T ss_dssp             CHHHHHHHHHHHHHHHC----
T ss_pred             CHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999988654

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=6.2e-40  Score=312.36  Aligned_cols=327  Identities=17%  Similarity=0.126  Sum_probs=264.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhc-CCC-CCCCCCCC-C---cHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVW-DPS-ISKYGADE-G---LPELRDALVKKLNQENK--LYKSSVMVTAGANQA  101 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~-~~~-~~~y~~~~-g---~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a  101 (400)
                      ...|+|+.|++++++|+.+.+++.+.+. .+. ...|++.. |   ..++|+++++++.+.++  +++++|++|+|++++
T Consensus        56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a  135 (427)
T 2hox_A           56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL  135 (427)
T ss_dssp             TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred             CceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence            4689999999998878888888888774 321 23487777 8   89999999999987765  568999999999999


Q ss_pred             HHHHHHHh--------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768          102 FVNIVLTL--------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus       102 ~~~~~~~l--------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      +..++.++        .+|||+|+++.|+|+++...++..|++++.+        .+|++.|++.+++++  ++|++++|
T Consensus       136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~--k~v~l~~p  205 (427)
T 2hox_A          136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQ--YIEMVTSP  205 (427)
T ss_dssp             HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGG--EEEEEESS
T ss_pred             HHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCc--eEEEEcCC
Confidence            99999999        8999999999999999999999999887654        347778888776554  99999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  253 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~  253 (400)
                      |||||.+++ +.+       +  ++..+.|+++..   ..........+++++++|+||.+|++|+|+||++.++  +++
T Consensus       206 ~NPtG~~~~-~~l-------~--~~~~i~d~~~~~---~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--~~l  270 (427)
T 2hox_A          206 NNPEGLLRH-AVI-------K--GCKSIYDMVYYW---PHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKD--ESV  270 (427)
T ss_dssp             CTTTCCCCC-CSS-------T--TCEEEEECTTCS---TTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECC--HHH
T ss_pred             CCCcccccH-HHH-------c--CCCEEEeecccC---CCCCccccCCCceEEEEeChhcCCCCCceEEEEEECC--HHH
Confidence            999999999 422       2  567888887753   1111111225688999999999999999999999854  788


Q ss_pred             HHHHHHhhccCCcCccHHHHHHHHHHhcCC-----------cHHHHHHHHHHHHHHHHHHHHhccCCCCc----------
Q 015768          254 ATQLLKVQDNIPICASIISQHLALYSLQTG-----------PEWVTERVKDLVRNREIIREALSPLGEGA----------  312 (400)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~----------  312 (400)
                      ++++.........+++.+.|.++..+|+.+           .+++.+.++.++++++++.+.|++++++.          
T Consensus       271 ~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~  350 (427)
T 2hox_A          271 YNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYC  350 (427)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEE
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccccccccc
Confidence            899888776666788999999988888753           24556778889999999999999874323          


Q ss_pred             ----ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          313 ----VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       313 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                          +..|.+++|+|++++.   +..+++..+++++||.+.||..|+. ++++|||++. +++++++++++|++++++
T Consensus       351 ~~~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~~~~  424 (427)
T 2hox_A          351 NYFRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVKA  424 (427)
T ss_dssp             TTTTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHHTC
T ss_pred             ccccccCCCCceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence                2346679999999975   3456777777789999999998875 7899999996 899999999999988743

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=7.8e-37  Score=287.84  Aligned_cols=324  Identities=15%  Similarity=0.131  Sum_probs=259.3

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      +.++++++++.+.+.+    .|++  ...++++++++++++.+|++ ++++++|+|+++|+..++.++.++||+|+++.|
T Consensus        30 ~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~  103 (386)
T 2dr1_A           30 ACFPEVLEIMKVQMFS----HRSK--EYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTII  103 (386)
T ss_dssp             CCCHHHHHHTTSCCCC----TTSH--HHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred             CCcHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcC
Confidence            4578888887766542    3432  23678899999999988987 678999999999999999999999999999999


Q ss_pred             Cccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768          122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (400)
Q Consensus       122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (400)
                      +|++  +...++..|++++.+ |.+++ +.+|++++++.++....+++|++++|+||||.+.+   +++|.++|++||++
T Consensus       104 ~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~  178 (386)
T 2dr1_A          104 GAFGKRYKEVVESNGRKAVVL-EYEPG-KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKL  178 (386)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCE
T ss_pred             CchhHHHHHHHHHhCCceEEE-ecCCC-CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCe
Confidence            9998  788889999999999 88754 46899999999953223599999999999999999   89999999999999


Q ss_pred             EEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH----------------Hh--h
Q 015768          200 LVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL----------------KV--Q  261 (400)
Q Consensus       200 li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~----------------~~--~  261 (400)
                      +|+|++|+.+...   ......+.+++++|+||+++.+ .++||++.+   +++++.+.                ..  .
T Consensus       179 li~D~a~~~~~~~---~~~~~~~~di~~~s~sK~~~~~-~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (386)
T 2dr1_A          179 VFVDAVSAMGGAD---IKFDKWGLDVVFSSSQKAFGVP-PGLAIGAFS---ERFLEIAEKMPERGWYFDIPLYVKYLKEK  251 (386)
T ss_dssp             EEEECTTTBTTBC---CCTTTTTCSEEEEETTSTTCCC-SSCEEEEEC---HHHHHHHTTCTTCCSTTCHHHHHHHHHHH
T ss_pred             EEEEccccccCcc---ccccccCCcEEEEeccccccCC-CceEEEEEC---HHHHHHHhcCCCCceEEeHHHHHHhhccC
Confidence            9999999966542   1222345689999999999744 248999998   67776652                12  2


Q ss_pred             ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCCCCCCHHHH
Q 015768          262 DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  336 (400)
                      ...+++++.+.+.++..+++...+  .++++.++++++++++.+.|++++ +.+..+.   .+.++++.++.. .+..++
T Consensus       252 ~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  329 (386)
T 2dr1_A          252 ESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPG-IKGDEV  329 (386)
T ss_dssp             SSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTT-CCHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCC-CCHHHH
Confidence            234567888888888888875222  257788889999999999999884 4555553   367888888743 367888


Q ss_pred             HHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          337 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ..+|. ++||.+.+|..+..++++||+++. ++++++++++++|+++++++.
T Consensus       330 ~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  380 (386)
T 2dr1_A          330 YEAMR-KRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK  380 (386)
T ss_dssp             HHHHH-HTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            88887 569999999877667899999996 799999999999999998764

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=8.8e-37  Score=288.31  Aligned_cols=321  Identities=16%  Similarity=0.130  Sum_probs=257.4

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (400)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~  119 (400)
                      +.+.++++++++.+.+.+    .|++  ...++++++++++++.+|++++ ++++|+|+++|+..++.++.++||+|+++
T Consensus        42 ~~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~  115 (393)
T 1vjo_A           42 PSNAHPSVLQAMNVSPVG----HLDP--AFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG  115 (393)
T ss_dssp             CCCCCHHHHHHHSSCCCC----TTSH--HHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCCHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence            345678899888776643    3532  2567889999999999899888 99999999999999999999999999999


Q ss_pred             CCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768          120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (400)
Q Consensus       120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~  196 (400)
                      .|+|++  +...++..|++++.+ |.+++ +.+|++.+++.+++ ++  ++|++++|+||||.+.+   +++|.++|+++
T Consensus       116 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~  188 (393)
T 1vjo_A          116 VAGYFGNRLVDMAGRYGADVRTI-SKPWG-EVFSLEELRTALETHRP--AILALVHAETSTGARQP---LEGVGELCREF  188 (393)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred             cCChhHHHHHHHHHHcCCceEEE-ecCCC-CCCCHHHHHHHHhhCCc--eEEEEeccCCCcceecc---HHHHHHHHHHc
Confidence            999998  888889999999999 88764 46899999999986 55  89999999999999999   88999999999


Q ss_pred             CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh----h-----------
Q 015768          197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----Q-----------  261 (400)
Q Consensus       197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~----~-----------  261 (400)
                      |+++|+|++|+..   ..+......+.+++++|+||+++.++ |+||++.+   +++++.+...    .           
T Consensus       189 ~~~li~Dea~~~g---~~~~~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (393)
T 1vjo_A          189 GTLLLVDTVTSLG---GVPIFLDAWGVDLAYSCSQKGLGCSP-GASPFTMS---SRAIEKLQRRRTKVANWYLDMNLLGK  261 (393)
T ss_dssp             TCEEEEECTTTTT---TSCCCTTTTTCSEEECCSSSTTCSCS-SCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHH
T ss_pred             CCEEEEECCcccc---CcCCcccccCccEEEEcCcccccCCC-ceEEEEEC---HHHHHHHhccCCCCCceecCcHhhhh
Confidence            9999999999932   22222233466899999999998666 99999998   6777777432    0           


Q ss_pred             ----ccCCc-CccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCC
Q 015768          262 ----DNIPI-CASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLD  332 (400)
Q Consensus       262 ----~~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~  332 (400)
                          ....+ +++.+.+.++..+++... +++++..++++++++++.+.|++++ +.+..+.+   +.++++.++.. .+
T Consensus       262 ~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~  339 (393)
T 1vjo_A          262 YWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDG-VD  339 (393)
T ss_dssp             HHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTT-CC
T ss_pred             hhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCC-CC
Confidence                02233 678888888888887522 3467788899999999999999884 46665543   35778887643 36


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHH
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l  383 (400)
                      ..++...|.+++||.+.+|..|..++++||++ +. .+++++++++++|++++
T Consensus       340 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          340 GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            78888888754599999999887789999994 43 57778999999999876

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=5.1e-37  Score=292.37  Aligned_cols=351  Identities=17%  Similarity=0.169  Sum_probs=258.7

Q ss_pred             hHHHHHHHHHhcC------CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC------CCCCCC--CCCcHHHHHHHHHHHH
Q 015768           17 PIMVQIQELVRGA------KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGA--DEGLPELRDALVKKLN   82 (400)
Q Consensus        17 ~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~g~~~~~~~~a~~l~   82 (400)
                      ..+..+++.|...      +++++|+.+.++ +.|+.+++++.+.+.+..      ...|+.  ..+..++++.+++++ 
T Consensus         8 ~~~~~~r~~f~~~~~~~~g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-   85 (420)
T 1t3i_A            8 SLAATVRQDFPILNQEINGHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI-   85 (420)
T ss_dssp             CHHHHHGGGCGGGSCEETTEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHhCCccccccCCCceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc-
Confidence            3445555555433      348999999987 678999999988886421      122321  234455666666655 


Q ss_pred             hhcCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHH
Q 015768           83 QENKL-YKSSVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDAD  153 (400)
Q Consensus        83 ~~~~~-~~~~i~~~~g~t~a~~~~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e  153 (400)
                         +. +++++++|+|+|+|+..++.++    .++||+|+++.|+|++.    ...++..|++++.+ |.+++ +.+|++
T Consensus        86 ---~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~  160 (420)
T 1t3i_A           86 ---NARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV-QLDEQ-ESFDLE  160 (420)
T ss_dssp             ---TCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE-CBCTT-SSBCHH
T ss_pred             ---CCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEe-ccCCC-CCcCHH
Confidence               66 6789999999999999999999    89999999999999984    45667789999999 88644 568999


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA  233 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~  233 (400)
                      .+++.+++++  ++|++++|+||||.++|   +++|.++|++||+++|+|++|+.+...   ......+.+++++|+||.
T Consensus       161 ~l~~~l~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~~~~~~~~di~~~s~sK~  232 (420)
T 1t3i_A          161 HFKTLLSEKT--KLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---LDVQLIDCDWLVASGHKM  232 (420)
T ss_dssp             HHHHHCCTTE--EEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHHTCSEEEEEGGGT
T ss_pred             HHHHhhCCCc--eEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---CchhhcCCCEEEEehhhh
Confidence            9999998654  99999999999999999   899999999999999999999854321   111122467899999998


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhcc--------------------CCcCccHHHHHHHHH-HhcCCc-HHHHHHH
Q 015768          234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------------------IPICASIISQHLALY-SLQTGP-EWVTERV  291 (400)
Q Consensus       234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--------------------~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~  291 (400)
                      +|.+|  +||++.+   +++++++......                    +..+.+.+.+.++.. +++... .+++++.
T Consensus       233 ~~~~g--~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~  307 (420)
T 1t3i_A          233 CAPTG--IGFLYGK---EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIH  307 (420)
T ss_dssp             TSCTT--CEEEEEC---HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             cCCCc--eEEEEEc---hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHH
Confidence            87556  8999998   7887777654321                    112344455544333 444211 2356778


Q ss_pred             HHHHHHHHHHHHHhccCCCCcccCCC-----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------CCCC
Q 015768          292 KDLVRNREIIREALSPLGEGAVKGGE-----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRG  358 (400)
Q Consensus       292 ~~~~~~~~~l~~~L~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~  358 (400)
                      ++++++++++.+.|++++++.+..+.     .+.++++.++.  .+..++...| .++||.+.+|..|        +.++
T Consensus       308 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~g~~~  384 (420)
T 1t3i_A          308 NYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG--LHASDVATMV-DQDGIAIRSGHHCTQPLHRLFDASG  384 (420)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT--BCHHHHHHHH-HTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECC--CCHHHHHHHH-HHCCeEEeeccccchHHHHhcCCCC
Confidence            88899999999999988655665553     24455556763  3567788766 5889999998644        3378


Q ss_pred             eEEEEecc-CCHHHHHHHHHHHHHHHHHHhccC
Q 015768          359 HLRISFGG-LVEDDCKAAADRLRRGLEELVKDG  390 (400)
Q Consensus       359 ~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~  390 (400)
                      ++||+++. +++++++.++++|+++++.+.+..
T Consensus       385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~~~  417 (420)
T 1t3i_A          385 SARASLYFYNTKEEIDLFLQSLQATIRFFSDDD  417 (420)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHHHTC---
T ss_pred             eEEEecCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999997 799999999999999998876543

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=2e-36  Score=284.74  Aligned_cols=332  Identities=18%  Similarity=0.167  Sum_probs=246.1

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC-------CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISK-------YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-------y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      +.|+.+.+. ++|+++++++.+.+.+.....       |....+..++++.+++++    |++++++++|+|+++++..+
T Consensus         3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~a~~~~   77 (384)
T 1eg5_A            3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----GVSPSEIFFTSCATESINWI   77 (384)
T ss_dssp             EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----TSCGGGEEEESCHHHHHHHH
T ss_pred             EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEECCHHHHHHHH
Confidence            556666554 678999999999887521010       111223355566666555    78888999999999999999


Q ss_pred             HHHhc----CCCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768          106 VLTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (400)
Q Consensus       106 ~~~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG  178 (400)
                      +.++.    ++||+|+++.|+|+++...+   +..|++++.+ |.+++ +.+|++.+++.+++++  ++|++++|+||||
T Consensus        78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~nptG  153 (384)
T 1eg5_A           78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYV-PVDSR-GVVKLEELEKLVDEDT--FLVSIMAANNEVG  153 (384)
T ss_dssp             HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEEC-CBCTT-SCBCHHHHHHHCCTTE--EEEEEESBCTTTC
T ss_pred             HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEE-ccCCC-CccCHHHHHHHhCCCC--eEEEEECCCCCcc
Confidence            99998    79999999999999887655   6789999999 88754 5689999999997654  9999999999999


Q ss_pred             cCCCHHHHHHHHHHHHHcC--CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH--H
Q 015768          179 TYIPERLLKRISDLCKAAG--SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--A  254 (400)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~--~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~--~  254 (400)
                      .++|   +++|.++|++||  +++|+|++|+.   +..+......+.+++++|+||++|++|  +||+++++   ++  .
T Consensus       154 ~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~~~~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~---~~~~~  222 (384)
T 1eg5_A          154 TIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKIPFSLEKLEVDYASFSAHKFHGPKG--VGITYIRK---GVPIR  222 (384)
T ss_dssp             BBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTSCCCCTTTCCSEEEEEGGGGTSCTT--CEEEEECT---TSCCC
T ss_pred             cccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCcccCchhcCCCEEEecHHHhcCCCc--eEEEEEcC---CCccc
Confidence            9999   889999999999  99999999983   222222222357799999999998667  79999884   32  1


Q ss_pred             HHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCC
Q 015768          255 TQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPE  328 (400)
Q Consensus       255 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~  328 (400)
                      +.+...   ....+++++.+.+.++..+|+...+++++..++++++++++.+.|++.+ +.+..+.   .+.++++.++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~  301 (384)
T 1eg5_A          223 PLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFPN  301 (384)
T ss_dssp             CSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECTT
T ss_pred             cccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeCC
Confidence            111110   1123557788888888888875335577888899999999999998843 4554432   13466666663


Q ss_pred             CCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          329 KHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                        .+..++.+.|. ++||.+.+|..|..                   ++++||+++. ++++++++++++|+++++++.+
T Consensus       302 --~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  378 (384)
T 1eg5_A          302 --IRGSTLQNLLS-GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL  378 (384)
T ss_dssp             --CCHHHHHHHHH-HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred             --CCHHHHHHHHh-hCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence              36778888774 89999999886642                   3689999996 7999999999999999988754

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=1.3e-35  Score=283.18  Aligned_cols=343  Identities=16%  Similarity=0.082  Sum_probs=256.1

Q ss_pred             cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcC-C-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-P-SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+++++|+.+++ ++..++++++++.+.+.+ + ....|....|.....+++++.+++.+|.+  +.+++++|++++..
T Consensus        62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~  139 (427)
T 2w8t_A           62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLG  139 (427)
T ss_dssp             TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred             CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHH
Confidence            3567899999974 445789999999888765 2 12223334444344445555555555653  66777777889999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~nptG~~~~  182 (400)
                      ++.++.++||.|+++.|+|.++...++..|.+++.+ |.      .|+++|++.++...  .+++|++++++||+|.+.+
T Consensus       140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~  212 (427)
T 2w8t_A          140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF-RH------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP  212 (427)
T ss_dssp             HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred             HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEe-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence            999999999999999999999999999999999888 63      48999999987521  3599999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCC--CCc---cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~---~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                         +++|.++|++||+++|+||+|+.+.++.  ...   .....+.+++++|+||++|++|   ||++++   +++++.+
T Consensus       213 ---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~---~~l~~~l  283 (427)
T 2w8t_A          213 ---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSN---HPKFEAV  283 (427)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEEC---CTTGGGG
T ss_pred             ---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeC---HHHHHHH
Confidence               8999999999999999999999877652  111   1123456899999999998666   999988   5666655


Q ss_pred             HHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCCCCHH
Q 015768          258 LKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       258 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  334 (400)
                      ....  ...+.+.+++.+.++..+++.. +..++++++++++++++.+.|++++. .+. .+..+.++++.++.. .+..
T Consensus       284 ~~~~~~~~~~~~~~~~~~aa~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~-~~~~  360 (427)
T 2w8t_A          284 RLACRPYIFTASLPPSVVATATTSIRKL-MTAHEKRERLWSNARALHGGLKAMGF-RLGTETCDSAIVAVMLEDQ-EQAA  360 (427)
T ss_dssp             GGTCHHHHSSCCCCHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHHHHHHHHTC-EESCSSCCSSEEEEEESSH-HHHH
T ss_pred             HHhcccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-cccCCCCCCCEEEEEECCH-HHHH
Confidence            5431  1234566777777776777642 12467788899999999999988753 555 341467888888642 1356


Q ss_pred             HHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccCcc
Q 015768          335 EVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGMV  392 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~  392 (400)
                      ++...|. ++||.+.++..|..   .+++|++++. ++++++++++++|+++++++.+....
T Consensus       361 ~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~  421 (427)
T 2w8t_A          361 MMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVIGLE  421 (427)
T ss_dssp             HHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC---
T ss_pred             HHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCccccc
Confidence            7888776 67999999887653   3689999997 79999999999999999987665443

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=5.5e-36  Score=283.33  Aligned_cols=337  Identities=14%  Similarity=0.072  Sum_probs=249.8

Q ss_pred             CCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           29 AKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        29 ~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++++++|+.+++ ++..++++.+++.+.+.+...  ..+....|.....+++++.+++.+|.+ + .++++++++++..+
T Consensus        42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~-~i~~~sGt~a~~~~  119 (399)
T 3tqx_A           42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-D-TILYSSCFDANGGL  119 (399)
T ss_dssp             TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-E-EEEESCHHHHHHTT
T ss_pred             CeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-c-EEEECchHHHHHHH
Confidence            467899999953 234689999999888764211  011112333333444444444444653 4 55555668899999


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCC
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~  181 (400)
                      +.++.++||.|+++.|+|+++...++..|.+++.+ |.      .|++++++.++..    ..+++|++++|+||||.++
T Consensus       120 l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~  192 (399)
T 3tqx_A          120 FETLLGPEDAIISDELNHASIIDGIRLCKAQRYRY-KN------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIA  192 (399)
T ss_dssp             HHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEE-CT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEEC
T ss_pred             HHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEe-CC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcC
Confidence            99999999999999999999999999999999988 65      3667888888741    1359999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--c---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--C---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      |   +++|.++|++||+++|+||+|+.+..+....  .   ....+.+++++|+||+++  |++.||++.+   +++++.
T Consensus       193 ~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~---~~~~~~  264 (399)
T 3tqx_A          193 D---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH---KEIIEW  264 (399)
T ss_dssp             C---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC---HHHHHH
T ss_pred             C---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC---HHHHHH
Confidence            9   8999999999999999999997433322111  1   112356799999999997  4455999998   788888


Q ss_pred             HHHhhc--cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768          257 LLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       257 l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      +.....  ..+.+.+.+.+.++..+++...++..+.+++++++++++.+.|++++. .+..+. +.++|+.++... +..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~~-~~~  341 (399)
T 3tqx_A          265 LRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLGF-QLVPGN-HPIIPVMLGDAQ-LAT  341 (399)
T ss_dssp             HHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCS-SSEEEEEEECHH-HHH
T ss_pred             HHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCHH-HHH
Confidence            876432  234467788888888888752255688889999999999999998854 555555 677888886432 467


Q ss_pred             HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++...|. ++||.+.++..+.   .++++|++++. .+++++++++++|+++++++
T Consensus       342 ~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          342 NMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             HHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence            8888886 6899999876543   34699999985 79999999999999999864

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=1.3e-35  Score=275.90  Aligned_cols=322  Identities=14%  Similarity=0.042  Sum_probs=240.7

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA  120 (400)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~  120 (400)
                      +.++|+++++++.+.+...  ..+.......++++.++++    +|++++++++|+|+++++..++.++.++||+|+++.
T Consensus         9 p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~----~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~   82 (352)
T 1iug_A            9 PVRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREA----FRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPV   82 (352)
T ss_dssp             SCCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHH----HTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHH----hCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEe
Confidence            3467899999998876531  1111112234455555554    478788999999999999999999999999999999


Q ss_pred             CCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--
Q 015768          121 PYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--  196 (400)
Q Consensus       121 p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~--  196 (400)
                      |+|+++.  ..++..|++++.+ |.++++ .+|++++++   ++  +++|++++|+||||.+.+   +++|.++|++|  
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~---~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  152 (352)
T 1iug_A           83 YGKFSERFYEIALEAGLVVERL-DYPYGD-TPRPEDVAK---EG--YAGLLLVHSETSTGALAD---LPALARAFKEKNP  152 (352)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCTTTSCC---SS--CSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred             CCchhHHHHHHHHHcCCceEEE-eCCCCC-CCCHHHHhc---cC--CcEEEEEEecCCcceecC---HHHHHHHHHhhCC
Confidence            9998865  4556689999999 887554 578887766   33  489999999999999999   88999999999  


Q ss_pred             CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH---------HH----Hh-hc
Q 015768          197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ---------LL----KV-QD  262 (400)
Q Consensus       197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~---------l~----~~-~~  262 (400)
                      |+++|+|++|+...   .+......+.+++++|+||+++ ++.++||++.+   ++++++         +.    .. ..
T Consensus       153 ~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T 1iug_A          153 EGLVGADMVTSLLV---GEVALEAMGVDAAASGSQKGLM-CPPGLGFVALS---PRALERLKPRGYYLDLARELKAQKEG  225 (352)
T ss_dssp             TCEEEEECTTTBTT---BCCCSGGGTCSEEEEESSSTTC-CCSCEEEEEEC---HHHHHTCCCCSSTTCHHHHHHHHTTT
T ss_pred             CCEEEEECCccccC---cceeccccCeeEEEecCccccc-CCCceeEEEEC---HHHHHHhhCCCceeeHHHHHhhcccC
Confidence            99999999997422   2211122246788999999664 23357999988   565543         21    11 12


Q ss_pred             cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-CceEEEeeCCCCCCCHHHHHHHHH
Q 015768          263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      ...++++...+.++..+++...+++++..++++++++++.+.|+++ ++.+..+. .++++++.++.. .+..++.++|.
T Consensus       226 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~  303 (352)
T 1iug_A          226 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEG-VPYARVKEAFA  303 (352)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTT-CCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCC-CCHHHHHHHHH
Confidence            2345677777777777776433336788889999999999999987 44666553 577888888743 36788888886


Q ss_pred             HhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          342 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       ++||.+.+|..+..++++||+++. ++++++++++++|+++++++.+
T Consensus       304 -~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  350 (352)
T 1iug_A          304 -QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEILP  350 (352)
T ss_dssp             -TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC-
T ss_pred             -HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhcC
Confidence             679999998865567899999997 6899999999999999987643

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=1.8e-35  Score=279.22  Aligned_cols=336  Identities=16%  Similarity=0.125  Sum_probs=247.9

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      +.+.|+.+. +.++|+.+++++.+.+...    ++  .......+.+.+.+++.+|++++++++|+|+|+++..++.++.
T Consensus         8 ~~~yl~~~~-~~~~~~~v~~a~~~~~~~~----~~--~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~   80 (392)
T 2z9v_A            8 DPVITLTAG-PVNAYPEVLRGLGRTVLYD----YD--PAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLI   80 (392)
T ss_dssp             CCSEECSSS-CCCCCHHHHHHTTSCCCCT----TS--HHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHC
T ss_pred             CcceeecCC-CcCCCHHHHHHHhcccccc----cc--HHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhc
Confidence            344555543 3467889999888776541    11  1122333444444555558878999999999999999999999


Q ss_pred             CCCCEEEEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          111 DAGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       111 ~~gd~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      ++||+|+++.|+|+++.  ..++..|++++.+ |.++++ .+|++.+++.++....+++|++++|+||||.++|   +++
T Consensus        81 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~  155 (392)
T 2z9v_A           81 SPDDVVLNLASGVYGKGFGYWAKRYSPHLLEI-EVPYNE-AIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDA  155 (392)
T ss_dssp             CTTCCEEEEESSHHHHHHHHHHHHHCSCEEEE-ECCTTS-CCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHH
T ss_pred             CCCCEEEEecCCcccHHHHHHHHHcCCceEEe-eCCCCC-CCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHH
Confidence            99999999999998753  4456679999999 887664 6899999999953223589999999999999999   889


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------  261 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------  261 (400)
                      |.++|++||+++|+|++|+....   +......+.+++++|+||+++ ++.++||++.+   +++++++....       
T Consensus       156 i~~l~~~~~~~li~D~a~~~g~~---~~~~~~~~~d~~~~s~sK~~~-~~~g~G~l~~~---~~~~~~l~~~~~g~~~~~  228 (392)
T 2z9v_A          156 IGALVSAHGAYLIVDAVSSFGGM---KTHPEDCKADIYVTGPNKCLG-APPGLTMMGVS---ERAWAKMKANPLAPRASM  228 (392)
T ss_dssp             HHHHHHHTTCEEEEECTTTBTTB---SCCGGGGTCSEEEECSSSTTC-CCSCCEEEEEC---HHHHHHHHTCTTSCCSST
T ss_pred             HHHHHHHcCCeEEEEcccccCCc---ccccccccceEEEecCccccc-CCCceeEEEEC---HHHHHHhhhccCCCCcee
Confidence            99999999999999999984321   111222346789999999764 23345999998   77877776421       


Q ss_pred             -------------ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEE
Q 015768          262 -------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLW  323 (400)
Q Consensus       262 -------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~  323 (400)
                                   .....+++...+.++..+++...++ +++..++++++++++.+.|++++ +.+..|.    .+.+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~  307 (392)
T 2z9v_A          229 LSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTA  307 (392)
T ss_dssp             TCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEE
T ss_pred             ccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEE
Confidence                         1123445666666666666542333 57788889999999999998874 4555422    467788


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-c-cCCHHHHHHHHHHHHHHHHHHh
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-G-GLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +.++.. .+..++..+|.+++||.+.+|..+..++++|+++ + .++++++++++++|+++++++.
T Consensus       308 ~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~  372 (392)
T 2z9v_A          308 VRTPDG-VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG  372 (392)
T ss_dssp             EECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCCC-CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence            888643 3678888888744599999998776789999994 6 4799999999999999998764

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=6.6e-35  Score=276.47  Aligned_cols=334  Identities=15%  Similarity=0.160  Sum_probs=250.0

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC--CCCC------CCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISKY------GADEGLPELRDALVKKLNQENKL-YKSSVMVTAGAN   99 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y------~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t   99 (400)
                      |++++.|+.+.++ +.|+++++++.+.+.+..  ...+      .+..+..++++.+++++    +. +++++++|+|+|
T Consensus        21 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t   95 (406)
T 1kmj_A           21 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI----NARSAEELVFVRGTT   95 (406)
T ss_dssp             TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT----TCSCGGGEEEESSHH
T ss_pred             CCceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc----CCCCCCeEEEeCChh
Confidence            3468999999877 578899999988886531  1111      12233445555555554    76 578999999999


Q ss_pred             HHHHHHHHHh----cCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe
Q 015768          100 QAFVNIVLTL----CDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (400)
Q Consensus       100 ~a~~~~~~~l----~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~  171 (400)
                      +|+..++.++    .++||+|+++.|+|++...    .++..|++++.+ |.+++ +.+|++.+++.+++++  ++|+++
T Consensus        96 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~~--~~v~~~  171 (406)
T 1kmj_A           96 EGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI-PLNPD-GTLQLETLPTLFDEKT--RLLAIT  171 (406)
T ss_dssp             HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE-CBCTT-SCBCGGGHHHHCCTTE--EEEEEE
T ss_pred             HHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE-ecCCC-CCcCHHHHHHHhccCC--eEEEEe
Confidence            9999999999    8999999999999987653    356789999999 87754 4689999999997654  999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  251 (400)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~  251 (400)
                      +|+||||.++|   +++|.++|++||+++|+|++|+.+..   +......+.+++++|+||.+|++|  +||++.+   +
T Consensus       172 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~---~~~~~~~~~d~~~~s~~K~~g~~G--~G~~~~~---~  240 (406)
T 1kmj_A          172 HVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH---PVDVQALDCDFYVFSGHKLYGPTG--IGILYVK---E  240 (406)
T ss_dssp             SBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHHHTCSEEEEEGGGTTSCTT--CEEEEEC---H
T ss_pred             CCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC---CCcccccCCCEEEEEchhccCCCC--cEEEEEe---H
Confidence            99999999999   89999999999999999999986432   111112356789999999998666  7999998   7


Q ss_pred             HHHHHHHHhhcc---------------------CCcCccHHHHHHHH-HHhcCCc-HHHHHHHHHHHHHHHHHHHHhccC
Q 015768          252 GFATQLLKVQDN---------------------IPICASIISQHLAL-YSLQTGP-EWVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       252 ~~~~~l~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      ++++++......                     ...+.+.+.+.++. .+++... .++++..++++++++++.+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  320 (406)
T 1kmj_A          241 ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV  320 (406)
T ss_dssp             HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC
Confidence            888776543311                     11223444444433 4554311 245677888889999999999998


Q ss_pred             CCCcccCC--CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------CCCCeEEEEecc-CCHHHHHHHHH
Q 015768          309 GEGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAAD  377 (400)
Q Consensus       309 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~  377 (400)
                      +++.+..+  .+++ +++.++.  .+..++...| .++||.+.+|..|        +.++++||+++. +++++++.+++
T Consensus       321 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~  396 (406)
T 1kmj_A          321 PDLTLYGPQNRLGV-IAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVT  396 (406)
T ss_dssp             TTEEEESCTTCCSE-EEEEETT--CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHH
T ss_pred             CCeEEecCCCcCCE-EEEEECC--CCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHH
Confidence            66566666  5444 4446653  3577788766 5889999998753        346899999997 69999999999


Q ss_pred             HHHHHHHHH
Q 015768          378 RLRRGLEEL  386 (400)
Q Consensus       378 ~l~~~l~~~  386 (400)
                      .|+++++.+
T Consensus       397 ~l~~~~~~l  405 (406)
T 1kmj_A          397 GLQRIHRLL  405 (406)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            999988754

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=1.4e-35  Score=279.14  Aligned_cols=329  Identities=12%  Similarity=0.066  Sum_probs=250.9

Q ss_pred             cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcC-CC---CCCC--CCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-PS---ISKY--GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      +++++++|+.+.+ ++++++++++++.+.+.+ +.   ...|  +...+..++++.+++++    |++  +.++++++++
T Consensus        37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~  110 (384)
T 1bs0_A           37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----GYS--RALLFISGFA  110 (384)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----CCC--cEEEeCCcHH
Confidence            4677999999874 556789999999888764 21   1123  33345566777777776    664  4566666689


Q ss_pred             HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCcc
Q 015768          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGT  179 (400)
Q Consensus       101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~  179 (400)
                      ++..++.++.++||.|+++.|+|..+...++..|.+++.+ |.      .|++++++.+++.. ..+++++++|+||||.
T Consensus       111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~  183 (384)
T 1bs0_A          111 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRF-AH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGD  183 (384)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEE-CT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCC
T ss_pred             HHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEe-CC------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCC
Confidence            9999999999999999999999999999999999999988 63      37899999887532 2488888899999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      +++   +++|.++|++||+++|+||+|+.+.++  +... .....+.+++++|+||++|++|   ||++.+   +++++.
T Consensus       184 ~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~  254 (384)
T 1bs0_A          184 SAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCS---STVADY  254 (384)
T ss_dssp             BCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEEC---HHHHHH
T ss_pred             ccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC---cEEEeC---HHHHHH
Confidence            999   889999999999999999999876543  1111 1111234589999999998656   999998   788887


Q ss_pred             HHHhh--ccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          257 LLKVQ--DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       257 l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      +....  ...+.+++++.+.++..+++...+ +.++..++++++++++.+.|++++. .+.+ ..++++|+.++.. .+.
T Consensus       255 l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~~~~~~~~~~~~-~~~  331 (384)
T 1bs0_A          255 LLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLAD-SCSAIQPLIVGDN-SRA  331 (384)
T ss_dssp             HHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECS-CCSSBCCEEEESH-HHH
T ss_pred             HHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCC-cccC-CCCCEEEEEeCCH-HHH
Confidence            76542  222346788888888877775222 5678888999999999999999864 5554 3467777887632 246


Q ss_pred             HHHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      .++..+|. ++||.+.++..++.   .+++||+++. ++++++++++++|+++
T Consensus       332 ~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          332 LQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             HHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            67888876 67999999887642   4789999986 6899999999999864

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=6.6e-35  Score=275.45  Aligned_cols=320  Identities=13%  Similarity=0.028  Sum_probs=249.4

Q ss_pred             CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC---------
Q 015768           42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA---------  112 (400)
Q Consensus        42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~---------  112 (400)
                      .++++++++++.+.+.+.. ..+....+..++++++++++++.+|.+++++++|+|+++|+..++.++..+         
T Consensus        40 ~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~  118 (397)
T 3f9t_A           40 SNVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGL  118 (397)
T ss_dssp             CCCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcc
Confidence            3567899999999887642 222222255788888999999999999999999999999999999999766         


Q ss_pred             ----CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          113 ----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       113 ----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                          ||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++.+++ ++  ++|++++|+||||.+.+   ++
T Consensus       119 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~  191 (397)
T 3f9t_A          119 SKNEHPKIIVPITAHFSFEKGREMMDLEYIYA-PIKED-YTIDEKFVKDAVEDYDV--DGIIGIAGTTELGTIDN---IE  191 (397)
T ss_dssp             CCCSSCEEEEETTCCTHHHHHHHHHTCEEEEE-CBCTT-SSBCHHHHHHHHHHSCC--CEEEEEBSCTTTCCBCC---HH
T ss_pred             cCCCCeEEEECCcchhHHHHHHHHcCceeEEE-eeCCC-CcCCHHHHHHHHhhcCC--eEEEEECCCCCCCCCCC---HH
Confidence                9999999999999999999999999999 88765 57899999999987 55  99999999999999999   88


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCC-----------CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGR-----------KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~-----------~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      +|.++|++||+++|+|++|+.+..+..           +..... +.++++.|++|+++ +|.++|+++.++  +.+.+.
T Consensus       192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~--~~~~~~  267 (397)
T 3f9t_A          192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKD--IGYKRY  267 (397)
T ss_dssp             HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESS--GGGGGG
T ss_pred             HHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeC--HHHHHh
Confidence            999999999999999999987654211           111222 56788999999885 678999988875  444444


Q ss_pred             HHHhhcc-----------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee
Q 015768          257 LLKVQDN-----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR  325 (400)
Q Consensus       257 l~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  325 (400)
                      +......           .....+.+.+.++...+.  ..++.+..+++.++++++.+.|++++. .+..+..+.++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~  344 (397)
T 3f9t_A          268 LDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG--REGQRKIVNECMENTLYLYKKLKENNF-KPVIEPILNIVAIE  344 (397)
T ss_dssp             TCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCCSSSEEEEE
T ss_pred             hccCCccccCCCccccccccccchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEEcCCCccEEEEE
Confidence            3221111           111235566666666664  355678888889999999999998844 54444447777888


Q ss_pred             CCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       326 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      ++.    ..++...|. ++||.+.++.   .++++||+++. ++++++++++++|+++++
T Consensus       345 ~~~----~~~~~~~l~-~~gi~v~~~~---~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          345 DED----YKEVCKKLR-DRGIYVSVCN---CVKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             CTT----HHHHHHHHH-HTTCBCEECS---SSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             eCC----HHHHHHHHH-hCCeEEeccC---CCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            763    677888776 6799999876   36899999986 799999999999998764

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=1.1e-34  Score=274.00  Aligned_cols=332  Identities=10%  Similarity=0.060  Sum_probs=249.1

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhc
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~  110 (400)
                      .+.+..|  ++++|+++++++.+.+...    |.+  ......+++.+.+++.+|++++ ++++|+|+|+|+..++.++.
T Consensus        20 ~~~~~~g--~~~~~~~v~~a~~~~~~~~----~~~--~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~   91 (393)
T 2huf_A           20 KLLMGPG--PSNAPQRVLDAMSRPILGH----LHP--ETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLL   91 (393)
T ss_dssp             CEECSSS--CCCCCHHHHHHTTSCCCCT----TSH--HHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC
T ss_pred             eEEecCC--CCCCCHHHHHHHHhhhccC----CCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHh
Confidence            3445444  4567899999887766531    311  1233444555555555588775 89999999999999999999


Q ss_pred             CCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          111 DAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       111 ~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      ++||+|+++.|+|++.  ...++..|++++.+ |.+++ +.+|++.+++.+++ ++  ++|++++|+||||.++|   ++
T Consensus        92 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~  164 (393)
T 2huf_A           92 EDGDVILIGHTGHWGDRSADMATRYGADVRVV-KSKVG-QSLSLDEIRDALLIHKP--SVLFLTQGDSSTGVLQG---LE  164 (393)
T ss_dssp             CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CT
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHcCCeeEEE-eCCCC-CCCCHHHHHHHHhccCC--cEEEEEccCCCccccCC---HH
Confidence            9999999999999884  34456689999999 88765 46899999999986 55  99999999999999999   88


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHHhh----c
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ----D  262 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~~~----~  262 (400)
                      +|.++|++||+++|+|++++...   .+......+.+++++|+||++ |++|+  ||++.+   +++++.+....    .
T Consensus       165 ~i~~~~~~~~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~---~~~~~~~~~~~~~~~~  236 (393)
T 2huf_A          165 GVGALCHQHNCLLIVDTVASLGG---APMFMDRWEIDAMYTGSQKVLGAPPGI--TPVSFS---HRAVERYKRRNTKVKV  236 (393)
T ss_dssp             THHHHHHHTTCEEEEECTTTBTT---BCCCTTTTTCSEEECCSSSTTCCCSSC--EEEEEC---HHHHHHHHTCSSCCSC
T ss_pred             HHHHHHHHcCCEEEEEcccccCC---CCcchhhcCccEEEECCCcccccCCCe--EEEEEC---HHHHHHHhhcCCCCce
Confidence            99999999999999999987432   222222335779999999985 45565  999988   78888876541    0


Q ss_pred             -------------------cCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---Cc
Q 015768          263 -------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GA  319 (400)
Q Consensus       263 -------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~  319 (400)
                                         ....+++...+.++..+++...+ .+++..++++++++++.+.|++++ +.+..+.   .+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~  315 (393)
T 2huf_A          237 YYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAG-FELYADPKDRLS  315 (393)
T ss_dssp             GGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCT
T ss_pred             EEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCccccCC
Confidence                               01124566666666666664222 267788888999999999998884 4555442   34


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .+++++++.. .+..++..+|.+++||.+.+|..+..++++||++ +. ++++++++++++|+++++++..
T Consensus       316 ~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~  385 (393)
T 2huf_A          316 TVTTIKVPQG-VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP  385 (393)
T ss_dssp             TEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred             cEEEEEcCCC-CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence            5778888643 3678888888756799999998877789999999 54 4789999999999999988754

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=100.00  E-value=3.6e-35  Score=273.68  Aligned_cols=333  Identities=13%  Similarity=0.073  Sum_probs=249.2

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      .+++++|+.+.+. ++++.+++++.+.+.+     |....+..++++++++++++.+|.+++++++|+|+++++..++.+
T Consensus        12 ~p~~i~l~~~~~~-~~~~~v~~a~~~~~~~-----~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~   85 (359)
T 1svv_A           12 KPKPYSFVNDYSV-GMHPKILDLMARDNMT-----QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSL   85 (359)
T ss_dssp             ---CEECSCSCSS-CCCHHHHHHHHHHTTC-----CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHH
T ss_pred             CCeeEEecCCCcC-CCCHHHHHHHHHHHhh-----ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHH
Confidence            3568999997666 7789999999998753     545567788999999999999898889999999999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhH--HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-----CCeEEEEeCCCCCCccCC
Q 015768          109 LCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-----TPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-----~~~~v~l~~p~nptG~~~  181 (400)
                      +.++||+|+++.|+|+++..  .++..|++++.+ |.+  ++.+|++++++.++++.     .+++|++++| ||||.++
T Consensus        86 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~  161 (359)
T 1svv_A           86 ALRPWEAVIATQLGHISTHETGAIEATGHKVVTA-PCP--DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY  161 (359)
T ss_dssp             HCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEE-CCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC
T ss_pred             HhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEE-eCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec
Confidence            99999999999999999887  478899999999 875  45789999999987541     2589999998 7999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC----CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      |.+++++|.++|++||+++|+|++|..+..+..+.....    ...++++.|++|..+  ..+.|+++.+   +++++.+
T Consensus       162 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~---~~~~~~~  236 (359)
T 1svv_A          162 TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILN---DALKPNA  236 (359)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECS---GGGCTTH
T ss_pred             CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEc---ccHHHHH
Confidence            999999999999999999999999965543322211110    234578889999743  3567999987   5665555


Q ss_pred             HHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768          258 LKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       258 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (400)
                      ....  ....+..+......+..+++.  +..++..+++.++++++.+.| +.+++.+..+.+++++|++++      .+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------~~  307 (359)
T 1svv_A          237 RHLIKQRGALMAKGWLLGIQFEVLMKD--NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE------NT  307 (359)
T ss_dssp             HHHHHHTTCCCTTTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE------HH
T ss_pred             HHHHhcCCcccccchhhHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC------HH
Confidence            5432  212222222233333445654  345778888999999999999 555557776777888888775      47


Q ss_pred             HHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.++|.+++||.+.+. ....++++|++++. .+++++++++++|+++++++
T Consensus       308 ~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          308 MIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST  358 (359)
T ss_dssp             HHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence            7887764449998321 11246799999876 79999999999999987653

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=2.1e-35  Score=281.55  Aligned_cols=342  Identities=15%  Similarity=0.104  Sum_probs=254.0

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhc--CCCCC----CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--DPSIS----KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      ..+++.+.|+.+.+. ++|+++++++.+.+.  +....    .|....+..+..+++.+++++.++++++++++|+|+++
T Consensus        18 ~~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~   96 (423)
T 3lvm_A           18 RAMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATE   96 (423)
T ss_dssp             --CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHH
T ss_pred             cccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHH
Confidence            556888999887665 678999999998877  32110    11111122345566666666666888899999999999


Q ss_pred             HHHHHHHHhcC----CCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768          101 AFVNIVLTLCD----AGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus       101 a~~~~~~~l~~----~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      |+..++.++.+    +||+|+++.++|+++...+   +..|++++.+ |.+++ +.+|++.+++.+++++  ++|++++|
T Consensus        97 a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~  172 (423)
T 3lvm_A           97 SDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-APQRN-GIIDLKELEAAMRDDT--ILVSIMHV  172 (423)
T ss_dssp             HHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEE-CCCTT-SCCCHHHHHHHCCTTE--EEEECCSB
T ss_pred             HHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEe-ccCCC-CccCHHHHHHhcCCCc--EEEEEeCC
Confidence            99999998874    7999999999999988776   4459999999 88764 4689999999998755  99999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  253 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~  253 (400)
                      +||||.++|   +++|.++|++||+++|+|++|+....   +......+.+++++|+||.+|.+|  +|+++.++   +.
T Consensus       173 ~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~---~~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~  241 (423)
T 3lvm_A          173 NNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL---PIDLSQLKVDLMSFSGHKIYGPKG--IGALYVRR---KP  241 (423)
T ss_dssp             CTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS---CCCTTTSCCSEEEEESTTTTSCSS--CEEEEECB---TT
T ss_pred             CCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC---CcChhhcCCCEEEechHHhcCCCC--eEEEEEec---cc
Confidence            999999999   88899999999999999999875322   222223456799999999887555  89988883   33


Q ss_pred             HHHHHHhhc-------cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEE
Q 015768          254 ATQLLKVQD-------NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLW  323 (400)
Q Consensus       254 ~~~l~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~  323 (400)
                      .+.+.....       ....+.+...+.++..+++...+++++..++++++++++.+.|++++++.+..+..   +.+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  321 (423)
T 3lvm_A          242 RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILN  321 (423)
T ss_dssp             BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEE
T ss_pred             cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEE
Confidence            333332211       22345677777777677764334568888999999999999999886656655442   24555


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +.++.  .+..++...|. +  |.+.+|..|..                   ++++||+++. ++++++++++++|++++
T Consensus       322 ~~~~~--~~~~~l~~~l~-~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~  396 (423)
T 3lvm_A          322 VSFNY--VEGESLIMALK-D--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI  396 (423)
T ss_dssp             EEETT--SCHHHHHHHTT-T--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEeCC--CCHHHHHHHHh-h--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            55543  35777887664 4  99999876643                   4899999997 78999999999999999


Q ss_pred             HHHhcc
Q 015768          384 EELVKD  389 (400)
Q Consensus       384 ~~~~~~  389 (400)
                      +++.+.
T Consensus       397 ~~~~~~  402 (423)
T 3lvm_A          397 GRLRDL  402 (423)
T ss_dssp             HHHHTS
T ss_pred             HHhhcc
Confidence            988654

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=100.00  E-value=8.5e-37  Score=286.11  Aligned_cols=330  Identities=16%  Similarity=0.099  Sum_probs=247.5

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC--------CCCCCCCCCcHHHHHH-HHHHHHhhcCCCCCcEEEeCChH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--------ISKYGADEGLPELRDA-LVKKLNQENKLYKSSVMVTAGAN   99 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~~~~~-~a~~l~~~~~~~~~~i~~~~g~t   99 (400)
                      +++++.|+.+.+..++++++++++.+.+....        ...|.+..+..++++. +++++    |.+  ++++++|+|
T Consensus         6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~----~~~--~v~~~~g~t   79 (371)
T 2e7j_A            6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL----GCD--VARVTNGAR   79 (371)
T ss_dssp             --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT----TSS--EEEEESSHH
T ss_pred             CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc----CCC--EEEEeCChH
Confidence            56789999977677788999999999886531        1234456777888888 88876    554  999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEecc--CCCCCCCCCHHHHHHhhccC---CCCeEEEEeCCC
Q 015768          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP--CSSKTLHPDADWLEKTLETK---PTPKLVSVVNPG  174 (400)
Q Consensus       100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~e~l~~~l~~~---~~~~~v~l~~p~  174 (400)
                      +|+..++.++.++||+|+++.|+|+++...++..|++++.+ |  .+++ +.+|++++++.++..   ..+++|++++|+
T Consensus        80 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~  157 (371)
T 2e7j_A           80 EAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALV-PKTDYPD-YAITPENFAQTIEETKKRGEVVLALITYPD  157 (371)
T ss_dssp             HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEE-CCCCTTT-CCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred             HHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEe-ecccCCC-CCcCHHHHHHHHHhhcccCCeEEEEEECCC
Confidence            99999999999999999999999999999999999999999 7  6544 578999999999721   235999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      ||||.+++   +++|.++|++||+++|+|++|+.+...   ......+.+++++|+||+++ ++.|+||++.+   ++++
T Consensus       158 nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~~di~~~s~sK~~~-~~~~~G~~~~~---~~~~  227 (371)
T 2e7j_A          158 GNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP---VSLKEIGADFIVGSGHKSMA-ASGPIGVMGMK---EEWA  227 (371)
T ss_dssp             TTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC---CCHHHHTCSEEEEEHHHHSS-CCSSCEEEEEC---TTTT
T ss_pred             CCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC---CChhhcCCCEEEecCCcCCC-CCCCcEEEEEe---chhh
Confidence            99999999   799999999999999999999976532   11112245699999999997 45599999998   4555


Q ss_pred             HH-HHHhhc--cC-----CcCccHHHHHHHHHHhcCCcHHHHHHHHHH--HHHHHHHHHHhccCCCCcccCCC--CceEE
Q 015768          255 TQ-LLKVQD--NI-----PICASIISQHLALYSLQTGPEWVTERVKDL--VRNREIIREALSPLGEGAVKGGE--GAIYL  322 (400)
Q Consensus       255 ~~-l~~~~~--~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~~~~--~~~~~  322 (400)
                      ++ +.....  ..     ..+++.....++..+++...+   +..+++  +++++++.+.|+++ ++.+..+.  .+.++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~  303 (371)
T 2e7j_A          228 EIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLM  303 (371)
T ss_dssp             TTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEE
T ss_pred             hhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceE
Confidence            55 544332  11     345566666666666653111   556667  78889999999887 44655543  36688


Q ss_pred             EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC------CCeEE-EEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768          323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC------RGHLR-ISFGG--LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------~~~iR-i~~~~--~~~~~~~~~~~~l~~~l~~~  386 (400)
                      |++++    +..++...|. ++||.+.| ..+..      ++++| ++++.  ++++++++++++|+++++++
T Consensus       304 ~~~~~----~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~  370 (371)
T 2e7j_A          304 FFHAE----VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  370 (371)
T ss_dssp             EEECH----HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEECC----CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence            88886    4677888775 88999987 33322      68999 99985  58999999999999998753

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=2e-34  Score=273.64  Aligned_cols=326  Identities=10%  Similarity=0.037  Sum_probs=252.5

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (400)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~-i~~~~g~t~a~~~~~~~l~~~gd~vlv~  119 (400)
                      +.++++++++++.+...    ..|  ......+.+++++++++.++.+.++ +++++|++++++.++.++.++||+|+++
T Consensus        21 p~~~~~~v~~a~~~~~~----~~~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~   94 (411)
T 3nnk_A           21 PINADPRVLRAMSSQLI----GQY--DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVP   94 (411)
T ss_dssp             CCCCCHHHHHHHTSCCC----CTT--CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCCHHHHHHhhcccc----ccc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEe
Confidence            34567888887765432    112  2223456677777777777887665 7888999999999999999999999999


Q ss_pred             CCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768          120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (400)
Q Consensus       120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~  196 (400)
                      .|+|++  +...++..|++++.+ |.+++ +.+|++++++.+++ ++  ++|++++|+||||.+.|   +++|.++|++|
T Consensus        95 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~  167 (411)
T 3nnk_A           95 VFGRFGHLLCEIARRCRAEVHTI-EVPWG-EVFTPDQVEDAVKRIRP--RLLLTVQGDTSTTMLQP---LAELGEICRRY  167 (411)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred             cCCchHHHHHHHHHHcCCeEEEE-ecCCC-CCCCHHHHHHHHhhCCC--eEEEEeCCCCCcceecc---HHHHHHHHHHc
Confidence            999987  788889999999999 88654 46799999999985 54  99999999999999999   88999999999


Q ss_pred             CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015768          197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------------  261 (400)
Q Consensus       197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~---------------  261 (400)
                      |+++|+|++++...   .+......+.++++.|+||+++ ++.++|+++.+   +++++.+....               
T Consensus       168 ~~~li~Dea~~~~~---~~~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~~gg~  240 (411)
T 3nnk_A          168 DALFYTDATASLGG---NPLETDVWGLDAVSAGMQKCLG-GPSGTSPITLS---ARMEEAIRRRKCVEEGIRTDAHRDGD  240 (411)
T ss_dssp             TCEEEEECTTTBTT---BCCCTTTTTCSEEECCSTTTTC-CCSSEEEEEEC---HHHHHHHHTTCCCCGGGCCTTCCCCS
T ss_pred             CCEEEEECCcccCC---cccchhccCCcEEEecCccccC-CCCceEEEEEC---HHHHHHHhhccccccccccccccccc
Confidence            99999999987432   2222233457799999999864 34568999998   78888776543               


Q ss_pred             ---------------------ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC--
Q 015768          262 ---------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE--  317 (400)
Q Consensus       262 ---------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--  317 (400)
                                           .....+.+...+.++..+++...++ +++..+++.++++++.+.|++++. .+..+.  
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~  319 (411)
T 3nnk_A          241 EEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGL-ETFGDLKH  319 (411)
T ss_dssp             SCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBCSCGGG
T ss_pred             CCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-EeCCCccc
Confidence                                 1123456777777777777643343 678888999999999999998754 544433  


Q ss_pred             -CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          318 -GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       318 -~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       .+.++++.++.. .+..++..+|++++||.+.+|.....++++||++ +. ++++++++++++|+++++++..
T Consensus       320 ~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~  392 (411)
T 3nnk_A          320 KMNNVLGVVIPQG-INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKF  392 (411)
T ss_dssp             BCSSEEEEECCTT-CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccEEEEECCCC-CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence             267888888753 3678899888766699999986655678999998 65 5899999999999999988654

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.6e-35  Score=278.46  Aligned_cols=342  Identities=13%  Similarity=0.041  Sum_probs=248.3

Q ss_pred             HHHHHHhcC-CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768           21 QIQELVRGA-KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA   96 (400)
Q Consensus        21 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~   96 (400)
                      ++++.|-.- ++.+.|+.+.+. ++|+++++++.+.+.+..   ...|..........+++.+.+++.+|+++++|++|+
T Consensus        15 ~~r~~fp~~~~~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~   93 (406)
T 3cai_A           15 RVRGLHPSLGDGWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGA   93 (406)
T ss_dssp             HHHHTCTTTTSSCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEES
T ss_pred             HHHHhhhhcCCCeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeC
Confidence            444445322 347888887766 678999999988886421   112321111123344444444444588888999999


Q ss_pred             ChHHHHHHHHHHh---cCCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEE
Q 015768           97 GANQAFVNIVLTL---CDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus        97 g~t~a~~~~~~~l---~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~  169 (400)
                      |+|+++..++.++   .++||+|+++.|+|+++...+..    .|++++.+ |.+++++.+|++.+++.+++++  ++|+
T Consensus        94 g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~l~~~~--~~v~  170 (406)
T 3cai_A           94 DRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWA-EVDIETGELPTWQWESLISKST--RLVA  170 (406)
T ss_dssp             CHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEE-CCCTTTCCCCGGGHHHHCCTTE--EEEE
T ss_pred             ChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEE-ecCcccCCcCHHHHHHHhCCCc--eEEE
Confidence            9999999999988   78999999999999987766544    69999999 8874445789999999997654  9999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeE-EEEccC
Q 015768          170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPS  248 (400)
Q Consensus       170 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G-~i~~~~  248 (400)
                      +++|+||||.++|   +++|.++|+++|+++|+|++|+....   +......+.+++++|+||++| ++  +| |++.+ 
T Consensus       171 ~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~---~~~~~~~~~d~~~~s~~K~~g-~~--~G~~~~~~-  240 (406)
T 3cai_A          171 VNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYR---LLDIRETDADVVTVNAHAWGG-PP--IGAMVFRD-  240 (406)
T ss_dssp             EESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTC---CCCHHHHCCSEEEEEGGGGTS-CS--CEEEEESC-
T ss_pred             EeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC---CCCchhcCCCEEEeehhhhcC-CC--cCeEEEEe-
Confidence            9999999999999   88999999999999999999984321   111112346789999999886 54  88 99998 


Q ss_pred             CcHHHHHHHHHhhc---------cCCcCccHHHHHHHHHHhcCCcH---------------HHHHHHHHHHHHHHHHHHH
Q 015768          249 EVEGFATQLLKVQD---------NIPICASIISQHLALYSLQTGPE---------------WVTERVKDLVRNREIIREA  304 (400)
Q Consensus       249 ~~~~~~~~l~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~~~~~~l~~~  304 (400)
                        +++++++.....         ....+++...+.++..+++...+               ++++..+++.++++++.+.
T Consensus       241 --~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  318 (406)
T 3cai_A          241 --PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVS  318 (406)
T ss_dssp             --HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence              677766654321         11344566665555555542111               5678888889999999999


Q ss_pred             hccCCCCcccCCC--CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC------ccC---CCCeEEEEecc-CCHHHH
Q 015768          305 LSPLGEGAVKGGE--GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACG---CRGHLRISFGG-LVEDDC  372 (400)
Q Consensus       305 L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~------~~~---~~~~iRi~~~~-~~~~~~  372 (400)
                      |++++++.+..+.  .+.++++.++.  .+..++...|. ++||.+.+|.      .++   ..+++||+++. ++++++
T Consensus       319 L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~-~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i  395 (406)
T 3cai_A          319 LRSLPLVMLIGRPEAQIPVVSFAVHK--VPADRVVQRLA-DNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEV  395 (406)
T ss_dssp             HHTCTTEEECCCCSSBCSEEEEEETT--BCHHHHHHHHH-HTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHH
T ss_pred             HhcCCCeEEcCCccccCCEEEEEECC--cCHHHHHHHHH-HCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHH
Confidence            9987655555542  13367777764  35778888775 7899999987      333   24799999997 789999


Q ss_pred             HHHHHHHHH
Q 015768          373 KAAADRLRR  381 (400)
Q Consensus       373 ~~~~~~l~~  381 (400)
                      ++++++|++
T Consensus       396 ~~~~~~l~~  404 (406)
T 3cai_A          396 DQLVRALAS  404 (406)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            999998875

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=1.4e-34  Score=272.06  Aligned_cols=323  Identities=17%  Similarity=0.093  Sum_probs=247.5

Q ss_pred             CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768           42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (400)
Q Consensus        42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~--~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~  119 (400)
                      .++++++++++.+.+...    +  .....+..+++.+++++.+|.++  +++++|+|+++++. ++.++.++||+|+++
T Consensus        11 ~~~~~~v~~a~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~   83 (384)
T 3zrp_A           11 TTIKEDVLVAGLENNVGF----T--SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVV   83 (384)
T ss_dssp             SCCCHHHHHHTTCCSCCT----T--SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEE
T ss_pred             CCCCHHHHHHhhcccccc----c--cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEe
Confidence            456788888887765432    1  12234556666666666668877  89999999999999 999999999999999


Q ss_pred             CCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      .|+|++  +...++..|++++.+ |.++++ .+|++.+++.+++.. +++|++++|+||||.+.|   +++|.++|++||
T Consensus        84 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~-~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  157 (384)
T 3zrp_A           84 SNGVFGDRWEQIFKRYPVNVKVL-RPSPGD-YVKPGEVEEEVRKSE-YKLVALTHVETSTGVREP---VKDVINKIRKYV  157 (384)
T ss_dssp             CSSHHHHHHHHHHTTSSCEEEEE-CCSTTC-CCCHHHHHHHHHHSC-EEEEEEESEETTTTEECC---HHHHHHHHGGGE
T ss_pred             cCCcchHHHHHHHHHcCCcEEEe-cCCCCC-CCCHHHHHHHHHhCC-CcEEEEeCCCCCCceECc---HHHHHHHHHhcC
Confidence            999976  556667889999999 887654 689999999998632 499999999999999999   889999999999


Q ss_pred             CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH-------------HHhh---
Q 015768          198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-------------LKVQ---  261 (400)
Q Consensus       198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l-------------~~~~---  261 (400)
                      +++|+|++++....   +......+.+++++|+||+++ ++.++|+++.+   +++++++             ....   
T Consensus       158 ~~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (384)
T 3zrp_A          158 ELIVVDGVSSVGAE---EVKAEEWNVDVYLTASQKALG-SAAGLGLLLLS---PKALSILDSQNSIAGYYLDLRNWLPVM  230 (384)
T ss_dssp             EEEEEECTTTTTTS---CCCTTTTTCSEEEEETTSTTC-CCSSEEEEEEC---HHHHHHHHHCCCSCCSTTCHHHHHHHH
T ss_pred             CEEEEECcccccCc---cccccccCCCEEEecCccccc-CCCceEEEEEC---HHHHHHhcCCCCCCcccccHHHHHHHH
Confidence            99999999884332   222223457799999999985 34558999998   6776666             2211   


Q ss_pred             ------ccCCc-CccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCC
Q 015768          262 ------DNIPI-CASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEK  329 (400)
Q Consensus       262 ------~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~  329 (400)
                            ....+ +++...+.++..+++...++ ++++.++++++++++.+.|++++ +.+..+.    .+.++++.++. 
T Consensus       231 ~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-  308 (384)
T 3zrp_A          231 RGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILKV-  308 (384)
T ss_dssp             HHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECSS-
T ss_pred             HhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECCC-
Confidence                  11222 55666666666666642222 67888889999999999999884 4555554    46788888876 


Q ss_pred             CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                       .+..++...|. ++||.+.+|..+.. +++|++++. ++++++++++++|+++++++...
T Consensus       309 -~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~  366 (384)
T 3zrp_A          309 -ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP  366 (384)
T ss_dssp             -SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             -CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence             46888998886 67999998874433 899999886 79999999999999999987643

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=2.4e-35  Score=277.33  Aligned_cols=325  Identities=17%  Similarity=0.138  Sum_probs=242.8

Q ss_pred             CCcHHHHHHHHHhhcCCCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc----CCCCE
Q 015768           43 QPPKMAMEKVKELVWDPSIS---KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS  115 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~----~~gd~  115 (400)
                      ++|+.+++++.+.+.+....   .|....+.....+++.+++++.+|++++++++|+|+++|+..++.++.    ++||+
T Consensus        11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~   90 (382)
T 4eb5_A           11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH   90 (382)
T ss_dssp             CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred             CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCE
Confidence            57899999999988652111   132211223455556666666668888899999999999999999998    89999


Q ss_pred             EEEeCCCccchhHHHH---hcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          116 VVMFAPYYFNSYMSFQ---MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       116 vlv~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      |+++.|+|+++...++   ..|++++.+ |.+++ +.+|++.+++.+++++  ++|++++|+||||.+++   +++|.++
T Consensus        91 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l  163 (382)
T 4eb5_A           91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKY-GEVDVSFIDQKLRDDT--ILVSVQHANNEIGTIQP---VEEISEV  163 (382)
T ss_dssp             EEEETTCCHHHHHHHHHHTTTTCEEEEE-CBCTT-SCBCHHHHHHHCCTTE--EEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred             EEECCCcchHHHHHHHHHHhCCcEEEEe-ccCCC-CccCHHHHHHHhcCCC--eEEEEeccCCCccccCC---HHHHHHH
Confidence            9999999998877665   369999999 88754 4689999999997654  89999999999999999   8899999


Q ss_pred             HHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh-------hccCC
Q 015768          193 CKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-------QDNIP  265 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~-------~~~~~  265 (400)
                      |++||++ |+|++|+..   ..+......+.+++++|+||++|.+|  +|+++.++   +.  .+...       .....
T Consensus       164 ~~~~~~~-i~D~a~~~g---~~~~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~--~l~~~~~~~~~~~~~~~  232 (382)
T 4eb5_A          164 LAGKAAL-HIDATASVG---QIEVDVEKIGADMLTISSNDIYGPKG--VGALWIRK---EA--KLQPVILGGGQENGLRS  232 (382)
T ss_dssp             HTTSSEE-EEECTTTBT---TBCCCHHHHTCSEEEEETGGGTCCSS--CEEEEEET---TC--CCCCSSCSSCTGGGTSC
T ss_pred             HHHCCCE-EEEcchhcC---CcccCccccCCCEEEeehHHhcCCCc--eEEEEEcc---cc--ccCceecCCCccccccC
Confidence            9999999 999999832   21111111246789999999987555  68888774   21  11111       11223


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      .+++...+.++..+++...++++++.++++++++++.+.|++++++.+..+.+   +.++++.++.  .+..++.+.|. 
T Consensus       233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~-  309 (382)
T 4eb5_A          233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLD-  309 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--SCHHHHHHHHH-
T ss_pred             CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC--cCHHHHHHHHH-
Confidence            45566666666666654334567888889999999999999886555555431   4567777763  36788888875 


Q ss_pred             hcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          343 RHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       343 ~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ++||.+.+|..|..                   ++++||+++. ++++++++++++|+++++++.+
T Consensus       310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  375 (382)
T 4eb5_A          310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             HHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            78999999976532                   4799999996 7899999999999999988765

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=5e-35  Score=276.54  Aligned_cols=327  Identities=14%  Similarity=0.132  Sum_probs=248.0

Q ss_pred             CCCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCCCC
Q 015768           38 GVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGD  114 (400)
Q Consensus        38 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~gd  114 (400)
                      +.++.++++++++++.+.+..    .|.+.  ....++++++++++    |.+++ ++++|+|+++++..++.++.++||
T Consensus        23 ~~~p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t~al~~~~~~~~~~gd   94 (396)
T 2ch1_A           23 GPGPSNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF----QTENRATMCVSGSAHAGMEAMLSNLLEEGD   94 (396)
T ss_dssp             SSSSCCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH----TCCCSCEEEESSCHHHHHHHHHHHHCCTTC
T ss_pred             cCCCCCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh----CCCCCcEEEECCcHHHHHHHHHHHhcCCCC
Confidence            444556778888887665432    23221  12445566666555    77777 899999999999999999999999


Q ss_pred             EEEEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768          115 SVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (400)
Q Consensus       115 ~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~  191 (400)
                      +|+++.|+|+++.  ..++..|++++.+ |.+++ +.+|++.+++.+++ ++  ++|++++|+||||.+++   +++|.+
T Consensus        95 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---~~~i~~  167 (396)
T 2ch1_A           95 RVLIAVNGIWAERAVEMSERYGADVRTI-EGPPD-RPFSLETLARAIELHQP--KCLFLTHGDSSSGLLQP---LEGVGQ  167 (396)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCTT-SCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHH
T ss_pred             eEEEEcCCcccHHHHHHHHHcCCceEEe-cCCCC-CCCCHHHHHHHHHhCCC--CEEEEECCCCCCceecC---HHHHHH
Confidence            9999999999874  4678899999999 87654 56899999999986 55  99999999999999999   889999


Q ss_pred             HHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------
Q 015768          192 LCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------  261 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----------  261 (400)
                      +|+++|+++|+|++|+..   ..+......+.++++.|++|+++ ++.++|+++.+   +++++.+....          
T Consensus       168 l~~~~~~~li~Dea~~~g---~~~~~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~  240 (396)
T 2ch1_A          168 ICHQHDCLLIVDAVASLC---GVPFYMDKWEIDAVYTGAQKVLG-APPGITPISIS---PKALDVIRNRRTKSKVFYWDL  240 (396)
T ss_dssp             HHHHTTCEEEEECTTTBT---TBCCCTTTTTCCEEECCCC-CCC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCGGGCH
T ss_pred             HHHHcCCEEEEEcccccc---CCccchhhcCcCEEEEcCCcccc-CCCCeEEEEEC---HHHHHhhhhccCcccceEech
Confidence            999999999999999832   22222222345678899999875 34456999988   67777664310          


Q ss_pred             -------------ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC----ceEEE
Q 015768          262 -------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIYLW  323 (400)
Q Consensus       262 -------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~~~~~  323 (400)
                                   .....+++...+.++..+++.. .+++++..++++++++++.+.|++++ +.+..+.+    +.+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~  319 (396)
T 2ch1_A          241 LLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMG-LDIFVKDPRHRLPTVTG  319 (396)
T ss_dssp             HHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCBSSCSGGGBCTTEEE
T ss_pred             HHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CeeccCCccccCCceEE
Confidence                         1123456777888777777642 23467788889999999999998884 45655543    24788


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +.++.. .+..++..+|++++||.+.+|..+..++++||++ +. .+++++++++++|+++++++..
T Consensus       320 ~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~  385 (396)
T 2ch1_A          320 IMIPKG-VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP  385 (396)
T ss_dssp             EECCTT-CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEcCCC-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence            888643 3678899888755699999988776789999999 53 5899999999999999988754

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=3.7e-35  Score=277.96  Aligned_cols=331  Identities=17%  Similarity=0.143  Sum_probs=252.1

Q ss_pred             cCCCeEEcCCCCCCCC--CcHHHHHHHHHhhcCCCCC----CCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH
Q 015768           28 GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPSIS----KYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN   99 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~--~~~~v~~a~~~~~~~~~~~----~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t   99 (400)
                      +++++++|+.++ +++  +++++++++.+.+.+....    .|.  ...+..++++++++++    |++ +. +++++++
T Consensus        43 ~g~~~id~~~~~-~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-~~-i~~~sGs  115 (401)
T 1fc4_A           43 DGSHVINFCANN-YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----GME-DA-ILYSSCF  115 (401)
T ss_dssp             TSCEEEECCCSC-TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----TCS-EE-EEESCHH
T ss_pred             CCccEEEeeccC-cccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----CCC-cE-EEeCChH
Confidence            567899999995 454  5899999998887641111    121  1344566777777776    665 44 5556668


Q ss_pred             HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCC
Q 015768          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGN  175 (400)
Q Consensus       100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~n  175 (400)
                      +++..++.++.++||.|+++.|+|.++...++..|++++.+ |.      .|++++++.++..    ..+++|++++|+|
T Consensus       116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n  188 (401)
T 1fc4_A          116 DANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMQELEARLKEAREAGARHVLIATDGVFS  188 (401)
T ss_dssp             HHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEE-CT------TCHHHHHHHHHHHHHTTCSSEEEEEESEET
T ss_pred             HHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEE-CC------CCHHHHHHHHHHhhccCCCceEEEEeCCcC
Confidence            89999999999999999999999999888899999999988 62      3788999888641    0259999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEccccc-cccc-CCCCc---cccCCCcEEEEecccccc-CCCcceeEEEEccCC
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYE-YFMY-DGRKH---CCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSE  249 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~-~~~~~---~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~  249 (400)
                      |||.+++   +++|.++|++||+++|+||+|+ ++.. .+...   .....+.+++++|+||++ |..|   ||++.+  
T Consensus       189 ptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~--  260 (401)
T 1fc4_A          189 MDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAAR--  260 (401)
T ss_dssp             TTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEEC--
T ss_pred             CCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcC--
Confidence            9999999   8999999999999999999996 6543 23221   122235679999999999 4343   999998  


Q ss_pred             cHHHHHHHHHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC
Q 015768          250 VEGFATQLLKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP  327 (400)
Q Consensus       250 ~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  327 (400)
                       +++++.+....  ...+.+++.+.+.++..+++...+ .++..++++++++++.+.|++++. .+. +..++++|+.++
T Consensus       261 -~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~  336 (401)
T 1fc4_A          261 -KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA-GSELRDRLWANARQFREQMSAAGF-TLA-GADHAIIPVMLG  336 (401)
T ss_dssp             -HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHTTC-CBC-CSSSSEEEEEEE
T ss_pred             -HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-ccc-CCCCCEEEEEcC
Confidence             78888887644  223557888999988888874211 357778889999999999998853 555 445888898886


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .. .+..++...|. ++||.+.++..|+.   .+++||+++. ++++++++++++|+++++++
T Consensus       337 ~~-~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  397 (401)
T 1fc4_A          337 DA-VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             CH-HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             Ch-HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence            42 14567888776 67999999887753   4589999985 79999999999999998875

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=3.1e-34  Score=272.86  Aligned_cols=324  Identities=13%  Similarity=0.125  Sum_probs=248.6

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEE-EeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVM-VTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~-~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      +.++.+++++.+    .....|.  ....+..+++++++++.+|.+++.++ +++|+|+++..++.++.++||+|+++.|
T Consensus        21 ~~~~~v~~a~~~----~~~~~~~--~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~   94 (416)
T 3isl_A           21 EVDPRVLRVMST----PVVGQFD--PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIY   94 (416)
T ss_dssp             CCCHHHHHHTTS----CCCCTTS--HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             CcCHHHHHHhcc----cCCCCcc--HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecC
Confidence            345666655444    2222232  22356677788888888898877766 8899999999999999999999999999


Q ss_pred             Cccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768          122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS  198 (400)
Q Consensus       122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~  198 (400)
                      +|++  +...++..|++++.+ |.++++ .+|++++++.++ +++  ++|++++|+||||.+.|   +++|.++|++||+
T Consensus        95 ~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  167 (416)
T 3isl_A           95 GRFGYLLTEIAERYGANVHML-ECEWGT-VFDPEDIIREIKKVKP--KIVAMVHGETSTGRIHP---LKAIGEACRTEDA  167 (416)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CHHHHHHHHHTTC
T ss_pred             CcccHHHHHHHHhcCCeeEEE-ecCCCC-CCCHHHHHHHHhhCCC--cEEEEEccCCCCceecC---HHHHHHHHHHcCC
Confidence            9988  667888999999999 887665 689999999998 455  99999999999999999   8899999999999


Q ss_pred             EEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-----------------
Q 015768          199 WLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-----------------  261 (400)
Q Consensus       199 ~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-----------------  261 (400)
                      ++|+|++++....   +......+.+++++|+||+++ ++.++|+++.+   +++++.+....                 
T Consensus       168 ~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~---~~~~~~~~~~~~~~~Gw~~~~~~~~~~g  240 (416)
T 3isl_A          168 LFIVDAVATIGGC---EVKVDEWKIDAAIGGTQKCLS-VPSGMAPITYN---ERVADVIAARKKVERGIATQADRAALSG  240 (416)
T ss_dssp             EEEEECTTTTTTS---CCCTTTTTCSEEECCSSSTTC-CCSSEEEEEEC---HHHHHHHHTC------------------
T ss_pred             EEEEECCccccCC---CcchhhcCCCEEEecCccccC-CCCCeEEEEEC---HHHHHHhhccccccccccccccchhccC
Confidence            9999999874322   222223457799999999863 34568999988   78877776321                 


Q ss_pred             ---------------------ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCCC-
Q 015768          262 ---------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEG-  318 (400)
Q Consensus       262 ---------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-  318 (400)
                                           .....+.+...+.++..+++...++ +++..+++.++++++.+.|++.+ +.+..+.. 
T Consensus       241 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~  319 (416)
T 3isl_A          241 NRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMG-LRLFGDDSC  319 (416)
T ss_dssp             CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBCSCGGG
T ss_pred             CCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCccc
Confidence                                 1123356777777777777653344 67888999999999999999874 35555532 


Q ss_pred             --ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH-HHHHHHHHHHHHHHHhc
Q 015768          319 --AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD-CKAAADRLRRGLEELVK  388 (400)
Q Consensus       319 --~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~-~~~~~~~l~~~l~~~~~  388 (400)
                        +.++++.++.. .+..++.+.|.+++||.+.+|.....++++|++++. .++++ +++++++|+++++++..
T Consensus       320 ~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~  392 (416)
T 3isl_A          320 KMPVVTCVEIPGG-IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNA  392 (416)
T ss_dssp             BCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCcEEEEeCCCC-CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence              56788888643 368889998875569999998866668899999954 45555 99999999999998743

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=2.4e-34  Score=271.36  Aligned_cols=326  Identities=13%  Similarity=0.104  Sum_probs=249.2

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (400)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~  119 (400)
                      +.++++++++++.+....    .+  ........+++++++++.++.+.+ ++++|+|+++++..++.++.++||+|+++
T Consensus        31 p~~~~~~v~~a~~~~~~~----~~--~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~  104 (393)
T 3kgw_A           31 PSNLAPRVLAAGSLRMIG----HM--QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTG  104 (393)
T ss_dssp             CCCCCHHHHHHTTCCCCC----TT--SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCCHHHHHHhcccccC----cc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEE
Confidence            445678888877664322    12  122345566667777777787654 59999999999999999999999999999


Q ss_pred             CCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768          120 APYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (400)
Q Consensus       120 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~  196 (400)
                      .++|++.  ...++..|.+++.+ |.++++ .+|++++++.+++ ++  ++|++++|+||||.+.+   +++|.++|++|
T Consensus       105 ~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~  177 (393)
T 3kgw_A          105 TNGIWGMRAAEIADRIGARVHQM-IKKPGE-HYTLQEVEEGLAQHKP--VLLFLVHGESSTGVVQP---LDGFGELCHRY  177 (393)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred             eCCchhHHHHHHHHHcCCceEEE-eCCCCC-CCCHHHHHHHHhhCCC--cEEEEeccCCcchhhcc---HHHHHHHHHHc
Confidence            9988643  56778899999999 887665 6899999999986 55  99999999999999999   88999999999


Q ss_pred             CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc--------------
Q 015768          197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--------------  262 (400)
Q Consensus       197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~--------------  262 (400)
                      |+++|+|++|+..   .........+.++++.|+||+++ ++.++|+++.+   +++++.+.....              
T Consensus       178 ~~~li~De~~~~g---~~~~~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (393)
T 3kgw_A          178 QCLLLVDSVASLG---GVPIYMDQQGIDIMYSSSQKVLN-APPGISLISFN---DKAKYKVYSRKTKPVSFYTDITYLAK  250 (393)
T ss_dssp             TCEEEEECTTTTT---TSCCCTTTTTCCEEEEESSSTTC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHH
T ss_pred             CCEEEEECCcccc---CcccchhhcCCCEEEecCccccc-CCCceeEEEEC---HHHHHHHhccCCCCCceeecHHHHHH
Confidence            9999999998733   22222233456788999999884 34458999998   788888765321              


Q ss_pred             ---------cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEeeCCC
Q 015768          263 ---------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWARLPE  328 (400)
Q Consensus       263 ---------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~~  328 (400)
                               ...++.+...+.++..+++... .++++..+++.++++++.+.|++++. .+..+    ..+.++++.++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~  329 (393)
T 3kgw_A          251 LWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGL-KFFVKDPEIRLPTITTVTVPA  329 (393)
T ss_dssp             HTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSSSSGGGBCSSEEEEECCT
T ss_pred             hhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcCCeEEEEeCCC
Confidence                     1134567777777777766422 23678888999999999999998854 54422    235677788875


Q ss_pred             CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .. +..++..+|++++||.+.+|..+..++++|+++ +. .+++++++++++|+++++++.+
T Consensus       330 ~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~  390 (393)
T 3kgw_A          330 GY-NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK  390 (393)
T ss_dssp             TB-CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred             CC-CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence            43 678899888755599999998777789999998 65 5899999999999999988654

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=1.2e-35  Score=280.12  Aligned_cols=337  Identities=15%  Similarity=0.078  Sum_probs=246.7

Q ss_pred             HHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-CC-----CCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEE
Q 015768           22 IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-IS-----KYGA-DEGLPELRDALVKKLNQENKLYKSSVMV   94 (400)
Q Consensus        22 ~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-----~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~   94 (400)
                      +++.|.-.++.+.|+.+.. .+.|+.+++++.+.+.+.. ..     .|+. ..+..++++.+++++    |++++++++
T Consensus         7 ~r~~f~~~~~~i~l~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g~~~~~v~~   81 (390)
T 1elu_A            7 SLHQFPGLANKTYFNFGGQ-GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----NVDPNTITI   81 (390)
T ss_dssp             ---CCGGGTTSEECCTTTC-CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----TSCGGGEEE
T ss_pred             HHHhcCCCCCeEEecCCcc-CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----CCCHHHEEE
Confidence            3344444467899988763 3567889999988876421 01     2321 134556666666665    788889999


Q ss_pred             eCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEE
Q 015768           95 TAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLV  168 (400)
Q Consensus        95 ~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v  168 (400)
                      |+|+++++..++.++ .++||+|+++.|+|+++...    .+..|++++.+ |.++ +++.+|++.+++.+++++  ++|
T Consensus        82 ~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~--~~v  158 (390)
T 1elu_A           82 TDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF-PVAATLNQGDAAAVLANHLGPKT--RLV  158 (390)
T ss_dssp             ESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE-CCGGGSSSSCHHHHHHTTCCTTE--EEE
T ss_pred             eCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEE-cCCCCCCccchHHHHHHhcCCCc--eEE
Confidence            999999999999999 79999999999999987654    46679999999 8753 345789999999987654  999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHH----HcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768          169 SVVNPGNPSGTYIPERLLKRISDLCK----AAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI  244 (400)
Q Consensus       169 ~l~~p~nptG~~~~~~~l~~i~~l~~----~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i  244 (400)
                      ++++|+||||.++|   +++|.++|+    +||+++|+|++|+.+.   .+......+.+++++|+||++. +|.++||+
T Consensus       159 ~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~---~~~~~~~~~~d~~~~s~~K~~~-~~~g~G~~  231 (390)
T 1elu_A          159 ILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS---LPLDFSRLEVDYYAFTGHKWFA-GPAGVGGL  231 (390)
T ss_dssp             EEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT---BCCCTTTSCCSEEEEESSSTTC-CCTTCEEE
T ss_pred             EEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC---cCCChhhcCCCEEEcccccccc-CCCceEEE
Confidence            99999999999999   899999999    9999999999998432   2222223456799999999553 56678999


Q ss_pred             EccCCcHHHHHHHHHhh----------------------ccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHH
Q 015768          245 AYPSEVEGFATQLLKVQ----------------------DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREI  300 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~  300 (400)
                      +.+   +++++.+....                      .....+++.+.+.++..+++..  .++++++.+++++++++
T Consensus       232 ~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~  308 (390)
T 1elu_A          232 YIH---GDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEF  308 (390)
T ss_dssp             EEC---TTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             EEC---HHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            998   55555544311                      1123355666666666665531  12367888899999999


Q ss_pred             HHHHhccCCCCcccCC--CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768          301 IREALSPLGEGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD  377 (400)
Q Consensus       301 l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~  377 (400)
                      +.+.|++++++.+..|  ..+.+++++++.. .+..++..+|. ++||.+.+|.   .++++||+++. .++++++++++
T Consensus       309 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~  383 (390)
T 1elu_A          309 LWRGLNQLPHVHCLATSAPQAGLVSFTVDSP-LGHRAIVQKLE-EQRIYLRTIA---DPDCIRACCHYITDEEEINHLLA  383 (390)
T ss_dssp             HHHHHHHSTTEEESCSSCCSSSEEEEEECSS-SCHHHHHHHHH-HTTEECEEET---TTTEEEEECCTTCCHHHHHHHHH
T ss_pred             HHHHHHhcCCcEEecCccccccEEEEEcCCC-CCHHHHHHHHH-HCCEEEEecC---CCCeEEEecccCCCHHHHHHHHH
Confidence            9999998855455532  1244555577643 36778888885 7899999876   46899999965 79999999998


Q ss_pred             HHHH
Q 015768          378 RLRR  381 (400)
Q Consensus       378 ~l~~  381 (400)
                      +|++
T Consensus       384 ~l~~  387 (390)
T 1elu_A          384 RLAD  387 (390)
T ss_dssp             HHTT
T ss_pred             HHHh
Confidence            8865

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=4.7e-35  Score=275.01  Aligned_cols=326  Identities=18%  Similarity=0.149  Sum_probs=243.8

Q ss_pred             CCcHHHHHHHHHhhcCCCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc----CCCCE
Q 015768           43 QPPKMAMEKVKELVWDPSIS---KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS  115 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~----~~gd~  115 (400)
                      ++|+.+++++.+.+.+....   .|....+..++.+++.+++++.+|++++++++++|+++++..++.++.    ++||+
T Consensus        11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~   90 (382)
T 4hvk_A           11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH   90 (382)
T ss_dssp             CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred             CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCE
Confidence            56789999999988652111   121122335666777777777779888999999999999999999998    89999


Q ss_pred             EEEeCCCccchhHHHHh---cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          116 VVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       116 vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      |+++.++|+++...++.   .|++++.+ |.++++ .+|++++++.+++++  ++|++++|+||||.+.+   +++|.++
T Consensus        91 vi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---~~~i~~l  163 (382)
T 4hvk_A           91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKYG-EVDVSFIDQKLRDDT--ILVSVQHANNEIGTIQP---VEEISEV  163 (382)
T ss_dssp             EEEETTCCHHHHHHHHHHHHTTCEEEEE-CBCTTS-CBCHHHHHHHCCTTE--EEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHHHhcCCEEEEe-ccCCCC-CcCHHHHHHHhccCc--eEEEEECCCCCceeeCC---HHHHHHH
Confidence            99999999988875544   69999999 887554 789999999998765  99999999999999999   8899999


Q ss_pred             HHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCC
Q 015768          193 CKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIP  265 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------~~~~  265 (400)
                      |++||+ +|+|++|+....   +......+.+++++|+||.+|.+|  +|+++.+++   .  .+....       ....
T Consensus       164 ~~~~~~-li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~---~--~~~~~~~~~~~~~~~~~  232 (382)
T 4hvk_A          164 LAGKAA-LHIDATASVGQI---EVDVEKIGADMLTISSNDIYGPKG--VGALWIRKE---A--KLQPVILGGGQENGLRS  232 (382)
T ss_dssp             HSSSSE-EEEECTTTBTTB---CCCHHHHTCSEEEEESGGGTSCTT--CEEEEEETT---C--CCCCSSCSSCTGGGTSC
T ss_pred             HHHcCE-EEEEhHHhcCCC---CCCchhcCCCEEEEeHHHhcCCCc--eEEEEEcCc---c--CcCcccccCCCcCcccc
Confidence            999999 999999874322   111112346799999999887555  677666632   1  111111       1123


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      .+.+...+.++..++....+++++..++++++++++.+.|++++++.+..+..   ..++++.++.  .+.+++...|. 
T Consensus       233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~-  309 (382)
T 4hvk_A          233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLD-  309 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--CCHHHHHHHHH-
T ss_pred             CCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECC--CCHHHHHHHHH-
Confidence            44567777777777664345678888999999999999999887656555432   3466666653  36778888775 


Q ss_pred             hcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          343 RHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       343 ~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      ++||.+.+|..|..                   ++++|++++. ++++++++++++|+++++++.+.
T Consensus       310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~  376 (382)
T 4hvk_A          310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM  376 (382)
T ss_dssp             HTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            78999999976642                   5789999997 78999999999999999987654

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=8.4e-35  Score=271.82  Aligned_cols=329  Identities=16%  Similarity=0.118  Sum_probs=248.4

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~  107 (400)
                      .++|+.|  +.+.|+++++++.+.+.    ..|+.  ..+..++++.+++++    |.+  ++++++|+|+++|+..++.
T Consensus         5 ~~~~~~g--p~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~~~g~t~a~~~~~~   74 (366)
T 1m32_A            5 YLLLTPG--PLTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALA----TASEGYTSVLLQGSGSYAVEAVLG   74 (366)
T ss_dssp             CEECSSS--SCCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHH----CSSSSEEEEEEESCHHHHHHHHHH
T ss_pred             cccccCC--CcCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHh----CCCCcCcEEEEecChHHHHHHHHH
Confidence            5788888  45678999988877532    11211  156788888888887    422  3579999999999999999


Q ss_pred             HhcCCCCEEEEeC-CCccc-hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          108 TLCDAGDSVVMFA-PYYFN-SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       108 ~l~~~gd~vlv~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      ++.++||+|++.. ++|.. +...++..|++++.+ |.+++ +.+|++.+++.+++++.+++|++++++||||.++|   
T Consensus        75 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---  149 (366)
T 1m32_A           75 SALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAY-DCGEV-ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---  149 (366)
T ss_dssp             HSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEE-ECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---
T ss_pred             HhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEE-eCCCC-CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---
Confidence            9999999988776 55554 456778889999999 87654 46899999999986433589999999999999999   


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----  261 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----  261 (400)
                      +++|.++|++||+++|+|++|+.+..   +......+.+++++|+||+++ ++.++||++.+   +++++++....    
T Consensus       150 l~~i~~l~~~~~~~li~Dea~~~~~~---~~~~~~~~~di~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~  222 (366)
T 1m32_A          150 IDEVGALAHRYGKTYIVDAMSSFGGI---PMDIAALHIDYLISSANKCIQ-GVPGFAFVIAR---EQKLAACKGHSRSLS  222 (366)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTS---CCCTTTTTCSEEEEESSSTTC-CCSSEEEEEEE---HHHHTTCTTCCSCST
T ss_pred             HHHHHHHHHHcCCEEEEECCccccCc---CccccccCccEEEecCccccc-CCCceEEEEEC---HHHHHhhcCCCCCcc
Confidence            88999999999999999999985432   121222356799999999884 33457999998   66665543311    


Q ss_pred             --------------ccCCcCccHHHHHHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEE
Q 015768          262 --------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYL  322 (400)
Q Consensus       262 --------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~  322 (400)
                                    ....++++.+.+.++..+++...++  +++..++++++++++.+.|++++ +.+..+   .+++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~  301 (366)
T 1m32_A          223 LDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALG-FNTLLDDELHSPIIT  301 (366)
T ss_dssp             TCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEE
T ss_pred             ccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCC-CeeccCchhcCceEE
Confidence                          1113567778887777777653333  56788889999999999998874 355443   356788


Q ss_pred             EeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          323 WARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       323 ~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      |+.++.. ..+..++.++|. ++||.+.+|..| .++++|++++. ++++++++++++|++++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  364 (366)
T 1m32_A          302 AFYSPEDPQYRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAMYW  364 (366)
T ss_dssp             EEECCCCTTCCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred             EEEcCccCCCCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            9998741 236788888886 679999998876 57899999997 6899999999999988654

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=100.00  E-value=2.8e-34  Score=271.68  Aligned_cols=326  Identities=19%  Similarity=0.178  Sum_probs=240.7

Q ss_pred             HHHhcCC-CeEEcCCCCCCCCCcHHHHHHHHHhhc---C-CCCCCCCCCCCcH---HHHHHHHHHHHhhcCCCCCcEEEe
Q 015768           24 ELVRGAK-NAVSLAQGVVYWQPPKMAMEKVKELVW---D-PSISKYGADEGLP---ELRDALVKKLNQENKLYKSSVMVT   95 (400)
Q Consensus        24 ~~~~~~~-~~i~~~~~~~~~~~~~~v~~a~~~~~~---~-~~~~~y~~~~g~~---~~~~~~a~~l~~~~~~~~~~i~~~   95 (400)
                      +....+. +...++.+.|+++.++.+.+++.+...   + .....|+. .+.+   ++++++++++    |.  ++++++
T Consensus        11 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~----g~--~~~i~~   83 (404)
T 1e5e_A           11 ACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE----KT--EACVAT   83 (404)
T ss_dssp             HHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH----TC--SEEEEE
T ss_pred             eeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh----CC--CcEEEe
Confidence            3344443 234678888999877766665554443   2 22445654 4554   6777777776    54  378888


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe
Q 015768           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~  171 (400)
                      +|+++|+..++.++.++||+|+++.|+|+++..    .++..|++++.+ |.+      |++++++.+++++  ++|+++
T Consensus        84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~t--~~v~l~  154 (404)
T 1e5e_A           84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-NTA------IPGEVKKHMKPNT--KIVYFE  154 (404)
T ss_dssp             SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT------STTHHHHHCCTTE--EEEEEE
T ss_pred             CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CCC------CHHHHHHhcCCCC--cEEEEE
Confidence            888999999999999999999999999999888    678899999998 764      6788999987655  999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee-EEEEccCC
Q 015768          172 NPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSE  249 (400)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~-~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~  249 (400)
                      +|+||||.+++   +++|.++|++ +|+++|+|++|..+.+.. +.   ..+.++++.|+||+++++|+|+ ||++.+  
T Consensus       155 ~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~-~~---~~~~di~~~S~sK~~~~~g~ri~G~~~~~--  225 (404)
T 1e5e_A          155 TPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN-PV---DFGVDVVVHSATKYINGHTDVVAGLICGK--  225 (404)
T ss_dssp             SSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC-GG---GGTCSEEEEETTTTTTCSSCCCCEEEEEC--
T ss_pred             CCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC-cc---ccCCEEEEEcCccccCCCCCCeEEEEEEC--
Confidence            99999999999   9999999999 999999999999876542 21   2467899999999999899997 999998  


Q ss_pred             cHHHHH-HHHHhhccC-CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC--------------CCcc
Q 015768          250 VEGFAT-QLLKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAV  313 (400)
Q Consensus       250 ~~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~  313 (400)
                       +++++ ++....... ..+.+++.+.++..+++.    ...+.++..++.+.+.+.|++.+              ...+
T Consensus       226 -~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~  300 (404)
T 1e5e_A          226 -ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDI  300 (404)
T ss_dssp             -HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHH
T ss_pred             -HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHH
Confidence             67776 787766544 456788888888888875    34455555666666666666543              1112


Q ss_pred             cCC----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---------------------------CCeEEE
Q 015768          314 KGG----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------------------------RGHLRI  362 (400)
Q Consensus       314 ~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------------~~~iRi  362 (400)
                      ..+    .++++.| +++.    ..+....++++.|| +.+|..|++                           ++++||
T Consensus       301 ~~~~~~~~g~~~~~-~~~~----~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRi  374 (404)
T 1e5e_A          301 AKKQMRMYGSMITF-ILKS----GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRL  374 (404)
T ss_dssp             HHHHCSSCCSEEEE-EETT----HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEE
T ss_pred             HHhhCCCCceEEEE-EeCC----CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence            222    2455555 7763    22334446678899 444443321                           579999


Q ss_pred             EeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          363 SFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      |++.   |++++++++|++++....+
T Consensus       375 s~g~---e~~~~li~~l~~al~~~~~  397 (404)
T 1e5e_A          375 SVGI---EDADELIADFKQGLDALLR  397 (404)
T ss_dssp             ECCS---SCHHHHHHHHHHHHHHHHC
T ss_pred             EeCC---CCHHHHHHHHHHHHHHHHH
Confidence            9996   8899999999999987765

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=6e-35  Score=276.55  Aligned_cols=332  Identities=13%  Similarity=0.070  Sum_probs=244.9

Q ss_pred             CCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768           29 AKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (400)
Q Consensus        29 ~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a  101 (400)
                      |+++++|..+.+ +++.+|++++++.+.+.+..      ...|+...+..++++++++++    |. ++++++++|++ +
T Consensus        45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~-~~~i~~~sG~~-a  118 (401)
T 2bwn_A           45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH----QK-EAALVFSSAYN-A  118 (401)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT----TC-SEEEEESCHHH-H
T ss_pred             CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh----CC-CcEEEECCcHH-H
Confidence            456788887664 55567789999988886411      122444445677777777776    54 57777777665 7


Q ss_pred             HHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCC
Q 015768          102 FVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS  177 (400)
Q Consensus       102 ~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~npt  177 (400)
                      +..++.++.  .+||+|+++.|+|+++...++..|++++.+ |.+      |++++++.++..  ..+++|++++|+|||
T Consensus       119 ~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~le~~l~~~~~~~~~~v~~~~~~npt  191 (401)
T 2bwn_A          119 NDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIF-RHN------DVAHLRELIAADDPAAPKLIAFESVYSMD  191 (401)
T ss_dssp             HHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEE-CTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTT
T ss_pred             HHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEE-cCC------CHHHHHHHHHhhccCCceEEEEecCcCCC
Confidence            777777664  589999999999999999999999999988 754      688888888621  235899999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC--CCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  252 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~  252 (400)
                      |.++|   +++|.++|++||+++|+|++|+.+.++.  ....   ......+++++|+||.+|++|   ||++.+   ++
T Consensus       192 G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~---~~  262 (401)
T 2bwn_A          192 GDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS---AR  262 (401)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC---HH
T ss_pred             CCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC---HH
Confidence            99999   8999999999999999999999554432  1111   111134688999999998777   999987   77


Q ss_pred             HHHHHHHhhc--cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768          253 FATQLLKVQD--NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  329 (400)
Q Consensus       253 ~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  329 (400)
                      +.+.+.....  ....+.+++.+.++..+++... ..+++..++++++++++.+.|++++ +.+..+.+ .++|+.++..
T Consensus       263 ~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~-~~~~~~~~~~  340 (401)
T 2bwn_A          263 MVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHGS-HIVPVVIGDP  340 (401)
T ss_dssp             HHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSS-SCEEEECCCH
T ss_pred             HHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCCC-CeEEEEeCCh
Confidence            7777764322  1222334577776677776422 2246778888999999999998874 46666664 4788888742


Q ss_pred             CCCHHHHHHHHHHhcCeEEeCCCccCCC---CeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          330 HLDDFEVVRWLAHRHGVVVIPGGACGCR---GHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                       .+..++..+|++++||.+.|+..++.+   +++|++++. ++++++++++++|++++++
T Consensus       341 -~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~  399 (401)
T 2bwn_A          341 -VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR  399 (401)
T ss_dssp             -HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred             -HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence             245678887765789999998876533   589999996 7999999999999988765

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=3e-35  Score=277.72  Aligned_cols=327  Identities=13%  Similarity=0.134  Sum_probs=243.7

Q ss_pred             cCCCeEEcCCCCCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++.++||+.+.+...   .+|++++++.+.+.+....   ...+..+..+++++++++.+|  ++++++++|+++|++.
T Consensus        34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~  108 (392)
T 3ruy_A           34 EGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLT---SRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVET  108 (392)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCC---CTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred             CCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccc---ccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHH
Confidence            5678999998764433   6899999999988764211   111223344455555555556  7899999999999999


Q ss_pred             HHHHhcCC----------CCEEEEeCCCccchhHHHHhcCcE-------------EEEeccCCCCCCCCCHHHHHHhhcc
Q 015768          105 IVLTLCDA----------GDSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus       105 ~~~~l~~~----------gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      ++.++..+          +|+|++..|+|++........+..             +..+ +.      .|++++++.+++
T Consensus       109 al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~  181 (392)
T 3ruy_A          109 AIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI-PY------GDLEALKAAITP  181 (392)
T ss_dssp             HHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE-CT------TCHHHHHHHCCT
T ss_pred             HHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee-Cc------ccHHHHHHHhcc
Confidence            99987644          689999999998877665444322             3333 22      179999999985


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-c
Q 015768          162 KPTPKLVSVVNPGNPSGTYIPERL-LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-W  239 (400)
Q Consensus       162 ~~~~~~v~l~~p~nptG~~~~~~~-l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~  239 (400)
                      +  +++|++++|+||||.+++.++ +++|.++|++||+++|+||+|.++...+........+....+.++||.++ +| +
T Consensus       182 ~--~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~-gG~~  258 (392)
T 3ruy_A          182 N--TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALG-GGVF  258 (392)
T ss_dssp             T--EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TTTS
T ss_pred             C--eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhh-CChh
Confidence            5  499999999999999996555 99999999999999999999987766544332221111111236789986 56 9


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccCCC
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGE  317 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~  317 (400)
                      |+||++.+   +++++.+.......+++.+++.+.++..+++.. +. ++..++++++++++.+.|++++.  +....+.
T Consensus       259 ~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  333 (392)
T 3ruy_A          259 PISCAAAN---RDILGVFEPGSHGSTFGGNPLACAVSIAALEVL-EE-EKLTERSLQLGEKLVGQLKEIDNPMITEVRGK  333 (392)
T ss_dssp             CCEEEEEC---HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH-HH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEE
T ss_pred             hhEEEEEC---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH-Hh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence            99999998   788777776666678889999999999998852 22 56778888999999999998753  3334444


Q ss_pred             CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                       +.++++.++.   +..++...|. ++||.+.||.    ++++|++++. .+++++++++++|++++
T Consensus       334 -g~~~~~~~~~---~~~~l~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          334 -GLFIGIELNE---PARPYCEQLK-AAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             -TTEEEEEESS---CSHHHHHHHH-TTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             -eeEEEEEEcc---hHHHHHHHHH-HCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence             5566666764   5678888886 8999999864    7899999776 79999999999999876

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=100.00  E-value=7.5e-34  Score=264.48  Aligned_cols=332  Identities=14%  Similarity=0.123  Sum_probs=241.3

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      .+++|+|+.+.+ .++++++++++.+.... ....|+    .....+++++++++.+| +++++++++|+++++..++.+
T Consensus         6 ~~~~id~~~~~~-~~~~~~v~~a~~~~~~~-~~~~~~----~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~   78 (356)
T 1v72_A            6 RPPALGFSSDNI-AGASPEVAQALVKHSSG-QAGPYG----TDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSA   78 (356)
T ss_dssp             CCCCCBCSCGGG-CCCCHHHHHHHHHTTSS-CCCSTT----CSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHT
T ss_pred             CCceEeeccCCc-cCCCHHHHHHHHhhccC-cccccc----cchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHH
Confidence            367899998743 46789999999887632 123343    34566666777766667 445699999999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhHH--HHhc--CcEEEEeccCCCCCCCCCHHHHHH-hhccC-----CCCeEEEEeCCCCCCc
Q 015768          109 LCDAGDSVVMFAPYYFNSYMS--FQMT--GVTHILVGPCSSKTLHPDADWLEK-TLETK-----PTPKLVSVVNPGNPSG  178 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~~~e~l~~-~l~~~-----~~~~~v~l~~p~nptG  178 (400)
                      +.++||+|+++.|+|++....  ++..  |.+++.+ |.++  +.+|++++++ .+++.     ..+++|++++|+| ||
T Consensus        79 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~--~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG  154 (356)
T 1v72_A           79 MTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV-DGPA--AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VG  154 (356)
T ss_dssp             SCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC-CCGG--GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TS
T ss_pred             hcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEe-cCCC--CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CC
Confidence            999999999999999887765  7777  9999988 7653  4689999999 88751     1358999999886 99


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCcccc--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      .+++.+++++|.++|++||+++|+|++|..+..  .+......  ..+.++++.|+||+ |. ...+||++.+   ++++
T Consensus       155 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~-~~G~g~~~~~---~~~~  229 (356)
T 1v72_A          155 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GV-LAAEAIVLFN---TSLA  229 (356)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TC-SSCEEEEESS---GGGH
T ss_pred             ccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CC-cCccEEEEEC---HHHH
Confidence            999999999999999999999999999986432  12111111  12344667799998 53 3444588887   6777


Q ss_pred             HHHHHhhccCC-c-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768          255 TQLLKVQDNIP-I-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD  332 (400)
Q Consensus       255 ~~l~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (400)
                      +++........ . ..+......+...++.  +...+..+++.++++++.+.|++++++.+..+.+++++|++++     
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----  302 (356)
T 1v72_A          230 TEMSYRRKRAGHLSSKMRFLSAQIDAYLTD--DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----  302 (356)
T ss_dssp             HHHHHHHHHTTCCCSSTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----
T ss_pred             hhHHHHhhccCchhhhHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----
Confidence            66654432111 1 1122333334455543  2234566777888999999999876556655666888998875     


Q ss_pred             HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                       .+++.+|. ++||.+.+|. |+ ++++|++++. ++++++++++++|++++++..
T Consensus       303 -~~~~~~l~-~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~  354 (356)
T 1v72_A          303 -SAMIDALL-KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ  354 (356)
T ss_dssp             -HHHHHHHH-HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred             -HHHHHHHH-hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence             26787775 7899999887 54 7899999876 789999999999999876643

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=3.8e-34  Score=271.51  Aligned_cols=352  Identities=15%  Similarity=0.119  Sum_probs=257.0

Q ss_pred             chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCC---CcHH--HHHH-HHHHHHhhcCCCC
Q 015768           16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADE---GLPE--LRDA-LVKKLNQENKLYK   89 (400)
Q Consensus        16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~~~--~~~~-~a~~l~~~~~~~~   89 (400)
                      ...+..+.+..+.+.++++|+.+.+++  ++++++++.+.+.+.....|+...   |.+.  ..+. ..+++++.+|.++
T Consensus         9 ~~i~~~~~~~~~~~~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~   86 (407)
T 2dkj_A            9 EALFELIALEEKRQREGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW   86 (407)
T ss_dssp             HHHHHHHHHHHHHHHTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred             HHHHHHHHHHHHHhhcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence            345566666666667899999999877  899999999988642233443221   4433  3333 3356777778776


Q ss_pred             CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhcCc--EEEEeccCCCCCCCCCHHHHHHhhcc-CC
Q 015768           90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGV--THILVGPCSSKTLHPDADWLEKTLET-KP  163 (400)
Q Consensus        90 ~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~--~~~~~~~~~~~~~~~~~e~l~~~l~~-~~  163 (400)
                      +++++++| ++|+..++.++.++||+|+++.|+|+++.   ..++..|.  .++.+ +.+++++.+|++.+++.++. ++
T Consensus        87 ~~i~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~  164 (407)
T 2dkj_A           87 ANVQPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSY-GVRPDTELIDLEEVRRLALEHRP  164 (407)
T ss_dssp             EECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEE-CCCTTTSSCCHHHHHHHHHHHCC
T ss_pred             ceEEecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEec-CCCcccCccCHHHHHHHHhhcCC
Confidence            55555555 56999999999999999999999998883   44555565  55555 55544567899999999974 54


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEEEeccccccCCCcceeE
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG  242 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G  242 (400)
                        ++|++++|+||  ...+   +++|.++|++||+++|+|++|+. +...+....... ..+++++|+||++  +|.|+|
T Consensus       165 --~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l--~g~~~G  234 (407)
T 2dkj_A          165 --KVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTL--RGPRGG  234 (407)
T ss_dssp             --SEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGG--CCCSCE
T ss_pred             --eEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccC--CCCCce
Confidence              89999889997  6677   89999999999999999999997 444432221111 3678899999976  477889


Q ss_pred             EEEccCCcHHHHHHHHHhhccCC-cCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCCc
Q 015768          243 YIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA  319 (400)
Q Consensus       243 ~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~  319 (400)
                      |+++++  +++++.+........ .+++.....++..+++.. .+++++..++++++++++.+.|++++ +.+.. +..+
T Consensus       235 ~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~  311 (407)
T 2dkj_A          235 LILSND--PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG-YRIVTGGTDN  311 (407)
T ss_dssp             EEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSS
T ss_pred             EEEECC--HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-ceeecCCCCc
Confidence            999885  577777776554333 334444444555666542 35678888999999999999999884 45553 3458


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc------CCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~  385 (400)
                      +++|+.++....+..++...| .++||.+.+|..+      ..++++|++++.     .+++++++++++|++++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          312 HLFLVDLRPKGLTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE  387 (407)
T ss_dssp             SEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred             eEEEEECcccCCCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence            889999875333577888877 5899999998753      236789999963     5899999999999999987

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=2.5e-35  Score=281.41  Aligned_cols=344  Identities=13%  Similarity=0.120  Sum_probs=247.9

Q ss_pred             cCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        28 ~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      +++.+++|+.+.+  +++ +++++++++.+.+.+...  ..|.+..+..++++++++++.   +-.+++|++|+|+++|+
T Consensus        39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~  115 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---GDFAKKTLLVTTGSEAV  115 (426)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---CSSCEEEEEESSHHHHH
T ss_pred             CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---cccccEEEEeCchHHHH
Confidence            4677899988764  444 689999999999876322  134456667788888888763   31348999999999999


Q ss_pred             HHHHH---HhcCCCCEEEEeCCCccchhH-HHHhcCcE-------------EEEeccCCC----CCCCCCHHHHHHhhcc
Q 015768          103 VNIVL---TLCDAGDSVVMFAPYYFNSYM-SFQMTGVT-------------HILVGPCSS----KTLHPDADWLEKTLET  161 (400)
Q Consensus       103 ~~~~~---~l~~~gd~vlv~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~~----~~~~~~~e~l~~~l~~  161 (400)
                      ..++.   ++.++| .|++.+|+|++... .+...|..             ++.+ |.+.    .++.+|++.+++.++.
T Consensus       116 ~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v-~~~~~~~~~~~~~d~~~l~~~l~~  193 (426)
T 1sff_A          116 ENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRA-LYPCPLHGISEDDAIASIHRIFKN  193 (426)
T ss_dssp             HHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEE-CCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEe-CCCccccccchHHHHHHHHHHHHh
Confidence            99988   677776 89999999988664 55555542             5556 6643    1234688999998863


Q ss_pred             ---CCCCeEEEEe-CCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC
Q 015768          162 ---KPTPKLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       162 ---~~~~~~v~l~-~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  236 (400)
                         ...+++|+++ +++| || .+++.+++++|.++|++||+++|+||+|+++.+.+........+..+.+.|+||++|.
T Consensus       194 ~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~  272 (426)
T 1sff_A          194 DAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAG  272 (426)
T ss_dssp             TCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGT
T ss_pred             ccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccC
Confidence               1224677765 4567 99 7889999999999999999999999999987655432221122222334599999984


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCc
Q 015768          237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGA  312 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~  312 (400)
                       |+|+||++.+   +++++.+.......+++.+++.+.++.++|+...+  .+..++++++++++++.|+++    +.+.
T Consensus       273 -GlriG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  346 (426)
T 1sff_A          273 -GFPLAGVTGR---AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIG  346 (426)
T ss_dssp             -SSCCEEEEEE---HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             -CCceEEEEEc---HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence             9999999998   77777665444456778899999998877764111  234566677777777777653    3222


Q ss_pred             ccCCCCceEEEeeCCCC-------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      ...+. ++++|++++..       ..+..++..+|. ++||.+.||..+  ++++||+++. .+++++++++++|+++++
T Consensus       347 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~  422 (426)
T 1sff_A          347 DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFD  422 (426)
T ss_dssp             EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence            33445 78889888421       113567888776 689999998753  6899999874 799999999999999998


Q ss_pred             HHh
Q 015768          385 ELV  387 (400)
Q Consensus       385 ~~~  387 (400)
                      ++.
T Consensus       423 ~~~  425 (426)
T 1sff_A          423 EAK  425 (426)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            753

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=2.7e-34  Score=274.54  Aligned_cols=349  Identities=11%  Similarity=0.053  Sum_probs=233.8

Q ss_pred             cCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+.++||+.+  .++++ .+|++++++.+.+.+.  ..|....+..+.++++++++.+.++.+.++|++++|+++|+..
T Consensus        27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~  104 (430)
T 3i4j_A           27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATES  104 (430)
T ss_dssp             TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHH
T ss_pred             CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence            56789999987  35555 4899999999988763  2233345667888899999998888888999999999999999


Q ss_pred             HHHHhc--------CCCCEEEEeCCCccchhHHHHhcCcE---------------EEEeccCCCC--CCCCCHHHHHHhh
Q 015768          105 IVLTLC--------DAGDSVVMFAPYYFNSYMSFQMTGVT---------------HILVGPCSSK--TLHPDADWLEKTL  159 (400)
Q Consensus       105 ~~~~l~--------~~gd~vlv~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~~--~~~~~~e~l~~~l  159 (400)
                      +++++.        .+++.|++.+|+|+++.......+..               +..+ |.++.  ....++++|++.+
T Consensus       105 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~le~~l  183 (430)
T 3i4j_A          105 AVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKL-PKPDPARNGAEDAEGLRALL  183 (430)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEE-CCCCTTSCHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEc-CCCcccchhhHHHHHHHHHH
Confidence            999886        34689999999999877554443321               1222 22111  0112558888888


Q ss_pred             cc---CCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC-CcEEEEeccccc
Q 015768          160 ET---KPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-DHVVNLFSFSKA  233 (400)
Q Consensus       160 ~~---~~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~i~~~s~sK~  233 (400)
                      +.   .+ +++|++..++| ++|. +++.+++++|.++|++||+++|+||+|.++...+........ +....+.++||+
T Consensus       184 ~~~~~~~-~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~  262 (430)
T 3i4j_A          184 EREGPET-VAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKG  262 (430)
T ss_dssp             HHHCGGG-EEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGG
T ss_pred             HhcCCCC-EEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEccc
Confidence            73   22 34555444466 7886 678889999999999999999999999988665533222222 222223468999


Q ss_pred             cCCCc-ceeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhc
Q 015768          234 YGMMG-WRVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       234 ~g~~g-~~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      ++ +| +|+||++.+   +++++.+...    ....+++.+++++.++.++|+..  ++..++..+.....++.+.+.++
T Consensus       263 l~-~G~~r~G~~~~~---~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~  338 (430)
T 3i4j_A          263 LA-AGYAPLAGLLAA---PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQA  338 (430)
T ss_dssp             GT-TTSSCCEEEEEC---HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-CCccccEEEEEC---HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH
Confidence            98 69 999999998   8899888864    44567888999999999988742  22333334444444445555444


Q ss_pred             cCCCCcccCCCCceEEEeeCCCCC--------CCHHHHHHHHHHhcCeEEeCCCcc--C-CCCeEEEEecc-CCHHHHHH
Q 015768          307 PLGEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISFGG-LVEDDCKA  374 (400)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~--~-~~~~iRi~~~~-~~~~~~~~  374 (400)
                      +++.+....+. +.++++.+....        ....+++..++ ++||.+.|+..+  + .++++||+++. .+++++++
T Consensus       339 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~  416 (430)
T 3i4j_A          339 RFPQMMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDG  416 (430)
T ss_dssp             HCTTEEEEEEE-TTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEEECCCTTCCHHHHHH
T ss_pred             hCCCeEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHH
Confidence            55554555555 667777764211        12356788776 789999987422  1 36789999885 79999999


Q ss_pred             HHHHHHHHHHHH
Q 015768          375 AADRLRRGLEEL  386 (400)
Q Consensus       375 ~~~~l~~~l~~~  386 (400)
                      ++++|+++++++
T Consensus       417 ~l~~l~~~l~~~  428 (430)
T 3i4j_A          417 LLALLAGALEDV  428 (430)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=9.6e-34  Score=268.96  Aligned_cols=329  Identities=13%  Similarity=0.115  Sum_probs=245.6

Q ss_pred             cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC--C----CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--I----SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~--~----~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      +|+.++||++++ .+++.+|++++++.+.+.+..  .    ..++......++++.+++++    +.+  ..++++++++
T Consensus        57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~  130 (409)
T 3kki_A           57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT----GFD--ECLLSQSGWN  130 (409)
T ss_dssp             CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred             CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh----CCC--eEEEecchHH
Confidence            367799998875 445678999999999887621  1    12223344556677776665    543  3566677789


Q ss_pred             HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~  180 (400)
                      ++..++.++.++||.|+++.|+|+++...++..|++++.+ +.      .|++++++.+++.. +++|++++|+||||.+
T Consensus       131 a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~-~~~vi~~~~~nptG~~  202 (409)
T 3kki_A          131 ANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPF-MH------NNCDHLRMLIQRHG-PGIIVVDSIYSTLGTI  202 (409)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEE-CT------TCHHHHHHHHHHHC-SCEEEEESBCTTTCCB
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEe-cC------CCHHHHHHHHHhcC-CeEEEECCCCCCCCCc
Confidence            9999999999999999999999999999999999999888 54      48999999998532 3999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCC--CCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      .+   +++|.++|++||+++|+||+|+.+.++.  ....   ....+.++++.|+||++|.+   .||++.+   +++++
T Consensus       203 ~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~---~~~~~  273 (409)
T 3kki_A          203 AP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR---AGAIWCN---NEVNR  273 (409)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS---CEEEEES---SSGGG
T ss_pred             CC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC---ceEEEEC---HHHHH
Confidence            99   9999999999999999999998754432  1111   11224568899999999855   4999988   45555


Q ss_pred             HHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          256 QLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       256 ~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      .+......  .+.+.++....++.++++...+ .++++++++++++++.+.|++++. .+. + .++++|+.++... +.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~-~~~~~~~~~~~~~-~~  348 (409)
T 3kki_A          274 CVPFISYPAIFSSTLLPYEAAGLETTLEIIES-ADNRRQHLDRMARKLRIGLSQLGL-TIR-S-ESQIIGLETGDER-NT  348 (409)
T ss_dssp             THHHHCHHHHHSBCCCHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHTTTC-CCC-C-SSSEEEEEEESHH-HH
T ss_pred             HHHHhCcCccccCCCcHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-ccC-C-CCCEEEEEeCCHH-HH
Confidence            55442221  2333566677777777764222 257778889999999999998864 444 3 4778888876422 35


Q ss_pred             HHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .++..+|. ++||.+.++..+.   .++++||+++. ++++++++++++|+++++.
T Consensus       349 ~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          349 EKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             HHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence            56888776 6699998765442   35799999986 7999999999999999875

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.3e-33  Score=266.80  Aligned_cols=333  Identities=14%  Similarity=0.114  Sum_probs=242.5

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+.++||+.+.  +.++ .+|++++++.+.+.+..   +.......+..+++++++.+.++  ++++++++|+++|++.
T Consensus        34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~  108 (395)
T 3nx3_A           34 KAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL---HTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEG  108 (395)
T ss_dssp             TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS---CCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred             CCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc---ccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHH
Confidence            568899999884  5555 68999999999887642   21223345677788888877777  6899999999999999


Q ss_pred             HHHHhc-------CCCCEEEEeCCCccchhHHHHhcC-------------cEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768          105 IVLTLC-------DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (400)
Q Consensus       105 ~~~~l~-------~~gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~  164 (400)
                      ++.++.       .++++|++.+|+|++........+             .++..+ |.      .|++++++.+++++ 
T Consensus       109 al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~~-  180 (395)
T 3nx3_A          109 AMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA-KY------NDISSVEKLVNEKT-  180 (395)
T ss_dssp             HHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE-CT------TCHHHHHTTCCTTE-
T ss_pred             HHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe-CC------CCHHHHHHhccCCe-
Confidence            998875       357999999999988764443332             233444 32      27899999997554 


Q ss_pred             CeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEE
Q 015768          165 PKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY  243 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~  243 (400)
                       ++|++++++|++|.+ ++.+++++|.++|++||+++|+||+|.++...+........+....+.|+||.++ +|+|+||
T Consensus       181 -~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~-~G~~~G~  258 (395)
T 3nx3_A          181 -CAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALG-CGLSVGA  258 (395)
T ss_dssp             -EEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGT-TTSCCEE
T ss_pred             -EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEeccccc-CCCceEE
Confidence             888888777777765 7888999999999999999999999997765443222222222233457899998 6899999


Q ss_pred             EEccCCcHHH-HHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768          244 IAYPSEVEGF-ATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  320 (400)
Q Consensus       244 i~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  320 (400)
                      ++.+   +++ ++.+.......+++.+++++.++.++++..  +++.++..+.....++.+.+.+..++.+....+. +.
T Consensus       259 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~  334 (395)
T 3nx3_A          259 FVIN---QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGL-GF  334 (395)
T ss_dssp             EEEC---HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TT
T ss_pred             EEEc---hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeE-EE
Confidence            9998   677 777766555678888999999999888742  2233333333333444444444445543334344 67


Q ss_pred             EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ++++.++.. .+..++...|. ++||.+.++.    ++++||+++. .+++++++++++|++++++
T Consensus       335 ~~~~~~~~~-~~~~~~~~~l~-~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  394 (395)
T 3nx3_A          335 MQGLSLDKS-VKVAKVIQKCQ-ENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS  394 (395)
T ss_dssp             EEEEEECTT-SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCc-chHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            888888753 25778888776 7899999864    7899999776 7999999999999999864

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=5.8e-34  Score=270.14  Aligned_cols=335  Identities=16%  Similarity=0.133  Sum_probs=248.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  ++++ .+|++++++.+.+.+...  ++ .....+..+++++++.+.++.  +++++|+|+++|++
T Consensus        36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~~--~~v~~~~gg~~a~~  110 (406)
T 4adb_A           36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWH--TG-NGYTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANE  110 (406)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSC--CC-TTSCCHHHHHHHHHHHHHSSC--SEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccc--cc-CCcCCHHHHHHHHHHHhhCCC--CeEEEeCcHHHHHH
Confidence            3567799999873  3343 589999999998876321  11 111234566677777776664  59999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      .++.++..       +| |.|++.+|+|+++.......+.             ++..+ |.      .|++++++.++++
T Consensus       111 ~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~  183 (406)
T 4adb_A          111 AALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHA-AY------NDINSASALIDDS  183 (406)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEE-CT------TCHHHHHTTCSTT
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEe-CC------CcHHHHHHHhcCC
Confidence            99998865       66 9999999999998755544443             22233 22      3799999998755


Q ss_pred             CCCeEEEEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCc
Q 015768          163 PTPKLVSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~--~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g  238 (400)
                      +  ++|+++ |+||+|.++  +.+++++|.++|++||+++|+||+|+++.+.+.....  .....+++  |+||.++ +|
T Consensus       184 ~--~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G  257 (406)
T 4adb_A          184 T--CAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-GG  257 (406)
T ss_dssp             E--EEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TT
T ss_pred             e--EEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-CC
Confidence            4  888888 999999988  9999999999999999999999999877665543221  11122333  6799998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccC-
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKG-  315 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~-  315 (400)
                      +|+||++.+   +++++.+.......+++.+++.+.++..+++...+  ++..++++++++++.+.|++++.  ..+.. 
T Consensus       258 ~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  332 (406)
T 4adb_A          258 FPVGALLAT---EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNTINHRYGLFSEV  332 (406)
T ss_dssp             SCCEEEEEC---HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             CCeEEEEEc---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence            999999998   78888777666667888999999999988874222  56677778888888888876432  01111 


Q ss_pred             CCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          316 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      +..+.++++.++... .+..++...|. ++||.+.++.    ++++|++++. .+++++++++++|+++++++.++
T Consensus       333 ~~~g~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~  403 (406)
T 4adb_A          333 RGLGLLIGCVLNADYAGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSR  403 (406)
T ss_dssp             EEETTEEEEEECTTTTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             EEEEEEEEEEEeCCcHHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            123677888887531 24778888886 6799999854    7899997666 79999999999999999988654

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=1e-33  Score=263.14  Aligned_cols=319  Identities=16%  Similarity=0.090  Sum_probs=237.7

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (400)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv  118 (400)
                      +.++|+++++++.+.+..   . +++  ......+++.+++++.+|.+  ++++++|+|+++|+..++.++.+  |+|++
T Consensus         8 p~~~~~~v~~a~~~~~~~---~-~~~--~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~   79 (353)
T 2yrr_A            8 PTPIPERVQKALLRPMRG---H-LDP--EVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLV   79 (353)
T ss_dssp             SCCCCHHHHGGGGSCCCC---T-TCH--HHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred             CCCCCHHHHHHHhccccc---c-cCH--HHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence            346678999888877654   1 211  12233445555555555775  68899999999999999999976  89999


Q ss_pred             eCCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015768          119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA  195 (400)
Q Consensus       119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~  195 (400)
                      +.++|+++  ...++..|++++.+ |.+++ +.+|++.+++.+++ ++  ++|++++|+||||.+++   +++|.++|++
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---~~~i~~l~~~  152 (353)
T 2yrr_A           80 LVNGAFSQRVAEMAALHGLDPEVL-DFPPG-EPVDPEAVARALKRRRY--RMVALVHGETSTGVLNP---AEAIGALAKE  152 (353)
T ss_dssp             EECSHHHHHHHHHHHHTTCCEEEE-ECCTT-SCCCHHHHHHHHHHSCC--SEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred             EcCCCchHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHHHHhCCC--CEEEEEccCCCcceecC---HHHHHHHHHH
Confidence            99999875  45567789999999 88765 46899999999986 44  89999999999999999   8899999999


Q ss_pred             cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHH--------------h
Q 015768          196 AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLK--------------V  260 (400)
Q Consensus       196 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~--------------~  260 (400)
                      ||+++|+|++|+.+.   .+......+.++++.|++|+++ .+|  +||++.+   +++++++..              .
T Consensus       153 ~~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~  224 (353)
T 2yrr_A          153 AGALFFLDAVTTLGM---LPFSMRAMGVDYAFTGSQKCLSAPPG--LAPIAAS---LEARKAFTGKRGWYLDLARVAEHW  224 (353)
T ss_dssp             HTCEEEEECTTTTTT---SCCCHHHHTCSEEECCTTSTTCCCSS--CEEEEEC---HHHHHHCCCCSCSTTCHHHHHHHH
T ss_pred             cCCeEEEEcCccccc---ccccccccCceEEEecCcccccCCCc--eEEEEEC---HHHHHHhccCCCccccHHHHhhhh
Confidence            999999999996322   2211111245688999999764 344  7999998   677665531              0


Q ss_pred             -hccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC--CceEEEeeCCCCCCCHHHH
Q 015768          261 -QDNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       261 -~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  336 (400)
                       .....++++...+.++..+++...++ +++..++++++++++.+.|+++ ++.+..+.  ++.++++.++.. .+..++
T Consensus       225 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~  302 (353)
T 2yrr_A          225 ERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEG-VDADRL  302 (353)
T ss_dssp             TTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTT-CCHHHH
T ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCC-CCHHHH
Confidence             12234466777777776776642233 6778888999999999999887 44555443  466778888643 367888


Q ss_pred             HHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHH-HHHHHHHHHHHH
Q 015768          337 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK-AAADRLRRGLEE  385 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~-~~~~~l~~~l~~  385 (400)
                      .+.|. ++||.+.+|..|..++++|++++. .++++++ +++++|+++++.
T Consensus       303 ~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~  352 (353)
T 2yrr_A          303 VRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL  352 (353)
T ss_dssp             HHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence            88886 679999999887778899999954 6888898 999999988753

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=100.00  E-value=7.5e-34  Score=263.70  Aligned_cols=330  Identities=16%  Similarity=0.187  Sum_probs=233.5

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      .+++|+|+.+.+.+ +++.+++++.+....  ...|++..+..++++++++++    |.  +++++++|+++++..++.+
T Consensus         2 ~~~~i~~~~~~~~~-p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~~~~~   72 (347)
T 1jg8_A            2 PHMMIDLRSDTVTK-PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF----GK--EAALFVPSGTMGNQVSIMA   72 (347)
T ss_dssp             ---CEECSCGGGCC-CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHH
T ss_pred             CceEEEeccccCCC-CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHh----CC--ceEEEecCcHHHHHHHHHH
Confidence            35789999998877 568888888765432  235766667778888888887    43  4788899999999999999


Q ss_pred             hcCCCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCC-ccC
Q 015768          109 LCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPS-GTY  180 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~npt-G~~  180 (400)
                      +.+|||+|+++.|+|.+...   .++..|++++.+ .. + ++.+|++.+++.+++.    ..+++|++++|+||| |.+
T Consensus        73 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~-~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~  149 (347)
T 1jg8_A           73 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG-K-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRV  149 (347)
T ss_dssp             HCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE-E-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBC
T ss_pred             hcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC-C-CCccCHHHHHHHhccccccccCceEEEEeccccccCCcc
Confidence            99999999999999976543   567789988877 32 2 3457999999998752    135999999999999 999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccc--cCCCCccccCCCcEEEEeccccccCCCcceeE-EEEccCCcHHHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQL  257 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~~~~l  257 (400)
                      +|.+++++|+++|++||+++|+|++|..+.  +.+..........+.++.|+||+++++   +| +++.+   +++++++
T Consensus       150 ~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~~~---~~~~~~~  223 (347)
T 1jg8_A          150 VPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP---VGSVVVGD---RDFIERA  223 (347)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS---SCEEEEEC---HHHHHHH
T ss_pred             CcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCC---ceEEEEcC---HHHHHHH
Confidence            999999999999999999999999975422  112111111112234556899999733   46 45666   7777776


Q ss_pred             HHhhccCC--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCCCCHH
Q 015768          258 LKVQDNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDDF  334 (400)
Q Consensus       258 ~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  334 (400)
                      ...+....  ...+...+.++..+++...+.+.    +..++++.+.+.|++++. .+ ..+..++++|++++....+..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
T 1jg8_A          224 RKARKMLGGGMRQAGVLAAAGIIALTKMVDRLK----EDHENARFLALKLKEIGY-SVNPEDVKTNMVILRTDNLKVNAH  298 (347)
T ss_dssp             HHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHH----HHHHHHHHHHHHHHHHTC-BCCGGGCCSSEEEEECTTSSSCHH
T ss_pred             HHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCc-eeccCCCcceEEEEEcccccCCHH
Confidence            65443222  22344455555555653222222    233456777777777633 33 223346789999874223678


Q ss_pred             HHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++..+|. ++||.+.++.    ++++|++++. ++++++++++++|+++++++
T Consensus       299 ~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~  346 (347)
T 1jg8_A          299 GFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  346 (347)
T ss_dssp             HHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence            8998886 7899998753    5789999875 79999999999999988753

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=8.5e-34  Score=270.03  Aligned_cols=333  Identities=14%  Similarity=0.154  Sum_probs=238.0

Q ss_pred             cCCCeEEcCCCC--CCCCC--cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQP--PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      +++.++||+.+.  ++++.  ||++++++.+.+.+..  .|+...+....+.++++.+.+.++.+ +++|++|+|+++++
T Consensus        40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~  117 (419)
T 2eo5_A           40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAI  117 (419)
T ss_dssp             TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred             CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHH
Confidence            467799998887  45543  7999999999987642  23222333456677777777777877 78999999999999


Q ss_pred             HHHHHHhcC-CCCEEEEeCCCccchhHHHH-hc--------C-----cEEEEeccCCCCCCC----------------CC
Q 015768          103 VNIVLTLCD-AGDSVVMFAPYYFNSYMSFQ-MT--------G-----VTHILVGPCSSKTLH----------------PD  151 (400)
Q Consensus       103 ~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~-~~--------g-----~~~~~~~~~~~~~~~----------------~~  151 (400)
                      +.+++++.. +||+|++.+|+|++...... ..        +     ..++.+ |.++. +.                ++
T Consensus       118 ~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~-~~~~~g~~~~~~~~~~~~~~  195 (419)
T 2eo5_A          118 EASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHV-PYPNP-YRNPWHINGYENPSELVNRV  195 (419)
T ss_dssp             HHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEE-CCCCS-SSCTTCCCTTTCHHHHHHHH
T ss_pred             HHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEE-CCCcc-ccccccccccccchhhHHHH
Confidence            999987654 48999999999987654332 21        1     245666 65432 11                35


Q ss_pred             HHHHH-HhhccC---CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCc
Q 015768          152 ADWLE-KTLETK---PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDH  223 (400)
Q Consensus       152 ~e~l~-~~l~~~---~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~  223 (400)
                      ++.++ +.++..   . ...+++++| +||||. +++.+++++|.++|++||+++|+||+|.++...+......  ....
T Consensus       196 ~~~l~~~~i~~~~~~~-~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~  274 (419)
T 2eo5_A          196 IEFIEDYIFVNLVPPE-EVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVP  274 (419)
T ss_dssp             HHHHHHTHHHHTCCGG-GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCC
T ss_pred             HHHHHHHHHhhccCCC-CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCC
Confidence            78898 888631   1 134445566 567896 6789999999999999999999999999876544321111  1112


Q ss_pred             EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      +  +.|+||.+| +| +|+||++.+   ++++ .+ ......+++.+++++.++.++|+.    ..+..++++++++++.
T Consensus       275 d--~~t~sK~~~-~G~~riG~~~~~---~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~----~~~~~~~~~~~~~~l~  342 (419)
T 2eo5_A          275 D--VITLAKALG-GGIMPIGATIFR---KDLD-FK-PGMHSNTFGGNALACAIGSKVIDI----VKDLLPHVNEIGKIFA  342 (419)
T ss_dssp             S--EEEECGGGG-TTTSCCEEEEEE---GGGC-CC-------CCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred             C--EEEeccccc-CCccceEEEEEc---hHhh-cC-CcccCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence            2  337999998 69 999999988   5555 55 323345778899999999999974    2237788889999999


Q ss_pred             HHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          303 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       303 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      +.|+++  +....+. ++|+++++........ ++..|+ ++||.+.++.    ++++||+++. .+++++++++++|++
T Consensus       343 ~~L~~~--~~~~~~~-g~~~~i~~~~~~~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~  413 (419)
T 2eo5_A          343 EELQGL--ADDVRGI-GLAWGLEYNEKKVRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKK  413 (419)
T ss_dssp             HHHTTS--SSEEEEE-TTEEEEECSCHHHHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHh--hhheEee-eEEEEEEEecCccHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            999887  2344444 6788888842111244 777776 8999999864    6799998875 799999999999999


Q ss_pred             HHHHH
Q 015768          382 GLEEL  386 (400)
Q Consensus       382 ~l~~~  386 (400)
                      +++++
T Consensus       414 ~l~~~  418 (419)
T 2eo5_A          414 VIKVV  418 (419)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            98753

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=100.00  E-value=3e-33  Score=269.38  Aligned_cols=350  Identities=12%  Similarity=-0.004  Sum_probs=247.9

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+.++||+.+.  +.++ .+|++++++.+.+.+.. ..|....+..+.+.++++++.+..+...+++++++|+++|++.
T Consensus        49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~  127 (460)
T 3gju_A           49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLA-YYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET  127 (460)
T ss_dssp             TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHS-CCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            567899998873  4454 57999999998886532 1233334456778888888888877778899999999999999


Q ss_pred             HHHHhcC--------CCCEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCC----CCCCCC--------
Q 015768          105 IVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD--------  151 (400)
Q Consensus       105 ~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~~--------  151 (400)
                      +++++..        +++.|++.+++|++........+.             .+..+ |...    +....+        
T Consensus       128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~g~~~~~~~~~~  206 (460)
T 3gju_A          128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHT-EAPYYFRRTDRSMSEEQFSQHC  206 (460)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEE-CCCCGGGCSCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEe-CCCccccCCccccChhHHHHHH
Confidence            9999874        469999999999987755443321             23333 3221    111122        


Q ss_pred             HHHHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          152 ADWLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~~-~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      +++|++.++. . ..+++|+++.++|++|. +++.+++++|.++|++||+++|+||+|.++...+........+....+.
T Consensus       207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~  286 (460)
T 3gju_A          207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI  286 (460)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred             HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence            6888888862 1 22466766666778887 7788899999999999999999999999876544322111111112234


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR  298 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~  298 (400)
                      ++||+++ +| +|+||++.+   +++++.+..       .....+++.+++++.++.++|+..  +++.++..+.....+
T Consensus       287 t~sK~l~-gG~~~lg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~  362 (460)
T 3gju_A          287 TIAKGLT-SAYAPLSGVIVA---DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFR  362 (460)
T ss_dssp             EECGGGT-TTSSCCEEEEEE---HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             eeehhhc-CCCCCeEEEEEC---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            6889997 56 899999998   788888853       244567889999999999999742  234455555556666


Q ss_pred             HHHHHHhccCCCCcccCCCCceEEEeeCCCCCC----------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768          299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  367 (400)
Q Consensus       299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~  367 (400)
                      +.+.+.+++++.+....+. +.++++.+.....          ...+++..++ ++||.+.|+.   .++++||+++. .
T Consensus       363 ~~l~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~---~~~~iRi~~~~~~  437 (460)
T 3gju_A          363 AELAKAVGGHKNVGEVRGD-GMLAAVEFVADKDDRVFFDASQKIGPQVATALA-ASGVIGRAMP---QGDILGFAPPLCL  437 (460)
T ss_dssp             HHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEECS---SSCEEEECCCTTC
T ss_pred             HHHHHHHhcCCCeEEEeee-eEEEEEEEccCccccccccchHHHHHHHHHHHH-HCCeEEecCC---CCCEEEEECCCCC
Confidence            6777777777654555555 6666666653211          1446777776 7899999865   45899999775 7


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015768          368 VEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +++++++++++|+++++++.+
T Consensus       438 t~e~i~~~l~~l~~~l~~~~~  458 (460)
T 3gju_A          438 TREQADIVVSKTADAVKSVFA  458 (460)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999988654

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=7.1e-34  Score=266.70  Aligned_cols=321  Identities=16%  Similarity=0.133  Sum_probs=240.1

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      +++.++||+.+.  ++++ +++.+++++.+.+.+..  ...| +..+..++++.+++++    |+ ++++++++|+++++
T Consensus        26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~-~~~v~~~~g~t~a~   99 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT-EGKVFFANSGTESV   99 (375)
T ss_dssp             TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS-CEEEEEESSHHHHH
T ss_pred             CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC-CCeEEEeCchHHHH
Confidence            467899999887  3566 78999999998876421  2345 3334555666555554    76 48999999999999


Q ss_pred             HHHHHH---hc---CCC-CEEEEeCCCccchhHHHHhcCcE-------------EEEeccCCCCCCCCCHHHHHHhhccC
Q 015768          103 VNIVLT---LC---DAG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus       103 ~~~~~~---l~---~~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      ..++.+   +.   +|| |+|++++|+|+++...+...+..             +..+ |.      .|++++++.++++
T Consensus       100 ~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~  172 (375)
T 2eh6_A          100 EAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYA-KL------NDIDSVYKLLDEE  172 (375)
T ss_dssp             HHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEE-CT------TCHHHHHTTCCTT
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeC-CC------chHHHHHHHhcCC
Confidence            999975   35   788 99999999998887655444322             2222 21      4899999988754


Q ss_pred             CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC--cEEEEeccccccCCCcc
Q 015768          163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD--HVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~i~~~s~sK~~g~~g~  239 (400)
                        +++|++++++||||.+ .+.+++++|.++|++||+++|+||+|+++...+........+  .+++  |+||+++ +|+
T Consensus       173 --~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~--s~SK~~~-~g~  247 (375)
T 2eh6_A          173 --TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI--ALAKGLG-GGV  247 (375)
T ss_dssp             --EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-TTS
T ss_pred             --eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE--EEccccc-CCC
Confidence              4999999999999998 568889999999999999999999999765433222111111  2333  7789998 799


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      |+||++.+   +++++.+.......+++.+++.+.++..+|+.    ..+..++++++++++.+.|++++. ....+ .+
T Consensus       248 ~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~g  318 (375)
T 2eh6_A          248 PIGAILAR---EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE----VEKLLPHVREVGNYFKEKLKELGK-GKVKG-RG  318 (375)
T ss_dssp             CCEEEEEE---HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTS-SEEEE-ET
T ss_pred             CeEEEEEc---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc-CCceE-EE
Confidence            99999998   67776665533345667788888888877764    226777888889999999988765 33333 37


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +++|++++.   +..+++..|. ++||.+.++    .++++|++++. .+++++++++++|++++
T Consensus       319 ~~~~~~~~~---~~~~~~~~l~-~~gi~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l  375 (375)
T 2eh6_A          319 LMLGLELER---ECKDYVLKAL-EKGLLINCT----AGKVLRFLPPLIIQKEHIDRAISVLREIL  375 (375)
T ss_dssp             TEEEEECSS---CCHHHHHHHH-HTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred             EEEEEEEcC---cHHHHHHHHH-HCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence            888999874   3567888886 699999885    36899999885 79999999999998763

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=3.6e-34  Score=270.82  Aligned_cols=328  Identities=12%  Similarity=0.093  Sum_probs=242.6

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++.++||+.+.  ++++ .++++++++.+.+.+...  ++. ....+.++++++.+++.+|  .+++++++|+++|+..
T Consensus        38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~  112 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEA  112 (397)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHH
T ss_pred             CCCEEEECCccccccccCCCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHH
Confidence            467799998873  3443 589999999988865321  111 1134566777777777666  5899999999999999


Q ss_pred             HHHHhcC------C-CCEEEEeCCCccchhH-HHHhcCcE------------EEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768          105 IVLTLCD------A-GDSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETKPT  164 (400)
Q Consensus       105 ~~~~l~~------~-gd~vlv~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~~~e~l~~~l~~~~~  164 (400)
                      ++.++..      + ++.|++.+|+|++... .++..|.+            ++.+ |.+      |++++++.++++  
T Consensus       113 al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~~------d~~~l~~~l~~~--  183 (397)
T 2ord_A          113 AIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYF-EFN------NVEDLRRKMSED--  183 (397)
T ss_dssp             HHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEE-CTT------CHHHHHHHCCTT--
T ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEe-cCC------CHHHHHHHhhcC--
Confidence            9998863      5 4789999999977554 66667764            5556 532      799999999764  


Q ss_pred             CeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCccee
Q 015768          165 PKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRV  241 (400)
Q Consensus       165 ~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~  241 (400)
                      +++|++++|+||||. +++.+++++|.++|++||+++|+||+|+++.+.+.....  .....+++  |+||+++ +|+|+
T Consensus       184 ~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~G~r~  260 (397)
T 2ord_A          184 VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLG-GGVPI  260 (397)
T ss_dssp             EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCC
T ss_pred             eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccC-CCcCe
Confidence            499999999999999 999999999999999999999999999876654432211  11112233  7899998 89999


Q ss_pred             EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC--C--CcccCCC
Q 015768          242 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--E--GAVKGGE  317 (400)
Q Consensus       242 G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~--~~~~~~~  317 (400)
                      ||++.++   +++ .+.......+++.+++.+.++..+|+...+  ++..++++++++++.+.|++++  .  .....+.
T Consensus       261 G~~~~~~---~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  334 (397)
T 2ord_A          261 GAVIVNE---RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGM  334 (397)
T ss_dssp             EEEEECS---TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             EEEEEch---Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEE
Confidence            9999884   444 443333445677899999988888874222  3566777888888888887652  2  1112333


Q ss_pred             CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                       +.++++.++... +..++..+|. ++||.+.++.    ++++|++++. .+++++++++++|++++++
T Consensus       335 -g~~~~~~~~~~~-~~~~l~~~l~-~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~~  396 (397)
T 2ord_A          335 -GLMIGIQFREEV-SNREVATKCF-ENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQG  396 (397)
T ss_dssp             -TTEEEEEECTTS-CHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             -eEEEEEEECChH-HHHHHHHHHH-HCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence             677888887532 5778888886 6899999863    6899999764 7999999999999998864

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=4.9e-33  Score=265.74  Aligned_cols=340  Identities=13%  Similarity=0.079  Sum_probs=238.3

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++.++||+.+.  ++++ .+|++++++.+.+.+.....+  .........++++.+.+.+++++++|++++|+++|++.
T Consensus        41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~  118 (429)
T 1s0a_A           41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF--GGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEV  118 (429)
T ss_dssp             TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCC--SSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred             CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc--cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Confidence            467789998876  4554 589999999998865321111  11122345556666666667788999999999999999


Q ss_pred             HHHHhc---C----CCCEEEEeCCCccchhHHHHh-cC-------------cEEEEeccCCC----CCC-CCCHHHHHHh
Q 015768          105 IVLTLC---D----AGDSVVMFAPYYFNSYMSFQM-TG-------------VTHILVGPCSS----KTL-HPDADWLEKT  158 (400)
Q Consensus       105 ~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~~----~~~-~~~~e~l~~~  158 (400)
                      +++++.   +    |||+|++.+|+|+++...... .|             ..+..+ +.+.    +.+ .+|++++++.
T Consensus       119 ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~~  197 (429)
T 1s0a_A          119 AMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFA-PAPQSRMDGEWDERDMVGFARL  197 (429)
T ss_dssp             HHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEE-CCCCSBC-CCCCGGGGHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEe-CCCcccccccchHHHHHHHHHH
Confidence            998764   2    689999999999886543321 11             123334 4331    122 4689999998


Q ss_pred             hccC-CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccc
Q 015768          159 LETK-PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKA  233 (400)
Q Consensus       159 l~~~-~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~  233 (400)
                      ++.. ..+++|+++.. +||||. .++.+++++|.++|++||+++|+||+|.++...+......  ....++  .|+||.
T Consensus       198 l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~--~t~sK~  275 (429)
T 1s0a_A          198 MAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDI--LCLGKA  275 (429)
T ss_dssp             HHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE--EEECGG
T ss_pred             HHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCE--EEeccc
Confidence            8731 22355554444 689996 6678899999999999999999999998765443321111  112223  378999


Q ss_pred             cCCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          234 YGMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       234 ~g~~g-~~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      ++ +| +|+||++.+   +++++.+...     ....+++.|++++.++.++++...+  .+..++++++++++.+.|++
T Consensus       276 l~-~G~~~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~  349 (429)
T 1s0a_A          276 LT-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAP  349 (429)
T ss_dssp             GG-TSSSCCEEEEEC---HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGG
T ss_pred             cc-CCCccceEEEeC---HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH
Confidence            98 68 999999988   7888887653     1335677899999988888874111  24556677788888888887


Q ss_pred             C---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          308 L---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       308 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +   +.+....+. +.++|++++.. .+..++..+|. ++||.+.+.     .+++||+++. .+++++++++++|++++
T Consensus       350 l~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~~~  421 (429)
T 1s0a_A          350 ARDAEMVADVRVL-GAIGVVETTHP-VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAV  421 (429)
T ss_dssp             GGGCTTEEEEEEE-TTEEEEEESSC-BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHT
T ss_pred             HhcCCCEEEEEEe-eEEEEEEECCc-ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            5   332323344 56888888653 25778888886 789999873     3799999875 79999999999999987


Q ss_pred             HHH
Q 015768          384 EEL  386 (400)
Q Consensus       384 ~~~  386 (400)
                      +++
T Consensus       422 ~~~  424 (429)
T 1s0a_A          422 QDE  424 (429)
T ss_dssp             SSG
T ss_pred             Hhh
Confidence            654

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=6e-33  Score=260.41  Aligned_cols=320  Identities=11%  Similarity=0.048  Sum_probs=235.3

Q ss_pred             CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-c-EEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768           42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (400)
Q Consensus        42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~-i~~~~g~t~a~~~~~~~l~~~gd~vlv~  119 (400)
                      .++|+++++++.+.+..    .+  .....++.+++++++++.+|++.+ + +++++|++++++.++.++.++||+|+++
T Consensus        28 ~~~~~~v~~a~~~~~~~----~~--~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~  101 (376)
T 3f0h_A           28 VMSSEEVRAIGAEQVPY----FR--TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVI  101 (376)
T ss_dssp             CCCCHHHHHHHTSCCCC----CS--SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEE
T ss_pred             CCCcHHHHHHhcCCCCC----CC--CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEE
Confidence            45689999888775532    12  223456777888888888888642 4 4558999999999999999999999999


Q ss_pred             CCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          120 APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       120 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      .|+|++..  ..++..|++++.+ +.+.+ +.+|++.+++.+++++  +++++++|+||||.++|   +++|.++|++||
T Consensus       102 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  174 (376)
T 3f0h_A          102 DGGSFGHRFVQLCEIHEIPYVAL-KLEHG-KKLTKEKLYEYDNQNF--TGLLVNVDETSTAVLYD---TMMIGEFCKKNN  174 (376)
T ss_dssp             ESSHHHHHHHHHHHHTTCCEEEE-ECCTT-CCCCHHHHHTTTTSCC--CEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred             eCChhhHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHhhccCc--eEEEEecccCCcceecC---HHHHHHHHHHcC
Confidence            99887744  3467789998888 77643 5789999999876655  99999999999999999   999999999999


Q ss_pred             CEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc--------------
Q 015768          198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD--------------  262 (400)
Q Consensus       198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~--------------  262 (400)
                      +++|+|++++.+...   ......+.++++.|+||+++ .+|  +|+++.+   +++++++.....              
T Consensus       175 ~~li~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (376)
T 3f0h_A          175 MFFVCDCVSAFLADP---FNMNECGADVMITGSQKVLACPPG--ISVIVLA---PRGVERVEKSKVRTMYFDLKDALKNQ  246 (376)
T ss_dssp             CEEEEECTTTTTTSC---CCHHHHTCSEEEEETTTTTCCCSS--CEEEEEC---HHHHHHHHTCCCCCSTTCHHHHHHHH
T ss_pred             CEEEEEcCccccCcc---ccccccCccEEEecCcccccCCCc--eEEEEEC---HHHHHHhhcCCCCceeecHHHHHhhc
Confidence            999999999854321   11122345688999999997 444  6888888   788777764211              


Q ss_pred             ---cCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-CceEEEeeCCCCCCCHHHH
Q 015768          263 ---NIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       263 ---~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  336 (400)
                         ...++++...+.++..+++...+  .+++..+++.++++++.+.|++++. .+..+. ...++.+..+  ..+..++
T Consensus       247 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~l  323 (376)
T 3f0h_A          247 ERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPF-ELVSESPANGVTSVHPT--TANAYDI  323 (376)
T ss_dssp             TTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSE-EECCSSBBTTEEEEEES--SSCHHHH
T ss_pred             ccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-ccCccccCceEEEEeCC--CCCHHHH
Confidence               12345555444555555542112  4677888889999999999998864 333322 2222333322  2367889


Q ss_pred             HHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          337 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ...|.+++||.+.+|.....++++|++++. ++++++++++++|++++++
T Consensus       324 ~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          324 FLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             HHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            988875559999998655567899999976 7999999999999998864

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=100.00  E-value=5.1e-33  Score=267.68  Aligned_cols=349  Identities=13%  Similarity=0.033  Sum_probs=243.3

Q ss_pred             hcCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+  .+.++ .+|++++++.+.+.+.. ..|....+..+.+.++++++.+.++.+.++|++++|+++|++
T Consensus        47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~  125 (459)
T 4a6r_A           47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELP-FYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVD  125 (459)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence            446789999987  35554 57999999999887632 123333445678888999998888877889999999999999


Q ss_pred             HHHHHhcC--------CCCEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCC----CCCCCC-------
Q 015768          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD-------  151 (400)
Q Consensus       104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~~-------  151 (400)
                      .+++++.+        +++.|++..|+|+++.......+.             .+..+ +...    ..+ .|       
T Consensus       126 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~-~d~~~~~~~  203 (459)
T 4a6r_A          126 TMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHI-EQPWWYKHGKD-MTPDEFGVV  203 (459)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEE-CCCCHHHHCTT-CCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEe-CCCccccCCcc-cCHHHHHHH
Confidence            99999875        569999999999987755544321             22233 3211    111 24       


Q ss_pred             -HHHHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          152 -ADWLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       152 -~e~l~~~l~~-~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                       +++|++.+.. . ..+++|++..+++++|. +++.+++++|.++|++||+++|+||+|.++...+........+....+
T Consensus       204 ~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi  283 (459)
T 4a6r_A          204 AARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDL  283 (459)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred             HHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe
Confidence             7888888862 1 11355555544566666 569999999999999999999999999987655532211111111113


Q ss_pred             eccccccCCCcceeEEEEccCCcHHHHHHHH---HhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHH-HHHHHHHHHH
Q 015768          228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICASIISQHLALYSLQTG--PEWVTERV-KDLVRNREII  301 (400)
Q Consensus       228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~-~~~~~~~~~l  301 (400)
                      .++||+++.+|+|+||++.+   +++++.+.   ......+++.+++++.++.++|+..  ++..++.. +.....++.+
T Consensus       284 ~t~sK~l~gg~~~lg~v~~~---~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l  360 (459)
T 4a6r_A          284 FTAAKGLSSGYLPIGAVFVG---KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRW  360 (459)
T ss_dssp             EEECGGGGTTSSCCEEEEEC---HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHH
T ss_pred             eehhhhhcCCCCCccceeeC---HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence            36789997444999999998   88888887   3444567888999999999999742  22333333 3444445555


Q ss_pred             HHHhccCCCCcccCCCCceEEEeeCCCCCCC----------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768          302 REALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED  370 (400)
Q Consensus       302 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~  370 (400)
                      .+.|++++.+....+. +.++++.+.....+          ..+++..++ ++||.+.|+.     +++||+++. .+++
T Consensus       361 ~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~~~~~~t~e  433 (459)
T 4a6r_A          361 RETFSRFEHVDDVRGV-GMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFF-RNNLIMRACG-----DHIVSAPPLVMTRA  433 (459)
T ss_dssp             HHHHTTCTTEEEEEEE-TTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHH-HTTEECEEET-----TEEEECCCTTCCHH
T ss_pred             HHHHhcCCCeEEEEEE-EEEEEEEEecCccccccccchHHHHHHHHHHHH-HCCeEEecCC-----CEEEEECCCCCCHH
Confidence            5555666554455555 66666666432111          456777776 7899999853     899999776 7999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 015768          371 DCKAAADRLRRGLEELVK  388 (400)
Q Consensus       371 ~~~~~~~~l~~~l~~~~~  388 (400)
                      ++++++++|+++++++.+
T Consensus       434 ~i~~~l~~l~~~l~~~~~  451 (459)
T 4a6r_A          434 EVDEMLAVAERCLEEFEQ  451 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999998764

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=2.6e-34  Score=271.99  Aligned_cols=337  Identities=15%  Similarity=0.052  Sum_probs=228.8

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      ..++.|.|+.+.+. ++|+++++++.+.+.+..   ...|....+..+..+++.+++++.+|++++++++|+|+++|+..
T Consensus        17 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~   95 (400)
T 3vax_A           17 RGSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNI   95 (400)
T ss_dssp             -----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHH
T ss_pred             ccCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHH
Confidence            34556777666544 568999999988875311   11121222334566777777777779888999999999999999


Q ss_pred             HHHHhc----CCCC-EEEEeCCCccchhHHHHh---cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768          105 IVLTLC----DAGD-SVVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (400)
Q Consensus       105 ~~~~l~----~~gd-~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np  176 (400)
                      ++.++.    ++|| +|+++.++|+++...++.   .|++++.+ |.+++ +.+|++++++.+++++  ++|++++|+||
T Consensus        96 ~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~np  171 (400)
T 3vax_A           96 ALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFL-TPGPS-GRISVEGVMERLRPDT--LLVSLMHVNNE  171 (400)
T ss_dssp             HHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEE-CCCTT-CCCCHHHHHTTCCTTE--EEEECCSBCTT
T ss_pred             HHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEE-ccCCC-CCcCHHHHHHhcCCCc--eEEEEECCCCC
Confidence            999998    8999 999999999887765544   69999999 88764 4789999999998665  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE-ccCCcHHHH-
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFA-  254 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~-~~~~~~~~~-  254 (400)
                      ||.+.+   +++|.++|++||+++|+|++|+....   +...... .+++++|+||.+|.+|  +|+++ .++  +++. 
T Consensus       172 tG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~---~~~~~~~-~d~~~~s~~K~~g~~g--~g~~~~~~~--~~~~~  240 (400)
T 3vax_A          172 TGVIQP---VAELAQQLRATPTYLHVDAAQGYGKV---PGDLTTP-IDMISISGHKIGAPKG--VGALVTRRR--EEMDD  240 (400)
T ss_dssp             TCBBCC---HHHHHHHHTTSSCEEEEECTTTTTTS---GGGGGSC-CSEEEEETGGGTSCSS--CEEEEECBC--SSSTT
T ss_pred             ceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCC---CcChhhc-CcEEEEeHHHhCCCCc--eEEEEEecc--hhccc
Confidence            999999   88999999999999999999984322   1112222 6689999999776444  57766 663  1111 


Q ss_pred             --HHHHHhh-------ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEE
Q 015768          255 --TQLLKVQ-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYL  322 (400)
Q Consensus       255 --~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~  322 (400)
                        ..+....       .....+.+...+.++..+++...+++++..++++++++++.+.|+ .+++.+..+..   +.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~  319 (400)
T 3vax_A          241 ERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHIL  319 (400)
T ss_dssp             CBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEE
T ss_pred             cccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEE
Confidence              1111111       122445677777777677664334567888999999999999998 66656665543   3567


Q ss_pred             EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEe-cc-CCHHHHHHHHHHHHH
Q 015768          323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISF-GG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~-~~-~~~~~~~~~~~~l~~  381 (400)
                      ++.++.  .+.+++...|.  +||.+.+|..|..                   ++++||++ +. .+++++++++++|++
T Consensus       320 ~~~~~~--~~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~  395 (400)
T 3vax_A          320 NLSFED--VDAEAFLVTLK--DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK  395 (400)
T ss_dssp             EEECTT--CCHHHHHHHHH--HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred             EEEeCC--CCHHHHHHHHh--cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence            777764  36788888774  8999999875532                   48999999 76 789999999999998


Q ss_pred             HHHH
Q 015768          382 GLEE  385 (400)
Q Consensus       382 ~l~~  385 (400)
                      ++++
T Consensus       396 ~~~~  399 (400)
T 3vax_A          396 LKPS  399 (400)
T ss_dssp             ----
T ss_pred             Hhcc
Confidence            8764

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=100.00  E-value=2.3e-32  Score=255.99  Aligned_cols=335  Identities=10%  Similarity=0.006  Sum_probs=235.6

Q ss_pred             HHHHHHHH-hcCC-CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEe
Q 015768           19 MVQIQELV-RGAK-NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVT   95 (400)
Q Consensus        19 ~~~~~~~~-~~~~-~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~   95 (400)
                      +..+.... +.|. ++++++.+.++.+.++++++++.    .     |..   ...+++.+++.+++.+|. ++++++++
T Consensus        15 ~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~----~-----~~~---~~~~~~~~~~~~a~~~g~~~~~~~~~~   82 (374)
T 2aeu_A           15 RKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN----T-----YIG---SSYFAEKVNEYGLKHLGGDENDKCVGF   82 (374)
T ss_dssp             HHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT----S-----TTH---HHHHHHHHHHHHHHHHTCCTTEEEEEE
T ss_pred             HHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH----H-----hcC---chHHHHHHHHHHHHHhCCCCcceEEEE
Confidence            33455543 5666 88999998888888999999885    1     211   134567777777777787 35889999


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeE-EEEe
Q 015768           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL-VSVV  171 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~-v~l~  171 (400)
                      +|+++++..++.++  +||+|+++.|+|+++..   .++..|++++.+         .|++++++. +++  +++ |+++
T Consensus        83 ~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~--~~~~v~~~  148 (374)
T 2aeu_A           83 NRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDK--DTLVIITG  148 (374)
T ss_dssp             SSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCT--TEEEEEEC
T ss_pred             cChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCC--ccEEEEEc
Confidence            99999999999988  99999999998877554   667789888766         278889887 544  499 9999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  249 (400)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~  249 (400)
                      +|+||||.  +..++++|.++|++||+++|+|++|+.+..  .... .....+.+++++|+||+++  |+|+||++++  
T Consensus       149 ~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~di~~~S~sK~l~--g~~~G~~~~~--  221 (374)
T 2aeu_A          149 STMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQP-PALKLGADLVVTSTDKLME--GPRGGLLAGK--  221 (374)
T ss_dssp             BCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCC-CHHHHTCSEEEEETTSSSS--SCSCEEEEEE--
T ss_pred             cCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccC-CccccCCcEEEecCccccc--CcceEEEEEC--
Confidence            99999997  667799999999999999999999987742  1111 0112245688999999974  6899999988  


Q ss_pred             cHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHH----HHHHHHHhccCC---CCcc-cCCCCce
Q 015768          250 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRN----REIIREALSPLG---EGAV-KGGEGAI  320 (400)
Q Consensus       250 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~----~~~l~~~L~~~~---~~~~-~~~~~~~  320 (400)
                       +++++++.........+++++.+.++..+++.... ...+..+..+..    ++.+.+.|..+.   ++.+ ..+.+.+
T Consensus       222 -~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~  300 (374)
T 2aeu_A          222 -KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV  300 (374)
T ss_dssp             -HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred             -HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence             78888888766545556788888888888875322 222222222222    455566665541   2233 3455445


Q ss_pred             EEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccC-CCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHh
Q 015768          321 YLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG--LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       321 ~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +.|..++...  .+..+++.++++++||.+.||..|. .++++||+++.  ..+.+++.+++.|+++++++.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~  372 (374)
T 2aeu_A          301 IKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF  372 (374)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred             EEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            5555443210  0112366667778999999998763 46799999975  223347777777777777654

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=1.6e-33  Score=269.81  Aligned_cols=348  Identities=16%  Similarity=0.135  Sum_probs=245.1

Q ss_pred             hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~  102 (400)
                      .+|+.++||+.+..  +++ .+|++++++.+.+.+.  ..|+...+..+.++++++++.+.++... +++++++|+++|+
T Consensus        40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~  117 (439)
T 3dxv_A           40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDAN  117 (439)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHH
Confidence            35678999998875  454 7899999999998774  3354456678899999999999886655 7999999999999


Q ss_pred             HHHHHHh--cCCCCEEEEeCCCccchhHHHHhcCcE---------------EEEeccCCCCCCCC----CHHHHHHhhc-
Q 015768          103 VNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVT---------------HILVGPCSSKTLHP----DADWLEKTLE-  160 (400)
Q Consensus       103 ~~~~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~~~~~~----~~e~l~~~l~-  160 (400)
                      +.++.++  ..+++.|++.+++|++........+..               +..+ |.+......    |+++|++.++ 
T Consensus       118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~le~~l~~  196 (439)
T 3dxv_A          118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPD-PYRPYRNDPTGDAILTLLTEKLAA  196 (439)
T ss_dssp             HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCC-SSSCBTTBTTSHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHh
Confidence            9999986  235678999999998876555443322               1223 333221111    6899999983 


Q ss_pred             c-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          161 T-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       161 ~-~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      . ...+++|++++++|++|.+. +.+++++|.++|++||+++|+||+|+++...+........+....+.|+||.+| +|
T Consensus       197 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~-~G  275 (439)
T 3dxv_A          197 VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLG-GG  275 (439)
T ss_dssp             SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGG-TT
T ss_pred             cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhc-CC
Confidence            1 12247777777788888765 566699999999999999999999987655443222111111112238999998 79


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCccc
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVK  314 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~  314 (400)
                      +|+||++.+   +++++.+.......++ .+++.+.++.++++...+  +++.++++++.+++++.|++    ++.+...
T Consensus       276 ~riG~~~~~---~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  349 (439)
T 3dxv_A          276 LPLSAVIAP---AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR--DDLPAMAERKGRLLRDGLSELAKRHPLIGDI  349 (439)
T ss_dssp             SCCEEEEEE---HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             cceEEEEEC---HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence            999999998   7888777665555677 899999998888874221  33444555555555555544    4543444


Q ss_pred             CCCCceEEEeeCCC-------CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPE-------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       315 ~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+. +.++++.+..       ...+..++...++ ++||.+.|+..  .++++||+++. .+++++++++++|+++++++
T Consensus       350 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  425 (439)
T 3dxv_A          350 RGR-GLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLDRAFSEL  425 (439)
T ss_dssp             EEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred             EEE-EEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            444 6667666521       1112456777776 67999998753  25899999776 79999999999999999987


Q ss_pred             hc
Q 015768          387 VK  388 (400)
Q Consensus       387 ~~  388 (400)
                      .+
T Consensus       426 ~~  427 (439)
T 3dxv_A          426 SA  427 (439)
T ss_dssp             GG
T ss_pred             hc
Confidence            54

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=100.00  E-value=5.6e-33  Score=261.34  Aligned_cols=329  Identities=13%  Similarity=0.064  Sum_probs=240.3

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      ++.+.|..+  +.+.++++++++.+....    .+.+.  ....++++.++++++...+++++++++|+|+|++++.++.
T Consensus         4 ~~~~~~~p~--p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~   77 (385)
T 2bkw_A            4 SVDTLLIPG--PIILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFAS   77 (385)
T ss_dssp             CCCEECSSS--SCCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHH
T ss_pred             ccceeecCC--CcCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHH
Confidence            445566665  344568888877665432    12111  1245567777777766556667899999999999999999


Q ss_pred             Hhc---CCCCEEEEe-CCCccch-hHHHHhcCcEEEEeccC-CCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccC
Q 015768          108 TLC---DAGDSVVMF-APYYFNS-YMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       108 ~l~---~~gd~vlv~-~p~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~  180 (400)
                      ++.   ++||+|++. .+.|+.. ...++..|++++.+ |. ++ ++.+|++++++.+++ ++  ++|++++++||||.+
T Consensus        78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~  153 (385)
T 2bkw_A           78 NFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVV-RPLKI-GESVPLELITEKLSQNSY--GAVTVTHVDTSTAVL  153 (385)
T ss_dssp             HHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEE-CCSST-TSCCCHHHHHHHHHHSCC--SEEEEESEETTTTEE
T ss_pred             HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEE-ecCCC-CCCCCHHHHHHHHhcCCC--CEEEEEccCCCcCeE
Confidence            998   899999888 5555555 36778889999999 88 54 456899999999976 44  999999999999999


Q ss_pred             CCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHH-H
Q 015768          181 IPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFAT-Q  256 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~-~  256 (400)
                      .|   +++|.++|++|  |+++|+|++|+...   .+......+.+++++|+||+++ ++|  +||++.+   ++.++ +
T Consensus       154 ~~---l~~i~~~~~~~~~~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~---~~~~~~~  222 (385)
T 2bkw_A          154 SD---LKAISQAIKQTSPETFFVVDAVCSIGC---EEFEFDEWGVDFALTASQKAIGAPAG--LSISLCS---SRFMDYA  222 (385)
T ss_dssp             CC---HHHHHHHHHHHCTTSEEEEECTTTTTT---SCCCTTTTTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHHH
T ss_pred             cC---HHHHHHHHHhhCCCCEEEEECccccCC---ccccccccCceEEEecCccccccCCc--ceEEEEc---HHHHHHH
Confidence            99   88999999999  99999999998432   1222222356789999999774 345  5999988   55554 3


Q ss_pred             HH----------------------Hhhc---cCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHh-ccCC
Q 015768          257 LL----------------------KVQD---NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREAL-SPLG  309 (400)
Q Consensus       257 l~----------------------~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L-~~~~  309 (400)
                      +.                      ....   ....+.+...+.++..+++...++ +++..++++++++++.+.| ++++
T Consensus       223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g  302 (385)
T 2bkw_A          223 LNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ  302 (385)
T ss_dssp             TCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            31                      1111   012456777777777777642233 5677888899999999999 8874


Q ss_pred             CCcccCC-----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-CCCeEEEE-ec----cCCHHHHHHHHHH
Q 015768          310 EGAVKGG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRIS-FG----GLVEDDCKAAADR  378 (400)
Q Consensus       310 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~-~~----~~~~~~~~~~~~~  378 (400)
                       +.+..+     ..++++++.++.    ..++..+|. ++||.+.+|..+. .++++|++ ++    .++++++++++++
T Consensus       303 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~  376 (385)
T 2bkw_A          303 -LTSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLK-SHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDL  376 (385)
T ss_dssp             -CEESSCSSSTTBCSSCEEEECSC----HHHHHHHHH-HTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHH
T ss_pred             -ceecccCcccccCCceEEEecCC----HHHHHHHHH-HCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHH
Confidence             455532     247788888863    677888775 7899999987653 46799999 76    2589999999999


Q ss_pred             HHHHHHH
Q 015768          379 LRRGLEE  385 (400)
Q Consensus       379 l~~~l~~  385 (400)
                      |++++++
T Consensus       377 l~~~~~~  383 (385)
T 2bkw_A          377 IKLALQR  383 (385)
T ss_dssp             HHHHTTC
T ss_pred             HHHHHHh
Confidence            9988754

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=100.00  E-value=1.2e-33  Score=270.31  Aligned_cols=346  Identities=13%  Similarity=0.125  Sum_probs=241.3

Q ss_pred             cCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++.++||+.+..  +++ .+|++++++.+.+.+...  + ...+..+.+.++++.+.+.++.++++|++++|+++|++.
T Consensus        41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~  117 (433)
T 1zod_A           41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDH--L-FSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEA  117 (433)
T ss_dssp             TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCC--C-CTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHH
T ss_pred             CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcc--c-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHH
Confidence            4677889977763  444 589999999998865321  1 112234566777777777778778999999999999999


Q ss_pred             HHHHhc--CCCCEEEEeCCCccchhHHHHhc--------------CcEEEEeccCCCC-CCC--------CCHHHHHHhh
Q 015768          105 IVLTLC--DAGDSVVMFAPYYFNSYMSFQMT--------------GVTHILVGPCSSK-TLH--------PDADWLEKTL  159 (400)
Q Consensus       105 ~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~--------------g~~~~~~~~~~~~-~~~--------~~~e~l~~~l  159 (400)
                      +++++.  ..+++|++.+|+|++........              |+..+.+ |.... .+.        +|++.+++.+
T Consensus       118 a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~d~~~le~~l  196 (433)
T 1zod_A          118 AIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPA-PFTYRPRFERNGAYDYLAELDYAFDLI  196 (433)
T ss_dssp             HHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECC-CCTTSCCCEETTEECHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecC-CcccccccCCchhhhHHHHHHHHHHHH
Confidence            998764  34589999999998866543321              3444333 22110 111        3589999988


Q ss_pred             ccC--CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC
Q 015768          160 ETK--PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       160 ~~~--~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g  235 (400)
                      +..  ..+++|+ ++| +||+|. +++.+++++|.++|++||+++|+||+|+++...+........+....+.|+||.+|
T Consensus       197 ~~~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~  275 (433)
T 1zod_A          197 DRQSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG  275 (433)
T ss_dssp             HHHCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH
T ss_pred             HhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEeccccc
Confidence            731  2235555 455 688996 67899999999999999999999999997765443221111111122348899998


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----C
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----G  309 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~  309 (400)
                       +|+|+||++.+   +++++.+....  ...+++.+++++.++.++++...+  ....++++++++++++.|+++    +
T Consensus       276 -~G~~ig~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~  349 (433)
T 1zod_A          276 -AGLPLAAIVTS---AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLRRGLLDLMERFD  349 (433)
T ss_dssp             -TTSSCEEEEEC---HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             -CCCCeeEEEEh---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence             59999999998   78888887633  225777899999988888864211  234566666777777776653    4


Q ss_pred             CCcccCCCCceEEEeeCCCC-------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          310 EGAVKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      .+....+. +.++|+.++..       ..+..++...++ ++||.+.||..|+.++++||+++. .+++++++++++|++
T Consensus       350 ~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~  427 (433)
T 1zod_A          350 CIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ  427 (433)
T ss_dssp             TEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence            33334444 67778877531       112567888776 789999998876556899998775 799999999999999


Q ss_pred             HHHHH
Q 015768          382 GLEEL  386 (400)
Q Consensus       382 ~l~~~  386 (400)
                      +++++
T Consensus       428 ~l~~~  432 (433)
T 1zod_A          428 AIERA  432 (433)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98764

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=3.9e-33  Score=265.43  Aligned_cols=333  Identities=16%  Similarity=0.122  Sum_probs=243.7

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  ++++ .+|++++++.+.+.+...  ++ .....+.++++++.+.+..|  .+++++++|+++|++
T Consensus        54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~  128 (420)
T 2pb2_A           54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWH--TS-NVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANE  128 (420)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCC--CC-TTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhccc--cc-CccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHH
Confidence            3567899998874  3443 689999999999876421  11 11234667777777777766  589999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEeCCCccchhH-HHHhcCcE------------EEEeccCCCCCCCCCHHHHHHhhccC
Q 015768          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETK  162 (400)
Q Consensus       104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~~~e~l~~~l~~~  162 (400)
                      .++.++..       +| ++|++.+|+|++... .+...|..            +..+ |.      .|+++|++.++++
T Consensus       129 ~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~------~d~~~le~~i~~~  201 (420)
T 2pb2_A          129 TAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHV-PF------NDLHAVKAVMDDH  201 (420)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEE-CT------TCHHHHHHHCCTT
T ss_pred             HHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEe-cC------CCHHHHHHHhccC
Confidence            99998875       67 599999999988654 34444532            4444 32      2799999999764


Q ss_pred             CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcc
Q 015768          163 PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~  239 (400)
                        +++|++++++|++|. +++.+++++|.++|++||+++|+||+|.++...+....  ......+++  |+||.+| +|+
T Consensus       202 --~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~-~G~  276 (420)
T 2pb2_A          202 --TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALG-GGF  276 (420)
T ss_dssp             --EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTS
T ss_pred             --ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccccc-CCC
Confidence              489988888888884 68999999999999999999999999987765443221  111122333  7899998 899


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccC
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG  315 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~  315 (400)
                      |+||++.+   +++++.+.......+++.+++.+.++.++|+...+  ++..++++++++++.+.|+++    +.+....
T Consensus       277 ~iG~~~~~---~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  351 (420)
T 2pb2_A          277 PVSAMLTT---QEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIR  351 (420)
T ss_dssp             CCEEEEEC---HHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             ceEEEEEh---HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            99999998   66766655433445778899999998888874222  356677778888888877764    3322334


Q ss_pred             CCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          316 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +. +.++++.++... .+..++...|. ++||.+.++.    ++++||+++. .+++++++++++|+++++++.
T Consensus       352 ~~-g~~~~v~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~~  419 (420)
T 2pb2_A          352 GM-GLLIGAELKPKYKGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKVV  419 (420)
T ss_dssp             EE-TTEEEEEECGGGTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ec-ceEEEEEECCCchHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            44 677788876421 24678888886 6999999864    6899999775 799999999999999988753

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=100.00  E-value=3.4e-32  Score=256.47  Aligned_cols=322  Identities=13%  Similarity=0.127  Sum_probs=237.3

Q ss_pred             CCCCCCC-c---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCC
Q 015768           38 GVVYWQP-P---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDA  112 (400)
Q Consensus        38 ~~~~~~~-~---~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~  112 (400)
                      ++++++. |   +++++++.+.+.++. ..|.+..+..++++++++++    |.+ +.|++++ ||+|++.++.++ .++
T Consensus         5 ~~p~f~~~p~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~----~~~-~~i~~~s-Gt~al~~~l~~l~~~~   77 (388)
T 1b9h_A            5 KAPEFPAWPQYDDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHH----GAA-HALAVTN-GTHALELALQVMGVGP   77 (388)
T ss_dssp             CCCCCCCSSCCCHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHT----TCS-EEEEESC-HHHHHHHHHHHTTCCT
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHh----CCC-eEEEeCC-HHHHHHHHHHHcCCCC
Confidence            4566765 5   899999999987642 34656677888999999987    443 4555555 589999999999 899


Q ss_pred             CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       113 gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      ||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++  ++|+   |+||||.+.+   +++|.++
T Consensus        78 gd~Vi~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~n~tG~~~~---l~~i~~l  148 (388)
T 1b9h_A           78 GTEVIVPAFTFISSSQAAQRLGAVTVPV-DVDAATYNLDPEAVAAAVTPRT--KVIM---PVHMAGLMAD---MDALAKI  148 (388)
T ss_dssp             TCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEEC---CBCGGGCCCC---HHHHHHH
T ss_pred             cCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCccCcCC---HHHHHHH
Confidence            9999999999999999999999999999 8887667889999999997654  7766   8999999998   8999999


Q ss_pred             HHHcCCEEEEcccccccc-cCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH--HHHHHHhhcc------
Q 015768          193 CKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--ATQLLKVQDN------  263 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~--~~~l~~~~~~------  263 (400)
                      |++||+++|+|++|+.+. +.+.....  .+ ++++.||||..+++|.++||++.++  +.+  ++.+......      
T Consensus       149 a~~~~~~li~D~a~~~g~~~~~~~~~~--~~-~i~~~S~s~~K~l~g~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~  223 (388)
T 1b9h_A          149 SADTGVPLLQDAAHAHGARWQGKRVGE--LD-SIATFSFQNGKLMTAGEGGAVVFPD--GETEKYETAFLRHSCGRPRDD  223 (388)
T ss_dssp             HHHHTCCBCEECTTCTTCEETTEEGGG--SS-SCEEEECCTTSSSCSSSCEEEEECT--TCHHHHHHHHHHTBTTCCTTC
T ss_pred             HHHcCCEEEEecchhcCCccCCeeccc--cc-ceEEEEccCCCcccCCCeEEEEECC--HHHHHHHHHHHHHhCCCCccC
Confidence            999999999999998643 33222111  11 4677787744444566899999884  335  5555433221      


Q ss_pred             ---------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC------CCCceEEEeeCCC
Q 015768          264 ---------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG------GEGAIYLWARLPE  328 (400)
Q Consensus       264 ---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~------~~~~~~~~~~~~~  328 (400)
                               .++..+.+...++...++    ++++..++++++++++.+.|++++++.+..      +.+++++|+.++.
T Consensus       224 ~~~~~~~~g~~~~~~~~~~a~~~~~~~----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (388)
T 1b9h_A          224 RRYFHKIAGSNMRLNEFSASVLRAQLA----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPG  299 (388)
T ss_dssp             SSCCCCSCCCBCBCBHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTT
T ss_pred             ccceeecccccCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCC
Confidence                     112245454444433333    356777888889999999999886555554      3447899999975


Q ss_pred             CC-CCHHHHHHHHHHhcCeEEeCCCccC--C---------------------------CCeEEEEecc-C-CHHHHHHHH
Q 015768          329 KH-LDDFEVVRWLAHRHGVVVIPGGACG--C---------------------------RGHLRISFGG-L-VEDDCKAAA  376 (400)
Q Consensus       329 ~~-~~~~~~~~~l~~~~gi~v~~g~~~~--~---------------------------~~~iRi~~~~-~-~~~~~~~~~  376 (400)
                      .. .+.+++...|. ++||.+.++....  .                           .+.+||+++. + |++|++.++
T Consensus       300 ~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~  378 (388)
T 1b9h_A          300 LTEERRNALVDRLV-EAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATA  378 (388)
T ss_dssp             CCHHHHHHHHHHHH-HTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHH
T ss_pred             cCcccHHHHHHHHH-HCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHH
Confidence            21 14567888776 7899998765321  0                           1359999987 8 899999999


Q ss_pred             HHHHHHHHH
Q 015768          377 DRLRRGLEE  385 (400)
Q Consensus       377 ~~l~~~l~~  385 (400)
                      +.|++++++
T Consensus       379 ~~l~~~~~~  387 (388)
T 1b9h_A          379 EIIADAVAR  387 (388)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            999998764

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=100.00  E-value=1.8e-33  Score=268.92  Aligned_cols=339  Identities=13%  Similarity=0.076  Sum_probs=224.9

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .++.+.|+.+.+. ++|+.+++++.+.+.+.  ..|+..     .+..+..+.+.+.+++.+|++++++++|+|+++++.
T Consensus        16 ~~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~   92 (432)
T 3a9z_A           16 PNRKVYMDYNATT-PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNN   92 (432)
T ss_dssp             --CCEECBTTTCC-CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHH
T ss_pred             CCCcEEeeCCccC-CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHH
Confidence            3577888888766 67899999999887642  222211     112223344444455555888889999999999999


Q ss_pred             HHHHHhc--------CCCCEEEEeCCCccch-----------------hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768          104 NIVLTLC--------DAGDSVVMFAPYYFNS-----------------YMSFQMTGVTHILVGPCSSKTLHPDADWLEKT  158 (400)
Q Consensus       104 ~~~~~l~--------~~gd~vlv~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~  158 (400)
                      .++.++.        ++||+|+++.|+|+++                 ....+..|++++.+ |.+++++.+|++.|++.
T Consensus        93 ~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~  171 (432)
T 3a9z_A           93 LVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFV-PVSKVNGQVEVEDILAA  171 (432)
T ss_dssp             HHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEE-CCCTTTSSCCHHHHHHT
T ss_pred             HHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEE-ecCcccCCcCHHHHHHh
Confidence            9999986        5899999999999764                 23334578999999 88763457899999999


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC----------CEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG----------SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       159 l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~----------~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      +++++  ++|++++|+||||.++|   +++|.++|+++|          +++|+|++|+.+..   +......+.++++.
T Consensus       172 i~~~~--~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~---~~~~~~~~~d~~~~  243 (432)
T 3a9z_A          172 VRPTT--CLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR---RVDVEDLGVDFLTI  243 (432)
T ss_dssp             CCTTE--EEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS---CCCHHHHCCSEEEE
T ss_pred             ccCCc--eEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc---ccChhhcCCCEEEE
Confidence            98654  99999999999999999   778889999999          99999999975421   11111123457789


Q ss_pred             ccccccCCCcceeEEEEccCCcHHH-HHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMGWRVGYIAYPSEVEGF-ATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~~~~~~-~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      |+||++|   .++||++.++   +. ...+...       .....++.+.+.+.++..+++...+++++..+++.+++++
T Consensus       244 s~~K~~g---~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~  317 (432)
T 3a9z_A          244 VGHKFYG---PRIGALYVRG---VGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDY  317 (432)
T ss_dssp             EGGGTTC---CSCEEEEETT---BTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ehhHhcC---CcceEEEEcc---ccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            9999875   4589999884   22 2222211       1122355677777777777764345677888889999999


Q ss_pred             HHHHhccCCCCcc--cCC-----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-----------------
Q 015768          301 IREALSPLGEGAV--KGG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-----------------  356 (400)
Q Consensus       301 l~~~L~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----------------  356 (400)
                      +.+.|+++.+..+  ..+     ..+..+++.++....+..++...+   .++.+..|..|..                 
T Consensus       318 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~  394 (432)
T 3a9z_A          318 LEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPV  394 (432)
T ss_dssp             HHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCH
T ss_pred             HHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCc
Confidence            9999987532222  122     123345555553222455555533   3777777754421                 


Q ss_pred             ---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          357 ---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       357 ---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                         .+++||+++. ++++++++++++|+++++++.+
T Consensus       395 ~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~  430 (432)
T 3a9z_A          395 DVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG  430 (432)
T ss_dssp             HHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence               3789999997 6899999999999999987643

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-33  Score=271.53  Aligned_cols=349  Identities=10%  Similarity=0.020  Sum_probs=239.8

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+.  ..|+...+..+.+.++++++.+.++.. .+++++|+|+++|+
T Consensus        61 ~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~  138 (453)
T 4ffc_A           61 ADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAV  138 (453)
T ss_dssp             TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred             CCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHH
Confidence            3467899999874  5554 5899999999988763  234444456678888888888887654 58999999999999


Q ss_pred             HHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc--------------EEEEeccCCC---CCCCCC--------HHHH
Q 015768          103 VNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS---KTLHPD--------ADWL  155 (400)
Q Consensus       103 ~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~---~~~~~~--------~e~l  155 (400)
                      +.+++.+..  .++.|++.+++|++........+.              .+..+ |.+.   +.+..+        ++.+
T Consensus       139 ~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~l  217 (453)
T 4ffc_A          139 ENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRM-PASYPLRDEPGLTGEEAARRAISRI  217 (453)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccCccccchHHHHHHHHHHH
Confidence            999987753  458999999999987765543321              23334 4321   111112        3555


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCc--cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768          156 EKTLETKPTPKLVSVVNPGNPSG--TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA  233 (400)
Q Consensus       156 ~~~l~~~~~~~~v~l~~p~nptG--~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~  233 (400)
                      ++.+..++  .+++++.|.|++|  ...+.+++++|.++|++||+++|+||+|.++...+........+....+.++||.
T Consensus       218 ~~~i~~~~--~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~  295 (453)
T 4ffc_A          218 ETQIGAQS--LAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKG  295 (453)
T ss_dssp             HHHTCGGG--EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGG
T ss_pred             HHhcCCCC--EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhh
Confidence            55554433  5555666766655  4568889999999999999999999999987654432211111222224578999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      ++ +|+|+||++++   +++++.+.......+++.+++++.++.++|+...  +..++..+.....++.+.+.++.++.+
T Consensus       296 ~~-~G~~~G~~~~~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  371 (453)
T 4ffc_A          296 IA-GGMPLSAVTGR---AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDII  371 (453)
T ss_dssp             GG-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred             hc-CCcCeEEEEEC---HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence            98 58999999998   7888877766667788999999999999887421  223333333333344444444445543


Q ss_pred             cccCCCCceEEEeeCCCC------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEK------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      ....+. +.++++.+...      .....++...++ ++||.+.|+..+  ++++||+++. .+++++++++++|+++++
T Consensus       372 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~  447 (453)
T 4ffc_A          372 GEVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEAL-SQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIR  447 (453)
T ss_dssp             EEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            444444 66777766320      012456777665 789999987643  4789999886 799999999999999998


Q ss_pred             HHhc
Q 015768          385 ELVK  388 (400)
Q Consensus       385 ~~~~  388 (400)
                      ++.+
T Consensus       448 ~~~~  451 (453)
T 4ffc_A          448 AKAS  451 (453)
T ss_dssp             HHC-
T ss_pred             HHHh
Confidence            8653

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=2.1e-32  Score=255.15  Aligned_cols=327  Identities=11%  Similarity=0.034  Sum_probs=241.8

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHh
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      +.+.|..+  +.+.|+++++++.+.+.++....+.......++.+++.+++++.+|.+ ++++++|+|+|++++.++.++
T Consensus         4 ~~~~~~p~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l   81 (362)
T 3ffr_A            4 NKIYFTPG--PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNC   81 (362)
T ss_dssp             CCEEECSS--SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHH
T ss_pred             cceeccCC--CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhc
Confidence            34555544  345678999888888776531111123334467778888888888874 688999999999999999999


Q ss_pred             cCCCCEEEEeCCCcc-chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          110 CDAGDSVVMFAPYYF-NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      .++ +.+++..+.|. .+...++..|++++.+ +.+++ +.+|+++++  +++++  ++|++++|+||||.++|   +++
T Consensus        82 ~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~--~~~~~--~~v~~~~~~nptG~~~~---l~~  151 (362)
T 3ffr_A           82 VEK-KSFHCVNGSFSKRFYEFAGELGREAYKE-EAAFG-KGFYPADIT--VPADA--EIICLTHNETSSGVSMP---VED  151 (362)
T ss_dssp             CSS-EEEEEECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCGGGCC--CCTTC--CEEEEESEETTTTEECC---HHH
T ss_pred             cCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEE-ecCCC-CCCCHHHHh--ccCCc--cEEEEEcCCCCcceeCC---HHH
Confidence            988 44555555554 2335667789999999 77644 478999988  55554  99999999999999999   888


Q ss_pred             HHHHHHHc-CCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc----
Q 015768          189 ISDLCKAA-GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD----  262 (400)
Q Consensus       189 i~~l~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~----  262 (400)
                      |.++|++| |+++|+|++|+.+...   ...  ...+++++|+||+++ ++|  +|+++.+   +++++++.....    
T Consensus       152 i~~la~~~p~~~li~D~a~~~~~~~---~~~--~~~d~~~~s~~K~~~~~~G--~g~~~~~---~~~~~~~~~~~~gg~~  221 (362)
T 3ffr_A          152 INTFRDKNKDALIFVDAVSSLPYPK---FDW--TKIDSVFFSVQKCFGLPAG--LGVWILN---DRVIEKSKALLAKRKS  221 (362)
T ss_dssp             HTTSGGGSTTSEEEEECTTTTTSSC---CCT--TSCSEEEEETTSTTCCCSC--CEEEEEE---HHHHHHHHHHHHTTCC
T ss_pred             HHHHHHhCCCCEEEEecccccCCcc---cCh--hHCcEEEEecccccCCCCc--eEEEEEC---HHHHHHhhhccccCCC
Confidence            99999999 9999999998854321   111  125688999999997 566  5778777   677777665432    


Q ss_pred             -----------------cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCce
Q 015768          263 -----------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAI  320 (400)
Q Consensus       263 -----------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~  320 (400)
                                       ....+++...+.++..+++... ..++++.+++.++++++.+.|++++++.+..+    ....
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~  301 (362)
T 3ffr_A          222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMT  301 (362)
T ss_dssp             CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSS
T ss_pred             CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCc
Confidence                             1145667777777766665211 22578888899999999999999866455442    2356


Q ss_pred             EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      ++++.++.   +..++.+.|. ++||.+.+|..+..++++|++++. ++++++++++++|++++
T Consensus       302 ~~~~~~~~---~~~~~~~~l~-~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          302 TIVANTTM---LPGEINKILE-PFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             EEEEEESS---CHHHHHHHHG-GGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred             eEEEecCC---CHHHHHHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            77888875   6788888886 669999999777678999999987 78999999999888753

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=100.00  E-value=8.7e-33  Score=261.46  Aligned_cols=327  Identities=15%  Similarity=0.152  Sum_probs=246.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .++++|+.+.++++  +++++++.+.+...   .|.+..+..++++++++++    +.  +++++++++++++..++.++
T Consensus        30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~----~~--~~~v~~~~Gt~a~~~~l~~~   98 (399)
T 2oga_A           30 VPFLDLKAAYEELR--AETDAAIARVLDSG---RYLLGPELEGFEAEFAAYC----ET--DHAVGVNSGMDALQLALRGL   98 (399)
T ss_dssp             BCSCCHHHHHHHTH--HHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHT----TS--SEEEEESCHHHHHHHHHHHT
T ss_pred             CcccccCcCCCCCC--HHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHH----CC--CeEEEecCHHHHHHHHHHHh
Confidence            57889988877654  88999998887642   4655566778888888876    44  36788888999999999999


Q ss_pred             -cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 -~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                       .++||+|+++.|+|+++...++..|++++.+ |.+++++.+|++.+++.+++++  ++|+   ++||||.+.+   +++
T Consensus        99 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~n~tG~~~~---l~~  169 (399)
T 2oga_A           99 GIGPGDEVIVPSHTYIASWLAVSATGATPVPV-EPHEDHPTLDPLLVEKAITPRT--RALL---PVHLYGHPAD---MDA  169 (399)
T ss_dssp             TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCSSSSSBCHHHHHHHCCTTE--EEEC---CBCGGGCCCC---HHH
T ss_pred             CCCCcCEEEECCCccHHHHHHHHHCCCEEEEE-ecCCCCCCcCHHHHHHhcCCCC--eEEE---EeCCcCCccC---HHH
Confidence             8999999999999999999999999999999 8876566789999999997644  7776   5789999999   899


Q ss_pred             HHHHHHHcCCEEEEcccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--  263 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--  263 (400)
                      |.++|+++|+++|+|++|+.+. +.+...   ..-.++++.|+  ||++|.+| ++||++.++  +++.+++......  
T Consensus       170 i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~di~~~S~~~sK~~~~~G-~~g~~~~~~--~~~~~~l~~~~~~g~  243 (399)
T 2oga_A          170 LRELADRHGLHIVEDAAQAHGARYRGRRI---GAGSSVAAFSFYPGKNLGCFG-DGGAVVTGD--PELAERLRMLRNYGS  243 (399)
T ss_dssp             HHHHHHHHTCEECEECTTCTTCEETTEET---TCTTCEEEEECCTTSSSCCSS-CCEEEEESC--HHHHHHHHHHHBTTC
T ss_pred             HHHHHHHcCCEEEEECcccccCccCCeec---ccccCEEEEeCCCCccCCcCC-ceEEEEeCC--HHHHHHHHHHHhcCc
Confidence            9999999999999999998653 332211   11135888898  79998668 899998865  6787777665432  


Q ss_pred             ----------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCCCC
Q 015768          264 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLD  332 (400)
Q Consensus       264 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~  332 (400)
                                .++..+.+...++..+++.    +++..++.+++++++.+.|++++++.+. .+..+.++|+.++....+
T Consensus       244 ~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~  319 (399)
T 2oga_A          244 RQKYSHETKGTNSRLDEMQAAVLRIRLAH----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTER  319 (399)
T ss_dssp             SSTTCCCSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSS
T ss_pred             cccccccccccCCCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCC
Confidence                      1235577777777667754    3455666777888999999987654543 233355554332211125


Q ss_pred             HHHHHHHHHHhcCeEEeCCCcc-----------C-----C-------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          333 DFEVVRWLAHRHGVVVIPGGAC-----------G-----C-------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~-----------~-----~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ..++...|. ++||.+.++...           +     .       .+++||+++. ++++|++.+++.|+++++++.
T Consensus       320 ~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~  397 (399)
T 2oga_A          320 RDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD  397 (399)
T ss_dssp             HHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHH-HCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            778888775 789999875421           0     0       2579999986 899999999999999987643

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=100.00  E-value=1.2e-32  Score=266.08  Aligned_cols=362  Identities=17%  Similarity=0.156  Sum_probs=262.2

Q ss_pred             HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHH
Q 015768            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKL   81 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l   81 (400)
                      ++++.......+..+.+..+.+.+.|+|..+.+.  .|+.|++++.+.+.+....+      |+.....+++++.+.+++
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~   99 (483)
T 1rv3_A           22 AQPLKDSDAEVYDIIKKESNRQRVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRA   99 (483)
T ss_dssp             TSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHH
Confidence            3455555666777777776666788999877653  57999999999887642112      333334567888888999


Q ss_pred             HhhcCCCCCc----EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH--------HHhcC--cEEEEeccCCCCC
Q 015768           82 NQENKLYKSS----VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS--------FQMTG--VTHILVGPCSSKT  147 (400)
Q Consensus        82 ~~~~~~~~~~----i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~--------~~~~g--~~~~~~~~~~~~~  147 (400)
                      ++.+|+++++    |++++|+ +++..++.++++|||+|++++++|.++...        ++..|  +.++.+ +.++++
T Consensus       100 a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~-~~~~~~  177 (483)
T 1rv3_A          100 LQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY-KVNPDT  177 (483)
T ss_dssp             HHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE-CBCTTT
T ss_pred             HHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEEC-ccccCC
Confidence            9999988643    7777766 899998999999999999999999887642        23334  566666 667566


Q ss_pred             CCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCCCccccCCCcEE
Q 015768          148 LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVV  225 (400)
Q Consensus       148 ~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i  225 (400)
                      +.+|+++|++.++ .++  |+|++ +++|++ .++|   +++|.++|+++|+++|+|++|+... ..+...... ...++
T Consensus       178 ~~iD~d~le~~i~~~~t--klIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~-~~~di  249 (483)
T 1rv3_A          178 GYIDYDRLEENARLFHP--KLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF-EHCHV  249 (483)
T ss_dssp             CSBCHHHHHHHHHHHCC--SEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG-GTCSE
T ss_pred             CcCCHHHHHHHHhhcCC--cEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC-CCCcE
Confidence            7899999999998 665  99998 888888 8889   8999999999999999999987333 323221111 14568


Q ss_pred             EEeccccccCCCcceeEEEEccCCcH------------HHHHHHHHhhc-cCCcCccHHHHHHHHHHhcC-CcHHHHHHH
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQD-NIPICASIISQHLALYSLQT-GPEWVTERV  291 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~~~~~------------~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~  291 (400)
                      +++|+||++  .|+|.||+++++...            ++.+.+..... ....+++...+.++..++.. ...+++++.
T Consensus       250 v~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~  327 (483)
T 1rv3_A          250 VTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ  327 (483)
T ss_dssp             EEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             EEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence            899999988  477889999885311            24444443221 12334455555555556653 235678889


Q ss_pred             HHHHHHHHHHHHHhccCCCCcccCCC-CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCccC-CCCeEEEEec
Q 015768          292 KDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGACG-CRGHLRISFG  365 (400)
Q Consensus       292 ~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~-~~~~iRi~~~  365 (400)
                      +++.++++++.+.|++++. .+..+. ...++++.++....+..++...| ++.||.+.    ||..+. .++++||+++
T Consensus       328 ~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L-~~~gI~v~~~~~pg~~~~~~~~~iRis~~  405 (483)
T 1rv3_A          328 RQVVANCRALSAALVELGY-KIVTGGSDNHLILVDLRSKGTDGGRAEKVL-EACSIACNKNTCPGDKSALRPSGLRLGTP  405 (483)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEEGGGGTCCHHHHHHHH-HHTTEECEEECCSSCSCTTSCCEEEEECH
T ss_pred             HHHHHHHHHHHHHHHhcCC-EeccCCCCCceEEEeccCCCCCHHHHHHHH-HhCCcEEecCCCCCCCcCCCCceEEeecC
Confidence            9999999999999998854 555442 34677888864334677776655 58999999    876432 4679999998


Q ss_pred             c-CC----HHHHHHHHHHHHHHHHH
Q 015768          366 G-LV----EDDCKAAADRLRRGLEE  385 (400)
Q Consensus       366 ~-~~----~~~~~~~~~~l~~~l~~  385 (400)
                      . ++    ++|++++++.|.+++..
T Consensus       406 ~~~t~g~~~edi~~~~~~l~~~l~~  430 (483)
T 1rv3_A          406 ALTSRGLLEKDFQKVAHFIHRGIEL  430 (483)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHh
Confidence            5 45    89999999999999976

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=4.1e-33  Score=263.36  Aligned_cols=335  Identities=12%  Similarity=0.077  Sum_probs=241.0

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++.+++|+.+.  ++++ +|+.+++++.+.+.+...  ++. .......+++++.+++.++++++++++++|+++|+..
T Consensus        43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~  119 (395)
T 1vef_A           43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA--MPQ-TLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEA  119 (395)
T ss_dssp             TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC--CCT-TSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCC--Ccc-ccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHH
Confidence            456789998876  5565 889999999998865321  111 1123556667777777777778999999999999999


Q ss_pred             HHHHhc--CCCCEEEEeCCCccchh-HHHHhcCcEEEE---eccCCCCC---CCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768          105 IVLTLC--DAGDSVVMFAPYYFNSY-MSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus       105 ~~~~l~--~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~---~~~~~~~~---~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                      ++.++.  .+||.|++.+|+|++.. ..++..|...+.   + |...+.   ...|++++++.+++++  ++|++++++|
T Consensus       120 al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~-p~~~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~~~~  196 (395)
T 1vef_A          120 ALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFL-PLVEPVEFIPYNDVEALKRAVDEET--AAVILEPVQG  196 (395)
T ss_dssp             HHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGC-SCSSCEEEECTTCHHHHHHHCCTTE--EEEEECSEET
T ss_pred             HHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccC-CCCCCeeEeCCCcHHHHHHHhccCE--EEEEEeCccC
Confidence            998874  57899999999997654 456656654210   1 211110   0138999999997544  8887766688


Q ss_pred             CCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768          176 PSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  252 (400)
Q Consensus       176 ptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~  252 (400)
                      |||.+ .+.+++++|.++|++||+++|+||+|+++...+....  ......+++  |+||+++ +|+|+||++.+   ++
T Consensus       197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~g~~~G~~~~~---~~  270 (395)
T 1vef_A          197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALG-GGVPLGVAVMR---EE  270 (395)
T ss_dssp             TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-TTSSCEEEEEE---HH
T ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEccccc-CCCceEEEEeh---HH
Confidence            99976 4788899999999999999999999996544332211  111122333  8899998 58999999998   66


Q ss_pred             HHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCCC
Q 015768          253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHL  331 (400)
Q Consensus       253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~  331 (400)
                      +++.+.......+++++++.+.++..+++...+  .+..++++++++++.+.|++++...+ ..+..++++|+.++.   
T Consensus       271 ~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~---  345 (395)
T 1vef_A          271 VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE---  345 (395)
T ss_dssp             HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS---
T ss_pred             HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC---
Confidence            766665433345667888888888888874221  34677788889999999988764111 112236788888874   


Q ss_pred             CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       332 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +..++..+|.+++||.+.++    .++++||+++. .+++++++++++|++++
T Consensus       346 ~~~~l~~~l~~~~gi~v~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          346 KAAPYIARLEKEHRVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             CSHHHHHHHHHHHCEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            35678887764789999985    36899999875 79999999999999875

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=100.00  E-value=5.4e-33  Score=267.14  Aligned_cols=347  Identities=12%  Similarity=0.055  Sum_probs=239.8

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+...   ....+..+.+.++++++.+.++.+.+ +++|+|+++|++
T Consensus        46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~  121 (452)
T 3n5m_A           46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANE  121 (452)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHH
Confidence            4568899999884  4454 589999999999876422   22345567888888888888776656 999999999999


Q ss_pred             HHHHHhc-----C---CCCEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCC-CCC-CC---------
Q 015768          104 NIVLTLC-----D---AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-TLH-PD---------  151 (400)
Q Consensus       104 ~~~~~l~-----~---~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~~~-~~---------  151 (400)
                      .+++++.     .   ++++|++.+|+|++........+.             ....+ +.... ... -+         
T Consensus       122 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  200 (452)
T 3n5m_A          122 TAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHV-TPPDCYRMPGIERENIYDVEC  200 (452)
T ss_dssp             HHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEE-CCCCTTTSTTTTTSCGGGCHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEe-CCCccccCccCCchhhHHHHH
Confidence            9999987     5   789999999999987755444332             12233 22110 000 02         


Q ss_pred             HHHHHHhhc-c-CCCCeEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          152 ADWLEKTLE-T-KPTPKLVSVVNP-GNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       152 ~e~l~~~l~-~-~~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                      +++|++.++ . ...+++|+++.+ +| +|.+. +.+++++|.++|++||+++|+||+|.++...+........+....+
T Consensus       201 ~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di  279 (452)
T 3n5m_A          201 VKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDI  279 (452)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCE
Confidence            889999887 1 122477777777 89 99755 8888999999999999999999999987655543222222222224


Q ss_pred             eccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNR  298 (400)
Q Consensus       228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~  298 (400)
                      .++||.++ +| +|+||++.+   +++++.+..      .....+++.+++++.++.++|+...  +..++..+.....+
T Consensus       280 ~t~sK~l~-~G~~~ig~~~~~---~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~  355 (452)
T 3n5m_A          280 ITMAKGIT-SAYLPLSATAVK---REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLL  355 (452)
T ss_dssp             EEECGGGG-TTSSCCEEEEEE---HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             Eeeccccc-CCCcceEEEEEC---HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            47899998 59 999999998   788877742      1234678889999999999887421  22333333333334


Q ss_pred             HHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC--------HHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEecc-C
Q 015768          299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-L  367 (400)
Q Consensus       299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~-~  367 (400)
                      +.+.+.+++++.+....+. +.++++.+.....+        ..+++..++ ++||.+.|+..|.  .++++||+++. .
T Consensus       356 ~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~  433 (452)
T 3n5m_A          356 EQLKEEIGEHPLVGDIRGK-GLLVGIELVNDKETKEPIDNDKIASVVNACK-EKGLIIGRNGMTTAGYNNILTLAPPLVI  433 (452)
T ss_dssp             HHHHHHHTTCTTEEEEEES-SSCEEEEEEEETTTTEECCHHHHHHHHHHHH-HTTEECEECTTSSTTCCCEEEECCCTTC
T ss_pred             HHHHHHHhcCCCeEEEEEE-EEEEEEEEecCCcccCCCCHHHHHHHHHHHH-HCCcEEeecCcccCCCCCEEEEECCCCC
Confidence            4444444455554444455 55555555321100        245677665 7899999987653  36899998776 7


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 015768          368 VEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~  385 (400)
                      +++++++++++|++++++
T Consensus       434 t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          434 SSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             CHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999999998864

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=100.00  E-value=1.1e-32  Score=263.25  Aligned_cols=332  Identities=10%  Similarity=0.065  Sum_probs=233.1

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+.++||..|.  ++++ .+|++++++.+.+.+...  ++. ....+.+.++++.+.+..+  .+++++++|+++|++.
T Consensus        63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~  137 (433)
T 1z7d_A           63 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI--CSR-AFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANET  137 (433)
T ss_dssp             TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSC--CCT-TSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred             CCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCC--ccC-CcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHH
Confidence            467789998865  4666 899999999999876421  211 1234555666666666656  5899999999999999


Q ss_pred             HHHHhc---------CCC-CEEEEeCCCccchhH-HHHhcC------------cEEEEeccCCCCCCCCCHHHHHHhhc-
Q 015768          105 IVLTLC---------DAG-DSVVMFAPYYFNSYM-SFQMTG------------VTHILVGPCSSKTLHPDADWLEKTLE-  160 (400)
Q Consensus       105 ~~~~l~---------~~g-d~vlv~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~e~l~~~l~-  160 (400)
                      ++.++.         .+| |+|++++|+|++... .+...|            ..++.+ |.      .|++.+++.++ 
T Consensus       138 al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l~~  210 (433)
T 1z7d_A          138 AYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKV-PY------DDLEALEEELKD  210 (433)
T ss_dssp             HHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEE-CT------TCHHHHHHHHTS
T ss_pred             HHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEe-CC------CCHHHHHHHhCC
Confidence            999864         367 999999999988653 333333            233444 33      28999999995 


Q ss_pred             cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCC
Q 015768          161 TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       161 ~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~  237 (400)
                      ++  +++|+++..+|++|.+ ++.+++++|.++|++||+++|+||+|.++...+......  ....+++  |+||.+| +
T Consensus       211 ~~--~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~-~  285 (433)
T 1z7d_A          211 PN--VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALS-G  285 (433)
T ss_dssp             TT--EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-T
T ss_pred             CC--EEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECcccc-C
Confidence            33  4777666556788975 688899999999999999999999998765544322111  1122333  8899998 8


Q ss_pred             c-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCc
Q 015768          238 G-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGA  312 (400)
Q Consensus       238 g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~  312 (400)
                      | +|+||++++   +++++.+.......+++.+++++.++.++|+...+  .+..++++++++++++.|+++    +.+.
T Consensus       286 G~~~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~  360 (433)
T 1z7d_A          286 GHYPISAVLAN---DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLKRELKDSKIVR  360 (433)
T ss_dssp             TSSCCEEEEEC---HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred             CCCCeEEEEEC---HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            8 899999998   77777665544556788899999888888874221  245566777777777777654    2212


Q ss_pred             ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ...+. +.++++.++....+..++...|. ++||.+.|+    .++++|++++. .+++++++++++|+++++++.
T Consensus       361 ~~~~~-g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~  430 (433)
T 1z7d_A          361 DVRGK-GLLCAIEFKNELVNVLDICLKLK-ENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFD  430 (433)
T ss_dssp             EEEEE-TTEEEEEECTTTCCHHHHHHHHH-HTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEee-eeEEEEEEccChhHHHHHHHHHH-HCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence            23333 67788888753124678888886 689999885    36899999876 799999999999999998764

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=100.00  E-value=2.4e-32  Score=258.29  Aligned_cols=319  Identities=19%  Similarity=0.179  Sum_probs=223.3

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhc---CCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVW---DPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~---~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      ..++.+++++..++.+.+++.+++.   ++ ...|....+..+..+++++++++.+|.+  +.++++++++|+..++.++
T Consensus        23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~   99 (398)
T 2rfv_A           23 STGALSTPIFQTSTFVFDSAEQGAARFALE-ESGYIYTRLGNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTL   99 (398)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHC------CCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHH
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCC-CCCCceeCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH
Confidence            3577788888666555554444433   21 2223333333455556666666666764  6667777789999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      .++||+|+++.|+|+++...+    +..|.+++.+ |.+      |++++++.+++++  ++|++++|+||||.+++   
T Consensus       100 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---  167 (398)
T 2rfv_A          100 CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFV-DAA------KPEEIRAAMRPET--KVVYIETPANPTLSLVD---  167 (398)
T ss_dssp             CCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEE-CTT------SHHHHHHHCCTTE--EEEEEESSBTTTTBCCC---
T ss_pred             hCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHhcCCCC--eEEEEECCCCCCCcccC---
Confidence            999999999999999988776    7789999988 653      7899999998654  99999999999999999   


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN  263 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~-~l~~~~~~  263 (400)
                      +++|.++|++||+++|+|++|+.+.+.. +   ...+.++++.|+||+++.+|.|+ ||++.+   +++++ .+......
T Consensus       168 l~~i~~l~~~~~~~li~De~~~~~~~~~-~---~~~~~di~~~s~sK~~~~~g~~~~G~~~~~---~~~~~~~~~~~~~~  240 (398)
T 2rfv_A          168 IETVAGIAHQQGALLVVDNTFMSPYCQQ-P---LQLGADIVVHSVTKYINGHGDVIGGIIVGK---QEFIDQARFVGLKD  240 (398)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTCTTTCC-G---GGGTCSEEEEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcccccCC-c---hhhCCcEEEEeCcccccCCCCceEEEEEEC---HHHHHHHHHHHHHh
Confidence            9999999999999999999999766532 1   12357799999999998789998 999998   66665 56655544


Q ss_pred             C-CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC--------------CCcccCC---CCceEEEee
Q 015768          264 I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAVKGG---EGAIYLWAR  325 (400)
Q Consensus       264 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~~---~~~~~~~~~  325 (400)
                      . +.+.+++.+.++..+++..    ..+.++..++.+.+.+.|++.+              .+.+..+   ..+.++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~  316 (398)
T 2rfv_A          241 ITGGCMSPFNAWLTLRGVKTL----GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFE  316 (398)
T ss_dssp             TTCCCCCHHHHHHHHHHHTTH----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred             CCCCCCCHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence            4 5678888999988888752    3344455566666666666543              2122222   135666668


Q ss_pred             CCCCCCCHHHHHHHHHHh---cCeEEeCCCccC-----------------------CCCeEEEEecc-CCHHHHHHHHHH
Q 015768          326 LPEKHLDDFEVVRWLAHR---HGVVVIPGGACG-----------------------CRGHLRISFGG-LVEDDCKAAADR  378 (400)
Q Consensus       326 ~~~~~~~~~~~~~~l~~~---~gi~v~~g~~~~-----------------------~~~~iRi~~~~-~~~~~~~~~~~~  378 (400)
                      ++..    ......++++   .|+.+.+|..+.                       .++.+|||++. .++++++.+.+.
T Consensus       317 ~~~~----~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a  392 (398)
T 2rfv_A          317 IAGG----LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHA  392 (398)
T ss_dssp             ETTH----HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred             EcCC----HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Confidence            7631    1222333333   378888885431                       16899999998 666666655555


Q ss_pred             HHH
Q 015768          379 LRR  381 (400)
Q Consensus       379 l~~  381 (400)
                      |++
T Consensus       393 l~~  395 (398)
T 2rfv_A          393 IRK  395 (398)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            543

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=100.00  E-value=2.6e-32  Score=262.02  Aligned_cols=346  Identities=13%  Similarity=0.088  Sum_probs=234.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+..  .|....+..+.+.++++++.+.++...+++++++|+++|++
T Consensus        41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~  118 (448)
T 3dod_A           41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAME  118 (448)
T ss_dssp             TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence            3568899998874  3443 58999999999987642  23234456678889999998888766789999999999999


Q ss_pred             HHHHHhcC----CC----CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCCCCCC-----------C
Q 015768          104 NIVLTLCD----AG----DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHP-----------D  151 (400)
Q Consensus       104 ~~~~~l~~----~g----d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~-----------~  151 (400)
                      .+++++..    +|    |+|++..|+|++........+.             .+..+ |.+ +.+..           |
T Consensus       119 ~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~d  196 (448)
T 3dod_A          119 IALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKA-PIP-YVYRSESGDPDECRDQC  196 (448)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEE-CCC-CCTTSSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEe-CCC-ccccCCccchhhhhHHH
Confidence            99999875    44    9999999999886644333221             22233 322 11111           3


Q ss_pred             HHHHHHhhcc-CCCCeEEEEeCCC-CCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          152 ADWLEKTLET-KPTPKLVSVVNPG-NPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       152 ~e~l~~~l~~-~~~~~~v~l~~p~-nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      +++|++.++. ...+++|+++.++ |++| .+++.+++++|.++|++||+++|+||+|.++...+........+....+.
T Consensus       197 ~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~  276 (448)
T 3dod_A          197 LRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM  276 (448)
T ss_dssp             HHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred             HHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE
Confidence            7889988872 1124667776666 8887 46788889999999999999999999999876554332221112222244


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHH
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR  298 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~  298 (400)
                      ++||+++ +| +|+||++.+   +++++.+..       .....+++.+++++.++.++|+..  ++...+..+.....+
T Consensus       277 t~sK~l~-~G~~~ig~v~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~  352 (448)
T 3dod_A          277 AAGKGIT-GGYLPIAVTFAT---EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLH  352 (448)
T ss_dssp             EECGGGG-TTSSCCEEEEEE---HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             Eeccccc-CCcCceEEEEEC---HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence            7889997 68 599999998   788888765       444567888999999999998742  122333334444444


Q ss_pred             HHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC----------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768          299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  367 (400)
Q Consensus       299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~  367 (400)
                      +.+.+ +..++.+....+. +.++++.++....+          ..+++..++ ++||.+.|+     .+++||+++. .
T Consensus       353 ~~l~~-l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----~~~iRi~~~~~~  424 (448)
T 3dod_A          353 FLLQD-LHALPHVGDIRQL-GFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL-----GDVIAFLPPLAS  424 (448)
T ss_dssp             HHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE-----TTEEEECCCTTC
T ss_pred             HHHHH-HhcCCCeEEEEee-eEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc-----CCEEEEECCCCC
Confidence            55555 5555543333344 66777777643211          367788776 789999885     3899998765 7


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015768          368 VEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +++++++++++|+++++++..
T Consensus       425 t~e~i~~~l~~l~~~l~~~~~  445 (448)
T 3dod_A          425 TAEELSEMVAIMKQAIHEVTS  445 (448)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999988753

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=100.00  E-value=7e-31  Score=250.39  Aligned_cols=331  Identities=17%  Similarity=0.141  Sum_probs=242.8

Q ss_pred             cCCCeE--EcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAV--SLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i--~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|.+.+  +|+.+.+++++|+++++++.+.+..+   .|+. ..+..++++++++++    +.  +++++|+|+++++..
T Consensus        12 gg~~~~~~~l~~~~p~~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~----~~--~~v~~~~ggt~al~~   82 (424)
T 2po3_A           12 GGPAAFDQPLLVGRPNRIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLA----GV--RHAVATCNATAGLQL   82 (424)
T ss_dssp             TCCCSCSSCEETTCCCCCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHH----TS--SEEEEESCHHHHHHH
T ss_pred             cCCccccccccccCCCCCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHh----CC--CeEEEeCCHHHHHHH
Confidence            344444  68889999988999999998888653   3765 577888999999988    43  689999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      ++.++. +||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++  ++|+++   ||+|...+  
T Consensus        83 ~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~tG~~~~--  153 (424)
T 2po3_A           83 LAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFA-DIDPDTGNLDPDQVAAAVTPRT--SAVVGV---HLWGRPCA--  153 (424)
T ss_dssp             HHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTSSBCHHHHGGGCCTTE--EEEEEE---CGGGCCCC--
T ss_pred             HHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhhCcCC--cEEEEE---CCCCCcCC--
Confidence            999986 78999999999999999999999999999 8887677889999999987654  888875   48999888  


Q ss_pred             HHHHHHHHHHHcCCEEEEccccc-ccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYE-YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                       +++|.++|+++|+++|+|++|+ ++.+.+..... ..  +++++|+||..+++|.|+||++.++  +++++++......
T Consensus       154 -l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~-~~--di~~~S~sk~K~l~~~~~G~~v~~~--~~l~~~l~~~~~~  227 (424)
T 2po3_A          154 -ADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGS-LG--DAEVFSFHATKAVNAFEGGAVVTDD--ADLAARIRALHNF  227 (424)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS-SS--SEEEEECCTTSSSCCSSCEEEEESC--HHHHHHHHHHHBT
T ss_pred             -HHHHHHHHHHcCCEEEEECccccCCeECCeeccc-cc--CEEEEeCCCCCCccCCCCeEEEeCC--HHHHHHHHHHHhc
Confidence             8999999999999999999999 45554432211 12  3888999844444568999999885  6777777665432


Q ss_pred             CC------------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCCc----eEEEeeC
Q 015768          264 IP------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA----IYLWARL  326 (400)
Q Consensus       264 ~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~----~~~~~~~  326 (400)
                      ..            +..+.+...++...    .++++++.++..++++++.+.|++++++.+.. +.++    .++++.+
T Consensus       228 ~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~  303 (424)
T 2po3_A          228 GFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEI  303 (424)
T ss_dssp             TTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEE
T ss_pred             CccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEE
Confidence            11            11223322222222    24466777788888899999999876545554 3322    3344666


Q ss_pred             CCC--CCCHHHHHHHHHHhcCeEEeCCCccC--------------CCC-------eEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          327 PEK--HLDDFEVVRWLAHRHGVVVIPGGACG--------------CRG-------HLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       327 ~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~--------------~~~-------~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      +..  ..+..++...| .++||.+.+.....              .++       .+|+++.. ++++|+++++++|+++
T Consensus       304 ~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~  382 (424)
T 2po3_A          304 DEATTGIHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC  382 (424)
T ss_dssp             CHHHHSSCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred             CCccchhhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence            530  13577888866 47999998732100              011       27776545 8999999999999999


Q ss_pred             HHHHh
Q 015768          383 LEELV  387 (400)
Q Consensus       383 l~~~~  387 (400)
                      +++..
T Consensus       383 ~~~~~  387 (424)
T 2po3_A          383 ATRGR  387 (424)
T ss_dssp             HHHHH
T ss_pred             HhhhH
Confidence            87654

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=100.00  E-value=1.1e-31  Score=256.61  Aligned_cols=329  Identities=13%  Similarity=0.131  Sum_probs=238.8

Q ss_pred             cCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCC--CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSIS--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        28 ~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      +|+.++||..|..  +++ .+|++++++.+.+.+....  .| +.....++++.+++++    |  .+++++++|+++|+
T Consensus        74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g--~~~v~~~~sGseA~  146 (439)
T 2oat_A           74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF----N--YHKVLPMNTGVEAG  146 (439)
T ss_dssp             TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH----T--CSEEEEESSHHHHH
T ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc----C--CCEEEEeCCHHHHH
Confidence            4677999988764  555 8999999999998764211  12 2233445555555544    5  58999999999999


Q ss_pred             HHHHHHhc---------CCC-CEEEEeCCCccchhH-HHHhcC------------cEEEEeccCCCCCCCCCHHHHHHhh
Q 015768          103 VNIVLTLC---------DAG-DSVVMFAPYYFNSYM-SFQMTG------------VTHILVGPCSSKTLHPDADWLEKTL  159 (400)
Q Consensus       103 ~~~~~~l~---------~~g-d~vlv~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~e~l~~~l  159 (400)
                      +.++.++.         .+| |.|++.+|+|++... .+...|            ..++.+ |.      .|++++++.+
T Consensus       147 ~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l  219 (439)
T 2oat_A          147 ETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII-PY------NDLPALERAL  219 (439)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEE-CS------SCHHHHHHHT
T ss_pred             HHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEe-CC------CCHHHHHHHh
Confidence            99999875         357 899999999988654 444334            345555 43      2799999999


Q ss_pred             ccCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCC
Q 015768          160 ETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~  236 (400)
                      +.. .+++|+++..++++|. +++.+++++|.++|++||+++|+||+|.++...+......  ....+++  |+||++| 
T Consensus       220 ~~~-~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~-  295 (439)
T 2oat_A          220 QDP-NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALS-  295 (439)
T ss_dssp             TST-TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-
T ss_pred             CCC-CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--Eeccccc-
Confidence            522 2467666655678896 5688899999999999999999999998765544322111  1122333  8899998 


Q ss_pred             Cc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc--c
Q 015768          237 MG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA--V  313 (400)
Q Consensus       237 ~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~  313 (400)
                      +| +|+||++++   +++++.+.......+++.+++.+.++.++|+...+  .+..++++++++++++.|++++...  .
T Consensus       296 ~G~~~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~  370 (439)
T 2oat_A          296 GGLYPVSAVLCD---DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTA  370 (439)
T ss_dssp             TTSSCCEEEEEC---HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTSCTTTEEE
T ss_pred             CCCCCeEEEEEC---HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            68 899999998   77777665544556788899999988888874221  2466778888999999998874311  1


Q ss_pred             cCCCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          314 KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       314 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ..+ .+.++++.++... .+..++...|. ++||.+.|+    .++++|++++. .+++++++++++|++++++
T Consensus       371 ~~~-~g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  438 (439)
T 2oat_A          371 VRG-KGLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPT----HGDIIRFAPPLVIKEDELRESIEIINKTILS  438 (439)
T ss_dssp             EEE-ETTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBS----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             EEe-eeeEEEEEEecCccHHHHHHHHHHH-HCCeEEecC----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence            223 3677888886531 24678888886 689999884    36899998875 7999999999999998864

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=100.00  E-value=3.7e-31  Score=251.69  Aligned_cols=358  Identities=12%  Similarity=0.076  Sum_probs=247.9

Q ss_pred             HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHHh
Q 015768           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQ   83 (400)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~~~~~~a~~l~~   83 (400)
                      ++.......+..+.+......+.+.|..+.+..  ++++++++.+.+.+.....|      +.......+++.+.+++++
T Consensus         5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~   82 (417)
T 3n0l_A            5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKK   82 (417)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred             chhhcCHHHHHHHHHHHHHHhcCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHH
Confidence            344445555666655544445778887766554  79999999888844221222      2223335666666777777


Q ss_pred             hcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH---HHHh--cCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768           84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQM--TGVTHILVGPCSSKTLHPDADWLEKT  158 (400)
Q Consensus        84 ~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~--~g~~~~~~~~~~~~~~~~~~e~l~~~  158 (400)
                      .+|.++++|++++| ++|+..++.++.++||+|+++.|+|+++..   .+..  .++.++.+ +.+ +++.+|++++++.
T Consensus        83 ~~g~~~~~i~~~sG-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~d~~~l~~~  159 (417)
T 3n0l_A           83 LFNCKFANVQPNSG-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFY-GVE-LDGRIDYEKVREI  159 (417)
T ss_dssp             HHTCSEEECCCSSH-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEE-CCC-TTSSCCHHHHHHH
T ss_pred             HhCCCCcceEeccH-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEec-cCC-CCCCcCHHHHHHH
Confidence            77887777877776 799999999999999999999999987654   3333  34566777 776 5567899999999


Q ss_pred             hc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEEEeccccccCC
Q 015768          159 LE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       159 l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~  236 (400)
                      ++ .++  ++|++++++|  |.+.+   +++|.++|++||+++|+|++++. ..+.+...... ...+++++|+||++  
T Consensus       160 i~~~~~--~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~-~~~di~~~s~sK~l--  229 (417)
T 3n0l_A          160 AKKEKP--KLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF-PYAHVVSSTTHKTL--  229 (417)
T ss_dssp             HHHHCC--SEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT-TTCSEEEEESSTTT--
T ss_pred             HHhcCC--eEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc-ccceEEEeeCcccc--
Confidence            98 455  8998887776  88899   89999999999999999999753 33333222111 24568999999988  


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCC-cCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          237 MGWRVGYIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      +|+|+||+++++  +++.+.+........ .+++...+.++..++.. ..+++.++.+++.++++++.+.|++.+. .+.
T Consensus       230 ~g~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~  306 (417)
T 3n0l_A          230 RGPRGGIIMTND--EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKF-KLV  306 (417)
T ss_dssp             CSCSCEEEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEG
T ss_pred             CCCCeeEEEECC--HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCc-eec
Confidence            577889999885  678888776654332 23455555555555543 3355678888899999999999988554 443


Q ss_pred             C-CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC------CCCeEEEEecc-----CCHHHHHHHHHHHHHH
Q 015768          315 G-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGG-----LVEDDCKAAADRLRRG  382 (400)
Q Consensus       315 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------~~~~iRi~~~~-----~~~~~~~~~~~~l~~~  382 (400)
                      . +..++++|+.++....+...+...| +++||.+.++..+.      .++.+|+++..     .+++++++++++|+++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~  385 (417)
T 3n0l_A          307 SDGTDNHLVLMSFLDREFSGKDADLAL-GNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADI  385 (417)
T ss_dssp             GGSCSSSEEEEECTTSSSCHHHHHHHH-HHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCceEEEEEcccCCCCHHHHHHHH-HHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHH
Confidence            3 3346788888865444666777655 58999998654332      24679999763     4689999999999999


Q ss_pred             HHHH
Q 015768          383 LEEL  386 (400)
Q Consensus       383 l~~~  386 (400)
                      +++.
T Consensus       386 l~~~  389 (417)
T 3n0l_A          386 LDDV  389 (417)
T ss_dssp             HHTT
T ss_pred             Hhcc
Confidence            9764

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=100.00  E-value=1.1e-30  Score=248.68  Aligned_cols=328  Identities=14%  Similarity=0.123  Sum_probs=237.9

Q ss_pred             CCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCC
Q 015768           37 QGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGD  114 (400)
Q Consensus        37 ~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd  114 (400)
                      .|.+.++ .++++++++.+.+.+.....|++..|..++++++++.+++.+|.+  ++++++++|+|+..++.++ .++||
T Consensus         6 ~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd   83 (418)
T 2c81_A            6 DHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGD   83 (418)
T ss_dssp             --CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence            4556664 479999999998876544447666776666777777777776865  6777888899999999999 89999


Q ss_pred             EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768          115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK  194 (400)
Q Consensus       115 ~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~  194 (400)
                      +|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++  ++|+++   ||+|...+   +++|.++|+
T Consensus        84 ~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~~G~~~~---~~~i~~~~~  154 (418)
T 2c81_A           84 EVIVPSLTWIATATAVLNVNALPVFV-DVEADTYCIDPQLIKSAITDKT--KAIIPV---HLFGSMAN---MDEINEIAQ  154 (418)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHGGGCCTTE--EEECCB---CCTTCCCC---HHHHHHHHH
T ss_pred             EEEECCCccHhHHHHHHHcCCEEEEE-ecCCCCCCcCHHHHHHhhCCCC--eEEEEe---CCcCCccc---HHHHHHHHH
Confidence            99999999999999999999999999 8876567889999999997654  888754   68999888   899999999


Q ss_pred             HcCCEEEEcccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC------
Q 015768          195 AAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP------  265 (400)
Q Consensus       195 ~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~------  265 (400)
                      +||+++|+|++|+.+. +++..... ..  ++++.|+  ||++|. | ++||++.++  +++++++........      
T Consensus       155 ~~~~~li~D~a~~~~~~~~~~~~~~-~~--~~~~~s~s~~K~~~~-g-~~g~~~~~~--~~l~~~~~~~~~~~~~~~~~~  227 (418)
T 2c81_A          155 EHNLFVIEDCAQSHGSVWNNQRAGT-IG--DIGAFSCQQGKVLTA-G-EGGIIVTKN--PRLFELIQQLRADSRVYCDDS  227 (418)
T ss_dssp             HTTCEEEEECTTCTTCEETTEETTS-SS--SEEEEECCTTSSSCS-S-SCEEEEESC--HHHHHHHHHHHBTTEEECSCG
T ss_pred             HCCCEEEEECcccccCccCCEeccc-cc--ceEEEeccCCcccCC-C-CeEEEEECC--HHHHHHHHHHHHhCccccccc
Confidence            9999999999999876 44322211 12  3666666  999985 7 999999864  677777765433211      


Q ss_pred             ------cC--------------ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCC-ce---
Q 015768          266 ------IC--------------ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG-AI---  320 (400)
Q Consensus       266 ------~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~-~~---  320 (400)
                            +.              .+.+........++    ++++..++.+++++++.+.|++++++.+. .+.+ +.   
T Consensus       228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~  303 (418)
T 2c81_A          228 SELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ----ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTY  303 (418)
T ss_dssp             GGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCC
T ss_pred             cccccchhhccccccccCcCCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccccc
Confidence                  11              11111111112222    25667777788889999999988665555 3443 22   


Q ss_pred             -EEEeeCCC---CCCCHHHHHHHHHHhcCeE---EeCCCccC---------------------------C---------C
Q 015768          321 -YLWARLPE---KHLDDFEVVRWLAHRHGVV---VIPGGACG---------------------------C---------R  357 (400)
Q Consensus       321 -~~~~~~~~---~~~~~~~~~~~l~~~~gi~---v~~g~~~~---------------------------~---------~  357 (400)
                       .+.+.++.   ...+..++...|.+++||.   +.++..+.                           .         .
T Consensus       304 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (418)
T 2c81_A          304 YGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG  383 (418)
T ss_dssp             SEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred             EEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence             23366653   1236788998887444999   88775220                           0         1


Q ss_pred             CeEEEEecc-C-CHHHHHHHHHHHHHHHHHH
Q 015768          358 GHLRISFGG-L-VEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       358 ~~iRi~~~~-~-~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.+||+++. + |++|++.+++.|+++++++
T Consensus       384 ~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~  414 (418)
T 2c81_A          384 QSIVIHHAILLAEPSHLSLLVDAVAELARKF  414 (418)
T ss_dssp             HEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence            489999987 8 9999999999999988754

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-31  Score=258.18  Aligned_cols=329  Identities=11%  Similarity=0.013  Sum_probs=248.9

Q ss_pred             CCcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC-----C
Q 015768           43 QPPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD-----A  112 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~-----~  112 (400)
                      ..++.+.+++.+.+...   ....|...++..++++++++++++.+|++  ++++++++|+++++..++.++++     +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~  154 (497)
T 3mc6_A           75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR  154 (497)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence            34567777777666542   12334445667789999999999999987  78999999999999999999864     5


Q ss_pred             C---CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          113 G---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       113 g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      |   |+|+++.++|+++...++..|++++.+ |.+++++.+|+++|++.+++++  ++|++++|+||+|.+.+   +++|
T Consensus       155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~p~nptG~~~~---l~~i  228 (497)
T 3mc6_A          155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHV-ELDPTTYQVDLGKVKKFINKNT--VLLVGSAPNFPHGIADD---IEGL  228 (497)
T ss_dssp             CCSSCEEEEETTSCHHHHHHHHHSCCEEEEE-CBCTTTCSBCTTTTGGGCCSSE--EEEEEETTCTTTCCCCS---CTTT
T ss_pred             CCCCceEEEeCCccHHHHHHHHHcCCeEEEE-ecCcccCcCCHHHHHHHHhhCC--EEEEEECCCCCCCcCCC---HHHH
Confidence            6   899999999999999999999999999 8877556789999999998765  99999999999999999   8899


Q ss_pred             HHHHHHcCCEEEEcccccccccC-----C---C-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYD-----G---R-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~-----~---~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      .++|++||+++|+|++|+.+...     +   . +......+.++++.|++|+++ +|.++|+++.++   +........
T Consensus       229 ~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~---~~~~~~~~~  304 (497)
T 3mc6_A          229 GKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGF-APKGSSVIMYRN---SDLRMHQYY  304 (497)
T ss_dssp             TTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTC-CCSSCEEEECSS---HHHHTTTSC
T ss_pred             HHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcC-CCCCceeEEecC---HHHHhhhhc
Confidence            99999999999999999865431     1   1 122233456788999999874 678899999884   333222111


Q ss_pred             hc-c---CC-------cCcc---HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEee
Q 015768          261 QD-N---IP-------ICAS---IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWAR  325 (400)
Q Consensus       261 ~~-~---~~-------~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~  325 (400)
                      .. .   ..       .+.+   ..+++++...+.  .+++.++.++..++++++++.|++ ++++.+..+..+.++++.
T Consensus       305 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~  382 (497)
T 3mc6_A          305 VNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG--ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFS  382 (497)
T ss_dssp             CBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEE
T ss_pred             ccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEe
Confidence            00 0   00       0111   344555555554  355678888999999999999999 566666644445566666


Q ss_pred             CCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       326 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      .+.  .+..++...|. ++||.+.++.   .+..+|+++...+++++++++++|+++++++.+.
T Consensus       383 ~~~--~~~~~l~~~L~-~~Gi~v~~~~---~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~~  440 (497)
T 3mc6_A          383 SKT--LNIHELSDRLS-KKGWHFNALQ---KPVALHMAFTRLSAHVVDEICDILRTTVQELKSE  440 (497)
T ss_dssp             CTT--TTHHHHHHHHH-TTTCBCEECC---SSCCEEEECCTTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred             CCC--CCHHHHHHHHH-hCCEEEecCC---CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            543  36788888886 7899987654   3557899988778999999999999999987653

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=100.00  E-value=2.8e-32  Score=261.75  Aligned_cols=341  Identities=10%  Similarity=-0.017  Sum_probs=243.9

Q ss_pred             cCC--CeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           28 GAK--NAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        28 ~~~--~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      +|+  .++||..+.  +.++ .+|++++++.+.+.+...  +.......+...++++++.+.++...+++++++|+++|+
T Consensus        71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~  148 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNH--VMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSV  148 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSC--CCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHH
T ss_pred             CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHH
Confidence            678  899998874  5555 689999999998875321  111222345666777777777777778999999999999


Q ss_pred             HHHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcC--------------cEEEEeccCCCCCC-CCCHHHHHHhh
Q 015768          103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTG--------------VTHILVGPCSSKTL-HPDADWLEKTL  159 (400)
Q Consensus       103 ~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~-~~~~e~l~~~l  159 (400)
                      +.+++++..       +| +.|++.+++|++........+              ..+..+ |.+..++ ..|+++|++.+
T Consensus       149 ~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~d~~~le~~l  227 (457)
T 3tfu_A          149 EVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFA-PQVPRDYDPAYSAAFEAQL  227 (457)
T ss_dssp             HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEE-CCCCSSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEe-cCCCcccCHHHHHHHHHHH
Confidence            999998875       55 589999999988765544431              122223 3322221 13788999988


Q ss_pred             ccC-CCCeEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEecccccc
Q 015768          160 ETK-PTPKLVSVVN-PGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAY  234 (400)
Q Consensus       160 ~~~-~~~~~v~l~~-p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~  234 (400)
                      +.. ..+++|+++. ++|++|.+. +.+++++|.++|++||+++|+||+|.++...+......  ....+++  |+||++
T Consensus       228 ~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l  305 (457)
T 3tfu_A          228 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKAL  305 (457)
T ss_dssp             HHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG
T ss_pred             HhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhh
Confidence            721 1247788877 789999765 78889999999999999999999999876554322111  1122233  889999


Q ss_pred             CCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768          235 GMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       235 g~~g-~~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      + +| +|+||++.+   +++++.+...     ....+++.+++++.++.++|+...+  +.+.++++++.+++++.|+++
T Consensus       306 ~-gG~~~lG~v~~~---~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~--~~~~~~~~~~~~~l~~~L~~l  379 (457)
T 3tfu_A          306 T-GGYLSLAATLCT---ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG--QDWRTRITELAAGLTAGLDTA  379 (457)
T ss_dssp             G-TTSSCCEEEEEE---HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHGGG
T ss_pred             h-CCCcceEEEEEc---HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHH
Confidence            7 55 699999999   7888888522     3446788899999999988873111  244556667777777777764


Q ss_pred             ---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          309 ---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       309 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                         +.+....+. ++++++.++... +..++...++ ++||.+.|.     .+++||+++. .+++++++++++|+++++
T Consensus       380 ~~~~~v~~vr~~-G~~~~i~l~~~~-~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~l~  451 (457)
T 3tfu_A          380 RALPAVTDVRVC-GAIGVIECDRPV-DLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVAR  451 (457)
T ss_dssp             GGSTTEEEEEEC-SSCEEEEESSCC-CHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             hcCCCeeeeecC-CeEEEEEECCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence               333333344 677778876542 5778888886 679999873     4799999776 799999999999999998


Q ss_pred             HHh
Q 015768          385 ELV  387 (400)
Q Consensus       385 ~~~  387 (400)
                      ++.
T Consensus       452 ~~~  454 (457)
T 3tfu_A          452 LVG  454 (457)
T ss_dssp             HC-
T ss_pred             Hhc
Confidence            753

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=100.00  E-value=6.9e-32  Score=259.00  Aligned_cols=344  Identities=15%  Similarity=0.073  Sum_probs=234.3

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+.  ..|....+..+.+.++++++.+..+.. .+++++|+|+++|+
T Consensus        58 ~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~  135 (451)
T 3oks_A           58 VDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAV  135 (451)
T ss_dssp             TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHH
T ss_pred             CCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHH
Confidence            3467899999873  5554 5899999999998764  234444456678888999988887643 57999999999999


Q ss_pred             HHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc--------------EEEEeccCCC-----------CCC-CCCHHH
Q 015768          103 VNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS-----------KTL-HPDADW  154 (400)
Q Consensus       103 ~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-----------~~~-~~~~e~  154 (400)
                      +.+++.+..  .++.|++..++|++........+.              .+..+ |...           ++. ..+++.
T Consensus       136 ~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~  214 (451)
T 3oks_A          136 ENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRA-PLSYPFRDAEFGKELATDGELAAKR  214 (451)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEE-CCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred             HHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccccchhhHHHHHH
Confidence            999988764  458999999999987765543321              33444 4331           100 012444


Q ss_pred             HHHhhc----cCCCCeEEEEeCCCCC-Ccc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          155 LEKTLE----TKPTPKLVSVVNPGNP-SGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       155 l~~~l~----~~~~~~~v~l~~p~np-tG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                      +++.+.    .++  .+++++.|.|+ +|. ..+.+++++|.++|++||+++|+||+|.++...+........+....+.
T Consensus       215 ~~~~l~~~~~~~~--~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~  292 (451)
T 3oks_A          215 AITVIDKQIGADN--LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI  292 (451)
T ss_dssp             HHHHHHHHTCGGG--EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred             HHHHHHhhcCCCC--EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee
Confidence            444443    222  44444555444 444 4577889999999999999999999999876554322222112222233


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH----H
Q 015768          229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE----A  304 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~----~  304 (400)
                      |+||.++ +|+|+||++.+   +++++.+.......+++.+++.+.++.++|+...+  .++.++++++.+++++    .
T Consensus       293 t~sK~l~-~G~~iG~v~~~---~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~  366 (451)
T 3oks_A          293 VTAKGIA-GGLPLSAVTGR---AEIMDSPHVSGLGGTYGGNPIACAAALATIETIES--EGLVARAQQIEKIMKDRLGRL  366 (451)
T ss_dssp             EECGGGG-TTSSCEEEEEE---HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHH
T ss_pred             eehhhhh-CCcceEEEEEC---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHH
Confidence            8899998 58999999998   78888777666677889999999999998874211  1333444444444444    4


Q ss_pred             hccCCCCcccCCCCceEEEeeCCC------CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768          305 LSPLGEGAVKGGEGAIYLWARLPE------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD  377 (400)
Q Consensus       305 L~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~  377 (400)
                      ++.++.+....+. +.++++.+..      ......+++..++ ++||.+.|+..+  .+++||+++. .++++++++++
T Consensus       367 ~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~  442 (451)
T 3oks_A          367 QAEDDRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAH-AAGVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLD  442 (451)
T ss_dssp             HHHCTTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHH-HTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHH
T ss_pred             HhhCCCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHH-hCCcEEecCCCC--CCEEEEECCCCCCHHHHHHHHH
Confidence            4445543344444 6677776632      0012456777665 789999987643  4789999876 79999999999


Q ss_pred             HHHHHHHH
Q 015768          378 RLRRGLEE  385 (400)
Q Consensus       378 ~l~~~l~~  385 (400)
                      +|++++++
T Consensus       443 ~l~~~l~~  450 (451)
T 3oks_A          443 VLEEVLRG  450 (451)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhh
Confidence            99999864

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=7.2e-32  Score=258.02  Aligned_cols=341  Identities=11%  Similarity=0.057  Sum_probs=226.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+.....| +.    ....++++.+.+.++ .++++++++|++++++
T Consensus        52 ~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~----~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~  125 (434)
T 3l44_A           52 VDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGT-PT----ALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVM  125 (434)
T ss_dssp             TTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSS-CC----HHHHHHHHHHHHHCT-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCC-CC----HHHHHHHHHHHHhCC-CCCEEEEeCchHHHHH
Confidence            4578899998876  4555 689999999998876433333 23    334455555555555 5789999999999999


Q ss_pred             HHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc-EEEEe-ccCCCCCC------------CCCHHHHHHhhccC-CCCe
Q 015768          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV-THILV-GPCSSKTL------------HPDADWLEKTLETK-PTPK  166 (400)
Q Consensus       104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~-~~~~~-~~~~~~~~------------~~~~e~l~~~l~~~-~~~~  166 (400)
                      .+++.+..  ++++|++..|+|++........+. ....+ .|.. .+.            ..|++++++.++.. ..++
T Consensus       126 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~  204 (434)
T 3l44_A          126 TTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDS-AGVPQSIAQEVITVPFNNVETLKEALDKWGHEVA  204 (434)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSS-TTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEE
T ss_pred             HHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCc-CCCCCcCCCceEecCcccHHHHHHHHHhCCCCEE
Confidence            99998764  679999999999886654433222 11111 0110 010            01789999988732 1135


Q ss_pred             EEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768          167 LVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       167 ~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      +|+++.++|++|.+. +.+++++|.++|++||+++|+||+|.+| ..+........+....+.++||.+| +|+|+||++
T Consensus       205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~  282 (434)
T 3l44_A          205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIG-GGLPIGAYG  282 (434)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGG-TTSSCEEEE
T ss_pred             EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhc-CCcCeeeEE
Confidence            555554566667655 8899999999999999999999999987 4332211111111112457899998 899999999


Q ss_pred             ccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCcccCCCC
Q 015768          246 YPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEG  318 (400)
Q Consensus       246 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~  318 (400)
                      ++   +++++.+..   .....+++.+++++.++.++|+...+  ++..++++++.+++++.|++    ++......+. 
T Consensus       283 ~~---~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-  356 (434)
T 3l44_A          283 GK---KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ--EGLYEKLDELGATLEKGILEQAAKHNIDITLNRL-  356 (434)
T ss_dssp             EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE-
T ss_pred             Ec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEee-
Confidence            88   788777655   22445788899999999888873111  23344445555555554443    4443334344 


Q ss_pred             ceEEEeeCCCCCC------------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       319 ~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.++++.+.....            ...+++..|+ ++||.+.++.    .+.+|+++. .+++++++++++|+++++++
T Consensus       357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~rl~~~-~t~e~i~~~l~~l~~~l~~~  430 (434)
T 3l44_A          357 KGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPSK----YEAWFLTTE-HTKEDIEYTIEAVGRAFAAL  430 (434)
T ss_dssp             TTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSST----TCCEECCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeecC----CCcEEEecc-cCHHHHHHHHHHHHHHHHHH
Confidence            5666666532111            1256777775 7899999864    457899765 59999999999999999887


Q ss_pred             hc
Q 015768          387 VK  388 (400)
Q Consensus       387 ~~  388 (400)
                      .+
T Consensus       431 ~~  432 (434)
T 3l44_A          431 AD  432 (434)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=100.00  E-value=2.2e-30  Score=248.87  Aligned_cols=333  Identities=13%  Similarity=-0.008  Sum_probs=247.3

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc-----EEEeCChHHHHHHHHHHhcC------
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-----VMVTAGANQAFVNIVLTLCD------  111 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~-----i~~~~g~t~a~~~~~~~l~~------  111 (400)
                      +.++.+.+++.+++..+ ...|...++..++++++.+++++.+|++.++     +++|+|+|+|+..++.++..      
T Consensus        53 ~~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~  131 (452)
T 2dgk_A           53 WDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM  131 (452)
T ss_dssp             CCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence            45678889998888654 3345555677889999999999999988765     99999999999999988753      


Q ss_pred             --CC-----CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          112 --AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       112 --~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                        +|     ++|+++. +|..+...++..|++++.+ |.+++++.+|+++|++.+++++  ++|++++|+||||.+.|  
T Consensus       132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v-~~~~~~~~~d~~~l~~~i~~~t--~~v~~~~~~n~tG~~~~--  205 (452)
T 2dgk_A          132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREI-PMRPGQLFMDPKRMIEACDENT--IGVVPTFGVTYTGNYEF--  205 (452)
T ss_dssp             HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEEC-CCBTTBCSCCHHHHHHHCCTTE--EEEECBBSCTTTCBBCC--
T ss_pred             HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEE-ecCCCCCeECHHHHHHHHhhCC--EEEEEEcCCcCCcccCC--
Confidence              55     5899999 9999999999999999999 8876456899999999998765  89999999999999999  


Q ss_pred             HHHHHHHHHHHc------CCEEEEccccccccc---CCC-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          185 LLKRISDLCKAA------GSWLVVDNTYEYFMY---DGR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       185 ~l~~i~~l~~~~------~~~li~D~a~~~~~~---~~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                       +++|.++|+++      |+++++|++|+.+..   ... +......+.+.++.|++|++ ++|.++||++.++  ++..
T Consensus       206 -l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~-~~~~~~G~~~~~~--~~~~  281 (452)
T 2dgk_A          206 -PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFG-LAPLGCGWVIWRD--EEAL  281 (452)
T ss_dssp             -HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTT-CCCSSCEEEEESS--GGGS
T ss_pred             -HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECccccc-CCCCCeEEEEEcC--HHHH
Confidence             88899999995      999999999998653   221 11111235677888999965 5788999999875  3322


Q ss_pred             -HHHHHhhcc---------CCcCc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----C
Q 015768          255 -TQLLKVQDN---------IPICA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----E  317 (400)
Q Consensus       255 -~~l~~~~~~---------~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~  317 (400)
                       +.+......         ..++.   ..+.++++...+.  .+.+.++.+++.++++++.+.|++++.+.+..+    .
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~  359 (452)
T 2dgk_A          282 PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG--REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDE  359 (452)
T ss_dssp             CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTT
T ss_pred             HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCC
Confidence             322110000         01111   3455555555553  355788889999999999999999876565543    2


Q ss_pred             CceEEEeeCCCCC---CCHHHHHHHHHHhcCeEEeCCC---ccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          318 GAIYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGG---ACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       318 ~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~---~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      ...++.++++...   .+..++...|. ++||.+....   .....+++|++++. +|+++++.+++.|+++++.+.+.
T Consensus       360 ~~~~v~f~~~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~~  437 (452)
T 2dgk_A          360 GIPAVCFKLKDGEDPGYTLYDLSERLR-LRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDH  437 (452)
T ss_dssp             BSSEEEEEECTTCCCSCCHHHHHHHHH-HTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CeEEEEEEecCcccccCCHHHHHHHHH-hcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3566777776421   24578888886 7898653211   11235589999987 78999999999999999887654

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=100.00  E-value=1.2e-31  Score=258.29  Aligned_cols=344  Identities=13%  Similarity=0.038  Sum_probs=240.1

Q ss_pred             hcCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+  .+.++ .+|++++++.+.+.+.. ..|....+..+.+.++++++.+..+...++|++++|+++|++
T Consensus        52 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~  130 (472)
T 3hmu_A           52 SEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELP-YYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND  130 (472)
T ss_dssp             TTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence            457889999887  35554 68999999999887632 122222344567778888888877766789999999999999


Q ss_pred             HHHHHhcC--------CCCEEEEeCCCccchhHHHHhcCc------------EEEEeccCCC----CCCCCC--------
Q 015768          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSS----KTLHPD--------  151 (400)
Q Consensus       104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~----~~~~~~--------  151 (400)
                      .+++.+..        +++.|++..++|++........+.            .+..+ |.+.    ..+ .+        
T Consensus       131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~-~~~~~~~~~~  208 (472)
T 3hmu_A          131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHI-NQPNWWAEGGD-MDPEEFGLAR  208 (472)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEE-CCCCHHHHCTT-CCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEe-CCCccccCCcc-cCHHHHHHHH
Confidence            99999874        468999999999987755443332            23334 3221    111 23        


Q ss_pred             HHHHHHhhcc-C-CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEE
Q 015768          152 ADWLEKTLET-K-PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVN  226 (400)
Q Consensus       152 ~e~l~~~l~~-~-~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~  226 (400)
                      +++|++.++. . ..+++|+++.+++++|.+ ++.+++++|.++|++||+++|+||+|.+|...+......  .-..+++
T Consensus       209 ~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~  288 (472)
T 3hmu_A          209 ARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM  288 (472)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred             HHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee
Confidence            7888888862 1 224666666667788875 488999999999999999999999999876555322111  1112233


Q ss_pred             EeccccccCCCcceeEEEEccCCcHHHHHHHHH--hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH-HHHHHHHH
Q 015768          227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV-RNREIIRE  303 (400)
Q Consensus       227 ~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~l~~  303 (400)
                        ++||+++.+|+|+|+++++   +++++.+..  .....+++.+++++.++.++|+..++  +.+.++++ ++.+++++
T Consensus       289 --t~sK~l~gg~~plG~v~~~---~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~~l~~  361 (472)
T 3hmu_A          289 --TIAKGLSSGYAPIGGSIVC---DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE--ENILDHVRNVAAPYLKE  361 (472)
T ss_dssp             --EECGGGTTTSSCCEEEEEE---HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHTHHHHHHH
T ss_pred             --eechhhhcCCcceEEEEEC---HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence              6789997444899999998   888888832  23445788899999999999874211  23445555 55666666


Q ss_pred             HhccC---CCCcccCCCCceEEEeeCCCCCC-------C----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CC
Q 015768          304 ALSPL---GEGAVKGGEGAIYLWARLPEKHL-------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LV  368 (400)
Q Consensus       304 ~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~  368 (400)
                      .|+++   +.+..+.+. +.++++.+.....       +    ..+++..++ ++||.+.++.     +++||+++. .+
T Consensus       362 ~L~~l~~~~~v~~vr~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~p~~~~t  434 (472)
T 3hmu_A          362 KWEALTDHPLVGEAKIV-GMMASIALTPNKASRAKFASEPGTIGYICRERCF-ANNLIMRHVG-----DRMIISPPLVIT  434 (472)
T ss_dssp             HHHGGGGSTTEEEEEEE-TTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHH-HTTBCCEEET-----TEEEECCCTTCC
T ss_pred             HHHHHhcCCCeEEEEec-CceEEEEEecCccccccccchhHHHHHHHHHHHH-HCCcEEEecC-----CEEEEECCCCCC
Confidence            55543   433344455 5566666543210       0    456777776 7899998853     899999765 79


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 015768          369 EDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       369 ~~~~~~~~~~l~~~l~~~~  387 (400)
                      ++++++++++|+++++++.
T Consensus       435 ~e~i~~~l~~l~~~l~~~~  453 (472)
T 3hmu_A          435 PAEIDEMFVRIRKSLDEAQ  453 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998765

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=100.00  E-value=6.6e-31  Score=248.02  Aligned_cols=320  Identities=15%  Similarity=0.103  Sum_probs=240.5

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-  109 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-  109 (400)
                      ++|+|+.  +.  .|+++++++.+.+.+..   |.+..+..++++.+++++    +.  +++++++|+++|+..++.++ 
T Consensus         9 ~~i~~~~--p~--~~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~al~~~~~~~~   75 (393)
T 1mdo_A            9 DFLPFSR--PA--MGAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLT----GN--QYAVAVSSATAGMHIALMALG   75 (393)
T ss_dssp             CCBCSCC--CC--CCHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTT
T ss_pred             cccccCC--CC--CCHHHHHHHHHHHhcCC---cCCChHHHHHHHHHHHHh----CC--CcEEEecChHHHHHHHHHHcC
Confidence            4678876  33  35788899988886542   334566788888888887    43  48999999999999999999 


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      .++||+|+++.|+|+++...++..|++++.+ |.+++++.+|++.+++.+++++  ++|+++   ||+|.+.+   +++|
T Consensus        76 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~--~~v~~~---~~~G~~~~---~~~i  146 (393)
T 1mdo_A           76 IGEGDEVITPSMTWVSTLNMIVLLGANPVMV-DVDRDTLMVTPEHIEAAITPQT--KAIIPV---HYAGAPAD---LDAI  146 (393)
T ss_dssp             CCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEECCB---CGGGCCCC---HHHH
T ss_pred             CCCCCEEEeCCCccHhHHHHHHHCCCEEEEE-eccCCcCCCCHHHHHHhcCCCc--eEEEEe---CCCCCcCC---HHHH
Confidence            8999999999999999999999999999999 8887777889999999997644  888865   48999988   8999


Q ss_pred             HHHHHHcCCEEEEccccccc-ccCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-
Q 015768          190 SDLCKAAGSWLVVDNTYEYF-MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP-  265 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~-~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-  265 (400)
                      .++|+++|+++|+|++|+.+ .+.+.+.   .. .++++.|+|  |+++  |.++||++.++  +++.+++........ 
T Consensus       147 ~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~-~d~~~~S~~k~K~l~--~~~~g~~~~~~--~~~~~~l~~~~~~~~~  218 (393)
T 1mdo_A          147 YALGERYGIPVIEDAAHATGTSYKGRHI---GA-RGTAIFSFHAIKNIT--CAEGGIVVTDN--PQFADKLRSLKFHGLG  218 (393)
T ss_dssp             HHHHHHHTCCBCEECTTCTTCEETTEET---TS-SSEEEEECCTTSSSC--SSSCEEEEESC--HHHHHHHHHHTBTTEE
T ss_pred             HHHHHHcCCeEEEECccccCCeECCeec---CC-CCeEEEeCCCCCccc--cccceEEEeCC--HHHHHHHHHHHhcCCc
Confidence            99999999999999999964 3333211   11 678899999  7774  45899999865  677777765432110 


Q ss_pred             -----------------------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-C-----
Q 015768          266 -----------------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G-----  316 (400)
Q Consensus       266 -----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~-----  316 (400)
                                             +..+.+...++...++.    +++..++.+++++++.+.|++++ +.+.. +     
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~  293 (393)
T 1mdo_A          219 VDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK----LDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHI  293 (393)
T ss_dssp             CC-----------CCEESSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEE
T ss_pred             ccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCC
Confidence                                   12344444444444443    45666677778899999998887 45432 2     


Q ss_pred             CCceEEEeeCCCC--CCCHHHHHHHHHHhcCeEEeCCCcc--------------C-------CCCeEEEEecc-CCHHHH
Q 015768          317 EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGAC--------------G-------CRGHLRISFGG-LVEDDC  372 (400)
Q Consensus       317 ~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~--------------~-------~~~~iRi~~~~-~~~~~~  372 (400)
                      .+++++|+.++..  ..+..++...|. ++||.+.+|..+              .       ....+|++++. ++++|+
T Consensus       294 ~~~~~~~v~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i  372 (393)
T 1mdo_A          294 HAWHLFIIRVDEARCGITRDALMASLK-TKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDF  372 (393)
T ss_dssp             CCCSCEEEECCHHHHSSCHHHHHHHHH-HTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHH
T ss_pred             ceeEEEEEEecccccccCHHHHHHHHH-hCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHH
Confidence            3356788888730  136778888876 789999988754              1       13479999986 799999


Q ss_pred             HHHHHHHHHHHHHH
Q 015768          373 KAAADRLRRGLEEL  386 (400)
Q Consensus       373 ~~~~~~l~~~l~~~  386 (400)
                      +.++++|+++++..
T Consensus       373 ~~~~~~l~~~~~~~  386 (393)
T 1mdo_A          373 DRVITALHQIAGQG  386 (393)
T ss_dssp             HHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999887654

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=100.00  E-value=4.2e-32  Score=260.05  Aligned_cols=328  Identities=17%  Similarity=0.134  Sum_probs=232.5

Q ss_pred             CCeEEcCCC-CCCCCCcHHHHHHHHHhh---cCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           30 KNAVSLAQG-VVYWQPPKMAMEKVKELV---WDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        30 ~~~i~~~~~-~~~~~~~~~v~~a~~~~~---~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      .++|+|+.+ +++++.|+++.++.....   .+.....|+ ..+.+ .++++++++++.+|.  +++++++++++|+..+
T Consensus        89 ~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~--~~~i~~~sGt~al~~~  164 (464)
T 1ibj_A           89 TLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA--DRAFCFTSGMAALSAV  164 (464)
T ss_dssp             HHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH
T ss_pred             CeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC--CeEEEECCHHHHHHHH
Confidence            467888886 777777787777665431   122244564 34555 789999999988885  3778888889999988


Q ss_pred             HHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          106 VLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       106 ~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      +. +.++||+|+++.|+|+++...    ++..|++++.+ |.+      |++++++.+++++  ++|++++|+||||.++
T Consensus       165 l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~------d~~~l~~~i~~~t--k~v~l~~p~NptG~v~  234 (464)
T 1ibj_A          165 TH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRV-NTT------KLDEVAAAIGPQT--KLVWLESPTNPRQQIS  234 (464)
T ss_dssp             HT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEE-CTT------SHHHHHHHCCSSE--EEEEECSSCTTTCCCC
T ss_pred             HH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHHhccCc--eEEEEeCCCCCCCEee
Confidence            75 778999999999999988764    45679999988 653      7899999998655  9999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHh
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                      +   +++|.++|++||+++|+|++|..+..    ......+.++++.|+||+++. +|+++||++.++  +++++.+...
T Consensus       235 ~---l~~i~~la~~~gi~livDea~~~g~~----~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~--~~l~~~l~~~  305 (464)
T 1ibj_A          235 D---IRKISEMAHAQGALVLVDNSIMSPVL----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFL  305 (464)
T ss_dssp             C---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECS--HHHHHHHHHH
T ss_pred             c---HHHHHHHHHHcCCEEEEECCCccccc----CChhhcCCEEEEECCcccccCCCCCcEEEEEECh--HHHHHHHHHH
Confidence            8   99999999999999999999985322    111224678999999999964 488999999885  5787888766


Q ss_pred             hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH----------HHhccCCCCcccCCC---CceEEEeeCC
Q 015768          261 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR----------EALSPLGEGAVKGGE---GAIYLWARLP  327 (400)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~----------~~L~~~~~~~~~~~~---~~~~~~~~~~  327 (400)
                      ......+.+++.++++..+++.....+++..+......+++.          +.|++++.+.+..++   .+.++++.++
T Consensus       306 ~~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~  385 (464)
T 1ibj_A          306 QNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG  385 (464)
T ss_dssp             HHHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS
T ss_pred             HHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC
Confidence            544456678888888888887522222222222222222222          123333333333332   2567788874


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCc------------c----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGA------------C----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~------------~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      . ......+.+.| +..||.+.+|..            +          + .++++|++++.   |++++++++|+++++
T Consensus       386 ~-~~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~  460 (464)
T 1ibj_A          386 S-VALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFK  460 (464)
T ss_dssp             C-HHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHH
T ss_pred             C-HHHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHh
Confidence            2 10123455555 357888888751            1          1 15789999996   889999999999986


Q ss_pred             H
Q 015768          385 E  385 (400)
Q Consensus       385 ~  385 (400)
                      +
T Consensus       461 ~  461 (464)
T 1ibj_A          461 T  461 (464)
T ss_dssp             S
T ss_pred             h
Confidence            5

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=100.00  E-value=1.5e-31  Score=258.03  Aligned_cols=347  Identities=12%  Similarity=0.039  Sum_probs=246.3

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+.. ..+ ...+..+.+.++++++.+.++...+++++++|+++|++
T Consensus        51 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~-~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~  128 (476)
T 3i5t_A           51 EDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP-YAS-PWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVD  128 (476)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC-CCC-TTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-Ccc-cCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHH
Confidence            3578899998873  5565 68999999999887632 111 21456788899999999988767789999999999999


Q ss_pred             HHHHHhcC--------CCCEEEEeCCCccchhHHHHhcCcE-------------EEEec-cCCCCCCCCC--------HH
Q 015768          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVT-------------HILVG-PCSSKTLHPD--------AD  153 (400)
Q Consensus       104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~-~~~~~~~~~~--------~e  153 (400)
                      .+++++..        .++.|++..|+|++........+..             +..+. |....++..+        ++
T Consensus       129 ~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  208 (476)
T 3i5t_A          129 SALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQ  208 (476)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHH
Confidence            99999863        3579999999999877555433321             12220 2211111112        77


Q ss_pred             HHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CCCcEEEEec
Q 015768          154 WLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EGDHVVNLFS  229 (400)
Q Consensus       154 ~l~~~l~~-~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~i~~~s  229 (400)
                      +|++.++. . ..+++|+++.++|++|. +++.+++++|.++|++||+++|+||+|.++...+...... ..+....+.+
T Consensus       209 ~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t  288 (476)
T 3i5t_A          209 EFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT  288 (476)
T ss_dssp             HHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE
T ss_pred             HHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhh
Confidence            88888862 1 22477777777888885 7899999999999999999999999999876655332111 1111111336


Q ss_pred             cccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          230 FSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       230 ~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      +||++| +| +|+|+++.+   +++++.+...       ....+++.+++++.++.++|+..++  +++.++++++.+++
T Consensus       289 ~sK~l~-~G~~plg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~l  362 (476)
T 3i5t_A          289 FAKGVT-SGYVPLGGLAIS---EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER--EGIVDQAREMADYF  362 (476)
T ss_dssp             ECGGGG-TTSSCCEEEEEC---HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHH
T ss_pred             hhhhhc-CCCcCeEEEEEC---HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHH
Confidence            789998 68 999999998   7888887653       3446788999999999999974221  34556667777777


Q ss_pred             HHHhccC---CCCcccCCCCceEEEeeCCCCCC----------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768          302 REALSPL---GEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  367 (400)
Q Consensus       302 ~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~  367 (400)
                      ++.|+.+   +.+..+.+. +.++++.+.....          ....++..++ ++||.+.|.     .+++||+++. .
T Consensus       363 ~~~L~~l~~~~~v~~v~~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRi~p~l~~  435 (476)
T 3i5t_A          363 AAALASLRDLPGVAETRSV-GLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF-ELGLIVRPL-----GDLCVISPPLII  435 (476)
T ss_dssp             HHHHHTTTTSTTEEEEEEE-TTEEEEEECCC-----CCHHHHHHHHHHHHHHH-HTTEECEEE-----TTEEEECCCTTC
T ss_pred             HHHHHHHhcCCCeEEEEec-CceeEEEEecCccccccccchhHHHHHHHHHHH-HCCCEEEec-----CCEEEEECCCCC
Confidence            7776654   333344455 5566666654210          1446677776 789999883     2899999665 7


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015768          368 VEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      +++++++++++|+++++++.+
T Consensus       436 t~e~i~~~l~~l~~~l~~~~~  456 (476)
T 3i5t_A          436 SRAQIDEMVAIMRQAITEVSA  456 (476)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988764

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=100.00  E-value=1e-31  Score=258.06  Aligned_cols=340  Identities=16%  Similarity=0.094  Sum_probs=239.5

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      +|+.++||+.+.  ++++ .+|++++++.+.+.+..   +... .+..+.+.++++.+.+.++.++++|++++|+++|++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~  124 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECAL  124 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHH
T ss_pred             CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence            457789998765  4454 38999999999987642   2111 334556778888888877777899999999999999


Q ss_pred             HHHHHhcC--------CCCEEEEeCCCccchhH-HHHhcCc------------EEEEeccCCC--C-CC-CCC-------
Q 015768          104 NIVLTLCD--------AGDSVVMFAPYYFNSYM-SFQMTGV------------THILVGPCSS--K-TL-HPD-------  151 (400)
Q Consensus       104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~--~-~~-~~~-------  151 (400)
                      .+++++..        +||+|++.+|+|++... .+...|.            .+..+ +.+.  . ++ .+|       
T Consensus       125 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~d~~~~~~~  203 (449)
T 3a8u_X          125 TAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHL-PHTLLASNAYSRGMPKEGGIA  203 (449)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEE-CCCCCGGGTTCSSSCSSSHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEe-cCCccccCccccCChHHHHHH
Confidence            99998764        67999999999988653 4444331            23333 3321  1 00 135       


Q ss_pred             -HHHHHHhhccC--CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEE
Q 015768          152 -ADWLEKTLETK--PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVV  225 (400)
Q Consensus       152 -~e~l~~~l~~~--~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i  225 (400)
                       ++.|++.++..  ..+++|+++..+|++|. +.+.+++++|.++|++||+++|+||+|..+...+......  ....++
T Consensus       204 ~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di  283 (449)
T 3a8u_X          204 LADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDL  283 (449)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCE
Confidence             89999988731  12355554444578996 6679999999999999999999999997665443321111  111223


Q ss_pred             EEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHh---------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLV  295 (400)
Q Consensus       226 ~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  295 (400)
                      +  |+||.++ +| +|+||++.+   +++++.+...         ....+++.+++++.++.++|+...+  .+..++++
T Consensus       284 ~--s~sK~l~-~G~~~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~  355 (449)
T 3a8u_X          284 M--CIAKQVT-NGAIPMGAVIAS---TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK--ENLVQSVA  355 (449)
T ss_dssp             E--EECGGGG-TTSSCCEEEEEE---HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHH
T ss_pred             E--EEccccc-CCCCceEEEEEC---HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence            3  8899998 57 999999988   7888888753         2235677889999888888874221  24566777


Q ss_pred             HHHHHHHHHhccCCCCcc---cCCCCceEEEeeCCCCCC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768          296 RNREIIREALSPLGEGAV---KGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  367 (400)
Q Consensus       296 ~~~~~l~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~  367 (400)
                      ++.+++++.|++++....   ..+ .++++|+.++....    +..++...|. ++||.+.++     .+++||+++. .
T Consensus       356 ~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRis~~~~~  428 (449)
T 3a8u_X          356 EVAPHFEKALHGIKGAKNVIDIRN-FGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFG-----GDTLQFGPTFNS  428 (449)
T ss_dssp             HHHHHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEE-----TTEEEECCCTTC
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEee-eEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecC-----CCEEEEECCCcC
Confidence            888888888877542221   223 36888888875321    1236888776 679999986     2899999764 7


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 015768          368 VEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       368 ~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++++++++++|+++++++
T Consensus       429 t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          429 KPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             CHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998764

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=100.00  E-value=5e-31  Score=253.82  Aligned_cols=335  Identities=11%  Similarity=0.044  Sum_probs=232.2

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .+++||..+....+.++++++++.    .. ...|.+..+..++++++++++    +  .+++++|+|+++|+..++.++
T Consensus        42 ~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~----~--~~~~~~~~~gt~a~~~al~~l  110 (456)
T 2ez2_A           42 DIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELF----G--FKHIVPTHQGRGAENLLSQLA  110 (456)
T ss_dssp             GCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHH----C--CSEEEEESSHHHHHHHHHHHH
T ss_pred             cceeeeccccCCccCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHh----C--CCcEEEeCCcHHHHHHHHHHh
Confidence            345555554444445677777665    22 235766677788999999987    4  358999999999999999999


Q ss_pred             cCCCCEEEEeCCCc-cchhHHHHhcCcEEEEeccCCCC---------CCCCCHHHHHHhhccCC--CCeEEEEeCCCC-C
Q 015768          110 CDAGDSVVMFAPYY-FNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETKP--TPKLVSVVNPGN-P  176 (400)
Q Consensus       110 ~~~gd~vlv~~p~~-~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~e~l~~~l~~~~--~~~~v~l~~p~n-p  176 (400)
                      .++||  +++.|+| ..+...++..|++++.+ +.+++         ++.+|+++|++.+++++  .+++|++++|+| |
T Consensus       111 ~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~p  187 (456)
T 2ez2_A          111 IKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDI-VRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLA  187 (456)
T ss_dssp             CCTTC--EEEESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTT
T ss_pred             CCCCC--EeccccccchhHHHHHHcCCEEEEe-cccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCC
Confidence            99999  7889999 66678889999999988 77632         35789999999987532  248899999998 9


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccc----------cccCCCCcc-----ccCCCcEEEEeccccccCCCccee
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEY----------FMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRV  241 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~----------~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~~g~~~  241 (400)
                      ||.+++.+++++|.++|++||+++|+||+|+.          +.+.+....     ...... +++.|++|..+ +| ++
T Consensus       188 tG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d-~~~~S~kk~~~-~~-~g  264 (456)
T 2ez2_A          188 GGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYAD-GCTMSGKKDCL-VN-IG  264 (456)
T ss_dssp             TSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTC-CS-SC
T ss_pred             CCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCC-EEEEeCcccCC-CC-ce
Confidence            99999999999999999999999999999986          234443210     011222 44447788765 56 68


Q ss_pred             EEEEccCCcHHHHHHHHHhhcc-----CCcCccHHHHHH-HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          242 GYIAYPSEVEGFATQLLKVQDN-----IPICASIISQHL-ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       242 G~i~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      ||++.++  +++++.+......     ...+.+.....+ +...++...   ++..++..++.+++.+.|++.+ +.+..
T Consensus       265 G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~g-~~~~~  338 (456)
T 2ez2_A          265 GFLCMND--DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLKAAG-VPIVE  338 (456)
T ss_dssp             EEEEESC--HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTT-CCBCS
T ss_pred             eEEEECC--HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHhcCC-Ccccc
Confidence            9999843  6777776654321     111223233333 222222111   3445555666778888887764 35666


Q ss_pred             CCCceEEEeeCCC--CCCCHHHH-----HHHHHHhcCeEEeC-CCcc------------CCCCeEEEEecc--CCHHHHH
Q 015768          316 GEGAIYLWARLPE--KHLDDFEV-----VRWLAHRHGVVVIP-GGAC------------GCRGHLRISFGG--LVEDDCK  373 (400)
Q Consensus       316 ~~~~~~~~~~~~~--~~~~~~~~-----~~~l~~~~gi~v~~-g~~~------------~~~~~iRi~~~~--~~~~~~~  373 (400)
                      |.+++++|+.+..  ...+..++     ..+|++++||.+.+ |..|            ...+++||+++.  +++++++
T Consensus       339 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~  418 (456)
T 2ez2_A          339 PVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMD  418 (456)
T ss_dssp             SCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHH
T ss_pred             CCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHH
Confidence            7778888887631  11133344     66665688998765 4322            124789999984  5899999


Q ss_pred             HHHHHHHHHHHHHh
Q 015768          374 AAADRLRRGLEELV  387 (400)
Q Consensus       374 ~~~~~l~~~l~~~~  387 (400)
                      +++++|++++++..
T Consensus       419 ~~~~~l~~~l~~~~  432 (456)
T 2ez2_A          419 VVADGIIKLYQHKE  432 (456)
T ss_dssp             HHHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHhhhh
Confidence            99999999998754

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=100.00  E-value=1.4e-31  Score=254.57  Aligned_cols=335  Identities=12%  Similarity=0.066  Sum_probs=240.8

Q ss_pred             HHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC---CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768           22 IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG---ADEGLPELRDALVKKLNQENKLYKSSVMVTAGA   98 (400)
Q Consensus        22 ~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~---~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~   98 (400)
                      +++.|-..++.+.|+.+.+. +.|+++++++.+.+.+.....+.   ...+.....+++.+.+++.+|++++++++|+|+
T Consensus        19 ~r~~f~~~~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~   97 (416)
T 1qz9_A           19 LRQQFALPEGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTT   97 (416)
T ss_dssp             GGGGBCCCTTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCH
T ss_pred             HHHhCCCCCCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCCh
Confidence            34444444678889887765 67889999999988753111110   011333555667777777778888899999999


Q ss_pred             HHHHHHHHHHhc------CCCCEE-EEeCCCccchhHHHH----hc--CcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768           99 NQAFVNIVLTLC------DAGDSV-VMFAPYYFNSYMSFQ----MT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (400)
Q Consensus        99 t~a~~~~~~~l~------~~gd~v-lv~~p~~~~~~~~~~----~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~  165 (400)
                      ++++..++.++.      ++||+| ++..++|+++...+.    ..  |++++.+ |.        ++++++.+++++  
T Consensus        98 t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--------~~~l~~~i~~~~--  166 (416)
T 1qz9_A           98 SINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLV-DS--------PEELPQAIDQDT--  166 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEE-SS--------GGGHHHHCSTTE--
T ss_pred             hHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEe-Cc--------HHHHHHHhCCCc--
Confidence            999999998876      899874 555567766554432    23  9999888 64        678888887654  


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee-EEE
Q 015768          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYI  244 (400)
Q Consensus       166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-G~i  244 (400)
                      ++|++++|+||||.+.+   +++|.++|++||+++|+|++|+...   .+......+.++++.|+||+++ +|.++ |++
T Consensus       167 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~---~~~~~~~~~~d~~~~s~~K~l~-~g~~~~g~l  239 (416)
T 1qz9_A          167 AVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA---VPVDLHQAGADYAIGCTYKYLN-GGPGSQAFV  239 (416)
T ss_dssp             EEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT---SCCCHHHHTCSEEEECSSSTTC-CCTTCCCEE
T ss_pred             eEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccC---cCCChhhcCCCEEEecCcccCC-CCCCCeEEE
Confidence            99999999999999999   8999999999999999999998422   1111111245688999999984 67777 999


Q ss_pred             EccCCcHHHHHHHHHhh-----------------------ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHH
Q 015768          245 AYPSEVEGFATQLLKVQ-----------------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREI  300 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~  300 (400)
                      +.+   +++++.+....                       .....+++...+.++..+++.. .+++++..+++.+++++
T Consensus       240 ~~~---~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~  316 (416)
T 1qz9_A          240 WVS---PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDL  316 (416)
T ss_dssp             EEC---TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred             EEC---HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            988   45544443321                       1112346677776666666532 13467788889999999


Q ss_pred             HHHHhccC-C--CCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec--cCCHHH
Q 015768          301 IREALSPL-G--EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG--GLVEDD  371 (400)
Q Consensus       301 l~~~L~~~-~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~~  371 (400)
                      +.+.|+++ +  ++.+..+.    .+.++++.++.    ..++...|. ++||.+..    ..++++||+++  .+++++
T Consensus       317 l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~-~~gi~~~~----~~~~~lRis~~~~~~t~~~  387 (416)
T 1qz9_A          317 FIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE----GYAVIQALI-DRGVIGDY----REPRIMRFGFTPLYTTFTE  387 (416)
T ss_dssp             HHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT----HHHHHHHHH-TTTEECEE----ETTTEEEEECCTTTCCHHH
T ss_pred             HHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC----HHHHHHHHH-hCCcEecc----CCCCeEEEeCcccCCCHHH
Confidence            99999875 4  44555542    25678888873    677888776 78998753    24689999997  379999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 015768          372 CKAAADRLRRGLEELV  387 (400)
Q Consensus       372 ~~~~~~~l~~~l~~~~  387 (400)
                      +++++++|++++++..
T Consensus       388 i~~~~~~l~~~~~~~~  403 (416)
T 1qz9_A          388 VWDAVQILGEILDRKT  403 (416)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhccc
Confidence            9999999999998754

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=100.00  E-value=3.6e-31  Score=250.84  Aligned_cols=349  Identities=16%  Similarity=0.128  Sum_probs=241.4

Q ss_pred             HHHHHHHHHhc-CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcCCCCC
Q 015768           18 IMVQIQELVRG-AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENKLYKS   90 (400)
Q Consensus        18 ~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~~~~~   90 (400)
                      .+..+.+..+. ...+++++.+ +++  |+++++++.+.+.+.....      |.......++++.+++++++.+|.+++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~   87 (405)
T 2vi8_A           11 VFAAIEQERKRQHAKIELIASE-NFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA   87 (405)
T ss_dssp             HHHHHHHHHHHHHHSEECCTTC-CCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred             HHHHHHHHHHHhhcceeeccCc-ccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce
Confidence            34444443332 2456666554 333  8999999998885321111      211122345665556677777787754


Q ss_pred             cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH-H--HHhcC--cEEEEeccCCCCCCCCCHHHHHHhhcc-CCC
Q 015768           91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-S--FQMTG--VTHILVGPCSSKTLHPDADWLEKTLET-KPT  164 (400)
Q Consensus        91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~  164 (400)
                      .+++++| ++++..++.++.++||+|+++.|+|+++.. .  +...|  .+++.+ +.+++++.+|++.+++.+++ ++ 
T Consensus        88 ~i~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~-  164 (405)
T 2vi8_A           88 NVQPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAY-GVDPETHVIDYDDVREKARLHRP-  164 (405)
T ss_dssp             ECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEE-CBCTTTCSBCHHHHHHHHHHHCC-
T ss_pred             EEEecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEec-ccccccCCcCHHHHHHHHHhcCC-
Confidence            4444555 999999999999999999999999988753 1  12334  477777 76645567899999999975 54 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccC-CCcceeE
Q 015768          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVG  242 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G  242 (400)
                       ++|++ +++|. |...+   +++|.++|++||+++|+|++|+.+.. .+...... ...+++++|+||+++ +.|   |
T Consensus       165 -~~v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~-~~~di~~~s~sK~~~g~~g---G  234 (405)
T 2vi8_A          165 -KLIVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PYAHFVTTTTHKTLRGPRG---G  234 (405)
T ss_dssp             -SEEEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSSTTCCCSC---E
T ss_pred             -eEEEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCcc-ccCCEEEEeccccCCCCCC---e
Confidence             88876 44443 56667   89999999999999999999985432 22211111 134588999999996 444   9


Q ss_pred             EEEccCCcHHHHHHHHHhhccCCcCc-cHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCc
Q 015768          243 YIAYPSEVEGFATQLLKVQDNIPICA-SIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGA  319 (400)
Q Consensus       243 ~i~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~  319 (400)
                      |++++   +++.+.+........++. +.....++..+++.. .+++++..+++.++++++.+.|++++ +.+..+ ..+
T Consensus       235 ~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~  310 (405)
T 2vi8_A          235 MILCQ---EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEG-FTLVSGGTDN  310 (405)
T ss_dssp             EEEEC---HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSS
T ss_pred             EEEEc---HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCCc
Confidence            99988   788888876654334433 444555545566532 25678888999999999999999884 466554 347


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCc----c--CCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHHh
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA----C--GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~----~--~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +++|+.++....+..++...| .++||.+.+|..    +  ..++++|++++.     ++++++++++++|++++++..
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~  388 (405)
T 2vi8_A          311 HLLLVDLRPQQLTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG  388 (405)
T ss_dssp             SEEEEECGGGTCCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred             eEEEEEccCCCCCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence            889999874333577788777 589999998752    1  235789999984     579999999999999987653

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=100.00  E-value=7.4e-31  Score=256.15  Aligned_cols=309  Identities=13%  Similarity=0.080  Sum_probs=235.5

Q ss_pred             CCCCCCCCcHHHHHHHHHHHHhhcCCCC--CcE--EEeCChHHHHHHHHHHhcCCC--------CEEEEeCCCccchhHH
Q 015768           62 SKYGADEGLPELRDALVKKLNQENKLYK--SSV--MVTAGANQAFVNIVLTLCDAG--------DSVVMFAPYYFNSYMS  129 (400)
Q Consensus        62 ~~y~~~~g~~~~~~~~a~~l~~~~~~~~--~~i--~~~~g~t~a~~~~~~~l~~~g--------d~vlv~~p~~~~~~~~  129 (400)
                      ..|....+...+++++++++.+.+|.+.  +++  ++|+|+++++..++.++.++|        |+|+++.++|.++...
T Consensus       129 ~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~  208 (514)
T 3mad_A          129 LHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA  208 (514)
T ss_dssp             TCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH
T ss_pred             cccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH
Confidence            3444455667889999999999998764  678  999999999999999998766        8999999999999999


Q ss_pred             HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768          130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF  209 (400)
Q Consensus       130 ~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~  209 (400)
                      ++..|++++.+ |.++ ++.+|+++|++.+++++  ++|++++|+||+|.+.+   +++|.++|++||+++|+|++|+.+
T Consensus       209 ~~~~G~~v~~v-~~~~-~~~~d~~~Le~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~  281 (514)
T 3mad_A          209 AQYFGIKLVRT-PLDA-DYRADVAAMREAITPNT--VVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGF  281 (514)
T ss_dssp             HHHHTCEEEEE-CBCT-TSCBCHHHHHHHCCTTE--EEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTT
T ss_pred             HHHcCCeeEEe-eeCC-CCCCCHHHHHHHhccCC--EEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccc
Confidence            99999999999 8876 45789999999998755  99999999999999999   899999999999999999999976


Q ss_pred             ccC-----CC---CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------ccCCcCcc--
Q 015768          210 MYD-----GR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------DNIPICAS--  269 (400)
Q Consensus       210 ~~~-----~~---~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----------~~~~~~~~--  269 (400)
                      ...     +.   .......+.++++.|++|+++ +|.++|+++.++  +.+........          .....+.+  
T Consensus       282 ~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~  358 (514)
T 3mad_A          282 ILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGY-GAKGTSVILYRR--PDLLHYQYFIAADWPGGLYFSPTFAGSRPGA  358 (514)
T ss_dssp             THHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTC-CCSSCEEEEESS--HHHHTTTCEEESSCTTCSEEESSSCSSCCHH
T ss_pred             cchhHHhcCCCCCcccccCCCCcEEEECchhccC-CCCCeEEEEEeC--HHHhccccccccccCCCcccCCccCCCCchH
Confidence            431     11   222233466889999999964 678899998885  33322110000          00011222  


Q ss_pred             -HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768          270 -IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  348 (400)
Q Consensus       270 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  348 (400)
                       ...+.++...+.  .+++++..+++.++++++.+.|++++.+.+..+. ..++++..+.  .+..++.++|. ++||.+
T Consensus       359 ~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~--~~~~~l~~~L~-~~Gi~v  432 (514)
T 3mad_A          359 LSATAWAAMLSLG--EEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDE--LNIYQVMEEMA-GRGWRL  432 (514)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSS--SCHHHHHHHHH-TTTCBC
T ss_pred             HHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCC--CCHHHHHHHHH-hcCCEe
Confidence             233444444443  3567888899999999999999998766766555 3466666643  36788888886 789988


Q ss_pred             eCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          349 IPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       349 ~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                       +|.  ..++++|++++.  .+++++++++++|+++++++.+.
T Consensus       433 -~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~  472 (514)
T 3mad_A          433 -NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAH  472 (514)
T ss_dssp             -EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHC
T ss_pred             -ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence             433  236789999874  46799999999999999987653

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-30  Score=250.22  Aligned_cols=361  Identities=15%  Similarity=0.117  Sum_probs=247.1

Q ss_pred             HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHH--HHHH-HHHH
Q 015768            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELR--DALV-KKLN   82 (400)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~--~~~a-~~l~   82 (400)
                      +++.......+..+.+..+...+.|+|..+.+..  +|++++++.+.+.+....+|+.   ..+....+  ++++ ++++
T Consensus        24 ~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la  101 (447)
T 3h7f_A           24 APLAEVDPDIAELLAKELGRQRDTLEMIASENFV--PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAK  101 (447)
T ss_dssp             CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCC--CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHH
Confidence            3344445555666655555555778987665543  8999999988875422222321   12444444  5566 7788


Q ss_pred             hhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh-HH----HHhcCcEEEEeccCCCCCCCCCHHHHHH
Q 015768           83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MS----FQMTGVTHILVGPCSSKTLHPDADWLEK  157 (400)
Q Consensus        83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~e~l~~  157 (400)
                      +.+|.+. ..++++|+++|+..++.++.++||+|+++.|+|.++. ..    +...+..++.+ +.+++++.+|++++++
T Consensus       102 ~~~g~~~-~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~  179 (447)
T 3h7f_A          102 ALFGAEF-ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFY-GVDPATHLIDMDAVRA  179 (447)
T ss_dssp             HHHTCSE-EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEE-CCCTTTCSCCHHHHHH
T ss_pred             HHcCCCc-eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEc-CcCcccCCcCHHHHHH
Confidence            7778754 2333788899999999999999999999999997732 11    22234567777 7776666789999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEEEeccccccCC
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~  236 (400)
                      .+...+ +++|++++|+||++.  +   +++|.++|++||+++|+|++|.. +.+.+...... ...++++.|+||+++ 
T Consensus       180 ~i~~~~-~~~i~~~~~~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~-  251 (447)
T 3h7f_A          180 TALEFR-PKVIIAGWSAYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLG-  251 (447)
T ss_dssp             HHHHHC-CSEEEEECSSCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGC-
T ss_pred             HHHhcC-CeEEEEcCCCCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCC-
Confidence            986322 489988889998876  5   89999999999999999999753 33333222111 234688999999984 


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCcC-ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccC-----C
Q 015768          237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL-----G  309 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-----~  309 (400)
                       |+|+||++++   +++.+.+.........+ ++.....++..++.. ..++++++.+++.++++++.+.|++.     +
T Consensus       252 -G~~gG~i~~~---~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g  327 (447)
T 3h7f_A          252 -GGRSGLIVGK---QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAG  327 (447)
T ss_dssp             -CCSCEEEEEC---GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTT
T ss_pred             -CCCeEEEEEC---HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence             7888999988   67777776654433333 344444555555543 23467888999999999999999987     5


Q ss_pred             CCccc-CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CC--CccCCCCeEEEEecc-----CCHHHHHHHHH
Q 015768          310 EGAVK-GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PG--GACGCRGHLRISFGG-----LVEDDCKAAAD  377 (400)
Q Consensus       310 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g--~~~~~~~~iRi~~~~-----~~~~~~~~~~~  377 (400)
                      . .+. ++..++++++.+.....+...+.. +++++||.+.    |+  ..+..++++|+++..     .++++++++++
T Consensus       328 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~  405 (447)
T 3h7f_A          328 V-SVVSGGTDVHLVLVDLRDSPLDGQAAED-LLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVAD  405 (447)
T ss_dssp             C-EEGGGSCSSSEEEEECTTSSCCHHHHHH-HHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHH
T ss_pred             e-EEecCCCCCCEEEEEcCCCCCCHHHHHH-HHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHH
Confidence            4 443 334477888888654435555554 5567899998    55  333456889998753     47899999999


Q ss_pred             HHHHHHHHHh
Q 015768          378 RLRRGLEELV  387 (400)
Q Consensus       378 ~l~~~l~~~~  387 (400)
                      .|.+++.+..
T Consensus       406 ~l~~~l~~~~  415 (447)
T 3h7f_A          406 IIATALATGS  415 (447)
T ss_dssp             HHHHHHHSGG
T ss_pred             HHHHHHhccC
Confidence            9999987654

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.9e-30  Score=247.30  Aligned_cols=360  Identities=15%  Similarity=0.120  Sum_probs=234.5

Q ss_pred             HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHH
Q 015768            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLN   82 (400)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~   82 (400)
                      .++.......+..+....+...+.++|..+.+..  ++++++++.+.+.+....+|+      .....+.+++...++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   88 (425)
T 3ecd_A           11 QSLAERDASVRGAILKELERQQSQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVK   88 (425)
T ss_dssp             CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHH
T ss_pred             HHHHhhCHHHHHHHHHHHHHHhcceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHH
Confidence            3444443333444433333445678887776554  899999999888542111121      11111233333336666


Q ss_pred             hhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh-H--HHHhcCc--EEEEeccCCCCCCCCCHHHHHH
Q 015768           83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-M--SFQMTGV--THILVGPCSSKTLHPDADWLEK  157 (400)
Q Consensus        83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~-~--~~~~~g~--~~~~~~~~~~~~~~~~~e~l~~  157 (400)
                      +.+|.+. ..++++|+++++..++.++.++||+|+++.|+|++.. .  .....|.  .++.+ +.+++++.+|++++++
T Consensus        89 ~~~~~~~-~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~  166 (425)
T 3ecd_A           89 RLFNAGH-ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQY-GVSRDTMLIDYDQVEA  166 (425)
T ss_dssp             HHHTCSE-EECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEE-CCCTTTSSCCHHHHHH
T ss_pred             HHhCCCC-ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeec-CCCcccCccCHHHHHH
Confidence            6667654 2345888999999999999999999999999998722 2  2223343  66677 7776667889999999


Q ss_pred             hhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCCCccccCCCcEEEEeccccccC
Q 015768          158 TLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       158 ~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g  235 (400)
                      .++ .++  ++|++++|+||  ...+   +++|.++|++||+++|+||+|+... +.+...... ...+++++|+||++ 
T Consensus       167 ~i~~~~~--~~v~~~~~~~~--~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~-~~~di~~~s~sK~l-  237 (425)
T 3ecd_A          167 LAQQHKP--SLIIAGFSAYP--RKLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV-EHAHVVTSTTHKTL-  237 (425)
T ss_dssp             HHHHHCC--SEEEEECSCCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-GTCSEEEEESSGGG-
T ss_pred             HHhhcCC--cEEEEccccCC--CcCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCch-hcCcEEEecCCccc-
Confidence            997 454  99999988885  4566   8899999999999999999965433 333222211 12458899999998 


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCc-CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPI-CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV  313 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  313 (400)
                       +|.|+||++.++  +++.+.+......... +++.....++..++.. ..++++++.+++.++++++.+.|++.+. .+
T Consensus       238 -~g~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~  313 (425)
T 3ecd_A          238 -RGPRGGFVLTND--EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGV-DL  313 (425)
T ss_dssp             -CCCSCEEEEESC--HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EE
T ss_pred             -CCCCcEEEEeCC--HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC-ee
Confidence             467899999885  5677777665433222 3444444444444432 3356678888999999999999998664 44


Q ss_pred             cCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCcc--CCCCeEEEEecc-----CCHHHHHHHHHHHHH
Q 015768          314 KGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGAC--GCRGHLRISFGG-----LVEDDCKAAADRLRR  381 (400)
Q Consensus       314 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~--~~~~~iRi~~~~-----~~~~~~~~~~~~l~~  381 (400)
                      ..+ ..++++|+.++....+...+...| +++||.+.    ||..+  ..++++|++++.     .++++++++++.|++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~  392 (425)
T 3ecd_A          314 VTGGTDNHLLLVDLRPKGLKGAQVEQAL-ERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE  392 (425)
T ss_dssp             GGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCCceEEEEEeCCCCCCHHHHHHHH-HHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence            433 357888888865434566676655 58899999    44321  134689999553     348999999999999


Q ss_pred             HHHHH
Q 015768          382 GLEEL  386 (400)
Q Consensus       382 ~l~~~  386 (400)
                      ++++.
T Consensus       393 ~l~~~  397 (425)
T 3ecd_A          393 VFEAL  397 (425)
T ss_dssp             HHHHH
T ss_pred             HHhcc
Confidence            99886

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.98  E-value=1.2e-31  Score=256.15  Aligned_cols=338  Identities=12%  Similarity=0.071  Sum_probs=229.8

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  +.++ .||++++++.+.+.+.....| +.....++++.+++    .++ .++++++++|+++|++
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~----~~~-~~~~v~~~~~Gsea~~  123 (429)
T 3k28_A           50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIE----RVP-SIEIVRMVNSGTEATM  123 (429)
T ss_dssp             TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHH----HST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHH----hCC-CCCEEEEeCChHHHHH
Confidence            4578899999886  4555 589999999998876433223 33333444444444    444 5789999999999999


Q ss_pred             HHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCcEEEEeccCCC-CCCC------------CCHHHHHHhhccC-CCCe
Q 015768          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSS-KTLH------------PDADWLEKTLETK-PTPK  166 (400)
Q Consensus       104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~------------~~~e~l~~~l~~~-~~~~  166 (400)
                      .+++.+..  ++++|++.+|+|++....... .|.....+ +... .+..            -|++++++.++.. ..++
T Consensus       124 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~  202 (429)
T 3k28_A          124 SALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATL-GLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIA  202 (429)
T ss_dssp             HHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC------CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEE
T ss_pred             HHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCccccc-CCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEE
Confidence            99988764  668999999999876543322 22211111 1111 1110            1789999988732 1235


Q ss_pred             EEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768          167 LVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       167 ~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      +|++..++|++|.+ .+.+++++|.++|++||+++|+||+|.++ ..+........+....+.++||.+| +|+|+||++
T Consensus       203 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~  280 (429)
T 3k28_A          203 CVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIG-GGLPVGAYG  280 (429)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGG-TTSCCEEEE
T ss_pred             EEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhc-CCCCeEEEE
Confidence            56555556666665 46888999999999999999999999877 4442211111111122447899997 699999999


Q ss_pred             ccCCcHHHHHHHHHhh---ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCC
Q 015768          246 YPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEG  318 (400)
Q Consensus       246 ~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~  318 (400)
                      ++   +++++.+....   ...+++.+++++.++.++|+..+   ++..++++++++++++.|+++    +......+. 
T Consensus       281 ~~---~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-  353 (429)
T 3k28_A          281 GK---AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT---PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRA-  353 (429)
T ss_dssp             EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-
T ss_pred             Ec---HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEee-
Confidence            98   78877765422   34577889999999999998643   466677777777777777653    443444444 


Q ss_pred             ceEEEeeCCCCCC------------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       319 ~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.++++.+.....            ...+++..++ ++||.+.|+.    .+.+|+++. .+++++++++++|+++++++
T Consensus       354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~r~~~~-~t~e~i~~~l~~l~~~l~~~  427 (429)
T 3k28_A          354 GSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ----FEGLFLSTV-HSDADIEATIAAAEIAMSKL  427 (429)
T ss_dssp             TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCBCCCTT-CCHHHHHHHHHHHHHHHHTC
T ss_pred             ccEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC----CCCEEEECC-CCHHHHHHHHHHHHHHHHHH
Confidence            5666666543210            1256777776 7899999863    467888776 49999999999999998764

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.98  E-value=3.4e-31  Score=247.25  Aligned_cols=324  Identities=13%  Similarity=0.089  Sum_probs=232.0

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHHhhcCCCCC-c-EEEeCChHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFV  103 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~-i~~~~g~t~a~~  103 (400)
                      .+.+..+  +.++|+.+++++.+.+.+....      ......+..++++++++.+++.+|++++ + +++|+|+|++++
T Consensus         5 ~~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~   82 (362)
T 2c0r_A            5 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA   82 (362)
T ss_dssp             CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred             eeeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence            3455554  3578899999999988542110      0101223455788899999888898764 6 467799999999


Q ss_pred             HHHHHhcCCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCCC---CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768          104 NIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (400)
Q Consensus       104 ~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG  178 (400)
                      .++.++.+|||+|++..+.|++.  ...++..| +++.+ +.+.   .+..++.+.++  ++++  +++|++++|+||||
T Consensus        83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v-~~~~~~~~~~~~~~~~~~--i~~~--t~~v~~~~~~n~tG  156 (362)
T 2c0r_A           83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVA-ASSEASNYMTLPKLQEIQ--LQDN--AAYLHLTSNETIEG  156 (362)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEE-EECGGGTTCSCCCGGGCC--CCTT--EEEEEEESEETTTT
T ss_pred             HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEE-ecccccccccCCCHHHcc--cCCC--cCEEEEeCCcCccc
Confidence            99999999999999887776553  35667789 88888 7652   33345665553  5544  49999999999999


Q ss_pred             cC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          179 TY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       179 ~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      .+ .+   +++|      +|+++++|++|+.+..   +....  +.++++.|+||++|++|  +||++.+   +++++.+
T Consensus       157 ~~~~~---l~~i------~~~~vivD~a~~~~~~---~~~~~--~~d~~~~s~~K~~g~~G--~G~l~~~---~~~~~~l  217 (362)
T 2c0r_A          157 AQFKA---FPDT------GSVPLIGDMSSDILSR---PFDLN--QFGLVYAGAQKNLGPSG--VTVVIVR---EDLVAES  217 (362)
T ss_dssp             EECSS---CCCC------TTSCEEEECTTTTTSS---CCCGG--GCSEEEEETTTTTCCSS--CEEEEEE---GGGSSSC
T ss_pred             eeccc---cccc------CCCEEEEEChhhccCC---ccchh--HCcEEEEeccccccCcC--cEEEEEc---HHHHhhc
Confidence            96 45   5554      8999999999986532   11111  12588899999998777  8999988   4554443


Q ss_pred             HHh------------hccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-cccC---CCCc
Q 015768          258 LKV------------QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVKG---GEGA  319 (400)
Q Consensus       258 ~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~---~~~~  319 (400)
                      ...            .....++++.+.+.++..+++...+  .++++.++++++++++.+.|++++.+ .+..   ..+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  297 (362)
T 2c0r_A          218 PKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSD  297 (362)
T ss_dssp             CTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCS
T ss_pred             cccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCC
Confidence            321            1123467888888888888874222  56888899999999999999988732 4322   1234


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .++++.++.. .+..+++.+| .++||.+.+|..+  .+++|+|++. +++++++++++.|+++++++
T Consensus       298 ~~~~~~~~~~-~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~  361 (362)
T 2c0r_A          298 MNITFRLASE-ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRSR  361 (362)
T ss_dssp             SEEEEECSCH-HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCc-chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            5677887642 2466788876 4789998887655  4689999987 78999999999999887654

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.98  E-value=1e-30  Score=252.44  Aligned_cols=326  Identities=14%  Similarity=0.110  Sum_probs=226.8

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE---EEE
Q 015768           46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD----AGDS---VVM  118 (400)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~----~gd~---vlv  118 (400)
                      +.+.+++.+.+..+ ...|++..+..++++++++++    +  .+++++|+|+|+|++.++.++.+    +||+   |++
T Consensus        55 ~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~----~--~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv  127 (467)
T 1ax4_A           55 NAMSDHQWAAMITG-DEAYAGSRNYYDLKDKAKELF----N--YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFI  127 (467)
T ss_dssp             CCEEHHHHHHHHTC-CCCSSSCHHHHHHHHHHHHHH----C--CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEE
T ss_pred             HHHHHHHHHHHhhc-ccccccCccHHHHHHHHHHHc----C--CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEE
Confidence            56667777766544 335766667788899988887    4  37899999999999999999988    9998   999


Q ss_pred             eCCCccchhHHHHhcCcEEEEeccCCC---------CCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHHHH
Q 015768          119 FAPYYFNSYMSFQMTGVTHILVGPCSS---------KTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPERLL  186 (400)
Q Consensus       119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~npt-G~~~~~~~l  186 (400)
                      +.+.|..+...+...|..++.+ +.+.         .++.+|++.|++.+++.  ..+++|++++|+||+ |.+++.+++
T Consensus       128 ~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l  206 (467)
T 1ax4_A          128 SNFHFDTTAAHVELNGCKAINI-VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNL  206 (467)
T ss_dssp             ESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHH
T ss_pred             eccccchhhHHHhccCCceecc-cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHH
Confidence            8555566677888889888776 4321         13467999999999742  125999999999999 899999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccc-c---------ccCCCCccccC----CCcEEEEeccccccCCC-cceeEEEEccCCcH
Q 015768          187 KRISDLCKAAGSWLVVDNTYEY-F---------MYDGRKHCCVE----GDHVVNLFSFSKAYGMM-GWRVGYIAYPSEVE  251 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~-~---------~~~~~~~~~~~----~~~~i~~~s~sK~~g~~-g~~~G~i~~~~~~~  251 (400)
                      ++|.++|++||+++|+|+++.. .         .+.+.......    ...++++.|+||.+|++ |   |+++.++  +
T Consensus       207 ~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~d--~  281 (467)
T 1ax4_A          207 KEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG---GLVAIRD--N  281 (467)
T ss_dssp             HHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC---EEEEESS--C
T ss_pred             HHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc---eEEEeCC--H
Confidence            9999999999999999998664 1         12222111110    11236678999999755 3   7777764  5


Q ss_pred             -HHHHHHHHhhc----cCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee
Q 015768          252 -GFATQLLKVQD----NIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR  325 (400)
Q Consensus       252 -~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  325 (400)
                       ++++.+.....    ...+ ..+.....++..+++...+  .+..++..++++.+.+.|++. .+.+..+.+++++|+.
T Consensus       282 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~  358 (467)
T 1ax4_A          282 EEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRLREA-GIPIQYPTGGHAVFVD  358 (467)
T ss_dssp             HHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEE
T ss_pred             HHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHhC-CCCcccCCCceEEEEe
Confidence             67666654322    1122 2233333333334543222  123333446677788888774 3456567778899988


Q ss_pred             -------CCCCCCCHHHHHHHHHHhcCeEEeC-CCcc-------C-----CCCeEEEEec-c-CCHHHHHHHHHHHHHHH
Q 015768          326 -------LPEKHLDDFEVVRWLAHRHGVVVIP-GGAC-------G-----CRGHLRISFG-G-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       326 -------~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~-------~-----~~~~iRi~~~-~-~~~~~~~~~~~~l~~~l  383 (400)
                             ++....+..++..+|+.++||.+.| |..+       +     ..+++||+++ . ++++++++++++|++++
T Consensus       359 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~  438 (467)
T 1ax4_A          359 CKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLK  438 (467)
T ss_dssp             STTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTH
T ss_pred             hhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence                   4322224677888885689999998 5432       1     1379999998 3 68999999999999999


Q ss_pred             HHHh
Q 015768          384 EELV  387 (400)
Q Consensus       384 ~~~~  387 (400)
                      ++..
T Consensus       439 ~~~~  442 (467)
T 1ax4_A          439 EKFA  442 (467)
T ss_dssp             HHHT
T ss_pred             Hhhh
Confidence            8754

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.97  E-value=9.6e-30  Score=238.45  Aligned_cols=313  Identities=12%  Similarity=0.086  Sum_probs=228.5

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEe
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL---CDAGDSVVMF  119 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l---~~~gd~vlv~  119 (400)
                      ++|+++++++.+.+.+..   |.+.....++++.+++++    |.+  ++++++|+++|+..++.++   .++||+|+++
T Consensus        10 ~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~----~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~   80 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFL----GVK--HALVFNSATSALLTLYRNFSEFSADRNEIITT   80 (375)
T ss_dssp             CCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred             CCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence            467999999999987532   334445667778877777    544  8999999999999999999   8899999999


Q ss_pred             CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768          120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (400)
Q Consensus       120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (400)
                      .|+|+++...++..|++++.+ +.++++ .+|++.+++.+++++  ++|+++++   ||.+.+   +++|.++|++||++
T Consensus        81 ~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~~--~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~  150 (375)
T 2fnu_A           81 PISFVATANMLLESGYTPVFA-GIKNDG-NIDELALEKLINERT--KAIVSVDY---AGKSVE---VESVQKLCKKHSLS  150 (375)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEC-CBCTTS-SBCGGGSGGGCCTTE--EEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred             CCccHhHHHHHHHCCCEEEEe-ccCCCC-CCCHHHHHhhcCcCc--eEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence            999999999999999999999 887766 789999999987654  88887765   999999   89999999999999


Q ss_pred             EEEcccccccccCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEc-cCCcHHHHHHHHHhhccC------------
Q 015768          200 LVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNI------------  264 (400)
Q Consensus       200 li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~-~~~~~~~~~~l~~~~~~~------------  264 (400)
                      +|+|++|+.+....... ....+ ++++.|+|  |++|. |  +|+++. ++  +++++++.......            
T Consensus       151 li~D~a~~~~~~~~~~~-~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (375)
T 2fnu_A          151 FLSDSSHALGSEYQNKK-VGGFA-LASVFSFHAIKPITT-A--EGGAVVTND--SELHEKMKLFRSHGMLKKDFFEGEVK  223 (375)
T ss_dssp             EEEECTTCTTCEETTEE-TTSSS-SEEEEECCTTSSSCC-S--SCEEEEESC--HHHHHHHHHHTBTTEEESSSSCEEES
T ss_pred             EEEECccccCCeECCee-ccccC-CeEEEeCCCCCCccc-c--CceEEEeCC--HHHHHHHHHHHhcCCccccccccccc
Confidence            99999998654321111 11111 46677777  99974 5  577665 43  56777776654211            


Q ss_pred             --C--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-----CCceEEEeeCCCCCC-CHH
Q 015768          265 --P--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIYLWARLPEKHL-DDF  334 (400)
Q Consensus       265 --~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~  334 (400)
                        .  +..+.+...+....+    +++++..++.+++++++.+.|++++++.+..+     ...+++++.++.... +..
T Consensus       224 ~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (375)
T 2fnu_A          224 SIGHNFRLNEIQSALGLSQL----KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKK  299 (375)
T ss_dssp             SCCCBCCCCHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHH
T ss_pred             cccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHH
Confidence              1  123333333322222    33567788889999999999999865455443     123445677764222 467


Q ss_pred             HHHHHHHHhcCeEEeCCCc-------cC-------C-------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          335 EVVRWLAHRHGVVVIPGGA-------CG-------C-------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       335 ~~~~~l~~~~gi~v~~g~~-------~~-------~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++...|. ++||.+..+..       |+       .       .+++||+++. ++++++++++++|+++++++
T Consensus       300 ~l~~~L~-~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~  372 (375)
T 2fnu_A          300 LILESLH-KRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF  372 (375)
T ss_dssp             HHHHHHH-HTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            7888775 78999984321       10       1       2679999987 79999999999999998764

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.97  E-value=4.3e-30  Score=242.98  Aligned_cols=287  Identities=20%  Similarity=0.192  Sum_probs=213.8

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~  143 (400)
                      ......++++++++++.+|.  +++++++|+++|+..++.++.++||+|+++.|+|+++...++    ..|++++.+ |.
T Consensus        77 r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~  153 (414)
T 3ndn_A           77 RYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFV-DG  153 (414)
T ss_dssp             TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CT
T ss_pred             CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEe-CC
Confidence            33445677777777777774  678999999999999999999999999999999999877664    489999998 65


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                      +      |++++++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+.+.....    ...+.
T Consensus       154 ~------d~~~l~~ai~~~t--~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~----~~~g~  218 (414)
T 3ndn_A          154 D------DLSQWERALSVPT--QAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQG----FPLGV  218 (414)
T ss_dssp             T------CHHHHHHHTSSCC--SEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCC----GGGTC
T ss_pred             C------CHHHHHHhcCCCC--eEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCCc----hhcCC
Confidence            4      7899999998766  99999999999999999   88999999999999999999985543221    23345


Q ss_pred             EEEEeccccccCCCc-ceeEEEEccCCcHHHHH-HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  301 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  301 (400)
                      ++++.|+||++|.+| +++|+++.+   ++.+. .+.........+.++...+++...++.    +..+.+++.++++.+
T Consensus       219 div~~S~sK~l~~~G~~~~G~vv~~---~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l  291 (414)
T 3ndn_A          219 DVVVYSGTKHIDGQGRVLGGAILGD---REYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET----LAIRVQHSNASAQRI  291 (414)
T ss_dssp             SEEEEETTTTTTCSSCCCCEEEEEC---HHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHH
T ss_pred             CeEeccCCccccCCCCceEEEEEEC---HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence            789999999998667 889999998   55544 555444333444566655555555543    567777888889999


Q ss_pred             HHHhccCCCCc-ccCCC----------------CceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccC-----
Q 015768          302 REALSPLGEGA-VKGGE----------------GAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACG-----  355 (400)
Q Consensus       302 ~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~-----  355 (400)
                      .+.|++.+.+. +..|.                .+.++++.++..    ..+..+++..+ +..++.+..|..+.     
T Consensus       292 ~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p  370 (414)
T 3ndn_A          292 AEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLGDAKSLVTHP  370 (414)
T ss_dssp             HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCSCSSCEEECG
T ss_pred             HHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCCCCCceeeCc
Confidence            99998876532 22221                367888888642    11245566555 35677777776441     


Q ss_pred             ------------------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          356 ------------------CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       356 ------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                                        .++.+|||++.   |+.+++++.|++++
T Consensus       371 ~~~~~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al  413 (414)
T 3ndn_A          371 ATTTHRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL  413 (414)
T ss_dssp             GGTTTCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence                              25789999997   55666777777765

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.97  E-value=1.4e-31  Score=249.62  Aligned_cols=325  Identities=12%  Similarity=0.084  Sum_probs=232.4

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCC---CCCCCCC---CCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCCh-HHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDP---SISKYGA---DEGLPELRDALVKKLNQENKLY-KSSVMVTAGA-NQAF  102 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~-t~a~  102 (400)
                      ..+++..|..  ++|+.+++++.+.+.+.   ....|+.   ..+..++.+++.+++++.+|++ ++++++++|+ |+|+
T Consensus         3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al   80 (360)
T 1w23_A            3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF   80 (360)
T ss_dssp             CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHH
Confidence            3566666643  67899999999988642   1112222   2334456777777777777886 5799999998 9999


Q ss_pred             HHHHHHhcCC---CCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH-hhccCCCCeEEEEeCCCCCC
Q 015768          103 VNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPS  177 (400)
Q Consensus       103 ~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~-~l~~~~~~~~v~l~~p~npt  177 (400)
                      ..++.++..+   ||.|+++.++|.. ...++..| +++.+ |.++ ++ .+|++++++ .+++++  |+|++++|+|||
T Consensus        81 ~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v-~~~~~~~-~~d~~~l~~~~i~~~~--k~v~~~~~~npt  154 (360)
T 1w23_A           81 TMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIA-ASTKANS-YQSIPDFSEFQLNEND--AYLHITSNNTIY  154 (360)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEE-EECGGGT-SCSCCCGGGCCCCTTE--EEEEEESEETTT
T ss_pred             HHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEe-ecccccC-cCCccchHhhccCCCC--CEEEEeCCCCCc
Confidence            9999999865   5677777777754 34467789 99999 8775 44 368889988 776554  999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      |.+++  ++.+      +||+++|+|++|+.+...   ......  +++++|+||.+|++|  +||++.+   +++++++
T Consensus       155 G~~~~--~i~~------~~~~~li~D~a~~~~~~~---~~~~~~--di~~~s~sK~~~~~G--~G~~~~~---~~~~~~~  216 (360)
T 1w23_A          155 GTQYQ--NFPE------INHAPLIADMSSDILSRP---LKVNQF--GMIYAGAQKNLGPSG--VTVVIVK---KDLLNTK  216 (360)
T ss_dssp             TEECS--SCCC------CCSSCEEEECTTTTTSSC---CCGGGC--SEEEEETTTTTSCTT--CEEEEEE---HHHHCSC
T ss_pred             ceecc--cccc------cCCceEEEechhhcCCCC---cCcccC--CEEEEEcccccCCCC--cEEEEEc---HHHHhhc
Confidence            99987  2332      799999999999865432   111112  488999999998555  8999988   6666554


Q ss_pred             HHhh------------ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-ccc-CC--CCc
Q 015768          258 LKVQ------------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVK-GG--EGA  319 (400)
Q Consensus       258 ~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~-~~--~~~  319 (400)
                      ....            .....+++...+.++..+++...+  +++++.++++++++++.+.|++++.+ ... .+  .++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  296 (360)
T 1w23_A          217 VEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSL  296 (360)
T ss_dssp             CTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCS
T ss_pred             ccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccC
Confidence            3321            011234566666666666653222  56788889999999999999988743 322 12  335


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .++|+.++.. .+..++.++|. ++||.+.+|..+  ++++|++++. ++++++++++++|++++++
T Consensus       297 ~~~~~~~~~~-~~~~~~~~~l~-~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~~  359 (360)
T 1w23_A          297 MNVTFNLRNE-ELNQQFLAKAK-EQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             SEEEEECSSH-HHHHHHHHHHH-HTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCC-ccHHHHHHHHH-HCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence            5889998742 13456777764 799999887653  6899999997 7899999999999988753

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.97  E-value=1.3e-30  Score=248.24  Aligned_cols=358  Identities=14%  Similarity=0.086  Sum_probs=233.3

Q ss_pred             hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcC
Q 015768           13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      ......+..+.+..+...+.+.+..+.+.  .||++++++.+.+.+....+      |......+.+++.+.+++.+.+|
T Consensus        13 ~~~~~i~~~~~~~~~~~~~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~   90 (420)
T 3gbx_A           13 DYDAELWQAMEQEKVRQEEHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG   90 (420)
T ss_dssp             HHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred             hcCHHHHHHHHHHHHhhhcceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence            34333444443333333355666555444  58999999998884422111      22223334556656677777778


Q ss_pred             CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhc--CcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768           87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus        87 ~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      ++++++++++| ++++..++.++.++||+|+++.|+|.++.   ..+...  +...+.+ +.++ ++.+|++++++.+++
T Consensus        91 ~~~~~v~~~sG-s~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~d~~~l~~~i~~  167 (420)
T 3gbx_A           91 ADYANVQPHSG-SQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPY-GIDE-SGKIDYDEMAKLAKE  167 (420)
T ss_dssp             CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEE-EECT-TCSCCHHHHHHHHHH
T ss_pred             CCCceeEecCc-HHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEec-cCCc-cCCcCHHHHHHHHHh
Confidence            87766766555 78999999999999999999999997743   222222  3455556 5553 346899999999985


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccCCCcce
Q 015768          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~~  240 (400)
                      +. +++|++++|+||+  ..+   +++|.++|++||+++|+||+|+.+.. .+. ........+++++|+||+++  |.+
T Consensus       168 ~~-~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~di~~~s~sK~~~--g~~  238 (420)
T 3gbx_A          168 HK-PKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGV-YPNPVPHAHVVTTTTHKTLA--GPR  238 (420)
T ss_dssp             HC-CSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTS-SCCSTTTSSEEEEESSGGGC--SCS
T ss_pred             cC-CeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceeccc-CCcccccCCEEEeecccCCC--CCC
Confidence            32 4999998888863  667   88999999999999999999864433 322 11222236699999999995  455


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCc-CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-C
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPI-CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-E  317 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~  317 (400)
                      .||++.++..+++.+.+......... +++...+.++..++.. ..++++++.+++.++++++.+.|++.+. .+..+ .
T Consensus       239 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~  317 (420)
T 3gbx_A          239 GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGY-KVVSGGT  317 (420)
T ss_dssp             CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSC
T ss_pred             ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCC-eeccCCC
Confidence            69999983212677777655433222 3344444444444432 3466788889999999999999988654 44432 4


Q ss_pred             CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-------CCccCCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHH
Q 015768          318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-------GGACGCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-------g~~~~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~  385 (400)
                      .++++|+.++....+...+...| +++||.+.+       +..+ .+..+||+++.     .++++++++++.|++++.+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~-~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~  395 (420)
T 3gbx_A          318 ENHLFLLDLVDKNLTGKEADAAL-GRANITVNKNSVPNDPKSPF-VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN  395 (420)
T ss_dssp             SSSEEEEECGGGTCCHHHHHHHH-HHTTEECEEECCTTCSSCTT-TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEEcCCCCCCHHHHHHHH-HHCCcEeccccCCCCccccC-CCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence            57888888765434566666655 589999988       3333 34569999864     3579999999999998876


Q ss_pred             Hh
Q 015768          386 LV  387 (400)
Q Consensus       386 ~~  387 (400)
                      ..
T Consensus       396 ~~  397 (420)
T 3gbx_A          396 IN  397 (420)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.97  E-value=3e-30  Score=246.28  Aligned_cols=332  Identities=14%  Similarity=0.110  Sum_probs=226.9

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  ++++ .+|++++++.+.+.+...  |+.   ..+.+.++++++.+.++ .++++++++|+++|++
T Consensus        49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~  122 (427)
T 3fq8_A           49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP-SIEMVRFVNSGTEACM  122 (427)
T ss_dssp             TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence            3568899999886  4454 589999999999876422  322   45677888888888776 6899999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHHhc-Cc-------------------EEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------------THILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~-------------------~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      .+++...  ..++.|++..|+|++........ |.                   .++.+ |.+      |++++++.++.
T Consensus       123 ~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------d~~~le~~l~~  195 (427)
T 3fq8_A          123 AVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT-PYN------DLEAVKALFAE  195 (427)
T ss_dssp             HHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEE-ETT------CHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeec-CCC------CHHHHHHHHHh
Confidence            9995442  23578999999998755432221 11                   12222 211      78999999875


Q ss_pred             C-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc
Q 015768          162 K-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       162 ~-~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  239 (400)
                      . ..+++|+++.++|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+........+....+.|+||+++ +|+
T Consensus       196 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~  273 (427)
T 3fq8_A          196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIG-GGL  273 (427)
T ss_dssp             STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGG-TTS
T ss_pred             CCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhh-CCc
Confidence            3 2246777666677788765 4667999999999999999999999977 4332211111111122458899998 899


Q ss_pred             eeEEEEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCc
Q 015768          240 RVGYIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGA  312 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~  312 (400)
                      |+||++.+   +++++.+...   ....+++.+++++.++.++++...+  +++.++++++.+++++.|+    .++...
T Consensus       274 ~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  348 (427)
T 3fq8_A          274 PVGAYGGK---REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ--PGTYEYLDQITKRLSDGLLAIAQETGHAA  348 (427)
T ss_dssp             SCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ceEEEEEc---HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence            99999998   7888777642   2345677899999999988863111  2333444444455444444    344322


Q ss_pred             ccCCCCceEEEeeCCCCCCC------------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKHLD------------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      ...+ .+.++++.++.....            ..+++..++ ++||.+.++..    ..+|+++. .+++++++++++|+
T Consensus       349 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~----~r~~~~~~-~t~e~i~~~l~~l~  421 (427)
T 3fq8_A          349 CGGQ-VSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF----EAGFTSLA-HTEEDIDATLAAAR  421 (427)
T ss_dssp             EEEE-ETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTT-CCHHHHHHHHHHHH
T ss_pred             EEEE-eeeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCcEEecCCC----CCEEeeCc-CCHHHHHHHHHHHH
Confidence            3333 377788887643212            346777775 78999998652    34555544 59999999999999


Q ss_pred             HHHHH
Q 015768          381 RGLEE  385 (400)
Q Consensus       381 ~~l~~  385 (400)
                      +++++
T Consensus       422 ~~l~~  426 (427)
T 3fq8_A          422 TVMSA  426 (427)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99875

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.97  E-value=1.9e-29  Score=244.80  Aligned_cols=348  Identities=15%  Similarity=0.057  Sum_probs=254.2

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEE---EeCChHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVM---VTAGANQAF  102 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~---~~~g~t~a~  102 (400)
                      ++++.+++.. .....+++.+.+++.+.+..+ ...|...++..++++++.+++++.+|++  ++++.   +|+|+++++
T Consensus        53 ~gnp~~~l~s-~~t~~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~  130 (502)
T 3hbx_A           53 DGNPRLNLAS-FVTTWMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAI  130 (502)
T ss_dssp             SCCGGGBTTC-CSCCCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHH
T ss_pred             CCCCCceecc-ccCCCCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHH
Confidence            3444444433 122346788999999887664 3334444557789999999999999987  55544   589999999


Q ss_pred             HHHHHHhcCC--------CC-----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEE
Q 015768          103 VNIVLTLCDA--------GD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus       103 ~~~~~~l~~~--------gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~  169 (400)
                      ..++.++..+        |+     +|+++.++|.++...++..|++++.+ |.+++++.+|++++++.+.+++  ++|+
T Consensus       131 ~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~t--~~v~  207 (502)
T 3hbx_A          131 MLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEV-KLSEGYYVMDPQQAVDMVDENT--ICVA  207 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEE-CCBTTBCSCCHHHHHHHCCTTE--EEEE
T ss_pred             HHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEE-ecCCCcCcCCHHHHHHHHhhCC--EEEE
Confidence            9999888654        76     99999999999999999999999999 8877657899999999998765  8999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEcccccccc----cCCCCccccCCCcEEEEeccccccCCCcc
Q 015768          170 VVNPGNPSGTYIPERLLKRISDLCKAA------GSWLVVDNTYEYFM----YDGRKHCCVEGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       170 l~~p~nptG~~~~~~~l~~i~~l~~~~------~~~li~D~a~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  239 (400)
                      +++|+||||.+.|   +++|.++|+++      |+++++|++|+.+.    ....+......+.+++..|.+|+++ ++.
T Consensus       208 ~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~-~p~  283 (502)
T 3hbx_A          208 AILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYA  283 (502)
T ss_dssp             EEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCS
T ss_pred             EecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccC-CCC
Confidence            9999999999999   88889999998      99999999998664    2222222223467788899999884 567


Q ss_pred             eeEEEEccCCcHHHHHHHHHhh-cc---------CCcCc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQ-DN---------IPICA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~-~~---------~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      ++|+++.++  ++.+....... ..         ..++.   ..+.++++...+.  .+.+.++.++..++++++.+.|+
T Consensus       284 g~G~~~~~~--~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~  359 (502)
T 3hbx_A          284 GIGWVIWRN--KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--HEGYRNVMENCRENMIVLREGLE  359 (502)
T ss_dssp             SCEEEEESS--GGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeC--HHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            789887765  33321111100 00         01111   3344444444443  34467888889999999999999


Q ss_pred             cCCCCcccCC-CCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCcc---CCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          307 PLGEGAVKGG-EGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       307 ~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                      +++.+.+..+ ...+++.++++.. ..+..++.+.|. ++||.+.....+   ....++||+++. +++++++.+++.|+
T Consensus       360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~  438 (502)
T 3hbx_A          360 KTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLR-RYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIE  438 (502)
T ss_dssp             TTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHH-TTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             hCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHH-hCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHH
Confidence            9986666655 3467777787642 235668888775 889987432222   234689999987 89999999999999


Q ss_pred             HHHHHHhcc
Q 015768          381 RGLEELVKD  389 (400)
Q Consensus       381 ~~l~~~~~~  389 (400)
                      ++++.+.+.
T Consensus       439 ~~l~~l~~~  447 (502)
T 3hbx_A          439 KVMRELDEL  447 (502)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHhC
Confidence            999988653

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.97  E-value=4.1e-31  Score=246.37  Aligned_cols=330  Identities=11%  Similarity=0.036  Sum_probs=228.7

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      +......+..+.++++++|++++++.+.+..   ..|++..+..++++.+++++    +.+  ..++++|+++++..++.
T Consensus        11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~----~~~--~~i~~~~g~~a~~~a~~   81 (359)
T 3pj0_A           11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKIL----GKQ--SAVFFPSGTMAQQIALR   81 (359)
T ss_dssp             HTCSEESSSSSCCBHHHHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHH
T ss_pred             HhcchhhcCCCccccCCCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHH
Confidence            3355667777777778889999888775443   34655556677777777776    543  34666888999999999


Q ss_pred             HhcCCCCE--EEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC-ccCC
Q 015768          108 TLCDAGDS--VVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYI  181 (400)
Q Consensus       108 ~l~~~gd~--vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt-G~~~  181 (400)
                      ++.++||+  |+++.++|....   ......|++++.+ |.+  .+.+|++++++. .++  +++|++++|+||+ |.++
T Consensus        82 ~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~-~~~--~~~v~~~~p~n~~~G~~~  155 (359)
T 3pj0_A           82 IWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLL-GTA--NQLLTIDDIKSL-REP--VSSVLIELPQREIGGQLP  155 (359)
T ss_dssp             HHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEEC-SCT--TSCCCHHHHHTC-SSC--CSEEEEESSBGGGTSBCC
T ss_pred             HHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEec-CCc--CCCcCHHHHHhc-cCC--ceEEEEEecccCCCcccC
Confidence            99988886  555555554332   1225579999988 763  346899999988 444  5999999999988 7999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~  259 (400)
                      +.+++++|.++|++||+++|+|++|..+..  .+..........++++.|+||+++.++ + |+++.+   +++++++..
T Consensus       156 ~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~-g-g~~~~~---~~l~~~~~~  230 (359)
T 3pj0_A          156 AFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIA-G-AILAGN---DDFVQEAKI  230 (359)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSS-C-EEEEEC---HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcc-e-EEEECC---HHHHHHHHH
Confidence            999999999999999999999999875442  111111111234466779999987442 2 778877   788888876


Q ss_pred             hhccCC--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCC-CCHHH
Q 015768          260 VQDNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKH-LDDFE  335 (400)
Q Consensus       260 ~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~  335 (400)
                      ......  .........++..+++..    .+..+++.++++++.+.|++++++.+. .+..++++|+.++... .+..+
T Consensus       231 ~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (359)
T 3pj0_A          231 WKRRYGGDLISLYPYILSADYYFEKR----IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAI  306 (359)
T ss_dssp             HHHHTTCCCSCCHHHHHHHHHHHHHH----GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHH
T ss_pred             HHHHhCCCcchhHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHH
Confidence            443222  112222333333444421    244455778888999999998665663 4556788888876421 12456


Q ss_pred             HHHHHHHhcCeEEeCCCccCC--CCeEEEEecc----CCHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGG----LVEDDCKAAADRLRRG  382 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~----~~~~~~~~~~~~l~~~  382 (400)
                      +.+.| .++||.+.||..|..  .+++|++++.    .+.+++++++++|.++
T Consensus       307 l~~~l-~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          307 LTKIQ-DETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             HHHHH-HHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHH-HhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence            66666 589999999987753  4589998862    4789999999999875

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.97  E-value=2e-30  Score=250.31  Aligned_cols=333  Identities=18%  Similarity=0.149  Sum_probs=244.4

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .++.|+ +..+ ...|++++++.+.+..  ...|.+   ..|..++++++++++++.+|++. .+++++|+++++..++.
T Consensus        67 ~~~~lg-~~~~-~~~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~  141 (474)
T 1wyu_B           67 TFYPLG-SCTM-KYNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGIL  141 (474)
T ss_dssp             SCCCBT-TTCC-CCCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHH
T ss_pred             Cccccc-cccc-cCCHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHH
Confidence            356666 3222 3456777777766332  344543   45667899999999999988764 46678999999998666


Q ss_pred             Hh----cCCCC-----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768          108 TL----CDAGD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (400)
Q Consensus       108 ~l----~~~gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG  178 (400)
                      ++    .++||     +|+++.++|+++...++..|++++.+ |.+++ +.+|+++|++.+++++  ++|++++| ||+|
T Consensus       142 ~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v-~~~~~-~~~d~~~L~~~i~~~t--~~v~~~~p-n~~G  216 (474)
T 1wyu_B          142 IIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREI-PSGPE-GEVDLEALKRELGPHV--AALMLTNP-NTLG  216 (474)
T ss_dssp             HHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEE-CBCTT-SSBCHHHHHHHCSTTE--EEEEECSS-CTTS
T ss_pred             HHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEe-cCCCC-CCcCHHHHHHhhCCCc--eEEEEECC-CCCc
Confidence            65    35787     99999999999999999999999999 88754 5789999999998665  89999998 6899


Q ss_pred             cC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC-c---ceeEEEEccCCcHHH
Q 015768          179 TY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM-G---WRVGYIAYPSEVEGF  253 (400)
Q Consensus       179 ~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g---~~~G~i~~~~~~~~~  253 (400)
                      .+ .+   +++|.++|++||+++|+|++|..+..+..  .....+.++++.|+||+++.+ |   .|+||++.+   +++
T Consensus       217 ~~~~~---l~~i~~l~~~~g~~li~Dea~~~~~~g~~--~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~---~~l  288 (474)
T 1wyu_B          217 LFERR---ILEISRLCKEAGVQLYYDGANLNAIMGWA--RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVK---AHL  288 (474)
T ss_dssp             CCCTT---HHHHHHHHHHHTCEEEEEGGGGGGTTTTC--CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEEC---GGG
T ss_pred             ccCCC---HHHHHHHHHHcCCEEEEeCchhhhhccCC--CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEc---HHH
Confidence            88 46   99999999999999999999986654321  111224678899999999755 3   589999998   555


Q ss_pred             HHHHHH-h------------------hccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768          254 ATQLLK-V------------------QDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV  313 (400)
Q Consensus       254 ~~~l~~-~------------------~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  313 (400)
                      ++.+.. .                  ....+++.+.+.+.++..++.. +.++++++.+++.++++++.+.|++++ +.+
T Consensus       289 ~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~  367 (474)
T 1wyu_B          289 APYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRV  367 (474)
T ss_dssp             GGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBC
T ss_pred             HHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cEe
Confidence            554431 0                  0112234567777777777763 346677888889999999999998873 354


Q ss_pred             cCCCCce-EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          314 KGGEGAI-YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       314 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ..+...+ .+++.++. ..+..++..+|. ++||.+ ++..|.  .++++||+++. ++++++++++++|++++++
T Consensus       368 ~~~~~~~~~~~~~~~~-~~~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~  440 (474)
T 1wyu_B          368 PYDGPSMHEFVAQPPE-GFRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK  440 (474)
T ss_dssp             SSCSSCCSCEEEBCST-TCCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred             cCCCCcceEEEEEcCC-CCCHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence            3222122 15556632 236788998887 679985 554443  36899999986 6899999999999998865

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.97  E-value=3e-30  Score=241.94  Aligned_cols=319  Identities=15%  Similarity=0.148  Sum_probs=233.5

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .++++|+.+.+.+.  + +.+++.+.+...   .|.+..+..++++.+++++    +.  +++++++|+|+|+..++.++
T Consensus         6 ~~~~~l~~~~~~~~--~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~a~~~~~~~~   73 (374)
T 3uwc_A            6 VPYSYLERQFADIE--P-YLNDLREFIKTA---DFTLGAELEKFEKRFAALH----NA--PHAIGVGTGTDALAMSFKML   73 (374)
T ss_dssp             BCSCCHHHHTSSCH--H-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHT----TC--SEEEEESCHHHHHHHHHHHT
T ss_pred             ceeeccccCCCCch--H-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHc
Confidence            45677777766653  3 888888877653   3656677788888888887    43  48899999999999999999


Q ss_pred             -cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       110 -~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                       .++||+|+++.|+|+++...++..|++++.+ +.+ +++.+|++.+++.+++++  ++|+   |+||||.+.+   +++
T Consensus        74 ~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~--~~v~---~~n~~G~~~~---~~~  143 (374)
T 3uwc_A           74 NIGAGDEVITCANTFIASVGAIVQAGATPVLV-DSE-NGYVIDPEKIEAAITDKT--KAIM---PVHYTGNIAD---MPA  143 (374)
T ss_dssp             TCCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBC-TTSSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHH
T ss_pred             CCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-ecC-CCCCcCHHHHHHhCCCCc--eEEE---EeCCcCCcCC---HHH
Confidence             8999999999999999999999999999999 887 556789999999987654  7776   8899999999   899


Q ss_pred             HHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--  263 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--  263 (400)
                      |.++|++||+++|+|++|+.+.. .+...   ....++++.|+|  |+++.+|. +|+++.++  +++.+.+......  
T Consensus       144 i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~~d~~~~s~~~~K~l~~~g~-~g~~~~~~--~~~~~~~~~~~~~~~  217 (374)
T 3uwc_A          144 LAKIAKKHNLHIVEDACQTILGRINDKFV---GSWGQFACFSLHPLKNLNVWSD-AGVIITHS--DEYAEKLRLYRNHGL  217 (374)
T ss_dssp             HHHHHHHTTCEEEEECTTCTTCEETTEET---TSSSSEEEEECSSSSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTE
T ss_pred             HHHHHHHcCCEEEEeCCCccCceeCCeec---cccccEEEEeCCCCCcCCccce-eEEEEeCC--HHHHHHHHHHHhcCc
Confidence            99999999999999999986542 22111   111357777866  99974354 88888775  6777777665421  


Q ss_pred             ----------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-CcccC-CCCceE----EEeeCC
Q 015768          264 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG-GEGAIY----LWARLP  327 (400)
Q Consensus       264 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~~~~~~----~~~~~~  327 (400)
                                .++..+.+...+....+    +.+++..++.+++.+++.+.|++++. +.+.. +.+...    +.+..+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (374)
T 3uwc_A          218 INRDVCVEYGINCRMDTIQAVIANRLM----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK  293 (374)
T ss_dssp             EETTEESSCCCBCBCCHHHHHHHHHHG----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET
T ss_pred             cccCccccccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC
Confidence                      12223434333333333    22566777888888999999998874 34332 221222    222222


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCccC-----------------------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGACG-----------------------CRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                          +..++...|. ++||.+.++....                       ..+.+|++++. ++++|++++++.|++++
T Consensus       294 ----~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l  368 (374)
T 3uwc_A          294 ----YRDQLFQYLK-DNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFY  368 (374)
T ss_dssp             ----THHHHHHHHH-HTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHH-HCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence                5678888775 7899998875110                       01689999887 89999999999999988


Q ss_pred             HH
Q 015768          384 EE  385 (400)
Q Consensus       384 ~~  385 (400)
                      ++
T Consensus       369 ~~  370 (374)
T 3uwc_A          369 LE  370 (374)
T ss_dssp             HT
T ss_pred             Hh
Confidence            75

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.97  E-value=6e-31  Score=253.78  Aligned_cols=338  Identities=11%  Similarity=-0.003  Sum_probs=232.2

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcC---CCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++.+.|+.+... +.|+.+.+++.+.+..   .....|. ...+...+.+.+.+++++.+|+++++|++|+|+|++++.+
T Consensus        66 ~~~iyld~~~~g-~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~  144 (465)
T 3e9k_A           66 ENAIYFLGNSLG-LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLL  144 (465)
T ss_dssp             CBCEECBTTTSC-CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHH
T ss_pred             CCeEEecCCccC-CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHH
Confidence            367788776544 3455565555554421   1111111 1122233444455555555588899999999999999999


Q ss_pred             HHHhcCCCCE---EEEeCCCccchhH----HHHhcCcEE----EEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCC
Q 015768          106 VLTLCDAGDS---VVMFAPYYFNSYM----SFQMTGVTH----ILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNP  173 (400)
Q Consensus       106 ~~~l~~~gd~---vlv~~p~~~~~~~----~~~~~g~~~----~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p  173 (400)
                      +.++.++|+.   |+++.|+|++...    .++..|+++    +.+.|.++ ++.+|++++++.++.+ ..+++|+++++
T Consensus       145 ~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~~~~lv~~~~~  223 (465)
T 3e9k_A          145 MLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREG-EETLRIEDILEVIEKEGDSIAVILFSGV  223 (465)
T ss_dssp             HHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTT-CSSCCHHHHHHHHHHHGGGEEEEEEESB
T ss_pred             HHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCC-CCccCHHHHHHHHHhcCCCeEEEEEeCc
Confidence            9999876654   9999999988544    566688764    23314443 4578999999999721 22599999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  253 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~  253 (400)
                      +||||.+.|   +++|.++|++||+++|+|++|+.+..   +......+.++++.|++|+++.++.++|+++.+   +++
T Consensus       224 ~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~---~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~---~~~  294 (465)
T 3e9k_A          224 HFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNV---ELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIH---EKH  294 (465)
T ss_dssp             CTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHHHTCCEEEECSSSTTCCCTTCCCEEEEC---GGG
T ss_pred             ccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCc---CCchhhcCCCEEEECcccccccCCCceEEEEEc---HHH
Confidence            999999999   88899999999999999999984322   222223456789999999993233367888887   455


Q ss_pred             HHHHHHhhc-------------------------cCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhcc
Q 015768          254 ATQLLKVQD-------------------------NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       254 ~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      .+.+.....                         ....+++.+...++..+++...++ +++.+++..++++++.+.|++
T Consensus       295 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~  374 (465)
T 3e9k_A          295 AHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKH  374 (465)
T ss_dssp             TTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHh
Confidence            443321100                         011256667777777777643332 677888888999999998887


Q ss_pred             C----------CCCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHH
Q 015768          308 L----------GEGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDD  371 (400)
Q Consensus       308 ~----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~  371 (400)
                      +          +++.+..|.    .+.++++.++.   +..++...|. ++||.+..    ..++++||++ +. ++++|
T Consensus       375 ~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---~~~~l~~~L~-~~Gi~v~~----~~~~~iRis~~~~~~t~ed  446 (465)
T 3e9k_A          375 NYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---PNKDVFQELE-KRGVVCDK----RNPNGIRVAPVPLYNSFHD  446 (465)
T ss_dssp             HCC---------CEEECSCSSGGGBCSCEEEEECC---TTCCHHHHHH-TTTEECEE----ETTTEEEEBCCTTTCCHHH
T ss_pred             hccccccccCCCCeEEeCCCCHhhcccEEEEEecC---CHHHHHHHHH-HCCEEEec----CCCCEEEEeCcccCCCHHH
Confidence            4          444565543    26677777762   4567788775 78999873    3578999998 45 89999


Q ss_pred             HHHHHHHHHHHHHHH
Q 015768          372 CKAAADRLRRGLEEL  386 (400)
Q Consensus       372 ~~~~~~~l~~~l~~~  386 (400)
                      ++++++.|++++++.
T Consensus       447 i~~~~~~l~~~l~~~  461 (465)
T 3e9k_A          447 VYKFTNLLTSILDSA  461 (465)
T ss_dssp             HHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999988754

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.97  E-value=1e-30  Score=243.55  Aligned_cols=299  Identities=15%  Similarity=0.100  Sum_probs=210.6

Q ss_pred             CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEeCCCccchhH---HHHhcCcE
Q 015768           62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMFAPYYFNSYM---SFQMTGVT  136 (400)
Q Consensus        62 ~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd--~vlv~~p~~~~~~~---~~~~~g~~  136 (400)
                      ..|++..+..++++.+++++    |.  +..++++|+++++..++.++.++||  .|+++.++|+....   .....|++
T Consensus        41 ~~y~~~~~~~~l~~~la~~~----~~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~  114 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVL----GM--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIE  114 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCE
T ss_pred             ccccCChHHHHHHHHHHHHh----CC--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcE
Confidence            45766677888888888887    54  3446668888999999999998888  67777776655443   35567899


Q ss_pred             EEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEcccccccc--cCC
Q 015768          137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM--YDG  213 (400)
Q Consensus       137 ~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~  213 (400)
                      ++.+ +.+  .+.+|++++++..  +  ++++++++|+||+ |.+++.+++++|+++|++||+++|+|++|....  ..+
T Consensus       115 ~~~v-~~~--~~~~d~~~l~~~~--~--~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~  187 (357)
T 3lws_A          115 TILV-GAA--DRLMTLDEIKALP--D--IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE  187 (357)
T ss_dssp             EEEC-SCT--TSCCCHHHHHTCC--S--CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred             EEEe-cCC--CCCcCHHHHhcCc--C--cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence            9888 643  2368999999873  2  4999999999998 999999999999999999999999999987221  111


Q ss_pred             CCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC--cCccHHHHHHHHHHhcCCcHHHHHHH
Q 015768          214 RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP--ICASIISQHLALYSLQTGPEWVTERV  291 (400)
Q Consensus       214 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~  291 (400)
                      ..........++++.|+||+++.++  .||++.+   +++++.+........  .........++..+++.   + .+..
T Consensus       188 ~~~~~~~~~~d~~~~s~sK~~~~~~--gg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~-~~~~  258 (357)
T 3lws_A          188 KTAAEIAGLFDSIYISFYKGLGGIA--GAILAGP---AAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL---R-KDRM  258 (357)
T ss_dssp             CCHHHHHTTSSEEEEESSSTTCCSS--CEEEEEC---HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH---H-TTCH
T ss_pred             CChHHHHhcCCEEEEeccccCCCCc--eEEEEcC---HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH---H-HHHH
Confidence            1111111223456889999994232  2999888   788888876543222  11223333334445542   2 2333


Q ss_pred             HHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEecc--
Q 015768          292 KDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGG--  366 (400)
Q Consensus       292 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~--  366 (400)
                      +++.++++++.+.|++++++.+ ..+..++++|++++... .+.+++...| .++||.+.||..+.. ..++|++++.  
T Consensus       259 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~g~~~~~~~~~~r~~i~~~~  337 (357)
T 3lws_A          259 GQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQ-EETGLGFVGYLVDKDGYCSTEISVGDAY  337 (357)
T ss_dssp             HHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHH-HHHCEESCSCCEECSSEEEEEEEBCTTG
T ss_pred             HHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHH-HhcCeEEecccccCCCceEEEEEecchh
Confidence            4467778889999999876666 34556889999987531 1245666666 589999999976652 2389999873  


Q ss_pred             --CCHHHHHHHHHHHHHHH
Q 015768          367 --LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       367 --~~~~~~~~~~~~l~~~l  383 (400)
                        .+.+++++++++|.+++
T Consensus       338 ~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          338 GELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             GGSCHHHHHHHHHHHHHHC
T ss_pred             hhcCHHHHHHHHHHHHHhc
Confidence              47899999999998875

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.97  E-value=3.8e-31  Score=253.71  Aligned_cols=337  Identities=14%  Similarity=0.099  Sum_probs=232.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHH-H-HHHH---hhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCC
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAM-E-KVKE---LVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAG   97 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~-~-a~~~---~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g   97 (400)
                      .+|+.++||+.+.  ++++ .+|+++ + ++.+   .+.+..  .|+ .....+...++++.+.+.++ ..+++|++++|
T Consensus        51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~--~~~-~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~  127 (449)
T 2cjg_A           51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNK--PSN-SDVYSVAMARFVETFARVLGDPALPHLFFVEG  127 (449)
T ss_dssp             TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCC--CCT-TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESS
T ss_pred             CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcC--CCC-cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCc
Confidence            3467789987765  4454 489999 8 9988   766532  232 12233455666666666655 56789999999


Q ss_pred             hHHHHHHHHHHhc---C----------C-CCEEEEeCCCccchhHHH-H--------hcCc-----EEEEeccCCCCCC-
Q 015768           98 ANQAFVNIVLTLC---D----------A-GDSVVMFAPYYFNSYMSF-Q--------MTGV-----THILVGPCSSKTL-  148 (400)
Q Consensus        98 ~t~a~~~~~~~l~---~----------~-gd~vlv~~p~~~~~~~~~-~--------~~g~-----~~~~~~~~~~~~~-  148 (400)
                      +++|++.++..+.   +          + ||+|++.+|+|++..... .        ..++     .++.+ |.++.+. 
T Consensus       128 gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~  206 (449)
T 2cjg_A          128 GALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDA-PYMRPGLD  206 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECC-CCCCTTCC
T ss_pred             hHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEE-cCCCchhh
Confidence            9999999998653   2          2 899999999998865422 1        1222     45555 5543111 


Q ss_pred             --------CCCHHHHHHhhcc-CCCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc
Q 015768          149 --------HPDADWLEKTLET-KPTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC  218 (400)
Q Consensus       149 --------~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~  218 (400)
                              ..+++.|++.++. ...+++|+++..+||+| .+++.+++++|.++|++||+++|+||+|.++...+.....
T Consensus       207 ~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~  286 (449)
T 2cjg_A          207 EPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAY  286 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTH
T ss_pred             ccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceee
Confidence                    1355668888862 12246666555578999 5899999999999999999999999999977655432111


Q ss_pred             c--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH-----HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHH
Q 015768          219 V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-----LKVQDNIPICASIISQHLALYSLQTGPEWVTERV  291 (400)
Q Consensus       219 ~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  291 (400)
                      .  ....++  .++||++     |+||++.+   +++++.+     .......+++.+++.+.++.++|+...+  +++.
T Consensus       287 ~~~~~~~di--~t~sK~l-----~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~  354 (449)
T 2cjg_A          287 QQLDVAPDI--VAFGKKT-----QVCGVMAG---RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA--EGLF  354 (449)
T ss_dssp             HHHTCCCSE--EEECGGG-----SSEEEEEC---GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH--HTHH
T ss_pred             cccCCCceE--EEecCcc-----cEEEEEEC---HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh--ccHH
Confidence            1  112223  3788987     68999988   5666542     2223345778899999999988874222  3456


Q ss_pred             HHHHHHHHHHHHHhccC----CC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768          292 KDLVRNREIIREALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  366 (400)
Q Consensus       292 ~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~  366 (400)
                      ++++++++++++.|+++    +. +....+. +.++++.++... +..++..+|+ ++||.+.++.    ++++|++++.
T Consensus       355 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~~~~~l~-~~Gv~v~~~g----~~~iRi~~~~  427 (449)
T 2cjg_A          355 ERAVQHGKYLRARLDELAADFPAVVLDPRGR-GLMCAFSLPTTA-DRDELIRQLW-QRAVIVLPAG----ADTVRFRPPL  427 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSTTTSEEEEEE-TTEEEEECSSHH-HHHHHHHHHH-HTTEECEEET----TTEEEECCCT
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEeec-cEEEEEEECChH-HHHHHHHHHH-HCCeEEecCC----CCEEEEECCC
Confidence            67777888888888753    43 3344455 666677886421 3567888887 7899999863    6899998776


Q ss_pred             -CCHHHHHHHHHHHHHHHHHH
Q 015768          367 -LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       367 -~~~~~~~~~~~~l~~~l~~~  386 (400)
                       .+++++++++++|+++++++
T Consensus       428 ~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          428 TVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHh
Confidence             79999999999999998764

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.97  E-value=1.8e-29  Score=238.00  Aligned_cols=321  Identities=18%  Similarity=0.146  Sum_probs=230.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      ++++++..+.+.+  ++++++++.+.+..+   .|. +..+..++++.+++++    +.  +++++++|+|+|+..++.+
T Consensus        22 ~~~~~l~~~~p~~--~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~----~~--~~~i~~~~gt~al~~~l~~   90 (391)
T 3dr4_A           22 SDLPRISVAAPRL--DGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYC----GV--KHAIACNNGTTALHLALVA   90 (391)
T ss_dssp             ------CCCCCCC--CSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHH
T ss_pred             CCCceeccCCCCC--CHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHH
Confidence            4677888887765  478888888887653   344 5667788999999988    43  3889999999999999999


Q ss_pred             h-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          109 L-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       109 l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      + .++||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++  ++|+   ++||||.+.+   ++
T Consensus        91 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~--~~v~---~~n~tG~~~~---~~  161 (391)
T 3dr4_A           91 MGIGPGDEVIVPSLTYIASANSVTYCGATPVLV-DNDPRTFNLDAAKLEALITPRT--KAIM---PVHLYGQICD---MD  161 (391)
T ss_dssp             HTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGSGGGCCTTE--EEEC---CBCGGGCCCC---HH
T ss_pred             cCCCCcCEEEECCCchHHHHHHHHHCCCEEEEE-ecCccccCcCHHHHHHhcCCCc--eEEE---EECCCCChhh---HH
Confidence            9 8999999999999999999999999999999 8887777889999999987654  7776   5789999999   88


Q ss_pred             HHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  264 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~  264 (400)
                      +|.++|+++|+++|+|++|+.+.. .+... ....+  +.+.|||  |+++  |.+.|+++.++  +++.+++.......
T Consensus       162 ~i~~l~~~~~~~li~D~a~~~g~~~~~~~~-~~~~d--i~~~S~s~~K~l~--~g~gg~~~~~~--~~~~~~~~~~~~~g  234 (391)
T 3dr4_A          162 PILEVARRHNLLVIEDAAEAVGATYRGKKS-GSLGD--CATFSFFGNAIIT--TGEGGMITTND--DDLAAKMRLLRGQG  234 (391)
T ss_dssp             HHHHHHHHTTCEEEEECTTCTTCEETTEET-TSSSS--EEEEECBTTSSSC--CBSCEEEEESC--HHHHHHHHHHHBTT
T ss_pred             HHHHHHHHcCCEEEEECcccccceECCeee-cccCC--EEEEECCCCCcCC--cCCeEEEEECC--HHHHHHHHHHHhcC
Confidence            899999999999999999985432 22111 11123  5566655  8875  45689988775  66777776554221


Q ss_pred             --------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-------CCceEEE
Q 015768          265 --------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-------EGAIYLW  323 (400)
Q Consensus       265 --------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-------~~~~~~~  323 (400)
                                    .+..+.+...+....+    +.+++..++.+++++++.+.|+++ ++.+..+       .....++
T Consensus       235 ~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~  309 (391)
T 3dr4_A          235 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQL----ERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYT  309 (391)
T ss_dssp             CCTTSTTCCSSCCCBCBCCHHHHHHHHHHH----HTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEE
T ss_pred             CCCCCcccccccccccCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEE
Confidence                          1233433333333233    235667777888889999999888 3344333       1123345


Q ss_pred             eeCCCC-CCCHHHHHHHHHHhcCeEEeCCCcc---C-----------------CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          324 ARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC---G-----------------CRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       324 ~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~---~-----------------~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      +.++.. ..+.+++...|. ++||.+.++...   .                 ....+|++++. +|++|++.+++.|++
T Consensus       310 i~~~~~~~~~~~~l~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~  388 (391)
T 3dr4_A          310 VRLGEGLSTTRDQVIKDLD-ALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQ  388 (391)
T ss_dssp             EEECSSCSSCHHHHHHHHH-HTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred             EEECCccchhHHHHHHHHH-HCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence            666541 236788888875 789999987521   0                 13579999887 899999999999887


Q ss_pred             HH
Q 015768          382 GL  383 (400)
Q Consensus       382 ~l  383 (400)
                      ++
T Consensus       389 ~l  390 (391)
T 3dr4_A          389 VL  390 (391)
T ss_dssp             TC
T ss_pred             Hh
Confidence            54

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.97  E-value=1.4e-30  Score=250.29  Aligned_cols=331  Identities=13%  Similarity=0.101  Sum_probs=223.9

Q ss_pred             cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +++.++||+.+.  ++++ .+|++++++.+.+.+..  .|+   +..++++++++++.+.++ .++++++++|+++|+..
T Consensus        55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~  128 (453)
T 2cy8_A           55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLL  128 (453)
T ss_dssp             TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHH
T ss_pred             CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHH
Confidence            457789998886  3343 68999999999987642  232   356889999999988876 67899999999999999


Q ss_pred             HHHH---hcCCCCEEEEeCCCccchhHHHHh-----------cCcE------EEEeccCCCCCCCCCHHHHHHhhccC-C
Q 015768          105 IVLT---LCDAGDSVVMFAPYYFNSYMSFQM-----------TGVT------HILVGPCSSKTLHPDADWLEKTLETK-P  163 (400)
Q Consensus       105 ~~~~---l~~~gd~vlv~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~e~l~~~l~~~-~  163 (400)
                      ++++   +.++ +.|++.+|+|+++......           .|+.      +..+ |.      .|++.+++.++.. .
T Consensus       129 al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~  200 (453)
T 2cy8_A          129 ALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI-RP------DDIEGMREVFANHGS  200 (453)
T ss_dssp             HHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEE-CT------TCHHHHHHHHHHHGG
T ss_pred             HHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec-CC------CCHHHHHHHHHhcCC
Confidence            9998   5554 6888899999876543321           1321      2333 22      2889999988731 1


Q ss_pred             CCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcce
Q 015768          164 TPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~  240 (400)
                      .+++|+++..+|++|.+ .+.+++++|.++|++||+++|+||+|+++ ..+.....  .....+  +.|+||+++ +|+|
T Consensus       201 ~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d--i~s~sK~l~-~G~~  276 (453)
T 2cy8_A          201 DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPD--LTCLAKASA-GGLP  276 (453)
T ss_dssp             GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCS--EEEEEGGGG-TTSS
T ss_pred             CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCc--EEEEChhhh-CCcc
Confidence            23666555445779975 57999999999999999999999999977 43322111  111122  348899998 6899


Q ss_pred             eEEEEccCCcHHHHHHHHH-----hhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccC----CC
Q 015768          241 VGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL----GE  310 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~----~~  310 (400)
                      +||++++   +++++.+..     .....+++.+++++.++.++|+. .   .++..++++++++++++.|+++    +.
T Consensus       277 ~G~v~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~  350 (453)
T 2cy8_A          277 GGILGGR---EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL---EDDVCAKINDLGQFAREAMNHLFARKGL  350 (453)
T ss_dssp             CEEEEEC---HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEech---HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            9999998   677776644     11234677889999888888864 2   1345566677777777777653    44


Q ss_pred             CcccCCCCceEEEeeCCC-----C-------------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHH
Q 015768          311 GAVKGGEGAIYLWARLPE-----K-------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC  372 (400)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~  372 (400)
                      .....+. +.++|+.++.     .             ..+..++..+|+ ++||.+.|+      +.+|+++. .+++++
T Consensus       351 ~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~l~~~-~t~~~i  421 (453)
T 2cy8_A          351 NWLAYGR-FSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVFLSAQ-HEREHV  421 (453)
T ss_dssp             CEEEECC-TTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEECCTT-CCHHHH
T ss_pred             cEEEEEe-eeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEEeecc-CCHHHH
Confidence            3334444 6788888864     1             011456887776 689999653      23677654 699999


Q ss_pred             HHHHHHHHHHHHHHhccCc
Q 015768          373 KAAADRLRRGLEELVKDGM  391 (400)
Q Consensus       373 ~~~~~~l~~~l~~~~~~~~  391 (400)
                      ++++++|+++++++.+.+.
T Consensus       422 ~~~l~~l~~~l~~~~~~~~  440 (453)
T 2cy8_A          422 EHLVTTFDRVLDRLADENL  440 (453)
T ss_dssp             HHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHhCCC
Confidence            9999999999998876544

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.97  E-value=3.4e-29  Score=235.80  Aligned_cols=284  Identities=18%  Similarity=0.112  Sum_probs=212.8

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCC
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~  147 (400)
                      ...+.+++.+++..|.  +++++++|+++|++.++.++.++||+|+++.|+|+++...+    +..|++++.+ +.+   
T Consensus        66 ~~~~~l~~~la~~~g~--~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~---  139 (392)
T 3qhx_A           66 PTRTALEAALAAVEDA--AFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV-ALA---  139 (392)
T ss_dssp             HHHHHHHHHHHHHTTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE-CTT---
T ss_pred             hHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe-CCC---
Confidence            3344555555555564  47899999999999999999999999999999999887766    6679999988 654   


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                         |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|++||+++|+|++|+.+....    ....+.++++
T Consensus       140 ---d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~----~~~~~~di~~  207 (392)
T 3qhx_A          140 ---DLDAVRAAIRPTT--RLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ----PLSLGADVVL  207 (392)
T ss_dssp             ---CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GGGGTCSEEE
T ss_pred             ---CHHHHHHhhCCCC--eEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC----hHHhCCcEEE
Confidence               7899999998765  99999999999999999   9999999999999999999998543221    1233567999


Q ss_pred             eccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768          228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      .|+||.+|.+| +++||++.++  +++.+.+.......+.+.++...+++...++.    +..+.+++.++++.+.+.|+
T Consensus       208 ~S~sK~lg~~g~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~l~~~L~  281 (392)
T 3qhx_A          208 HSTTKYIGGHSDVVGGALVTND--EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT----LVLRMQRHSENAAAVAEFLA  281 (392)
T ss_dssp             EETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHH
T ss_pred             EcCccccCCCCCceEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHHh
Confidence            99999998666 7899999885  67888887776656777888888888877765    45566777888888888888


Q ss_pred             cCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------------
Q 015768          307 PLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------------  355 (400)
Q Consensus       307 ~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------------  355 (400)
                      +++.+. +..|                ..+.++++.++......+.+...+ +..++.+..|..+.              
T Consensus       282 ~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~  360 (392)
T 3qhx_A          282 EHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKT-NIFILAESLGSVESLIEHPSAMTHASTA  360 (392)
T ss_dssp             TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHC-SSSEECSCCCCSSCEEECGGGTSCGGGB
T ss_pred             cCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhC-CCceECCCCCCCCceeeCcccccccccC
Confidence            776532 2111                125577888875222344555544 35677777776532              


Q ss_pred             ------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          356 ------CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       356 ------~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                            .++.+|||++.   ++.++.++.|.+++
T Consensus       361 ~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al  391 (392)
T 3qhx_A          361 GSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL  391 (392)
T ss_dssp             TTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred             HHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence                  25679999997   44555666666654

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.97  E-value=2.4e-30  Score=247.47  Aligned_cols=333  Identities=16%  Similarity=0.123  Sum_probs=230.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+.....|     ..+.++++++++.+.++ ..+++++++|+++|+.
T Consensus        53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~  126 (434)
T 2epj_A           53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA-----PGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATM  126 (434)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHH
T ss_pred             CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence            3567899998886  3444 689999999999877422222     34455666676666664 4789999999999999


Q ss_pred             HHHHH---hcCCCCEEEEeCCCccchhHHHH--------------hcCc------EEEEeccCCCCCCCCCHHHHHHhhc
Q 015768          104 NIVLT---LCDAGDSVVMFAPYYFNSYMSFQ--------------MTGV------THILVGPCSSKTLHPDADWLEKTLE  160 (400)
Q Consensus       104 ~~~~~---l~~~gd~vlv~~p~~~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~~~e~l~~~l~  160 (400)
                      .++++   +. +++.|++.+|+|++......              ..|+      .++.+ |.      .|++.+++.++
T Consensus       127 ~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~  198 (434)
T 2epj_A          127 TAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVT-PY------NDVEALERVFA  198 (434)
T ss_dssp             HHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEE-ET------TCHHHHHHHHH
T ss_pred             HHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEec-CC------CCHHHHHHHHH
Confidence            99987   44 45788888999988554221              1132      23444 32      27899999887


Q ss_pred             cC-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          161 TK-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       161 ~~-~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      .. ..+++|+++..++++|.+. +.+++++|.++|++||+++|+||+|+++.. +........+....+.|+||.+| +|
T Consensus       199 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~-g~~~~~~~~~~~~di~s~sK~l~-~G  276 (434)
T 2epj_A          199 EYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL-GLEGAQGYFNIEGDIIVLGKIIG-GG  276 (434)
T ss_dssp             HHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS-STTHHHHHHTCCCSEEEEEGGGG-TT
T ss_pred             hCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC-CcchhhHHhCCCCCeeeecchhc-CC
Confidence            31 1236665555567899865 799999999999999999999999997632 32111100011111348899998 58


Q ss_pred             ceeEEEEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEG  311 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~  311 (400)
                      +|+||++++   +++++.+...   ....+++.+++.+.++.++|+...+  ++..++++++++++++.|+++    +..
T Consensus       277 ~~~G~v~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~  351 (434)
T 2epj_A          277 FPVGAVAGS---REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE--EPVYSVSREAAKALEEAASEVLDRTGLP  351 (434)
T ss_dssp             SSCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             cceeeeeec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence            999999998   7777766542   1234677889999888888874211  345666777777777777664    442


Q ss_pred             cccCCCCceEEEeeCCCCC------------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      ....+. +.++|+.++...            .+..++..+|+ ++||.+.++.    ...+|+++. .+++++++++++|
T Consensus       352 ~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l  424 (434)
T 2epj_A          352 YTINRV-ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSN----LEAVFTGLP-HQGEALEIAVEGL  424 (434)
T ss_dssp             EEEEEE-TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CSHHHHHHHHHHH
T ss_pred             EEEEEe-eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccC----CCcEEEecc-CCHHHHHHHHHHH
Confidence            223343 678888876410            12456777776 7899999875    235677655 5999999999999


Q ss_pred             HHHHHHHh
Q 015768          380 RRGLEELV  387 (400)
Q Consensus       380 ~~~l~~~~  387 (400)
                      +++++++.
T Consensus       425 ~~~l~~~~  432 (434)
T 2epj_A          425 RSSLKTVL  432 (434)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998763

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.97  E-value=4.3e-29  Score=233.69  Aligned_cols=326  Identities=14%  Similarity=0.144  Sum_probs=233.7

Q ss_pred             CCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH-HHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCC
Q 015768           36 AQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL-VKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAG  113 (400)
Q Consensus        36 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~-a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~g  113 (400)
                      ..+.+++++++++++++.+.+.++....|  .....++++++ ++++    | ..+++++++|+|+|+..++.++ .+||
T Consensus         6 ~~~~p~~~~~~~i~~a~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~----g-~~~~~v~~~sgt~al~~al~~l~~~~G   78 (377)
T 3ju7_A            6 PFLRASTVPVIEYLDELKEIDASHIYTNY--GPINQRFEQTIMSGFF----Q-NRGAVTTVANATLGLMAAIQLKKRKKG   78 (377)
T ss_dssp             CSCCCCCCCGGGGHHHHHHHHHHTCCSSS--CHHHHHHHHHHHHHTS----T-TCSEEEEESCHHHHHHHHHHHHSCTTC
T ss_pred             eccCCCCCCcHHHHHHHHHHHHcCCcccC--CHHHHHHHHHHHHHHh----C-CCCeEEEeCCHHHHHHHHHHHcCCCCc
Confidence            34568888899999999999886542223  33467778887 7776    5 2577899999999999999998 8999


Q ss_pred             CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       114 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      |+|+++.|+|.++...++..|++++++ +.+++++.+|++++++.+ +++..+++|+   |+||+|...+   +++|.++
T Consensus        79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~l  151 (377)
T 3ju7_A           79 KYALMPSFTFPATPLAAIWCGLEPYFI-DISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEEL  151 (377)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHH
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHH
Confidence            999999999999999999999999999 888777889999999988 5551137776   6789999999   8888999


Q ss_pred             HHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--------
Q 015768          193 CKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------  263 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--------  263 (400)
                      |+ ||+++|+|++|+.+........ ....+..++..+.+|.++ +| +.|+++.++  +++.++++..+..        
T Consensus       152 a~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~-~g-~gG~~~~~~--~~l~~~~~~~~~~g~~~~~~~  226 (377)
T 3ju7_A          152 EK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFG-IG-EGGLIYSKN--EEDIQRIKRMGNFGFDTNREC  226 (377)
T ss_dssp             HH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSC-CB-SCEEEEESC--HHHHHHHHHHTBTTBCTTSCB
T ss_pred             Hh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCC-CC-CcEEEEECC--HHHHHHHHHHHhcCCCCCCce
Confidence            99 9999999999985543111111 111233444444579997 34 678888776  7888888776542        


Q ss_pred             ----CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC--cccCCC--C--ceEEEeeCCCCCCCH
Q 015768          264 ----IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG--AVKGGE--G--AIYLWARLPEKHLDD  333 (400)
Q Consensus       264 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~--~--~~~~~~~~~~~~~~~  333 (400)
                          ..+.++.+....+...++.    ++.+.++.+++++++.+.|++++.+  .+....  .  ..++.+.++.. .+.
T Consensus       227 ~~~g~~~~~~~~~aa~~~~~l~~----l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  301 (377)
T 3ju7_A          227 TMMGFNCKMSEYAAAIGIATMKK----WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEE-VRN  301 (377)
T ss_dssp             CSSCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTT-SCH
T ss_pred             eeccccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCCh-hhH
Confidence                2344566666655556643    5677777888888888888887642  121111  1  12344566542 247


Q ss_pred             HHHHHHHHHhcCeEEeCCC--ccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGG--ACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~--~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++...|. ++||.+..+.  .++.                   .+.+|+.++. ++++|++..++.|++++.+.
T Consensus       302 ~~l~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~  375 (377)
T 3ju7_A          302 KQVIEDLK-KQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA  375 (377)
T ss_dssp             HHHHHHHH-TTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred             HHHHHHHH-HCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence            78888775 8899998765  2210                   2479999887 89999999999998887653

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.97  E-value=7.8e-29  Score=234.14  Aligned_cols=281  Identities=17%  Similarity=0.172  Sum_probs=202.1

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCC
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~  147 (400)
                      ...+++++.+++.+|.+  +.++++++++|+..++.++.++||+|+++.|+|+++...+    +..|++++.+ +.+   
T Consensus        65 ~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~---  138 (398)
T 1gc0_A           65 PTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV-DMA---  138 (398)
T ss_dssp             HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE-CTT---
T ss_pred             hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CCC---
Confidence            34444445555445654  5666777789999999999999999999999999988776    6678998888 643   


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                         |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|++||+++|+|++|..+.....    ...+.++++
T Consensus       139 ---d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~----~~~~~d~~~  206 (398)
T 1gc0_A          139 ---DLQALEAAMTPAT--RVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQRP----LELGADLVV  206 (398)
T ss_dssp             ---CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCCG----GGGTCSEEE
T ss_pred             ---CHHHHHHhcCCCC--eEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCCc----hhhCceEEE
Confidence               7899999998654  99999999999999999   99999999999999999999997765321    123567999


Q ss_pred             eccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       228 ~s~sK~~g~~g~~~-G~i~~~~~~~~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      .|+||++|.+|.|+ ||++.+   ++.++ .+...... .+.+.+++.++++...++.    +..+.++..++.+.+.+.
T Consensus       207 ~S~sK~~~~~~~~~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~  279 (398)
T 1gc0_A          207 HSATKYLSGHGDITAGIVVGS---QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT----LNLRMDRHCANAQVLAEF  279 (398)
T ss_dssp             EETTTTTTCSSSCCCEEEEEC---HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHH
T ss_pred             ECCccccCCCCCCeEEEEEEC---hHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHHHH
Confidence            99999998888887 999988   55544 55554444 4566788888887777764    455666777777778777


Q ss_pred             hccCCCC--------------cccCC---CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC---CCc------c----
Q 015768          305 LSPLGEG--------------AVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GGA------C----  354 (400)
Q Consensus       305 L~~~~~~--------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~---g~~------~----  354 (400)
                      |++++.+              .+..+   ..+.++.+.++.    ..+....++++.++.+..   |+.      +    
T Consensus       280 L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~  355 (398)
T 1gc0_A          280 LARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG----GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMT  355 (398)
T ss_dssp             HHTCTTEEEEEEC----------------CCTTEEEEEETT----HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTT
T ss_pred             HhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC----CHHHHHHHHHhCCCceeccCCCCcceeeecccccc
Confidence            7765431              11111   125566667753    223344455678888765   422      1    


Q ss_pred             ------------C-CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          355 ------------G-CRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       355 ------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                                  + .++.+|||++. .++++++.+.+.|++
T Consensus       356 ~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~  396 (398)
T 1gc0_A          356 HSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA  396 (398)
T ss_dssp             TSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence                        1 14799999998 556666666655554

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.97  E-value=4.9e-29  Score=236.93  Aligned_cols=285  Identities=19%  Similarity=0.177  Sum_probs=205.7

Q ss_pred             HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCC
Q 015768           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTL  148 (400)
Q Consensus        73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~  148 (400)
                      ..+++++.+++.+|.+  +.++++++++|++.++.++.++||+|+++.++|+++...    ++..|++++.+ +.+    
T Consensus       115 ~~~~l~~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~----  187 (445)
T 1qgn_A          115 TTVVLEEKISALEGAE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVI-DPA----  187 (445)
T ss_dssp             HHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CSS----
T ss_pred             HHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CCC----
Confidence            3344444444444654  445555556999999999999999999999999887764    45679999988 653    


Q ss_pred             CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF  228 (400)
Q Consensus       149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~  228 (400)
                        |++.+++.+++++ +++|++++|+||+|.+.|   +++|.++|++||+++|+|++|..+....    ....+.++++.
T Consensus       188 --d~~~l~~ai~~~t-v~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~----~~~~g~Div~~  257 (445)
T 1qgn_A          188 --DVGALELALNQKK-VNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQK----ALALGADLVLH  257 (445)
T ss_dssp             --CHHHHHHHHHHSC-EEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----TTTTTCSEEEE
T ss_pred             --CHHHHHHHhccCC-CCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----ccccCCEEEEE
Confidence              7899999998653 589999999999999999   8899999999999999999998553321    22345679999


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                      |+||.+|..| .++||++.+   +++++++...........+++..+.+...++.    +..+.+++.++++++.+.|++
T Consensus       258 S~sK~~gg~gd~~~G~l~~~---~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~~L~~  330 (445)
T 1qgn_A          258 SATKFLGGHNDVLAGCISGP---LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEILEA  330 (445)
T ss_dssp             CTTTTTTCSSSCCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcccccccccceEEEEEEC---HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhc
Confidence            9999997444 469999998   78888776655433444566665655566654    456667777888889999988


Q ss_pred             CCCC-cccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---------------
Q 015768          308 LGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------------  355 (400)
Q Consensus       308 ~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------------  355 (400)
                      ++.+ .+..|                ..+.++++.++....+...+...+ +..++.+..|..|.               
T Consensus       331 ~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l-~~~~i~~s~G~~~sl~~~p~~~~h~~~~~  409 (445)
T 1qgn_A          331 HPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQ  409 (445)
T ss_dssp             CTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCSSSCEEECHHHHHSTTSCH
T ss_pred             CCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhC-CCceEeccCCCCceeeecccccccccCCH
Confidence            7654 33322                135677788864211133444433 23477777776542               


Q ss_pred             --------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          356 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                              .++.+|||++.   ||++++++.|+++++.
T Consensus       410 ~~~~~~g~~~~~iRlSvG~---Edid~li~~L~~al~~  444 (445)
T 1qgn_A          410 SDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS  444 (445)
T ss_dssp             HHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                    14789999995   6788999999998864

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.97  E-value=3.3e-29  Score=239.14  Aligned_cols=339  Identities=13%  Similarity=0.060  Sum_probs=217.5

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  +.++ .+|++++++.+.+.+.....| +    .+...++++.+.+.++ .++++++++|+++|++
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~----~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~  123 (429)
T 4e77_A           50 VDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGA-P----TEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATM  123 (429)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-C----CHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCC-C----CHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHH
Confidence            4578899999886  3454 689999999999887432223 2    2455666677766665 5789999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCcEE--EEeccCCCCCC------------CCCHHHHHHhhccCCCCe
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVTH--ILVGPCSSKTL------------HPDADWLEKTLETKPTPK  166 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~~~--~~~~~~~~~~~------------~~~~e~l~~~l~~~~~~~  166 (400)
                      .+++...  .+++.|++..++|++...... ..+...  ... |.. .+.            ..|++++++.++......
T Consensus       124 ~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  201 (429)
T 4e77_A          124 SAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQ-PNS-PGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV  201 (429)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCC-------------------CCC-TTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred             HHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCC-CCc-CCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence            9998654  356899999999988765221 111110  001 110 000            117899999987422124


Q ss_pred             EEEEeCCCCC-CccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768          167 LVSVVNPGNP-SGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI  244 (400)
Q Consensus       167 ~v~l~~p~np-tG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i  244 (400)
                      ++++++|+|+ +|.+ .+.+++++|.++|++||+++|+||+|.++ ..+........+....+.|+||.+| +|+|+||+
T Consensus       202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~-~G~~~G~~  279 (429)
T 4e77_A          202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIG-GGMPVGAF  279 (429)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGG-TTSCCEEE
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeeccccc-CCCCeEEE
Confidence            4445556544 4544 45677999999999999999999999977 4332221111111112348899998 79999999


Q ss_pred             EccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          245 AYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       245 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      +.+   +++++.+...   ....+++.+++.+.++.++|+..  ++..++..+.....++.|.+.+..++......+ .+
T Consensus       280 ~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g  355 (429)
T 4e77_A          280 GGR---REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNH-VG  355 (429)
T ss_dssp             EEC---HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE-ET
T ss_pred             EEC---HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEE-ee
Confidence            998   7887776542   23456788999999998888731  223333333333334444444444454333333 37


Q ss_pred             eEEEeeCCCCC-------------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKH-------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       320 ~~~~~~~~~~~-------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      .++++.++...             ....+++..|+ ++||.+.++.    ...+|+++. .+++++++++++|++++++
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l~~~l~~  428 (429)
T 4e77_A          356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSA----FEAGFMSLA-HSNEDIQKTVNAARRCFAK  428 (429)
T ss_dssp             TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecC----CCCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence            78888886531             01267777776 7899999864    345676655 5999999999999998864

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.97  E-value=3.3e-28  Score=228.99  Aligned_cols=285  Identities=22%  Similarity=0.197  Sum_probs=208.0

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~  143 (400)
                      .+..++++.+++++    +.+ +.+++ +++++|+..++.++.++||+|+++.|+|++....+    +..|++++.+ +.
T Consensus        52 ~~~~~l~~~la~~~----~~~-~~i~~-~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~  124 (386)
T 1cs1_A           52 PTRDVVQRALAELE----GGA-GAVLT-NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-DQ  124 (386)
T ss_dssp             HHHHHHHHHHHHHH----TCS-EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEE-CT
T ss_pred             ccHHHHHHHHHHHh----CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEe-CC
Confidence            44567777777776    544 55555 45599999999999999999999999998866543    6678898888 65


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                      +      |++.+++.+++++  ++|++++|+||||.+++   +++|.++|++||+++|+|++|..+.... +   ...+.
T Consensus       125 ~------d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-~---~~~~~  189 (386)
T 1cs1_A          125 G------DEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN-P---LALGA  189 (386)
T ss_dssp             T------CHHHHHHHHHTCC--SEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-G---GGGTC
T ss_pred             C------CHHHHHHhhccCC--cEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-c---cccCc
Confidence            3      7899999998655  99999999999999999   8999999999999999999999776532 1   13457


Q ss_pred             EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++++.|+||+++.+|.++ ||++.++  +++++.+.......+.+.+++.+.++...++.    +....+...++.+.+.
T Consensus       190 di~~~s~sK~~~~~~~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~  263 (386)
T 1cs1_A          190 DLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAIV  263 (386)
T ss_dssp             SEEEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred             eEEEEcCcccccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH----HHHHHHHHHHHHHHHH
Confidence            799999999998788886 9999884  47888887666544556777777776666653    4556666777788888


Q ss_pred             HHhccCCCCccc-C----------------CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768          303 EALSPLGEGAVK-G----------------GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----------  354 (400)
Q Consensus       303 ~~L~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----------  354 (400)
                      +.|++++.+... .                ...+.++.+.++.   ..+.+...+ +++||.+.+....           
T Consensus       264 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l-~~~gi~~~~~~~g~~~sl~~~~~~  339 (386)
T 1cs1_A          264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRRFL-GGLSLFTLAESLGGVESLISHAAT  339 (386)
T ss_dssp             HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHHHHHHH-HTCSSSEEBSCCCSSSCEEEEGGG
T ss_pred             HHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC---CHHHHHHHH-HhCCcceEcccCCCcceeeecccc
Confidence            888776432110 0                1125556566653   245566555 5899998742110           


Q ss_pred             --------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          355 --------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       355 --------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                                    + .++++||+++.   ++.++.+++|.++++++.
T Consensus       340 ~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~~~  384 (386)
T 1cs1_A          340 MTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAAN  384 (386)
T ss_dssp             TTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHT
T ss_pred             cccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHHhh
Confidence                          1 25799999997   445566667777776654

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.97  E-value=7.3e-29  Score=237.51  Aligned_cols=363  Identities=15%  Similarity=0.111  Sum_probs=240.0

Q ss_pred             HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHh
Q 015768           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQ   83 (400)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~   83 (400)
                      ++...+...+..+.+..+.+.+.+.|-.+.+.  +++.|++++.+.+.+....+|+      .......+++...+++++
T Consensus        34 ~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~  111 (490)
T 2a7v_A           34 SLSDSDPEMWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE  111 (490)
T ss_dssp             CHHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHcCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence            34455566677777777666778888876555  5899999999988654322332      222345677777788888


Q ss_pred             hcCCCCCc---EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH--------HHHhcCc--EEEEeccCCCCCCCC
Q 015768           84 ENKLYKSS---VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--------SFQMTGV--THILVGPCSSKTLHP  150 (400)
Q Consensus        84 ~~~~~~~~---i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~  150 (400)
                      .+|.+.+.   .++++++|+|+..++.++++|||+|++..+.|.++..        .+...|.  .++.+ +++++++.+
T Consensus       112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~-~vd~~~~~i  190 (490)
T 2a7v_A          112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI  190 (490)
T ss_dssp             HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------C-CBCTTTCSB
T ss_pred             HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEec-ccccccCCc
Confidence            88987653   3556688999999999999999999999999866431        2234454  34455 556555689


Q ss_pred             CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-ccCCCCccccCCCcEEEEec
Q 015768          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF-MYDGRKHCCVEGDHVVNLFS  229 (400)
Q Consensus       151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~-~~~~~~~~~~~~~~~i~~~s  229 (400)
                      |++++++.+.... +|+|+++.++||  ...+   +++|.++|++||+++++|++|... ...+...... ...+++++|
T Consensus       191 D~d~le~~l~~~~-~klIi~~~s~~~--~~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~-~~aDiv~~S  263 (490)
T 2a7v_A          191 DYNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-KHADIVTTT  263 (490)
T ss_dssp             CHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG-GTCSEEEEE
T ss_pred             CHHHHHHHHhhcC-CcEEEEcCCCCC--Cccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCC-CCCCEEEEC
Confidence            9999999987422 488888877876  4667   899999999999999999998633 2333222222 245689999


Q ss_pred             cccccCCCcceeEEEEccCCcH------------HHHHHHHHhhccCC-cCccHHHHHHHHHHhcCC-cHHHHHHHHHHH
Q 015768          230 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLV  295 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~~------------~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~  295 (400)
                      +||+++  |.+.|++++++...            ++.++++....... .+++.....++..++... .+.++++.+++.
T Consensus       264 ~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~  341 (490)
T 2a7v_A          264 THKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL  341 (490)
T ss_dssp             SSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            999984  56779999885310            35566665543322 234444455545455432 234578888999


Q ss_pred             HHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc---
Q 015768          296 RNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG---  366 (400)
Q Consensus       296 ~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~---  366 (400)
                      ++++++++.|++.+. .+. ++...+++|+.+.....+..++...| ++.||.+..+..++     .+..||++...   
T Consensus       342 ~na~~L~~~L~~~G~-~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L-~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~  419 (490)
T 2a7v_A          342 KNARAMADALLERGY-SLVSGGTDNHLVLVDLRPKGLDGARAERVL-ELVSITANKNTCPGDRSAITPGGLRLGAPALTS  419 (490)
T ss_dssp             HHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECTTTTCCHHHHHHHH-HHTTEECEEECCTTCCCSSSCSEEEEESHHHHH
T ss_pred             HHHHHHHHHHHHcCc-EEecCCCCCeEEEEEeCCCCCCHHHHHHHH-HhCCeEEecCccCCCCCCCCCCceEeccccccc
Confidence            999999999999865 544 33346788889876545677777655 58999998544332     35789997532   


Q ss_pred             --CCHHHHHHHHHHHHHHHHHH
Q 015768          367 --LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       367 --~~~~~~~~~~~~l~~~l~~~  386 (400)
                        .+++|++++++.|.+++...
T Consensus       420 ~g~~~~d~~~~~~~i~~~l~~~  441 (490)
T 2a7v_A          420 RQFREDDFRRVVDFIDEGVNIG  441 (490)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhh
Confidence              58899999999999998754

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.97  E-value=4e-29  Score=236.23  Aligned_cols=325  Identities=11%  Similarity=0.030  Sum_probs=222.2

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEE-eCChHHHHHHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQAFVNIVLT  108 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~-~~g~t~a~~~~~~~  108 (400)
                      +.++|+.+  +.++|+++++++.+... .....+.......++.+++.+++++.+|++ ++++++ |+|+|++++.++.+
T Consensus        40 ~~~~~~~~--~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~  116 (398)
T 2fyf_A           40 RDGRFGSG--PSKVRLEQLQTLTTTAA-ALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFG  116 (398)
T ss_dssp             SSCBCCSS--SCCCCHHHHHGGGTTTT-TTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHH
T ss_pred             CCccccCC--CCCCCHHHHHHHhhcCC-CccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHH
Confidence            44555543  33578899998876321 111100111122345677777777777887 468998 99999999999999


Q ss_pred             hcCCCCEEEEeCCCccc-hhHHHHhc--CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768          109 LCDAGDSVVMFAPYYFN-SYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (400)
Q Consensus       109 l~~~gd~vlv~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~  185 (400)
                      +.++| .+++..+.|.. ....+...  |.+++.+ +.+ ++...+.     .++++  +++|++++|+||||.++|.++
T Consensus       117 l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~g~~~~~-----~i~~~--~~~v~~~~~~nptG~~~~~~~  186 (398)
T 2fyf_A          117 LIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIII-TSD-PGSAPEP-----QTDPS--VDVIAWAHNETSTGVAVAVRR  186 (398)
T ss_dssp             TCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEE-ECC-TTCCCCC-----CCCTT--CSEEEEESEETTTTEECCCCC
T ss_pred             hcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEE-ecC-CCCCCCc-----cccCC--CCEEEEeCcCCCcceecchHH
Confidence            99887 23334444421 12234555  7788888 776 4443332     14444  499999999999999999555


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----  261 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----  261 (400)
                      +.++      +|+++|+|++|+.+...   ... . +.+++++|+||++|++| ++||++.+   +++++++....    
T Consensus       187 i~~~------~~~~vivD~a~~~~~~~---~~~-~-~~di~~~s~sK~~~~~g-g~g~l~~~---~~~~~~l~~~~~~~~  251 (398)
T 2fyf_A          187 PEGS------DDALVVIDATSGAGGLP---VDI-A-ETDAYYFAPQKNFASDG-GLWLAIMS---PAALSRIEAIAATGR  251 (398)
T ss_dssp             CTTC------C-CEEEEECTTTTTTSC---CCG-G-GCSEEEECTTSTTCSCS-SEEEEEEC---HHHHHHHHHHHHTTC
T ss_pred             hhhh------cCCeEEEEeccccCCcc---cCc-c-cCcEEEEecCcccCCCC-ceEEEEEC---HHHHHHhhcccccCC
Confidence            5443      89999999999865422   111 1 25688999999998664 58999988   67777664321    


Q ss_pred             -----------------ccCCcCccHHHHHHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHHhccCCCCcccC--C--CC
Q 015768          262 -----------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKG--G--EG  318 (400)
Q Consensus       262 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~~  318 (400)
                                       .....+++...+.++..+++...+.  +++..++++++++++.+.|++++++.+..  +  .+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~  331 (398)
T 2fyf_A          252 WVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRS  331 (398)
T ss_dssp             CCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBC
T ss_pred             CCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcC
Confidence                             1223456777777777777642232  67788889999999999999885545552  3  33


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      +.+++++++.. .+..++..+|. ++||.+.+|.....++++||+++. ++++++++++++|++++++
T Consensus       332 ~~~~~~~~~~~-~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~  397 (398)
T 2fyf_A          332 QVVGTIDFVDD-VDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER  397 (398)
T ss_dssp             SSEEEEEECTT-SCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCC-CCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            45889988653 36788888886 669999987433336799999996 7999999999999998764

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.97  E-value=8.8e-29  Score=228.01  Aligned_cols=276  Identities=18%  Similarity=0.107  Sum_probs=200.7

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCC
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~  147 (400)
                      ++++.+++++    |.+  +.++++++++|+..++.++.++||+|+++.|+|+++...+    +..|++++.+ +.    
T Consensus         2 ~l~~~la~~~----g~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~----   70 (331)
T 1pff_A            2 ALEGKIAKLE----HAE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI-DM----   70 (331)
T ss_dssp             HHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CT----
T ss_pred             hHHHHHHHHh----CCC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEe-CC----
Confidence            4677777776    554  4555555589999999999999999999999999887665    4589999888 65    


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~-~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                        .|++.+++.+++++  ++|++++|+||||.+++   +++|.++|++ +|+++|+|++|+.+.... +.   ..+.+++
T Consensus        71 --~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~-~~---~~~~d~~  139 (331)
T 1pff_A           71 --AVPGNIEKHLKPNT--RIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN-PL---DLGVDIV  139 (331)
T ss_dssp             --TSTTHHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC-GG---GGTCSEE
T ss_pred             --CCHHHHHHhhcCCC--eEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC-hh---hcCCcEE
Confidence              37788999887654  99999999999999999   9999999999 999999999999766532 11   3467899


Q ss_pred             EeccccccCCCcce-eEEEEccCCcH-HHHHHHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMGWR-VGYIAYPSEVE-GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       227 ~~s~sK~~g~~g~~-~G~i~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  303 (400)
                      ++|+||+++.+|.| +||++.+   + ++.+++...... .+.+.+++.+.++...++.    ...+.+....+.+.+.+
T Consensus       140 ~~s~~K~~~~~~~r~~G~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~  212 (331)
T 1pff_A          140 VHSATKYINGHTDVVAGLVCSR---ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT----LDMRVKRAAENAQKVAE  212 (331)
T ss_dssp             EEETTTTTSSSSSCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred             EEECccccCCCCCceEEEEEeC---cHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHHHHHH
Confidence            99999999888888 7999998   5 888888877665 4566777777776666653    23334444445555444


Q ss_pred             HhccC--------------CCCcccC---CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC---------cc---
Q 015768          304 ALSPL--------------GEGAVKG---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------AC---  354 (400)
Q Consensus       304 ~L~~~--------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~---------~~---  354 (400)
                      .|++.              +...+..   ...+.++.+.++    +.+++...+ +++||.+.+.+         .|   
T Consensus       213 ~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gI~~~~~s~g~~~sl~~~~~~~  287 (331)
T 1pff_A          213 FLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKKVL-DNCHVVSLAVSLGGPESLIQHPASM  287 (331)
T ss_dssp             HHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHH-HTCSSSEECSSCCSSSCEEECHHHH
T ss_pred             HHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHHHH-HhCCCceeccCCCCcceeeecchhh
Confidence            44332              1111111   112556677775    355666655 58999876542         11   


Q ss_pred             -------------C-CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          355 -------------G-CRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       355 -------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                                   + .++++|++++. +++++++.+++.|++
T Consensus       288 ~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~  329 (331)
T 1pff_A          288 THAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL  329 (331)
T ss_dssp             TSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             cccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence                         1 15899999998 777777777777654

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.97  E-value=9.4e-29  Score=231.13  Aligned_cols=305  Identities=16%  Similarity=0.179  Sum_probs=228.0

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCC
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPY  122 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~  122 (400)
                      .++++.+++.+.+...   .|.+..+..++++.+++++    |.  +++++++|+|+|+..++.++ .++||+|+++.++
T Consensus        14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~   84 (367)
T 3nyt_A           14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFV----GA--KYCISCANGTDALQIVQMALGVGPGDEVITPGFT   84 (367)
T ss_dssp             HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred             cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCc
Confidence            3567888888777653   3545666788888888887    43  48999999999999999999 8999999999999


Q ss_pred             ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768          123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV  202 (400)
Q Consensus       123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~  202 (400)
                      |+++...++..|++++.+ +.+++.+.+|++.+++.+++++  ++|+   |+||+|...+   +++|.++|++||+++|+
T Consensus        85 ~~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~  155 (367)
T 3nyt_A           85 YVATAETVALLGAKPVYV-DIDPRTYNLDPQLLEAAITPRT--KAII---PVSLYGQCAD---FDAINAIASKYGIPVIE  155 (367)
T ss_dssp             CTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEE
T ss_pred             cHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHhcCcCC--cEEE---eeCCccChhh---HHHHHHHHHHcCCEEEE
Confidence            999999999999999999 8887767889999999997654  7776   7889999988   88999999999999999


Q ss_pred             cccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCcC
Q 015768          203 DNTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPIC  267 (400)
Q Consensus       203 D~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~------------~~~~  267 (400)
                      |++|+.+. +.+..... ..  ++++.||  +|.+|.+|. .|+++.++  +++.+++......            .++.
T Consensus       156 D~a~~~g~~~~~~~~~~-~~--di~~~Sf~~~K~l~~~g~-gg~~~~~~--~~l~~~~~~~~~~g~~~~~~~~~~g~~~~  229 (367)
T 3nyt_A          156 DAAQSFGASYKGKRSCN-LS--TVACTSFFPSAPLGCYGD-GGAIFTND--DELATAIRQIARHGQDRRYHHIRVGVNSR  229 (367)
T ss_dssp             ECTTTTTCEETTEETTS-SS--SEEEEECCTTSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTEEETTEECSCCCBCC
T ss_pred             ECccccCCeECCeeccC-CC--CEEEEECCCCCcCCCcCc-eeEEEeCC--HHHHHHHHHHHhcCCCcCceeeccCcCCC
Confidence            99998543 33222111 11  5788886  899985465 88988865  7888887765432            3455


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCC----ceEEEeeCCCCCCCHHHHHHHHHH
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG----AIYLWARLPEKHLDDFEVVRWLAH  342 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~l~~  342 (400)
                      .+.+...++...++.    +++..++.+++++++.+.|++++. .+. .+.+    ...+.+.++    +.+++...|. 
T Consensus       230 ~~~~~aa~~~~~l~~----~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~-  299 (367)
T 3nyt_A          230 LDTLQAAILLPKLEI----FEEEIALRQKVAAEYDLSLKQVGI-GTPFIEVNNISVYAQYTVRMD----NRESVQASLK-  299 (367)
T ss_dssp             CCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCTTEECCCSSEEEECS----SHHHHHHHHH-
T ss_pred             ccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCe-eccCCCCCCceeeEEEEEEeC----CHHHHHHHHH-
Confidence            677777766666654    455666777778888888888753 222 1111    122344444    4678888775 


Q ss_pred             hcCeEEeCCCcc--------C------------CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          343 RHGVVVIPGGAC--------G------------CRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       343 ~~gi~v~~g~~~--------~------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      ++||.+.++...        .            ....+|++++. +|++|++..++.|++.
T Consensus       300 ~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          300 AAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             HHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             HCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence            789999876531        0            02479999887 8999999998888654

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.97  E-value=1.9e-27  Score=225.57  Aligned_cols=304  Identities=20%  Similarity=0.129  Sum_probs=211.0

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768           41 YWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (400)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv  118 (400)
                      .++.++.+.+++.   ... ...|+..  ...+++++.+++++    |.  +++++++|+++|++.++.++.++||+|++
T Consensus        31 ~~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~al~~l~~~gd~vi~  100 (412)
T 2cb1_A           31 GFKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALE----GA--LEAVVLASGQAATFAALLALLRPGDEVVA  100 (412)
T ss_dssp             CCSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHTTCCTTCEEEE
T ss_pred             ecCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEE
Confidence            3444555555443   222 3345432  23445555555554    64  48999999999999999999999999999


Q ss_pred             eCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768          119 FAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK  194 (400)
Q Consensus       119 ~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~  194 (400)
                      +.|+|++....+    +..|++++.+ +.       +++++++.+++++  ++|++++|+||+|.+.+   +++|.++|+
T Consensus       101 ~~~~~~~~~~~~~~~~~~~g~~~~~~-~~-------~~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~l~~  167 (412)
T 2cb1_A          101 AKGLFGQTIGLFGQVLSLMGVTVRYV-DP-------EPEAVREALSAKT--RAVFVETVANPALLVPD---LEALATLAE  167 (412)
T ss_dssp             ETTCCHHHHHHHHHTTTTTTCEEEEE-CS-------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred             eCCCchhHHHHHHHHHHHcCCEEEEE-CC-------CHHHHHHHhccCC--eEEEEeCCCCCCccccc---HHHHHHHHH
Confidence            999998877654    4578999888 54       3889999998655  99999999999999999   999999999


Q ss_pred             HcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc-H----------------------
Q 015768          195 AAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV-E----------------------  251 (400)
Q Consensus       195 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~-~----------------------  251 (400)
                      +||+++|+|++|+.+....   .....+.++++.|+||+++.+|.|+|+++..++. .                      
T Consensus       168 ~~~~~li~D~~~~~~~~~~---~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  244 (412)
T 2cb1_A          168 EAGVALVVDNTFGAAGALC---RPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALR  244 (412)
T ss_dssp             HHTCEEEEECGGGTTTTSC---CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHG
T ss_pred             HcCCEEEEECCCccccccC---CccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccc
Confidence            9999999999998662211   1223467899999999998788889987765421 0                      


Q ss_pred             --HHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CC-----------
Q 015768          252 --GFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GG-----------  316 (400)
Q Consensus       252 --~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-----------  316 (400)
                        ++.+.++... .......++...+++...++.    +..+.++..++.+++.+.|.+.+.+... .|           
T Consensus       245 ~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~  320 (412)
T 2cb1_A          245 ARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNA  320 (412)
T ss_dssp             GGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHH
T ss_pred             hHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH
Confidence              4445554433 222334455555555555543    4556666778889999999887665522 22           


Q ss_pred             -----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC---------ccC-----------------CCCeEEEEec
Q 015768          317 -----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------ACG-----------------CRGHLRISFG  365 (400)
Q Consensus       317 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~---------~~~-----------------~~~~iRi~~~  365 (400)
                           ..+.++.+.+ .   +.+.+...+ ++.||.+ .++         .|.                 .++.+|+|++
T Consensus       321 ~~~~~~~~~iv~~~~-~---~~~~~~~~l-~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g  394 (412)
T 2cb1_A          321 RKYLASGGPILTLDL-G---DLERASRFL-GAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVG  394 (412)
T ss_dssp             HHHCSSSCSEEEEEC-S---SHHHHHHHH-HHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECC
T ss_pred             HHhCCCCceEEEEEe-C---CHHHHHHHH-HhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEec
Confidence                 1245666777 3   455666544 5789998 663         221                 1579999999


Q ss_pred             c-CCHHHHHHHHHHHH
Q 015768          366 G-LVEDDCKAAADRLR  380 (400)
Q Consensus       366 ~-~~~~~~~~~~~~l~  380 (400)
                      . +++++++.+.+.|+
T Consensus       395 ~~~~~~~i~~l~~al~  410 (412)
T 2cb1_A          395 LEDPLDLLALFEEALE  410 (412)
T ss_dssp             SSCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHh
Confidence            8 66677766666664

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.97  E-value=5.8e-29  Score=233.08  Aligned_cols=307  Identities=13%  Similarity=0.099  Sum_probs=223.7

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~  123 (400)
                      ++++++++.+.+...   .|.+..+..++++.+++++    |.  +++++++|+|+|++.++.++ .++||+|+++.++|
T Consensus        16 ~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~   86 (373)
T 3frk_A           16 EYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYC----NV--NYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTF   86 (373)
T ss_dssp             HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHH----TS--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSC
T ss_pred             CHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCc
Confidence            577788888777653   2556667788999999987    43  48999999999999999999 89999999999999


Q ss_pred             cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      +++...++..|++++.+ +.+++++.+|++++++.+++++  ++|+   ++||+|...+   +++|.++|+++|+++|+|
T Consensus        87 ~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~--~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D  157 (373)
T 3frk_A           87 IATALAVSYTGAKPIFV-EPDIRTYNIDPSLIESAITEKT--KAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIED  157 (373)
T ss_dssp             THHHHHHHHHSCEEEEE-CEETTTTEECGGGTGGGCCTTE--EEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHHHHcCCEEEEE-eccccccCcCHHHHHHhcCCCC--eEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEE
Confidence            99999999999999999 8886667889999999997654  7777   6789999999   889999999999999999


Q ss_pred             cccccccc-CCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCcCc
Q 015768          204 NTYEYFMY-DGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPICA  268 (400)
Q Consensus       204 ~a~~~~~~-~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~------------~~~~~  268 (400)
                      ++|+.+.. .+...   ..-.++++.||+  |+++..| +.|+++.++  +++.+++......            .++..
T Consensus       158 ~a~~~g~~~~~~~~---~~~~d~~~~S~~~~K~l~~~g-~gg~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~  231 (373)
T 3frk_A          158 AAQAHGSLYKGMKV---GSLGDAAGFSFYPAKNLGSLG-DGGAVVTND--KDLAEKIKALSNYGSEKKYHHIYKGFNSRL  231 (373)
T ss_dssp             CTTCTTCEETTEET---TSSSSEEEEECCTTSSSCCSS-SCEEEEESC--HHHHHHHHHHHBTTCSBTTBCCSCCCBCCC
T ss_pred             CCcccCCEECCEec---cccccEEEEeCcCCCccCccc-eeEEEEeCC--HHHHHHHHHHHhcCcccCCccccccccCCC
Confidence            99985432 22111   111347778866  9986324 478888875  6677777655431            12233


Q ss_pred             cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCceE----EEeeCCCCCCCHHHHHHHHHHh
Q 015768          269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIY----LWARLPEKHLDDFEVVRWLAHR  343 (400)
Q Consensus       269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~l~~~  343 (400)
                      +.+...+....++.    +++..++.+++.+++.+.|++++ +.+... .+...    +.+..+    +.+++...|. +
T Consensus       232 ~~~~aa~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~-~  301 (373)
T 3frk_A          232 DELQAGFLRVKLKY----LDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSE----KRDELQKYLN-N  301 (373)
T ss_dssp             CHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEES----SHHHHHHHHH-H
T ss_pred             CHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeC----CHHHHHHHHH-H
Confidence            44444443333332    46677778888899999998876 343321 11111    222222    5778888775 7


Q ss_pred             cCeEEeCCCccC--C---------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          344 HGVVVIPGGACG--C---------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       344 ~gi~v~~g~~~~--~---------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      +||.+.++....  .                     .+.+|++++. +|++|++.+++.|++...+
T Consensus       302 ~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~  367 (373)
T 3frk_A          302 NGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE  367 (373)
T ss_dssp             TTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred             CCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence            899998765210  0                     1579999988 9999999999988876554

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.97  E-value=2e-29  Score=236.63  Aligned_cols=324  Identities=12%  Similarity=0.102  Sum_probs=231.3

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCc
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY  123 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~  123 (400)
                      .++++++++.+.+.++... + ......++.+++++.+.+.+|.+ +.+++++|+|++++.++..+ ++||+|++..++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~-h-~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~   84 (379)
T 3ke3_A            9 IDPNGLLEYSVVYTDRALN-H-MSKAFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGW   84 (379)
T ss_dssp             CSTTSCCCCCSSCCTTSCC-T-TSHHHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSH
T ss_pred             CCHHHHHHHHHhccCCCCC-C-CCHHHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCc
Confidence            3455555554444343221 1 22334567778888888888876 78999999999999998655 6899999999999


Q ss_pred             cchh--HHHHhcC--cEEEEeccCCCCC--------CCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768          124 FNSY--MSFQMTG--VTHILVGPCSSKT--------LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (400)
Q Consensus       124 ~~~~--~~~~~~g--~~~~~~~~~~~~~--------~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~  190 (400)
                      ++..  ..++..|  .+++.+ +.+.+|        ..+|++++++.+. .++  ++|++++++|++|.++|.+++++|.
T Consensus        85 ~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~--~~v~~~~~~~~~G~~~~~~~l~~i~  161 (379)
T 3ke3_A           85 FSYRWTQILEKGKFAKSSTVL-TAERTEDTEAPKPFAPVDIETAVAKIKEDKS--AIVYAPHVETSSGIILSEEYIKALS  161 (379)
T ss_dssp             HHHHHHHHHHHHCCSSEEEEE-ECEESSCCSSCCCEECCCHHHHHHHHHHHTC--SEEEEESEETTTTEECCHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCceEEE-eccccccccccCCCCCCCHHHHHHHHhhcCC--cEEEEEeecCCCceeCCHHHHHHHH
Confidence            7753  3455556  477777 654311        1479999999996 454  8999999999999999999999999


Q ss_pred             HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc--------
Q 015768          191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--------  262 (400)
Q Consensus       191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~--------  262 (400)
                      ++|++||+++|+|++++ +   +.+......+.++++.|++|+++ ++.++|+++.+   +++.+.+.....        
T Consensus       162 ~~~~~~~~~li~D~~~~-g---~~~~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~l~~~~~~~~~~~~~  233 (379)
T 3ke3_A          162 EAVHSVGGLLVIDCIAS-G---CVWLDMKELGIDVLISAPQKGWS-STPCAGLVMLS---AAAIKKVESTESNCFSLDLK  233 (379)
T ss_dssp             HHHHHTTCEEEEECTTC-T---TCCCCHHHHTCSEEEECTTTTTC-SCCCEEEEEEC---HHHHHHHHTCCCSCSTTCHH
T ss_pred             HHHHHcCCEEEEEeccc-C---CccccccccCCCEEEecchhhcC-CCCceEEEEEC---HHHHHhhhcCCCCceeecHH
Confidence            99999999999999986 2   22222223356789999999996 44568999988   677777654110        


Q ss_pred             --------------cCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEe
Q 015768          263 --------------NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWA  324 (400)
Q Consensus       263 --------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~  324 (400)
                                    ...++++...+.++.++++...+. ++++.++++++++++++.|++++. .+..+.   ......+
T Consensus       234 ~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~  312 (379)
T 3ke3_A          234 QWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGI-ESVAAEGFEAPGVVVS  312 (379)
T ss_dssp             HHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSBCTTCBCSSEEEE
T ss_pred             HHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCC-EecCCccccCceEEEE
Confidence                          012377888888877777642222 577888889999999999998865 443332   2223333


Q ss_pred             eCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-----CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .++.   ....+...| .++||.+.+|..|..     .+.+||+++. ++++|+++++++|+++++++.
T Consensus       313 ~~~~---~~~~~~~~L-~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~  377 (379)
T 3ke3_A          313 YTER---DDMHKGSAF-AEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL  377 (379)
T ss_dssp             ECSC---HHHHSSHHH-HHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             ccCC---cchHHHHHH-HHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence            4432   111224444 588999999876542     6799999886 799999999999999998865

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.97  E-value=1.2e-29  Score=241.82  Aligned_cols=326  Identities=15%  Similarity=0.134  Sum_probs=226.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||+.+.  ++++ .+|++++++.+.+.+..  .|+   +..+++.++++++.+.++ .++++++++|+++|+.
T Consensus        49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~  122 (424)
T 2e7u_A           49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATM  122 (424)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence            3567799998876  4444 68999999999987642  232   234566777777777765 5789999999999999


Q ss_pred             HHHHH---hcCCCCEEEEeCCCccchhHHHH-h-------------cCc------EEEEeccCCCCCCCCCHHHHHHhhc
Q 015768          104 NIVLT---LCDAGDSVVMFAPYYFNSYMSFQ-M-------------TGV------THILVGPCSSKTLHPDADWLEKTLE  160 (400)
Q Consensus       104 ~~~~~---l~~~gd~vlv~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~~~e~l~~~l~  160 (400)
                      .+++.   +.+ ++.|++.+|+|+++..... .             .|+      .++.+ |.      .|++.+++.++
T Consensus       123 ~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~  194 (424)
T 2e7u_A          123 SALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVL-EY------NDPEGLREVLK  194 (424)
T ss_dssp             HHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEE-CT------TCHHHHHHHHH
T ss_pred             HHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeC-CC------CCHHHHHHHHH
Confidence            99986   444 5789999999988654321 1             121      23444 32      27899999886


Q ss_pred             cC-CCCeEEEEeCCCC-CCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccC
Q 015768          161 TK-PTPKLVSVVNPGN-PSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       161 ~~-~~~~~v~l~~p~n-ptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g  235 (400)
                      .. ..+++ ++++|+| ++|.+ .+.+++++|.++ ++||+++|+||+|+++ ..+.....  .....+  +.|+||++|
T Consensus       195 ~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d--i~s~sK~l~  269 (424)
T 2e7u_A          195 RRGEEIAA-IIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPD--LVTLGKILG  269 (424)
T ss_dssp             HHGGGEEE-EEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCS--EEEECGGGG
T ss_pred             hCCCCEEE-EEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcc--hhhhhhhhh
Confidence            31 11344 4555654 48975 479999999999 9999999999999977 32322111  011122  338899998


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhh---ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----  308 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----  308 (400)
                       +|+|+||++++   +++++.+....   ...+++.|++++.++.++|+...+ .++..+++.++++++++.|+++    
T Consensus       270 -~G~~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~  344 (424)
T 2e7u_A          270 -GGLPAAAYAGR---REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE-NPGYYAYLEDLGARLEAGLKEVLKEK  344 (424)
T ss_dssp             -TTSSCEEEEEC---HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -CCcceEEEEEc---HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhC
Confidence             69999999998   77777665421   234667889999888888874211 1456677777778887777664    


Q ss_pred             CCCcccCCCCceEEEeeCCCCC------------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHH
Q 015768          309 GEGAVKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA  376 (400)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~  376 (400)
                      +......+. +.++|+.++...            .+..++...|+ ++||.+.++.    ...+|+++. .+++++++++
T Consensus       345 ~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~~i~~~l  417 (424)
T 2e7u_A          345 GLPHTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSN----FEAAFLSVA-HREEDVEKTL  417 (424)
T ss_dssp             TCCCEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSS----SSCEECCTT-CCHHHHHHHH
T ss_pred             CCceEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccC----CCceEeecc-CCHHHHHHHH
Confidence            543233444 678888886411            12446777776 7999999875    235777755 5999999999


Q ss_pred             HHHHHHH
Q 015768          377 DRLRRGL  383 (400)
Q Consensus       377 ~~l~~~l  383 (400)
                      ++|++++
T Consensus       418 ~~l~~~l  424 (424)
T 2e7u_A          418 EALRKAL  424 (424)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9998763

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.97  E-value=6.4e-28  Score=227.04  Aligned_cols=279  Identities=16%  Similarity=0.155  Sum_probs=203.3

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~  145 (400)
                      ..++++.+++++    |.+  +.++++++++|+..++.++.++||+|+++.|+|+++...    ++..|++++.+ +.  
T Consensus        61 ~~~l~~~la~~~----g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~--  131 (389)
T 3acz_A           61 VEQFEEMVCSIE----GAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI-DT--  131 (389)
T ss_dssp             HHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE-CT--
T ss_pred             HHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-CC--
Confidence            345555555554    654  677777888999999999999999999999999987765    57789999988 65  


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                          .|++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|++||+++|+|++|..+.... +   ...+.++
T Consensus       132 ----~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~-~---~~~~~di  198 (389)
T 3acz_A          132 ----SDVEKVKAAWKPNT--KMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK-P---LELGADI  198 (389)
T ss_dssp             ----TCHHHHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC-G---GGTTCSE
T ss_pred             ----CCHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC-c---cccCCeE
Confidence                28899999998755  99999999999999999   8999999999999999999998665421 2   2246779


Q ss_pred             EEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ++.|+||+++.+|.|+ ||++.++  +++++++.........+.++...+++...++.    +..+.++..++...+.+.
T Consensus       199 ~~~S~sK~~~~~~~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~~~~~l~~~  272 (389)
T 3acz_A          199 ALHSVSKYINGHGDVIGGVSSAKT--AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT----LPIRMQIHMENGLKVAKF  272 (389)
T ss_dssp             EEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHH
T ss_pred             EEECChhhccCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH----HHHHHHHHHHHHHHHHHH
Confidence            9999999998888897 9999883  27888877665434455677777777777764    344455566666666666


Q ss_pred             hccCCCC--------------cccC---CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC---C------Ccc----
Q 015768          305 LSPLGEG--------------AVKG---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---G------GAC----  354 (400)
Q Consensus       305 L~~~~~~--------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~---g------~~~----  354 (400)
                      |++++.+              .+..   ...+.++.+.++.    .++.. .++++.|+.+.+   |      ..|    
T Consensus       273 l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~----~~~~~-~~l~~~~i~~~~~s~G~~~sl~~~~~~~~  347 (389)
T 3acz_A          273 LEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS----FEAAK-KLMEHLKVCTLAVSLGCVDTLIEHPASMT  347 (389)
T ss_dssp             HHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS----HHHHH-HHHTTCSSSEEBSCCCCSSCEEECTTTTT
T ss_pred             HHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC----HHHHH-HHHHhCCCcEECcCCCCcccEeeCCcccc
Confidence            6654321              1111   1124566667752    34444 455678988876   4      222    


Q ss_pred             ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                                  + .++.+|+|++.   ++.++.++.|.++++
T Consensus       348 ~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~  387 (389)
T 3acz_A          348 HAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE  387 (389)
T ss_dssp             TSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred             cccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence                        1 15799999997   366677788877775

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.96  E-value=1.2e-28  Score=238.91  Aligned_cols=333  Identities=11%  Similarity=0.016  Sum_probs=236.6

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC---------CcEEEeCChHHHHHHHHHHhcCC----
Q 015768           46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDA----  112 (400)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~---------~~i~~~~g~t~a~~~~~~~l~~~----  112 (400)
                      ..+.+.+.+++.. ....|...++...+++++++++++.+|.+.         ..+++|+|+|+|+..++.++..+    
T Consensus        88 ~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~  166 (486)
T 1js3_A           88 AMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRR  166 (486)
T ss_dssp             HHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhh
Confidence            3455566666643 355566666678999999999999999874         36899999999999998876421    


Q ss_pred             -----CC----------EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC----CCeEEEEeCC
Q 015768          113 -----GD----------SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNP  173 (400)
Q Consensus       113 -----gd----------~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~----~~~~v~l~~p  173 (400)
                           ||          .|+++.++|+++...++..|++++.+ |.++ ++.+|+++|++.+++++    .|.+|++++|
T Consensus       167 ~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v-~~d~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~  244 (486)
T 1js3_A          167 LQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAI-PSDG-KFAMRASALQEALERDKAAGLIPFFVVATLG  244 (486)
T ss_dssp             HHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             hhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEe-ecCC-CCCCCHHHHHHHHHHHHhCCCCceEEEEeCC
Confidence                 42          37889999999999999999999999 8864 56899999999997443    1348888899


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  250 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~  250 (400)
                      +|++|.+.+   +++|+++|++||+++++|++|+.+.........   ...+.+.++.++||++++ +.++|+++.++  
T Consensus       245 ~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~-p~~~G~l~~~~--  318 (486)
T 1js3_A          245 TTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV-NFDCSAMWVKR--  318 (486)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESC--
T ss_pred             CCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC-CcceEEEEEeC--
Confidence            999999988   999999999999999999999976542211111   012345677899999974 48899999886  


Q ss_pred             HHH-HHHHH---Hhhcc-----------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          251 EGF-ATQLL---KVQDN-----------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       251 ~~~-~~~l~---~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      +.. .+.+.   .+...                 .+.....+.++++...+.  .+++.++.++..++++++.+.|++++
T Consensus       319 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~  396 (486)
T 1js3_A          319 RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG--VKGLQAYIRKHVQLSHEFEAFVLQDP  396 (486)
T ss_dssp             HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            443 23221   00000                 001123455565555553  46678888999999999999999887


Q ss_pred             CCcccC-CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768          310 EGAVKG-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       310 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++.+.. +. ..++.++++.......++..+|. +.|+.+..+..+...+++|++++.  ++++++++++++|+++++++
T Consensus       397 ~~~~~~~~~-~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~  474 (486)
T 1js3_A          397 RFEVCAEVT-LGLVCFRLKGSDGLNEALLERIN-SARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAEL  474 (486)
T ss_dssp             TEEECSCCC-SSEEEEEESSCHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEeCCCc-eeEEEEEecChHHHHHHHHHHHH-hcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            656654 44 44555566421001467777776 567554333334456799999754  68999999999999999988


Q ss_pred             hccCc
Q 015768          387 VKDGM  391 (400)
Q Consensus       387 ~~~~~  391 (400)
                      .++.+
T Consensus       475 ~~~~~  479 (486)
T 1js3_A          475 LAAEE  479 (486)
T ss_dssp             HC---
T ss_pred             Hhhhc
Confidence            76543

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.96  E-value=1.8e-28  Score=230.92  Aligned_cols=282  Identities=18%  Similarity=0.112  Sum_probs=198.4

Q ss_pred             CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCC
Q 015768           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCS  144 (400)
Q Consensus        69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~  144 (400)
                      ...++++.+++++    |.+  +.++++++++|++.++. +.++||+|+++.|+|++....    ++..|++++.+ |.+
T Consensus        56 ~~~~lr~~la~~~----g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~  127 (393)
T 1n8p_A           56 NRENLERAVAALE----NAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFT-NDL  127 (393)
T ss_dssp             HHHHHHHHHHHHT----TCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEE-SSH
T ss_pred             hHHHHHHHHHHHh----CCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEe-CCC
Confidence            3456666666665    544  56666667999999999 889999999999999876653    45678898888 654


Q ss_pred             CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEEcccccccccCCCCccccC
Q 015768          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA----GSWLVVDNTYEYFMYDGRKHCCVE  220 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~----~~~li~D~a~~~~~~~~~~~~~~~  220 (400)
                            | +++++.+++++  ++|++++|+||+|.++|   +++|.++|+++    |+++|+|++|+.+.... .   ..
T Consensus       128 ------d-~~l~~~i~~~t--~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~~-~---~~  191 (393)
T 1n8p_A          128 ------L-NDLPQLIKENT--KLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYISN-P---LN  191 (393)
T ss_dssp             ------H-HHHHHHSCSSE--EEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHCC-G---GG
T ss_pred             ------h-HHHHHhcccCc--eEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccCC-H---HH
Confidence                  6 78998887655  99999999999999999   89999999999    99999999999877642 1   22


Q ss_pred             CCcEEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          221 GDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       221 ~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      .+.++++.|+||.+|.+|+|+ ||++.++  +++++.+.........+.++....++...++.    +....++..++..
T Consensus       192 ~~~di~~~S~sK~~g~~G~rigG~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~  265 (393)
T 1n8p_A          192 FGADIVVHSATKYINGHSDVVLGVLATNN--KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----LHLRVRQAALSAN  265 (393)
T ss_dssp             GTCSEEEEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHH
T ss_pred             cCCeEEEEECcccccCCCCceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHHH
Confidence            357799999999999889998 9998853  67778777655433445566666666666654    4556666777788


Q ss_pred             HHHHHhccCCC-Cc-ccCC---------------C--C-ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----
Q 015768          300 IIREALSPLGE-GA-VKGG---------------E--G-AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----  354 (400)
Q Consensus       300 ~l~~~L~~~~~-~~-~~~~---------------~--~-~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----  354 (400)
                      .+.+.|++.+. +. +..|               .  . +.++++.++....+...+...+ +..++.+..|+.|     
T Consensus       266 ~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l-~~~~~~~s~G~~~s~~~~  344 (393)
T 1n8p_A          266 KIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASST-RLFTLAESLGGIESLLEV  344 (393)
T ss_dssp             HHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCCSSCEEEC
T ss_pred             HHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhC-CcceECCCCCCCcceeec
Confidence            88888877643 21 1111               1  2 5577788864211233444433 2345555444321     


Q ss_pred             -----C-------------CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          355 -----G-------------CRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       355 -----~-------------~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                           +             .++.+|+|++. .++++++.+.+.|++
T Consensus       345 p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~  390 (393)
T 1n8p_A          345 PAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ  390 (393)
T ss_dssp             TTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             cccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence                 1             14689999998 556666555555544

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.96  E-value=2.6e-28  Score=237.15  Aligned_cols=332  Identities=13%  Similarity=0.105  Sum_probs=237.5

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHh----c-------
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL----C-------  110 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l----~-------  110 (400)
                      +.++.+++++.....+.....|+..+...++++++.+++++.+|.++ +++++|+|+|+|+..++.++    .       
T Consensus       111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~  190 (497)
T 2qma_A          111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHS  190 (497)
T ss_dssp             CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccc
Confidence            35788888887666555455565555677899999999999999875 89999999999999999884    2       


Q ss_pred             --CC------CC-EEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCC
Q 015768          111 --DA------GD-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPG  174 (400)
Q Consensus       111 --~~------gd-~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~  174 (400)
                        ++      |+ .|+++.++|+++...++..|.   +++.+ |.+++ +.+|+++|++.+++.    +.+.+|++++++
T Consensus       191 ~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~  268 (497)
T 2qma_A          191 IQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTV-DANAD-GTMDITKLDEVIAQAKAEGLIPFAIVGTAGT  268 (497)
T ss_dssp             HHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SSBCGGGHHHHHHHHHHTTCEEEEEEEEBSC
T ss_pred             hhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEE-ecCCC-CcCCHHHHHHHHHHHHHCCCcceEEEEcCCC
Confidence              12      46 899999999999999888876   78888 88654 578999999998742    323478888999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccC-CCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  251 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~  251 (400)
                      |++|.+.+   +++|.++|++||+++++|++|+.+..... ..  ... ...++++.|+||+++. +.++|+++.++  +
T Consensus       269 ~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~-p~~~G~l~~~~--~  341 (497)
T 2qma_A          269 TDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQ-TISCGALLVND--K  341 (497)
T ss_dssp             TTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCC-CSSCEEEEESC--G
T ss_pred             CCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCC-CcceEEEEEeC--H
Confidence            99999988   99999999999999999999998765332 11  111 1346788899999974 46899998875  3


Q ss_pred             HHHHHHHHhhccC-C----------c------CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          252 GFATQLLKVQDNI-P----------I------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       252 ~~~~~l~~~~~~~-~----------~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      ...+.+....... .          +      ....+.++++...+  +.+++.++.++..++++++.+.|++++.+.+.
T Consensus       342 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  419 (497)
T 2qma_A          342 SNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV--GPKALGDMYDHLLAQTLEVADMIRTNDQFELL  419 (497)
T ss_dssp             GGGGGGCC--------------------CCSCCCTHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred             HHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence            3222221100000 0          0      00123334444444  35667888899999999999999998665654


Q ss_pred             CCCCceEEEeeCCCCCCCH----HHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKHLDD----FEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+....++++++.....+.    .++...+. +.|+.+.++..+.+.+++|+++ +. +++++++.++++|+++++++
T Consensus       420 ~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~-~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~  496 (497)
T 2qma_A          420 AEPSLSTVLFRATHETADLDELNKALRLEAL-TRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL  496 (497)
T ss_dssp             SCCSSSEEEEEECCSSSCHHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCceEEEEEEcCCccCHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence            3333556666765422122    34555564 7798887655555567999998 44 79999999999999988763

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.96  E-value=1.2e-27  Score=232.73  Aligned_cols=331  Identities=12%  Similarity=0.105  Sum_probs=234.9

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC--------CC-
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD--------AG-  113 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~--------~g-  113 (400)
                      ++.++..+.....+.....|...+....+++++.+++++.+|.+  ++++++|+|+|+|+..++.++..        +| 
T Consensus       105 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~  184 (504)
T 2okj_A          105 IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM  184 (504)
T ss_dssp             HHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred             HHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence            44444333333333334556555566778999999999999988  78999999999999999998853        56 


Q ss_pred             ----C-EEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCC
Q 015768          114 ----D-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       114 ----d-~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~  181 (400)
                          + .|+++.++|+++...++..|.   +++.+ |.+++ +.+|+++|++.+++    ...+++|++++++|++|.+.
T Consensus       185 ~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~~-~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~  262 (504)
T 2okj_A          185 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD  262 (504)
T ss_dssp             GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC
T ss_pred             cccCCeEEEECCcchHHHHHHHHHcCCCcccEEEE-ecCCC-CCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC
Confidence                6 799999999999999988876   78888 88654 57899999999874    11258999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-ccC--CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  258 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~  258 (400)
                      +   +++|.++|++||+++++|++|+.+........ ...  ...++++.|+||+++.| .++|+++.++  +++.+...
T Consensus       263 ~---l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~--~~~~~~~~  336 (504)
T 2okj_A          263 P---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGCN  336 (504)
T ss_dssp             C---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHHH
T ss_pred             C---HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEEC--HHHHHHHh
Confidence            8   89999999999999999999998775322211 111  24568888999999744 6899999885  34544322


Q ss_pred             Hhhc-cC----C----------------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--
Q 015768          259 KVQD-NI----P----------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--  315 (400)
Q Consensus       259 ~~~~-~~----~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--  315 (400)
                      .... ..    .                ...+.+.++++..++.  .+.+.++.++..++++++.+.|++++++++..  
T Consensus       337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  414 (504)
T 2okj_A          337 QMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--TVGFENQINKCLELAEYLYAKIKNREEFEMVFNG  414 (504)
T ss_dssp             CCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS
T ss_pred             cCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence            1110 00    0                0123566666666665  45678888999999999999999986656654  


Q ss_pred             -CCCceEEEeeCCCCCC--------------CHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEec-c-CCHHHHHHHHH
Q 015768          316 -GEGAIYLWARLPEKHL--------------DDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFG-G-LVEDDCKAAAD  377 (400)
Q Consensus       316 -~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~-~-~~~~~~~~~~~  377 (400)
                       |..+++++...+....              ...++...|. ++|+.+..+..+.. ++++|++++ . ++++|++.+++
T Consensus       415 ~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~  493 (504)
T 2okj_A          415 EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIE  493 (504)
T ss_dssp             CCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHH
T ss_pred             CCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHH
Confidence             5555655544442100              0345777776 66754332222332 368999997 4 79999999999


Q ss_pred             HHHHHHHHH
Q 015768          378 RLRRGLEEL  386 (400)
Q Consensus       378 ~l~~~l~~~  386 (400)
                      +|+++++++
T Consensus       494 ~l~~~~~~~  502 (504)
T 2okj_A          494 EIERLGQDL  502 (504)
T ss_dssp             HHHHHHTC-
T ss_pred             HHHHHHHHH
Confidence            999887653

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.96  E-value=1.3e-27  Score=232.25  Aligned_cols=330  Identities=12%  Similarity=0.101  Sum_probs=234.6

Q ss_pred             cHHHH-HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC----------
Q 015768           45 PKMAM-EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD----------  111 (400)
Q Consensus        45 ~~~v~-~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~----------  111 (400)
                      ++.++ +.+.+.+..+ ...|...++..++++++++|+++.+|.+  +..+++|+|+|+|+..++.++..          
T Consensus       108 ~~~~~~e~l~~~~~~~-~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G  186 (511)
T 3vp6_A          108 IIGLAGEWLTSTANTN-MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG  186 (511)
T ss_dssp             HHHHHHHHHHHHHCCC-SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred             HHHHHHHHHHHHhccC-CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence            44444 4455555443 5677777788899999999999999987  56899999999999999888754          


Q ss_pred             ----CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccC
Q 015768          112 ----AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       112 ----~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~  180 (400)
                          +++.|+++.++|+++...++..|.   +++.+ |.+++ +.+|+++|++.+++.    ..+++|++++++|++|.+
T Consensus       187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v-~~d~~-~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v  264 (511)
T 3vp6_A          187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF  264 (511)
T ss_dssp             GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred             cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEe-ecCCC-CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence                577999999999999999999998   88888 88755 588999999999743    125899999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      .+   +++|+++|++||+|+++|++|+.+...........   ...+.++.+++|+++.+ ..+|+++.++  +++.+..
T Consensus       265 d~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~--~~~~~~~  338 (511)
T 3vp6_A          265 DP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGC  338 (511)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHH
T ss_pred             cc---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeC--HHHHHHH
Confidence            88   99999999999999999999997665332221111   23467888999999744 6789888876  4554443


Q ss_pred             HHhhccC---------------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-
Q 015768          258 LKVQDNI---------------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-  315 (400)
Q Consensus       258 ~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-  315 (400)
                      .......                     +.....+..+++..++  +.++++++.+++.++++++++.|++++++++.. 
T Consensus       339 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~--g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~  416 (511)
T 3vp6_A          339 NQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK--GTVGFENQINKCLELAEYLYAKIKNREEFEMVFN  416 (511)
T ss_dssp             HCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSS
T ss_pred             hccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence            2111000                     0012345555555555  357788999999999999999999987666654 


Q ss_pred             --CCCceEEEeeCCCCCC----C----------HHHHHHHHHHhcCeEEeC-CCccCCCCeEEEEec-c-CCHHHHHHHH
Q 015768          316 --GEGAIYLWARLPEKHL----D----------DFEVVRWLAHRHGVVVIP-GGACGCRGHLRISFG-G-LVEDDCKAAA  376 (400)
Q Consensus       316 --~~~~~~~~~~~~~~~~----~----------~~~~~~~l~~~~gi~v~~-g~~~~~~~~iRi~~~-~-~~~~~~~~~~  376 (400)
                        |..+.+++.-.|....    +          ..++.++|. ++|+.+.. ....+..+++|++++ . ++.+|++.++
T Consensus       417 ~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll  495 (511)
T 3vp6_A          417 GEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLI  495 (511)
T ss_dssp             SCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHH
T ss_pred             CCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHH
Confidence              4444443322232110    0          235777776 56654432 111122357999984 3 7899999999


Q ss_pred             HHHHHHHHHH
Q 015768          377 DRLRRGLEEL  386 (400)
Q Consensus       377 ~~l~~~l~~~  386 (400)
                      +.|++.-+++
T Consensus       496 ~~i~~~~~~~  505 (511)
T 3vp6_A          496 EEIERLGQDL  505 (511)
T ss_dssp             HHHHHHHC--
T ss_pred             HHHHHHHHhh
Confidence            9888876554

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.96  E-value=6.4e-28  Score=227.80  Aligned_cols=285  Identities=19%  Similarity=0.222  Sum_probs=201.6

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  142 (400)
                      .++..++++++++++    |.+ +.+++++ +++|+..++. +.++||+|+++.|+|++....+    +..|++++.+ +
T Consensus        66 ~p~~~~l~~~la~~~----g~~-~~i~~~s-G~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-~  137 (403)
T 3cog_A           66 NPTRNCLEKAVAALD----GAK-YCLAFAS-GLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFV-D  137 (403)
T ss_dssp             CHHHHHHHHHHHHHH----TCS-EEEEESC-HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEE-C
T ss_pred             CchHHHHHHHHHHHh----CCC-cEEEECC-HHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEE-C
Confidence            345567888888877    543 4555554 5699999999 8899999999999998866543    5679999988 6


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEcccccccccCCCCccccCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~-~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                      .+      |++.+++.+++++  ++|++++|+||+|.+++   +++|.++|+++| +++|+|++|..+.+.. +   ...
T Consensus       138 ~~------d~~~l~~~i~~~t--~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~-~---~~~  202 (403)
T 3cog_A          138 CS------KIKLLEAAITPET--KLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR-P---LAL  202 (403)
T ss_dssp             TT------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC-T---TTT
T ss_pred             CC------CHHHHHHhcCcCC--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC-c---ccc
Confidence            54      7899999998655  99999999999999999   999999999999 9999999999765432 1   224


Q ss_pred             CcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +.++++.|+||+++.+| .++||++.++  +++.+++.........+.+++.++++...++.    +..+.+++.++...
T Consensus       203 ~~div~~S~sK~~~g~~~~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~n~~~  276 (403)
T 3cog_A          203 GADISMYSATKYMNGHSDVVMGLVSVNC--ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT----LHVRMEKHFKNGMA  276 (403)
T ss_dssp             TCSEEEEETTTTTTCSSCCCCEEEEECC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred             CCeEEEEcChhhccCCCCCeEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHH
Confidence            67899999999998655 5799999864  68888887766555666788888888888875    33445555556555


Q ss_pred             HHHHhccC--------------CCCcccCC----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC---CC-------
Q 015768          301 IREALSPL--------------GEGAVKGG----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GG-------  352 (400)
Q Consensus       301 l~~~L~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~---g~-------  352 (400)
                      +.+.|++.              +...+..+    .++++. +.++.   ..+... .++++.||.+..   |.       
T Consensus       277 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~-~~l~~---~~~~~~-~~l~~~~i~~~~~s~G~~~sl~~~  351 (403)
T 3cog_A          277 VAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVT-FYIKG---TLQHAE-IFLKNLKLFTLAESLGGFESLAEL  351 (403)
T ss_dssp             HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEE-EEESS---CHHHHH-HHHHHCSSSEECSCCSSSSCEEEC
T ss_pred             HHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEE-EEecC---CHHHHH-HHHHhCCcceEccCCCCcceeeec
Confidence            55555443              22222222    234444 46653   223444 445678886532   21       


Q ss_pred             ---cc------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          353 ---AC------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       353 ---~~------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                         ..            + .++++|||++.   ++.++.+++|.+++++..+
T Consensus       352 p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~d~i~~l~~al~~~~~  400 (403)
T 3cog_A          352 PAIMTHASVLKNDRDVLGISDTLIRLSVGL---EDEEDLLEDLDQALKAAHP  400 (403)
T ss_dssp             TTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHHHhhc
Confidence               11            1 15799999997   3445567777777766544

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.96  E-value=2.3e-28  Score=234.69  Aligned_cols=298  Identities=12%  Similarity=0.068  Sum_probs=215.8

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGAN-QAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--  144 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t-~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--  144 (400)
                      ..++.+++.+++++.+|++++ +++|+|+| .++..++.++..  +|+.|+++.++|+++...++..|++++.+ +..  
T Consensus       131 ~~~~~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~  208 (456)
T 2z67_A          131 MYALTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLV-ETVLD  208 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEE-CCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEE-EEecc
Confidence            456778888899988898876 99999999 566656666544  67889999999999999999999999988 763  


Q ss_pred             CCCCCCCHHHHHHhh-cc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--c
Q 015768          145 SKTLHPDADWLEKTL-ET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--V  219 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l-~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~  219 (400)
                      ++++.+|++++++.+ +.  ++.+.+|++++|+||+|.+.|   +++|.++|+++|+++++|++|+.+..+..+...  .
T Consensus       209 ~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~  285 (456)
T 2z67_A          209 GDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAF  285 (456)
T ss_dssp             TTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             CCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhh
Confidence            234578999999999 42  233577888899999999999   899999999999999999999866542111110  1


Q ss_pred             CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          220 EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       220 ~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      ..+.++++.|++|+++ ++.++|+++.++  +++++.+...........+.+.+.++...+.  .+++++..++..++++
T Consensus       286 ~~~~D~~~~s~hK~~~-~p~g~G~l~~~~--~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~--~~~~~~~~~~~~~~~~  360 (456)
T 2z67_A          286 KYRVDAVVSSSDKNLL-TPIGGGLVYSTD--AEFIKEISLSYPGRASATPVVNTLVSLLSMG--SKNYLELVKNQKNSKK  360 (456)
T ss_dssp             TSCCSEEEEEHHHHHC-CCSSCEEEEESC--HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCCCcC-CCCCeEEEEEcC--HHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence            1145678899999875 568899999964  6777777543322221233445555555553  3567888899999999


Q ss_pred             HHHHHhccCC---CCcccCCCCceEEEeeC--CCCCCCHHHHHHHHHHhcCe---EEe------CCCccC--CCCeEEEE
Q 015768          300 IIREALSPLG---EGAVKGGEGAIYLWARL--PEKHLDDFEVVRWLAHRHGV---VVI------PGGACG--CRGHLRIS  363 (400)
Q Consensus       300 ~l~~~L~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~gi---~v~------~g~~~~--~~~~iRi~  363 (400)
                      ++.+.|++++   +..+..+.  +++++.+  +.   ...++...|. ++||   .+.      +|..|.  ..+++|++
T Consensus       361 ~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~---~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s  434 (456)
T 2z67_A          361 LLDELLNDLSKKTGGKFLDVE--SPIASCISVNS---DPVEIAAKLY-NLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMN  434 (456)
T ss_dssp             HHHHHHHHHHHHSSCCBCCCC--CSSEEEEECSS---CHHHHHHHHH-HTTEESCEEECTTCHHHHTCSSCCSCCEEEEE
T ss_pred             HHHHHHHhcccccCCEecCCC--CeEEEEEeccc---HHHHHHHHHH-HcCCCcceEEeecCccccccccccCcchhhhh
Confidence            9999999873   34666665  4455555  32   1467887776 6675   443      122221  34799999


Q ss_pred             ecc-CCHHHHHHHHHHHHHHH
Q 015768          364 FGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       364 ~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      ++. ++++++++++++|++++
T Consensus       435 ~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          435 AAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             CCTTCCHHHHHHHHHHHHTC-
T ss_pred             hhcCCCHHHHHHHHHHHHHHh
Confidence            986 79999999999998754

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.96  E-value=1.3e-28  Score=237.79  Aligned_cols=327  Identities=13%  Similarity=0.073  Sum_probs=215.5

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----CEE
Q 015768           46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA-----G----DSV  116 (400)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~-----g----d~v  116 (400)
                      +++++++.+.+..+ ...|+...+..++++++++++    +  .+++++|+|+|+|++.++.++.++     |    |+|
T Consensus        53 ~~v~~a~~~~l~~~-~~~y~~~~~~~~l~~~la~~~----~--~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~I  125 (467)
T 2oqx_A           53 GAVTQSMQAAMMRG-DEAYSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMV  125 (467)
T ss_dssp             SCCCHHHHHHTTSC-CCCSSSCHHHHHHHHHHHHHH----C--CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCE
T ss_pred             HHHHHHHHHHhccC-cceeccCchhHHHHHHHHHHh----C--cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceE
Confidence            78888888887654 345766667788888888887    4  378999999999999999999888     8    998


Q ss_pred             EEeCCCc-cchhHHHHhcCcEEEEec-----cCC---CCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHH
Q 015768          117 VMFAPYY-FNSYMSFQMTGVTHILVG-----PCS---SKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPER  184 (400)
Q Consensus       117 lv~~p~~-~~~~~~~~~~g~~~~~~~-----~~~---~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~npt-G~~~~~~  184 (400)
                      ++. +.| .++.......|..++...     +.+   +..+.+|+++|++.+++.  ..+++|++++|+||+ |.+++.+
T Consensus       126 i~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~  204 (467)
T 2oqx_A          126 AFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLA  204 (467)
T ss_dssp             EEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHH
T ss_pred             Eec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHH
Confidence            877 444 333444555666655430     111   123467999999999741  124999999999997 8999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccc-c---------ccCCCCccccC----CCcEEEEeccccccCCC-cceeEEEEccCC
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEY-F---------MYDGRKHCCVE----GDHVVNLFSFSKAYGMM-GWRVGYIAYPSE  249 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~-~---------~~~~~~~~~~~----~~~~i~~~s~sK~~g~~-g~~~G~i~~~~~  249 (400)
                      ++++|.++|++||+++|+|+++.. .         .+.+.......    ...++++.|+||++|++ |   ||+++++.
T Consensus       205 ~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~~~  281 (467)
T 2oqx_A          205 NLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG---GLLCMKDD  281 (467)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC---EEEEECSG
T ss_pred             HHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc---eEEEecCh
Confidence            999999999999999999977654 1         22222111110    11235678999999765 3   78887742


Q ss_pred             -cHHHHHHHHHhh--cc--CCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768          250 -VEGFATQLLKVQ--DN--IPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  323 (400)
Q Consensus       250 -~~~~~~~l~~~~--~~--~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  323 (400)
                       ..+...++....  ..  ..+ ..+.....++...++...+  ++..++..++++++.+.|++++ +.+. +.+++++|
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~-~~~~-~~~~~~~~  357 (467)
T 2oqx_A          282 SFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRIAQVQYLVDGLEEIG-VVCQ-QAGGHAAF  357 (467)
T ss_dssp             GGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTT-CCEE-EECSSCEE
T ss_pred             hHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh--HHHHHHHHHHHHHHHHHHHHCC-Ceee-cCCceEEE
Confidence             113444444332  11  111 1233333333333322111  1234455677888888888774 4555 66678888


Q ss_pred             eeCCC--CCCC-----HHHHHHHHHHhcCeEEeCCCcc--C-----------CCCeEEEEecc--CCHHHHHHHHHHHHH
Q 015768          324 ARLPE--KHLD-----DFEVVRWLAHRHGVVVIPGGAC--G-----------CRGHLRISFGG--LVEDDCKAAADRLRR  381 (400)
Q Consensus       324 ~~~~~--~~~~-----~~~~~~~l~~~~gi~v~~g~~~--~-----------~~~~iRi~~~~--~~~~~~~~~~~~l~~  381 (400)
                      +.++.  ...+     ..++..+|+.++||.+.|+..|  +           ..+++|++++.  ++++++++++++|++
T Consensus       358 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~  437 (467)
T 2oqx_A          358 VDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKH  437 (467)
T ss_dssp             EEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHH
T ss_pred             EechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHH
Confidence            88742  1112     3445777746899999985532  1           13799999984  589999999999999


Q ss_pred             HHHHHh
Q 015768          382 GLEELV  387 (400)
Q Consensus       382 ~l~~~~  387 (400)
                      ++++..
T Consensus       438 ~l~~~~  443 (467)
T 2oqx_A          438 VKENAA  443 (467)
T ss_dssp             HHHSGG
T ss_pred             HHhhhh
Confidence            998754

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.3e-27  Score=230.93  Aligned_cols=331  Identities=11%  Similarity=0.045  Sum_probs=240.8

Q ss_pred             cHHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC----------cEEEeCChHHHHHHHHHHhcC--
Q 015768           45 PKMAMEK-VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS----------SVMVTAGANQAFVNIVLTLCD--  111 (400)
Q Consensus        45 ~~~v~~a-~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~----------~i~~~~g~t~a~~~~~~~l~~--  111 (400)
                      ++.++.. +...+.. ....|...++..++++++.+++.+.+|.+..          ..++|+|+|+++..++.+.+.  
T Consensus        91 ~~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~  169 (481)
T 4e1o_A           91 WPSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNK  169 (481)
T ss_dssp             HHHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHH
Confidence            4455544 4555444 4567777788899999999999999998643          679999999999998887642  


Q ss_pred             -----------------CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEE
Q 015768          112 -----------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSV  170 (400)
Q Consensus       112 -----------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l  170 (400)
                                       +++.|+++.++|.++...++..|.+++.+ |.++ ++.+|+++|++.|++.    ..+.+|++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v-~~~~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~  247 (481)
T 4e1o_A          170 ILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFL-PVDD-NFSLRGEALQKAIEEDKQRGLVPVFVCA  247 (481)
T ss_dssp             HHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEE-EcCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence                             56799999999999999999899999999 8864 4589999999999743    11477888


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC---CcEEEEeccccccCCCcceeEEEEcc
Q 015768          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLFSFSKAYGMMGWRVGYIAYP  247 (400)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~g~~~G~i~~~  247 (400)
                      +.++|++|.+.|   +++|+++|++||+++++|++|+.+............   ..+.++.++||+++.| ..+|+++.+
T Consensus       248 ~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~  323 (481)
T 4e1o_A          248 TLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVK  323 (481)
T ss_dssp             EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred             ecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEe
Confidence            889999999988   999999999999999999999876543222211111   2367788999999744 567887777


Q ss_pred             CCcHHHHHHHHH----hhcc---------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768          248 SEVEGFATQLLK----VQDN---------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       248 ~~~~~~~~~l~~----~~~~---------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      +  +........    +...               .+.....+.++++...+.  .+.++++.++..++++++++.|+++
T Consensus       324 ~--~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~  399 (481)
T 4e1o_A          324 D--KYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG--VKNLQAHVRHGTEMAKYFESLVRND  399 (481)
T ss_dssp             B--HHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             C--HHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5  444322110    0000               000113455666665553  4667889999999999999999998


Q ss_pred             CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC-eEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768          309 GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG-VVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~  385 (400)
                      +++++..+....+++++++.......++.++|. +.| +.+.|+. ..+..++|++++.  ++++|++.++++|++++++
T Consensus       400 ~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~  477 (481)
T 4e1o_A          400 PSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIA-KAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATL  477 (481)
T ss_dssp             TTEECCSCCCSSEEEEEESSCHHHHHHHHHHHH-HHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCceeEEEEEeCCchHHHHHHHHHHH-hCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            776776555577778887542223567888776 455 5555433 2345789999775  5899999999999999987


Q ss_pred             Hhc
Q 015768          386 LVK  388 (400)
Q Consensus       386 ~~~  388 (400)
                      +.+
T Consensus       478 l~~  480 (481)
T 4e1o_A          478 ILS  480 (481)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            653

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.96  E-value=6.7e-27  Score=220.62  Aligned_cols=310  Identities=13%  Similarity=0.101  Sum_probs=220.9

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCC
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAP  121 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p  121 (400)
                      ++++++++.+.+.++    |.+..|  ..++++++++++    |.  +++++++|+++|++.++.++ .++||+|+++.|
T Consensus        11 ~~~v~~a~~~~~~~~----~~~~~g~~~~~l~~~la~~~----~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~   80 (394)
T 1o69_A           11 GGNELKYIEEVFKSN----YIAPLGEFVNRFEQSVKDYS----KS--ENALALNSATAALHLALRVAGVKQDDIVLASSF   80 (394)
T ss_dssp             -CCHHHHHHHHHHHT----TTSCTTHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHHcC----CccCCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCC
Confidence            467888888887642    444456  788888888887    43  78999999999999999999 899999999999


Q ss_pred             CccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015768          122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL  200 (400)
Q Consensus       122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l  200 (400)
                      +|+++...++..|++++.+ +.+ +++.+|++.+++.+++.. .+++|++++   |+|...+   +++|.++|+++|+++
T Consensus        81 ~~~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~l  152 (394)
T 1o69_A           81 TFIASVAPICYLKAKPVFI-DCD-ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDIVL  152 (394)
T ss_dssp             SCGGGTHHHHHTTCEEEEE-CBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEE
T ss_pred             ccHHHHHHHHHcCCEEEEE-EeC-CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCEE
Confidence            9999999999999999999 887 456789999999987521 248998875   8998888   899999999999999


Q ss_pred             EEccccc-ccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-----c--------
Q 015768          201 VVDNTYE-YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP-----I--------  266 (400)
Q Consensus       201 i~D~a~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-----~--------  266 (400)
                      |+|++|+ ++.+.+..... ..+.++...|.+|.++  |.++||+++++  +++++.+........     +        
T Consensus       153 i~Dea~~~g~~~~~~~~~~-~~~~~~~s~s~~K~l~--~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~g~~  227 (394)
T 1o69_A          153 IEDAAEALGSFYKNKALGT-FGEFGVYSYNGNKIIT--TSGGGMLIGKN--KEKIEKARFYSTQARENCLHYEHLDYGYN  227 (394)
T ss_dssp             EEECTTCTTCEETTEETTS-SSSEEEEECCTTSSSC--CSSCEEEEESC--HHHHHHHHHHTBTCCCSSSSCCCSSCCCB
T ss_pred             EEECcCcccceeCCccccc-ccCcEEEEEeCCccCC--CCCceEEEECC--HHHHHHHHHHHHhccccCccccccccCcc
Confidence            9999998 44444322111 1234455555578664  66899999964  678888776543211     0        


Q ss_pred             -CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----Cce-EEEeeCCCC-----------
Q 015768          267 -CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAI-YLWARLPEK-----------  329 (400)
Q Consensus       267 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~-~~~~~~~~~-----------  329 (400)
                       ..+.....++...++    ++++..++.+++++++.+.|+++  +.+.++.    .++ ++++.++..           
T Consensus       228 ~~~~~~~aa~~l~~l~----~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  301 (394)
T 1o69_A          228 YRLSNVLGAIGVAQME----VLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDI  301 (394)
T ss_dssp             CBCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEE
T ss_pred             cCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccc
Confidence             022233333322333    35667788899999999999887  3444331    122 356666532           


Q ss_pred             ---------CCCHHHHHHHHHHhcCeEEeCCCccC------CC--------------CeEEEEecc-CCHHHHHHHHHHH
Q 015768          330 ---------HLDDFEVVRWLAHRHGVVVIPGGACG------CR--------------GHLRISFGG-LVEDDCKAAADRL  379 (400)
Q Consensus       330 ---------~~~~~~~~~~l~~~~gi~v~~g~~~~------~~--------------~~iRi~~~~-~~~~~~~~~~~~l  379 (400)
                               ..+.+++...|. ++||.+++|..+.      ..              ..+|+..+. +|++|++.+++.|
T Consensus       302 ~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l  380 (394)
T 1o69_A          302 NISQKNITLHPKISKLIEDLK-NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLI  380 (394)
T ss_dssp             ECCCCCCCCCHHHHHHHHHHH-HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred             cccccccccccCHHHHHHHHH-HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHH
Confidence                     114567887775 7899999985331      00              345555555 8999999999988


Q ss_pred             HHHHH
Q 015768          380 RRGLE  384 (400)
Q Consensus       380 ~~~l~  384 (400)
                      ++++.
T Consensus       381 ~~~~~  385 (394)
T 1o69_A          381 LKSIK  385 (394)
T ss_dssp             HHHHC
T ss_pred             HHHHh
Confidence            87654

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.96  E-value=9.9e-28  Score=231.12  Aligned_cols=334  Identities=10%  Similarity=0.008  Sum_probs=239.2

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC---------cEEEeCChHHHHHHHHHHhcC---
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS---------SVMVTAGANQAFVNIVLTLCD---  111 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~---------~i~~~~g~t~a~~~~~~~l~~---  111 (400)
                      .++.++..+.....+.....|...++..++++++.+++.+.+|.+.+         ..++|+|+|+++..++.+.+.   
T Consensus        85 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~  164 (475)
T 3k40_A           85 SYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKL  164 (475)
T ss_dssp             CHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHH
Confidence            34455544444444444566777788889999999999999998753         689999999999988887631   


Q ss_pred             ----------------CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEe
Q 015768          112 ----------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVV  171 (400)
Q Consensus       112 ----------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~  171 (400)
                                      +++.|+++..+|.++...++..|++++.+ |.++++  +|+++|++.|++.    ..+.+|+++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v-~~d~~~--~d~~~L~~~i~~~~~~~~~~~~v~~~  241 (475)
T 3k40_A          165 KEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSV-QSENHR--MRGAALEKAIEQDVAEGLIPFYAVVT  241 (475)
T ss_dssp             HHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEE-CCBTTB--CCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEE-ECCCCC--cCHHHHHHHHHHHHHCCCccEEEEEE
Confidence                            34689999999999999999999999999 887654  8999999999743    114678888


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC---CCcEEEEeccccccCCCcceeEEEEccC
Q 015768          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      .++|++|.+.|   +++|+++|++||+++++|++|+.+...........   ...+.+..++||+++ .+..+|+++.++
T Consensus       242 ~~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~~  317 (475)
T 3k40_A          242 LGTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWML-VNFDCSAMWLKD  317 (475)
T ss_dssp             BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESS
T ss_pred             ecCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccC-CCCceEEEEEeC
Confidence            99999999988   99999999999999999999987543222211111   134678889999986 446678887775


Q ss_pred             CcHHHH-HHHHH---hhcc---------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          249 EVEGFA-TQLLK---VQDN---------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       249 ~~~~~~-~~l~~---~~~~---------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                        ++.. +.+..   +...               .+.....+.++++...+.  .+.++++.++..++++++++.|++++
T Consensus       318 --~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~  393 (475)
T 3k40_A          318 --PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG--VENLQAHIRRHCNFAKQFGDLCVADS  393 (475)
T ss_dssp             --GGGC---------------------------CCCGGGTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred             --HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence              3221 21110   0000               000112444555555553  45678888999999999999999987


Q ss_pred             CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHh
Q 015768          310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ++++..+....+++++++.......++..+|.++.++.+.|+.. .+..++|++++.  ++++|++.++++|+++++++.
T Consensus       394 g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~  472 (475)
T 3k40_A          394 RFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKI-KDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEME  472 (475)
T ss_dssp             TEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEE-TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            76776655567777777542223567888887544445555433 346799999775  589999999999999998876


Q ss_pred             cc
Q 015768          388 KD  389 (400)
Q Consensus       388 ~~  389 (400)
                      ++
T Consensus       473 ~~  474 (475)
T 3k40_A          473 QE  474 (475)
T ss_dssp             TC
T ss_pred             cc
Confidence            53

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.96  E-value=9.6e-28  Score=227.43  Aligned_cols=285  Identities=19%  Similarity=0.133  Sum_probs=198.5

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCC
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKT  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~  147 (400)
                      ...+++.+.+++..|.  +..++++++++|+..++.++.++||+|+++.|+|.++..    .++..|++++.+ +.+   
T Consensus        82 p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v-~~~---  155 (430)
T 3ri6_A           82 PTVEDLEQRLKNLTGA--LGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV-DVM---  155 (430)
T ss_dssp             HHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE-CTT---
T ss_pred             HHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CCC---
Confidence            4444555555555564  346777788899999999999999999999999998887    667889999998 654   


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                         |++++++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+.....    .....+.++++
T Consensus       156 ---d~~~l~~ai~~~t--~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~~~~g~div~  223 (430)
T 3ri6_A          156 ---DSLAVEHACDETT--KLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EAKRLGVDIEV  223 (430)
T ss_dssp             ---CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CGGGGTCSEEE
T ss_pred             ---CHHHHHHhhCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----ChHHcCCEEEE
Confidence               7899999998765  99999999999999999   889999999999999999999854431    22234567999


Q ss_pred             eccccccCCCcce-eEEEEccCC--c------HH---------HHHHHHH-hhccCCcCccHHHHHHHHHHhcCCcHHHH
Q 015768          228 FSFSKAYGMMGWR-VGYIAYPSE--V------EG---------FATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVT  288 (400)
Q Consensus       228 ~s~sK~~g~~g~~-~G~i~~~~~--~------~~---------~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  288 (400)
                      .|+||++|.+|.. .|+++.+.+  .      ++         ++.++.. ........+++...+.+...+    +.+.
T Consensus       224 ~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l----~~l~  299 (430)
T 3ri6_A          224 LSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL----ETMA  299 (430)
T ss_dssp             EECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH----HHHH
T ss_pred             ECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh----hhHH
Confidence            9999999755544 455553221  1      11         1222221 111223334555544444444    3466


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCC
Q 015768          289 ERVKDLVRNREIIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG  351 (400)
Q Consensus       289 ~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g  351 (400)
                      .+.++..+++..+.+.|++.+.+. +..|.                +++++++.++. ..+..++++.+ +-.++.+.+|
T Consensus       300 ~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~~~l-~~~~~~~s~G  377 (430)
T 3ri6_A          300 LRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFMDAL-KLIRRATNIH  377 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHHHHC-SSSEECSCCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHHHhC-CcceecCCCC
Confidence            777888899999999999887654 33332                34488999972 22344555544 3456666777


Q ss_pred             CccC-----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          352 GACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       352 ~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ..+.                       .++.||+|++.   |+.+++++.|++++
T Consensus       378 ~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~dl~~al  429 (430)
T 3ri6_A          378 DNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKEDILQAL  429 (430)
T ss_dssp             CSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred             CCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence            6553                       25689999997   55566777777765

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.96  E-value=2.9e-27  Score=223.42  Aligned_cols=282  Identities=15%  Similarity=0.063  Sum_probs=191.9

Q ss_pred             HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCC
Q 015768           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTL  148 (400)
Q Consensus        73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~  148 (400)
                      ..+++++.+++..|.  ++.++++|+++|++.++.+++++||+|+++.+.|++....+    +..|+++.++ +.+    
T Consensus        83 ~~~~le~~lA~l~g~--~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v-~~~----  155 (415)
T 2fq6_A           83 THFSLQQAMCELEGG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWF-DPL----  155 (415)
T ss_dssp             HHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CTT----
T ss_pred             hHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEE-CCC----
Confidence            334444444444464  45777789999999999999999999999999999887654    4579999888 543    


Q ss_pred             CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                        |++++++++++++  ++|++++|+||+|.++|   +++|+++|++  +|+++|+|++|+.+... .+   ...+.+++
T Consensus       156 --d~~~le~ai~~~t--klV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~-~p---~~~g~Div  224 (415)
T 2fq6_A          156 --IGADIVKHLQPNT--KIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF-KA---LDFGIDVS  224 (415)
T ss_dssp             --CGGGGGGGCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS-CG---GGGTCSEE
T ss_pred             --CHHHHHHhhccCC--cEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC-Cc---cccCCeEE
Confidence              7889999998765  99999999999999999   8999999999  99999999999855322 11   23456799


Q ss_pred             EeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768          227 LFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  305 (400)
Q Consensus       227 ~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  305 (400)
                      +.|+||.+|.+|.+ +||++.+   +++++++..........+++...+.+...++    .+..+.++..++...+.+.|
T Consensus       225 ~~S~sK~lg~~g~~~~G~l~~~---~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~----~l~~r~~~~~~n~~~l~~~L  297 (415)
T 2fq6_A          225 IQAATKYLVGHSDAMIGTAVCN---ARCWEQLRENAYLMGQMVDADTAYITSRGLR----TLGVRLRQHHESSLKVAEWL  297 (415)
T ss_dssp             EEETTTTTTCSSSCCCEEEEEC---TTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCccccCCCCCceEEEEEeC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHH
Confidence            99999999866644 6999887   4566666655443333445554444444443    35666777788888888888


Q ss_pred             ccCCCCc-ccCC----------------CCceEEEeeCCCC--CCCHHHHHHHHHHhcCeEEeCCCc-------------
Q 015768          306 SPLGEGA-VKGG----------------EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGA-------------  353 (400)
Q Consensus       306 ~~~~~~~-~~~~----------------~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~-------------  353 (400)
                      ++.+.+. +..|                ..+..+++.++..  ..+...+...+ +-.++.+..|+.             
T Consensus       298 ~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l-~~~~~a~s~G~~~s~~~~~~p~~~s  376 (415)
T 2fq6_A          298 AEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNF-SLFSMAYSWGGYESLILANQPEHIA  376 (415)
T ss_dssp             HTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTC-SSCEECSCCCSSSCEEEEECHHHHH
T ss_pred             HcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhC-CcCeEeccCCCCceeEEecCCCccc
Confidence            8765321 1111                1356677788642  11223333322 223455554522             


Q ss_pred             -------cC-CCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768          354 -------CG-CRGHLRISFGG-LVEDDCKAAADRLR  380 (400)
Q Consensus       354 -------~~-~~~~iRi~~~~-~~~~~~~~~~~~l~  380 (400)
                             .+ .++.+|||++. .++++++++.+.|+
T Consensus       377 ~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~  412 (415)
T 2fq6_A          377 AIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA  412 (415)
T ss_dssp             TTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHH
T ss_pred             cccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence                   11 24789999998 44454444444443

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.96  E-value=6.2e-27  Score=220.35  Aligned_cols=286  Identities=20%  Similarity=0.154  Sum_probs=205.7

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-----hcCcEEEEeccCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-----MTGVTHILVGPCS  144 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-----~~g~~~~~~~~~~  144 (400)
                      .....+++++.+++..|.  ++.++++++++|+.. +..+.++||+|+++.++|.+....+.     ..|++++.+ +.+
T Consensus        65 ~~p~~~~l~~~la~l~g~--~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v-~~~  140 (400)
T 3nmy_A           65 HNPTRFAYERCVAALEGG--TRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV-DLT  140 (400)
T ss_dssp             CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE-CTT
T ss_pred             CCHHHHHHHHHHHHHhCC--CCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE-CCC
Confidence            344555566666655564  367788888999998 56788999999999999987776644     459999888 653


Q ss_pred             CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV  224 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  224 (400)
                            |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|++||+++|+|++|+.+.....    ...+.+
T Consensus       141 ------d~~~l~~~i~~~~--~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~----~~~g~d  205 (400)
T 3nmy_A          141 ------DPAAFKAAIRADT--KMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRP----LSLGAD  205 (400)
T ss_dssp             ------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCG----GGGTCS
T ss_pred             ------CHHHHHHHhccCC--CEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCCh----hhcCCc
Confidence                  7899999998765  99999999999999999   99999999999999999999986544321    223567


Q ss_pred             EEEeccccccCCCcceeEE--EEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          225 VNLFSFSKAYGMMGWRVGY--IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       225 i~~~s~sK~~g~~g~~~G~--i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      +++.|++|+++.+|.++|.  ++..+  +++.+++.......+...++...+++...++.    +..+.+++.+++..+.
T Consensus       206 iv~~S~sK~l~g~g~~~gG~~vv~~~--~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~----l~~r~~~~~~~a~~l~  279 (400)
T 3nmy_A          206 LVVHSATKYLNGHSDMVGGIAVVGDN--AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT----LPLRMRAHCENALALA  279 (400)
T ss_dssp             EEEEETTTTTTCSSSCCCEEEEECSC--HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred             EEEecCccccCCCCCcceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHH
Confidence            9999999999867666544  55544  78888887776656667788877777777765    5667778888999999


Q ss_pred             HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----------
Q 015768          303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------  355 (400)
Q Consensus       303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------  355 (400)
                      +.|++.+.+. +..|                ..|.++++.++.......++...+ +-.++.+..|..+.          
T Consensus       280 ~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p~~~~~  358 (400)
T 3nmy_A          280 QWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKT-ELFTLAESLGGVESLVNHPAVMTH  358 (400)
T ss_dssp             HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTT
T ss_pred             HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcC-CcceEecCCCCCcceeeCcccccc
Confidence            9999876532 2222                126678888864211123344333 23344444444321          


Q ss_pred             -------------CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          356 -------------CRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       356 -------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                                   .++.+|+|++.   |+.+++++.|++++.
T Consensus       359 ~~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~  397 (400)
T 3nmy_A          359 ASIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV  397 (400)
T ss_dssp             TTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred             ccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence                         24689999997   455566777887775

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.96  E-value=8.1e-28  Score=231.66  Aligned_cols=339  Identities=12%  Similarity=0.070  Sum_probs=230.0

Q ss_pred             hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      .+|+.++||..|..  .++ .+|++++++.+.+...   ....|+. ....++++++++++.+..+...+++++++|+++
T Consensus        60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse  138 (472)
T 1ohv_A           60 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGMSQLITMACGSC  138 (472)
T ss_dssp             TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             CCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence            45788999988763  344 6899999998876421   1123432 345789999999888776556789999999999


Q ss_pred             HHHHHHHHhc--------C-----------------CC---CEEEEeCCCccchhHHH-HhcCcE-------------EE
Q 015768          101 AFVNIVLTLC--------D-----------------AG---DSVVMFAPYYFNSYMSF-QMTGVT-------------HI  138 (400)
Q Consensus       101 a~~~~~~~l~--------~-----------------~g---d~vlv~~p~~~~~~~~~-~~~g~~-------------~~  138 (400)
                      |++.+++++.        .                 ||   +.|++.+++|++..... ...|..             .+
T Consensus       139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~  218 (472)
T 1ohv_A          139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  218 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred             HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence            9999998873        1                 45   89999999999876544 333321             11


Q ss_pred             EeccCCCCC------C-----CCCHHHHHHhhccC----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEE
Q 015768          139 LVGPCSSKT------L-----HPDADWLEKTLETK----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVV  202 (400)
Q Consensus       139 ~~~~~~~~~------~-----~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~  202 (400)
                      .+ |.....      +     ..|+++|++.+++.    ..+++|+++..+|++|. ..+.+++++|.++|++||+++|+
T Consensus       219 ~~-p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~  297 (472)
T 1ohv_A          219 PF-PRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV  297 (472)
T ss_dssp             CC-CCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             CC-CcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence            22 211000      0     12578888888741    12488888777888996 57899999999999999999999


Q ss_pred             cccccccccCCCCccccCCCcE--EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHh
Q 015768          203 DNTYEYFMYDGRKHCCVEGDHV--VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL  280 (400)
Q Consensus       203 D~a~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  280 (400)
                      ||+|.++...+........+..  +.+.|+||++ ++|   ||++ +   +++. .+.......+++.+++++.++.++|
T Consensus       298 DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~-l~G---G~~~-~---~~~~-~~~~~~~~~T~~~~~~~~aaa~aal  368 (472)
T 1ohv_A          298 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKM-MTG---GFFH-K---EEFR-PNAPYRIFNTWLGDPSKNLLLAEVI  368 (472)
T ss_dssp             ECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGG-SSE---EEEE-C---GGGS-CSSSSSSCCSSSSCHHHHHHHHHHH
T ss_pred             eCcccCCCCCCCchhccccCCCCCCCEEEEcccc-ccC---CccC-c---hhhc-ccccccccCccCccHHHHHHHHHHH
Confidence            9999876554432111111211  2244889994 235   7776 4   3432 1222333456778899999888888


Q ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHhccC----CC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC
Q 015768          281 QTGPEWVTERVKDLVRNREIIREALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG  355 (400)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~  355 (400)
                      +...+  ..+.++++++++++++.|+++    +. +....+. +.++++.++.. .+..+++.+|+ ++||.+.|+.   
T Consensus       369 ~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~-~~Gv~~~~~g---  440 (472)
T 1ohv_A          369 NIIKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDE-SIRNKLISIAR-NKGVMLGGCG---  440 (472)
T ss_dssp             HHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSH-HHHHHHHHHHH-HTTEECEEET---
T ss_pred             HHHHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEEeCCh-hHHHHHHHHHH-HCCeEEecCC---
Confidence            64211  245567777777787777654    31 2224454 56667777532 13567888887 6899998852   


Q ss_pred             CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          356 CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 ~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                       .+++||+++. ++++++++++++|++++++
T Consensus       441 -~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  470 (472)
T 1ohv_A          441 -DKSIRFRPTLVFRDHHAHLFLNIFSDILAD  470 (472)
T ss_dssp             -TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence             5799998886 8999999999999999875

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.95  E-value=1e-25  Score=212.31  Aligned_cols=307  Identities=15%  Similarity=0.125  Sum_probs=218.2

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-------cCCCCEE
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-------CDAGDSV  116 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-------~~~gd~v  116 (400)
                      .++++++++.+.+.+.   .|.+..+..++++++++++    |.+  ++++++++|+|++.++.++       .++||+|
T Consensus        13 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~V   83 (390)
T 3b8x_A           13 WDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTF----GSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEI   83 (390)
T ss_dssp             CCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEE
T ss_pred             CCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHH----CCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEE
Confidence            5689999998888653   3545666788888888887    543  6788888889999999999       7899999


Q ss_pred             EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768          117 VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (400)
Q Consensus       117 lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~  196 (400)
                      +++.++|+++...++..|++++.+ +.+++++.+|++++++.+++++  ++|++++   ++|...+   +++|.++|++|
T Consensus        84 i~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~---~~g~~~~---~~~i~~l~~~~  154 (390)
T 3b8x_A           84 IVPAVSWSTTYYPLQQYGLRVKFV-DIDINTLNIDIESLKEAVTDST--KAILTVN---LLGNPNN---FDEINKIIGGR  154 (390)
T ss_dssp             EEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHCCTTE--EEEEEEC---GGGCCCC---HHHHHHHHTTS
T ss_pred             EECCCCcHHHHHHHHHcCCEEEEE-ecCccccCcCHHHHHHHhCcCC--eEEEEEC---CccChhh---HHHHHHHHHHc
Confidence            999999999999999999999999 8887656889999999998654  8888874   5677777   99999999999


Q ss_pred             CCEEEEcccccccccCCCCccccCCCcEEEEec--cccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------
Q 015768          197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS--FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----------  264 (400)
Q Consensus       197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s--~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~----------  264 (400)
                      |+++|+|++|+.+.........  ...++...|  .+|.++ +| +.|+++.++  +++.+++.......          
T Consensus       155 ~~~li~D~a~~~g~~~~~~~~g--~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~--~~l~~~~~~~~~~g~~~~~~~~~~  228 (390)
T 3b8x_A          155 DIILLEDNCESMGATFNNKCAG--TFGLMGTFSSFYSNHIA-TM-EGGCIVTDD--EEIYHILLCIRAHGWTRNLPKKNK  228 (390)
T ss_dssp             CCEEEEECTTCTTCEETTEETT--SSSSEEEEECCTTSSSC-SS-SCEEEEESC--HHHHHHHHHHTBTTBSTTSCSEET
T ss_pred             CCEEEEECcCcccCEECCcccc--cccceEEEEccCCCCCc-cC-CceEEEeCC--HHHHHHHHHHHhcCCCcccccccc
Confidence            9999999999854321111111  111233322  355553 33 349998874  46666665433211          


Q ss_pred             ---------------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC--CCc-e
Q 015768          265 ---------------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGA-I  320 (400)
Q Consensus       265 ---------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~-~  320 (400)
                                           ++..+.+...++...+    +++++..++.+++++++.+.|++++++.+..+  ... .
T Consensus       229 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  304 (390)
T 3b8x_A          229 VTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL----KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWF  304 (390)
T ss_dssp             TTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCC
T ss_pred             ccccccccccccccceeccccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccE
Confidence                                 1114455555544444    44677888888999999999998865454432  222 2


Q ss_pred             EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeC---CCccCC-C---------------------CeEEEEecc-CCHHHHH
Q 015768          321 YLWARLPEK-HLDDFEVVRWLAHRHGVVVIP---GGACGC-R---------------------GHLRISFGG-LVEDDCK  373 (400)
Q Consensus       321 ~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~---g~~~~~-~---------------------~~iRi~~~~-~~~~~~~  373 (400)
                      .+++.++.. ..+.+++...|. ++||.+.+   |..|.. +                     +.+||+++. +|++|++
T Consensus       305 ~~~i~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~  383 (390)
T 3b8x_A          305 GFSFIIKKDSGVIRKQLVENLN-SAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEID  383 (390)
T ss_dssp             EEEEEECTTSCCCHHHHHHHHH-HTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHH
T ss_pred             EEEEEecCcCcccHHHHHHHHH-HCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHH
Confidence            355566531 235778888775 78999986   332211 0                     259999988 9999999


Q ss_pred             HHHHHH
Q 015768          374 AAADRL  379 (400)
Q Consensus       374 ~~~~~l  379 (400)
                      .+++.|
T Consensus       384 ~i~~~l  389 (390)
T 3b8x_A          384 YLREVL  389 (390)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            988876

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.95  E-value=4.7e-26  Score=222.04  Aligned_cols=331  Identities=13%  Similarity=0.102  Sum_probs=230.5

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC-
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-------D-AGD-  114 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~-------~-~gd-  114 (400)
                      .|+.++..+.....++....|...++..++++++.+++++.+|.+++++++|+|+|+|+..++.++.       + +|+ 
T Consensus       120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~  199 (515)
T 2jis_A          120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLR  199 (515)
T ss_dssp             CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGG
T ss_pred             CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCcc
Confidence            3455554444433344344565566677888999999999999888899999999999999988874       2 576 


Q ss_pred             -----EEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCC
Q 015768          115 -----SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       115 -----~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~  182 (400)
                           +|+++.++|+++...++..|.   +++.+ |.+++ +.+|+++|++.+++    +..+++|++++++|++|.+.|
T Consensus       200 ~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~~-~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~  277 (515)
T 2jis_A          200 TLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVV-KADER-GKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP  277 (515)
T ss_dssp             GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred             ccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEE-ecCCC-CcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC
Confidence                 899999999999999998887   88888 88754 57899999999974    222589999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccC-CCcEEEEeccccccCCCcceeEEEEccCCcH-HHHHHH-
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQL-  257 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~-~~~~~l-  257 (400)
                         +++|.++|++||+++|+|++|+.+......+.  ... .+.++++.|+||+++ .+.++|+++.++  + ++.++. 
T Consensus       278 ---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~--~~~~~~~~~  351 (515)
T 2jis_A          278 ---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLA-AGLQCSALLLQD--TSNLLKRCH  351 (515)
T ss_dssp             ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTC-CCSCCEEEEESC--CSCHHHHHH
T ss_pred             ---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccC-CCCCeeEEEEeC--hHHHHHHHh
Confidence               89999999999999999999998776433221  111 245688999999987 346789999885  3 244431 


Q ss_pred             ---HHhh-c----------cCCc------CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-C
Q 015768          258 ---LKVQ-D----------NIPI------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G  316 (400)
Q Consensus       258 ---~~~~-~----------~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~  316 (400)
                         ..+. .          ..+.      ....+.++++..++.  .+.++++.++..++++++.+.|++++++++.. +
T Consensus       352 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~  429 (515)
T 2jis_A          352 GSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG--DQGLERRIDQAFVLARYLVEEMKKREGFELVMEP  429 (515)
T ss_dssp             CC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCC
T ss_pred             cCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence               1111 0          0000      112455555555554  35577888899999999999999986656654 3


Q ss_pred             CCceEEEeeCCCC------CCCH--------HHHHHHHHHhcCeEEeCCCc-cCCCCeEEEEe-cc-CCHHHHHHHHHHH
Q 015768          317 EGAIYLWARLPEK------HLDD--------FEVVRWLAHRHGVVVIPGGA-CGCRGHLRISF-GG-LVEDDCKAAADRL  379 (400)
Q Consensus       317 ~~~~~~~~~~~~~------~~~~--------~~~~~~l~~~~gi~v~~g~~-~~~~~~iRi~~-~~-~~~~~~~~~~~~l  379 (400)
                      ..+.+.+...+..      ..+.        ..+...+. +.|+.+..... .+..+++|+++ +. ++++|++.+++.|
T Consensus       430 ~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l  508 (515)
T 2jis_A          430 EFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV-KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNEL  508 (515)
T ss_dssp             SSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHH
Confidence            3344443333321      0111        12455555 66765432111 12346899999 45 7999999999999


Q ss_pred             HHHHHH
Q 015768          380 RRGLEE  385 (400)
Q Consensus       380 ~~~l~~  385 (400)
                      ++++++
T Consensus       509 ~~~~~~  514 (515)
T 2jis_A          509 ERLGQD  514 (515)
T ss_dssp             HHHHTT
T ss_pred             HHHHhh
Confidence            887654

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.91  E-value=9.4e-30  Score=242.33  Aligned_cols=331  Identities=13%  Similarity=0.066  Sum_probs=228.6

Q ss_pred             hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.+|||..+..  .++ .+|+|++++.+.+.+.....| +.....++.+.+++    ..+ ..+.+++++|+++|+.
T Consensus        97 ~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~----~~p-~~~~v~~~nSGseA~~  170 (465)
T 2yky_A           97 VDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCD----RFP-SIDLVRFTNSGTEANL  170 (465)
Confidence            56789999988874  344 589999999998877433333 23333444444444    443 3578999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHH----hcCc--EEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCC
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ----MTGV--THILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPG  174 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~  174 (400)
                      .+++.+.  ..+++|++.+++|++......    ..|+  .++.+ |.      .|++.+++.++.. ..+++|+++..+
T Consensus       171 ~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~-~~------~d~~~l~~~l~~~~~~~aavi~epv~  243 (465)
T 2yky_A          171 MALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG-VY------NDVEGTADLLKRHGHDCAAILVEPML  243 (465)
Confidence            9998864  345899999999988665433    1233  22333 21      2788899888731 235788777556


Q ss_pred             CCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768          175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  253 (400)
Q Consensus       175 nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~  253 (400)
                      +++|.+ .+.+++++|.++|++||+++|+||+|. +..+ ........+....+.|+||++| +|+|+||++++   +++
T Consensus       244 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~---~~i  317 (465)
T 2yky_A          244 GAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-GGGAQEMLGISADLTTLGKYIG-GGMSFGAFGGR---RDL  317 (465)
Confidence            669964 568899999999999999999999999 6432 2111111222334568999998 59999999999   678


Q ss_pred             HHHHHH-----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceEEEe
Q 015768          254 ATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIYLWA  324 (400)
Q Consensus       254 ~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~  324 (400)
                      ++.+..     .....+++.|++++.++.++|+...+  +...+++.++.+++++.|+++    +....... .|.++++
T Consensus       318 ~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g-~G~~~~i  394 (465)
T 2yky_A          318 MERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLNRIAVENQAPLQFTG-LGSLGTI  394 (465)
Confidence            877765     23446788899999999888875322  345666777777777777664    22122333 3777887


Q ss_pred             eCCC-CC-----------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          325 RLPE-KH-----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       325 ~~~~-~~-----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .++. ..           ....+++..++ ++||++.|+.. .  .   +++. .+++++++++++|.++++++.
T Consensus       395 ~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~-~--~---~s~~-~t~edid~~l~~l~~~l~~~~  461 (465)
T 2yky_A          395 HFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGM-Y--A---LSLE-IADAGRDAFAEALADFIGEQR  461 (465)
Confidence            7753 10           01346777776 79999998762 1  1   5655 589999999999999998763

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.94  E-value=8.8e-26  Score=215.91  Aligned_cols=320  Identities=17%  Similarity=0.133  Sum_probs=211.0

Q ss_pred             EcCCCCCCCCCcHHHHHHHH---HhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768           34 SLAQGVVYWQPPKMAMEKVK---ELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (400)
Q Consensus        34 ~~~~~~~~~~~~~~v~~a~~---~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~  108 (400)
                      .++.|.++...|+.+ +++.   .....  ...|.  ...|..++.+++.+++++.+|++++++++++|+|.+.+.++.+
T Consensus        68 ~~~~g~~~~~~p~~v-~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a  144 (438)
T 1wyu_A           68 FLGGGVRSHHVPPVV-QALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLA  144 (438)
T ss_dssp             CCCSSCCCCCCCHHH-HHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHH
T ss_pred             ccCCCccCCcCcHHH-HHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHH
Confidence            445555555556555 4443   22222  22332  1345567777888888888898888889999999555554444


Q ss_pred             h-cCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015768          109 L-CDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (400)
Q Consensus       109 l-~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~  183 (400)
                      + .++||+|+++.++|+++...++    ..|++++.+ +. ++ +.+|+++    +++++  ++|++++| ||+|.+.+ 
T Consensus       145 ~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v-~~-~~-~~~d~~~----i~~~t--~~v~i~~p-n~tG~~~~-  213 (438)
T 1wyu_A          145 LRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL-PL-EG-GRTPLPE----VGEEV--GAVVVQNP-NFLGALED-  213 (438)
T ss_dssp             HHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE-CC-BT-TBCCCCC----CCTTE--EEEEEESS-CTTSBCCC-
T ss_pred             HhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE-cC-cC-CccCHHH----hCCCe--EEEEEECC-CCCeEEec-
Confidence            3 4789999999999998886654    489999999 76 33 3567665    55544  99999999 99999998 


Q ss_pred             HHHHHHHHHHHHcCCEEEEccc-ccccccCCCCccccCCCcEEEEeccccccC----CCcceeEEEEccCCcHHHHHHHH
Q 015768          184 RLLKRISDLCKAAGSWLVVDNT-YEYFMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLL  258 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~G~i~~~~~~~~~~~~l~  258 (400)
                        +++|.++|+++|+++|+|.. .+.... ..+   ...+.+++++| +|.||    +.|.++||++.+   +++.+.+.
T Consensus       214 --l~~i~~la~~~g~~vivd~d~~a~g~~-~~~---~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~---~~~~~~l~  283 (438)
T 1wyu_A          214 --LGPFAEAAHGAGALFVAVADPLSLGVL-KPP---GAYGADIAVGD-GQSLGLPMGFGGPHFGFLATK---KAFVRQLP  283 (438)
T ss_dssp             --HHHHHHHHHHTTCEEEEECCTTGGGTB-CCH---HHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEEC---GGGGGGCC
T ss_pred             --HHHHHHHHHHcCCEEEEEechhhccCc-CCC---ccCCCCEEEEC-CcccCCCccCCCCCeeEEEEc---HHHHHhCC
Confidence              99999999999999996633 221111 111   12244577777 55443    345689999988   45544431


Q ss_pred             Hh-------------------------h-ccCCcCc---cHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768          259 KV-------------------------Q-DNIPICA---SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       259 ~~-------------------------~-~~~~~~~---~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      ..                         + ...+.+.   +.....++..++.. +.+.++++.+++.++++++.+.|+++
T Consensus       284 ~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~  363 (438)
T 1wyu_A          284 GRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEV  363 (438)
T ss_dssp             SCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             CceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            10                         0 0112221   22222222222321 23446778888999999999999998


Q ss_pred             CCCcccCCCCceE--EEeeCCCCCCCHHHHHHHHHHhcCeEE--eCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          309 GEGAVKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVV--IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       309 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~gi~v--~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +++++..+. ..+  +.++++   .+..++..+|. ++||.+  .++..|. ++++|++++. ++++|+++++++|++++
T Consensus       364 ~g~~~~~~~-~~~~~~~~~~~---~~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          364 PGVRPFTPK-PFFNEFALALP---KDPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             TTCEECSCS-SBCSEEEEECS---SCHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             CCeEECCCC-CeEEEEEEeCC---CCHHHHHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence            665666553 222  334443   25788998887 679999  6666553 7899999986 79999999999998764

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.94  E-value=1.6e-26  Score=221.03  Aligned_cols=287  Identities=9%  Similarity=0.039  Sum_probs=195.1

Q ss_pred             HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC--CCC-C--
Q 015768           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK-T--  147 (400)
Q Consensus        73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~--~~~-~--  147 (400)
                      ..+++.+++++ +|.+ +++++++|+|+++..++.++.++||+|+++.++|.++...+...|++++++ +.  +++ +  
T Consensus        58 ~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~~  134 (446)
T 2x3l_A           58 VILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFI-ETHQSPLTNHY  134 (446)
T ss_dssp             HHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEEC-EEEECTTTSSE
T ss_pred             HHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEE-eCeeccccCcC
Confidence            34556666666 6766 789999999999999999999999999999999999999999999999888 66  432 1  


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~  226 (400)
                      +.+|++.+   +.++  +++|++++ .|++|.+.+   +++|.++|++||+++|+|++|+. +.+.+.+......+.+++
T Consensus       135 ~~~d~~~l---~~~~--~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~  205 (446)
T 2x3l_A          135 NKVNLSRL---NNDG--HKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYV  205 (446)
T ss_dssp             EEEEC------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEE
T ss_pred             CCCCHHHH---cCCC--ceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEE
Confidence            34677776   3344  49999998 566999999   88999999999999999999986 323332222222345699


Q ss_pred             EeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREA  304 (400)
Q Consensus       227 ~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~  304 (400)
                      +.|+||+++ ++.++||++.+++.-+ ...+.... ...+.+++.....++..+++....+ ..+..++..++++.+++.
T Consensus       206 ~~S~~K~l~-~~~g~g~l~~~~~~i~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~  283 (446)
T 2x3l_A          206 VQSFHKTLP-ALTMGSVLYIHKNAPY-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK  283 (446)
T ss_dssp             EECHHHHSS-SCTTCEEEEEETTCTT-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred             EECCccccc-cccccEEEEEcCCcCC-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc
Confidence            999999764 4456899988753212 22333211 1123344544444433333210110 122455556666666665


Q ss_pred             hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe-CCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                           ++.+..+....++|+.++  ..+..++..+|. ++||.+. +|     .+++|++++. ++++++ .++++|+++
T Consensus       284 -----g~~~~~~~~~~~l~i~~~--~~~~~~l~~~L~-~~GI~v~~~g-----~~~iRi~~~~~~t~e~i-~l~~aL~~~  349 (446)
T 2x3l_A          284 -----GFEMLQVDDPLKLLIKYE--GFTGHDIQNWFM-NAHIYLELAD-----DYQALAILPLWHHDDTY-LFDSLLRKI  349 (446)
T ss_dssp             -----TCEEEECSSTTEEEEECT--TSCHHHHHHHHH-HTTEEESEEC-----SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred             -----CCEECcCCCCeEEEEEeC--CcCHHHHHHHHH-HCCCEEEecC-----CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence                 334544443557888887  246788888886 5699997 43     4789999987 688999 999999998


Q ss_pred             HHHHh
Q 015768          383 LEELV  387 (400)
Q Consensus       383 l~~~~  387 (400)
                      ++.+.
T Consensus       350 ~~~~~  354 (446)
T 2x3l_A          350 EDMIL  354 (446)
T ss_dssp             HTCCC
T ss_pred             HHhhc
Confidence            87653

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.94  E-value=2.5e-25  Score=211.43  Aligned_cols=284  Identities=17%  Similarity=0.113  Sum_probs=190.9

Q ss_pred             HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCC
Q 015768           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSK  146 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~  146 (400)
                      .++++.+++++    |.+  ..++++++++|++.++.++.++||+|+++.++|++....+    +..|++++.+ + +.+
T Consensus        61 ~~l~~~la~~~----g~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~  132 (421)
T 2ctz_A           61 DVLEKRLAALE----GGK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFT-S-REE  132 (421)
T ss_dssp             HHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEEC-C-TTC
T ss_pred             HHHHHHHHHHh----CCC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-C-CCC
Confidence            55666666655    543  4456666799999999999999999999999999887765    7789988766 3 221


Q ss_pred             CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccc-cccccCCCCccccCCCcEE
Q 015768          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~~~i  225 (400)
                          |++++++.+++++  ++|++++++||+|.+.|   +++|.++|++||+++|+|++| +.. +.+.+.   ..+.++
T Consensus       133 ----d~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~~~---~~~~Di  199 (421)
T 2ctz_A          133 ----RPEEFLALTDEKT--RAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLRPL---AWGAAL  199 (421)
T ss_dssp             ----CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCCGG---GGTCSE
T ss_pred             ----CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCCcc---ccCCeE
Confidence                7899999998755  99999999999999999   999999999999999999999 533 222221   234679


Q ss_pred             EEeccccccCCCcceeEEEEccCCcHHH----HHHHHHh--------------------------hccCCcCccHHHHHH
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYPSEVEGF----ATQLLKV--------------------------QDNIPICASIISQHL  275 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~----~~~l~~~--------------------------~~~~~~~~~~~~~~~  275 (400)
                      ++.|+||+++.+|.++|+++..++.+++    .+.+...                          ........++...++
T Consensus       200 ~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~  279 (421)
T 2ctz_A          200 VTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWV  279 (421)
T ss_dssp             EEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHH
T ss_pred             EEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence            9999999998788888887664210111    1112110                          011122445555555


Q ss_pred             HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-C-----------------CCceEEEeeCCCCCCCHHHHH
Q 015768          276 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G-----------------EGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       276 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      +...++.    +..+.+++.++.+++.+.|++++.+..+. |                 ..+.++.+.+.....+...+.
T Consensus       280 ~~~~l~~----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~  355 (421)
T 2ctz_A          280 VLLGMET----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFI  355 (421)
T ss_dssp             HHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHH
T ss_pred             HHcCcch----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHH
Confidence            5555554    45566677788999999999887644321 1                 124566667753110122233


Q ss_pred             HHHHHhcCeEEeCCCccC-----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ..+ +..++.+..|..+.                       .++.+|+|++.   ++++++++.|++++
T Consensus       356 ~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~---e~~~~li~~l~~al  420 (421)
T 2ctz_A          356 SRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL---EHVEDLKAELKEAL  420 (421)
T ss_dssp             HTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHT
T ss_pred             HhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHh
Confidence            322 12344555552211                       14789999986   67788888888875

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.93  E-value=3.9e-25  Score=208.49  Aligned_cols=272  Identities=16%  Similarity=0.082  Sum_probs=187.2

Q ss_pred             HHHHHHHHHhhcCC----CCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEE
Q 015768           46 KMAMEKVKELVWDP----SISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVV  117 (400)
Q Consensus        46 ~~v~~a~~~~~~~~----~~~~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~---~~g~t~a~~~~~~~l~~~gd~vl  117 (400)
                      ++|++++.+.....    ...+|+. ..+.+.+++.+++++    |.+  ..++   ++|+++|+..++.++++|||+|+
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~----g~e--~alv~p~~~sGt~A~~~al~all~pGD~Vl  120 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIF----NTE--SAFVRPHFVNGTHAIGAALFGNLRPNDTMM  120 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHH----TCS--EEEEETTCCSHHHHHHHHHHHTCCTTCEEE
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHh----CCC--ceEEeCCCCcHHHHHHHHHHHhcCCCCEEE
Confidence            78888888764321    1222322 224445555555544    643  3455   78899999999999999999999


Q ss_pred             EeC-CCccchh-----------HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC----CCCCCccCC
Q 015768          118 MFA-PYYFNSY-----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYI  181 (400)
Q Consensus       118 v~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~----p~nptG~~~  181 (400)
                      +.+ |.|.++.           ..++..|++++.+ +. + ++.+|++++++.++....+|+|++++    |+||+|.+.
T Consensus       121 ~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~-~-~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~  197 (427)
T 3hvy_A          121 SICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMV-DL-K-DGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIA  197 (427)
T ss_dssp             ECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEEC-CC-B-TTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHH
T ss_pred             EeCCCCchhHHHHhccccchhhhHHHHcCCEEEEe-cC-C-CCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHH
Confidence            998 9998876           3456679999988 77 3 34689999999998312249999998    999998776


Q ss_pred             CHHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHH
Q 015768          182 PERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLL  258 (400)
Q Consensus       182 ~~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~  258 (400)
                      +   +++|+++|++  ||+++++|++|+.+.+...+   ...+.+++++|+||++|.+| .+.||++++   +++++++.
T Consensus       198 d---l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~---~~li~~l~  268 (427)
T 3hvy_A          198 E---IAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---TDVGADIIAGSLIKNIGGGIATTGGYIAGK---EEYVTQAT  268 (427)
T ss_dssp             H---HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---GGGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHHH
T ss_pred             H---HHHHHHHHHHhCCCCEEEEECCccccccCCCC---cccCCeEEEECCcccccccccceEEEEEEC---HHHHHHHH
Confidence            6   9999999999  89999999999876643222   23356799999999997433 567999998   88999887


Q ss_pred             HhhccCCc----CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCC
Q 015768          259 KVQDNIPI----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKH  330 (400)
Q Consensus       259 ~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~  330 (400)
                      ........    +++......+...+.    ....+.++..+++.++++.|++++. .+.+..    ....+.+.+... 
T Consensus       269 ~~~~~~~~g~~~~~~~~~a~~~~~gl~----~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~~-  342 (427)
T 3hvy_A          269 FRVTVPGIGGECGSTFGVMRSLYEGLF----MAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFNDE-  342 (427)
T ss_dssp             HHHSCTTTGGGCCCCTTCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSSH-
T ss_pred             HHhhcCCcccccCCCHHHHHHHHHhHh----HHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCCH-
Confidence            74322121    121111333333333    3567888899999999999999887 543322    122666677521 


Q ss_pred             CCHHHHHHHHH
Q 015768          331 LDDFEVVRWLA  341 (400)
Q Consensus       331 ~~~~~~~~~l~  341 (400)
                      ....++++.|.
T Consensus       343 ~~~~~f~~~l~  353 (427)
T 3hvy_A          343 KKLIDFIKGIQ  353 (427)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            12445666554

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.93  E-value=1.9e-24  Score=200.14  Aligned_cols=324  Identities=13%  Similarity=0.072  Sum_probs=220.9

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCC---CCC---CCCCCcHHHHHHHHHHHHhhcCCCC-CcEEE-eCChHHHHHHHHHHhcC
Q 015768           40 VYWQPPKMAMEKVKELVWDPSI---SKY---GADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLTLCD  111 (400)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~---~~y---~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~-~~g~t~a~~~~~~~l~~  111 (400)
                      ...+.|++|++++.+.+.+...   ..+   .......++.+...+.+++.+|+++ ++|+| ++|+|++++.++..+..
T Consensus        20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~   99 (377)
T 3e77_A           20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIG   99 (377)
T ss_dssp             CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGG
T ss_pred             ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccC
Confidence            3456899999999998864211   111   1112234455566666666678864 67888 48999999999999986


Q ss_pred             C--CCEEEEeCCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          112 A--GDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       112 ~--gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      +  ||+|++..-++++.  ...++..|..++.+ +.+.+ ...+++.++..+++++  ++|.+++.+|.||.+.|   + 
T Consensus       100 ~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~-~~~~~-~~~~~~~~~~~i~~~t--~lV~~~h~et~tG~~~p---i-  171 (377)
T 3e77_A          100 LKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH-PKLGS-YTKIPDPSTWNLNPDA--SYVYYCANETVHGVEFD---F-  171 (377)
T ss_dssp             GSTTCEEEECCCSHHHHHHHHHHTTTSEEEECS-CCCSS-SCSCCCGGGCCCCTTC--SCEEEESEETTTTEECS---S-
T ss_pred             CCCCCeEEEEECCHHHHHHHHHHHHhCCceEEe-ccCCC-cCCCCChHHhccCCCc--cEEEEeCccCchheEch---h-
Confidence            5  89998877766553  34566778887777 66533 3456667766666665  89999988899999999   4 


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc--------HHHHH-HHH
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFAT-QLL  258 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~--------~~~~~-~l~  258 (400)
                          +|+++|+++++|.+++.+   ..+......+  +++.|.+|++|.+|  +|+++.+++.        +.+.+ ...
T Consensus       172 ----i~~~~~~~~~vD~~q~~g---~~~id~~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~  240 (377)
T 3e77_A          172 ----IPDVKGAVLVCDMSSNFL---SKPVDVSKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQ  240 (377)
T ss_dssp             ----CCCCTTCCEEEECTTTTT---SSCCCGGGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHH
T ss_pred             ----hhccCCCEEEEEcccccC---CCCCchhhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHH
Confidence                366889999999999843   3344333344  57789999998667  5777666421        11111 001


Q ss_pred             HhhccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCcccC----CCCceEEEeeCCCCCCC
Q 015768          259 KVQDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG----GEGAIYLWARLPEKHLD  332 (400)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~~~~~~~~~~~~~~~  332 (400)
                      ........+++....+++..+++.-. . .++++.++.+++.+++++.|++++++.+..    ..++..+.+.++....+
T Consensus       241 ~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~  320 (377)
T 3e77_A          241 AGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD  320 (377)
T ss_dssp             HTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCC
T ss_pred             hhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCc
Confidence            11122345778888888777776422 2 467888899999999999999986544322    12344566777642111


Q ss_pred             H---HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          333 D---FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       333 ~---~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .   ..+...+. ++||.+.+|..  ..+.+|+|+.. +|++|++.+++.|++++++
T Consensus       321 ~~~~~~~l~~l~-~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~  374 (377)
T 3e77_A          321 DALEKRFLDKAL-ELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEM  374 (377)
T ss_dssp             HHHHHHHHHHHH-HTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHH-HCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            1   34556554 78999988753  35679999988 8999999999999998865

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.93  E-value=2.4e-24  Score=202.42  Aligned_cols=271  Identities=16%  Similarity=0.110  Sum_probs=190.1

Q ss_pred             HHHHHHHHHhhcC----CCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEE
Q 015768           46 KMAMEKVKELVWD----PSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVV  117 (400)
Q Consensus        46 ~~v~~a~~~~~~~----~~~~~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~---~~g~t~a~~~~~~~l~~~gd~vl  117 (400)
                      .+|++++.+....    +....|.. ..+...+++.+++++    |.  +..++   ++|+++|+..++.++++|||+|+
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~----g~--e~alv~p~~~sGt~Ai~~al~all~~GD~Vl  105 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVF----KT--EAALVRPQIISGTHAISTVLFGILRPDDELL  105 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHH----TC--SEEEEETTSCSHHHHHHHHHHHHCCTTCEEE
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHh----CC--CcEEEECCCccHHHHHHHHHHHhcCCCCEEE
Confidence            6788888876422    11222222 233455555555554    64  33444   88999999999999999999999


Q ss_pred             EeC-CCccchhH----------HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC----CCCCCccCCC
Q 015768          118 MFA-PYYFNSYM----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYIP  182 (400)
Q Consensus       118 v~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~----p~nptG~~~~  182 (400)
                      ++. +.|.++..          .++..|++++.+ +.+++ +.+|++++++.+++++  ++|++++    |+||+|.+.+
T Consensus       106 ~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v-~~~~~-g~~d~e~l~~ai~~~t--klV~i~~s~g~p~nptg~v~~  181 (409)
T 3jzl_A          106 YITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV-PLLEN-GDVDFPRIAKKMTPKT--KMIGIQRSRGYADRPSFTIEK  181 (409)
T ss_dssp             ECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC-CCCTT-SCCCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCHHH
T ss_pred             EeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe-CCCCC-CCcCHHHHHHhccCCC--eEEEEECCCCCCCCCcCcccc
Confidence            998 99988874          346679999999 88765 4689999999998765  9999999    9999998876


Q ss_pred             HHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH
Q 015768          183 ERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       183 ~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~  259 (400)
                         +++|.++|++  ||+++++|++|+.+.+...+   ...+.+++++|+||++|.+| ...||++++   +++++++..
T Consensus       182 ---l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~~~g~Div~~S~sK~lgg~~~~~GG~v~~~---~~li~~l~~  252 (409)
T 3jzl_A          182 ---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---PEVGADIIAGSLIKNPGGGLAKTGGYIAGK---EALVDLCGY  252 (409)
T ss_dssp             ---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---GGGTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHHHH
T ss_pred             ---HHHHHHHHHhhCCCCEEEEeCCcccccccCCc---cccCCeEEEECccccCCccCCceEEEEEeC---HHHHHHHHH
Confidence               9999999999  99999999999876543222   23356799999999997444 446999998   889888876


Q ss_pred             hhccC----CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCCC
Q 015768          260 VQDNI----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHL  331 (400)
Q Consensus       260 ~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~~  331 (400)
                      .....    ..++......++...+.    ....+++++.+++.++++.|++++. .+.+..    ....+.+.+... .
T Consensus       253 ~~~~~~~g~~~g~~~~~~~~~l~gl~----~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~~-~  326 (409)
T 3jzl_A          253 RLTTPGIGREAGASLYSLLEMYQGFF----LAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHNK-E  326 (409)
T ss_dssp             HHSCTTTGGGCCCCTTCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSCH-H
T ss_pred             HhccccccccccccHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCCH-H
Confidence            43221    12222211233333443    3567788899999999999999887 443221    122555666532 2


Q ss_pred             CHHHHHHHHH
Q 015768          332 DDFEVVRWLA  341 (400)
Q Consensus       332 ~~~~~~~~l~  341 (400)
                      ...++++.|.
T Consensus       327 ~~~~~~~~L~  336 (409)
T 3jzl_A          327 KMVAFAQAIQ  336 (409)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            3456777664

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.93  E-value=2.4e-24  Score=203.09  Aligned_cols=274  Identities=15%  Similarity=0.079  Sum_probs=189.1

Q ss_pred             HHHHHHHHHhhcC----CCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEE--eCChHHHHHHHHHHhcCCCCEEEE
Q 015768           46 KMAMEKVKELVWD----PSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMV--TAGANQAFVNIVLTLCDAGDSVVM  118 (400)
Q Consensus        46 ~~v~~a~~~~~~~----~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~--~~g~t~a~~~~~~~l~~~gd~vlv  118 (400)
                      ++|++++.+....    +....|+ +..+...+++.++++    +|.+. .+++  ++|+++|+..++.++++|||+|++
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l----~g~e~-alv~p~~~sGt~Ai~~al~all~pGD~Vl~  120 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARV----FNTES-ALVRPHFVNGTHALGAALFGNLRPGNTMLS  120 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHH----HTCSE-EEEETTCCSHHHHHHHHHHHHCCTTCEEEE
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHH----hCCcc-eEEeCCCccHHHHHHHHHHHHhCCCCEEEE
Confidence            6788888765321    1122232 223344455555554    46543 2443  888999999999999999999999


Q ss_pred             eC-CCccchhH-----------HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC----CCCCCccCCC
Q 015768          119 FA-PYYFNSYM-----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYIP  182 (400)
Q Consensus       119 ~~-p~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~----p~nptG~~~~  182 (400)
                      +. |.|.++..           .++..|++++.+ +.++++ .+|++++++.++....+|+|++++    |+||+|.+.+
T Consensus       121 ~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~~~~g-~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~d  198 (427)
T 3i16_A          121 VCGEPYDTLHDVIGITENSNMGSLKEFGINYKQV-DLKEDG-KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIED  198 (427)
T ss_dssp             SSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEEC-CCCTTS-SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHH
T ss_pred             eCCCccHHHHHHHhccccchHHHHHHcCCEEEEe-cCccCC-CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHH
Confidence            98 99988773           346679999999 887665 679999999998312249999998    9999988766


Q ss_pred             HHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH
Q 015768          183 ERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK  259 (400)
Q Consensus       183 ~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~  259 (400)
                         +++|+++|++  +|+++++|++|+.+.+...+   ...+.+++++|+||.+|.+| .+.||++++   +++++++..
T Consensus       199 ---l~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~---~~li~~l~~  269 (427)
T 3i16_A          199 ---IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---TDVGADLIAGSLIKNIGGGIAPTGGYLAGT---KDCIEKTSY  269 (427)
T ss_dssp             ---HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---GGGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHHHH
T ss_pred             ---HHHHHHHHHHhCCCCEEEEECCCccccccCCc---cccCCeEEEecCcccCCCCCCceEEEEEEC---HHHHHHHHH
Confidence               9999999999  99999999999876643222   22356799999999997444 567999998   889998877


Q ss_pred             hhccCCcC--ccH-HH-HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCCC
Q 015768          260 VQDNIPIC--ASI-IS-QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHL  331 (400)
Q Consensus       260 ~~~~~~~~--~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~~  331 (400)
                      .......+  ..+ +. ...+...+    .....+.+++.+++.++++.|++++. .+.+..    ...++.+.+... .
T Consensus       270 ~~~~~~~g~~~~~~~~~a~~~l~gl----~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~~i~~i~l~~~-~  343 (427)
T 3i16_A          270 RLTVPGIGGECGSTFGVVRSMYQGL----FLAPHISMEALKGAILCSRIMELAGF-EVMPKYDEKRSDIIQSIKFNDK-D  343 (427)
T ss_dssp             HHSCTTTGGGCCCCTTCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCEEEECSSH-H
T ss_pred             hcccCccCccCCccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCccEEEEEEECCH-H
Confidence            43222221  111 22 23333333    33577888999999999999999987 553322    122666666521 1


Q ss_pred             CHHHHHHHHH
Q 015768          332 DDFEVVRWLA  341 (400)
Q Consensus       332 ~~~~~~~~l~  341 (400)
                      ...++++.|.
T Consensus       344 ~~~~f~~~l~  353 (427)
T 3i16_A          344 KLIEFCKGIQ  353 (427)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            3456666664

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.93  E-value=5e-23  Score=205.62  Aligned_cols=302  Identities=11%  Similarity=0.015  Sum_probs=203.9

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-HHhcCcEEEEeccCCCCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCSSKTL  148 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~  148 (400)
                      ..++++.+++++    |.+ ..+++++|+++++..++.+++++||+|+++.++|.++... ++..|++++.+ +.+.+.+
T Consensus       175 i~e~e~~lA~~~----gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v-~~~~~~~  248 (730)
T 1c4k_A          175 AVAAEKHAARVY----NAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYL-QTNRNPY  248 (730)
T ss_dssp             HHHHHHHHHHHT----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEE-CEEECTT
T ss_pred             HHHHHHHHHHHH----CCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEE-eCCcccc
Confidence            345555555554    764 4477888888999999999999999999999999999888 88899999888 5543222


Q ss_pred             ----CCCHHHH-----HHhhccC------C-CC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-c
Q 015768          149 ----HPDADWL-----EKTLETK------P-TP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF-M  210 (400)
Q Consensus       149 ----~~~~e~l-----~~~l~~~------~-~~-~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~-~  210 (400)
                          .+|++++     ++.++++      + .+ +++++++| |++|.+.+   +++|+++|++||+++++|++|+.. .
T Consensus       249 ~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~~~~  324 (730)
T 1c4k_A          249 GFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQ  324 (730)
T ss_dssp             CCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred             CccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcccccccc
Confidence                3688888     8888754      2 23 89999998 58999999   899999999999999999999743 2


Q ss_pred             cCCC-----Cccc----cCCCcEEEEeccccccCCCccee-EEEEccCCc----HHH--HHHHHHhh-ccCCcCccHHHH
Q 015768          211 YDGR-----KHCC----VEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEV----EGF--ATQLLKVQ-DNIPICASIISQ  273 (400)
Q Consensus       211 ~~~~-----~~~~----~~~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~~----~~~--~~~l~~~~-~~~~~~~~~~~~  273 (400)
                      +++.     ....    .+.++++++.|+||+++  |.+. |+++.++..    +..  ..++.... ...+.+++....
T Consensus       325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~i  402 (730)
T 1c4k_A          325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMY  402 (730)
T ss_dssp             SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHH
T ss_pred             cCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHH
Confidence            3221     1111    11234589999999975  5443 566444310    000  12222211 122445565555


Q ss_pred             HHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCC----------------------------------
Q 015768          274 HLALYSLQTGPE-WVTERVKDLVRNREIIREALSP-LGEGAVKGGE----------------------------------  317 (400)
Q Consensus       274 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~----------------------------------  317 (400)
                      .++..++..... ...++.+++.++.+.+++.|++ ++++.+..+.                                  
T Consensus       403 aal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  482 (730)
T 1c4k_A          403 AALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYE  482 (730)
T ss_dssp             HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCT
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhcccc
Confidence            555545442111 3456667788888888888877 5554443321                                  


Q ss_pred             ---Cc-eE-----EEeeCCC----------CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768          318 ---GA-IY-----LWARLPE----------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD  377 (400)
Q Consensus       318 ---~~-~~-----~~~~~~~----------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~  377 (400)
                         .+ ++     +.+..+.          ...++..+..+|. ++||.+...    ....+|++++. +|+++++.+++
T Consensus       483 ~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~-e~GI~v~~~----~~~~ir~~~s~g~t~e~i~~Ll~  557 (730)
T 1c4k_A          483 GYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLR-DHGIIPEKS----DLNSILFLMTPAETPAKMNNLIT  557 (730)
T ss_dssp             TCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHH-HTTCCCSEE----CSSEEEEECCTTCCHHHHHHHHH
T ss_pred             ccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHH-HCCcEEEEC----CCCeEEEEeCCCCCHHHHHHHHH
Confidence               11 11     4555531          2346788888886 679988542    35789999887 89999999999


Q ss_pred             HHHHHHHHHhc
Q 015768          378 RLRRGLEELVK  388 (400)
Q Consensus       378 ~l~~~l~~~~~  388 (400)
                      .|+++.+.+.+
T Consensus       558 aL~~i~~~~~~  568 (730)
T 1c4k_A          558 QLLQLQRLIEE  568 (730)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHhccc
Confidence            99999887753

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.92  E-value=7.6e-25  Score=207.58  Aligned_cols=277  Identities=14%  Similarity=0.098  Sum_probs=194.2

Q ss_pred             cHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc--EEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768           45 PKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGDSVVM  118 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~--i~~~~g~t~a~~~~~~~l~~~gd~vlv  118 (400)
                      .++|++++.+.....    ...+|..+   +..++++++++++.+|.+...  ++++ ++|+|+..++.++++|||+|++
T Consensus        37 ~~~vl~A~~~~~~~~~~~~~~~g~~y~---~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~  112 (431)
T 3ht4_A           37 QFRVLESFGKHKISDSHFIPTTGYGYD---DIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLY  112 (431)
T ss_dssp             HHHHHHHHHHTTCCGGGSCCCCTTCCS---CHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEE
T ss_pred             HHHHHHHHHHhchhhhhcCCCCCCCCC---hhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEE
Confidence            367888887753221    11222211   234777777777777865332  2244 7789999999999999999999


Q ss_pred             eC-CCccchhHHH----------HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHH
Q 015768          119 FA-PYYFNSYMSF----------QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLL  186 (400)
Q Consensus       119 ~~-p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l  186 (400)
                      .. |.|.++...+          +..|++++.+ +.+++ +.+|++++++.+++++  ++|+++ +|+||+|...+.+++
T Consensus       113 ~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v-~~~~~-~~~d~e~l~~~l~~~t--k~V~i~~sp~np~~~~~~~~~l  188 (431)
T 3ht4_A          113 ITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV-PLTEG-GLVDFEAVAAAIHSNT--KMIGIQRSKGYATRPSFTISQI  188 (431)
T ss_dssp             CSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC-CBCTT-SSBCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCHHHH
T ss_pred             eCCCCchhHHHHHhhcccccchHHHcCCEEEEe-CCCCC-CCcCHHHHHhhcCCCC--eEEEEECCCCCCCCCcCCHHHH
Confidence            98 9998887554          4578999999 87765 4789999999998765  999999 589999999999999


Q ss_pred             HHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          187 KRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       187 ~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      ++|+++|++  +|+++|+|++|+.+.+...+.   ..+.+++++|+||++|. .+...||++++   +++++.+......
T Consensus       189 ~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~~GG~v~~~---~~li~~l~~~~~~  262 (431)
T 3ht4_A          189 KEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVKTGGYIVGK---EQYVEACAYRLTS  262 (431)
T ss_dssp             HHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHHHHHHSC
T ss_pred             HHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCCceEEEEec---HHHHHHHHHHhcc
Confidence            999999999  999999999999887543322   23467999999999752 12445999998   7888888764432


Q ss_pred             CCc----CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEeeCCCCCCCHHH
Q 015768          264 IPI----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       264 ~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  335 (400)
                      ...    +++.....++...+.    ....+.++..+++.++.+.|++++. .+.+.    ..+..+.+.++.. ....+
T Consensus       263 ~~~g~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~a~~l~~~L~~~g~-~v~p~~~~~~~~li~~i~l~~~-~~~~~  336 (431)
T 3ht4_A          263 PGIGAEAGASLYSLQEMYQGFF----LAPHVAGQALKGAIFTAAFLEKLGM-NTSPAWNAPRTDLIQSVQFDDK-DRMIA  336 (431)
T ss_dssp             TTTTTSCSCCCSCSHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTC-CEESCTTSCCSSSCCEEECCCH-HHHHH
T ss_pred             CCcccccCccHHHHHHHHhHhh----hHHHHHHHHHHHHHHHHHHHHhCcC-EecCCCCCCCccEEEEEEeCCH-HHHHH
Confidence            111    121111233333333    2467778888999999999998876 43322    2223556666532 13456


Q ss_pred             HHHHHH
Q 015768          336 VVRWLA  341 (400)
Q Consensus       336 ~~~~l~  341 (400)
                      +++.+.
T Consensus       337 ~~~~l~  342 (431)
T 3ht4_A          337 FCQAIQ  342 (431)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777665

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.92  E-value=2.6e-23  Score=196.62  Aligned_cols=330  Identities=13%  Similarity=0.103  Sum_probs=216.2

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.+|||..+.  +.++ .+|+|++++.+.+.+...... +.....    ++++.+.+... ..+.++|++++|+|++
T Consensus        84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~-~~~~~~----~lae~l~~~~p-~~~~v~f~~SGsEA~e  157 (454)
T 4ao9_A           84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTG-HNLLEG----RLARLICERFP-QIEQLRFTNSGTEANL  157 (454)
T ss_dssp             TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCS-EESSHH----HHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccC-CcHHHH----HHHHHHHHhCC-CCCEEEEeCchHHHHH
Confidence            5678899998775  4444 789999999999887432211 222233    44444444433 3588999999999999


Q ss_pred             HHHHHhcC--CCCEEEEeCCCccchhHHHHh------cCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCC
Q 015768          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQM------TGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPG  174 (400)
Q Consensus       104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~  174 (400)
                      .+++....  ..++|+....+|++.....-.      .......+ |.      -|++.+++.++. ...+.+|+++..+
T Consensus       158 ~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~-p~------nd~~~l~~~l~~~~~~iAavIvEPv~  230 (454)
T 4ao9_A          158 MALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVL-PY------NDAQTARAQIERHGPEIAVVLVEPMQ  230 (454)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEE-CT------TCHHHHHHHHHHTGGGEEEEEECSEE
T ss_pred             HHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccC-CC------chHHHHHHHHhhcCCceEEEEecccc
Confidence            99998752  347899999999885532211      11233333 32      178899988873 2335777777656


Q ss_pred             CCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCC---CccccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768          175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  250 (400)
Q Consensus       175 nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~  250 (400)
                      ...|.+ .+++++++|.++|++||+++|+||++.+ ..+..   ......+|  +  .+++|.+| .|+++|.++++   
T Consensus       231 g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G~~~a~e~~gv~PD--i--~t~gK~lg-gG~Piga~~~~---  301 (454)
T 4ao9_A          231 GASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLAPHGLANKLGIRSD--L--TTLGKYIG-GGMSFGAFGGR---  301 (454)
T ss_dssp             STTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGSTTCHHHHHTCCCS--E--EEEEGGGG-TTSSCEEEEEC---
T ss_pred             CCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCccccchhccCCCCc--E--EEeccccC-CCCcceeeeeH---
Confidence            667764 6788999999999999999999999973 22211   01112223  3  36689997 78999999999   


Q ss_pred             HHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCcccCCCCceEE
Q 015768          251 EGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEGAIYL  322 (400)
Q Consensus       251 ~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~  322 (400)
                      +++++.+...    ....+++.|+++..++.+.|+...+  ++..+++.++.++|++.|++    .+.+..+... |.++
T Consensus       302 ~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~m~  378 (454)
T 4ao9_A          302 ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT--PEAAGALAERGEALRARLNALCANEGVAMQFTGI-GSLM  378 (454)
T ss_dssp             HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC--HHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEE-TTEE
T ss_pred             HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc--cChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeee-ceEE
Confidence            7887766432    2456788899999999988875322  23444555555555555543    3443333333 3344


Q ss_pred             EeeCCCC-C--------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768          323 WARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       323 ~~~~~~~-~--------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      .+.+... .        .+   ...++..++ ++||++.|..      .+.+++. +|++|+++++++|++++.++..-
T Consensus       379 gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~~------~~~~s~~-~T~~dId~~l~al~~~l~~~~a~  449 (454)
T 4ao9_A          379 NAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPRG------FVVLSLP-LTDADIDRYVAAIGSFIGGHGAL  449 (454)
T ss_dssp             EEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTTC------EEECCTT-CCHHHHHHHHHHHHHHHHHSGGG
T ss_pred             EEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCCC------CEEEeCC-CCHHHHHHHHHHHHHHHHhcccc
Confidence            3443221 0        11   134555665 7899997743      3445555 59999999999999999987553

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.92  E-value=1.9e-24  Score=201.27  Aligned_cols=316  Identities=11%  Similarity=0.036  Sum_probs=208.4

Q ss_pred             CCcHHHHHHHHHhhcCCC---CCC----C-C--CCCCcHHHHHHHHHHHHhhcCCCC-CcEEE-eCChHHHHHHHHHHhc
Q 015768           43 QPPKMAMEKVKELVWDPS---ISK----Y-G--ADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLTLC  110 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~---~~~----y-~--~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~-~~g~t~a~~~~~~~l~  110 (400)
                      +.|++|++++.+.+.+..   ...    + +  ...-.++.|+.+++++    |++. ++|+| |+|+|++++.++..+.
T Consensus        37 ~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll----~~~~~~evif~t~~~T~a~n~ai~~l~  112 (386)
T 3qm2_A           37 MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL----NIPSNYKVLFCHGGGRGQFAGVPLNLL  112 (386)
T ss_dssp             CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH----TCCTTEEEEEEESCTTHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEEcCCchHHHHHHHHhcc
Confidence            468999999988775311   110    0 1  1234456666666666    7754 57888 6899999999999999


Q ss_pred             CCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC-CCHHH
Q 015768          111 DAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY-IPERL  185 (400)
Q Consensus       111 ~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~  185 (400)
                      ++||+|++..-++++.  ...++..| ++..+ +.+  ++|..++++.++..+++++  ++|.+++.+|.+|.+ .|   
T Consensus       113 ~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v-~~~~~~~G~~~~~~~~~~~l~~~t--~lV~~~h~et~tG~~i~p---  185 (386)
T 3qm2_A          113 GDKTTADYVDAGYWAASAIKEAKKYC-APQII-DAKITVDGKRAVKPMREWQLSDNA--AYLHYCPNETIDGIAIDE---  185 (386)
T ss_dssp             TTCCEEEEEESSHHHHHHHHHHTTTS-EEEEE-ECEEEETTEEEECCGGGCCCCTTC--SCEEECSEETTTTEECCC---
T ss_pred             CCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEE-ecCcccCCCCCCchHHHhhcCCCC--cEEEEECCcCCcCEecCc---
Confidence            9999987665555443  34456678 88888 777  5664467778888887766  889988888899996 78   


Q ss_pred             HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc--------HHHHHHH
Q 015768          186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFATQL  257 (400)
Q Consensus       186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~--------~~~~~~l  257 (400)
                      +++|.     +|+++++|.+++.+   ..+......+  +++.|.+|++|.+|  +|+++.+++.        +.+.+.-
T Consensus       186 i~~i~-----~g~~~~vDa~qs~g---~~pidv~~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~  253 (386)
T 3qm2_A          186 TPDFG-----PEVVVTADFSSTIL---SAPLDVSRYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYT  253 (386)
T ss_dssp             CCCCC-----TTCCEEEECTTTTT---SSCCCGGGCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHH
T ss_pred             hhhhc-----CCCEEEEEcccccC---CCCCCccccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHH
Confidence            55543     79999999999843   3344333344  56789999998566  6777776321        0011000


Q ss_pred             HH-hhccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCccc-C--CCCceEEEeeCCCCCC
Q 015768          258 LK-VQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVK-G--GEGAIYLWARLPEKHL  331 (400)
Q Consensus       258 ~~-~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~--~~~~~~~~~~~~~~~~  331 (400)
                      .. .......++|.+...++..+++...+  .+++..++.+++++++++.|++++..... .  ..+...+.+.++....
T Consensus       254 ~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~  333 (386)
T 3qm2_A          254 VLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTL  333 (386)
T ss_dssp             HHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGG
T ss_pred             HHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccc
Confidence            00 11122346677777777777764223  36788888999999999999988541211 1  1233566777764222


Q ss_pred             CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       332 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      + ..+...| +++||.+..|..+  .+.+|+|+.. +|++|++.+++.|+++.++
T Consensus       334 ~-~~~~~~L-~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~  384 (386)
T 3qm2_A          334 D-KVFLEES-FAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERR  384 (386)
T ss_dssp             H-HHHHHHH-HHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             c-HHHHHHH-HHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3 5666665 5889999887643  3569999988 8999999999999988765

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.92  E-value=5.1e-23  Score=189.95  Aligned_cols=324  Identities=14%  Similarity=0.119  Sum_probs=220.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCC---CCCCcHHHHHHHHHHHHhhcCCC-CCcEEE-eCChHHH
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYG---ADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQA  101 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~---~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~-~~g~t~a  101 (400)
                      +..+.|..|-  .+.|++|++++.+.+.+..   ...|.   ......++.+...+.+++.+|++ +.+|+| |+|+|++
T Consensus         4 ~~~~~f~pgp--t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a   81 (361)
T 3m5u_A            4 MRKINFSAGP--STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQ   81 (361)
T ss_dssp             CCCEECCSSS--CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHH
T ss_pred             cceEeecCCC--CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHH
Confidence            3556676653  3467999999999876421   11110   11112345555566666666886 458888 9999999


Q ss_pred             HHHHHHHhcCCCCEEEEeCCCccc--hhHHHHhcCcEEEEeccCCCCC-CCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768          102 FVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (400)
Q Consensus       102 ~~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~-~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG  178 (400)
                      ++.++..+. +||++++..-++++  +...++..|+++..+ +.+.++ +..+++. +  +++++  ++|.+++.+|.+|
T Consensus        82 ~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~-~~~~~g~~~~~~~~-~--l~~~t--~lv~~~~~e~~tG  154 (361)
T 3m5u_A           82 FAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTV-ASSEESNFDHIPRV-E--FSDNA--DYAYICSNNTIYG  154 (361)
T ss_dssp             HHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEE-EECTTTTSCSCCCC-C--CCTTS--SEEEEESEETTTT
T ss_pred             HHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEE-ecccCcCCCcCChh-h--cCCCC--CEEEEeCCCCCcc
Confidence            999999998 78865332222323  345567789998888 777665 2245555 3  76665  9999998889999


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768          179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  258 (400)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~  258 (400)
                      .+++.     |   ++ +|+++++|.+++.+   ..+....  ..++++.|.+|++|.+|  +|+++.+   +++.+++.
T Consensus       155 ~~~~~-----i---~~-~~~~~~vD~~q~~g---~~~id~~--~~d~~~~s~~K~~gp~G--~g~l~~~---~~~~~~~~  215 (361)
T 3m5u_A          155 TQYQN-----Y---PK-TKTPLIVDASSDFF---SRKVDFS--NIALFYGGVQKNAGISG--LSCIFIR---KDMLERSK  215 (361)
T ss_dssp             EECSS-----C---CC-CSSCEEEECGGGTT---SSCCCCT--TEEEEEEETTTTSSCTT--CEEEEEE---HHHHHHHH
T ss_pred             eeCCc-----c---cc-cCCEEEEEcccccC---CCCCCcc--cCCEEEEechhccCCCc--cEEEEEc---HHHHhhhc
Confidence            98772     2   23 49999999999843   2233222  35788999999998666  6888888   66666554


Q ss_pred             H-------------hhccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-cccC-C--CCc
Q 015768          259 K-------------VQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVKG-G--EGA  319 (400)
Q Consensus       259 ~-------------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~-~--~~~  319 (400)
                      .             .......+++.....++..+++.-.+  .++++.++.+++.+++++.|++++++ .... +  .+.
T Consensus       216 ~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~  295 (361)
T 3m5u_A          216 NKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSL  295 (361)
T ss_dssp             TCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCS
T ss_pred             CCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCC
Confidence            3             01123356788888777777764222  36788888999999999999998853 3321 1  223


Q ss_pred             eEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       320 ~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      ..+.+.++. ...+ .++...| +++||.+.+|..  ..+.+|+|++. +|++|++.+++.|+++.++
T Consensus       296 ~ivsf~~~~~~~~~-~~~~~~L-~~~gI~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~  359 (361)
T 3m5u_A          296 MNVSFNIAKNKDLE-PLFVKEA-EEAGMIGLKGHR--ILGGIRASIYNALNLDQVKTLCEFMKEFQGK  359 (361)
T ss_dssp             SEEEEEESSCTTHH-HHHHHHH-HHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCchhhh-HHHHHHH-HHCCCEEecCCC--ccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence            466677764 1112 4666655 588999988753  23569999988 8999999999999988765

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.91  E-value=2.7e-23  Score=209.39  Aligned_cols=299  Identities=15%  Similarity=0.086  Sum_probs=199.7

Q ss_pred             HHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCC----CC-
Q 015768           76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL----HP-  150 (400)
Q Consensus        76 ~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~-  150 (400)
                      ...+.+++.+|.+ +.+++++|+++++..++.++++|||+|+++.++|.++...++..|++++.+ +.+.+.+    .+ 
T Consensus       209 ~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v-~~~~~~~g~~g~i~  286 (755)
T 2vyc_A          209 ESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYM-VPSRNRYGIIGPIY  286 (755)
T ss_dssp             HHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEE-CCCBCTTSCBCCCC
T ss_pred             HHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCCCCccccccccC
Confidence            3344444444754 557888888999999999999999999999999999999999999999998 6654322    24 


Q ss_pred             ----CHHHHHHhhccCCC--------CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC---
Q 015768          151 ----DADWLEKTLETKPT--------PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR---  214 (400)
Q Consensus       151 ----~~e~l~~~l~~~~~--------~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~---  214 (400)
                          |++.+++.+++.+.        ++++++++| |++|.+.+   +++|+++|++||+++++|++|+... ++..   
T Consensus       287 ~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~  362 (755)
T 2vyc_A          287 PQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD  362 (755)
T ss_dssp             GGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT
T ss_pred             cCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccCcccCC
Confidence                89999999874321        348999998 79999999   8999999999999999999997432 2211   


Q ss_pred             --Cccc---c-CCCcEEEEeccccccCCCcce-eEEEEccCCcHHH-HHHHHHh-hccCCcCccHHHHHHHHHHhcCCc-
Q 015768          215 --KHCC---V-EGDHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGF-ATQLLKV-QDNIPICASIISQHLALYSLQTGP-  284 (400)
Q Consensus       215 --~~~~---~-~~~~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~-  284 (400)
                        ....   . ..++++++.|+||+++  |.+ .|+++.++....+ ..++... ....+.+++.+...++..+++... 
T Consensus       363 ~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~  440 (755)
T 2vyc_A          363 HYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDG  440 (755)
T ss_dssp             SSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHST
T ss_pred             cchhcCCcCCccCCCeEEEECcccccc--CcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence              1111   1 1235568999999874  544 5777665420001 1222221 122245566666665555554211 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCC---------CcccCCC--------------------------------------
Q 015768          285 EWVTERVKDLVRNREIIREALSPLGE---------GAVKGGE--------------------------------------  317 (400)
Q Consensus       285 ~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~~~~~--------------------------------------  317 (400)
                      +...++.+++.++.+.+++.|+++++         +++..+.                                      
T Consensus       441 ~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  520 (755)
T 2vyc_A          441 NSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHG  520 (755)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccccc
Confidence            11345566666666677766665432         2222211                                      


Q ss_pred             -----Cc------eEEEeeCCCC---------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHH
Q 015768          318 -----GA------IYLWARLPEK---------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAA  376 (400)
Q Consensus       318 -----~~------~~~~~~~~~~---------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~  376 (400)
                           .+      ..+.+.++..         +.+...+..+|. ++||.+...    ..+.+|+.++. .|+++++.++
T Consensus       521 ~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~-~~gI~~e~~----~~~~v~~~~~~g~t~~~~~~l~  595 (755)
T 2vyc_A          521 FKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG-RHGIVPTRT----TDFQIMFLFSMGVTRGKWGTLV  595 (755)
T ss_dssp             CTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHH-TTTCCCSEE----CSSEEEEECCTTCCTTTTHHHH
T ss_pred             ccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHH-HCCCEEeec----CCCeEEEEECCCCCHHHHHHHH
Confidence                 11      2344555431         234578888774 799887542    46889999888 8999999999


Q ss_pred             HHHHHHHHHHh
Q 015768          377 DRLRRGLEELV  387 (400)
Q Consensus       377 ~~l~~~l~~~~  387 (400)
                      +.|.+..+.+.
T Consensus       596 ~al~~~~~~~~  606 (755)
T 2vyc_A          596 NTLCSFKRHYD  606 (755)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhhh
Confidence            99999887664

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.91  E-value=6e-23  Score=194.99  Aligned_cols=347  Identities=14%  Similarity=0.083  Sum_probs=223.4

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+.....+...  ..+...++++.|.+.... ..+.++|++++++|+
T Consensus        61 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~  138 (456)
T 4atq_A           61 VDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVT--PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAV  138 (456)
T ss_dssp             TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTS--CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred             CCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCcc--CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHH
Confidence            4578899998874  4554 789999999988875321111111  123334566666665533 356899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cC-------------cEEEEeccCCC-----CCCCCCHHHHHHhhc-
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG-------------VTHILVGPCSS-----KTLHPDADWLEKTLE-  160 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~~-----~~~~~~~e~l~~~l~-  160 (400)
                      +.+++...  ....+|+....+|++....... .+             ..+..+ |...     .....+.+.+++.+. 
T Consensus       139 e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~  217 (456)
T 4atq_A          139 ENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRM-PMSYPFREENPEITGAEAAKRAITM  217 (456)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCGGGCSSTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceec-ccccccccCCCcccHHHHHHHHHHH
Confidence            99998764  2347899999999987643321 11             123333 3221     000112333333322 


Q ss_pred             -----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768          161 -----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY  234 (400)
Q Consensus       161 -----~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  234 (400)
                           ....+.+++++..+...|.+ .+.+++++|.++|++||+++|+||++.++...|..+.....+....+-+++|.+
T Consensus       218 ~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~l  297 (456)
T 4atq_A          218 IEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGI  297 (456)
T ss_dssp             HHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGG
T ss_pred             HHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcc
Confidence                 11236788888666667764 678899999999999999999999999876555433222222111133567999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCC
Q 015768          235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGE  310 (400)
Q Consensus       235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~  310 (400)
                      | .|+++|.++.+   +++.+.+.......+++.++++..++.+.|+..++  +...++.++..+++.+.|++    ++.
T Consensus       298 g-gg~P~~av~~~---~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~  371 (456)
T 4atq_A          298 A-GGLPLSAITGR---ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQ--HDLNGRARHIEELALGKLRELAAELSA  371 (456)
T ss_dssp             G-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             c-CcCCceeeEec---HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            7 88999999999   78877777666778999999999999998875221  22334444444445444443    221


Q ss_pred             -----CcccCCCCceEEEeeCCCCC---CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHH
Q 015768          311 -----GAVKGGEGAIYLWARLPEKH---LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADR  378 (400)
Q Consensus       311 -----~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~  378 (400)
                           +.-++.. |.++-+.+....   .+   ..++...++ ++|+++.++..  ..+.|||.+.. .|++++++++++
T Consensus       372 ~~~~~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~-~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~  447 (456)
T 4atq_A          372 GGGSVVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACL-KEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEV  447 (456)
T ss_dssp             ----CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred             ccCCceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHH-HCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence                 1112333 455555543211   01   345666665 89999876432  35789999886 899999999999


Q ss_pred             HHHHHHHH
Q 015768          379 LRRGLEEL  386 (400)
Q Consensus       379 l~~~l~~~  386 (400)
                      |.+++++.
T Consensus       448 l~~al~a~  455 (456)
T 4atq_A          448 LAAAIKAH  455 (456)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhh
Confidence            99999864

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.90  E-value=1.5e-21  Score=186.04  Aligned_cols=346  Identities=14%  Similarity=0.099  Sum_probs=224.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCC-CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADE-GLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~-g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++|+..+.  +.++ .+|++.+++.+.+.+..  .++... ...+...++++.|.+......+.++|++++++|+
T Consensus        64 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~  141 (473)
T 4e3q_A           64 VNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAN  141 (473)
T ss_dssp             TTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHH
T ss_pred             CCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHH
Confidence            4578899998876  3444 68999999999887632  121111 1234455677777776655567899999999999


Q ss_pred             HHHHHHhc-------CCC-CEEEEeCCCccchhHHH-HhcCc-----------EEEEeccCC------CCCCC------C
Q 015768          103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYMSF-QMTGV-----------THILVGPCS------SKTLH------P  150 (400)
Q Consensus       103 ~~~~~~l~-------~~g-d~vlv~~p~~~~~~~~~-~~~g~-----------~~~~~~~~~------~~~~~------~  150 (400)
                      +.+++...       +++ .+|+....+|++..... ...|-           ....+ +..      +.+..      .
T Consensus       142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  220 (473)
T 4e3q_A          142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHL-TCPHYWRYGEEGETEEQFVAR  220 (473)
T ss_dssp             HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEE-CCCCHHHHSCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCccccc-CCCcccccccccchhhHHHHH
Confidence            99999753       233 57899999998855433 22210           12222 211      11100      0


Q ss_pred             CHHHHHHhhc-c-CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768          151 DADWLEKTLE-T-KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL  227 (400)
Q Consensus       151 ~~e~l~~~l~-~-~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~  227 (400)
                      ..+++++.+. . ...+.+|+++..+...|.+ .+++++++|.++|++||+++|.||++.+|...+..+.....+....+
T Consensus       221 ~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi  300 (473)
T 4e3q_A          221 LARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDA  300 (473)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSE
T ss_pred             HHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCCh
Confidence            1234455444 1 1225677777667667764 67789999999999999999999999988655543222111111113


Q ss_pred             eccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      -+++|.++ .| +++|.++.+   +++.+.+...       .+..+++.++++..++.+.|+..++  +...++.++..+
T Consensus       301 ~t~~K~l~-gG~~Pl~av~~~---~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~--~~l~~~~~~~g~  374 (473)
T 4e3q_A          301 IISSKNLT-AGFFPMGAVILG---PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN--EGLAENVRRLAP  374 (473)
T ss_dssp             EEECGGGG-TTSSCCEEEEEC---HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH--SSHHHHHHHHHH
T ss_pred             HHhccccc-CCCCCccccccc---HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc--ccHHHHHHHHHH
Confidence            35689997 55 899999999   7887776542       3467888999999999988875221  234445555666


Q ss_pred             HHHHHhccC---CCCcccCCCCceEEEeeCCCCC----------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768          300 IIREALSPL---GEGAVKGGEGAIYLWARLPEKH----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  366 (400)
Q Consensus       300 ~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~  366 (400)
                      +|.+.|+++   +.+.-+... |.+.-+.+....          .....+...++ ++|+++.+.     .+.+||++..
T Consensus       375 ~l~~~L~~l~~~~~v~~vRG~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~~i~l~PPL  447 (473)
T 4e3q_A          375 RFEERLKHIAERPNIGEYRGI-GFMWALEAVKDKASKTPFDGNLSVSERIANTCT-DLGLICRPL-----GQSVVLCPPF  447 (473)
T ss_dssp             HHHHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEEE-----TTEEEECCCT
T ss_pred             HHHHHHHHHhcCCCeeEEeec-ceEEEEEEecCccccccccccHHHHHHHHHHHH-HCCcEEEec-----CCEEEEeCCC
Confidence            666666553   332222333 444444432111          01345666665 899999873     4689999876


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHhc
Q 015768          367 -LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       367 -~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                       +|++++++++++|.++++++..
T Consensus       448 ~it~~eid~~~~~l~~al~~v~a  470 (473)
T 4e3q_A          448 ILTEAQMDEMFDKLEKALDKVFA  470 (473)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH
Confidence             8999999999999999998765

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.88  E-value=5.6e-21  Score=175.34  Aligned_cols=359  Identities=16%  Similarity=0.131  Sum_probs=243.4

Q ss_pred             hhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhc
Q 015768           12 LETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQEN   85 (400)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~   85 (400)
                      ...+...+..+.+...++..-|+|-.++|..  ++.|++++...+.+....+      |+...-.+.++....++..+.+
T Consensus        36 ~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~--S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF  113 (490)
T 3ou5_A           36 SDSDPEMWELLQREKDRQCRGLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAF  113 (490)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHT
T ss_pred             hhhCHHHHHHHHHHHHHHHcCceEecCCCcC--CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHh
Confidence            3455667777777888888889998888775  5999999988887643333      3334556678888888888889


Q ss_pred             CCCCC----cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH--------HhcC--cEEEEeccCCCCCCCCC
Q 015768           86 KLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF--------QMTG--VTHILVGPCSSKTLHPD  151 (400)
Q Consensus        86 ~~~~~----~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~~  151 (400)
                      |++..    +|.. .+++.|+..++.+|++|||+|+..+..+.++...-        ...|  .+.+.+ +++++...+|
T Consensus       114 ~a~~A~w~VNVQP-~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y-~vd~~t~~ID  191 (490)
T 3ou5_A          114 DLDPAQWGVNVQP-YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLID  191 (490)
T ss_dssp             TCCTTTEEEECCC-SSHHHHHHHHHHHHCC-CCCEECBC----------------------------CB-CEETTTTEEC
T ss_pred             CCCccccCCCCCc-CCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccccccccccc-ccCCCCCccc
Confidence            98765    3444 45669999999999999999999888876665321        1122  255666 6777777899


Q ss_pred             HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEecc
Q 015768          152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSF  230 (400)
Q Consensus       152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~  230 (400)
                      .|.++++..... ||+|+.-...+|  ..+|   .+++.++|++.|.++++|.+|..+.. ++....+... .+++++|.
T Consensus       192 yd~~~~~A~~~k-PklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVTtTT  264 (490)
T 3ou5_A          192 YNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-ADIVTTTT  264 (490)
T ss_dssp             HHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEES
T ss_pred             HHHHHHHHhhcC-CCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ceEEeccc
Confidence            999999887544 699987644444  6778   77777888899999999999975554 3332233333 67999999


Q ss_pred             ccccCCCcceeEEEEccCCc------------HHHHHHHHHhhccCCcCccHH-HHHHHHHHhcC-CcHHHHHHHHHHHH
Q 015768          231 SKAYGMMGWRVGYIAYPSEV------------EGFATQLLKVQDNIPICASII-SQHLALYSLQT-GPEWVTERVKDLVR  296 (400)
Q Consensus       231 sK~~g~~g~~~G~i~~~~~~------------~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~-~~~~~~~~~~~~~~  296 (400)
                      ||.+  +|.|.|.|.++++.            .++.+++...-.....+.+-. ...+.+.++.+ ....++.+.++..+
T Consensus       265 HKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~  342 (490)
T 3ou5_A          265 HKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLK  342 (490)
T ss_dssp             SSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             cccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHH
Confidence            9998  68899999987521            146677776554333333322 22333333332 23567899999999


Q ss_pred             HHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCc-cCCCCeEEEEecc-----
Q 015768          297 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGA-CGCRGHLRISFGG-----  366 (400)
Q Consensus       297 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~-~~~~~~iRi~~~~-----  366 (400)
                      |++.|.+.|.+.|...+.+......+++++.....++.+....| ++.||.+.    |+.. ...+..|||+...     
T Consensus       343 NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~L-e~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG  421 (490)
T 3ou5_A          343 NARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVL-ELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQ  421 (490)
T ss_dssp             HHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTT
T ss_pred             HHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHH-HHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCC
Confidence            99999999999887445566657788888876555776666654 68999985    3321 0125689998652     


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 015768          367 LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~  384 (400)
                      +.++|+.+..+.|.+++.
T Consensus       422 ~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          422 FREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             CCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            678899999998888875

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.87  E-value=1.1e-19  Score=179.99  Aligned_cols=298  Identities=14%  Similarity=0.098  Sum_probs=193.6

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH  149 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  149 (400)
                      ..++++.+|+++    |.+ ..+++++|++.|+..++.++++|||+|+++.++|.++...++..|++++++ +.+.+.+.
T Consensus       197 i~eaE~~lA~~f----Ga~-~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v-~~~~~~~g  270 (715)
T 3n75_A          197 HKEAEQYIARVF----NAD-RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYF-RPTRNAYG  270 (715)
T ss_dssp             HHHHHHHHHHHH----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEE-CCCBCTTC
T ss_pred             HHHHHHHHHHHh----CCC-CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-eccccccc
Confidence            345555555555    642 345666777899999999999999999999999999999999999999999 65433343


Q ss_pred             ----C-----CHHHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC-C
Q 015768          150 ----P-----DADWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR-K  215 (400)
Q Consensus       150 ----~-----~~e~l~~~l~~~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~-~  215 (400)
                          +     |++.+++++++.+.   ++++++++| |++|.+.+   +++|.++|++++  +++||+|+.+. ++.. +
T Consensus       271 i~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~~~~  344 (715)
T 3n75_A          271 ILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE  344 (715)
T ss_dssp             CBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred             cccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCCccc
Confidence                3     89999999984322   348999999 99999999   778888887653  79999998553 3221 1


Q ss_pred             -ccccC----CCcE-EEEeccccccCCCcc-eeEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCc-HH
Q 015768          216 -HCCVE----GDHV-VNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGP-EW  286 (400)
Q Consensus       216 -~~~~~----~~~~-i~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~  286 (400)
                       .....    .+.. +++.|+||+++  |+ ..|++..++..  ..+++..... ..+.+++.+...++..+++... ..
T Consensus       345 ~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i--~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~  420 (715)
T 3n75_A          345 GKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV--NEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA  420 (715)
T ss_dssp             TSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC--CHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHH
T ss_pred             cccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh--hHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhc
Confidence             11221    2332 55899999985  43 45888776531  1222332222 2355677777776666664322 13


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCC------CcccCCC------------------------C-----ceEEEeeCCCC--
Q 015768          287 VTERVKDLVRNREIIREALSPLGE------GAVKGGE------------------------G-----AIYLWARLPEK--  329 (400)
Q Consensus       287 ~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~------------------------~-----~~~~~~~~~~~--  329 (400)
                      ..++++++.++.+++++.|++++.      +++..+.                        +     ..-+++.++..  
T Consensus       421 g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~  500 (715)
T 3n75_A          421 GKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEK  500 (715)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCC
Confidence            355667777777777777765431      1111111                        0     11233444431  


Q ss_pred             -------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          330 -------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       330 -------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                             +..+..+.++| +++||.+.-..    ...+-+-++. .++++++.++++|.+.-+.+.+
T Consensus       501 ~G~~~~~Gi~g~~~~~~L-~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~~~  562 (715)
T 3n75_A          501 DGTMSDFGIPASIVAKYL-DEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRAFDL  562 (715)
T ss_dssp             TSCBCSSCCCHHHHHHHH-HHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCccccCCCcHHHHHHHH-HHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence                   24567788877 57899885432    3444444443 5889999988888877665543

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.84  E-value=5.7e-21  Score=193.81  Aligned_cols=339  Identities=11%  Similarity=0.030  Sum_probs=214.1

Q ss_pred             CeEEcCCCC--CCCC-C-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHH
Q 015768           31 NAVSLAQGV--VYWQ-P-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI  105 (400)
Q Consensus        31 ~~i~~~~~~--~~~~-~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~  105 (400)
                      .++|+.++.  +.++ . +|++.+++.+.+.+.....+ .. ...+...+++++|.+..+-. .+.++|+++|++|++.+
T Consensus       381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~-~~-~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~A  458 (831)
T 4a0g_A          381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMF-PE-NVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIA  458 (831)
T ss_dssp             EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCC-TT-EECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHH
T ss_pred             heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccc-cc-cCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHH
Confidence            678887763  4455 4 89999999988875321111 11 12244456777777665433 47899999999999999


Q ss_pred             HHHhc-----CC------------CCEEEEeCCCccchh-HHHHhcCc---------------EEE-------------E
Q 015768          106 VLTLC-----DA------------GDSVVMFAPYYFNSY-MSFQMTGV---------------THI-------------L  139 (400)
Q Consensus       106 ~~~l~-----~~------------gd~vlv~~p~~~~~~-~~~~~~g~---------------~~~-------------~  139 (400)
                      ++...     ..            ..+|+....+|++-. ..+...|.               .+.             .
T Consensus       459 lK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  538 (831)
T 4a0g_A          459 LKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWN  538 (831)
T ss_dssp             HHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEE
T ss_pred             HHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceE
Confidence            98862     12            247888899987754 33333321               000             1


Q ss_pred             eccCCCC---------CCCCC------------------HHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-CCHH
Q 015768          140 VGPCSSK---------TLHPD------------------ADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-IPER  184 (400)
Q Consensus       140 ~~~~~~~---------~~~~~------------------~e~l~~~l~~------~~~~~~v~l~~p-~nptG~~-~~~~  184 (400)
                      + +....         .+. +                  ++.|++.+..      ...+++|+++.. ++..|.. +|.+
T Consensus       539 ~-~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~  616 (831)
T 4a0g_A          539 I-SLPESFSEIAPEYGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPL  616 (831)
T ss_dssp             E-ECCTTSCCCCSSTTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHH
T ss_pred             e-cCCcccccccccccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHH
Confidence            1 11100         000 1                  2567777752      223577777764 7877875 5889


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCccccC--CCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-  260 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-  260 (400)
                      ++++|.++|++||+++|+||++.+|...|..+....  -..++  .+++|.++ +| +++|+++++   +++++.+... 
T Consensus       617 ~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi--itlsK~L~-gG~~Plgav~~~---~~i~~~~~~~~  690 (831)
T 4a0g_A          617 FQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDI--ACFAKLLT-GGMVPLAVTLAT---DAVFDSFSGDS  690 (831)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSE--EEECGGGG-TTSSCCEEEEEC---HHHHHTTCSSC
T ss_pred             HHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcE--EEEecccc-cCccCcEEEEEC---HHHHHHHhccc
Confidence            999999999999999999999998766554332111  11223  36899997 57 799999999   7887776532 


Q ss_pred             -----hccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHH----HHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768          261 -----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN----REIIREALSPLGEGAVKGGEGAIYLWARLPEK  329 (400)
Q Consensus       261 -----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~----~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  329 (400)
                           ....+++.++++..++.+.|+..  ++...+..+.....    .+.+.+.+++.+.+..+... |.+..+.+...
T Consensus       691 ~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~  769 (831)
T 4a0g_A          691 KLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVI-GTLFALELKAD  769 (831)
T ss_dssp             GGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC--
T ss_pred             ccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeec-ccEEEEEEecC
Confidence                 24567888999999988888741  11111111100111    12344555556654444444 55555565321


Q ss_pred             C-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          330 H-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       330 ~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .       ....++...++ ++||++.|+     .+.+||++.. ++++++++++++|.++++++
T Consensus       770 ~~~~~~~~~~a~~~~~~l~-e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l  828 (831)
T 4a0g_A          770 ASNSGYASLYAKSLLIMLR-EDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF  828 (831)
T ss_dssp             -------CHHHHHHHHHHH-HTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred             ccccccchHHHHHHHHHHH-HCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            0       11345676665 799999874     4799999665 79999999999999998765

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.82  E-value=4.3e-18  Score=157.06  Aligned_cols=309  Identities=13%  Similarity=0.062  Sum_probs=199.7

Q ss_pred             HHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCC----CCEEEEeCCCccchhHHHHhcCcEEEEeccC-CC
Q 015768           72 ELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SS  145 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~  145 (400)
                      .+.+.++-.+-+..|++. ...++++|+|.++..++.+.+++    ||.|+++..+|.++..++..+|++++++.|. ++
T Consensus       116 ~ltn~l~ld~L~~~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~  195 (501)
T 3hl2_A          116 KITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEG  195 (501)
T ss_dssp             HHHHHHHHHHHHHTTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEET
T ss_pred             HHHHHHHHHHHHHcCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecc
Confidence            344444444444448874 56899999998888888777653    4999999999999999999999999999442 23


Q ss_pred             CCCCCCHHHHHHhhccCC-CCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCC
Q 015768          146 KTLHPDADWLEKTLETKP-TPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEG  221 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~-~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~  221 (400)
                      +...+|++.++++|++.. ...++++. .+.|..|.+-+   +++|+++|++||+++++|+||+.......  +......
T Consensus       196 ~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~  272 (501)
T 3hl2_A          196 DELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV  272 (501)
T ss_dssp             TEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhc
Confidence            346789999999998532 23444444 44554556677   99999999999999999999985431110  0111122


Q ss_pred             C-cEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          222 D-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       222 ~-~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      + .|+++.|.+|.+- ..++.|.+..++  +++++++........  ...++.......+..+.+.+++..++..++.++
T Consensus       273 GrAD~vVqS~HK~ll-vpIGG~ii~~~d--~e~l~~~~~~yPGr~--S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~  347 (501)
T 3hl2_A          273 GRIDAFVQSLDKNFM-VPVGGAIIAGFN--DSFIQEISKMYPGRA--SASPSLDVLITLLSLGSNGYKKLLKERKEMFSY  347 (501)
T ss_dssp             SCCCEEEEEHHHHHC-CCSSCEEEEESC--HHHHHHHHHTSCSCB--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEecccccce-eecCceEEEeCC--HHHHHHHHHhCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3 7788999999984 334446665665  677777755432222  233333333344443456678888888888889


Q ss_pred             HHHHhccCCC---CcccCCC-CceEEEeeCCCCC----CCHHHHHHHHHHhcCe---EE-eCCC----------ccC---
Q 015768          301 IREALSPLGE---GAVKGGE-GAIYLWARLPEKH----LDDFEVVRWLAHRHGV---VV-IPGG----------ACG---  355 (400)
Q Consensus       301 l~~~L~~~~~---~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi---~v-~~g~----------~~~---  355 (400)
                      |++.|+++..   .++.... ...-+-+.+....    .+...+-..|. .++|   .+ .+|.          .|+   
T Consensus       348 L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf-~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~  426 (501)
T 3hl2_A          348 LSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLF-TRQVSGARVVPLGSMQTVSGYTFRGFMSHT  426 (501)
T ss_dssp             HHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHH-HTTCCSCEEECTTCCEEETTEEESSTTTTS
T ss_pred             HHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHH-hcCCCcceeecCCCceEECCeeecCcccCC
Confidence            8888887421   2333222 2223333443211    11334444444 4554   33 3444          333   


Q ss_pred             ---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          356 ---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       356 ---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                         ...++=++.+. ++.+|++.++++|.+++.++.++
T Consensus       427 ~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~  464 (501)
T 3hl2_A          427 NNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE  464 (501)
T ss_dssp             SCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             CCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence               13577777665 89999999999999999998754

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.79  E-value=2.3e-17  Score=154.41  Aligned_cols=310  Identities=14%  Similarity=0.058  Sum_probs=199.8

Q ss_pred             cHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCC----CCEEEEeCCCccchhHHHHhcCcEEEEeccC-
Q 015768           70 LPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-  143 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-  143 (400)
                      ...+.+.+..++.+..|++.. ..++++|+|.++..++.+.+++    ++.|+++..+|.++..++...|+.++.+.|. 
T Consensus        96 ~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~  175 (450)
T 3bc8_A           96 LNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  175 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeee
Confidence            456788888888888898754 4588999985555555555433    7999999999999999999999998888332 


Q ss_pred             CCCCCCCCHHHHHHhhccCC-CCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--ccc
Q 015768          144 SSKTLHPDADWLEKTLETKP-TPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCV  219 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~  219 (400)
                      +++.+.+|++.++++|+..+ ..+++++.+| ++.+|.+-|   +++|+++|++||+++++|+||+.......+.  ...
T Consensus       176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~  252 (450)
T 3bc8_A          176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  252 (450)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHh
Confidence            12345789999999997432 1345555555 455678888   9999999999999999999998533211000  111


Q ss_pred             C-CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          220 E-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       220 ~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      . ...+.++.|.+|++. .....+++..++  ++..+++.......  ....++...+...+..+.+.+.+..++..++.
T Consensus       253 ~~~~AD~~v~S~HK~l~-a~~~~~~l~~rd--~~~~~~~~~~~~g~--~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a  327 (450)
T 3bc8_A          253 RVGRIDAFVQSLDKNFM-VPVGGAIIAGFN--EPFIQDISKMYPGR--ASASPSLDVLITLLSLGCSGYRKLLKERKEMF  327 (450)
T ss_dssp             HHSCCCEEEEEHHHHHS-CCSSCEEEEESC--HHHHHHHHHHSCSC--BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEECCccCCC-chhccEEEEecC--HHHHHHHHHHhhcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1 256678889999995 445667777665  66666665433211  11223344444444435556677777778888


Q ss_pred             HHHHHHhccCC---CCcccCCCC-ceEEEeeCCC----CCCCHHHHHHHHHHhcC---eEEeC---------------CC
Q 015768          299 EIIREALSPLG---EGAVKGGEG-AIYLWARLPE----KHLDDFEVVRWLAHRHG---VVVIP---------------GG  352 (400)
Q Consensus       299 ~~l~~~L~~~~---~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~l~~~~g---i~v~~---------------g~  352 (400)
                      +++++.|++++   +.++.+... +.-..+.++.    ...|..++.-.+. ..|   ..+.+               |.
T Consensus       328 ~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~-~~g~sG~~v~~~~~~~~~~~~~l~~~gi  406 (450)
T 3bc8_A          328 VYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLF-TRQVSGARAVPLGNVQTVSGHTFRGFMS  406 (450)
T ss_dssp             HHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHH-HTTCCSCEEECSCCEEEETTEEEETTTT
T ss_pred             HHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEec-CCCCccceeeecccccchhHHHHHHcCC
Confidence            88888887665   445544321 1111122221    0124556665553 344   33321               11


Q ss_pred             cc--CCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          353 AC--GCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       353 ~~--~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      ..  ....++-+.++. .+++|++.++++|++.+.++.+
T Consensus       407 ~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~  445 (450)
T 3bc8_A          407 HADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK  445 (450)
T ss_dssp             TSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            11  124566666555 7999999999999999887654

>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}

Probab=80.15  E-value=16  Score=27.85  Aligned_cols=109  Identities=14%  Similarity=0.104  Sum_probs=64.9

Q ss_pred             CCCCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768           86 KLYKSSVMVTAGA--NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (400)
Q Consensus        86 ~~~~~~i~~~~g~--t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~  163 (400)
                      .+|...++++-+.  -..+.-+...+.+-|-+|+.+.    +....++..|+.+..+....+.|..-+..++.+.+..+.
T Consensus        21 ~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~----GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~   96 (143)
T 2yvq_A           21 KIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATE----ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGS   96 (143)
T ss_dssp             CCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEH----HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTS
T ss_pred             CCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECc----hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCC
Confidence            3443345665443  4555556667777788888876    445677888988777722222211001124666676554


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                       +.+|+-+    |.+...+..+-..|.+.|-+||++++..
T Consensus        97 -i~lVInt----~~~~~~~~~d~~~iRR~Av~~~IP~~T~  131 (143)
T 2yvq_A           97 -IDLVINL----PNNNTKFVHDNYVIRRTAVDSGIPLLTN  131 (143)
T ss_dssp             -CCEEEEC----CCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred             -ceEEEEC----CCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence             5666633    2332234567888999999999998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	400
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	1e-70
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	2e-64
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-61
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	7e-53
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	8e-41
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	2e-36
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	2e-35
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	2e-34
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	6e-33
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	9e-33
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	3e-32
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	4e-32
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	6e-32
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	1e-31
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	3e-31
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-31
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	4e-30
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	4e-30
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	4e-27
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-26
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	3e-26
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	1e-24
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	3e-24
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	1e-21
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	2e-18
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	2e-15
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	1e-10
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	2e-10
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	8e-09
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	4e-08
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	8e-08
d2e7ja1	364	c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (	8e-07
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	9e-07
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	2e-06
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	1e-05
d1h0ca_	388	c.67.1.3 (A:) Alanine-glyoxylate aminotransferase	4e-05
d1v72a1	345	c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Ps	2e-04
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	0.002

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  224 bits (572), Expect = 1e-70
 Identities = 89/394 (22%), Positives = 172/394 (43%), Gaps = 19/394 (4%)

Query: 6   KLAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI 61
           KLA R         + I  + + +     +  S + G   +  PK  +E  K  + +   
Sbjct: 2   KLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAAL-EQGK 60

Query: 62  SKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           ++YG   G P LR+A+ +KL ++N L     +++VT G  Q+  N++L + + GD V++ 
Sbjct: 61  TRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIP 120

Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179
           AP++ +     ++   T +++            + + + +   P  KL+    P NP+G 
Sbjct: 121 APFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI--TPKTKLLVFNTPSNPTGM 178

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG------DHVVNLFSFSKA 233
                 ++ I+ +   AG W++ D  YE  +YD  +H  +        +  V    F+K 
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238

Query: 234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKD 293
           Y M GWRVG++A P  +        K+Q +        +Q+ A+ + +   + V E +  
Sbjct: 239 YAMTGWRVGFLAGPVPL---VKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAA 295

Query: 294 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA 353
               R  + +AL+ +        +GA Y++  + +      +    L  +H V  +PG A
Sbjct: 296 FAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAA 355

Query: 354 CGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387
            G    +R+S+     D  K   +RL + L  ++
Sbjct: 356 FGADDCIRLSY-ATDLDTIKRGMERLEKFLHGIL 388

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  208 bits (531), Expect = 2e-64
 Identities = 97/384 (25%), Positives = 172/384 (44%), Gaps = 14/384 (3%)

Query: 6   KLAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI 61
            L++R    +    + +  +  EL R   + V+L  G   +  P+   E  +  +     
Sbjct: 3   GLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-K 61

Query: 62  SKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G+PELR+AL +K  +EN   +     +VT G +QA  N+   + D GD V++ 
Sbjct: 62  TKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL 121

Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179
           +PY+ +     +  G   + V     +   PD + + + +   P  K + V +P NP+G 
Sbjct: 122 SPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGA 179

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMM 237
             P+ +L+ ++ L      +LV D  YE+ +Y+G          +H + +   +KA+ M 
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239

Query: 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 297
           GWR+GY   P EV      + +     P   +  +   AL + +    +V    +   R 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRR 299

Query: 298 REIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR 357
           R+++ E L+ LG  AV+   GA Y+         D+      L    GV V+PG      
Sbjct: 300 RDLLLEGLTALGLKAVR-PSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAF 357

Query: 358 GHLRISFGGLVEDDCKAAADRLRR 381
           GH+R+S+    E++ + A +R  R
Sbjct: 358 GHVRLSY-ATSEENLRKALERFAR 380

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  200 bits (510), Expect = 3e-61
 Identities = 97/390 (24%), Positives = 182/390 (46%), Gaps = 16/390 (4%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA 66
           L+ R        + ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG 
Sbjct: 2   LSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGP 60

Query: 67  DEGLPELRDALVKKLNQENKLYKSS---VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           + GL ELR+A+ +KL ++N +       +MV  GANQAF+  +      G+ V++  P +
Sbjct: 61  NIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAF 120

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            +   +  + G   + V          + D L+K +      + + + +P NP+G  + +
Sbjct: 121 VSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYV--TDKTRALIINSPCNPTGAVLTK 178

Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMG 238
           + L+ I+D        ++ D  YE+F+YD  +H  +       +  + +  FSK + M G
Sbjct: 179 KDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTG 238

Query: 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298
           WR+G++A PS +     +        P+     +   AL   +   + V E  K+  R R
Sbjct: 239 WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKD-ERSWKAVEEMRKEYDRRR 297

Query: 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-- 356
           +++ + L+ +G   VK  +GA Y++ R+ +  L   +    +     V V+PG A G   
Sbjct: 298 KLVWKRLNEMGLPTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAG 356

Query: 357 RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
            G++RIS+     +  + A DR+ R L+E 
Sbjct: 357 EGYVRISY-ATAYEKLEEAMDRMERVLKER 385

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  178 bits (453), Expect = 7e-53
 Identities = 93/396 (23%), Positives = 169/396 (42%), Gaps = 20/396 (5%)

Query: 6   KLAKRALETE---MPIMVQIQELVRGAKNAVSLAQG---VVYWQPPKMAMEKVKELVWDP 59
           + +KRAL  E     +++  +EL +     + L  G      +QPP+   E   + + + 
Sbjct: 3   RASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG 62

Query: 60  SISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVV 117
             + YG  EGLPELR A+V++  ++N +      V VTA   +A   I   L D GD ++
Sbjct: 63  -HNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEIL 121

Query: 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177
           +  P Y       +  G   +       +   PD D + K +  +   K ++V+NP NP+
Sbjct: 122 VPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRT--KAIAVINPNNPT 179

Query: 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAY 234
           G    ++ L+ I ++       ++ D  Y+   Y+G         +   V+ +   SK Y
Sbjct: 180 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY 239

Query: 235 GMMGWRV--GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVK 292
              GWR+   Y   P        + +     I +C +  +Q  A+  L    +++ E +K
Sbjct: 240 FATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMK 299

Query: 293 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPG 351
            L   R+ I + L+ +   +    +GA Y++ ++      +D E V  + H   V+ + G
Sbjct: 300 KLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHG 359

Query: 352 GACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385
              G    GH R  F     +  + A DR  + ++E
Sbjct: 360 SGFGEYGAGHFRAVF-LPPIEILEEAMDRFEKFMKE 394

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  146 bits (368), Expect = 8e-41
 Identities = 90/388 (23%), Positives = 164/388 (42%), Gaps = 24/388 (6%)

Query: 7   LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS 62
           +++R  E      M +  + + L++  ++ ++L  G   +  P+  +E+    +      
Sbjct: 1   VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFL-QKGEV 59

Query: 63  KYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           KY    G+ ELR+ + K++ +     +    V+VT GA QA  N  + L D GD V++F+
Sbjct: 60  KYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS 119

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           P + +      + G T  +V    SK   P  + +E         K V + +P NP+G  
Sbjct: 120 PVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG--LLVGKTKAVLINSPNNPTGVV 177

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----DHVVNLFSFSKAYGM 236
                L+ +  L K    +++ D  Y+  +Y       ++     D +V +  FSK++ M
Sbjct: 178 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSM 237

Query: 237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 296
            GWRVGY+    +V    ++            S I+      +L+      +  V+    
Sbjct: 238 TGWRVGYLISSEKVATAVSK------IQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE 291

Query: 297 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC 356
            +  + E L  +G   V+  EGA YL+ ++     DD +    L     V ++PG A   
Sbjct: 292 RKNFVVERLKKMGVKFVEP-EGAFYLFFKVRG---DDVKFCERLLEEKKVALVPGSAFLK 347

Query: 357 RGHLRISFGGLVEDDCKAAADRLRRGLE 384
            G +R+SF     +    A DR+   L 
Sbjct: 348 PGFVRLSF-ATSIERLTEALDRIEDFLN 374

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  135 bits (341), Expect = 2e-36
 Identities = 52/348 (14%), Positives = 90/348 (25%), Gaps = 59/348 (16%)

Query: 71  PELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTL--------CDAGDSVVMFA 120
            EL   + +              ++   G  Q    +V++L              VV  A
Sbjct: 103 FELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHA 162

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           P+Y       +       +           +A          P   +  V +P NP G  
Sbjct: 163 PFYPVFREQTKYFDKKGYVW--------AGNAANYVNVS--NPEQYIEMVTSPNNPEGLL 212

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 240
               +           G   + D  Y +  Y   K+     D  + LF+ SK  G  G R
Sbjct: 213 RHAVIK----------GCKSIYDMVYYWPHYTPIKYKA---DEDILLFTMSKFTGHSGSR 259

Query: 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-----------EWVTE 289
            G+     E       LL             +Q  +L  L+              +  T 
Sbjct: 260 FGWALIKDES--VYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTF 317

Query: 290 RVKDLVRNREIIREALSPLGEGAVK---GGEGAIYLWARLP--------EKHLDDFEVVR 338
             K L      I   L      + +     E   Y     P        +   ++ +   
Sbjct: 318 GFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCY 377

Query: 339 WLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE 385
                  +    G        ++R+S     +DD       L+  ++ 
Sbjct: 378 QTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVKA 424

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score =  133 bits (334), Expect = 2e-35
 Identities = 64/355 (18%), Positives = 123/355 (34%), Gaps = 32/355 (9%)

Query: 61  ISKYGADEGLPELRDALVKKLNQ----ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV 116
           ++ +    GLP  + A+V  + +    +     + +++TAGA  A    +  L D G++V
Sbjct: 77  LALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAV 136

Query: 117 VMFAPYYFNSYMSFQMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTPKLVSVVNP 173
           ++  PYY       +      I+   C+S     +   A         K   ++  V+  
Sbjct: 137 LIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVT 196

Query: 174 --GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--------------C 217
              NP GT +    L  +    +  G  L+ D  Y    +                    
Sbjct: 197 NPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDEN 256

Query: 218 CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL 277
                 V  ++S SK  G+ G+RVG I    ++             +    +       L
Sbjct: 257 SEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVA-AATKMSSFGLVSSQTQHLLSAML 315

Query: 278 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-----KHLD 332
              +    ++ E  K L + ++ +   L   G   +  G   ++ W  +           
Sbjct: 316 SDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLN-GNAGLFCWVDMRHLLRSNTFEA 374

Query: 333 DFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385
           + E+ + + +   + + PG +C C   G  R+ F  L E     A  RL+  + E
Sbjct: 375 EMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGE 429

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score =  129 bits (323), Expect = 2e-34
 Identities = 88/382 (23%), Positives = 142/382 (37%), Gaps = 23/382 (6%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           +L  R    +  I  ++  L +    AV+L QG     PP   +E V+  +      +Y 
Sbjct: 2   RLHPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGRQD--QYA 58

Query: 66  ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
              GLP LR+AL ++      +   SV+VT+GA +A   ++ +L   GD VV+  P++  
Sbjct: 59  PPAGLPALREALAEE----FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDV 114

Query: 126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185
                 + G     +            D         P  + + +  P NP+G    ER 
Sbjct: 115 YLPDAFLAG-AKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERE 173

Query: 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGY 243
           L+ I+ L +A   +L+ D  Y+   Y  R         +    + S  K     G+RVG+
Sbjct: 174 LEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGW 233

Query: 244 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303
           I  P E       + +                AL   +    +   R     R R+++  
Sbjct: 234 IVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREG-YRRRRDLLAG 292

Query: 304 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGH 359
            L  +G       EG  +L A LP    D F     L     V +IP  A       +  
Sbjct: 293 GLRAMGLRVYV-PEGTYFLMAELP--GWDAFR----LVEEARVALIPASAFYLEDPPKDL 345

Query: 360 LRISFGGLVEDDCKAAADRLRR 381
            R +F    E++   A +RL R
Sbjct: 346 FRFAFCK-TEEELHLALERLGR 366

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  125 bits (315), Expect = 6e-33
 Identities = 59/395 (14%), Positives = 114/395 (28%), Gaps = 53/395 (13%)

Query: 31  NAVSLAQGVVY---WQPPKM-AMEKVKELVW--DPSISKYGADEGLPELRDALVKKLNQE 84
             V+L  G       QP  +  + KV++ +        +Y    GL E R    +    +
Sbjct: 31  RKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGD 90

Query: 85  NKLYK-----------SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT 133
           +                         +          +    V + +P + N    F   
Sbjct: 91  DSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTA 150

Query: 134 GVTHILVGPC-SSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           G   I       ++    D       LE        V      NP+GT       K+I+ 
Sbjct: 151 GFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAS 210

Query: 192 LCKAAGSWLVVDNTYEYFMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYI 244
           + K    +   D+ Y+ F     +           EG  +    SFSK +G+   RVG +
Sbjct: 211 VMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNL 270

Query: 245 AYPS----EVEGFATQLLKVQDNIPICASIISQHLALY------SLQTGPEWVTERVKDL 294
              +     +    +Q+ K+              +                 V      +
Sbjct: 271 TVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRI 330

Query: 295 VRNREIIREALSPLGEGAVKG---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
           +  R  +R  L  L           +  ++ +  L        + V +L ++  + ++P 
Sbjct: 331 LSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNP------KQVEYLINQKHIYLLPS 384

Query: 352 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           G        RI+  GL   +    A  +   + ++
Sbjct: 385 G--------RINMCGLTTKNLDYVATSIHEAVTKI 411

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score =  125 bits (314), Expect = 9e-33
 Identities = 62/356 (17%), Positives = 118/356 (33%), Gaps = 30/356 (8%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGD 114
            +I+ +    GLPE R A+ K + +      +     V++  GA  A   I+  L D GD
Sbjct: 74  KAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGD 133

Query: 115 SVVMFAPYYFNSYMSFQMTG---VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171
           + ++ +PYY       +      +  I     ++  +   A         K   K+  ++
Sbjct: 134 AFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193

Query: 172 NPGNPSGTYIPERLL--KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---------- 219
                +           K +          LV D  Y   ++D  +   +          
Sbjct: 194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMT 253

Query: 220 --EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL 277
               D V  ++S SK  G+ G+RVG I Y    +            +    +       L
Sbjct: 254 YCNKDLVHIVYSLSKDMGLPGFRVGII-YSFNDDVVNCARKMSSFGLVSTQTQYFLAAML 312

Query: 278 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-----KHLD 332
              +    ++ E    L +  +     L  +G   +K     ++ W  L           
Sbjct: 313 SDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLK-NNAGLFCWMDLRPLLRESTFDS 371

Query: 333 DFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           +  + R + +   + V PG +  C+  G  R+ F  + +     A  R+RR +   
Sbjct: 372 EMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score =  123 bits (309), Expect = 3e-32
 Identities = 74/386 (19%), Positives = 143/386 (37%), Gaps = 22/386 (5%)

Query: 22  IQELVRGA--KNAVSLAQGV--VYWQPPKMAMEKVKELVWD--PSISKYGADEGLPELRD 75
           ++EL++     + +SLA G+      P +   +   E++ +      +YG  +G   LR 
Sbjct: 19  VRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRL 78

Query: 76  ALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT 133
           AL + + +     + K  +M  AG+ QA   I     + GD +V+ AP Y  +  +F+  
Sbjct: 79  ALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYY 138

Query: 134 G--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
                 I +     +    +    E   + K    + +V    NP+G  +     K++ +
Sbjct: 139 DPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLE 198

Query: 192 LCKAAGSWLVVDNTYEYFMYDGRKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248
           L       +V D  Y    Y G         +    V            G+R+G++A   
Sbjct: 199 LANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHP 258

Query: 249 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308
            +        +  D                      E + + ++     R+ + EAL   
Sbjct: 259 HLIRKMEIAKQSIDLCTNTFGQAIAW-KYVENGYLDEHIPKIIEFYKPRRDAMLEALEEY 317

Query: 309 GEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRI 362
               V+    EG +++   LPE    D +++   A   GV  +PG A       +  +R+
Sbjct: 318 MPEGVEWTKPEGGMFVRVTLPEG--IDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRL 375

Query: 363 SFGGLVEDDCKAAADRLRRGLEELVK 388
           +F  + E+  +    RL   ++E +K
Sbjct: 376 NFTYVPEETIREGVRRLAETIKEEMK 401

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 4e-32
 Identities = 77/418 (18%), Positives = 146/418 (34%), Gaps = 41/418 (9%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYG 65
            A+R    +    V+  +L     + V+L QG   + PP  A+E  +  V  D  +++Y 
Sbjct: 3   QARRLDGIDYNPWVEFVKLASE-HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYT 61

Query: 66  ADEGLPELRDALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122
              G P L   L     +          +V+VT G   A       L D GD V++  P+
Sbjct: 62  KTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPF 121

Query: 123 YFNSYMSFQMTGVT----HILVGPCSSKTLHPDADW----LEKTLETKPTPKLVSVVNPG 174
           +        M G       +  GP  +  L   ++W    +E   +     K + +  P 
Sbjct: 122 FDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPN 181

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFS 229
           NP G       L+ ++ LC+      + D  Y++ +YDG +H  +       +  + + S
Sbjct: 182 NPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGS 241

Query: 230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE 289
             K +   GW+VG++  P  +      + +         S  +   +    Q      + 
Sbjct: 242 AGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSS 301

Query: 290 RVKDLVRNREIIREALSPLGEGA---VKGGEGAIYLWARLPE------------KHLDDF 334
                 +  +  R+ +    +         +G+ +L   + +                D 
Sbjct: 302 YFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDR 361

Query: 335 EVVRWLAHRHGVVVIPGGACG-------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385
             V+W+    G+V IP               ++R  F    E   +A  ++LR+   E
Sbjct: 362 RFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCF-VKDEATLQAMDEKLRKWKVE 418

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  122 bits (307), Expect = 6e-32
 Identities = 51/383 (13%), Positives = 112/383 (29%), Gaps = 47/383 (12%)

Query: 31  NAVSLAQGVVY---WQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85
             ++L  GV      + P +    +  + L+ + +   Y   +G+PE      + L  + 
Sbjct: 27  GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKG 86

Query: 86  KLYKS------SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHIL 139
               +      +               L    +   V +  P + N    F   G+    
Sbjct: 87  SALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVRE 146

Query: 140 VGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
                ++         +    E +    ++      NP+G        + ++ L    G 
Sbjct: 147 YAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGW 206

Query: 199 WLVVDNTYEYFMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS---- 248
             + D  Y+ F     +              ++   S+SK +G+   RVG     +    
Sbjct: 207 LPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSE 266

Query: 249 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREIIR 302
            V+   +Q+                 +    L          + +T+  + + R R++  
Sbjct: 267 TVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFV 326

Query: 303 EALSPLGEGA----VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG 358
             L   G       +    G  + ++ L +      E V  L    GV  +  G      
Sbjct: 327 NTLQEKGANRDFSFIIKQNGM-FSFSGLTK------EQVLRLREEFGVYAVASG------ 373

Query: 359 HLRISFGGLVEDDCKAAADRLRR 381
             R++  G+  D+     + +  
Sbjct: 374 --RVNVAGMTPDNMAPLCEAIVA 394

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  122 bits (305), Expect = 1e-31
 Identities = 56/384 (14%), Positives = 106/384 (27%), Gaps = 47/384 (12%)

Query: 31  NAVSLAQGVVY---WQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85
             ++L  G       +P  +    +    +       +Y    GL +   A  +    EN
Sbjct: 29  KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGEN 88

Query: 86  KLYKSS-------VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
                S        +   G+ +   N +         V +  P + N    F+  G+   
Sbjct: 89  SEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQ 148

Query: 139 LVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
                  KT   D     + + +      ++      NP+G    +   K ++ + K   
Sbjct: 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRN 208

Query: 198 SWLVVDNTYEYFMYDGRKH-------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
                D  Y+ F                 +G  VV   S++K  G+ G R G        
Sbjct: 209 LLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRD 268

Query: 251 EG----FATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREI 300
                   +QL  +   +     +    +A   L T          V      ++  R  
Sbjct: 269 AEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQ 328

Query: 301 IREALSPLGEG---AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR 357
           +   L   G          +  ++ +  L        E V  L     + +   G     
Sbjct: 329 LVSNLKKEGSSHNWQHITDQIGMFCFTGLKP------EQVERLTKEFSIYMTKDG----- 377

Query: 358 GHLRISFGGLVEDDCKAAADRLRR 381
              RIS  G+   +    A  + +
Sbjct: 378 ---RISVAGVASSNVGYLAHAIHQ 398

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  121 bits (303), Expect = 3e-31
 Identities = 60/391 (15%), Positives = 107/391 (27%), Gaps = 54/391 (13%)

Query: 31  NAVSLAQGVVY-WQPPKMAMEKVKE----LVWDPSISK-YGADEGLPELRDALVKKLNQE 84
             V L  G           +  VK     +  D S +  Y    GLP L     K +   
Sbjct: 30  TKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGT 89

Query: 85  -NKLYKSSVMVT-----AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV-TH 137
            +   +   +++                 +       V +  P + N    F+  G+ T 
Sbjct: 90  QSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTA 149

Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
                 +         +L    +       V      NP+G         +I D   +  
Sbjct: 150 TYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKN 209

Query: 198 SWLVVDNTYEYFMYDGRKHCCV----------EGDHVVNLFSFSKAYGMMGWRVGYIAYP 247
              + D  Y+ F                        V    SF+K  GM G RVG     
Sbjct: 210 HIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLA 269

Query: 248 SEV--------EGFATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKD 293
                          +QL K+  +           +    L+T        + +      
Sbjct: 270 LTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSR 329

Query: 294 LVRNREIIREALSPLGEG---AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350
           + + R  +R+ L  LG          +  ++ +  L        ++V+ L   H V ++ 
Sbjct: 330 ITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP------QMVKRLEETHAVYLVA 383

Query: 351 GGACGCRGHLRISFGGLVEDDCKAAADRLRR 381
            G        R S  GL + + +  A  +  
Sbjct: 384 SG--------RASIAGLNQGNVEYVAKAIDE 406

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  120 bits (302), Expect = 3e-31
 Identities = 61/385 (15%), Positives = 109/385 (28%), Gaps = 50/385 (12%)

Query: 31  NAVSLAQGVVY---WQPPKMAMEKVKE----LVWDPSISK-YGADEGLPELRDALVKKLN 82
           + V+L+ G+ Y      P   ++ V E    L   P  +  Y   EGL   R A+   L 
Sbjct: 27  DKVNLSIGLYYNEDGIIP--QLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF 84

Query: 83  QEN--KLYKSSVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVT 136
             +   L +  V        +    V             V +  P + N    F   G  
Sbjct: 85  GADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFE 144

Query: 137 HILV-GPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
                    +       D L           ++      NP+G  +       + ++ KA
Sbjct: 145 VSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKA 204

Query: 196 AGSWLVVDNTYEYFMYDGRKHC------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
                 +D  Y+ F     +           G   +   SFSK + + G RVG ++   E
Sbjct: 205 RELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCE 264

Query: 250 VEGFATQLLKVQDNIP---ICASIISQHLALYSLQTGPEWVTE-------RVKDLVRNRE 299
               A ++L            +        + ++                    ++  R+
Sbjct: 265 DAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQ 324

Query: 300 IIREALSPLG-EGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC 356
            + + LS    E        +  ++ +  L          V  L    GV +I  G    
Sbjct: 325 ELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA------AQVDRLREEFGVYLIASG---- 374

Query: 357 RGHLRISFGGLVEDDCKAAADRLRR 381
               R+   GL   + +  A     
Sbjct: 375 ----RMCVAGLNTANVQRVAKAFAA 395

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score =  117 bits (293), Expect = 4e-30
 Identities = 91/377 (24%), Positives = 150/377 (39%), Gaps = 23/377 (6%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  Q+  L +    A++L+QG   +  P+   E++   V     ++Y    G+  LR+A+
Sbjct: 15  IFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAI 72

Query: 78  VKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
            +K  +         S + VTAGA +A    +  L   GD V+ F P Y +   +  +  
Sbjct: 73  AQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIAL-- 130

Query: 135 VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194
            +  +V   + +  H   DW E         +LV +  P NPS T   +     +     
Sbjct: 131 -SGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIA 189

Query: 195 AAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
               +++ D  YE+  +  + H          +  V + SF K Y M GW+VGY   P+ 
Sbjct: 190 GHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP 249

Query: 250 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
               + ++ KV   +    +  +Q      L+  PE          + R+I+  AL+   
Sbjct: 250 ---ISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESR 306

Query: 310 EGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISF 364
              +   EG  +L         LDD E  +WL   HGV  IP             +R+ F
Sbjct: 307 -LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF 365

Query: 365 GGLVEDDCKAAADRLRR 381
               E    AAA+RLR+
Sbjct: 366 -AKKESTLLAAAERLRQ 381

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score =  117 bits (294), Expect = 4e-30
 Identities = 72/413 (17%), Positives = 141/413 (34%), Gaps = 39/413 (9%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV--WDPSISK 63
            L KR   +   + V+  +L       ++L QG   +  PK A+  +       DP  ++
Sbjct: 3   DLPKRYQGSTKSVWVEYIQLAAQ-YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQ 61

Query: 64  YGADEGLPELRDALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           Y    G P L  AL K  +Q         + V+VT GA +A    +    D GD V++  
Sbjct: 62  YTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIE 121

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADW-----LEKTLETKPTPKLVSVVNPGN 175
           P++       +  G     +    +KT    +         +          + ++N  +
Sbjct: 122 PFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPH 181

Query: 176 PSGTYIPER-LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFS 229
                + +R  L+ +++LCK      V D  YE+ +++  +H  +       +  + + S
Sbjct: 182 NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGS 241

Query: 230 FSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW 286
             K + + GW++G+   P  +        Q        PI  +I             PE 
Sbjct: 242 AGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPEC 301

Query: 287 VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-----------KHLDDFE 335
               +   +  +     +            +G  ++ A                   D+ 
Sbjct: 302 YFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYR 361

Query: 336 VVRWLAHRHGVVVIPGGACGC-------RGHLRISFGGLVEDDCKAAADRLRR 381
             +W+    G+  IP  A             +R  F    +++ + AA+ LR+
Sbjct: 362 FTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-KDENLQKAAEILRK 413

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  109 bits (272), Expect = 4e-27
 Identities = 73/408 (17%), Positives = 141/408 (34%), Gaps = 32/408 (7%)

Query: 6   KLAKRALETEMPI--MVQIQELVRGAKNAVSLAQGVVYWQPP----KMAMEKVKELVWDP 59
            ++  A     PI  +    +     K  + L+ G              ++K+KE +   
Sbjct: 4   SMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQ 63

Query: 60  SISKYGADEGLPELRDALVKKLNQENKLY--------KSSVMVTAGANQAFVNIVLTLCD 111
             + Y    G PE R+A+                   K +V++ +G +   +  +  +CD
Sbjct: 64  ECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD 123

Query: 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171
           AGD  ++  P + +     +  G+               D D + +        KL+ V 
Sbjct: 124 AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRL--KDDKTKLLIVT 181

Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--------EGDH 223
           NP NP G+    + ++ I  L +     L  D  Y   ++ G+                 
Sbjct: 182 NPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVP 241

Query: 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT---QLLKVQDNIPICASIISQHLALYSL 280
            V L   +K   + GWR+G++ Y        +    L +V   +    +++   L    L
Sbjct: 242 RVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALL 301

Query: 281 QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL----DDFEV 336
            T  E + + V  +  +   +   +      A     GA+YL +R+  +       D E 
Sbjct: 302 NTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEF 361

Query: 337 VRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384
              L     V V+PG      G  R++      +  + A +R++   +
Sbjct: 362 FEKLLEEENVQVLPGTIFHAPGFTRLTT-TRPVEVYREAVERIKAFCQ 408

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  107 bits (268), Expect = 1e-26
 Identities = 49/379 (12%), Positives = 105/379 (27%), Gaps = 42/379 (11%)

Query: 31  NAVSLAQGVVY---WQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85
             + L  GV        P M       + ++   +   Y    G PE + A+ + +  + 
Sbjct: 27  GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDG 86

Query: 86  KLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
                  +   V           +  + +    V +  P + N        G+       
Sbjct: 87  LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRY 146

Query: 143 CSSKTLHPDADWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
             ++T   D + ++  L        ++      NP+G  +       I+ + +  G+  +
Sbjct: 147 FDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPL 206

Query: 202 VDNTYEYFMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRV----GYIAYPSEVE 251
           +D  Y+ F     +              V+   S SK +G+   R        A  +  E
Sbjct: 207 IDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRE 266

Query: 252 GFATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREIIREAL 305
                +  +              +    L T          +      ++R RE +   L
Sbjct: 267 LAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGEL 326

Query: 306 SPLGEG---AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 362
             L              ++             E V+ +    G+ ++           RI
Sbjct: 327 RDLSGSDRFGFVAEHRGMFSRLGATP------EQVKRIKEEFGIYMVGDS--------RI 372

Query: 363 SFGGLVEDDCKAAADRLRR 381
           +  GL ++     A  +  
Sbjct: 373 NIAGLNDNTIPILARAIIE 391

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score =  106 bits (265), Expect = 3e-26
 Identities = 86/397 (21%), Positives = 148/397 (37%), Gaps = 29/397 (7%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNA----VSLAQGVVYWQPPKMAMEKVKELVWDPSIS 62
            + R L TE   + ++      AK        L  G    + P++  E++ E    P + 
Sbjct: 1   FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYEN--KPEVV 58

Query: 63  KYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
            Y    G+ ELR+A      +  ++     +V+VT G ++A +     + + GD +++  
Sbjct: 59  YYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLE 118

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           P+Y N     ++ GV  I   P + +     A             K + + NP NP+G  
Sbjct: 119 PFYANYNAFAKIAGVKLI---PVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVV 175

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTY--EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238
             +  ++ + ++ +  G +L+VD  Y    F  +      +E D VV + S SK +   G
Sbjct: 176 YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACG 235

Query: 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298
            RVG +   +E        L      P     I     L    +  ++V E  ++ V   
Sbjct: 236 ARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETV 295

Query: 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH-----RHGVVVIPGGA 353
               E              GA Y+ A LP +  D  E  RW+           +V P   
Sbjct: 296 LKKLEEHGLK---RFTKPSGAFYITAELPVE--DAEEFARWMLTDFNMDGETTMVAPLRG 350

Query: 354 CGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEE 385
                   +  +RI+   L +D    A D L  GL+ 
Sbjct: 351 FYLTPGLGKKEIRIAC-VLEKDLLSRAIDVLMEGLKM 386

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score =  102 bits (253), Expect = 1e-24
 Identities = 56/374 (14%), Positives = 117/374 (31%), Gaps = 14/374 (3%)

Query: 23  QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82
            +        V L+   + ++ P   +E +K+ + +      G      E +  + K + 
Sbjct: 24  SQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDET---VLGYTGPTEEYKKTVKKWMK 80

Query: 83  QENKLYKSSVM--VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILV 140
             ++    +     TAG   A  N V      GD V++  P Y+  +M+ +      I  
Sbjct: 81  DRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC 140

Query: 141 GPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200
                   +       + L      K +   +P NP G    +  L++I D+   +   L
Sbjct: 141 ELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLML 200

Query: 201 VVDNTYEYFMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254
             D  +   +  G +H           D  +   + SK + + G  +  I   +      
Sbjct: 201 WSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRER 260

Query: 255 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314
               +   +     ++  +   +   + G              R +         E    
Sbjct: 261 FTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320

Query: 315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDC 372
             EG    W       +D   +  ++ H+  +    G   G    G  RI+         
Sbjct: 321 LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINL-AAPSSVI 379

Query: 373 KAAADRLRRGLEEL 386
           + + +RL + L++L
Sbjct: 380 QESLERLNKALKDL 393

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score =  101 bits (251), Expect = 3e-24
 Identities = 74/404 (18%), Positives = 142/404 (35%), Gaps = 24/404 (5%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWD---PSI 61
           K++K     +  I+ +I +     K+A+S   GV   +  P+  + ++ + + +      
Sbjct: 15  KISKIGQNMKSSIIREILKFAAD-KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYT 73

Query: 62  SKYGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
            +Y   EG P L+  ++K L +   +    + +++ T G+ QA   I     D     V+
Sbjct: 74  LQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVL 133

Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL----EKTLETKPTPKLVSVVNPG 174
             P Y  +  +F+      ++V            +      +K  + K    +  V N  
Sbjct: 134 DDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFH 193

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---EGDHVVNLFSFS 231
           NP+G        K + ++ +    ++V D+ Y    Y+G     +    G   V L +  
Sbjct: 194 NPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTF 253

Query: 232 KAYGMMGWRVGYIAYPSE---VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 288
                 G R+G +A   E       A Q   +                   L+     + 
Sbjct: 254 SKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIE 313

Query: 289 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348
              +        + E  S +        EG +++W  LPE   D +E+  +   R  V  
Sbjct: 314 LYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE-GFDTWEMFEYAK-RKKVFY 371

Query: 349 IPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
           +PG            +R+SF    ++       RLR  + E  K
Sbjct: 372 VPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 415

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 93.0 bits (229), Expect = 1e-21
 Identities = 55/351 (15%), Positives = 120/351 (34%), Gaps = 11/351 (3%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQA 101
                +E + + +    +  Y   +   E   A+    + ++       +V+        
Sbjct: 13  TAPCIIEALNQRL-MHGVFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM 70

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161
              ++    + G+ VV+  P Y   Y + +    T + V                + +  
Sbjct: 71  VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA 130

Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CC 218
           KP  K++ + +P NP+G       L+ ++DLC+  G  ++ D  +   ++  + H     
Sbjct: 131 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN 190

Query: 219 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALY 278
           V       L S SK++ +      Y    +     A        +     S+++    + 
Sbjct: 191 VARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIA 250

Query: 279 SLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDFEVV 337
           + Q G  W+      L  N   I + ++           +     W  L   ++DD  + 
Sbjct: 251 AYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ 310

Query: 338 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
           + L  +  V ++PG   G   RG +R++  G      +     L   +  +
Sbjct: 311 KALIEQEKVAIMPGYTYGEEGRGFVRLNA-GCPRSKLEKGVAGLINAIRAV 360

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 83.8 bits (206), Expect = 2e-18
 Identities = 40/343 (11%), Positives = 96/343 (27%), Gaps = 41/343 (11%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           +  G+     ++ +  +K L  +        +     + A +  +L L        +   
Sbjct: 44  TYIGSSYFAEKVNEYGLKHLGGDEN---DKCVGFNRTSSAILATILALKPKKVIHYLPEL 100

Query: 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY 180
               S                      + ++D + + L        ++   +  +     
Sbjct: 101 PGHPSIER-----------SCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIE 149

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 240
           +     K++ +  K   + + VD+     +               +L   S    M G R
Sbjct: 150 LEN--FKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KLGADLVVTSTDKLMEGPR 206

Query: 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300
            G +A     +    ++        + A          +L+    +  ER++      + 
Sbjct: 207 GGLLAGK---KELVDKIYIEGTKFGLEAQPPLLAGIYRALKN---FNLERIRKAFERAKN 260

Query: 301 IREALSPLGEGAVKGGEGAIYLW-ARLPEKHL-------------DDFEVVRWLAHRHGV 346
              +        +K  +  I +   R P   +                E+   L   +G+
Sbjct: 261 FDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGI 320

Query: 347 VVIPG-GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
           + I   G  G    LRI       D  +   + + + + E +K
Sbjct: 321 ITITVAGMPGASKSLRIDLT--SRDAERIDDNYIIKAIVESIK 361

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score = 74.8 bits (182), Expect = 2e-15
 Identities = 52/314 (16%), Positives = 105/314 (33%), Gaps = 18/314 (5%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           +     + +   +       +    V+V+ GA++    ++   C+ G   +++ P  +  
Sbjct: 55  ECQPKAVIENYAQYAG----VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGM 110

Query: 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
           Y     T        P             +K    K     V V +P NP+G  I  +  
Sbjct: 111 YSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKV----VYVCSPNNPTGQLINPQDF 166

Query: 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 246
           + + +L +     +  +   E+           E  H+  L + SKA+ + G R G+   
Sbjct: 167 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 226

Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
             EV     +++         A I +Q L+   +    E V + + +       ++E   
Sbjct: 227 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKE--- 283

Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366
            +            Y+ AR          V + L  +  ++          G LRI+ G 
Sbjct: 284 -IPCVEQVFDSETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG- 337

Query: 367 LVEDDCKAAADRLR 380
              ++ +   D LR
Sbjct: 338 -TREESQRVIDALR 350

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.2 bits (144), Expect = 1e-10
 Identities = 45/329 (13%), Positives = 98/329 (29%), Gaps = 22/329 (6%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           YG D  + EL     +   +E      + +            ++     GD V++ A  +
Sbjct: 30  YGEDPTINELERLAAETFGKE------AALFVPSGTMGNQVSIMAHTQRGDEVILEADSH 83

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGT 179
              Y    M  ++ ++  P   K    D D + K +       P   L+++ N  N SG 
Sbjct: 84  IFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGG 143

Query: 180 YIPER-LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238
            +     +K I  + K  G  + +D    +           E     +   F  + G+  
Sbjct: 144 RVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCA 203

Query: 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298
                +    +    A +  K+       A +++    +   +          K+   N 
Sbjct: 204 PVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRL-----KEDHENA 258

Query: 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG 358
             +   L  +G            +  R     ++    +  L    GV+           
Sbjct: 259 RFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALR-NSGVLANAVS----DT 313

Query: 359 HLRISFG-GLVEDDCKAAADRLRRGLEEL 386
            +R+     +  +D + A +   +   + 
Sbjct: 314 EIRLVTHKDVSRNDIEEALNIFEKLFRKF 342

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score = 59.4 bits (142), Expect = 2e-10
 Identities = 49/362 (13%), Positives = 95/362 (26%), Gaps = 24/362 (6%)

Query: 22  IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81
              L       +  +  +     P      + + +    I +Y  D     L  AL +  
Sbjct: 14  ATVLGISPDQLLDFSANINPLGMPVSVKRALIDNL--DCIERY-PDADYFHLHQALARHH 70

Query: 82  NQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
                       + AG  +      +         ++  P +     +   +G       
Sbjct: 71  QVPAS------WILAGNGETESIFTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWS 124

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
              +         LE      P    + +  P NP+G      LL+ I+D CK+    L+
Sbjct: 125 LREADGWQLTDAILEAL---TPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLI 181

Query: 202 VDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 261
           +D  +  F+           D+       S         +      +  +    ++ + Q
Sbjct: 182 LDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQ 241

Query: 262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321
               + A                 W       L        +AL  L    V  G  A Y
Sbjct: 242 MPWSVNALAALAG---EVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPG-RANY 297

Query: 322 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRL 379
           L  R      +D ++ R L     +++            + R++         +     L
Sbjct: 298 LLLRCER---EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAAL 351

Query: 380 RR 381
           R 
Sbjct: 352 RN 353

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 54.9 bits (131), Expect = 8e-09
 Identities = 50/373 (13%), Positives = 107/373 (28%), Gaps = 53/373 (14%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA---GDSVVMFA 120
           Y       +L+D   +  N +  +         GA      ++L          + V  +
Sbjct: 71  YAGSRNYYDLKDKAKELFNYDYIIPAHQ---GRGAENILFPVLLKYKQKEGKAKNPVFIS 127

Query: 121 PYYFNSY----MSFQMTGVTHILVGPCSSKTLHP-----DADWLEKTLETKPTPKLVSVV 171
            ++F++            +  +      S+T        D   L++ +       +V++V
Sbjct: 128 NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIV 187

Query: 172 NPGNP---SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--------- 219
           +        G  +    LK + ++ K  G ++V+D+          K             
Sbjct: 188 STVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKE 247

Query: 220 ---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------DNIPICASI 270
              +     +  + S     +    G +A     E F     +            +    
Sbjct: 248 VIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRD 307

Query: 271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL--GEGAVKGGEGAIYLWARLPE 328
           ++  +      T  E++  R+  +    + +REA  P+    G          L  ++P 
Sbjct: 308 MAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPG 367

Query: 329 KHLDDFEVVRWLAHRHGVVVIPGGAC-------------GCRGHLRISFGGLV--EDDCK 373
                  V+  L    GV  +  G+                   +R++    V   D   
Sbjct: 368 DQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMD 427

Query: 374 AAADRLRRGLEEL 386
             AD L    E+ 
Sbjct: 428 YIADALIGLKEKF 440

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score = 52.6 bits (125), Expect = 4e-08
 Identities = 28/308 (9%), Positives = 85/308 (27%), Gaps = 19/308 (6%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY--YFNSYMSFQMTGVTHILVGPC-SS 145
             ++        +    +        S V+  PY  + +   +    G+   LV      
Sbjct: 130 VHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDG 189

Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
             ++   + +E  ++ +        V              +  I+ +C+      +++  
Sbjct: 190 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGA 249

Query: 206 YEYFMYDGRKHCCVEGDHVVNLFSFS---KAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 262
           Y        +       + V+    S        +G  + Y      ++  +        
Sbjct: 250 YAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRAS 309

Query: 263 NIPICASIISQHLALYSLQTGP--------EWVTERVKDLVRNREIIREALSPLGEGAVK 314
             P+  +++S                    + + E + DL +        +       + 
Sbjct: 310 ATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCIS 369

Query: 315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-GLVEDDCK 373
                + + A+L    +     ++   H  G   +         ++ ++   G+  +D  
Sbjct: 370 VNSDPVEIAAKLYNLRVTGPRGIKKTDH-FGNCYLGTYTH---DYIVMNAAIGVRTEDIV 425

Query: 374 AAADRLRR 381
            +  +L +
Sbjct: 426 NSVSKLEK 433

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score = 51.3 bits (121), Expect = 8e-08
 Identities = 47/364 (12%), Positives = 111/364 (30%), Gaps = 37/364 (10%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  +        ++   LA     +  P+  +++V   +   ++  Y  D    EL + +
Sbjct: 7   IAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKI 65

Query: 78  VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           +  L+ +                 F++        G   +++          F     + 
Sbjct: 66  LSYLDTD-----------------FLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSC 108

Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
             +   +      +    +     +       VV   NP+         + I  + K   
Sbjct: 109 YRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGA 168

Query: 198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257
              + +  YE+           + +++  + +FSKA+ +   RVGY+    +      ++
Sbjct: 169 FVALDEAYYEFHGES-YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRV 227

Query: 258 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 317
               +   +                  E   ER K +V  RE ++ AL  +G        
Sbjct: 228 RLPFNVSYVSQMFAKVA------LDHREIFEERTKFIVEERERMKSALREMGYRITDSR- 280

Query: 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAAD 377
              +++  + ++  +   ++  L     V V        R  +RI+ G    ++      
Sbjct: 281 -GNFVFVFMEKE--EKERLLEHLR-TKNVAVR-----SFREGVRITIG--KREENDMILR 329

Query: 378 RLRR 381
            L  
Sbjct: 330 ELEV 333

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 364

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.3 bits (113), Expect = 8e-07
 Identities = 41/321 (12%), Positives = 96/321 (29%), Gaps = 16/321 (4%)

Query: 72  ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
            + + L K L  +         VT GA +A   ++ +L      VVM    +++SY++ +
Sbjct: 51  FIHNQLPKFLGCD------VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAE 104

Query: 132 MTGVTHILVGPCSSKTLHPDADWLE---KTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188
             G+   LV            +      +  + +    L  +  P    G     +   +
Sbjct: 105 RAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVK---K 161

Query: 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248
           I+ +C      L+V+  Y                 V +      A G +G       +  
Sbjct: 162 IAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAE 221

Query: 249 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308
            V   + +    +  +  C +  +  + L +         +R  + V         +  L
Sbjct: 222 IVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKL 281

Query: 309 GEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH---LRISF 364
           G   +         ++      +    +        +  +          G     ++S 
Sbjct: 282 GIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLST 341

Query: 365 GGLVEDDCKAAADRLRRGLEE 385
            GL +++     +  +  +E+
Sbjct: 342 YGLSDEEVDYVLNAFKEIIEK 362

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.4 bits (114), Expect = 9e-07
 Identities = 42/363 (11%), Positives = 98/363 (26%), Gaps = 35/363 (9%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKLYKSS-----VMVTAGANQAFVNIVLTLCDAG 113
               K      L ++ ++LV  + +   ++  +      M T  +       +       
Sbjct: 81  AVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKA 140

Query: 114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVN 172
             ++       + + S    G   +++        L  D   +E  ++      ++ + +
Sbjct: 141 KYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHS 200

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFS 231
                        L+ ++ +C       VV+N Y                   ++ F  S
Sbjct: 201 T-TACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQS 259

Query: 232 --KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE 289
             K + +         +        +++   + +      ++   L+L       + + E
Sbjct: 260 LDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSL-GCSGYRKLLKE 318

Query: 290 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---PEKHLDDFEVVRWLAHRHGV 346
           R +  V     +++      E  ++     I L   L      H      +  +     V
Sbjct: 319 RKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQV 378

Query: 347 ----VVIPGGACGCRGHLRISFG-----------------GLVEDDCKAAADRLRRGLEE 385
                V  G      GH    F                  G+   D      RL + L  
Sbjct: 379 SGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNI 438

Query: 386 LVK 388
           + K
Sbjct: 439 VRK 441

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 46.8 bits (109), Expect = 2e-06
 Identities = 32/319 (10%), Positives = 77/319 (24%), Gaps = 11/319 (3%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           YG D    +    + + L + +         T     A    +        + +     +
Sbjct: 31  YGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTH 90

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
               +      V          +    ++   E   E    PKLV + N       Y  +
Sbjct: 91  ETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQ 150

Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY 243
            L    +   +      +        +        +     +    +  A    G     
Sbjct: 151 ELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEA 210

Query: 244 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303
           +   ++      + L  Q    +    +        ++    +         +   I++ 
Sbjct: 211 LIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGA--HSNKMAAILKA 268

Query: 304 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 363
            L   G            L+  L         ++  L +   +  +     G    +R+ 
Sbjct: 269 GLEACGIRLAWPSASNQ-LFPILEN------TMIAELNNDFDMYTVEPLKDG-TCIMRLC 320

Query: 364 FGGLV-EDDCKAAADRLRR 381
                 E +C    + L+R
Sbjct: 321 TSWATEEKECHRFVEVLKR 339

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 44.9 bits (105), Expect = 1e-05
 Identities = 38/394 (9%), Positives = 98/394 (24%), Gaps = 60/394 (15%)

Query: 48  AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG--ANQAFVNI 105
           A+ +  +         +        L +++          Y+ ++    G  A Q ++ +
Sbjct: 54  AVTQSMQAAMMRGDEAFSGSRSYYALAESVKNIFG-----YQYTIPTHQGRGAEQIYIPV 108

Query: 106 VLT------LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG--------PCSSKTLHPD 151
           ++         D    V     ++  +    Q+ G T   V                + D
Sbjct: 109 LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFD 168

Query: 152 ADWLEKTLETK---PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD----- 203
            + LE+ +E       P +V+ +   +  G  +    LK +  + K     +V+D     
Sbjct: 169 LEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFA 228

Query: 204 -----NTYEYFMYDGRKHCCVEGD--HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256
                       Y       +  +     ++ + S     M    G +    +       
Sbjct: 229 ENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYT 288

Query: 257 LLKVQ--------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308
             +              +    + +           +W+  R+  +    + + E     
Sbjct: 289 ECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVC 348

Query: 309 GEGAVKGGEGAIYLWA-RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----------- 356
            +                +P        +   L    G+  +  G+              
Sbjct: 349 QQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLP 408

Query: 357 --RGHLRISFG--GLVEDDCKAAADRLRRGLEEL 386
                LR++       +       +  +   E  
Sbjct: 409 CPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (100), Expect = 4e-05
 Identities = 45/365 (12%), Positives = 105/365 (28%), Gaps = 36/365 (9%)

Query: 50  EKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107
            ++        I     D  + + E+++ +       N     +++++   + A    ++
Sbjct: 32  PRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNP---LTLVISGSGHCALEAALV 88

Query: 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167
            + + GDS ++ A   +          +   +         H     +E+    +  P L
Sbjct: 89  NVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEE-GLAQHKPVL 147

Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227
           + + +  + +G   P   L    +LC      L+VD+           +   +G  ++  
Sbjct: 148 LFLTHGESSTGVLQP---LDGFGELCHRYKCLLLVDSVASLGGT--PLYMDRQGIDILYS 202

Query: 228 FSFSKAYGMMG----------------------WRVGYIAYPSEVEGFATQLLKVQDNIP 265
            S        G                           I + +   G   Q       IP
Sbjct: 203 GSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIP 262

Query: 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
           + +    +       + G E    + ++         +AL                    
Sbjct: 263 VISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVA 322

Query: 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLV--EDDCKAAADRLRRGL 383
           +P    D  ++V ++     + ++ G        LRI   G     ++     + LR  L
Sbjct: 323 VPA-GYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAAL 381

Query: 384 EELVK 388
           +   K
Sbjct: 382 QHCPK 386

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Length = 345

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 39/325 (12%), Positives = 85/325 (26%), Gaps = 22/325 (6%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAG--ANQAFVNIVLTLCDAGDSVVMFAP 121
           YG DE   +++    +   ++ ++     +V  G  AN   ++ +               
Sbjct: 34  YGTDELTAQVKRKFCEIFERDVEV----FLVPTGTAANALCLSAMTPPWGNIYCHPASHI 89

Query: 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPD----ADWLEKTLETKPTPKLVSVVNPGNPS 177
                      +    ++     +  L           +        P  VS+       
Sbjct: 90  NNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVG 149

Query: 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM 237
             Y     ++ I D+CK++   L +D +              E      + + S      
Sbjct: 150 SIYTL-DEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN 208

Query: 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 297
           G                    + +    + + +      + +  T   W+    K     
Sbjct: 209 GVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAA 268

Query: 298 REIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR 357
           + + +      G   + G E  I L+ RL    +D       L    G      G     
Sbjct: 269 QRLAQGLEGLGGVEVLGGTEANI-LFCRLDSAMID-----ALLKAGFGFYHDRWG----P 318

Query: 358 GHLRISFG-GLVEDDCKAAADRLRR 381
             +R         +D     +++R 
Sbjct: 319 NVVRFVTSFATTAEDVDHLLNQVRL 343

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 36/325 (11%), Positives = 79/325 (24%), Gaps = 49/325 (15%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           Y   E    L   + +    ++      ++ T     A   +       G  V     + 
Sbjct: 71  YAGSENFYHLEKTVKELFGFKH------IVPTHQGRGAENLLSQLAIKPGQYVAGNMYFT 124

Query: 124 FNSY----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL-VSVVN 172
              +             +       L  P        D + L   ++ K    +    + 
Sbjct: 125 TTRFHQEKNGATFVDIVRDEAHDASLNLP---FKGDIDLNKLATLIKEKGAENIAYICLA 181

Query: 173 PGNPSGTYIPERL--LKRISDLCKAAGSWLVVD------NTYEYFMYDGRKHCCVEGDHV 224
                    P  +  ++ + ++    G  +  D      N Y     +         D V
Sbjct: 182 VTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIV 241

Query: 225 VNL--------FSFSKAYGMMGWRVGYIAYPSEVEGF--ATQLLKVQDNIPICASIISQH 274
             +         S  K   +       +              + +   +    A    + 
Sbjct: 242 HEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEA 301

Query: 275 LALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA---IYLWARLPEKH 330
           +A+   +    E++  R    V+    + + L   G   V+   G    +      P   
Sbjct: 302 MAIGLREAMQYEYIEHR----VKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLT 357

Query: 331 LDDF---EVVRWLAHRHGVVVIPGG 352
            D F    +   +    GV  +  G
Sbjct: 358 QDQFPAQSLAASIYMETGVRSMERG 382

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	400
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.97
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.97
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.97
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.97
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.96
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.96
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.96
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.96
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.96
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.95
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.95
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.95
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.93
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.92
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.92
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.92
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.92
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.92
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.92
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.92
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.91
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.91
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.91
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.91
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.91
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.91
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.91
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.91
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.9
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.9
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.9
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.9
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.9
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.9
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.9
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.9
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.89
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.89
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.88
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.88
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.88
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.88
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.88
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.88
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.87
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.87
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.87
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.87
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.85
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.85
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.84
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.83
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.81
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.77
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.77
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.7
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.62
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.48
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.48

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=6.9e-58  Score=429.01  Aligned_cols=374  Identities=24%  Similarity=0.439  Sum_probs=333.9

Q ss_pred             hhHHHHhhhcCch----HHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768            5 AKLAKRALETEMP----IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (400)
Q Consensus         5 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~   80 (400)
                      |++|+|+.....+    ......++.+.|+++|+|+.|+|++++|+.+++++.++++++ ...|++..|.+++|++++++
T Consensus         1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lR~aia~~   79 (388)
T d1j32a_           1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQK   79 (388)
T ss_dssp             CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred             CchhhHhhcCCcCHHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            7889998875533    455566667789999999999999999999999999998875 56799999999999999999


Q ss_pred             HHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768           81 LNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (400)
Q Consensus        81 l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~  157 (400)
                      +.+.+|+  ++++|++|+|+++++..++.++++|||+|++++|+|+++...++..|..++.+ +.++ +++.+|++++++
T Consensus        80 ~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~-~~~~~~~~~~d~~~l~~  158 (388)
T d1j32a_          80 LQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL-PTTVETQFKVSPEQIRQ  158 (388)
T ss_dssp             HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCGGGTTCCCHHHHHH
T ss_pred             HHHhcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEE-ecccccccCCCHHHHHH
Confidence            9998864  68999999999999999999999999999999999999999999999999988 6654 567899999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC------CCcEEEEeccc
Q 015768          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE------GDHVVNLFSFS  231 (400)
Q Consensus       158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~------~~~~i~~~s~s  231 (400)
                      .+++++  +++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.++....      .+++++++|+|
T Consensus       159 ~~~~~~--~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~S  236 (388)
T d1j32a_         159 AITPKT--KLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA  236 (388)
T ss_dssp             HCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred             hCCCCC--eEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCCh
Confidence            998765  9999999999999999999999999999999999999999999988765543321      25789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                      |.++++|+|+||++++   +++++.+.........+++...+.++...+....+++.+.++.++++++.+.+.|++++++
T Consensus       237 K~~~~~GlRvG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  313 (388)
T d1j32a_         237 KTYAMTGWRVGFLAGP---VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL  313 (388)
T ss_dssp             TTTTCTTTCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred             hhhhcchhHeEEEEEC---HHHHHHHHHhhhhccccccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999   7888888877766677889999999999998878899999999999999999999998777


Q ss_pred             cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .+..|++++|+|++++....+..+++.+|++++||.+.||..|+.++++|++++. +++++++++++|+++++++
T Consensus       314 ~~~~p~gg~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~-~~e~l~~al~rl~~~l~~l  387 (388)
T d1j32a_         314 ECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT-DLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             BCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHh
Confidence            8888999999999998766678889999988899999999999999999999995 8999999999999999886

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.9e-55  Score=407.76  Aligned_cols=367  Identities=26%  Similarity=0.467  Sum_probs=316.5

Q ss_pred             HHHHhhhcCchH----HHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPI----MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +|+|+.....+.    ....+++.+.|+++|+|+.|++++++|+++++++.+++.++ ..+|++..|.+++|+++++++.
T Consensus         4 ~~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~lR~~ia~~~~   82 (382)
T d1b5pa_           4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFR   82 (382)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCHHHHHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcC-CcCCCCCCCCHHHHHHHHhhhh
Confidence            688888765443    34444667889999999999999999999999999998876 5689999999999999999999


Q ss_pred             hhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l  159 (400)
                      +.++  +++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+ |.++ +++.+|++.+++.+
T Consensus        83 ~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~  161 (382)
T d1b5pa_          83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV-ETLPEEGFVPDPERVRRAI  161 (382)
T ss_dssp             HTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHTTC
T ss_pred             hhcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEE-ecccccccCCCHHHHHHhC
Confidence            8875  468999999999999999999999999999999999999999999999999999 7654 56788999999988


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCC
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~  237 (400)
                      ++++  +++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.....  ...+++++++|+||.|+++
T Consensus       162 ~~~~--~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~  239 (382)
T d1b5pa_         162 TPRT--KALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT  239 (382)
T ss_dssp             CTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCG
T ss_pred             CCCC--eEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCc
Confidence            7665  99999999999999999999999999999999999999999999987654332  3467899999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      |+|+||++++   +++++.+.........+++.+.+.++..++....   .+....++.++++++.+.+.++..+. .+.
T Consensus       240 GlR~G~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~  315 (382)
T d1b5pa_         240 GWRIGYACGP---KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGL-KAV  315 (382)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CBC
T ss_pred             HhheEEEEEC---HHHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcCC-eEe
Confidence            9999999998   7888888887777777888888888777776422   44566677778888888888888765 778


Q ss_pred             CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      .|++++|+|++++....+...+.+.+. ++||.+.||..|+.++++|++++. +++++++++++|++++
T Consensus       316 ~p~gg~~~~~~~~~~~~~~~~~~~~l~-e~gV~v~PG~~F~~~~~iRis~~~-~~e~l~~al~rl~~~L  382 (382)
T d1b5pa_         316 RPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYAT-SEENLRKALERFARVL  382 (382)
T ss_dssp             CCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCS-CHHHHHHHHHHGGGGC
T ss_pred             cCCceEEEeEeCCCCCCCHHHHHHHHH-HCCEEEEeCcccCCCCeEEEEEcC-CHHHHHHHHHHHHHhC
Confidence            889999999999765556777777665 789999999999999999999985 8999999999998763

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=2e-54  Score=406.29  Aligned_cols=372  Identities=27%  Similarity=0.442  Sum_probs=327.5

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      +|+|+.-...+...++.++..+.+++|+|+.|+|++++|+.+++++.+++.++ ...|++..|..++|+++++++.+.++
T Consensus         2 ~s~~~~~~~~s~ir~~~~~~~~~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~   80 (388)
T d1gdea_           2 LSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNG   80 (388)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHCTTCEECCCCSCCSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             hhhhhhhCCccHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcC-ccCCCCCcCCHHHHHHHHHHHHhhcc
Confidence            68888888888888888888888999999999999999999999999998875 56799999999999999999987764


Q ss_pred             ---CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccC
Q 015768           87 ---LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK  162 (400)
Q Consensus        87 ---~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~  162 (400)
                         .++++|++|+|+++++..++.++++|||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++++++.++++
T Consensus        81 ~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~  159 (388)
T d1gdea_          81 IEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYVTDK  159 (388)
T ss_dssp             CCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEE-ECCGGGTTCCCHHHHHHHCCTT
T ss_pred             ccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEe-ecccccCCCCCHHHHHHhCccC
Confidence               346789999999999999999999999999999999999999999999999999 8764 46789999999999876


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-----CCCcEEEEeccccccCCC
Q 015768          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~  237 (400)
                      +  +++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+.+.+....     ..+++++++|+||.+|++
T Consensus       160 ~--~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~  237 (388)
T d1gdea_         160 T--RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMT  237 (388)
T ss_dssp             E--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCG
T ss_pred             C--eEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCc
Confidence            5  999999999999999999999999999999999999999999998765543221     246899999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      |+|+||++++   +++++.+.........+.+.+.+.++..++..+.  ++..+..+.+.+++..+.+.|...+. .+..
T Consensus       238 GlR~G~ii~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~  313 (388)
T d1gdea_         238 GWRLGFVAAP---SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL-PTVK  313 (388)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred             cccEEEEEee---ccchhhhhhccccccccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhccc-cccC
Confidence            9999999999   7888888888777788889999999998988632  34566677788888889999988765 6677


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      |.+++|+|++++....+..++++++++++||.+.||..|+  .++++|||++. +++++++++++|++++++..
T Consensus       314 p~gg~fl~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~-~~e~l~~al~rL~~~l~e~k  386 (388)
T d1gdea_         314 PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKERK  386 (388)
T ss_dssp             CCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence            8889999999987656889999999889999999999986  37899999985 89999999999999998753

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=7e-52  Score=388.94  Aligned_cols=374  Identities=25%  Similarity=0.396  Sum_probs=313.0

Q ss_pred             hHHHHhhhcC---chHHHHHHHHHhcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHH
Q 015768            6 KLAKRALETE---MPIMVQIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK   79 (400)
Q Consensus         6 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~   79 (400)
                      +.|+|+...+   .......+++-+.|+++|+|+.|+|   ++++|+.+++++.+++.++ ...|++..|.+++|+++++
T Consensus         3 ~~s~r~~~~~~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~-~~~Y~~~~G~~~LR~aia~   81 (395)
T d1xi9a_           3 RASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVE   81 (395)
T ss_dssp             CCCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHH
T ss_pred             cchhccccCcHHHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence            4577777643   1222223445677899999999986   6889999999999999775 5679999999999999999


Q ss_pred             HHHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHH
Q 015768           80 KLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLE  156 (400)
Q Consensus        80 ~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~  156 (400)
                      ++++.+|+  ++++|++|+|+++++..++.++.++||+|++++|+|+.+...++..|.+++.+ |.+ ++++.+|++.++
T Consensus        82 ~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~~~  160 (395)
T d1xi9a_          82 REKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDIR  160 (395)
T ss_dssp             HHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-EEEGGGTSEECHHHHH
T ss_pred             hhhhcccccccccccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEE-eccccccccchHHHHH
Confidence            99999875  58999999999999999999999999999999999999999999999999888 644 456889999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccc
Q 015768          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKA  233 (400)
Q Consensus       157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~  233 (400)
                      +.+.+++  +++++++||||||.+++.+++++|+++|++|++++|.|++|..+.+++....   ....+++++++|+||.
T Consensus       161 ~~~~~~~--~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~  238 (395)
T d1xi9a_         161 KKITDRT--KAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKV  238 (395)
T ss_dssp             HHCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTT
T ss_pred             Hhhcccc--cEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEEEEeCcchh
Confidence            9887665  9999999999999999999999999999999999999999999888654332   2345689999999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHH---HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768          234 YGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE  310 (400)
Q Consensus       234 ~g~~g~~~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  310 (400)
                      ++++|+|+||++..+. ......+.   .........++.+.|.++..++....+|+++.++.++++++.+.+.|++++.
T Consensus       239 ~~~~GlRvG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  317 (395)
T d1xi9a_         239 YFATGWRLGYMYFVDP-ENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPG  317 (395)
T ss_dssp             TCCGGGCCEEEEEECT-TCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred             cccchhhcEeeEecCH-HHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999876542 22222222   2222235567888999999999877789999999999999999999999987


Q ss_pred             CcccCCCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          311 GAVKGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      ..+..|++++|+|++++... .+..+++.++++++||.+.||..|+.  ++++||+++. +++++++++++|++++++
T Consensus       318 ~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~-~~e~l~eal~rl~~~l~e  394 (395)
T d1xi9a_         318 ISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLP-PIEILEEAMDRFEKFMKE  394 (395)
T ss_dssp             EECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHH
T ss_pred             ceecCCCeeEEEeEECCCCCCCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence            77888999999999987532 46778888898899999999999974  7899999985 899999999999999875

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=7.7e-51  Score=384.96  Aligned_cols=371  Identities=22%  Similarity=0.337  Sum_probs=318.9

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      |++++|+.+...+.|.++.++.++ .+.|+|+.|+|++++|+.+++++.+++.+..  ..+|++..|.+++|+++|++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~   80 (418)
T d2r5ea1           2 FDLPKRYQGSTKSVWVEYIQLAAQ-YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS   80 (418)
T ss_dssp             CCCCGGGTTCCCCHHHHHHHHHHH-HCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred             CchhhhhcCCCCCHHHHHHHHhcC-CCCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHH
Confidence            578899999999999999887554 6889999999999989999999999987643  4579999999999999999999


Q ss_pred             hhcCCC---CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCC---------CCC
Q 015768           83 QENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT---------LHP  150 (400)
Q Consensus        83 ~~~~~~---~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~---------~~~  150 (400)
                      +.+|.+   .++|++|+|+++|+..++.++++|||.|+++.|+|+++...++..|..++.+ +.++++         +..
T Consensus        81 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~  159 (418)
T d2r5ea1          81 QLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFI-PLKPNKTGGTISSADWVL  159 (418)
T ss_dssp             HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEESCCSSCEEGGGEEC
T ss_pred             HHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEE-Eecccccccchhhhhhhh
Confidence            988754   4789999999999999999999999999999999999999999999999888 776543         345


Q ss_pred             CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-----cCCCcEE
Q 015768          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-----VEGDHVV  225 (400)
Q Consensus       151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-----~~~~~~i  225 (400)
                      +.+.+.......+  +++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++.+...     ...++++
T Consensus       160 ~~~~~~~~~~~~~--~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i  237 (418)
T d2r5ea1         160 DNNELEALFNEKT--KMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTI  237 (418)
T ss_dssp             CHHHHHHHCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEE
T ss_pred             hHHHHhhhhhccc--cceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceee
Confidence            6777777665554  99999999999999999999999999999999999999999998886543221     2346889


Q ss_pred             EEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNR  298 (400)
Q Consensus       226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~  298 (400)
                      ++.|+||.++++|+|+||++++   +++++.+........++.+.+.|.++...+..       .++++.++++.++.++
T Consensus       238 ~~~S~SK~~~~pGlRiG~~~~~---~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r  314 (418)
T d2r5ea1         238 TIGSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR  314 (418)
T ss_dssp             EEEEHHHHTTCGGGCCEEEESC---HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred             eeecCCccccCCCccccccccc---chhhhhhhhcccccccccccchhhhccccccccccccccchhhHHHHHHHHHHhh
Confidence            9999999999999999999999   78999998888777788888888887766642       3467888899999999


Q ss_pred             HHHHHHhccCCCCcccCCCCceEEEeeCCCC-----------CCCHHHHHHHHHHhcCeEEeCCCccCC-------CCeE
Q 015768          299 EIIREALSPLGEGAVKGGEGAIYLWARLPEK-----------HLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHL  360 (400)
Q Consensus       299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~gi~v~~g~~~~~-------~~~i  360 (400)
                      +.+.+.|++++. .+..|++++|+|++++..           ..+..+++.+|++++||.+.||..|+.       .+++
T Consensus       315 ~~l~~~L~~~g~-~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~i  393 (418)
T d2r5ea1         315 DYMASFLAEVGM-NPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFV  393 (418)
T ss_dssp             HHHHHHHHHTTC-EEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEE
T ss_pred             hhHHhhHhhcCC-cccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEE
Confidence            999999999864 788899999999998531           135678999999889999999998863       4789


Q ss_pred             EEEeccCCHHHHHHHHHHHHHHHH
Q 015768          361 RISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       361 Ri~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      |||++. +++++++++++|++.+.
T Consensus       394 Ris~~~-~~e~l~~a~~rl~~~lg  416 (418)
T d2r5ea1         394 RYCFFK-KDENLQKAAEILRKWKG  416 (418)
T ss_dssp             EEECCS-CHHHHHHHHHHHHHHHT
T ss_pred             EEEecC-CHHHHHHHHHHHHHHHc
Confidence            999986 89999999999998763

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4e-50  Score=375.06  Aligned_cols=363  Identities=27%  Similarity=0.444  Sum_probs=308.0

Q ss_pred             HHHHhhhcC----chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +|+|+.+..    ....+..+.+.+.|+++|+|+.|+|++++|+.+++++.+.+.++ ..+|++..|.+++|+++++++.
T Consensus         1 ~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~-~~~Y~~~~G~~~lR~aia~~~~   79 (375)
T d1o4sa_           1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIG   79 (375)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHH
T ss_pred             CchhhhhCCCCHHHHHHHHHHHHHHCCCCeEECCCcCCCCCCCHHHHHHHHHHHhcC-CcCCCCCcCCHHHHHHHHhhhh
Confidence            466777433    22233444456778999999999999999999999999988775 5679999999999999999999


Q ss_pred             hhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhh
Q 015768           83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l  159 (400)
                      +.++.  +++++++|+|+++++..++.+++++||.|++++|+|+.+...+...|...+.+ +.+ ++++.++.+.++...
T Consensus        80 ~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  158 (375)
T d1o4sa_          80 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVV-ETFMSKNFQPSLEEVEGLL  158 (375)
T ss_dssp             HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHHTC
T ss_pred             hccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccc-cccccccccchhHHHHHhh
Confidence            88764  58999999999999999999999999999999999999999999999888887 444 445777888888776


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccC
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g  235 (400)
                      ..++  +++++++|+||||.+++.+++++|+++|++|+++||+||+|..+.++.....    ....+++++++|+||.++
T Consensus       159 ~~~~--~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  236 (375)
T d1o4sa_         159 VGKT--KAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS  236 (375)
T ss_dssp             CTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT
T ss_pred             ccCc--cEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhcc
Confidence            6655  8999999999999999999999999999999999999999998887654432    234679999999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  315 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  315 (400)
                      ++|+|+||++.+   ++.++.+...........+...+......++...   ....+.+.++++.+.+.|++.+. .+..
T Consensus       237 l~G~R~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~~~~~~~l~~~g~-~~~~  309 (375)
T d1o4sa_         237 MTGWRVGYLISS---EKVATAVSKIQSHTTSCINTVAQYAALKALEVDN---SYMVQTFKERKNFVVERLKKMGV-KFVE  309 (375)
T ss_dssp             CGGGCCEEEECC---HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCC---HHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred             CCcccccccccc---ccchhhhhhhhccccccccccchhhhhhhcccch---hhhHHHHHHHHHHHHHHHHhcCc-eEec
Confidence            999999999999   7888887777666666677777777777666533   45566678888889999988865 7888


Q ss_pred             CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768          316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~  384 (400)
                      |++++|+|++++.   +..+++.++++++||.+.||..|+.++|+||+++. +++++++++++|++++.
T Consensus       310 p~gg~f~~~~~~~---~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~-~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         310 PEGAFYLFFKVRG---DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDFLN  374 (375)
T ss_dssp             CSBSSEEEEECSS---CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred             CCccEEEEEECCC---CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHhc
Confidence            9999999999985   57788888888899999999999999999999985 89999999999999875

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.9e-50  Score=374.39  Aligned_cols=362  Identities=25%  Similarity=0.378  Sum_probs=317.1

Q ss_pred             HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-
Q 015768           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-   88 (400)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-   88 (400)
                      |+.....+.++++.++ +.+++.|+|+.|+|++++|+.+++++.+++.++ ..+|++..|.+++|+++++++++.+|++ 
T Consensus         7 ~~~~~~~~~~~~~~~~-a~~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~   84 (382)
T d1u08a_           7 KLPQLGTTIFTQMSAL-AQQHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQP   84 (382)
T ss_dssp             SCCCCCCCHHHHHHHH-HHHTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCC
T ss_pred             hCCCCCCcHHHHHHHH-hccCCCEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCCC
Confidence            4444445566666655 666899999999999999999999999988875 6789999999999999999999988764 


Q ss_pred             -CC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCe
Q 015768           89 -KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK  166 (400)
Q Consensus        89 -~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~  166 (400)
                       ++ +|++|+|+++++..++.++.++||.|++++|+|+.+...++..|..++.+ +.+++++.+|++++++...+++  +
T Consensus        85 ~~~~~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~--~  161 (382)
T d1u08a_          85 DADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM-ALQPPHFRVDWQEFAALLSERT--R  161 (382)
T ss_dssp             CTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCTTTCCCCHHHHHHHCCTTE--E
T ss_pred             CCCceEEeccchHHHHHHHHhhcccccceEEEecccccchhhhhhhccccceec-ccccccccCCHHHHhhhhccCc--c
Confidence             44 59999999999999999999999999999999999999999999988888 8888888899999999887765  9


Q ss_pred             EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-----CCCcEEEEeccccccCCCccee
Q 015768          167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRV  241 (400)
Q Consensus       167 ~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~g~~~  241 (400)
                      ++++++||||||.+++.+++++|.++|.+++++++.|+.|..+.+.+......     ..++++++.|+||.++++|+|+
T Consensus       162 ~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~Ri  241 (382)
T d1u08a_         162 LVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKV  241 (382)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCC
T ss_pred             EEEECCCCcccccccccccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccc
Confidence            99999999999999999999999999999999999999999887765332221     2468899999999999999999


Q ss_pred             EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceE
Q 015768          242 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY  321 (400)
Q Consensus       242 G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  321 (400)
                      ||++.+   +++++.+.........+.+.+.|.++..+++.+.+++.++++.++++++.+.+.+...+. .+..|++++|
T Consensus       242 G~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~p~gg~~  317 (382)
T d1u08a_         242 GYCVAP---APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRL-EILPCEGTYF  317 (382)
T ss_dssp             EEEECC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSC-EECCCCBSSE
T ss_pred             hhhhcc---chhHHHHHhhhcccccccccccccccccccccchHHHHHHHHHHHhhhhhhhhhhccCCc-EEecCCceEE
Confidence            999998   788888888777778889999999999999977788999999999999999999987664 8888999999


Q ss_pred             EEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          322 LWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       322 ~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      +|++++.. ..+..+++.+|++++||.+.||..|+.    .+++|||++. ++|++++++++|++
T Consensus       318 ~~~~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~-~~e~l~~al~RL~~  381 (382)
T d1u08a_         318 LLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ  381 (382)
T ss_dssp             EEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred             EEEecCCCCCCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHhC
Confidence            99999863 357889999999899999999999853    4689999986 89999999999875

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.3e-50  Score=374.70  Aligned_cols=369  Identities=22%  Similarity=0.318  Sum_probs=311.6

Q ss_pred             HHHhhhcCchHHHHH----HHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768            8 AKRALETEMPIMVQI----QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      |+|+.+...+.+.++    .+..+.|.++|+|+.|+|++++|+.+++++.+....  ...|++..|..++|+++++++.+
T Consensus         2 ~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~--~~~Y~~~~G~~~LR~aia~~~~~   79 (389)
T d2gb3a1           2 SDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPE--VVYYSHSAGIWELREAFASYYKR   79 (389)
T ss_dssp             CHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCS--SCCCCCTTCCHHHHHHHHHHHHH
T ss_pred             ChhhhcCCCCHHHHHHHHHHHHHHcCCCEEECCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCcCCHHHHHHHHHHHHH
Confidence            677776555555444    334567889999999999999999999999876543  67899999999999999999999


Q ss_pred             hcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768           84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus        84 ~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      .+|+  ++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|+.++.+ +.+++++..+.+.+...+.+
T Consensus        80 ~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  158 (389)
T d2gb3a1          80 RQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPV-TRRMEEGFAIPQNLESFINE  158 (389)
T ss_dssp             TSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEE-ECCGGGTSCCCTTGGGGCCT
T ss_pred             hcCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCcccccc-ccccccccchhhhhhhhccc
Confidence            8864  58999999999999999999999999999999999999999999999999888 88777665565666666655


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcc
Q 015768          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGW  239 (400)
Q Consensus       162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~  239 (400)
                      ++  +++++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+++....  ....++.+++.|+||.++++|+
T Consensus       159 ~~--~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~Gl  236 (389)
T d2gb3a1         159 RT--KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGA  236 (389)
T ss_dssp             TE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGG
T ss_pred             Cc--cEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCccc
Confidence            54  9999999999999999999999999999999999999999999988765432  2346788899999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      |+||+++++  +.+.+...... ....+++.+.+.++..++...+.+++++++.++++++.+.+.|+++++..+..|.++
T Consensus       237 RiG~~~~~~--~~i~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g  313 (389)
T d2gb3a1         237 RVGCLITRN--EELISHAMKLA-QGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGA  313 (389)
T ss_dssp             CCEEEECSC--HHHHHHHHHHH-HHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBS
T ss_pred             ceeeeeccc--hhHHHHHhhhh-hccccccccccccccccccccchhcccccccccccchhhhhhhhhhccccccCCCce
Confidence            999999985  45555444443 345566778888888888766778899999999999999999999988778888999


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHh-----cCeEEeCCCccCC-----CCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +|+|++++..  +..+++.+|+++     +||.+.||..|+.     ++++||+++. +++++++++++|+++++++.
T Consensus       314 ~~~~~~lp~~--~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~-~~~~l~~a~~~L~~~lk~f~  388 (389)
T d2gb3a1         314 FYITAELPVE--DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVL-EKDLLSRAIDVLMEGLKMFC  388 (389)
T ss_dssp             SEEEEECSSS--CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCS-CHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCC--CHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHHHhh
Confidence            9999999853  688899988765     4788999988752     5799999985 89999999999999999875

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=4e-50  Score=377.10  Aligned_cols=361  Identities=18%  Similarity=0.241  Sum_probs=298.2

Q ss_pred             HHHHHHHH-HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEE
Q 015768           18 IMVQIQEL-VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMV   94 (400)
Q Consensus        18 ~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~   94 (400)
                      .|..+.+. .+.|+++|+|+.|+|++++|+.+++++.++++++ ..+|+  .+.+++|+++++++++++|+  ++++|++
T Consensus        18 k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~-~~~Y~--~g~~~Lr~aia~~~~~~~g~~~~~~~I~v   94 (394)
T d1c7na_          18 KWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYT--GPTEEYKKTVKKWMKDRHQWDIQTDWIIN   94 (394)
T ss_dssp             HHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSB--CCCHHHHHHHHHHHHHHHCCCCCGGGEEE
T ss_pred             HHHHHHHHhHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCC-CcCCC--CCCHHHHHHHHHHHHHhcCCCCCCcceEe
Confidence            45555554 3557899999999999999999999999998765 45673  46789999999999999875  5899999


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLVSVVN  172 (400)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~~~~v~l~~  172 (400)
                      |+|+++++..++.++++|||.|+++.|.|+++...++..|...+.+ +...  .++.+|.+.++...... .++++++++
T Consensus        95 t~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~d~~~~~~~~~~~-~~~~i~l~~  172 (394)
T d1c7na_          95 TAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC-ELLEKDGYYTIDFQKLEKLSKDK-NNKALLFCS  172 (394)
T ss_dssp             ESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEEC-CCEEETTEEECCHHHHHHHHTCT-TEEEEEEES
T ss_pred             eccchhhhhhhhccccccccccccccCcccchhhHHhhhhhccccc-ccccccccccchhhhhhhhhccc-cceEEEecc
Confidence            9999999999999999999999999999999999999999998888 6543  33567888888776533 259999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc------CCCcEEEEeccccccCCCcceeEEEEc
Q 015768          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAY  246 (400)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~------~~~~~i~~~s~sK~~g~~g~~~G~i~~  246 (400)
                      ||||||.+++.+++++|+++|++|+++||+||+|..+.+++..+...      ..++.+++.|+||.++++|+|+||++.
T Consensus       173 P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~  252 (394)
T d1c7na_         173 PHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIII  252 (394)
T ss_dssp             SBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred             cccccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccc
Confidence            99999999999999999999999999999999999998876543321      136789999999999999999999998


Q ss_pred             cCCcHHHHHHHHHhhccCCcCccHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC-CCCcccCCCCceEEEe
Q 015768          247 PSEVEGFATQLLKVQDNIPICASII-SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGGEGAIYLWA  324 (400)
Q Consensus       247 ~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~  324 (400)
                      ++  +.+.+.+..........+... .+.++........++.++..+.++++++.+.+.++.. ..+.+..|++++|+|+
T Consensus       253 ~~--~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~~~  330 (394)
T d1c7na_         253 KN--PDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWI  330 (394)
T ss_dssp             CC--HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEE
T ss_pred             cC--hhhhhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccccceeecCCCceeEEEE
Confidence            86  677777776655444443333 3344444444455778888888888888888888763 3457778888999999


Q ss_pred             eCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++....+..+++++|++++||.+.||..|+  +++++|||++. +++++++++++|+++++++
T Consensus       331 ~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~-~~e~i~eal~rl~~~l~~L  393 (394)
T d1c7na_         331 DFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDL  393 (394)
T ss_dssp             ECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHHhc
Confidence            9987556889999999988899999999997  36899999985 8999999999999999986

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-50  Score=378.52  Aligned_cols=367  Identities=22%  Similarity=0.354  Sum_probs=314.6

Q ss_pred             HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      ++|+++.+...|..+.++ +.++++|+|+.|+|++++|+.+++++.+++.++. ...|++..|.+++|+++++++++.+|
T Consensus         4 ~~r~~~~~~~~~~~~~~~-~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g   82 (418)
T d1w7la_           4 ARRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG   82 (418)
T ss_dssp             CGGGTTCCCCTHHHHHHH-HHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             CccccCCCCCHHHHHHHH-hCCCCCEECCCCCCCCCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhC
Confidence            678888888888888775 6678999999999999999999999999988653 45799999999999999999999887


Q ss_pred             CC---CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-----------CCCCCCH
Q 015768           87 LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-----------KTLHPDA  152 (400)
Q Consensus        87 ~~---~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~  152 (400)
                      .+   .++|++|+|+++++..+++++.++||.|++++|+|+.+...+...|.+++.+ +.++           +++.++.
T Consensus        83 ~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~~d~  161 (418)
T d1w7la_          83 QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQNGELGSSSNWQLDP  161 (418)
T ss_dssp             CCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEECC---CCSEEGGGEECCH
T ss_pred             CCCCcccceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeecc-ccccccccccccccccCcccch
Confidence            65   3589999999999999999999999999999999999999999999988877 5442           3455676


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-----CCCcEEEE
Q 015768          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNL  227 (400)
Q Consensus       153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-----~~~~~i~~  227 (400)
                      +++.....+.+  +++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++.+....     ..++++++
T Consensus       162 ~~~~~~~~~~~--~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~  239 (418)
T d1w7la_         162 MELAGKFTSRT--KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTI  239 (418)
T ss_dssp             HHHHHHCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEE
T ss_pred             hhhhccccccc--cceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHcccccccccee
Confidence            66666655554  899999999999999999999999999999999999999999999876543322     24689999


Q ss_pred             eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHH
Q 015768          228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNREI  300 (400)
Q Consensus       228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~  300 (400)
                      .|+||.++++|+|+||++++   +++++.+.+......++++.+.+.++..++..       ..+++.++++.++++++.
T Consensus       240 ~S~SK~~~~pG~RvG~~v~~---~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~  316 (418)
T d1w7la_         240 GSAGKTFSATGWKVGWVLGP---DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDH  316 (418)
T ss_dssp             EEHHHHTTCGGGCCEEEECC---HHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHH
T ss_pred             cccCccccCCCCcccccccc---hhhhhhhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhh
Confidence            99999999999999999999   78999998888877888899999888888764       135778888999999999


Q ss_pred             HHHHhccCCCCcccCCCCceEEEeeCCCC------------CCCHHHHHHHHHHhcCeEEeCCCccCC-------CCeEE
Q 015768          301 IREALSPLGEGAVKGGEGAIYLWARLPEK------------HLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLR  361 (400)
Q Consensus       301 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~~gi~v~~g~~~~~-------~~~iR  361 (400)
                      +.+.|++++. .+..|++++|+|++++..            ..+..+++.+|++++||.+.||..|+.       ++++|
T Consensus       317 l~~~L~~~g~-~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iR  395 (418)
T d1w7la_         317 MIRSLQSVGL-KPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIR  395 (418)
T ss_dssp             HHHHHHTTTC-EEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEE
T ss_pred             hhhhhhhcCC-cccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEE
Confidence            9999999865 788899999999988521            123678899999999999999998852       57999


Q ss_pred             EEeccCCHHHHHHHHHHHHHHH
Q 015768          362 ISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       362 i~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ||++. +++++++++++|++..
T Consensus       396 is~~~-~~~~l~~a~~rl~~~~  416 (418)
T d1w7la_         396 FCFVK-DEATLQAMDEKLRKWK  416 (418)
T ss_dssp             EECCC-CHHHHHHHHHHHHHHH
T ss_pred             EEEcC-CHHHHHHHHHHHHHHh
Confidence            99985 8999999999998764

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.5e-49  Score=374.09  Aligned_cols=353  Identities=21%  Similarity=0.281  Sum_probs=293.2

Q ss_pred             CCeEEcCCCCCCCC----CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc--------CCCCCcEEEeCC
Q 015768           30 KNAVSLAQGVVYWQ----PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--------KLYKSSVMVTAG   97 (400)
Q Consensus        30 ~~~i~~~~~~~~~~----~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~--------~~~~~~i~~~~g   97 (400)
                      +++|+|+.|+|+++    .++.+++++.+.+......+|++..|.+++|+++++++++++        ++++++|++|+|
T Consensus        30 ~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~it~G  109 (412)
T d1bw0a_          30 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG  109 (412)
T ss_dssp             SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred             CCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEEEecc
Confidence            57899999998763    357788888888877667789999999999999999998875        356889999999


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768           98 ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (400)
Q Consensus        98 ~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np  176 (400)
                      +++++..++.+++++||+|++++|+|+.+...++..|++++.+ |.++ +++..+++.+++.....+  +++++++|+||
T Consensus       110 ~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~~~~~l~~~~~~~~--~~~~l~np~NP  186 (412)
T d1bw0a_         110 GSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFY-NCRPENDWEADLDEIRRLKDDKT--KLLIVTNPSNP  186 (412)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTE--EEEEEESSCTT
T ss_pred             cccchhhhhhhhhccccceeeeeccchhhhhhhhccCcccccc-ccccccccchhhHHHHhhhhccc--ccccccccccc
Confidence            9999999999999999999999999999999999999999999 8764 457789999998887665  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--------CCCcEEEEeccccccCCCcceeEEEEccC
Q 015768          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--------EGDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--------~~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      ||.+++.+++++|+++|++|++++|+||+|..+.+++......        .....++++|+||.++++|+|+||+++++
T Consensus       187 tG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~  266 (412)
T d1bw0a_         187 CGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVD  266 (412)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEEC
T ss_pred             ccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccc
Confidence            9999999999999999999999999999999998876432221        13457889999999999999999998875


Q ss_pred             Cc---HHHHHHHHHhhccCCcCccHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEe
Q 015768          249 EV---EGFATQLLKVQDNIPICASIISQHLALYSL-QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  324 (400)
Q Consensus       249 ~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  324 (400)
                      +.   ...+......... ..+++...+.++...+ ....+++.++++.+.++++.+.+.|.+..++.+..|++++|+|+
T Consensus       267 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~p~gg~~l~~  345 (412)
T d1bw0a_         267 PHGNGPSFLEGLKRVGML-VCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMS  345 (412)
T ss_dssp             TTCSCHHHHHHHHHHHHH-HTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEE
T ss_pred             hhhcchhhhhhhcccccc-ccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhcCceecCCCCceEEEE
Confidence            21   2334444333322 2233444444444444 44557889999999999999999998876667888999999999


Q ss_pred             eCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          325 RLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       325 ~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +++..    ..+..+++.+|++++||.+.||..|+.++++|||++. +++++++++++|+++++++.
T Consensus       346 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~-~~e~l~eal~Rl~~~l~~~~  411 (412)
T d1bw0a_         346 RIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-PVEVYREAVERIKAFCQRHA  411 (412)
T ss_dssp             EECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHHB
T ss_pred             eCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHhcC
Confidence            88632    2367889999998899999999999999999999986 89999999999999998764

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.9e-48  Score=359.63  Aligned_cols=349  Identities=17%  Similarity=0.226  Sum_probs=289.2

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHh
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      +|+|+.|+++|++|+.+++++.+.+.++ ..+|++..| +++++++++++++++|.  ++++|++|+|+++++..++.++
T Consensus         1 ~~~~~~~~~df~~p~~i~eal~~~~~~~-~~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l   78 (361)
T d1d2fa_           1 LLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW   78 (361)
T ss_dssp             CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHS
T ss_pred             CcCcCCCCCCCCCCHHHHHHHHHHHhCC-CCCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhhhc
Confidence            5899999999999999999999998776 457977777 67999999999999875  5899999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                      ++|||+|++++|+|+++...++..|..++.+ +.+  ++++.+|++.+++.+.... ++++++++|+||||.+++.++++
T Consensus        79 ~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~~~~~~~~~~-~~~i~l~~p~NPTG~~~s~~~~~  156 (361)
T d1d2fa_          79 SETGEGVVIHTPAYDAFYKAIEGNQRTVMPV-ALEKQADGWFCDMGKLEAVLAKPE-CKIMLLCSPQNPTGKVWTCDELE  156 (361)
T ss_dssp             SCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECEECSSSEECCHHHHHHHHTSTT-EEEEEEESSCTTTCCCCCTTHHH
T ss_pred             cccccccccccccccchhHHHHhhcceEEee-cccccccccccccccchhhcccCC-ceeEEecccccccccccchhhhh
Confidence            9999999999999999999999999998877 654  4556789999999886433 58999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH-HHHhhcc
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ-LLKVQDN  263 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~-l~~~~~~  263 (400)
                      +|+++|+++|+++|+||+|..+.+++....   ....++.+++.|+||.++++|+|+||+...+  ....+. +......
T Consensus       157 ~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~--~~~~~~~~~~~~~~  234 (361)
T d1d2fa_         157 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIEN--SSSRDAYLSALKGR  234 (361)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECS--HHHHHHHHHHHHTT
T ss_pred             hhhhhhhhhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecch--hHHHHHHhhhcccc
Confidence            999999999999999999999887654332   2345678999999999999999999987664  333333 3333322


Q ss_pred             C-CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          264 I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       264 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      . ..+++...+.++..+++...++.++.+..++++++.+.+.+.+ ...+.+..|++++|+|++++....+..+++.+|+
T Consensus       235 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll  314 (361)
T d1d2fa_         235 DGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALI  314 (361)
T ss_dssp             SCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHH
T ss_pred             cccccchhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhcccccccccCceeEEEEEccCCCCCHHHHHHHHH
Confidence            2 2345555666655666655677788888888888888777665 3446777888899999998755568999999999


Q ss_pred             HhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768          342 HRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       342 ~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      +++||.+.||..|+  +++++|+|++. +++++++++++|++++++++
T Consensus       315 ~~~gv~v~pG~~F~~~~~~~vRis~~~-~~e~l~~al~rl~~~l~~lr  361 (361)
T d1d2fa_         315 EQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAVR  361 (361)
T ss_dssp             HTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHHC
T ss_pred             HhCCEEEEeccccCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHHhcC
Confidence            88899999999987  46789999985 89999999999999999863

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.9e-49  Score=365.27  Aligned_cols=358  Identities=27%  Similarity=0.391  Sum_probs=305.0

Q ss_pred             hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      |++|.|+.....+.+.++..+ +...++|+|+.|+|++++|+.+++++.+++.+  ...|++..|..++|+++++++   
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~l-a~~~~~I~ls~g~p~~~~p~~i~~al~~~l~~--~~~Y~~~~G~~elr~aiA~~~---   74 (368)
T d1v2da_           1 MRLHPRTEAAKESIFPRMSGL-AQRLGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF---   74 (368)
T ss_dssp             CCCCGGGGGC---CHHHHHHH-HHHHTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH---
T ss_pred             CCCChhhhhcCCCHHHHHHHH-hccCCCEEecCCCCCCCCCHHHHHHHHHHhhc--ccCCCCCcCCHHHHHHHHhhc---
Confidence            678889988777777777654 55578999999999999999999999998876  467999999999999999998   


Q ss_pred             cCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccC
Q 015768           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETK  162 (400)
Q Consensus        85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~  162 (400)
                       ++++++|++|+|+++++..++.++.++||.|+++.|+|+.+...++..|..++.+ +.+  .+++.+|.+.+++.+++.
T Consensus        75 -~~~~~~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~~~~~  152 (368)
T d1v2da_          75 -AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV-RLDLTPEGFRLDLSALEKALTPR  152 (368)
T ss_dssp             -TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHTTCCTT
T ss_pred             -ccCCcceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCcccee-ccccccccccCCHHHHHHhhccC
Confidence             7899999999999999999999999999999999999999999999999988877 664  345678999999999876


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcce
Q 015768          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWR  240 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~  240 (400)
                      +  +++++++||||||.+++.+++++|+++|++||+++|+|++|..+........  ....+..+++.|+||.++++|+|
T Consensus       153 ~--~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R  230 (368)
T d1v2da_         153 T--RALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYR  230 (368)
T ss_dssp             E--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGC
T ss_pred             c--eEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecccccccccccc
Confidence            5  8999999999999999999999999999999999999999987665443322  22456788889999999999999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +||++.+   +++.+.+.........+++.+.|.++..++...  .++.++.++.++++++.+.+.|++++. .+..|++
T Consensus       231 ~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~p~g  306 (368)
T d1v2da_         231 VGWIVGP---KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGL-RVYVPEG  306 (368)
T ss_dssp             CEEEECC---TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTC-CEECCSB
T ss_pred             ccccccc---ccccchhhhhhhccccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhcCc-EEecCCc
Confidence            9999999   677888887777778888889988888887642  257788888899999999999999865 7888888


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ++|+|++++..  +..    ++++++||.+.||..|+    .++++|||++. +++++++++++|++++
T Consensus       307 ~~~~~~~l~~~--~~~----~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~-~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         307 TYFLMAELPGW--DAF----RLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVV  368 (368)
T ss_dssp             SSEEEEECTTC--CHH----HHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred             eeEEEEeCCcc--HHH----HHHHhCCEEEEechhhCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHhC
Confidence            99999999852  333    34568999999999885    35799999985 8999999999999874

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.5e-47  Score=359.41  Aligned_cols=373  Identities=24%  Similarity=0.356  Sum_probs=299.4

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCC--CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +|++..+...+.+.++.++ +.++++|+|+.|.|+..  +++.+.+++.+.++..  ....|++..|.+++|+++++++.
T Consensus        16 ~s~~~~~~~~s~ir~~~~~-~~~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   94 (420)
T d1vp4a_          16 ISKIGQNMKSSIIREILKF-AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLE   94 (420)
T ss_dssp             CCHHHHTCCCCCHHHHTTT-TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHH
T ss_pred             HhHHHHhCCCcHHHHHHHH-hCCCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHH
Confidence            4444445556666666554 57799999999998763  3455556666665442  24679999999999999999999


Q ss_pred             hhcCC---CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh
Q 015768           83 QENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (400)
Q Consensus        83 ~~~~~---~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l  159 (400)
                      +.+|+   ++++|++|+|+++++..++.++++|||.|+++.|+|+.+...++..|++++.+ |.++++  ++++.++..+
T Consensus        95 ~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~--~~~~~l~~~~  171 (420)
T d1vp4a_          95 RMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDG--MDLNVLERKL  171 (420)
T ss_dssp             HHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHHHHH
T ss_pred             HHhCCCCCCHHHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhcccc-cccccc--cccchhhhhh
Confidence            98764   58999999999999999999999999999999999999999999999999999 887775  4776665543


Q ss_pred             c------cCCCCe-EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEe
Q 015768          160 E------TKPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLF  228 (400)
Q Consensus       160 ~------~~~~~~-~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~  228 (400)
                      .      ..+.++ ++++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+++.....    ...+.+++++
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~  251 (420)
T d1vp4a_         172 SEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLN  251 (420)
T ss_dssp             HHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEE
T ss_pred             hhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEe
Confidence            2      111123 4556689999999999999999999999999999999999999887654322    2367888899


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhc
Q 015768          229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      |++|.++ +|+|+||++.+   +++++++.+.......+.+.+.+.++...+..+.  +++.+.++.++++++.+.+.|+
T Consensus       252 s~sk~~~-~G~RiG~~~~~---~~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~  327 (420)
T d1vp4a_         252 TFSKVLA-PGLRIGMVAGS---KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE  327 (420)
T ss_dssp             ESTTTTC-GGGCEEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-ccccccccccc---chhhhhhhhhhhhccccCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhh
Confidence            9999885 99999999998   8999999888777777888899988888887533  4556666667776666666555


Q ss_pred             ----cCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHH
Q 015768          307 ----PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADR  378 (400)
Q Consensus       307 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~  378 (400)
                          +.+++.+..|.+++|+|+++++.. +..++++.+ +++||.+.||..|+.    .+++|||++..+++++++++++
T Consensus       328 ~~~~~~~g~~~~~p~gg~f~~~~~~~~~-d~~~~~~~l-~~~gV~v~PG~~F~~~~~~~~~iRls~~~~~~e~l~~a~~r  405 (420)
T d1vp4a_         328 EYFSDIPGVKWVKSEGGLFIWLTLPEGF-DTWEMFEYA-KRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR  405 (420)
T ss_dssp             HHSTTSTTCEECCCSBSSEEEEECCTTC-CTTTTHHHH-HHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred             hhhccCCCcEEecCCceEEEEEECCCCC-CHHHHHHHH-HHCCeEEEechhhCCCCCCCCEEEEEeCcCCHHHHHHHHHH
Confidence                455678888999999999998753 666777765 589999999998863    5699999987689999999999


Q ss_pred             HHHHHHHHhcc
Q 015768          379 LRRGLEELVKD  389 (400)
Q Consensus       379 l~~~l~~~~~~  389 (400)
                      |+++++++.++
T Consensus       406 L~~~l~~~~~~  416 (420)
T d1vp4a_         406 LREVVLEYGKE  416 (420)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHhhHh
Confidence            99999998764

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=1.7e-46  Score=353.68  Aligned_cols=372  Identities=22%  Similarity=0.342  Sum_probs=300.8

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCC--CcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      +|+|++....+...++.+ +++.+++|+|+.|.|+..  +.+.+.+++.+.+....  ...|++..|.+++|+++++++.
T Consensus         7 ~~~~~~~~~~s~ire~~~-~~~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~   85 (403)
T d1wsta1           7 FSEKAMLMKASEVRELLK-LVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWME   85 (403)
T ss_dssp             CCHHHHHCCCHHHHHHHH-HHTSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCcHHHHHHH-HhCCCCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHH
Confidence            677777766666655555 456799999999987653  34455566777664422  4579999999999999999999


Q ss_pred             hhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHH---
Q 015768           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK---  157 (400)
Q Consensus        83 ~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~---  157 (400)
                      +.+|  +++++|++|+|+++++..++.++.++||.|++++|+|+.+...++..|.+++.+ |.++++.  +...+..   
T Consensus        86 ~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~--~~~~~~~~~~  162 (403)
T d1wsta1          86 KRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISI-PLDDKGM--RVDLLEEKLE  162 (403)
T ss_dssp             HHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTEE--CHHHHHHHHH
T ss_pred             HHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeE-eecccCC--ccccccccch
Confidence            8876  468999999999999999999999999999999999999999999999999998 8776542  2222222   


Q ss_pred             -hhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccc
Q 015768          158 -TLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFS  231 (400)
Q Consensus       158 -~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~s  231 (400)
                       ... ......++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.+...    ...+++++++|+|
T Consensus       163 ~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~S  242 (403)
T d1wsta1         163 ELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFS  242 (403)
T ss_dssp             HHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEEST
T ss_pred             hhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEcccc
Confidence             222 2222456777799999999999999999999999999999999999999887655432    2357899999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccC-
Q 015768          232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPL-  308 (400)
Q Consensus       232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~-  308 (400)
                      |.++ +|+|+||++.+   +++++.+...........+...+.+....+....  .++.+.++.+.++++.+.+.|.+. 
T Consensus       243 K~~~-~G~RiG~~i~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  318 (403)
T d1wsta1         243 KILA-PGFRIGWVAAH---PHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYM  318 (403)
T ss_dssp             TTTC-GGGCCEEEEEC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ceec-Ccccccccccc---hHHHHHHHHHHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9996 99999999998   7888888877766667778888887777776533  556777888888888888888874 


Q ss_pred             -CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          309 -GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       309 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                       .++.+..|.+++|+|++++... +.+.+++.|. ++||.+.||..|+.    ++++||+++..+++++++++++|++++
T Consensus       319 ~~~~~~~~p~gg~~~~~~~~~~~-~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l  396 (403)
T d1wsta1         319 PEGVEWTKPEGGMFVRVTLPEGI-DTKLMMERAV-AKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETI  396 (403)
T ss_dssp             CTTCEECCCSBSSEEEEECCTTC-CTTTTHHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             cCCeEEeCCCceeEEEEECCCCC-CHHHHHHHHH-HCCEEEEechhhcCCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence             3357788999999999998754 6667777665 88999999998853    579999998778999999999999999


Q ss_pred             HHHhc
Q 015768          384 EELVK  388 (400)
Q Consensus       384 ~~~~~  388 (400)
                      ++..+
T Consensus       397 ~~~~k  401 (403)
T d1wsta1         397 KEEMK  401 (403)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98765

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=2.9e-45  Score=347.30  Aligned_cols=349  Identities=21%  Similarity=0.316  Sum_probs=279.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCC----------CCCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEe
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDP----------SISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVT   95 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----------~~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~   95 (400)
                      .++|+|+.++|.+. +..+.+.+.+.....          ....|++..|.+++|+++++|+.+++|    +++++|++|
T Consensus        36 ~G~i~l~~aen~l~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e~Ivit  114 (428)
T d1iaya_          36 NGVIQMGLAENQLC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA  114 (428)
T ss_dssp             TSBEECSSCCCCSS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred             CceEEeecccCccc-hHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChhhEEEc
Confidence            45999999987652 355555554432211          134698899999999999999999875    358899999


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh-cCcEEEEeccCCC-CCCCCCHHHHHHhhc----cCCCCeEEE
Q 015768           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSS-KTLHPDADWLEKTLE----TKPTPKLVS  169 (400)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~~~~e~l~~~l~----~~~~~~~v~  169 (400)
                      +|+++++..++.++++|||.|+++.|+|+++...+.. .|++++.+ +.+. +++.+|.+.++..+.    ....+++++
T Consensus       115 ~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  193 (428)
T d1iaya_         115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPI-HCESSNNFKITSKAVKEAYENAQKSNIKVKGLI  193 (428)
T ss_dssp             EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEE-CCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEe-ecccccccccccccccchhhhhhccCCCceEEE
Confidence            9999999999999999999999999999999887764 58899998 7764 457889988876543    344468999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc------------cCCCcEEEEeccccccCCC
Q 015768          170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC------------VEGDHVVNLFSFSKAYGMM  237 (400)
Q Consensus       170 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~------------~~~~~~i~~~s~sK~~g~~  237 (400)
                      +++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.++..            ...++++++.|+||.++++
T Consensus       194 l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~  273 (428)
T d1iaya_         194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLP  273 (428)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCG
T ss_pred             EccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCC
Confidence            9999999999999999999999999999999999999999887654321            1346789999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC---cHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768          238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNREIIREALSPLGEGAVK  314 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  314 (400)
                      |+|+||+++.+  +.+.+.+.....  ....+...+.++.+.+...   ++++++.++.++++++.+.+.|+..+. .+.
T Consensus       274 GlRiG~~~~~~--~~l~~~~~~~~~--~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~~gi-~~~  348 (428)
T d1iaya_         274 GFRVGIIYSFN--DDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGI-KCL  348 (428)
T ss_dssp             GGCEEEEEESC--HHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CBC
T ss_pred             Ccccccccccc--cchhhhhhhhhc--ccccccccccchhhhhhhhccccccccccccccchhHHHHHHHHHhCCC-EEe
Confidence            99999999875  667777666543  3345566666666666541   245667777888889999999988764 788


Q ss_pred             CCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       315 ~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                      .|++++|+|++++...     .+..+++.+|++++||.+.||..|+  .++|+|||++..++++++++++||++++..
T Consensus       349 ~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~~~l~~al~Rl~~~l~~  426 (428)
T d1iaya_         349 KNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             CCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHhh
Confidence            8999999999987432     1244678889888999999999986  478999999876788899999999999864

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=7.7e-45  Score=344.70  Aligned_cols=364  Identities=21%  Similarity=0.316  Sum_probs=284.1

Q ss_pred             chHHHHHHHHHhc-------CCCeEEcCCCCCCCCCcHHHHHHHHHhhcC-----C------CCCCCCCCCCcHHHHHHH
Q 015768           16 MPIMVQIQELVRG-------AKNAVSLAQGVVYWQPPKMAMEKVKELVWD-----P------SISKYGADEGLPELRDAL   77 (400)
Q Consensus        16 ~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~-----~------~~~~y~~~~g~~~~~~~~   77 (400)
                      -|++.-.+.+.++       ..++|+|+.++|.+. .+.+.+.+.+....     .      ....|++..|.+++|+++
T Consensus        15 s~y~~g~~~~~~~~~~~~~np~G~i~l~~~en~l~-~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ai   93 (431)
T d1m7ya_          15 SSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAM   93 (431)
T ss_dssp             CHHHHHHHHHHHSBCCSSSCTTSBEECSSCCCCSC-HHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHH
T ss_pred             CchhhhhhhhhcCCCCCcCCCCcEEEeeccccccc-HHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHH
Confidence            4565555544332       234899999987763 34444444432110     0      123598999999999999


Q ss_pred             HHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh-cCcEEEEeccCCC-CCCCCC
Q 015768           78 VKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSS-KTLHPD  151 (400)
Q Consensus        78 a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~~~  151 (400)
                      |+++++++|    +++++|++|+|+++++..++.++++|||+|+++.|+|+.+...++. .|++++.+ +.++ +++.++
T Consensus        94 A~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v-~~~~~~~~~l~  172 (431)
T d1m7ya_          94 VDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI-HCTSSNGFQIT  172 (431)
T ss_dssp             HHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE-ECCGGGTSCCC
T ss_pred             HHHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccc-cccchhccccc
Confidence            999999875    4588999999999999999999999999999999999999888764 57899988 7764 468889


Q ss_pred             HHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--------
Q 015768          152 ADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--------  219 (400)
Q Consensus       152 ~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--------  219 (400)
                      .+.+++.+.    ....++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+...        
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~  252 (431)
T d1m7ya_         173 ETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRN  252 (431)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTT
T ss_pred             HHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcc
Confidence            999888775    23345899999999999999999999999999999999999999999988876543211        


Q ss_pred             ------CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC---cHHHHHH
Q 015768          220 ------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTER  290 (400)
Q Consensus       220 ------~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~  290 (400)
                            ..++++++.|+||.+|++|+|+||+++++   +.+......... ....+...+.++.+.+...   .++..+.
T Consensus       253 ~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~---~~i~~~~~~~~~-~~~~~~~~~~~~~a~l~~~~~~~~~~~~~  328 (431)
T d1m7ya_         253 CDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND---DMVVAAATKMSS-FGLVSSQTQHLLSAMLSDKKLTKNYIAEN  328 (431)
T ss_dssp             CSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESC---HHHHHHHHHHGG-GSCCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             cccccccCceEEEEecCcccccCCCCccceeccch---hhhHHHHHHHhc-cccccccccchhhhhhccchhhhhhhhhh
Confidence                  13578999999999999999999999984   444333333222 3344555665555555541   2567778


Q ss_pred             HHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEE
Q 015768          291 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRIS  363 (400)
Q Consensus       291 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~  363 (400)
                      ++.++++++.+.+.|++.+. .+..|.+++|+|++++...     .+..+++.++++++||.+.||..|+.  ++|+||+
T Consensus       329 ~~~~~~~~~~l~~~L~~~gi-~~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~  407 (431)
T d1m7ya_         329 HKRLKQRQKKLVSGLQKSGI-SCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC  407 (431)
T ss_dssp             HHHHHHHHHHHHHHHHTTTC-EECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEE
T ss_pred             hhhhhhhhhhhhhhhhcCCc-EEecCCceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEE
Confidence            88888999999999988664 8888899999999987532     13456888898889999999999874  7899999


Q ss_pred             eccCCHHHHHHHHHHHHHHHHHH
Q 015768          364 FGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       364 ~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++..+++++++++++|++++.++
T Consensus       408 ~a~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         408 FANLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             CSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             eCcCCHHHHHHHHHHHHHHHHHh
Confidence            98767889999999999999875

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=2.8e-42  Score=319.15  Aligned_cols=328  Identities=17%  Similarity=0.232  Sum_probs=269.6

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~  110 (400)
                      ++|||+.|.+++++|+.+++++.+....  ...| +..+..++|+++++++    ++++++|++++|+++++..++.++.
T Consensus        23 ~~idls~~~np~~~p~~~~~a~~~~~~~--~~~Y-p~~~~~~Lr~aia~~~----~v~~~~I~~~~g~~~~~~~~~~~~~   95 (355)
T d1lc5a_          23 QLLDFSANINPLGMPVSVKRALIDNLDC--IERY-PDADYFHLHQALARHH----QVPASWILAGNGETESIFTVASGLK   95 (355)
T ss_dssp             GSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSC-CCTTCHHHHHHHHHHH----TSCGGGEEEESSHHHHHHHHHHHHC
T ss_pred             heEEccCCCCCCCCCHHHHHHHHHHHHH--hccC-CCCChHHHHHHHHHHh----CCCHHHEEecccHHHHHHHHHhhhc
Confidence            5899999999999999999999998765  4568 5556789999999987    8999999999999999998887764


Q ss_pred             CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       111 ~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                        |+.+++..|.|..+.......+..++.+ |++. +++.++ +.+++.+.+++  +++++++||||||.+++.+++.+|
T Consensus        96 --~~~~~v~~p~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~-~~~~~~~~~~~--~~v~l~nP~NPtG~~~~~e~l~~i  169 (355)
T d1lc5a_          96 --PRRAMIVTPGFAEYGRALAQSGCEIRRW-SLREADGWQLT-DAILEALTPDL--DCLFLCTPNNPTGLLPERPLLQAI  169 (355)
T ss_dssp             --CSEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCC-TTHHHHCCTTC--CEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             --cccccccCCccceeccccccccccceee-eeeccCCccce-eeeeecccccc--ceeeeecccCcccccchhhhhhhh
Confidence              4566677899988888888889888888 7753 455544 45666666655  999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      +++|++|++++|+||+|..+.+......  ....++++++.|+||.+|++|+|+||+++++  +.+.+.++...  .+++
T Consensus       170 ~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~--~~~~~~~~~~~--~~~~  245 (355)
T d1lc5a_         170 ADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--DAAMARMRRQQ--MPWS  245 (355)
T ss_dssp             HHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--HHHHHHHHHHS--CTTC
T ss_pred             hhhccccccccccccceeeeeeecccccccccccccceeecccccccccccccccceeccc--hhhhHHHHhhc--CCcc
Confidence            9999999999999999998877654332  2345789999999999999999999999885  44556665544  3567


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      .+.+++.++..+++. .++..+.++.++++++++.+.|.+++++.+. |.+++|+|++++.   +..+++..|. ++||.
T Consensus       246 ~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-p~~~~f~~~~~~~---~~~~~~~~L~-~~gv~  319 (355)
T d1lc5a_         246 VNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCER---EDIDLQRRLL-TQRIL  319 (355)
T ss_dssp             SCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESC---TTCCHHHHHH-TTTEE
T ss_pred             ccccccccccccccc-cchhHHHHHHHHHHHHHHHHHHhhcCCcEEC-CCCCEEEEEECCC---CHHHHHHHHH-HCCcE
Confidence            889999999999986 5677888889999999999999998876655 5568999999985   4566787776 78999


Q ss_pred             EeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          348 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       348 v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ++||..|.  .++++||+++  +++++++++++|++++
T Consensus       320 vr~~~~f~~~~~~~iRis~~--~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         320 IRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVL  355 (355)
T ss_dssp             CEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred             EEeCccCCCCCCCEEEEEeC--CHHHHHHHHHHHHHhC
Confidence            99998875  4689999997  5888888888887753

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-40  Score=307.88  Aligned_cols=322  Identities=22%  Similarity=0.309  Sum_probs=261.2

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      ++++.|.|+.+++++++++.+.+        .....| |..+..++++++++++    |+++++|++|+|+++++..+++
T Consensus        25 ~~~~~i~L~~ne~p~~~~~~~~~--------~~l~rY-Pd~~~~~Lr~~ia~~~----gv~pe~I~it~Gs~eai~~~~~   91 (354)
T d1fg7a_          25 GGNGDVWLNANEYPTAVEFQLTQ--------QTLNRY-PECQPKAVIENYAQYA----GVKPEQVLVSRGADEGIELLIR   91 (354)
T ss_dssp             TTTCSEECSSCCCSSCCCCCCCC--------CCTTSC-CCSSCHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHHH
T ss_pred             CCCCCEEeeCCCCCCCCCHHHHH--------HHHhcC-CCCcHHHHHHHHHHHh----CCChHHeeeccCchHHHHHHHH
Confidence            35678999999988876654332        225568 5556788999999887    8999999999999999999999


Q ss_pred             HhcCCCC-EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768          108 TLCDAGD-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (400)
Q Consensus       108 ~l~~~gd-~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  186 (400)
                      ++.+||| .|+++.|+|..+...++..|.+++.+ +.++ ++.+|++.++..+. +  +++|++++||||||.+++.+++
T Consensus        92 ~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~-~~~~-~~~~d~~~l~~~~~-~--~~~v~~~~pnNPtG~~~~~~~~  166 (354)
T d1fg7a_          92 AFCEPGKDAILYCPPTYGMYSVSAETIGVECRTV-PTLD-NWQLDLQGISDKLD-G--VKVVYVCSPNNPTGQLINPQDF  166 (354)
T ss_dssp             HHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEEC-CCCT-TSCCCHHHHHTSCT-T--EEEEEEESSCTTTCCCCCHHHH
T ss_pred             HhhccccccccccccccccchhhhhccCceeecc-cccc-ccccchhhhhhccc-c--cceeeccCCCccceeEeeeccc
Confidence            9999998 58889999999999999999999988 7754 57899999987663 3  5999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768          187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  265 (400)
Q Consensus       187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~  265 (400)
                      +.+.+.++ ++.++++||+|..+....... .....++.++++||||.+|++|+|+||++++   +++++.+.+...  .
T Consensus       167 ~~~~~~~~-~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~---~~~i~~l~~~~~--~  240 (354)
T d1fg7a_         167 RTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN---EEVINLLMKVIA--P  240 (354)
T ss_dssp             HHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC---HHHHHHHHHHSC--S
T ss_pred             cccccccc-ccccccccccchhhccccccchhhcccccceEEeCCccccCCCcccccccccc---chhhhhhhhhcC--c
Confidence            99888776 688899999998887654332 3345678899999999999999999999998   899999887765  5


Q ss_pred             cCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768          266 ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  344 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  344 (400)
                      ++.+.+.+.++..++.. ...+.....+++.+.++.+.+.|.++++.....|.+++|+|++++    +..++++.|+ ++
T Consensus       241 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~----~~~~~~~~L~-~~  315 (354)
T d1fg7a_         241 YPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSLW-DQ  315 (354)
T ss_dssp             SCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHHH-HT
T ss_pred             cchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCC----CHHHHHHHHH-HC
Confidence            56677777776666654 224455666778888899999999988755555667999999997    4678888886 78


Q ss_pred             CeEEeCCCcc-CCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768          345 GVVVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLR  380 (400)
Q Consensus       345 gi~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~  380 (400)
                      ||.++++..| +.++|+|||++  ++++.+.++++|+
T Consensus       316 gIlvr~~~~~~~~~~~lRisig--t~ee~~~~l~aLk  350 (354)
T d1fg7a_         316 GIILRDQNKQPSLSGCLRITVG--TREESQRVIDALR  350 (354)
T ss_dssp             TEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHH
T ss_pred             CcEEecCCCCCCCCCEEEEEeC--CHHHHHHHHHHHh
Confidence            9999988766 46899999997  5777776666654

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.7e-41  Score=306.51  Aligned_cols=317  Identities=23%  Similarity=0.334  Sum_probs=261.7

Q ss_pred             cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      .++|+|.|+.|+|++++|+.+++++.+.+.......| +..|.+++|+++++++.+. ++++++|++|+|+++++..++.
T Consensus        17 ~~~d~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~y-p~~g~~~Lr~aia~~~~~~-~v~~d~I~it~G~~~~l~~l~~   94 (334)
T d2f8ja1          17 EKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYLDTD-FLSKNNVSVGNGADEIIYVMML   94 (334)
T ss_dssp             CCCCSEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSC-CCSSCHHHHHHHHHHHTCS-SCCGGGEEEEEHHHHHHHHHHH
T ss_pred             cCCCceEEECCCCCCCCCHHHHHHHHHHhhcchhcCC-CCCCcHHHHHHHHHHhccc-CCCcceEEecCcchhHHHHHhh
Confidence            4689999999999999999999999999887644445 7789999999999998654 5889999999999999887655


Q ss_pred             HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (400)
Q Consensus       108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~  187 (400)
                          +||+|++++|+|+++...++..|++++.+ |.++++...+      ...++  .+++++++|+||||.+++.+++.
T Consensus        95 ----~~d~v~i~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~------~~~~~--~~~l~l~nP~NPtG~~~s~~~l~  161 (334)
T d2f8ja1          95 ----MFDRSVFFPPTYSCYRIFAKAVGAKFLEV-PLTKDLRIPE------VNVGE--GDVVFIPNPNNPTGHVFEREEIE  161 (334)
T ss_dssp             ----HSSEEEECSSCCHHHHHHHHHHTCCEEEC-CCCTTSCCCC------CCCCT--TEEEEEESSCTTTCCCCCHHHHH
T ss_pred             ----hccccccccccccccccchhccCCccccc-cccccccccc------ccccc--ceEEEecccccccceeecHHHhh
Confidence                46999999999999999999999999999 9887653221      12234  49999999999999999966655


Q ss_pred             HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768          188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  267 (400)
Q Consensus       188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~  267 (400)
                      ++    .++++++|+||+|..+............+++++++|+||.++++|+|+||++.+   +++++++.....  .++
T Consensus       162 ~~----~~~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~---~~~i~~l~~~~~--~~~  232 (334)
T d2f8ja1         162 RI----LKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS---EKFIDAYNRVRL--PFN  232 (334)
T ss_dssp             HH----HTTTCEEEEECTTGGGTCCCCGGGGGTCSSEEEEEESTTTSSCTTTCEEEEEEC---HHHHHHHHHHSC--TTC
T ss_pred             cc----ccceeEEeecccchhhcccccccccccCceEEEEecCccccchhhhhhhhcccc---hHHHHHHHHhhc--ccc
Confidence            43    358999999999988766555555556789999999999999999999999998   899999988764  556


Q ss_pred             ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768          268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  347 (400)
Q Consensus       268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  347 (400)
                      .+.+.+.++..++.. .++..+.++.+.++++.+.+.|++++. ++.++. |.|+|+.++..  +.+++++.|+ ++||.
T Consensus       233 ~s~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-g~f~~~~~~~~--~~~~~~~~L~-~~GI~  306 (334)
T d2f8ja1         233 VSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RITDSR-GNFVFVFMEKE--EKERLLEHLR-TKNVA  306 (334)
T ss_dssp             SCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHTC-EECCCC-SSEEEEECCHH--HHHHHHHHHH-HTTEE
T ss_pred             cchhhhhhccccccc-ccchhhHHHHHHHHHHHHHHHHHHCCC-eECCCC-ceEEEEECCCC--CHHHHHHHHH-HCCCE
Confidence            788888888888875 678888999999999999999999875 777776 56889888753  5677888775 78999


Q ss_pred             EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          348 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       348 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      +++     .++++|||++  +.+|.++++++|++
T Consensus       307 vr~-----~~~~vRis~g--~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         307 VRS-----FREGVRITIG--KREENDMILRELEV  333 (334)
T ss_dssp             CEE-----ETTEEEEECC--CHHHHHHHHHHHHH
T ss_pred             ECC-----CCCeEEEEcC--CHHHHHHHHHHHhc
Confidence            975     3689999997  47777777777654

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=8.2e-41  Score=314.13  Aligned_cols=349  Identities=16%  Similarity=0.121  Sum_probs=270.4

Q ss_pred             HHHHHHH-hcC-CCeEEcCCCC---CCC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC
Q 015768           20 VQIQELV-RGA-KNAVSLAQGV---VYW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS   90 (400)
Q Consensus        20 ~~~~~~~-~~~-~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~   90 (400)
                      ..+.+.+ ++. ++.|+|+.|.   +..  +..+.|.++..+...++....|++..|.+++|+++++++.+.++.  +++
T Consensus        16 ~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~   95 (401)
T d7aata_          16 LGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSG   95 (401)
T ss_dssp             HHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT
T ss_pred             HHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCcccCcC
Confidence            3454544 333 4589999994   333  345788888888887765668999999999999999999888764  366


Q ss_pred             cEEEeCCh-----HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhcc-CC
Q 015768           91 SVMVTAGA-----NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLET-KP  163 (400)
Q Consensus        91 ~i~~~~g~-----t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~-~~  163 (400)
                      .++.+.++     ..++..++.++++|||+|++++|+|+++...++..|++++.+ |.. ++++..+.+.+.+.+.. .+
T Consensus        96 ~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  174 (401)
T d7aata_          96 RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY-RYYDPKTCSLDFTGAMEDISKIPE  174 (401)
T ss_dssp             CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTSCT
T ss_pred             ceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEE-eccccccccccHHHHHHHHhcCCC
Confidence            67665443     246777788899999999999999999999999999999999 874 44567788888877752 23


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-------cCCCcEEEEeccccccCC
Q 015768          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-------VEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-------~~~~~~i~~~s~sK~~g~  236 (400)
                      ..+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++.....       ...+..+++.|+||.+++
T Consensus       175 ~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~  254 (401)
T d7aata_         175 KSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGL  254 (401)
T ss_dssp             TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCC
T ss_pred             ceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEecccccee
Confidence            3488899999999999999999999999999999999999999999987643211       234667888999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHH----HhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHhc
Q 015768          237 MGWRVGYIAYPSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      +|+|+||++.+....+...++.    ........+++.+.+.++...+...      .++.+.+++++.++++.+.+.|+
T Consensus       255 ~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~  334 (401)
T d7aata_         255 YGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK  334 (401)
T ss_dssp             GGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998853322222222    1222334566788888888887752      14456777888889999999999


Q ss_pred             cCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          307 PLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       307 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      +++.   +.+..+++|+|+|+.++      .+++++|++++||.+.||.        |||++.+++++++.++++|.+++
T Consensus       335 ~~~~~~~~~~~~~~~G~F~~~~ls------~e~~~~L~~e~gV~~~pg~--------Ris~a~~~~~~i~~la~ai~~v~  400 (401)
T d7aata_         335 KEGSSHNWQHITDQIGMFCFTGLK------PEQVERLTKEFSIYMTKDG--------RISVAGVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             HTTCCSCCHHHHHCCSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             HhCCCCCcceECCCCeEEEecCCC------HHHHHHHHHhCCEEECCCc--------EEEeccCCHHHHHHHHHHHHHHh
Confidence            8754   34567888999998764      3567889899999999985        99998878888888888887765

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=2.8e-39  Score=304.32  Aligned_cols=362  Identities=17%  Similarity=0.149  Sum_probs=271.9

Q ss_pred             HhhhcCchHHHHHHHHHhcC--CCeEEcCCCC---CCC--CCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHH
Q 015768           10 RALETEMPIMVQIQELVRGA--KNAVSLAQGV---VYW--QPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKKL   81 (400)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~~~~~~a~~l   81 (400)
                      ++..........+.+.|+.+  ++.|+|+.|.   ++.  +..+.|.++......+ .....|++..|.+++|+++++++
T Consensus         7 ~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~   86 (412)
T d1yaaa_           7 NIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKII   86 (412)
T ss_dssp             TCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHH
T ss_pred             cCCcCCCChHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHHH
Confidence            45555544556777777654  4479999993   333  2346777765554433 23567999999999999999999


Q ss_pred             HhhcCC--CCCcEEEe--CChHHHHHHHH--HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHH
Q 015768           82 NQENKL--YKSSVMVT--AGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADW  154 (400)
Q Consensus        82 ~~~~~~--~~~~i~~~--~g~t~a~~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~  154 (400)
                      .+.++.  ..+.++.+  .+++.++..++  ..+..|||.|++++|+|+.+...++..|++++.+ |.. ++++..+.+.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~-~~~~~~~~~~~~~~  165 (412)
T d1yaaa_          87 FGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATY-PYWANETKSLDLNG  165 (412)
T ss_dssp             HCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEE-ECEETTTTEECHHH
T ss_pred             hcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecc-cccccccccccchh
Confidence            887763  23333332  34444444443  3456899999999999999999999999999988 764 4456678888


Q ss_pred             HHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc----------ccCCCc
Q 015768          155 LEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----------CVEGDH  223 (400)
Q Consensus       155 l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~----------~~~~~~  223 (400)
                      ++..+... +..+++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++....          ....+.
T Consensus       166 ~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~  245 (412)
T d1yaaa_         166 FLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSP  245 (412)
T ss_dssp             HHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCC
T ss_pred             hhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCC
Confidence            88777632 2247788889999999999999999999999999999999999999998764221          123577


Q ss_pred             EEEEeccccccCCCcceeEEEEccCCcHH----HHH----HHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHH
Q 015768          224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEG----FAT----QLLKVQDNIPICASIISQHLALYSLQTG------PEWVTE  289 (400)
Q Consensus       224 ~i~~~s~sK~~g~~g~~~G~i~~~~~~~~----~~~----~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~  289 (400)
                      .+++.|+||.++++|+|+||++.+....+    ..+    ...........+++.+.|.++..++...      .++++.
T Consensus       246 ~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~  325 (412)
T d1yaaa_         246 VFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVT  325 (412)
T ss_dssp             EEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             eEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHHHHH
Confidence            89999999999999999999988853211    111    1222233456678899999988888762      245677


Q ss_pred             HHHHHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768          290 RVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  366 (400)
Q Consensus       290 ~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~  366 (400)
                      +++.++++++.+.+.|++++.   +.+..+++|+|.|+.++      .+++++|++++||.+.||.        ||+++.
T Consensus       326 ~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls------~e~~~~L~~e~~V~~~~g~--------Ris~~g  391 (412)
T d1yaaa_         326 MSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT------PQMVKRLEETHAVYLVASG--------RASIAG  391 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC------HHHHHHHHHHHCEECCTTS--------EEEGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCceeCCCceEEEecCcC------HHHHHHHHHhCCEEECCCC--------EEEecc
Confidence            788888999999999988754   45667888999997764      3678889899999999875        999987


Q ss_pred             CCHHHHHHHHHHHHHHHHHH
Q 015768          367 LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       367 ~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++++.++.+.++|+++++.+
T Consensus       392 ~~~~~i~~l~~ai~~v~k~~  411 (412)
T d1yaaa_         392 LNQGNVEYVAKAIDEVVRFY  411 (412)
T ss_dssp             CCTTTHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHhh
Confidence            78888999999998888754

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=7e-39  Score=301.94  Aligned_cols=362  Identities=16%  Similarity=0.161  Sum_probs=268.5

Q ss_pred             hhhcCchHHHHHHHHHhcC--CCeEEcCCC---CCCC--CCcHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHHH
Q 015768           11 ALETEMPIMVQIQELVRGA--KNAVSLAQG---VVYW--QPPKMAMEKVKELVWDP-SISKYGADEGLPELRDALVKKLN   82 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~--~~~i~~~~~---~~~~--~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~~~~~~a~~l~   82 (400)
                      ++.........+...|+.+  ++.|+|+.|   +.+.  +..+.|.++......+. ....|++..|.+++|+++++++.
T Consensus         9 ~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~~~~   88 (412)
T d1ajsa_           9 VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLAL   88 (412)
T ss_dssp             CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             CCcCCCChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHHHHh
Confidence            4444444556677766554  568999999   3333  33466777665554433 35579999999999999999998


Q ss_pred             hhcCC--CCCc--EEEeCChHHHHHHHHHHh-------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCC
Q 015768           83 QENKL--YKSS--VMVTAGANQAFVNIVLTL-------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHP  150 (400)
Q Consensus        83 ~~~~~--~~~~--i~~~~g~t~a~~~~~~~l-------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~  150 (400)
                      +..+.  +.+.  ++.+++++.++..+..++       .+|||+|++++|+|+++...++..|++.+.+.+. +++++..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~~~  168 (412)
T d1ajsa_          89 GDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGL  168 (412)
T ss_dssp             CTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEE
T ss_pred             ccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccccc
Confidence            77753  3444  455666666666555543       6899999999999999999999999876554133 3444567


Q ss_pred             CHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-------ccCCC
Q 015768          151 DADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-------CVEGD  222 (400)
Q Consensus       151 ~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-------~~~~~  222 (400)
                      |.+.+++.+. .....+++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++....       ....+
T Consensus       169 d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~  248 (412)
T d1ajsa_         169 DLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGF  248 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred             cHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhhcc
Confidence            8777777654 222348888889999999999999999999999999999999999999988764321       12356


Q ss_pred             cEEEEeccccccCCCcceeEEEEccCCcHHHHHHH----HHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG------PEWVTERVK  292 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~  292 (400)
                      ..+++.|+||.++++|+|+||++.+....+..+++    .........+++.+.+.++...+...      .++++.+++
T Consensus       249 ~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (412)
T d1ajsa_         249 ELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMAD  328 (412)
T ss_dssp             CEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            78889999999999999999998885332222222    22223344566778887777776641      244667788


Q ss_pred             HHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCH
Q 015768          293 DLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE  369 (400)
Q Consensus       293 ~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~  369 (400)
                      ++.++++.+.+.|++++.   +.++.+++|+|.|+.++      .+++.+|++++||++.||.        ||+++..++
T Consensus       329 ~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls------~~~v~~L~~e~gV~~vpg~--------Ri~~ag~~~  394 (412)
T d1ajsa_         329 RILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN------PKQVEYLINQKHIYLLPSG--------RINMCGLTT  394 (412)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC------HHHHHHHHHTTCEECCTTS--------EEEGGGCCT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCCC------HHHHHHHHHhCCEEEeCCC--------eEEeccCCH
Confidence            888899999999998754   34456777999997664      3556778889999999975        999987788


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 015768          370 DDCKAAADRLRRGLEEL  386 (400)
Q Consensus       370 ~~~~~~~~~l~~~l~~~  386 (400)
                      ++++.++++|.++++++
T Consensus       395 ~~i~~~a~aI~~av~~~  411 (412)
T d1ajsa_         395 KNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             TTHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999999875

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.5e-40  Score=307.57  Aligned_cols=348  Identities=18%  Similarity=0.130  Sum_probs=263.1

Q ss_pred             HHHHHH-hc-CCCeEEcCCCC---CCC--CCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC
Q 015768           21 QIQELV-RG-AKNAVSLAQGV---VYW--QPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKKLNQENKL--YKS   90 (400)
Q Consensus        21 ~~~~~~-~~-~~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~   90 (400)
                      .+.+.| ++ .++.|+|+.|.   +..  +.++.|.+|..+.... .....|++..|.+++|+++++++.+.++.  +++
T Consensus        15 ~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~   94 (397)
T d3tata_          15 TLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQ   94 (397)
T ss_dssp             THHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHHTCSSCHHHHTT
T ss_pred             HHHHHHhcCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHHhhccCCcCCcC
Confidence            344444 33 35579999993   333  3346777776655433 23567999999999999999999888764  477


Q ss_pred             cEEEeCChHHH----HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhcc-CCC
Q 015768           91 SVMVTAGANQA----FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLET-KPT  164 (400)
Q Consensus        91 ~i~~~~g~t~a----~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~-~~~  164 (400)
                      +++.+.+++.+    +..++..+..|||+|++++|+|+++...++..|.+++.+ |.+.+ ++..+.+.+.+.+.. ...
T Consensus        95 ~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~  173 (397)
T d3tata_          95 RVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTY-PWYDEATNGVRFNDLLATLKTLPAR  173 (397)
T ss_dssp             CEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEEC-CCCCTTTSSCCHHHHHHHHTTCCSS
T ss_pred             cEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEE-ecchhhccccchHHHHHHhhhcccc
Confidence            88887666554    555666667999999999999999999999999999999 87654 466788887776652 223


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc------ccCCCcEEEEeccccccCCCc
Q 015768          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC------CVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~------~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      .+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++....      ....++.+++.|+||.++++|
T Consensus       174 ~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G  253 (397)
T d3tata_         174 SIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYG  253 (397)
T ss_dssp             CCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBCCHHHHTBTT
T ss_pred             cEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEecCcccccccC
Confidence            47888889999999999999999999999999999999999999988643211      123567899999999999999


Q ss_pred             ceeEEEEccCCcHHHHHHH----HHhhccCCcCccHHHHHHHHHHhcCCc------HHHHHHHHHHHHHHHHHHHHhccC
Q 015768          239 WRVGYIAYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREIIREALSPL  308 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~  308 (400)
                      +|+||++.+....+...++    .........+++...+.++...+....      ++.+.++++++++++.+.+.|+.+
T Consensus       254 ~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  333 (397)
T d3tata_         254 ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTE  333 (397)
T ss_dssp             TCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998875332222222    223334455667788888777776521      344556677777888888888875


Q ss_pred             CC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          309 GE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       309 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      ..   +.+..+.+|+|+|+.++      .+++++|++++||.+.||.        ||+++.+++++++.++++|++++
T Consensus       334 ~~~~~~~~~~~~~G~F~~~~ls------~e~~~~L~~e~~V~l~~g~--------Ri~~a~~~~~~i~~~~~ai~~v~  397 (397)
T d3tata_         334 MPERNFDYLLNQRGMFSYTGLS------AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAAVM  397 (397)
T ss_dssp             CTTSCTTHHHHCCSSBCCCCCC------HHHHHHHTTTTCEECCSSS--------CCBTTSCCTTTHHHHHHHHHHHC
T ss_pred             CCCCceEEEcCCCceEEecCcC------HHHHHHHHHhCCEEeCCCC--------EEEeccCCHHHHHHHHHHHHHhC
Confidence            42   45667888999998875      3567889889999999975        99998878899998888887753

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-39  Score=301.71  Aligned_cols=351  Identities=15%  Similarity=0.154  Sum_probs=256.6

Q ss_pred             HHHHHHHHHhc--CCCeEEcCCC---CCC--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--
Q 015768           18 IMVQIQELVRG--AKNAVSLAQG---VVY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--   88 (400)
Q Consensus        18 ~~~~~~~~~~~--~~~~i~~~~~---~~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--   88 (400)
                      ....+.+.|..  .++.|+|+.|   ++.  .+.++.|.+++.+...++..+.|++..|.+++|+++++++.++++..  
T Consensus        12 ~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~   91 (396)
T d2q7wa1          12 PILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALIN   91 (396)
T ss_dssp             ----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             hHHHHHHHHhccCCCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHhhcCCccc
Confidence            33455555433  3557999999   333  24568888988888777666789999999999999999998887642  


Q ss_pred             CCc--EEEeCChHHHHHHHHH--HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc-cC
Q 015768           89 KSS--VMVTAGANQAFVNIVL--TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE-TK  162 (400)
Q Consensus        89 ~~~--i~~~~g~t~a~~~~~~--~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~-~~  162 (400)
                      ++.  ++.+.+++.++..++.  +...+||.|++++|+|+++...++..|++++.+ |... +++..+.+.+.+... ..
T Consensus        92 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  170 (396)
T d2q7wa1          92 DKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREY-AYYDAENHTLDFDALINSLNEAQ  170 (396)
T ss_dssp             TTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTCC
T ss_pred             ccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEec-ccccccccccccchHHHHHHHhc
Confidence            333  3456666656555544  446899999999999999999999999999998 7653 344556666666554 23


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc------ccCCCcEEEEeccccccCC
Q 015768          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC------CVEGDHVVNLFSFSKAYGM  236 (400)
Q Consensus       163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~------~~~~~~~i~~~s~sK~~g~  236 (400)
                      .+.+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++....      ....+..+++.|+||.+++
T Consensus       171 ~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~  250 (396)
T d2q7wa1         171 AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGL  250 (396)
T ss_dssp             TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTC
T ss_pred             cCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccc
Confidence            3347888889999999999999999999999999999999999999988753221      1135677888999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHHH----hhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHhc
Q 015768          237 MGWRVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       237 ~g~~~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      +|+|+||++.+....+.......    .......+++...+.++...+...      .++++.++++++++++.+.+.|+
T Consensus       251 ~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~  330 (396)
T d2q7wa1         251 YNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQ  330 (396)
T ss_dssp             GGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
T ss_pred             cCCCccccccchhHHHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998533222222221    122334566777788777777642      25567778888999999999999


Q ss_pred             cCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          307 PLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       307 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      +++.   +.+..+++|+|.|+.++      .+++++|++++||.+.||+        ||+++.+++++++.++++|++++
T Consensus       331 ~~~~~~~~~~~~~~~G~F~~~~l~------~e~~~~L~~e~gV~~~~g~--------Ri~~a~l~~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         331 EKGANRDFSFIIKQNGMFSFSGLT------KEQVLRLREEFGVYAVASG--------RVNVAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             HTTCCSCCTHHHHCCSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             HhCCCCCcceecCCCeEEEeeCCC------HHHHHHHHHhCCEEECCCC--------EEEecCCCHHHHHHHHHHHHHhC
Confidence            8764   34456667999998775      3567889889999999876        99998878888988888887763

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=4.9e-38  Score=294.61  Aligned_cols=357  Identities=14%  Similarity=0.127  Sum_probs=262.3

Q ss_pred             hhhcCchHHHHHHHHHhcC--CCeEEcCCCC---CCC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768           11 ALETEMPIMVQIQELVRGA--KNAVSLAQGV---VYW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~   83 (400)
                      +++.......++.+.|+.+  ++.|+|+.|.   .+.  +.++.|.+++.+...++....|++..|.+++|+++++++.+
T Consensus         5 ~~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~~   84 (394)
T d2ay1a_           5 LKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILG   84 (394)
T ss_dssp             CCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHG
T ss_pred             CCCCCCChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhc
Confidence            3444434445566655433  4589999993   222  34688999988888766566899999999999999999987


Q ss_pred             hcCCC-CCcEEEeCChHHH--HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768           84 ENKLY-KSSVMVTAGANQA--FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (400)
Q Consensus        84 ~~~~~-~~~i~~~~g~t~a--~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l  159 (400)
                      ..+.. ....+++++++.+  +...+..+.++||.|++++|+|+++...++..|++++.+ |..+ +++..+.+.+++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~  163 (394)
T d2ay1a_          85 DGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTY-RYFDAETRGVDFEGMKADL  163 (394)
T ss_dssp             GGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEE-ECEETTTTEECHHHHHHHH
T ss_pred             cccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEe-cccchhcccccchhHHHHH
Confidence            77543 3444455444444  555556677999999999999999999999999999988 6643 34455666666665


Q ss_pred             cc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc------cCCCcEEEEecccc
Q 015768          160 ET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC------VEGDHVVNLFSFSK  232 (400)
Q Consensus       160 ~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~------~~~~~~i~~~s~sK  232 (400)
                      .. .+..+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++.....      ......+++.|+||
T Consensus       164 ~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk  243 (394)
T d2ay1a_         164 AAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSK  243 (394)
T ss_dssp             HTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTT
T ss_pred             hhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcccccccccccc
Confidence            52 222467777799999999999999999999999999999999999999887533211      13456788899999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHH----HHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHH
Q 015768          233 AYGMMGWRVGYIAYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       233 ~~g~~g~~~G~i~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~  302 (400)
                      .++++|+|+||++.+....+.....    .........+++...+..+...+...      .++++.+++++.++++.+.
T Consensus       244 ~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~l~  323 (394)
T d2ay1a_         244 NFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLA  323 (394)
T ss_dssp             TTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCcccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998885322222222    22222334455666666666666541      1445667788888899999


Q ss_pred             HHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768          303 EALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  379 (400)
Q Consensus       303 ~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  379 (400)
                      +.|++++.   +.+..+++|+|+|+.++      .+++++|++++||.+.||.        ||+++.+++++++.+.++|
T Consensus       324 ~~L~~~~~~~~~~~~~~~~G~F~~~~ls------~~~~~~L~~~~~V~~~~g~--------Ri~~a~l~~~~i~~l~~ai  389 (394)
T d2ay1a_         324 GELRDLSGSDRFGFVAEHRGMFSRLGAT------PEQVKRIKEEFGIYMVGDS--------RINIAGLNDNTIPILARAI  389 (394)
T ss_dssp             HHHHHHHTSSTTTHHHHCCSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHH
T ss_pred             HHHHHhCCCCceeeECCCceeEEecCcC------HHHHHHHHHhCCEEecCCC--------EEEecCCCHHHHHHHHHHH
Confidence            99988643   35567888999998774      3567889889999999975        9999887888888777777


Q ss_pred             HHH
Q 015768          380 RRG  382 (400)
Q Consensus       380 ~~~  382 (400)
                      .++
T Consensus       390 ~~v  392 (394)
T d2ay1a_         390 IEV  392 (394)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            654

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=4.9e-36  Score=279.85  Aligned_cols=326  Identities=17%  Similarity=0.119  Sum_probs=245.2

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhc-CC-CCCCCCCCC----CcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVW-DP-SISKYGADE----GLPELRDALVKKLNQENKL--YKSSVMVTAGANQAF  102 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~-~~-~~~~y~~~~----g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~  102 (400)
                      -.+++++|+|.+..|--...+...+.. .+ ...+|....    -.++|++.+++......+.  +..+|++++|+++++
T Consensus        57 ~~~~~~~gdp~~~~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~Gsteli  136 (425)
T d2hoxa1          57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLI  136 (425)
T ss_dssp             CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHH
T ss_pred             ceeeCCCCCCCCCCHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEECCCHHHHH
Confidence            368888998887533333333333322 22 133454332    2378999999977666654  345799999999999


Q ss_pred             HHHHHHh--------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768          103 VNIVLTL--------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG  174 (400)
Q Consensus       103 ~~~~~~l--------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~  174 (400)
                      +.++.+|        .+|||+|+++.|+|+.+....+..+.....+        .+|.+.+++.+++++  +++++++||
T Consensus       137 ~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~~--------~~D~~~~~~~~~~~~--~ii~l~sPn  206 (425)
T d2hoxa1         137 HGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQ--YIEMVTSPN  206 (425)
T ss_dssp             HHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGG--EEEEEESSC
T ss_pred             HHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCcc--------CCCHHHHHhhCCCCc--eEEEEECCC
Confidence            9999999        4689999999999999998888888765444        446777777776665  999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  254 (400)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~  254 (400)
                      ||||.+..          +..+++.+|.||+|.+..+...   ....+++++++|+||.+|++|+|+||++.++  +.++
T Consensus       207 NPtG~l~~----------~v~~~~~~I~DEaY~~~~f~~~---~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~--~~i~  271 (425)
T d2hoxa1         207 NPEGLLRH----------AVIKGCKSIYDMVYYWPHYTPI---KYKADEDILLFTMSKFTGHSGSRFGWALIKD--ESVY  271 (425)
T ss_dssp             TTTCCCCC----------CSSTTCEEEEECTTCSTTTSCC---CSCBCCSEEEEEHHHHTSCGGGCCEEEEECC--HHHH
T ss_pred             CCCcchhh----------hhhhCCEEEEeccccCccccch---hhhcCCeEEEEeCHHhccCcchheeeEEeCC--HHHH
Confidence            99998743          1246899999999975444321   2235678999999999999999999987775  7888


Q ss_pred             HHHHHhhccCCcCccHHHHHHHHHHhcC-----------CcHHHHHHHHHHHHHHHHHHHHhccCCCCc-----------
Q 015768          255 TQLLKVQDNIPICASIISQHLALYSLQT-----------GPEWVTERVKDLVRNREIIREALSPLGEGA-----------  312 (400)
Q Consensus       255 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-----------  312 (400)
                      +++.......+.+++.++|.++..+|+.           ..+++...++.++++++++.+.|++.+.+.           
T Consensus       272 ~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~  351 (425)
T d2hoxa1         272 NNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCN  351 (425)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEET
T ss_pred             HHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCcccee
Confidence            8888887777888999999998888853           224566777888889999999998765421           


Q ss_pred             ---ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          313 ---VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       313 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                         ...+..+.|.|+++...   ..+.+.++++++||.++||..|+. ++++|||+.. ++|++++++++|++++++
T Consensus       352 f~~~~~~~~~~f~wl~~~~~---~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~-~~e~ld~~l~rL~~~v~a  424 (425)
T d2hoxa1         352 YFRRMRPPSPSYAWVKCEWE---EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVKA  424 (425)
T ss_dssp             TTTEEECCCCSEEEEEECSG---GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHHTC
T ss_pred             eeeeccCCCcceeeeeCCCC---hHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence               11233456788887642   334455667799999999999974 7899999986 899999999999998853

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.6e-29  Score=236.18  Aligned_cols=336  Identities=15%  Similarity=0.123  Sum_probs=232.8

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCC--Cc------HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADE--GL------PELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~--g~------~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      |.|+.+.. -+.++.|+++|.+++.+..  .|+.+.  ..      .++.+++.+.+++.+|+++++|++++|+|++++.
T Consensus         4 iYlD~aa~-~p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~   80 (391)
T d1p3wa_           4 IYLDYSAT-TPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL   80 (391)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred             EEeeCccc-cCCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHH
Confidence            45555432 3678999999999987532  232211  11      2333344445555559999999999999999999


Q ss_pred             HHHHh----cCCCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768          105 IVLTL----CDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (400)
Q Consensus       105 ~~~~l----~~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt  177 (400)
                      ++.++    .++||+|++.++.|++....+   +..|+++..+ |.++++ .+|++.+++.+++++  ++|++++++|||
T Consensus        81 ~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~~-~~d~~~~~~~i~~~T--~lv~is~~~n~t  156 (391)
T d1p3wa_          81 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-APQRNG-IIDLKELEAAMRDDT--ILVSIMHVNNEI  156 (391)
T ss_dssp             HHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEE-CCCTTS-CCCHHHHHHHCCTTE--EEEECCSBCTTT
T ss_pred             HHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEe-CCCCCC-eEcHHHHHHhCCCCc--EEEEEECCCCCC
Confidence            98876    479999999999998876544   4569999999 887665 579999999999887  999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      |.++|   +++|.++|++||+++++|++|+.+..   +......+.++++.|.+|++|.+|  +|++..+.   +.....
T Consensus       157 G~~~~---~~~I~~~~~~~~~~~ivD~~~~~g~~---~~d~~~~~~D~~~~s~~k~~g~~g--~g~~~~~~---~~~~~~  225 (391)
T d1p3wa_         157 GVVQD---IAAIGEMCRARGIIYHVDATQSVGKL---PIDLSQLKVDLMSFSGHKIYGPKG--IGALYVRR---KPRVRI  225 (391)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTBTTB---CCCTTTSCCSEEEEESTTTTSCSS--CEEEEECB---TTBCCC
T ss_pred             eeECC---HHHHHHHhccCCcEEEEeeccccCCc---cccchhccccccccccccccCCCc--eEEEEEec---chhccc
Confidence            99999   88999999999999999999985432   333334566788899999997555  57766663   222222


Q ss_pred             HHhh-------ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--C-CCceEEEeeCC
Q 015768          258 LKVQ-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--G-EGAIYLWARLP  327 (400)
Q Consensus       258 ~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~-~~~~~~~~~~~  327 (400)
                      ....       .....+.+.....++...+....+......++++++...+.+.|..++...+..  + .....+.+.++
T Consensus       226 ~~~~~gg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  305 (391)
T d1p3wa_         226 EAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN  305 (391)
T ss_dssp             CCSSCSSCTTTTTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEET
T ss_pred             CCcccCCccccCcccCcchhhhhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEEEeC
Confidence            1111       112233444444444444443234455566777888889999998877633221  1 11233344444


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .  .+.+.+...+   .++.++.|..|..                   ++.+|||++. +|++|++.+++.|++++.+++
T Consensus       306 ~--~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr  380 (391)
T d1p3wa_         306 Y--VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLR  380 (391)
T ss_dssp             T--SCHHHHHHHT---TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CChHHHHHHh---CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3  2466666544   4777777765421                   2569999998 899999999999999999987


Q ss_pred             ccCc
Q 015768          388 KDGM  391 (400)
Q Consensus       388 ~~~~  391 (400)
                      +..+
T Consensus       381 ~~~~  384 (391)
T d1p3wa_         381 DLSP  384 (391)
T ss_dssp             HSCH
T ss_pred             HhCh
Confidence            6544

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.3e-28  Score=230.47  Aligned_cols=338  Identities=14%  Similarity=0.117  Sum_probs=246.3

Q ss_pred             CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC----CCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHH
Q 015768           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD----EGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFV  103 (400)
Q Consensus        29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~  103 (400)
                      +++++.|+.+... +.|+.|++++.+.+.+.........    ....+..++..+.+++..|.. ++++++++|+|++++
T Consensus        20 ~~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~~~~T~~~~   98 (405)
T d1jf9a_          20 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGIN   98 (405)
T ss_dssp             TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHH
T ss_pred             CCCeEEEeCcccc-CCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcccccccCcHHHHHH
Confidence            4567888876544 5789999999888765322111000    111233444445555555754 689999999999999


Q ss_pred             HHHHHh----cCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768          104 NIVLTL----CDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (400)
Q Consensus       104 ~~~~~l----~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n  175 (400)
                      .++.++    .++||+|++....|++....+    +..|++++.+ |.+++| .++++.++.++++++  +++++++.+|
T Consensus        99 ~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~-~~~~~g-~~~~~~~~~~i~~~t--~lv~~~~v~~  174 (405)
T d1jf9a_          99 LVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI-PLNPDG-TLQLETLPTLFDEKT--RLLAITHVSN  174 (405)
T ss_dssp             HHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE-CBCTTS-CBCGGGHHHHCCTTE--EEEEEESBCT
T ss_pred             HHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEE-CCCCCC-cCCHHHHHHhccCCc--EEEEEecCCC
Confidence            988863    478999999999998866554    5669999999 988876 679999999998877  9999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      .+|.+.|   +++|.++|+++|+++++|.+++...   .+......+.++++.|++|++|.+|  +|++..+   ++..+
T Consensus       175 ~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~g~---~~id~~~~~~D~~~~s~hK~~Gp~G--~g~l~v~---~~~~~  243 (405)
T d1jf9a_         175 VLGTENP---LAEMITLAHQHGAKVLVDGAQAVMH---HPVDVQALDCDFYVFSGHKLYGPTG--IGILYVK---EALLQ  243 (405)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTT---SCCCHHHHTCSEEEEEGGGTTSCSS--CEEEEEC---HHHHT
T ss_pred             cccccCc---hHHhhhHHHHcCCeeecccceeccc---cccchhhcCCceeeccccccccCCC--ceeeeec---hhhhc
Confidence            9999999   9999999999999999999998432   2333334567799999999987555  6888877   56554


Q ss_pred             HHHHhh----------------------ccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768          256 QLLKVQ----------------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGA  312 (400)
Q Consensus       256 ~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (400)
                      .+....                      .....+.+.....++..+++...+ ..+...++...+.+.+.+.++..+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~  323 (405)
T d1jf9a_         244 EMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLT  323 (405)
T ss_dssp             TCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred             ccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCccc
Confidence            432211                      011235677777777777764222 245556666777788888898887755


Q ss_pred             ccCCCC-ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------CCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          313 VKGGEG-AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       313 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      ...+.. ...+.+.++.  .+..++...| +++||.++.|..|        +.++.+|||++. +|.+|++.+++.|+++
T Consensus       324 ~~~~~~r~~ivsf~~~~--~~~~~~~~~L-~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i  400 (405)
T d1jf9a_         324 LYGPQNRLGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI  400 (405)
T ss_dssp             EESCTTCCSEEEEEETT--CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ccCCcCcCcEEEEEcCC--CCHHHHHHHH-HHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            544431 3345566654  3577777766 6899999988876        246789999998 9999999999999888


Q ss_pred             HHH
Q 015768          383 LEE  385 (400)
Q Consensus       383 l~~  385 (400)
                      .+-
T Consensus       401 ~r~  403 (405)
T d1jf9a_         401 HRL  403 (405)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.97  E-value=7.5e-29  Score=230.77  Aligned_cols=331  Identities=15%  Similarity=0.090  Sum_probs=227.9

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcC---CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~  107 (400)
                      ..+.|+.+... +.|..|++++.+.+..   .....+........+.+++.+.+++.+|+++++|++|+|+|++++.++.
T Consensus         7 ~~~yld~~~~~-~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~~~~~~   85 (381)
T d1elua_           7 NKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLW   85 (381)
T ss_dssp             TSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHH
T ss_pred             CCEEeeCCccc-CCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEECChHHHhhhcch
Confidence            34667665422 4567788888877643   1111121222233445556666666679999999999999999999999


Q ss_pred             Hh-cCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCCCC-HHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          108 TL-CDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       108 ~l-~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~-~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      ++ .++||+|+++++.|++....    .+..|++++.+ |.+++....+ .+.+++.+++++  +++++++++|+||.+.
T Consensus        86 ~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~l~~~i~~~t--~~v~i~~~~n~tG~~~  162 (381)
T d1elua_          86 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF-PVAATLNQGDAAAVLANHLGPKT--RLVILSHLLWNTGQVL  162 (381)
T ss_dssp             HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE-CCGGGSSSSCHHHHHHTTCCTTE--EEEEEESBCTTTCCBC
T ss_pred             hhhhcCCceEEEeccccceeeecccccccccccccccc-ccccccccchHHHHHHhhhcccc--cccccccccccccccc
Confidence            98 58999999999999876554    35578999988 7765543222 566667776665  9999999999999999


Q ss_pred             CHHHHHHHHHHHHHc----CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          182 PERLLKRISDLCKAA----GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~----~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      |   +++|.++|++|    ++++++|++++.+   ..+......+.++++.|++|+++ .+.++|++..+   ++..+++
T Consensus       163 ~---~~~I~~l~~~~~~~~~~~~~vD~~~~~g---~~~~~~~~~~~D~~~~s~~K~~~-~p~G~g~l~~~---~~~~~~~  232 (381)
T d1elua_         163 P---LAEIMAVCRRHQGNYPVRVLVDGAQSAG---SLPLDFSRLEVDYYAFTGHKWFA-GPAGVGGLYIH---GDCLGEI  232 (381)
T ss_dssp             C---HHHHHHHHHHCCSSSCCEEEEECTTTBT---TBCCCTTTSCCSEEEEESSSTTC-CCTTCEEEEEC---TTTGGGC
T ss_pred             h---hhHHHHHHhhcccccccccccccccccc---ccccccccccccccccccccccc-ccchhhHHHhh---HHHHHhc
Confidence            9   77888888875    6999999999843   23333444567899999999996 44557888777   3444433


Q ss_pred             HHhh----------------------ccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768          258 LKVQ----------------------DNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAV  313 (400)
Q Consensus       258 ~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  313 (400)
                      ....                      .....+++.....++..+++...  ...+.+.++..++++++.+.|++++++.+
T Consensus       233 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~  312 (381)
T d1elua_         233 NPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHC  312 (381)
T ss_dssp             CCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred             CcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEe
Confidence            2110                      01122455555555555555311  11244557777888999999999877555


Q ss_pred             cC---CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          314 KG---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       314 ~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      ..   +. +.++++.++.. ...+.+...| +++||.++.   ++.++++|+|++. +|.+|++.+++.|++
T Consensus       313 ~~~~~~~-~~~vsf~~~~~-~~~~~i~~~L-~~~gi~v~~---~~~~~~lRis~~~~nt~edid~ll~~l~e  378 (381)
T d1elua_         313 LATSAPQ-AGLVSFTVDSP-LGHRAIVQKL-EEQRIYLRT---IADPDCIRACCHYITDEEEINHLLARLAD  378 (381)
T ss_dssp             SCSSCCS-SSEEEEEECSS-SCHHHHHHHH-HHTTEECEE---ETTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred             cCCCCcc-ccEEEEEcCCC-CCHHHHHHHH-HhCCcEEEe---cCCCCEEEEecCCCCCHHHHHHHHHHHHh
Confidence            53   33 34566666543 2566777765 589998864   3357899999987 899999999988875

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.7e-28  Score=228.27  Aligned_cols=337  Identities=16%  Similarity=0.088  Sum_probs=242.3

Q ss_pred             cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+.+++|++++ ..+..+|++++++.+++++...+..+.  ..|.....+.+.+.+++.+|  .+.+++++++++|+..
T Consensus        43 dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~g--~e~al~~~SG~~An~~  120 (401)
T d1fc4a_          43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG--MEDAILYSSCFDANGG  120 (401)
T ss_dssp             TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHT
T ss_pred             CCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhhc--CCceEEecchhhhhHH
Confidence            578899998865 667789999999999887643221111  12233333344444444445  5789999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc---c-CCCCeEEEEeCCCCCCccC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---T-KPTPKLVSVVNPGNPSGTY  180 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~---~-~~~~~~v~l~~p~nptG~~  180 (400)
                      ++.++.+++|.|++....|.+....+...+.++..+ +..      |.+++++++.   . .....+|++.+..+..|.+
T Consensus       121 ~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~-~~~------d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~  193 (401)
T d1fc4a_         121 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-ANN------DMQELEARLKEAREAGARHVLIATDGVFSMDGVI  193 (401)
T ss_dssp             THHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEE-CTT------CHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEE
T ss_pred             HHHHhcCCCcEEEeCCcchHHHHccccccCceEEEE-cCC------ChHHHHHHHHHhhhcccCceEEEEcCCCCCCCch
Confidence            999999999999999999999999999999988877 433      5555555543   2 2323566666777788988


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768          181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  255 (400)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~  255 (400)
                      .+   +.++.++|++||+++|+||+|+.+..+...     ......+.+++++|++|++|  |...|++.++   .++++
T Consensus       194 ~~---L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~g~---~~~~~  265 (401)
T d1fc4a_         194 AN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAAR---KEVVE  265 (401)
T ss_dssp             CC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEEC---HHHHH
T ss_pred             hh---hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCcccccCC---HHHHH
Confidence            88   999999999999999999999988776432     12233567799999999994  4445899888   78888


Q ss_pred             HHHHhhc--cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          256 QLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       256 ~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      .+.....  .++...+++...++..+++. ....++.+++++++.+++++.+.+.+. .+.... +.++.+.+.+.. ..
T Consensus       266 ~l~~~~~~~~~s~~l~p~~~~aa~~~l~~-~~~~~~~~~~l~~~~~~~~~~l~~~g~-~~~~~~-~pIv~v~~~~~~-~a  341 (401)
T d1fc4a_         266 WLRQRSRPYLFSNSLAPAIVAASIKVLEM-VEAGSELRDRLWANARQFREQMSAAGF-TLAGAD-HAIIPVMLGDAV-VA  341 (401)
T ss_dssp             HHHHHCHHHHHSCCCCHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHTTC-CBCCSS-SSEEEEEEECHH-HH
T ss_pred             HHHcCChhhhhcCCCCHHHHHHHHhhhcc-cccCHHHHHHHHHHHHHHHhhhcccCC-ccCCCC-CCEEEEEECCHH-HH
Confidence            7764332  23444566666666666663 222367788899999999999998876 444444 344444443211 24


Q ss_pred             HHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      .++.++|+ ++||.+.+-.++.   ....+|++++. +|++|++++++.|+++.+++
T Consensus       342 ~~~~~~L~-~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~l  397 (401)
T d1fc4a_         342 QKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             HHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH-HCCceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            46777776 7899987654432   34569999987 99999999999999998875

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.96  E-value=3.4e-28  Score=223.74  Aligned_cols=333  Identities=14%  Similarity=0.091  Sum_probs=242.2

Q ss_pred             CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      ++++++|++++ ..+..+|+++++..+++++...+..+  ...|...+.+.+++.+++.+|  .+..++++++..|+..+
T Consensus        44 ~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g--~e~all~~sG~~An~~~  121 (396)
T d2bwna1          44 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ--KEAALVFSSAYNANDAT  121 (396)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT--CSEEEEESCHHHHHHHH
T ss_pred             CeEEEEEEcccccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHhC--CCceeeeecchHHHHHH
Confidence            46789999876 77788999999999998763322211  123444455555555555556  47788999999999999


Q ss_pred             HHHh--cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCC
Q 015768          106 VLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       106 ~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~  181 (400)
                      +.++  .+++|.|+...-.|.+..+.++..+++++.+ +.+      |.++++++++  .....++|++....+..|.+.
T Consensus       122 i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f-~Hn------d~~~l~~l~~~~~~~~~~~iv~egvySmdGd~a  194 (396)
T d2bwna1         122 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIF-RHN------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFG  194 (396)
T ss_dssp             HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEE-CTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBC
T ss_pred             HHHHhcccCCCceeehhhhhhccchhhhccccCceEe-ecc------hHHHhhhHHhhhcccCceeEEEEeeccCccccc
Confidence            9988  4688999999999999999999999998888 543      6667776665  222246777778899999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  256 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~  256 (400)
                      |   +.+|.++|++||+++++||+|+.+..+....     .......+++++||+|++|..|   |++.++   +++++.
T Consensus       195 p---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~---~~~i~~  265 (396)
T d2bwna1         195 P---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS---ARMVDA  265 (396)
T ss_dssp             C---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC---HHHHHH
T ss_pred             c---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchh---HHHHHH
Confidence            9   8999999999999999999999888754321     1123456799999999998777   999888   788888


Q ss_pred             HHHhhcc--CCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768          257 LLKVQDN--IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  333 (400)
Q Consensus       257 l~~~~~~--~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (400)
                      +......  ++..++++...++..+++. ..+..++.+..++.+.+++++.|...+. .+.... +..+.+.+.... ..
T Consensus       266 l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~-spIvpv~ig~~~-~~  342 (396)
T d2bwna1         266 VRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGM-PIIDHG-SHIVPVVIGDPV-HT  342 (396)
T ss_dssp             HHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCS-SSCEEEECCCHH-HH
T ss_pred             HHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhcCC-CcCCCC-CCEEEEEeCCHH-HH
Confidence            8765443  3334455555555555553 1233456677788889999999988776 333333 444445554311 24


Q ss_pred             HHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      .++.+.|++++||.+.+..++.   +...+||+++. +|++|+++++++|++.
T Consensus       343 ~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         343 KAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             HHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHh
Confidence            5677777778999987766553   34579999998 9999999999999875

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.96  E-value=1.1e-27  Score=224.38  Aligned_cols=350  Identities=15%  Similarity=0.130  Sum_probs=252.8

Q ss_pred             HHHHHHHHH---h---cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC----CCCCcHHHHHHHHHHHHhhcCC
Q 015768           18 IMVQIQELV---R---GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG----ADEGLPELRDALVKKLNQENKL   87 (400)
Q Consensus        18 ~~~~~~~~~---~---~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~----~~~g~~~~~~~~a~~l~~~~~~   87 (400)
                      +++.+++.|   .   .++++|.|+.+... +.|+.|++++.+.+.+.......    ......++.+...+.+++..|+
T Consensus         3 ~~a~iR~~FP~l~~~~~~~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga   81 (408)
T d1t3ia_           3 LAATVRQDFPILNQEINGHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINA   81 (408)
T ss_dssp             HHHHHGGGCGGGSCEETTEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHhCcccccccCCCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCC
Confidence            445555554   2   24667899887655 47899999998887654221111    1111123444555556666688


Q ss_pred             C-CCcEEEeCChHHHHHHHHHHh----cCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768           88 Y-KSSVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKT  158 (400)
Q Consensus        88 ~-~~~i~~~~g~t~a~~~~~~~l----~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~  158 (400)
                      + ++.++++++++++++.++.++    .++||+|++.+-.|++....+    +..|+.+..+ |.+..+ ..+.+.+++.
T Consensus        82 ~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~-~~~~~~-~~~~~~l~~~  159 (408)
T d1t3ia_          82 RSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV-QLDEQE-SFDLEHFKTL  159 (408)
T ss_dssp             SCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE-CBCTTS-SBCHHHHHHH
T ss_pred             CCcccEEeecchHHHHHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeee-eccccc-cccHHHhhhc
Confidence            7 588999999999999988773    468999999999998866544    4568999888 877665 5689999999


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       159 l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      +++++  ++|.+++.+|.+|..+|   +++|.++|+++|+++++|.+++..   ..+......+.++++.|.+|++|.+|
T Consensus       160 ~~~~t--~lv~i~~~~~~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~g---~~~id~~~~~~D~~~~s~hK~~gp~G  231 (408)
T d1t3ia_         160 LSEKT--KLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAP---HYPLDVQLIDCDWLVASGHKMCAPTG  231 (408)
T ss_dssp             CCTTE--EEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT---TSCCCHHHHTCSEEEEEGGGTTSCTT
T ss_pred             cCCCc--eEEEEecccccccccCc---HHHHhhhhhccCceeeeccceecc---cccccccccCCceEEeccccccCCCC
Confidence            88876  99999999999999999   888999999999999999999843   23333334567899999999986444


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhc---------------------cCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQD---------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVR  296 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~  296 (400)
                        +|++..+   ++....+.....                     ....+.+.+...++..+++...+ ..++..++..+
T Consensus       232 --~g~l~v~---~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  306 (408)
T d1t3ia_         232 --IGFLYGK---EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  306 (408)
T ss_dssp             --CEEEEEC---HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             --ccccccc---hhhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence              6888888   566554422111                     11345677777777777764222 24556667777


Q ss_pred             HHHHHHHHhccCCCCcccCCC-----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEE
Q 015768          297 NREIIREALSPLGEGAVKGGE-----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRIS  363 (400)
Q Consensus       297 ~~~~l~~~L~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~  363 (400)
                      +.+++.+.+++.+...+..+.     .+..+.+.++.  .+.+++...| .++||.++.|..|.        .++.+|||
T Consensus       307 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~--~~~~~v~~~L-~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS  383 (408)
T d1t3ia_         307 LTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG--LHASDVATMV-DQDGIAIRSGHHCTQPLHRLFDASGSARAS  383 (408)
T ss_dssp             HHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT--BCHHHHHHHH-HTTTEECBCSCTTCHHHHHHTTCCCCEEEE
T ss_pred             HHhHHhhhhccCccccccCCCccccCcceEEEEEeCC--CCHHHHHHHH-hhCCcEEecCcccccHHHHhhcCCccEEEE
Confidence            888889999888775544321     13455556654  3677888766 58999999888763        46789999


Q ss_pred             ecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          364 FGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       364 ~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ++. +|++|++.+++.|+++++.+
T Consensus       384 ~~~ynt~~did~li~~L~~~~~~f  407 (408)
T d1t3ia_         384 LYFYNTKEEIDLFLQSLQATIRFF  407 (408)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHh
Confidence            998 99999999999999999865

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.96  E-value=4.9e-29  Score=230.53  Aligned_cols=327  Identities=16%  Similarity=0.141  Sum_probs=205.6

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCC-----CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADE-----GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV  117 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vl  117 (400)
                      ..++++++++.++........|....     ..+.+.+.+.+.+++.+|  .+++++|+|+|+|+..++.++++|||.|+
T Consensus        13 ~l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g--~e~~~~t~g~t~a~~~~~~al~~~gd~Vi   90 (364)
T d2e7ja1          13 KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG--CDVARVTNGAREAKFAVMHSLAKKDAWVV   90 (364)
T ss_dssp             CCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT--SSEEEEESSHHHHHHHHHHHHCCTTCEEE
T ss_pred             cCCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHhC--cCEEEEECcHHHHHHHHHHHHhCCCcEEE
Confidence            35788999988764432111111110     011233444444444446  47899999999999999999999999999


Q ss_pred             EeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccC---CCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015768          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETK---PTPKLVSVVNPGNPSGTYIPERLLKRISDLC  193 (400)
Q Consensus       118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~  193 (400)
                      ++.++|++....++..|++++.+ |.++. .+.+|++++++.+++.   ..+++|++++|+||||.+.|   +++|+++|
T Consensus        91 ~~~~~h~s~~~~~~~~g~~v~~v-~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~I~~ia  166 (364)
T d2e7ja1          91 MDENCHYSSYVAAERAGLNIALV-PKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIAKVC  166 (364)
T ss_dssp             EETTCCHHHHHHHHHTTCEEEEE-CCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHHHHHH
T ss_pred             eecccccccchHHHhccceEEEe-eeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chhheecc
Confidence            99999999999999999999999 87643 4678999999999632   22468889999999999999   88999999


Q ss_pred             HHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--------CC
Q 015768          194 KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------IP  265 (400)
Q Consensus       194 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--------~~  265 (400)
                      ++||+++++|++|+....   +......+.+++++|+||+++.+| ++||++.++   ++.+.+......        ..
T Consensus       167 ~~~~i~livD~a~~~g~~---~~~~~~~g~D~~~~S~~K~~~~~g-~~g~l~~~~---~~~~~~~~~~~~~~~~~~~~~~  239 (364)
T d2e7ja1         167 SEYDVPLLVNGAYAIGRM---PVSLKEIGADFIVGSGHKSMAASG-PIGVMGMKE---EWAEIVLRRSEKYKNKEVELLG  239 (364)
T ss_dssp             HTTTCCEEEECTTTBTTB---CCCHHHHTCSEEEEEHHHHSSCCS-SCEEEEECT---TTTTTTTCBCSSCTTSBGGGTT
T ss_pred             ccccchhhccccchhhhh---hhcccccccceeeeccccccCCCC-CEEEEEECH---HHHHHHHhhccccCcccccccc
Confidence            999999999999974432   222222356789999999998554 789999884   444433221110        01


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCC------CCCHHHHHH
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEK------HLDDFEVVR  338 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~  338 (400)
                      ...+.....++...+....+...... ...++.+++.+.|++++..... .+......++..+..      ......+..
T Consensus       240 ~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (364)
T d2e7ja1         240 CTARGATIITLMASFPHVRERIKRWD-EEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLY  318 (364)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHGGGHH-HHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCeecCCCCCCcceEEEeccchHHHHHHhhccchHHH
Confidence            11222233333333332112222222 2334566777888877652221 122233333333210      001111222


Q ss_pred             HHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          339 WLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       339 ~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..+...++....   ++....+|++.-..+++|++.++++|+++++++
T Consensus       319 ~~l~~~~~~~~~---~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         319 RELKSRKIHGIK---PGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             HHHHHTTEECSC---TTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhcCCceec---CCCcceEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            334467775432   234567788744368999999999999998875

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.4e-28  Score=223.60  Aligned_cols=333  Identities=13%  Similarity=0.092  Sum_probs=238.3

Q ss_pred             cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (400)
Q Consensus        28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~  104 (400)
                      +|+++++|++++ ..+..+|++++++.+++++...+.-+  ...|...+.+++++.+++.+|  .+..+++++++.|+..
T Consensus        36 ~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~g--~e~al~~~SG~~an~~  113 (383)
T d1bs0a_          36 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG--YSRALLFISGFAANQA  113 (383)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHH
T ss_pred             CCeEEEEEEcccccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhcC--CCceEEecccchhhHH
Confidence            467899998875 67777999999999998763221111  123333344444444444446  5788999999999999


Q ss_pred             HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCH
Q 015768          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPE  183 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~  183 (400)
                      ++.++.+++|.|++....|.+.....+..+..++.+ +.      .|++++++.+... ...++|+++.+++++|.+.| 
T Consensus       114 ~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~-~h------nd~~~le~~l~~~~~~~~~vv~e~v~s~~G~i~p-  185 (383)
T d1bs0a_         114 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRF-AH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP-  185 (383)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEE-CT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC-
T ss_pred             HHHhhcCCCceEEeeccccHHHhhccccCCCcceEe-cc------hHHHHHHHHhcccCCCceEEEecCCCCCCCcccc-
Confidence            999999999999999999999999999999998888 53      2888898888632 22467777788999999999 


Q ss_pred             HHHHHHHHHHHHcCCEEEEcccccccccCCCCc---cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768          184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  260 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~  260 (400)
                        +.+|.++|++||+++++||+|+.+..+....   .......++++.+++|++|..|   |++.++   .+.++.++..
T Consensus       186 --l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~G---g~v~~~---~~~~~~l~~~  257 (383)
T d1bs0a_         186 --LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCS---STVADYLLQF  257 (383)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEEC---HHHHHHHHHH
T ss_pred             --hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCCccccccccccccccccc---cccccc---hhHHHHHHhh
Confidence              8888899999999999999999887653321   1112345567889999998766   899888   6777777654


Q ss_pred             hcc--CCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768          261 QDN--IPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  337 (400)
Q Consensus       261 ~~~--~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (400)
                      ...  ++...+++...++..+++.. ....+....++.++..++++.|.+++. .+.+.. +.++.+.+... ....++.
T Consensus       258 ~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~-~~~~~~-s~Ii~v~~g~~-~~a~~~~  334 (383)
T d1bs0a_         258 ARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLADSC-SAIQPLIVGDN-SRALQLA  334 (383)
T ss_dssp             CHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECSCC-SSBCCEEEESH-HHHHHHH
T ss_pred             chhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCC-ccCCCC-CCEEEEEECCH-HHHHHHH
Confidence            332  23344555555555555421 133466777888899999999999886 433333 33333333221 1244677


Q ss_pred             HHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          338 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      +.|+ ++||++.+..++.   +...+|++++. +|++|++++++.|..+
T Consensus       335 ~~L~-~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         335 EKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             HHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHH-HCCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            7776 7999997765443   34579999998 9999999999988764

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.96  E-value=3.6e-29  Score=231.02  Aligned_cols=311  Identities=11%  Similarity=0.027  Sum_probs=216.2

Q ss_pred             hcCC-CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768           27 RGAK-NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (400)
Q Consensus        27 ~~~~-~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~  105 (400)
                      +.+. .++++......++.++...+.+...        +++..+.+.+++..++.+.   +.+.+++++++|+++|+..+
T Consensus        16 ~~g~~~i~~~~gl~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~---~~~~e~~~~~~~~~~a~~~~   84 (366)
T d2aeua1          16 EKGRDALYDLSGLSGGFLIDEKDKALLNTY--------IGSSYFAEKVNEYGLKHLG---GDENDKCVGFNRTSSAILAT   84 (366)
T ss_dssp             HTCGGGCEECSSCCCCCCCCHHHHHHHTST--------THHHHHHHHHHHHHHHHHT---CCTTEEEEEESSHHHHHHHH
T ss_pred             hhccchHhhhccCCCCCCccHHHHHHHHHh--------cCchhhHHHHHHHHHHHcc---CCCccEEEEeCCHHHHHHHH
Confidence            3444 4778877766666666665544221        2223344566666655553   44568899999999999999


Q ss_pred             HHHhcCCCCEEEEe-CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768          106 VLTLCDAGDSVVMF-APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (400)
Q Consensus       106 ~~~l~~~gd~vlv~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~  184 (400)
                      +.++.++++.|+++ .|+|+++...++..|++++..   +      |+|++++.+++++  |+|++.+|+||+  ..+.+
T Consensus        85 l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~---~------d~e~l~~~i~~~t--k~i~~~~p~n~~--~~~~~  151 (366)
T d2aeua1          85 ILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFES---D------KVGEILNKIDKDT--LVIITGSTMDLK--VIELE  151 (366)
T ss_dssp             HHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---S------CHHHHHTTCCTTE--EEEEECBCTTSC--BCCHH
T ss_pred             HHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEECC---C------CHHHHHHhcCCCc--eEEEEEecCCCC--cCCHH
Confidence            99987554545554 589999999999999986544   1      7899999999887  999999998885  45777


Q ss_pred             HHHHHHHHHHHcCCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768          185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  263 (400)
Q Consensus       185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~  263 (400)
                      ++++|+++|++||+++++||+|+.+.++.... .....+.+++++|+||.+  +|+|+||++++   +++++++......
T Consensus       152 ~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~--~g~~~G~i~~~---~~~i~~~~~~~~~  226 (366)
T d2aeua1         152 NFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLM--EGPRGGLLAGK---KELVDKIYIEGTK  226 (366)
T ss_dssp             HHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSS--SSCSCEEEEEE---HHHHHHHHHHHHT
T ss_pred             HHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcCceEEEecccccc--cccceeEEEec---HHHHHHHHHHHhc
Confidence            89999999999999999999998766532211 122335668999999987  48899999999   8999999888777


Q ss_pred             CCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHH----HHHHHHHHhccCCCC--cccCCCCceEEEeeCCCCC----CC
Q 015768          264 IPICASIISQHLALYSLQTGP-EWVTERVKDLVR----NREIIREALSPLGEG--AVKGGEGAIYLWARLPEKH----LD  332 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~----~~~~l~~~L~~~~~~--~~~~~~~~~~~~~~~~~~~----~~  332 (400)
                      ..++++++.++++..+|+... ..+++..+..++    ..+.+......+...  ....+.+..+++.......    .+
T Consensus       227 ~g~~~~~~~~~a~~~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (366)
T d2aeua1         227 FGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKK  306 (366)
T ss_dssp             TTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCCcceeecccC
Confidence            778888899998888887422 112222222221    122223333333221  1222334566665544321    13


Q ss_pred             HHHHHHHHHHhcCeEEeCCCcc-CCCCeEEEEecc
Q 015768          333 DFEVVRWLAHRHGVVVIPGGAC-GCRGHLRISFGG  366 (400)
Q Consensus       333 ~~~~~~~l~~~~gi~v~~g~~~-~~~~~iRi~~~~  366 (400)
                      ..+++.+|++++||.+.||..| +..+++||+++.
T Consensus       307 ~~~~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~~  341 (366)
T d2aeua1         307 LIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTS  341 (366)
T ss_dssp             HHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTS
T ss_pred             HHHHHHHHHHhCCEEEEECCCCCCCCCEEEEeccc
Confidence            4578888999999999999877 467899999986

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=2.1e-26  Score=213.69  Aligned_cols=322  Identities=17%  Similarity=0.136  Sum_probs=212.9

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh----cCCCCE
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL----CDAGDS  115 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l----~~~gd~  115 (400)
                      ++|+.|++++.+++.+...+..+.   .....+..++..+.+++.+|+++++|++++|+|++++.++.++    ..+|+.
T Consensus        12 ~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~~~~~~~~~g~~   91 (376)
T d1eg5a_          12 RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRT   91 (376)
T ss_dssp             CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCE
T ss_pred             cCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHhhhhcccccccccCcc
Confidence            467899999999887642221111   1112233334445555666999999999999999999998753    467888


Q ss_pred             EEEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          116 VVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       116 vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      |++....|+.....   ++..|++++.+ |.++++ .+|++++++++++++  ++|++++++|+||...+   ++++.++
T Consensus        92 v~~~~~~~~~~~~~~~~~~~~g~~v~~v-p~~~~~-~id~~~l~~~i~~~t--~lv~is~v~~~tG~~~~---~~~i~~~  164 (376)
T d1eg5a_          92 IITTPIEHKAVLETMKYLSMKGFKVKYV-PVDSRG-VVKLEELEKLVDEDT--FLVSIMAANNEVGTIQP---VEDVTRI  164 (376)
T ss_dssp             EEECTTSCHHHHHHHHHHHHTTCEEEEC-CBCTTS-CBCHHHHHHHCCTTE--EEEEEESBCTTTCBBCC---HHHHHHH
T ss_pred             cccccccchhhHHHHHHHHhcCCEEEEE-cCCCCC-eECHHHHHHhcCCCc--eEEEEECCccccceeee---ehhhhhh
Confidence            88888888665544   45669999999 988765 789999999999877  99999999999999999   6666666


Q ss_pred             HHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------cc
Q 015768          193 CKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DN  263 (400)
Q Consensus       193 ~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------~~  263 (400)
                      ++.  .++++++|++++..   ..+......+.+++++|++|++|.+|..+.|+....   .    ++...       ..
T Consensus       165 ~~~~~~~~~~~vD~~q~~g---~~~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~~---~----~~p~~~g~~~~~~~  234 (376)
T d1eg5a_         165 VKKKNKETLVHVDAVQTIG---KIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV---P----IRPLIHGGGQERGL  234 (376)
T ss_dssp             HHHHCTTCEEEEECTTTTT---TSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS---C----CCCSBCSSCTTTTT
T ss_pred             hhhcccCceeEEEeeeccc---cccccccccCccceecccceeecCCCceeEEeccCc---c----cCCcccCCCCcccc
Confidence            544  48999999999843   333344455778999999999987787666653321   1    11111       11


Q ss_pred             CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--CCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      .....+..............................++.+.|+.........  ......+.+.++.  .+...+...| 
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L-  311 (376)
T d1eg5a_         235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPN--IRGSTLQNLL-  311 (376)
T ss_dssp             BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTT--CCHHHHHHHH-
T ss_pred             cCCcccchhhhhHHHHhhccccchhhhhhhhhhhhhhhccccccccccccccccccccceeeeccCC--CCHHHHHHHH-
Confidence            1222344444444444432112233444455556677777777655422211  1112334445543  3577777755 


Q ss_pred             HhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768          342 HRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      +++||.++.|..|..                   ++.+|+|++. +|++|++.+++.|++++.
T Consensus       312 ~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         312 SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS  374 (376)
T ss_dssp             HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             hhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence            689999998876532                   1369999998 899999999999999876

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=6.8e-28  Score=220.16  Aligned_cols=329  Identities=15%  Similarity=0.149  Sum_probs=219.2

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD  111 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~  111 (400)
                      +|||..-....| +|++++||.++...  ...|++.+...++++.+++++    |  .+++++++|||+|+..++.++.+
T Consensus         1 ~~~~~~~~~t~p-~p~v~~A~~~a~~g--~~~yg~~p~~~~le~~lA~~~----G--~~~~~~~~sGt~A~~~al~a~~~   71 (343)
T d1m6sa_           1 MIDLRSDTVTKP-TEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF----G--KEAALFVPSGTMGNQVSIMAHTQ   71 (343)
T ss_dssp             CEECSCGGGCCC-CHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHT----T--CSEEEEESCHHHHHHHHHHHHCC
T ss_pred             CcccccccCCCC-CHHHHHHHHhhhcC--CcccCCCHHHHHHHHHHHHHH----C--CCeEEEeCCHHHHHHHHHHHHhc
Confidence            467765544433 68899999776432  345776666777777777766    6  35789999999999999999999


Q ss_pred             CCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEe-CCCCCCccCCCH
Q 015768          112 AGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVV-NPGNPSGTYIPE  183 (400)
Q Consensus       112 ~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~-~p~nptG~~~~~  183 (400)
                      +||.+++..+.|..+..   .....+..+..+ +.+  ....+++.++..+...    ..++.++++ .++++.|.+.+.
T Consensus        72 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (343)
T d1m6sa_          72 RGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPL  148 (343)
T ss_dssp             TTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCH
T ss_pred             cCCceeccccccceeeecccccccccceeecc-ccc--cCccCHHHHHHhhhhhhcccccccccccccccccCCceecCH
Confidence            99999999998865543   233334455544 333  3356888888888732    223444444 568899999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768          184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  261 (400)
Q Consensus       184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~  261 (400)
                      +++.+|.++|++||+++++|+++..+.........  ........+.+.+|..  .|...|+++..   .+.+......+
T Consensus       149 ~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~---~~~~~~~~~~~  223 (343)
T d1m6sa_         149 ENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGL--CAPVGSVVVGD---RDFIERARKAR  223 (343)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTT--CCSSCEEEEEC---HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCeEEEeccccccccccccccchhhhccccccccccccccc--ccccccccccc---HHHHhhhHhhC
Confidence            99999999999999999999999866543211111  1112223344444443  45666887777   56655555444


Q ss_pred             ccCCcCccHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHH
Q 015768          262 DNIPICASIISQHLAL--YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW  339 (400)
Q Consensus       262 ~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (400)
                      .....+.+.....++.  .......    ...+...++..++.+.+.+++......+..++++++.++....+..++++.
T Consensus       224 ~~~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~l~~~  299 (343)
T d1m6sa_         224 KMLGGGMRQAGVLAAAGIIALTKMV----DRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEA  299 (343)
T ss_dssp             HHHTCCCSSTHHHHHHHHHHHHHSS----TTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHH
T ss_pred             cccccccchhHHHHHhhhhhhhhhH----HHHHHHHHHHHHhhhHHHHhccCccCCCCCceEEEEEeCCCcccHHHHHHH
Confidence            3223333222222222  2222111    222334444555556565555534444555788999988765678899998


Q ss_pred             HHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          340 LAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       340 l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      |. ++||.+.+.    .++++|++++. +|+||+++++++|+++++++
T Consensus       300 L~-~~Gi~v~~~----~~~~iRi~~~~~~t~edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         300 LR-NSGVLANAV----SDTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             HH-HHTEECEEE----ETTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HH-HCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            86 889999874    46789999887 89999999999999999986

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-26  Score=213.89  Aligned_cols=334  Identities=15%  Similarity=0.137  Sum_probs=239.9

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcC
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCD  111 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~  111 (400)
                      +-|..|  +.+.+++|+++|....    .. . .+....++.+++.+.+++.+|++.+ .|+++.|+|++++.++..+..
T Consensus        21 ~l~~pG--P~~~~~~Vl~am~~~~----i~-H-Rs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~~   92 (388)
T d1h0ca_          21 LLLGPG--PSNLPPRIMAAGGLQM----IG-S-MSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLE   92 (388)
T ss_dssp             EECSSS--CCCCCHHHHHHHTCCC----CC-T-TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCC
T ss_pred             ccccCC--CCCCCHHHHHHhCcCC----CC-C-CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhhc
Confidence            445554  3346788888774322    22 2 3344567777788888888898754 688889999999999999999


Q ss_pred             CCCEEEEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768          112 AGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (400)
Q Consensus       112 ~gd~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~  188 (400)
                      +|+++++...++++..  ......+..+..+ ..+.. ..++.+.+++.+. .++  +++++++.+|.+|.+.|   +++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~--~~v~~~~~~n~tG~i~p---i~~  165 (388)
T d1h0ca_          93 PGDSFLVGANGIWGQRAVDIGERIGARVHPM-TKDPG-GHYTLQEVEEGLAQHKP--VLLFLTHGESSTGVLQP---LDG  165 (388)
T ss_dssp             SSCCEEECBSSHHHHHHHHHHHHHC--CBCC-BCCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTT
T ss_pred             cCCceeeecccceeeeecccccccccccccc-ccCCc-cccchHHHHHHhccCCc--ceEEEeeeeeccccccC---HHH
Confidence            9999999998887654  3345566666655 44433 3568888877665 344  99999999999999999   899


Q ss_pred             HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------
Q 015768          189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------  261 (400)
Q Consensus       189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------  261 (400)
                      |.++|++||+++++|++++.+   ..+......+.+++++|.+|+++.+ ..+|+++.+   +...+.+....       
T Consensus       166 i~~~~~~~g~~~~vD~~qs~g---~~~~d~~~~~~D~~~~s~~K~~~gp-~g~~~~~~~---~~~~~~~~~~~~~~~~~~  238 (388)
T d1h0ca_         166 FGELCHRYKCLLLVDSVASLG---GTPLYMDRQGIDILYSGSQKALNAP-PGTSLISFS---DKAKKKMYSRKTKPFSFY  238 (388)
T ss_dssp             HHHHHHTTTCEEEEECTTTTT---TSCCCTTTTTCSEEEEESSSTTCCC-TTCEEEEEC---HHHHHHHTTCSSCCSCST
T ss_pred             HHHHhhcccccceeccccccc---cccccccccccceecccccccccCC-CceEEEeec---HHHHHhhhhccccccccc
Confidence            999999999999999999843   3344445567789999999999633 346777776   55555543211       


Q ss_pred             ----------------ccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcccC-C--CCceE
Q 015768          262 ----------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKG-G--EGAIY  321 (400)
Q Consensus       262 ----------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~--~~~~~  321 (400)
                                      .....+++.....++..++....+ ..+.+.++..++.+.+++.++..+...... +  .....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i  318 (388)
T d1h0ca_         239 LDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTV  318 (388)
T ss_dssp             TCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTE
T ss_pred             cccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhcCcccccCCHHHcCCeE
Confidence                            112334566666666666653222 246666777778888888888776533221 1  22345


Q ss_pred             EEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEE-ecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768          322 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEELVKD  389 (400)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~l~~~~~~  389 (400)
                      +.+.+|+. .+..++...|.+++||.+..|..+...+.+||| ++. ++.+|++.++++|+++++++.++
T Consensus       319 ~~~~~p~~-~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~  387 (388)
T d1h0ca_         319 TTVAVPAG-YDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKK  387 (388)
T ss_dssp             EEEECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEECCCC-CCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence            66778765 378899999988889999999877778899999 776 88999999999999999998764

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=5.6e-24  Score=193.79  Aligned_cols=329  Identities=11%  Similarity=0.050  Sum_probs=214.8

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      +++++|++ ++..+++|+|++|+.++.... ...|+..+...++++.++++    +|. +..+++|+|+|+|++.++.++
T Consensus         2 ~~~~~f~s-~n~~g~~P~v~~A~~~a~~~~-~~~~~~~~~~~~l~~~la~~----~g~-~~~v~f~~sGt~An~~a~~~~   74 (345)
T d1v72a1           2 PPALGFSS-DNIAGASPEVAQALVKHSSGQ-AGPYGTDELTAQVKRKFCEI----FER-DVEVFLVPTGTAANALCLSAM   74 (345)
T ss_dssp             CCCCBCSC-GGGCCCCHHHHHHHHHTTSSC-CCSTTCSHHHHHHHHHHHHH----HTS-CCEEEEESCHHHHHHHHHHTS
T ss_pred             CCCcCcCC-CCCCCCCHHHHHHHHHHhccC-ccccCCCHHHHHHHHHHHHH----HCC-CcEEEECCchHHHHHHHHHHH
Confidence            57889986 456678999999998875443 34454444444555555555    475 457999999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC----CCeEE-EEeCCCCCCccCC
Q 015768          110 CDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLV-SVVNPGNPSGTYI  181 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~----~~~~v-~l~~p~nptG~~~  181 (400)
                      +.+++.+++....+..+..   .....+..+..+ +.+.+ ...+++.++..+....    .+.++ +...+.|+.|...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (345)
T d1v72a1          75 TPPWGNIYCHPASHINNDECGAPEFFSNGAKLMT-VDGPA-AKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIY  152 (345)
T ss_dssp             CCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEE-CCCGG-GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCC
T ss_pred             HhcCCccccccccceeeechhhHHHhcCcccccc-ccccc-ccccHHHhhhhhcccccccccccceeeeeeccccccccc
Confidence            9999998888888755443   234455565555 33333 3679999999887432    12333 3345678899999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCC----CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR----KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  257 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l  257 (400)
                      +.+++.++.++|++||+++++|+++..+.....    .......+......+.+|..+ ...+ +.+....  .......
T Consensus       153 ~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~~~~~~  228 (345)
T d1v72a1         153 TLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGV-LAAE-AIVLFNT--SLATEMS  228 (345)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTC-SSCE-EEEESSG--GGHHHHH
T ss_pred             cchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCcccccc-cccc-ccccchh--hhhhhcc
Confidence            999999999999999999999999975543221    111112233344445555442 2222 2233331  1222111


Q ss_pred             H-HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHH
Q 015768          258 L-KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEV  336 (400)
Q Consensus       258 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (400)
                      . ................+....+.  .....+......++..++.+.+.+++++.+..|..+++++++++      .++
T Consensus       229 ~~~~~~~~~~~~~~~aa~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~~~niv~~~~~------~~~  300 (345)
T d1v72a1         229 YRRKRAGHLSSKMRFLSAQIDAYLT--DDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD------SAM  300 (345)
T ss_dssp             HHHHHTTCCCSSTHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC------HHH
T ss_pred             ccccccccccchhhHHhhhhHHHHH--HhhhhhhccchhhHHHHHHHHHHhcCCcEeccCCCccEEEEEcC------HHH
Confidence            1 11222222223333233333333  33345666667778888889999998877777777888888886      356


Q ss_pred             HHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          337 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       337 ~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      ++.|+ ++||.+.++.  ..++.+||+++. +|+||++.+++.|+++
T Consensus       301 ~~~L~-~~gi~v~~~~--~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         301 IDALL-KAGFGFYHDR--WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             HHHHH-HTTCBCBCSS--SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             HHHHH-HcCCCccccC--CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            67776 7899886543  257899999987 8999999999999875

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=1.5e-23  Score=191.01  Aligned_cols=318  Identities=14%  Similarity=0.048  Sum_probs=225.3

Q ss_pred             CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      ...|++|+++|.+..    . ++ .+....++.+.+.+.+++.++.+++.+++++|+|.+++.++..+.++|++|++...
T Consensus         9 ~~v~~~V~~am~~~~----~-~h-r~~~f~~i~~~~~~~l~~ll~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv~~~   82 (348)
T d1iuga_           9 VRLHPKALEALARPQ----L-HH-RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVY   82 (348)
T ss_dssp             CCCCHHHHHHHHSCC----C-CT-TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCCHHHHHHhcCCC----C-CC-CCHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHhcccccccceeecc
Confidence            356789988876543    2 12 23335566777777788888888888999999999999999999999999999888


Q ss_pred             Cccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC--
Q 015768          122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG--  197 (400)
Q Consensus       122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~--  197 (400)
                      ++++  +...++..|.++..+ ..+ .+..++.+.+   ...  .++++++++..+.+|...|   +.+|.++|++|+  
T Consensus        83 G~f~~~~~~~a~~~~~~~~~~-~~~-~g~~~~~~~~---~~~--~~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~~~  152 (348)
T d1iuga_          83 GKFSERFYEIALEAGLVVERL-DYP-YGDTPRPEDV---AKE--GYAGLLLVHSETSTGALAD---LPALARAFKEKNPE  152 (348)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEE-ECC-TTCCCCTTTS---CCS--SCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred             hHHHHHHHHHHHhcCcccccc-ccc-CCCccccccc---ccc--CCCeeEEEecchhhhhhcc---HHHHHHHHHhhhcc
Confidence            8766  446678888877766 443 3323343332   223  3589999999999999999   888888988874  


Q ss_pred             CEEEEcccccccccCCCCccccCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHH--------------hhc
Q 015768          198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK--------------VQD  262 (400)
Q Consensus       198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~--------------~~~  262 (400)
                      .++++|.+.+.+   ..+......+.+++++|.+|++ |.+|  +|+++.+   ++..++++.              ...
T Consensus       153 ~l~~vDavss~g---~~~i~~d~~~iD~~~~~sqK~l~gppG--~~~v~~s---~~~le~~~~~~~~~dl~~~~~~~~~~  224 (348)
T d1iuga_         153 GLVGADMVTSLL---VGEVALEAMGVDAAASGSQKGLMCPPG--LGFVALS---PRALERLKPRGYYLDLARELKAQKEG  224 (348)
T ss_dssp             CEEEEECTTTBT---TBCCCSGGGTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHTCCCCSSTTCHHHHHHHHTTT
T ss_pred             ceeechhhhccc---ccccccccccCCEEEeccccceecCCc--eeeeeec---hHHHhhhcccccccchhhhhhhhccC
Confidence            789999998843   3445555567889999999999 5555  6888887   555444321              122


Q ss_pred             cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768          263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGAIYLWARLPEKHLDDFEVVRWLA  341 (400)
Q Consensus       263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (400)
                      ...++++....+++..+|+...+...+..+..+.....++..++..+. .... ..+...+.+.+|+.. +..++...| 
T Consensus       225 ~~~~Tp~v~~i~~l~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl-~~~~~~~s~~v~~~~~P~g~-~~~~~~~~l-  301 (348)
T d1iuga_         225 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGGL-RPVPKRFSPAVAAFYLPEGV-PYARVKEAF-  301 (348)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTTC-EESCSSBCTTCEEEECCTTC-CHHHHHHHH-
T ss_pred             cccccccchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhh-ccChhhcCCeEEEEECCCCC-CHHHHHHHH-
Confidence            456788888998888888753222334444444444555555555544 3322 122335667887654 788888877 


Q ss_pred             HhcCeEEeCCCccCCCCeEEEEe-ccCCHHHHHHHHHHHHHHHHHH
Q 015768          342 HRHGVVVIPGGACGCRGHLRISF-GGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +++||.+.+|........+||+. +..+.+|++.+++.|+++++++
T Consensus       302 ~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~~  347 (348)
T d1iuga_         302 AQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  347 (348)
T ss_dssp             HTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            58999999987665667899984 4589999999999999999986

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.92  E-value=9.3e-23  Score=185.51  Aligned_cols=284  Identities=20%  Similarity=0.227  Sum_probs=208.7

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~  145 (400)
                      ....++.+++.++...|  .+..+++++|+.|+..++.+++++||+|+++...|.+....    +...|+++.++ +.  
T Consensus        61 ~nPT~~~LE~~la~LEg--g~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~v-d~--  135 (397)
T d1y4ia1          61 GNPTTDALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFV-DA--  135 (397)
T ss_dssp             SCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEE-CT--
T ss_pred             CCHHHHHHHHHHHHHhC--CccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEeecc-CC--
Confidence            34567777777777766  36678899999999999999999999999999999887654    46789999888 32  


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                          -|.+.+++.+++++  |+|+++.|.||+..+.|   +++|+++|+++|+++++|.++.....    ..+...+.++
T Consensus       136 ----~d~~~~~~~i~~~T--klv~~Esp~NP~l~v~D---i~~i~~iA~~~gi~~vvDnT~atP~~----~~Pl~~GaDi  202 (397)
T d1y4ia1         136 ----GKPEEIRAAMRPET--KVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYC----QQPLQLGADI  202 (397)
T ss_dssp             ----TSHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCGGGGTCSE
T ss_pred             ----CCHHHHHHhcCCCC--cEEEecCCcccceeecc---cHHHHHHhhcCCceEEecCcccCccc----CcchhcCCCE
Confidence                26889999998877  99999999999999999   99999999999999999999873222    2334557789


Q ss_pred             EEeccccccCC-CcceeEEEEccCCcHHHHHHH--HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQL--LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       226 ~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      ++.|++|.++. ...-.|.++++   .+.+.+.  ...+......+++...+.+...|+.    +.-+++++.+++..+.
T Consensus       203 vihS~TKyi~Ghsdvl~G~v~~~---~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T----L~lRm~~~~~nA~~lA  275 (397)
T d1y4ia1         203 VVHSVTKYINGHGDVIGGIIVGK---QEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT----LGIRMERHCENALKIA  275 (397)
T ss_dssp             EEEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred             EEEehhhhcCCCcceeeeccCCC---HHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc----HHHHHHHHHHHHHHHH
Confidence            99999999953 34556778877   5655543  3344444667888999988889887    6788899999999999


Q ss_pred             HHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEE---eCCCcc--------
Q 015768          303 EALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC--------  354 (400)
Q Consensus       303 ~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v---~~g~~~--------  354 (400)
                      +.|++++.+. |..|.                .+-.+.+.+..    ..+.+.++++.-.++-   .-|...        
T Consensus       276 ~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~----~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~~  351 (397)
T d1y4ia1         276 RFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG----GLEAGRRMINSVELCLLAVSLGDTETLIQHPAS  351 (397)
T ss_dssp             HHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETT----HHHHHHHHHHTCSSSEECSCCSCSSCEEECTTT
T ss_pred             HHHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEEEEecC----CHHHHHHHHHcCCccceeeccCcccceeeCccc
Confidence            9999987632 22220                23344455543    2233333443333322   222211        


Q ss_pred             --------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          355 --------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       355 --------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                    + .++.+|+|++.   |+.+++++.|.++|++
T Consensus       352 ~th~~~~~e~r~~~Gi~~~liRlsvGl---Ed~~DLi~Dl~~AL~~  394 (397)
T d1y4ia1         352 MTHSPVAPEERLKAGITDGLIRLSVGL---EDPEDIINDLEHAIRK  394 (397)
T ss_dssp             TTTSSSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred             cccccCCHHHHHHcCCCcCEEEEEecc---CCHHHHHHHHHHHHHH
Confidence                          0 24689999997   6666778888888875

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=2e-22  Score=183.01  Aligned_cols=284  Identities=20%  Similarity=0.168  Sum_probs=208.9

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~  145 (400)
                      .....+.+++.++...|  .+..+++++|+.|+. ++.+++++||+|++..+.|.+....++    ..|+++.++ ..  
T Consensus        47 ~nPt~~~le~~la~LE~--~~~a~~fsSGMaAis-all~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~-d~--  120 (380)
T d1ibja_          47 GNPTRDALESLLAKLDK--ADRAFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRV-NT--  120 (380)
T ss_dssp             CCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHH-HHHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEE-CT--
T ss_pred             CChHHHHHHHHHHHHcC--CceEEehhhHHHHHH-HHHHhhCCCCEEEEEecccccccchhhhhhcccccccccc-Cc--
Confidence            45566777777777766  467788999999996 566888999999999999988876664    468888777 32  


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                          .+.+.+++.+++++  |+|+++.|+||+..+.|   +++|+++|+++|+++|+|+++.....    ..+...+.++
T Consensus       121 ----~~~~~~~~ai~~~t--~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vVDnT~atP~~----~~Pl~~GaDi  187 (380)
T d1ibja_         121 ----TKLDEVAAAIGPQT--KLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVL----SRPLELGADI  187 (380)
T ss_dssp             ----TSHHHHHHHCCSSE--EEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGGGTTCSE
T ss_pred             ----chHHHHHHHhccCc--cEEEecccccccccccc---HHHHHHHHHHcCCeEEeecccccccc----ccccccCCCE
Confidence                27889999998776  99999999999999999   99999999999999999999874322    2345567889


Q ss_pred             EEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       226 ~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ++.|++|.++. ...-.|.++.++  +++.+.+..........+++...+.+...++.    +.-+++++.+++..+.+.
T Consensus       188 VvhS~TKyi~GhsDv~~G~v~~~~--~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T----l~lRm~~~~~nA~~lA~~  261 (380)
T d1ibja_         188 VMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT----MALRIEKQQENARKIAMY  261 (380)
T ss_dssp             EEEETTTTTTCSSCCCCEEEEECS--HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHH
T ss_pred             EEecccceeccccCccccccccch--hhHHHHHHhhccccCCcCCHHHHHHHHhcchh----hhhhHHHHHHHHHHHHHH
Confidence            99999999953 334567776664  67778887777766777899999999999987    688889999999999999


Q ss_pred             hccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc----------
Q 015768          305 LSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC----------  354 (400)
Q Consensus       305 L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~----------  354 (400)
                      |++++.+. +..|                .++..+.+.+..    . +.+.++++.-.++   +.-|...          
T Consensus       262 L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~----~-~~a~~f~d~l~l~~~a~SlG~~~SLi~~p~~~t  336 (380)
T d1ibja_         262 LSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS----V-ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMS  336 (380)
T ss_dssp             HHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC----H-HHHHHHHHHCSSSEECSCCCSSSCEEECTTTTT
T ss_pred             HHhCCCeeEEeccccccCccccccccccccccccccccccH----H-HHHHHHHHhCCcCeEeeccCCccccccCchhhh
Confidence            99887643 2221                122333344432    2 2223333333321   1122111          


Q ss_pred             ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                  + .++.+|||++.   |+.+++++.|++||+.+
T Consensus       337 h~~~~~e~r~~~Gi~~~lvRlSvGl---E~~eDLi~Dl~qAl~~l  378 (380)
T d1ibja_         337 HASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKTF  378 (380)
T ss_dssp             TCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHSC
T ss_pred             hhcCCHHHHHHcCCCcCeEEEEecc---CCHHHHHHHHHHHHHhc
Confidence                        0 14679999997   66777889999998764

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=6.8e-23  Score=186.12  Aligned_cols=288  Identities=23%  Similarity=0.205  Sum_probs=212.8

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCC
Q 015768           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSS  145 (400)
Q Consensus        70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~  145 (400)
                      -....+.+++.++++.|  .+..+++++|+.|+..++.+++++||+|++....|.+....+    ...|..+.++ ..  
T Consensus        48 ~nPt~~~le~~la~LEg--g~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~-d~--  122 (384)
T d1cs1a_          48 GNPTRDVVQRALAELEG--GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-DQ--  122 (384)
T ss_dssp             CCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEE-CT--
T ss_pred             CCHHHHHHHHHHHHHhC--CCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccccc-cC--
Confidence            34566777777777766  467899999999999999999999999999999997776444    4457777766 21  


Q ss_pred             CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                          .|.+.+++.+.+++  ++|+++.|.||+..+.|   +++|+++|+++|+++|+|+++.....    ..+...+.++
T Consensus       123 ----~d~~~~~~~~~~~t--~~v~~EspsNP~l~v~D---i~~i~~ia~~~g~~~vVDNT~atP~~----~~Pl~~GaDi  189 (384)
T d1cs1a_         123 ----GDEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPAL----QNPLALGADL  189 (384)
T ss_dssp             ----TCHHHHHHHHHTCC--SEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCGGGGTCSE
T ss_pred             ----CCHHHHHhhccccc--cEEEEeccccccceecc---HHHHhhhhhhcCcEEEEeccccCccc----ccccccCCCE
Confidence                26788999998887  99999999999999999   99999999999999999999863322    2334567889


Q ss_pred             EEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       226 ~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ++.|.+|.++. ...-.|.++.++  +.+.+.+...+......+++...+.+...|+.    +.-+++++.+++..+.+.
T Consensus       190 VvhS~TKyi~Ghsdv~~G~vv~~~--~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T----L~lRm~~~~~nA~~lA~~  263 (384)
T d1cs1a_         190 VLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAIVKY  263 (384)
T ss_dssp             EEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHH
T ss_pred             EEEccccccccCCCcccccccCCc--hhhhhhhhhhhhhhhhccccccHHHHhhccch----hHHHHHHHHHHHHHHHHh
Confidence            99999999953 345567777765  67777777766666677888888888888887    678889999999999999


Q ss_pred             hccCCCC-cccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEE---eCCCccC---------
Q 015768          305 LSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGACG---------  355 (400)
Q Consensus       305 L~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v---~~g~~~~---------  355 (400)
                      |++++.+ ++..|.                .+..+.+.+..   +.++ +.++++.-.++.   .-|....         
T Consensus       264 L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~---~~~~-a~~f~~~L~l~~~a~SlGg~eSLi~~p~~~t  339 (384)
T d1cs1a_         264 LQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQT-LRRFLGGLSLFTLAESLGGVESLISHAATMT  339 (384)
T ss_dssp             HTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHH-HHHHHHTCSSSEEBSCCCSSSCEEEEGGGTT
T ss_pred             cccCCceeeeeeccccchhHHHHHHhhcCCCcceeEEeecc---hHHH-HHHHHHhCCcceeccccCCccceeccccccc
Confidence            9988763 222221                23344455543   2222 233443333322   2222210         


Q ss_pred             --------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          356 --------------CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       356 --------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                                    .++.+|+|++.   |+.+++++.|++||+...+
T Consensus       340 h~~~~~e~r~~~Gi~~~lvRlSvGl---Ed~eDLi~Dl~~AL~aa~~  383 (384)
T d1cs1a_         340 HAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAANK  383 (384)
T ss_dssp             TTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHTC
T ss_pred             cccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHHHhcC
Confidence                          14679999997   7777888899999887654

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=5.9e-23  Score=184.22  Aligned_cols=359  Identities=16%  Similarity=0.123  Sum_probs=257.1

Q ss_pred             hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhh
Q 015768           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      +++.+...+.-+.+..+.+++.|+|-.+++..  +|.|++++...+.+....+      |+...-.++++....++..+.
T Consensus         4 l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~--S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~l   81 (405)
T d1kl1a_           4 LPQQDPQVFAAIEQERKRQHAKIELIASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL   81 (405)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHcCceEeccCCcC--CHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHH
Confidence            44556666777777777778999998888775  4999999988886532222      333334456666666777888


Q ss_pred             cCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH-----HhcCcEEEEeccCCCCCCCCCHHHHHHhh
Q 015768           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (400)
Q Consensus        85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l  159 (400)
                      ++.+.-+|... +++.|+..++.+|++|||+|+..++.+.++...-     .....+.+.+ +.+++++.+|.|.+++..
T Consensus        82 F~a~~anVqp~-SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~~ID~d~l~~~a  159 (405)
T d1kl1a_          82 FGAEHANVQPH-SGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAY-GVDPETHVIDYDDVREKA  159 (405)
T ss_dssp             HCCSEEECCCS-SHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEE-CBCTTTCSBCHHHHHHHH
T ss_pred             hCCCcceeecc-CchHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEe-ccchhcccccHHHHHHHH
Confidence            88765455444 4669999999999999999999988876655321     2234678888 899888899999999998


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccCCCc
Q 015768          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      ...+ ||+|++....+|  ..+|   ++++.++|++.|.+++.|.+|..+.. ++....+. ...+++++|.+|.+  +|
T Consensus       160 ~~~k-PklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~-~~aDvvt~tThKtl--rG  230 (405)
T d1kl1a_         160 RLHR-PKLIVAAASAYP--RIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PYAHFVTTTTHKTL--RG  230 (405)
T ss_dssp             HHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSSTT--CC
T ss_pred             HhhC-cceEEecccccc--cccC---hHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChh-hhhhheeccccccc--cC
Confidence            8544 699987654443  5677   78888888899999999999975554 33322333 34678899999998  58


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCcc-HHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICAS-IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  316 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  316 (400)
                      .|.|.|.++   +++.+++.........+.+ .....+.+.++.+ ..+.++.+.++..++++.|.+.|.+.|...+.+.
T Consensus       231 Prgg~I~~~---~~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~gg  307 (405)
T d1kl1a_         231 PRGGMILCQ---EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGG  307 (405)
T ss_dssp             CSCEEEEEC---HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred             CCCceEEec---chhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCceeecCC
Confidence            889999998   7888888876544343332 2333333334443 2356789999999999999999999887444454


Q ss_pred             CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCc--cCCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHH
Q 015768          317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGA--CGCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~--~~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~  385 (400)
                      .....+++++.....++.+... ++++.||.+.    |+..  ...+.+|||+...     +.++|+.+..+.+.+++..
T Consensus       308 Td~H~vlvdl~~~~~~g~~ae~-~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~  386 (405)
T d1kl1a_         308 TDNHLLLVDLRPQQLTGKTAEK-VLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN  386 (405)
T ss_dssp             CSSSEEEEECGGGTCCHHHHHH-HHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred             CccceeeccccccCCcHHHHHH-HHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            5578888888765556665544 5568999986    3321  1135789998652     5778988888888888864


Q ss_pred             H
Q 015768          386 L  386 (400)
Q Consensus       386 ~  386 (400)
                      .
T Consensus       387 ~  387 (405)
T d1kl1a_         387 V  387 (405)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=1.8e-22  Score=183.57  Aligned_cols=283  Identities=17%  Similarity=0.187  Sum_probs=209.2

Q ss_pred             HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCC
Q 015768           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSK  146 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~  146 (400)
                      ...++.+++.++++.|  .+..+++++|+.|+..++.+++++||+|++....|.+....+    +..|+++.++ +.   
T Consensus        58 nPT~~~LE~~la~LEg--~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~-d~---  131 (392)
T d1gc0a_          58 NPTLNLLEARMASLEG--GEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV-DM---  131 (392)
T ss_dssp             CHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE-CT---
T ss_pred             ChHHHHHHHHHHHHhC--CcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccC-Cc---
Confidence            4566777777777666  467888999999999999999999999999999999987665    4568988887 32   


Q ss_pred             CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN  226 (400)
Q Consensus       147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~  226 (400)
                         .|.+.+++++++++  ++|+++.|.||+..+.|   +++|+++|+++|+++++|.++......    .+...+.+++
T Consensus       132 ---~d~~~~~~ai~~~t--~lv~~Esp~NP~l~v~D---i~~i~~ia~~~g~~~vvDnT~atP~~~----~Pl~~GaDiv  199 (392)
T d1gc0a_         132 ---ADLQALEAAMTPAT--RVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ----RPLELGADLV  199 (392)
T ss_dssp             ---TCHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC----CGGGGTCSEE
T ss_pred             ---cCHHHHHHhCCCCC--eEEEecccccceeeecc---hHHHHHHHHhcCCEEEEecCccCcccc----ChHHhCCCEE
Confidence               27899999999887  99999999999999999   999999999999999999998854432    2345577899


Q ss_pred             EeccccccCC-CcceeEEEEccCCcHHHHHHH--HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768          227 LFSFSKAYGM-MGWRVGYIAYPSEVEGFATQL--LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  303 (400)
Q Consensus       227 ~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  303 (400)
                      +.|.+|.++. ...-.|.++++   ++.+.++  ...+......+++...+.+...++.    +.-+++++.+++..+.+
T Consensus       200 ihS~TKyi~Ghsd~~~G~v~~~---~~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T----L~lRm~~~~~nA~~lA~  272 (392)
T d1gc0a_         200 VHSATKYLSGHGDITAGIVVGS---QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT----LNLRMDRHCANAQVLAE  272 (392)
T ss_dssp             EEETTTTTTCSSSCCCEEEEEC---HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHH
T ss_pred             EEecceeecCCcccccccccch---hHHHHHHHHHHHHHccCCcCChhhHHHHHhcccc----HHHHHHHHHHHHHHHHH
Confidence            9999999953 44667888887   5665544  3444445667888999988888887    67888999999999999


Q ss_pred             HhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCcc---------
Q 015768          304 ALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC---------  354 (400)
Q Consensus       304 ~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~---------  354 (400)
                      .|++++.++ +..|                .++-.+.+.+..    ..+.+..+++.-.+   ...-|...         
T Consensus       273 ~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~~----~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~pa~~  348 (392)
T d1gc0a_         273 FLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG----GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASM  348 (392)
T ss_dssp             HHHTCTTEEEEEEC----------------CCTTEEEEEETT----HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGT
T ss_pred             HHHhCCCccEEeeccccCCcccccccccccCCCcEEEEEEeC----CHHHHHHHHHhCCcceEeeccCCcChhhcCcccc
Confidence            999887632 2222                112234445542    22333333333333   22223221         


Q ss_pred             -------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          355 -------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       355 -------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                   + .++.+|||++.   |+.+++++.|.+||+.
T Consensus       349 th~~~~~e~r~~~Gi~~~liRlSVGl---Ed~eDLi~Dl~~AL~a  390 (392)
T d1gc0a_         349 THSSYTPEERAHYGISEGLVRLSVGL---EDIDDLLADVQQALKA  390 (392)
T ss_dssp             TTSSSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHcCCCcCeEEEEeee---CCHHHHHHHHHHHHHh
Confidence                         0 24689999997   6666777888888765

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.5e-22  Score=182.56  Aligned_cols=360  Identities=14%  Similarity=0.065  Sum_probs=256.0

Q ss_pred             hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcC
Q 015768           13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENK   86 (400)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~   86 (400)
                      ..+...+.-+.+....+++-|+|..+++..  ++.|++++...+.+....+      |+...-.++++....++..+.+|
T Consensus         9 ~~D~ei~~~i~~e~~rq~~~i~LiaSEN~~--S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~   86 (416)
T d1dfoa_           9 DYDAELWQAMEQEKVRQEEHIELIASENYT--SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG   86 (416)
T ss_dssp             HHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             hcCHHHHHHHHHHHHHHHcCceEecCcccC--CHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhC
Confidence            344556666677777778889998888775  5999999988886533222      32233335666666677777888


Q ss_pred             CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-----hcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768           87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-----MTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus        87 ~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      ....+|.. .+++.|+..++.++++|||+|+..+..+.++...-.     ....+.+.+ +.++.+ .+|.|.+++....
T Consensus        87 a~~anVqp-~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~-~IDyd~l~~~a~~  163 (416)
T d1dfoa_          87 ADYANVQP-HSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPY-GIDATG-HIDYADLEKQAKE  163 (416)
T ss_dssp             CSEEECCC-SSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEE-CBCSSS-SBCHHHHHHHHHH
T ss_pred             CCcceeec-ccCccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEec-ccCCcc-CccHHHHHHHHHH
Confidence            76555544 556799999999999999999999999877664322     223477777 777665 5999999998875


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee
Q 015768          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV  241 (400)
Q Consensus       162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~  241 (400)
                      .. ||+|++....  ....+|   ++++.++|++.|.++++|.+|..+...+..+.......+++++|++|.+  +|.|.
T Consensus       164 ~k-PklIi~G~S~--y~r~~d---~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtl--rGPrg  235 (416)
T d1dfoa_         164 HK-PKMIIGGFSA--YSGVVD---WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTL--AGPRG  235 (416)
T ss_dssp             HC-CSEEEEECSS--CCSCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTT--CCCSC
T ss_pred             hc-cceEEecccc--cccccC---HHHHHHHHHhcCceEEcchhhhhcceeccccCCcccccceeeeehhhcc--cCCCc
Confidence            43 6999877433  346788   8888888889999999999997555433222222233579999999998  58889


Q ss_pred             EEEEccCCcHHHHHHHHHhhccCCcCcc-HHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768          242 GYIAYPSEVEGFATQLLKVQDNIPICAS-IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  319 (400)
Q Consensus       242 G~i~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  319 (400)
                      |.+.++++.+++.+++.........+.+ .....+.+.++.+ ....++.+.++..+|++.|.+.|.+.|...+.+....
T Consensus       236 giI~~~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdn  315 (416)
T d1dfoa_         236 GLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDN  315 (416)
T ss_dssp             EEEEESSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSS
T ss_pred             eEEEeccchHhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCC
Confidence            9999876557888888766544443333 2333333344443 3456789999999999999999999987444455557


Q ss_pred             eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc------CCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Q 015768          320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..+++++.+...++.+.... +++.||.+.--..+      ..+.+|||+...     +.++|+.+..+.+.+++...
T Consensus       316 Hlvlvdl~~~~~~G~~a~~~-Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~  392 (416)
T d1dfoa_         316 HLFLVDLVDKNLTGKEADAA-LGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSI  392 (416)
T ss_dssp             SEEEEECGGGTCCHHHHHHH-HHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEecccCCCHHHHHHH-HHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHHcC
Confidence            78888887655566666664 46899998532211      135789998652     57799999999999888754

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.91  E-value=7.8e-23  Score=190.16  Aligned_cols=324  Identities=14%  Similarity=0.118  Sum_probs=224.2

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEeCCC
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPY  122 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~-i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~  122 (400)
                      .+++|+++|....    ...+  .....++.+.+.+.+++.++++..+ |+++.|+|.+++.++..+..+|+++++...+
T Consensus        28 ~~~~V~~Am~~~~----~~hr--~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl~~~~g  101 (388)
T d2ch1a1          28 CSKRVLTAMTNTV----LSNF--HAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNG  101 (388)
T ss_dssp             CCHHHHHHTTSCC----CCTT--CHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CCHHHHHHhCcCC----CCCC--CHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhccccccccccccc
Confidence            5788888764322    2223  3344567777777777777887554 5566789999999999999999999988888


Q ss_pred             ccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015768          123 YFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL  200 (400)
Q Consensus       123 ~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l  200 (400)
                      +++..  ...+..+...+.+ +.++. ...+.+.++....... ++++++++.+|.+|...+   ++++.++|+++|+++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~~t~tG~~~~---~~~i~~~~~~~~~~~  175 (388)
T d2ch1a1         102 IWAERAVEMSERYGADVRTI-EGPPD-RPFSLETLARAIELHQ-PKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLL  175 (388)
T ss_dssp             HHHHHHHHHHHHTTCEEEEE-ECCTT-SCCCHHHHHHHHHHHC-CSEEEEESEETTTTEECC---CTTHHHHHHHTTCEE
T ss_pred             cccccchhhhhhhccccccc-ccccc-cccchhhhhhhhccCC-cceeeeeecccccccccc---hhhhcchhcccccee
Confidence            76654  4456677776666 44333 2456666666665322 499999999999999999   888889999999999


Q ss_pred             EEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------------------
Q 015768          201 VVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------------------  261 (400)
Q Consensus       201 i~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------------------  261 (400)
                      ++|.+++.   +..+......+.++++.|.+|+++ +...+|+++.+   +...+.+....                   
T Consensus       176 ~vD~~ss~---g~~pid~~~~~~d~~~~s~~K~~~-gp~G~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (388)
T d2ch1a1         176 IVDAVASL---CGVPFYMDKWEIDAVYTGAQKVLG-APPGITPISIS---PKALDVIRNRRTKSKVFYWDLLLLGNYWGC  248 (388)
T ss_dssp             EEECTTTB---TTBCCCTTTTTCCEEECCCC-CCC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCGGGCHHHHHHHTTC
T ss_pred             eeeeeecc---cccccchhccCceEEEEccccccC-CCCeEEEEecc---HHHHHhhhcccCccccccccchhhhhhhcc
Confidence            99999984   345555666788899999999995 33346777777   55555544311                   


Q ss_pred             ----ccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCccc-CC--CCceEEEeeCCCCCCCH
Q 015768          262 ----DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVK-GG--EGAIYLWARLPEKHLDD  333 (400)
Q Consensus       262 ----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~  333 (400)
                          ..+..+++.....++..+++... .......++..+........+...+..... .+  .+...+.+.+|+. .+.
T Consensus       249 ~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~~p~g-~~~  327 (388)
T d2ch1a1         249 YDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKG-VDW  327 (388)
T ss_dssp             SSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTT-CCH
T ss_pred             cccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccccCCHHHhCCeEEEEECCCC-CCH
Confidence                12334566666666666665311 112333444444444455555544332221 11  2344667888765 378


Q ss_pred             HHHHHHHHHhcCeEEeCCCccCCCCeEEEE-ecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768          334 FEVVRWLAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      .++...|.+++||.+.+|..+...+.+||+ ++. ++.||++.+++.|+++|++.-
T Consensus       328 ~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~  383 (388)
T d2ch1a1         328 WKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH  383 (388)
T ss_dssp             HHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHhhC
Confidence            899888887889999998876667899999 776 689999999999999999853

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.7e-23  Score=193.82  Aligned_cols=351  Identities=13%  Similarity=0.075  Sum_probs=229.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~  102 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+......  .....+....+++.+.+...- ..+.++++++|++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~  114 (425)
T d1sffa_          37 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF--QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAV  114 (425)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCT--TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred             CCCCEEEEcCcCHHhhcccCCcHHHHHHHHHHHhhcCCccc--ccccCcHHHHHHHHHHhhhhhcccceeeeeccccchh
Confidence            4678999998874  5555 789999999999987432211  112234556677777766532 246899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCC--CCCCCC-----CHHHHHHhh
Q 015768          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCS--SKTLHP-----DADWLEKTL  159 (400)
Q Consensus       103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~--~~~~~~-----~~e~l~~~l  159 (400)
                      +.+++...  ....+|+....+|++....... .|.             ..... +.+  ..+...     +.+.+....
T Consensus       115 e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  193 (425)
T d1sffa_         115 ENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRA-LYPCPLHGISEDDAIASIHRIFKND  193 (425)
T ss_dssp             HHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEE-CCCBGGGTBCHHHHHHHHHHHHHHT
T ss_pred             hhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCcccc-CCccccccccchhhHHHHHHHHHhc
Confidence            99999874  2346899999999987754432 221             11111 111  111000     011111111


Q ss_pred             ccCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768          160 ETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  238 (400)
Q Consensus       160 ~~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  238 (400)
                      .....+.+++++..+...|. .++++.++.|.++|++||+++|+||++.++...+........+....+.+++|.+| .|
T Consensus       194 ~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~~~gK~l~-gG  272 (425)
T d1sffa_         194 AAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIA-GG  272 (425)
T ss_dssp             CCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGG-TS
T ss_pred             ccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccceecccccC-CC
Confidence            22233577777765655665 57889999999999999999999999997654443332222222222445789997 78


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768          239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG  316 (400)
Q Consensus       239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  316 (400)
                      +++|.++++   +++.+.+.......+++.++++..++.+.|+..+  +..++..+.-.+..+.+.+.+++.+.+..+..
T Consensus       273 ~P~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg  349 (425)
T d1sffa_         273 FPLAGVTGR---AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRG  349 (425)
T ss_dssp             SCCEEEEEE---HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEE
T ss_pred             cceEEEEEc---HHHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhhCCceEEEEc
Confidence            999999999   7887777666677889999999999999998522  23333333444445555566666665443444


Q ss_pred             CCceEEEeeCCCC----CCC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768          317 EGAIYLWARLPEK----HLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       317 ~~~~~~~~~~~~~----~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      . |.+..+.+...    ..+   ...+..+++ ++||++.++..  ..+.+|++++. +|++++++++++|.+++.++.+
T Consensus       350 ~-Gl~~~i~f~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~g~--~~n~i~~~PpL~it~~eid~~l~~l~~al~eikk  425 (425)
T d1sffa_         350 L-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ  425 (425)
T ss_dssp             E-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHCC
T ss_pred             c-ccEEEEEEeccCccCCccHHHHHHHHHHHH-HCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            4 44444443211    111   245666665 78999876432  35789999876 8999999999999999998753

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.91  E-value=1.8e-22  Score=186.85  Aligned_cols=321  Identities=14%  Similarity=0.083  Sum_probs=223.2

Q ss_pred             CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-
Q 015768           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-  109 (400)
Q Consensus        31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-  109 (400)
                      ++|+|+.  +.  .+++-++++.+.++++.   |...+...++++.+++++    |  .+..++|++||.|+..++.++ 
T Consensus         1 ~~ip~~~--~~--~~~~~~~~~~~~~~~~~---~~~G~~v~~~E~~la~~~----g--~~~ai~~~sgt~Al~~al~al~   67 (376)
T d1mdoa_           1 DFLPFSR--PA--MGAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLT----G--NQYAVAVSSATAGMHIALMALG   67 (376)
T ss_dssp             CCBCSCC--CC--CCHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHH----C--CSEEEEESCHHHHHHHHHHHTT
T ss_pred             CCccCCC--CC--CCHHHHHHHHHHHhcCC---CcCCHHHHHHHHHHHHHH----C--cCeEEEeCCHHHHHHHHHHHhC
Confidence            3556654  22  34677788888887653   323344667777777776    5  357889999999999999999 


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i  189 (400)
                      .++||+|+++..+|.+...++...|..++.+ +++++.+.+|++.|++.+++++  ++|+++   +..|...+   +.+|
T Consensus        68 ~~~gdeVi~~~~~~~~~~~ai~~~g~~pv~~-d~~~~~~~~d~~~l~~~i~~~t--kaIi~~---h~~G~~~~---~~~i  138 (376)
T d1mdoa_          68 IGEGDEVITPSMTWVSTLNMIVLLGANPVMV-DVDRDTLMVTPEHIEAAITPQT--KAIIPV---HYAGAPAD---LDAI  138 (376)
T ss_dssp             CCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEECCB---CGGGCCCC---HHHH
T ss_pred             CCCCCEEEEecccccccccchhccccceeee-cccccccCCCHHHHHHhcCCCC--eEEEEe---CCCCCccc---hhHH
Confidence            7899999999999999999999999999999 8998888999999999999876  888865   46898888   8889


Q ss_pred             HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc------
Q 015768          190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------  263 (400)
Q Consensus       190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~------  263 (400)
                      .++|+++|+++|+|++++.+..-...... ..+..++.++.+|.++.  ...|.+++++  +++.++++..+..      
T Consensus       139 ~~i~~~~~i~vIeD~a~a~g~~~~~~~~g-~~g~~~~Sf~~~K~l~~--g~GG~i~t~~--~~l~~~~~~~~~~g~~~~~  213 (376)
T d1mdoa_         139 YALGERYGIPVIEDAAHATGTSYKGRHIG-ARGTAIFSFHAIKNITC--AEGGIVVTDN--PQFADKLRSLKFHGLGVDA  213 (376)
T ss_dssp             HHHHHHHTCCBCEECTTCTTCEETTEETT-SSSEEEEECCTTSSSCS--SSCEEEEESC--HHHHHHHHHHTBTTEECC-
T ss_pred             HHHHHhcCceEEeccchhccCeeCCeecc-cccCccccCCCcCCCCC--CCCCEEEEec--hhHHHHHHhhcccCCcccc
Confidence            99999999999999999865532211111 22334444455798852  3358888877  7888888765431      


Q ss_pred             ------------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC----c-e
Q 015768          264 ------------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----A-I  320 (400)
Q Consensus       264 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~-~  320 (400)
                                        ..+.++..........|..    +++..++.+++++.+.+.|++++.........    . .
T Consensus       214 ~~~~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~~----~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~  289 (376)
T d1mdoa_         214 WDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK----LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWH  289 (376)
T ss_dssp             ----------CCEESSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCS
T ss_pred             cccccccccccccchhcccccccchhhhhhhhhhhhh----hhHHHHHHhhhhhhhhhhccccccccccccccccccccc
Confidence                              1223444444444444443    46666777778888888888876633322211    1 1


Q ss_pred             EEEeeCCC--CCCCHHHHHHHHHHhcCeEEeCCCcc-----------C----------CCCeEEEEecc-CCHHHHHHHH
Q 015768          321 YLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGAC-----------G----------CRGHLRISFGG-LVEDDCKAAA  376 (400)
Q Consensus       321 ~~~~~~~~--~~~~~~~~~~~l~~~~gi~v~~g~~~-----------~----------~~~~iRi~~~~-~~~~~~~~~~  376 (400)
                      ...+.++.  ...+.+++.++| +++||.+......           .          ....+.+-++. ++.+|++..+
T Consensus       290 ~~~~~~~~~~~~~~Rd~l~~~L-~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~  368 (376)
T d1mdoa_         290 LFIIRVDEARCGITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVI  368 (376)
T ss_dssp             CEEEECCHHHHSSCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHH
T ss_pred             ccccccccccchhhHHHHHHHH-HHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHH
Confidence            12222221  112456788877 5899988643211           0          02457776655 7999999999


Q ss_pred             HHHHHHH
Q 015768          377 DRLRRGL  383 (400)
Q Consensus       377 ~~l~~~l  383 (400)
                      +.|++++
T Consensus       369 ~~i~~i~  375 (376)
T d1mdoa_         369 TALHQIA  375 (376)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998865

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7e-23  Score=190.11  Aligned_cols=333  Identities=13%  Similarity=0.117  Sum_probs=228.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+++.........   ......+++.+.+..+  .+.+++++++++|++
T Consensus        38 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~v~~~~sGseA~e  112 (404)
T d2byla1          38 VEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAFY---NNVLGEYEEYITKLFN--YHKVLPMNTGVEAGE  112 (404)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTEE---ESSHHHHHHHHHHHHT--CSEEEEESSHHHHHH
T ss_pred             CCCCEEEEecCCHHHHhhcCCCHHHHHHHHHHHhhCCCcccccc---cchHHHHHHhhhhccc--ccccccccCccccch
Confidence            5678999998875  4454 789999999999987442221111   1222334444444433  578999999999999


Q ss_pred             HHHHHhcC----------CCCEEEEeCCCccchhHHHHhcC--------c-----EEEEeccCCCCCCCCCHHHHHHhhc
Q 015768          104 NIVLTLCD----------AGDSVVMFAPYYFNSYMSFQMTG--------V-----THILVGPCSSKTLHPDADWLEKTLE  160 (400)
Q Consensus       104 ~~~~~l~~----------~gd~vlv~~p~~~~~~~~~~~~g--------~-----~~~~~~~~~~~~~~~~~e~l~~~l~  160 (400)
                      .+++....          ....++....+|++.........        .     .+..+ |.      .|++.+++.+.
T Consensus       113 ~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~-p~------~d~~~l~~~l~  185 (404)
T d2byla1         113 TACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII-PY------NDLPALERALQ  185 (404)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEE-CT------TCHHHHHHHHT
T ss_pred             hHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEe-cc------cCHHHHHHhcC
Confidence            99988631          23577778888876443322211        1     12223 22      27889999987


Q ss_pred             cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC--cEEEEeccccccCCC
Q 015768          161 TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD--HVVNLFSFSKAYGMM  237 (400)
Q Consensus       161 ~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~i~~~s~sK~~g~~  237 (400)
                      ... +.+|+++..+...|. .++++.+++|.++|++||+++|+||++.+|...+........+  .|++  +++|.++ .
T Consensus       186 ~~~-iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~--~~gK~l~-g  261 (404)
T d2byla1         186 DPN-VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALS-G  261 (404)
T ss_dssp             STT-EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-T
T ss_pred             CCC-eEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEE--EECchhh-C
Confidence            543 677877755666674 5788899999999999999999999998875555433222221  2343  6789998 5


Q ss_pred             c-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc--c
Q 015768          238 G-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--K  314 (400)
Q Consensus       238 g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~  314 (400)
                      | +++|.++.+   +++.+.+.......+++.++++..++.+.|+..++  .+..++..+...++.+.|+++....+  +
T Consensus       262 G~~p~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~i~~v  336 (404)
T d2byla1         262 GLYPVSAVLCD---DDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTAV  336 (404)
T ss_dssp             TSSCCEEEEEC---HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHTSCTTTEEEE
T ss_pred             CCccceeeeec---hhhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHHh--cCchhhhhHhhHHHHHHHHhhccccceee
Confidence            5 799999999   78877777767777889999999999999985221  34455666667778887777543112  2


Q ss_pred             CCCCceEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          315 GGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       315 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ... |++..+.+.. ......++..+++ ++||++.+.    ..+.+|+++.. +|++++++++++|.+++.++
T Consensus       337 Rg~-Gl~~~i~~~~~~~~~~~~~~~~l~-~~Gvl~~~~----~~~~i~l~PpL~it~~~id~~~~~l~~al~~f  404 (404)
T d2byla1         337 RGK-GLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPT----HGDIIRFAPPLVIKEDELRESIEIINKTILSF  404 (404)
T ss_dssp             EEE-TTEEEEEECCCSSCCHHHHHHHHH-HTTEECEEE----ETTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             eec-ccEEEEEEecCCchhHHHHHHHHH-hCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHcC
Confidence            233 4444444432 2235667888776 899998763    25789999876 79999999999999999864

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.91  E-value=1.3e-22  Score=187.82  Aligned_cols=321  Identities=16%  Similarity=0.140  Sum_probs=220.8

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p  121 (400)
                      +.|++|+++|....    ...+  .....++.+.+.+.+++.+|++. ..|++++|+|.+++.++..+..+|+++++...
T Consensus        28 ~v~~~Vl~am~~~~----~~hr--~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~~~~~  101 (377)
T d1vjoa_          28 NAHPSVLQAMNVSP----VGHL--DPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVA  101 (377)
T ss_dssp             CCCHHHHHHHSSCC----CCTT--SHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             CCCHHHHHHhCcCC----CCCC--CHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhccccccccceeee
Confidence            45788888764322    2222  33456677777777888889864 56777788999999999999999999999888


Q ss_pred             Cccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768          122 YYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS  198 (400)
Q Consensus       122 ~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~  198 (400)
                      .|++..  ......+.....+ ...... ..+.+..+.... ..+  +++.+++.+|.||.+.|   ++++.++|+++|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~--~~v~~~~~~~~tg~~~~---i~~i~~~~~~~g~  174 (377)
T d1vjoa_         102 GYFGNRLVDMAGRYGADVRTI-SKPWGE-VFSLEELRTALETHRP--AILALVHAETSTGARQP---LEGVGELCREFGT  174 (377)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred             chhhhhhhhhhhhhccccccc-ccCCCC-cccchhhhhhhhcCcc--eeeeeeeeeccceeeec---hhhhhhhhhhccc
Confidence            876543  3344556555555 333333 335555554443 444  88999999999999999   9999999999999


Q ss_pred             EEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc----------------
Q 015768          199 WLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD----------------  262 (400)
Q Consensus       199 ~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~----------------  262 (400)
                      ++++|.+++.   +..+......+.++++.|.+|+++ ++..+|++..+   +...+.......                
T Consensus       175 ~~~vDa~~~~---g~~~~~~~~~~~d~~~~s~~K~~~-gp~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (377)
T d1vjoa_         175 LLLVDTVTSL---GGVPIFLDAWGVDLAYSCSQKGLG-CSPGASPFTMS---SRAIEKLQRRRTKVANWYLDMNLLGKYW  247 (377)
T ss_dssp             EEEEECTTTT---TTSCCCTTTTTCSEEECCSSSTTC-SCSSCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHHHH
T ss_pred             eEEEecchhh---hhhhhcccccccceeeeccccccc-CCCEEEEecch---hhHHhhhhccCCCCcceeeccchhhhcc
Confidence            9999999983   334455556678899999999985 33346777666   555554432111                


Q ss_pred             ----cCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC--CCceEEEeeCCCCCCCHHH
Q 015768          263 ----NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       263 ----~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  335 (400)
                          ....+++.....++..+... .....+...++.+++...+.+.+...+...+..+  .+...+.+.+++. .+..+
T Consensus       248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~-~~~~~  326 (377)
T d1vjoa_         248 GSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDG-VDGKA  326 (377)
T ss_dssp             STTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTT-CCHHH
T ss_pred             CcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCC-CCHHH
Confidence                12223344443443333332 1122466667777788888888887665332222  2234556677654 37899


Q ss_pred             HHHHHHHhcCeEEeCCCccCCCCeEEEE-ecc-CCHHHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       336 ~~~~l~~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~l~  384 (400)
                      +..+|.+++||.+..|..+..++.+||+ ++. +++||+++++++|+++++
T Consensus       327 l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         327 VARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             HHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            9998988889999998877677899999 576 689999999999998874

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.91  E-value=1.9e-23  Score=195.37  Aligned_cols=340  Identities=10%  Similarity=0.032  Sum_probs=219.5

Q ss_pred             HHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC-CC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH
Q 015768           23 QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK-YG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN   99 (400)
Q Consensus        23 ~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t   99 (400)
                      ++.|--.++.+.|+.+... +.|..|++++.+++.+..... ..  ......++.+.+.+.+++..|++++++++|+++|
T Consensus        19 R~~F~~~~~~iYLd~as~g-~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~llga~~~ei~~~~~~T   97 (404)
T d1qz9a_          19 RQQFALPEGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTS   97 (404)
T ss_dssp             GGGBCCCTTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHH
T ss_pred             HhcCCCCCCCEEcCCcccc-cCCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHhCCCCCcEEEecCch
Confidence            3444445678888886533 357888999988876532111 10  0112234556666667777799999999999999


Q ss_pred             HHHHHHHHHh------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768          100 QAFVNIVLTL------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (400)
Q Consensus       100 ~a~~~~~~~l------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p  173 (400)
                      ++++.++...      ..+++.|++.+..|++........+.++..+ +.+..+ ..+.+.+++++++++  ++|.+++.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~i~~~T--~lV~i~~v  173 (404)
T d1qz9a_          98 INLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQ-GYTLRL-VDSPEELPQAIDQDT--AVVMLTHV  173 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCS-SCEEEE-ESSGGGHHHHCSTTE--EEEEEESB
T ss_pred             HHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeee-ceeccc-cccchhHHHhcCCCc--eEEEEecc
Confidence            9998876543      3678889888888877655544444433333 333233 347788999998887  99999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  253 (400)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~  253 (400)
                      +|.||.++|   +++|+++|+++|+++++|.++....   .+......+.++++.|.+|+++.++..+|++..+.   ..
T Consensus       174 ~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~g~---~~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~---~~  244 (404)
T d1qz9a_         174 NYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA---VPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSP---QL  244 (404)
T ss_dssp             CTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT---SCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECT---TT
T ss_pred             cccccceec---HHHHhccccccccceeEEeeccccc---cccccccccceEEEEechhhcccCCceEEEEEech---hh
Confidence            999999999   9999999999999999999999443   33333345667889999999853444467777663   33


Q ss_pred             HHHHHHhh-----------------------ccCCcCccHHHHHHHHHHh---cC-CcHHHHHHHHHHHHHHHHHHHHhc
Q 015768          254 ATQLLKVQ-----------------------DNIPICASIISQHLALYSL---QT-GPEWVTERVKDLVRNREIIREALS  306 (400)
Q Consensus       254 ~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l---~~-~~~~~~~~~~~~~~~~~~l~~~L~  306 (400)
                      .+.+....                       .....+.+..........+   .. +.+...+....+......+.+.+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  324 (404)
T d1qz9a_         245 CDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRC  324 (404)
T ss_dssp             TTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHhhc
Confidence            22221100                       0111233334433333333   22 223333333344444444444554


Q ss_pred             cCCCCcccCCCC----ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec-c-CCHHHHHHHHHHHH
Q 015768          307 PLGEGAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-G-LVEDDCKAAADRLR  380 (400)
Q Consensus       307 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~-~-~~~~~~~~~~~~l~  380 (400)
                      ..+++++.+|..    +.++.+.++    ++.++...|. ++||.+..    ..++.||||++ . +|++|++++++.|+
T Consensus       325 ~~~~~~i~~p~~~~~r~~~vsf~~~----~~~~v~~~L~-~~gi~~~~----r~~~~lRiS~~h~ynt~~did~~~~~L~  395 (404)
T d1qz9a_         325 AAHELTLVTPREHAKRGSHVSFEHP----EGYAVIQALI-DRGVIGDY----REPRIMRFGFTPLYTTFTEVWDAVQILG  395 (404)
T ss_dssp             TTSCCEECSCSSGGGBCSEEEEECT----THHHHHHHHH-TTTEECEE----ETTTEEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCEEEECCCCccceeeEEEEecC----CHHHHHHHHH-HCCCEEee----cCCCeEEEECCCCCCCHHHHHHHHHHHH
Confidence            555556554421    234556665    4778888774 88997531    13678999995 3 89999999999999


Q ss_pred             HHHHH
Q 015768          381 RGLEE  385 (400)
Q Consensus       381 ~~l~~  385 (400)
                      +++++
T Consensus       396 ~vl~~  400 (404)
T d1qz9a_         396 EILDR  400 (404)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99875

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.91  E-value=3.4e-22  Score=182.13  Aligned_cols=283  Identities=18%  Similarity=0.167  Sum_probs=205.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCC
Q 015768           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSK  146 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~  146 (400)
                      ....+.+++.++++.|  .+..+++++|+.|+..++.+++++||+|++....|.+....+    +..|+++.++ +.   
T Consensus        66 nPt~~~LE~~la~LEg--g~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~-~~---  139 (398)
T d1qgna_          66 NPTTVVLEEKISALEG--AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVI-DP---  139 (398)
T ss_dssp             CHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CS---
T ss_pred             ChHHHHHHHHHHHHhC--CceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhcccccccccccccc-cc---
Confidence            4566667777766666  467899999999999999999999999999999998877654    5568888877 31   


Q ss_pred             CCCCCHHHHH-HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768          147 TLHPDADWLE-KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV  225 (400)
Q Consensus       147 ~~~~~~e~l~-~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i  225 (400)
                         .+.+..+ ..+.+++  ++|+++.|.||+..+.|   +++|+++|+++|+++++|+++.....    ..+...+.++
T Consensus       140 ---~~~~~~~~~~~~~~t--~~v~~EspsNP~l~v~D---i~~ia~ia~~~g~~~vVDnT~atP~~----~~Pl~~GaDi  207 (398)
T d1qgna_         140 ---ADVGALELALNQKKV--NLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN----QKALALGADL  207 (398)
T ss_dssp             ---SCHHHHHHHHHHSCE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCTTTTTCSE
T ss_pred             ---cchhhhhhhhccccc--eEEEccCccccccccch---HHHHHHHHhhcCCEEEecceeecccc----CCchhhCCCE
Confidence               1333344 3445565  99999999999999999   99999999999999999999873222    2345567889


Q ss_pred             EEeccccccCCC-cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768          226 NLFSFSKAYGMM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  304 (400)
Q Consensus       226 ~~~s~sK~~g~~-g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (400)
                      ++.|++|.+|.. .+-.|.+..+   +++.+.+...........++...+.+...|+.    +.-+++++.+++..+.+.
T Consensus       208 VihS~TKy~~Ghsdv~~G~v~~~---~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T----L~lRm~~~~~nA~~lA~~  280 (398)
T d1qgna_         208 VLHSATKFLGGHNDVLAGCISGP---LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEI  280 (398)
T ss_dssp             EEECTTTTTTCSSSCCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHH
T ss_pred             EEEechhhcCcccceeehhhcch---hhhhhhhhhhcccCCCcCCHHHHHHHHhcchH----HHHHHHHHHHHHHHHHHH
Confidence            999999999633 3445777766   78888887777666777889999988888876    678889999999999999


Q ss_pred             hccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCccC---------
Q 015768          305 LSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGACG---------  355 (400)
Q Consensus       305 L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~~---------  355 (400)
                      |++++.+. |..|.                .+-.+.+.+..   +.++. ..+++.-.+.   +.-|....         
T Consensus       281 L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~g---~~~~a-~~f~~~L~l~~~a~SlGg~~SLi~~p~~~t  356 (398)
T d1qgna_         281 LEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG---DLLTT-AKFVDALKIPYIAPSFGGCESIVDQPAIMS  356 (398)
T ss_dssp             HHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS---CHHHH-HHHHHHCSSSEECSCCCSSSCEEECHHHHH
T ss_pred             HHhCCCeeecCCCCCCCCcchhhhhhhcCCCCceeeeeecC---CHHHH-HHHHHcCCcceeeeCCCCCcceeeCcchhc
Confidence            99887632 22221                13334445543   22222 2233333332   22222110         


Q ss_pred             --------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768          356 --------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       356 --------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~  385 (400)
                                    .++.||||++.   |+.+++++.|++||.+
T Consensus       357 h~~~~~~~~~~~Gi~~~liRlSvGl---Ed~eDLi~Dl~~AL~~  397 (398)
T d1qgna_         357 YWDLSQSDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS  397 (398)
T ss_dssp             STTSCHHHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHhc
Confidence                          14689999997   6666788888888875

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=5.9e-23  Score=189.51  Aligned_cols=329  Identities=13%  Similarity=0.099  Sum_probs=230.3

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....+   .-..+.+..+++.+........+.+++++++++|++
T Consensus        34 ~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~---~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e  110 (387)
T d1vefa1          34 AEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQ---TLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANE  110 (387)
T ss_dssp             TTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCT---TSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEEcchhHHhhhhcCCcHHHHHHHHHHHHhhccccc---ccCCchHHHHHHHhhhhccccceeeccccCchHHHH
Confidence            4678999997754  4565 689999999999886432222   112356666777766554434467999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSKTLHPDADWLEKTLETKPTPKLV  168 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v  168 (400)
                      .+++...  .....|+....+|++....... .|.            .+..+ |.      .|.+.+++.+.++  +.+|
T Consensus       111 ~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~-p~------~d~~~l~~~~~~~--iAav  181 (387)
T d1vefa1         111 AALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFI-PY------NDVEALKRAVDEE--TAAV  181 (387)
T ss_dssp             HHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEE-CT------TCHHHHHHHCCTT--EEEE
T ss_pred             HHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEe-CC------CCHHHHHHhcCCC--eEEE
Confidence            9999874  2346899999999886644322 221            22233 32      2788999988754  4888


Q ss_pred             EEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC--CCcEEEEeccccccCCCcceeEEEE
Q 015768          169 SVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       169 ~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      +++..+...|. ..+++.+++|.++|++||+++|.||++.+|...|.......  -..|++  +++|.++ .|..++.++
T Consensus       182 i~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~--~~gK~l~-gG~~~~~~~  258 (387)
T d1vefa1         182 ILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALG-GGVPLGVAV  258 (387)
T ss_dssp             EECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-TTSSCEEEE
T ss_pred             EEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCcee--eecccCC-CCccccccc
Confidence            87755555675 57889999999999999999999999998754443222111  122333  5579997 788889988


Q ss_pred             ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc--CCCCceEEE
Q 015768          246 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLW  323 (400)
Q Consensus       246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~  323 (400)
                      ..   ++..+.+.......+++.++++..++.+.|+..++  .+..++..+..+++.+.|+++....+.  ... |.+..
T Consensus       259 ~~---~~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~--~~~~~~v~~~g~~l~~~L~~l~~~~v~~vrg~-Gl~~~  332 (387)
T d1vefa1         259 MR---EEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGM-GLMVG  332 (387)
T ss_dssp             EE---HHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEE-TTEEE
T ss_pred             cc---eeeeeccccCCccccCCCCcchhhhcccchhhccc--ccccchHhhhhHHHHHHHHhcCCCceEEEeec-ceEEE
Confidence            88   67777666666678889999999999999885222  355667777788888888876442222  222 45556


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +.+.+.  ....+.. ++.+.|+.+.+.    .++.+|++++. .|+++++++++++++++
T Consensus       333 ie~~~~--~~~~~~~-~~~~~g~l~~~~----g~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         333 LELKEK--AAPYIAR-LEKEHRVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             EEESSC--SHHHHHH-HHHHHCEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEeCC--chHHHHH-HHHHCCCeEEec----CCCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence            676643  2444444 445778877653    35789999876 89999999999999987

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=8e-23  Score=189.67  Aligned_cols=320  Identities=13%  Similarity=0.059  Sum_probs=218.0

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhc---CCCCE
Q 015768           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLC---DAGDS  115 (400)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~---~~gd~  115 (400)
                      +.|++|+++|.    .+....++  ....++.+.+.+.+++.++    .+++.|++|+|+|++++.++.++.   ++||+
T Consensus        13 ~v~~~V~~Am~----~~~~~hr~--~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~   86 (382)
T d2bkwa1          13 ILSGAVQKALD----VPSLGHTS--PEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKN   86 (382)
T ss_dssp             CCCHHHHHTTS----CCCCCTTS--HHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCE
T ss_pred             CCCHHHHHHhC----cccCCCCc--HHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCc
Confidence            35677777652    22222221  2233444444555555554    356789999999999999999986   68999


Q ss_pred             EEEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015768          116 VVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC  193 (400)
Q Consensus       116 vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~  193 (400)
                      |++...++++..  ...+..|.....+ ...+.+...+.+.+++.+...+ ++++++++.+|.||...+   +..+.+.|
T Consensus        87 vlv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~tg~~~~---~~~~~~~~  161 (382)
T d2bkwa1          87 VLVVSTGTFSDRFADCLRSYGAQVDVV-RPLKIGESVPLELITEKLSQNS-YGAVTVTHVDTSTAVLSD---LKAISQAI  161 (382)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTCEEEEE-CCSSTTSCCCHHHHHHHHHHSC-CSEEEEESEETTTTEECC---HHHHHHHH
T ss_pred             eEEEEechhhhhhhhhccccccccccc-cccCCCCccchhHHHHHhhhcc-chheeeeecccccccccc---chhhhhhc
Confidence            999988876643  4556778877766 5555665678888888776433 589999999999999999   77777777


Q ss_pred             HHc--CCEEEEcccccccccCCCCccccCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHH-----------
Q 015768          194 KAA--GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK-----------  259 (400)
Q Consensus       194 ~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~-----------  259 (400)
                      ++|  ++++++|.+++   .+..+......+.++++.|.+|++ |.+|  +|+++.+   ++..+++..           
T Consensus       162 ~~~~~~~~~~vDa~qs---~g~~pid~~~~giD~~~~s~~K~l~gP~G--~g~l~vs---~~~~~~~~~~~~~~~~~~~~  233 (382)
T d2bkwa1         162 KQTSPETFFVVDAVCS---IGCEEFEFDEWGVDFALTASQKAIGAPAG--LSISLCS---SRFMDYALNDSKNGHVHGYF  233 (382)
T ss_dssp             HHHCTTSEEEEECTTT---TTTSCCCTTTTTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHHHTCHHHHCCCSCST
T ss_pred             cccccceeeeeecccc---cccccccccccCeeEEeecccccCcCCCc--hhhhhcc---HHHHhhhhhcccCCCcccch
Confidence            666  59999999999   444556566678899999999999 4444  7888888   555544321           


Q ss_pred             ---------------hhccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccC---C--CC
Q 015768          260 ---------------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG---G--EG  318 (400)
Q Consensus       260 ---------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~---~--~~  318 (400)
                                     ....+..+++....+++..+|+... +......++.+++++++++.+..........   .  ..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s  313 (382)
T d2bkwa1         234 SSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSA  313 (382)
T ss_dssp             TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBC
T ss_pred             hhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhccC
Confidence                           1123455788888888888887422 2356666777788888888887643322211   1  11


Q ss_pred             ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-CCCCeEEEE-ecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-GCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      ..++.+.++    +..++...| +++||.+..|... ..++.+||+ ++. .++++++.+++.|......+
T Consensus       314 ~~v~~~~~~----~~~~~~~~L-~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L  379 (382)
T d2bkwa1         314 HGLTAVYVA----DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLAL  379 (382)
T ss_dssp             SSCEEEECS----CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHT
T ss_pred             CcEEEEcCC----CHHHHHHHH-HHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            223445665    467777765 6899999988654 246789999 776 56677777777775544443

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.90  E-value=6.8e-22  Score=181.90  Aligned_cols=319  Identities=14%  Similarity=0.111  Sum_probs=206.3

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCc--EEEeCChHHHHHHHHHHhcCCCCEE
Q 015768           41 YWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGDSV  116 (400)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~--i~~~~g~t~a~~~~~~~l~~~gd~v  116 (400)
                      +.+.++.|++++.+.    ....++  ...-.++.++.++++    .|+++++  +++++|+|.+++.++.++..+++.+
T Consensus         8 P~~~~~~V~~A~~~~----~~~~~~~~~~~~~~~~r~~l~~l----~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~   79 (361)
T d1m32a_           8 PLTTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTAL----ATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKV   79 (361)
T ss_dssp             SCCCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHH----HCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCE
T ss_pred             CCCCCHHHHHHhhhh----ccCCCcHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCHHHHHHHHHHHhhhhcccc
Confidence            345677887765432    222221  112234455555554    4888765  7788899999999999999888777


Q ss_pred             EEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCH--HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          117 VMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDA--DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       117 lv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~--e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      ++....++...  ...+..+.....+ ...... ....  +.......++  ++++.+++.+|.||...|   +++|.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~--~~~v~~~~~~~~tG~~~~---i~~i~~~  152 (361)
T d1m32a_          80 LIVSNGAYGARMVEMAGLMGIAHHAY-DCGEVA-RPDVQAIDAILNADPT--ISHIAMVHSETTTGMLNP---IDEVGAL  152 (361)
T ss_dssp             EEEESSHHHHHHHHHHHHHTCCEEEE-ECCTTS-CCCHHHHHHHHHHCTT--CCEEEEESEETTTTEECC---HHHHHHH
T ss_pred             ceeeehhhhhhHHHHhhhhhcccccc-cccccC-CccchhhHHHHHhccC--ccceEEEeeecccccchh---hhhhhhh
Confidence            77766554422  3334445444444 333222 2233  3333333344  499999999999999999   8999999


Q ss_pred             HHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH--------------
Q 015768          193 CKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL--------------  258 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~--------------  258 (400)
                      |++||+++++|.+++.+   ..+......+.+++++|.+|+++.| ..+|+++.+   ++..++.+              
T Consensus       153 ~~~~g~~~~vDa~qs~G---~~~~d~~~~~~D~~~~s~~K~l~gp-~G~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T d1m32a_         153 AHRYGKTYIVDAMSSFG---GIPMDIAALHIDYLISSANKCIQGV-PGFAFVIAR---EQKLAACKGHSRSLSLDLYAQW  225 (361)
T ss_dssp             HHHHTCEEEEECTTTTT---TSCCCTTTTTCSEEEEESSSTTCCC-SSEEEEEEE---HHHHTTCTTCCSCSTTCHHHHH
T ss_pred             hcccceeeEeecccccC---cccccccccccceEEeeecccccCC-CCceEEEec---hhhhhhhccccccccccchhhh
Confidence            99999999999999943   3344455667889999999999532 346777776   34332221              


Q ss_pred             ----HhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC--CCceEEEeeCCCC-
Q 015768          259 ----KVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGAIYLWARLPEK-  329 (400)
Q Consensus       259 ----~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~-  329 (400)
                          ........+++.....++...+....  .......++.....+.+.+.++..+......+  .+...+.+.+|+. 
T Consensus       226 ~~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~  305 (361)
T d1m32a_         226 RCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDP  305 (361)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCT
T ss_pred             ccccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCcEEEEECCCCC
Confidence                12223445667777777666665311  12344455666667778888887765322222  2234556677653 


Q ss_pred             CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec-cCCHHHHHHHHHHHHHHH
Q 015768          330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-GLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~~~~~~~~~l~~~l  383 (400)
                      ..+..+++..| .++||.+.+|... .++.+||++. .++++|++++++.|+++|
T Consensus       306 ~~~~~~~~~~l-~~~gi~i~~G~~~-~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         306 QYRFSEFYRRL-KEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             TCCHHHHHHHH-HHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHH-HHCCcEEECCCcC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            34677888877 4899999887543 4678999953 589999999999999875

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.90  E-value=1.7e-22  Score=182.61  Aligned_cols=321  Identities=13%  Similarity=0.070  Sum_probs=199.7

Q ss_pred             CCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 015768           38 GVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV  117 (400)
Q Consensus        38 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vl  117 (400)
                      +++..+++|+|++|+.+..... ..+|++....+++|+.+++++    |.++++|++|+|+|++++.++..+.++++.++
T Consensus         6 nd~~~g~~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~----g~~~~~v~~tsggtean~~a~~~~~~~~~~~~   80 (340)
T d1svva_           6 NDYSVGMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELL----ERPDADVHFISGGTQTNLIACSLALRPWEAVI   80 (340)
T ss_dssp             CSCSSCCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHH----TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEE
T ss_pred             cCCCCCCCHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHh----CCCcceEEEcCCHHHHHHHHHHHHhhhccccc
Confidence            3555678999999999876654 445765555556666666666    88889999999999999999999999999999


Q ss_pred             EeCCCccchhHH--HHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768          118 MFAPYYFNSYMS--FQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (400)
Q Consensus       118 v~~p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~  191 (400)
                      +..+.|..+...  ....+...... .....  ..+.+.......    .......++++...|+.|.+.+.+++..+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (340)
T d1svva_          81 ATQLGHISTHETGAIEATGHKVVTA-PCPDG--KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISA  157 (340)
T ss_dssp             EETTSHHHHSSTTHHHHTTCCEEEE-CCTTS--CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHH
T ss_pred             cccccceeeeecccccccceeeeec-ccccc--cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhc
Confidence            999888665532  22333333333 22212  123333333322    1221244455555566778888899999999


Q ss_pred             HHHHcCCEEEEcccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH--hhccCC
Q 015768          192 LCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK--VQDNIP  265 (400)
Q Consensus       192 l~~~~~~~li~D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~--~~~~~~  265 (400)
                      .|++++.++++|+++.............    .....+...+..|..+  +...++.....   ........  ......
T Consensus       158 ~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~  232 (340)
T d1svva_         158 SCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILND---ALKPNARHLIKQRGAL  232 (340)
T ss_dssp             HHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSG---GGCTTHHHHHHHTTCC
T ss_pred             ccccccceeeeeccceeeeecccccccccccccccceeeecCCccccc--cccccccccch---hhhhhhhhhcccccCc
Confidence            9999999999999997555432221111    1122344445555443  33445555442   22222221  112222


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  345 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  345 (400)
                      .........++...++.  .......++...++.++.+.|+..+. .+..|..++++++.++.      .....|+ +++
T Consensus       233 ~~~~~~~~aa~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~p~~~~~v~~~~~~------~~~~~l~-~~~  302 (340)
T d1svva_         233 MAKGWLLGIQFEVLMKD--NLFFELGAHSNKMAAILKAGLEACGI-RLAWPSASNQLFPILEN------TMIAELN-NDF  302 (340)
T ss_dssp             CTTTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCCSSSEECBEEEH------HHHHHHT-TTE
T ss_pred             cchhhHHHHHHHHHhhh--hHHHHHHHHHHHHHhhhHHHHhcCCC-eeecCCCceEEEEeCCH------HHHHHHH-Hhh
Confidence            23333344444444443  23356667788888999999998876 55555558888887752      4455565 343


Q ss_pred             eEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768          346 VVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  381 (400)
Q Consensus       346 i~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  381 (400)
                      +..........++.+|++++. +|++|+++++++|++
T Consensus       303 ~~~~~~~~~~~~~~vR~s~~~~~t~edid~~l~~l~~  339 (340)
T d1svva_         303 DMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKR  339 (340)
T ss_dssp             ECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hhhcccccCCCCcEEEEECCCCCCHHHHHHHHHHHhc
Confidence            332211112347889999887 899999999999876

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.90  E-value=5.5e-22  Score=184.38  Aligned_cols=344  Identities=10%  Similarity=0.044  Sum_probs=223.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++|+.+.+.+....   .........+.+++.+....+  .+.+.++.++++++.
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~sgs~a~~  110 (404)
T d1z7da1          36 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTIC---SRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANE  110 (404)
T ss_dssp             TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCC---CTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHH
T ss_pred             CCCCEEEEccccHHHHhhhcCcHHHHHHHHHHHHhCCCc---ccccchHHHHHHHHhhhhccc--cceeeeeccccchHH
Confidence            4678999998874  4555 6899999999988764321   111223334455555554444  478999999999999


Q ss_pred             HHHHHhc----------CCCCEEEEeCCCccchhHHHHhcCc----EEEEeccCCCCCC---CCCHHHHHHhhccCCCCe
Q 015768          104 NIVLTLC----------DAGDSVVMFAPYYFNSYMSFQMTGV----THILVGPCSSKTL---HPDADWLEKTLETKPTPK  166 (400)
Q Consensus       104 ~~~~~l~----------~~gd~vlv~~p~~~~~~~~~~~~g~----~~~~~~~~~~~~~---~~~~e~l~~~l~~~~~~~  166 (400)
                      .+++...          .....++....+|++..........    +.... |..+.-.   .-+.+.++..+.+.. +.
T Consensus       111 ~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-iA  188 (404)
T d1z7da1         111 TAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFG-PFAPQFSKVPYDDLEALEEELKDPN-VC  188 (404)
T ss_dssp             HHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------CEEEECTTCHHHHHHHHTSTT-EE
T ss_pred             HHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCC-CCCccccccccchHHHHHHHhcCCC-EE
Confidence            9988753          1224688888888765533222111    00001 1111000   115677777665443 67


Q ss_pred             EEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768          167 LVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  245 (400)
Q Consensus       167 ~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~  245 (400)
                      +|+++..+...|. .++++.+++|.++|++||+++|+||++.+|...+........+....+-+++|.+|.++..+|.++
T Consensus       189 avi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDivt~gK~l~gG~~p~~~v~  268 (404)
T d1z7da1         189 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVL  268 (404)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEE
T ss_pred             EEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEEEEcccccCCCCCccccc
Confidence            8887766666776 467888999999999999999999999877544433222211111123367899973337899999


Q ss_pred             ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768          246 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  323 (400)
Q Consensus       246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  323 (400)
                      .+   +++.+.+.......+++.++++..++.+.|+..  ++..++..+.-....+.+.+.+++.+.+.-+... |.+..
T Consensus       269 ~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg~-Gl~~~  344 (404)
T d1z7da1         269 AN---DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGK-GLLCA  344 (404)
T ss_dssp             EC---HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEE-TTEEE
T ss_pred             ch---HHHHccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEEee-CcEEE
Confidence            99   788777777667778899999999999988741  2333444444455556666777776664444444 45556


Q ss_pred             eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      +.+........++...+. ++||++.+.    .++.|||.++. +|++++++++++|.++++++
T Consensus       345 i~~~~~~~~~~~~~~~l~-~~Gl~~~~~----~~~~ir~~Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         345 IEFKNELVNVLDICLKLK-ENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             EEECTTTCCHHHHHHHHH-HTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCcccHHHHHHHHH-hCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHhh
Confidence            676654445667777776 799998653    35789999776 79999999999999999886

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.7e-21  Score=176.32  Aligned_cols=288  Identities=16%  Similarity=0.111  Sum_probs=207.7

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~  143 (400)
                      .......+.+++.+++..|  .+..+++++|+.|+..++.+++++||+|++....|.+....+    ...|+++.++ ..
T Consensus        54 R~~nPt~~~le~~la~LEg--~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~-d~  130 (391)
T d1cl1a_          54 RRGTLTHFSLQQAMCELEG--GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWF-DP  130 (391)
T ss_dssp             TTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CT
T ss_pred             CCCChhHHHHHHHHHHHhC--CccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhcccccccccccc-cC
Confidence            3345667777777777766  467899999999999999999999999999999998877665    4568888877 32


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCC
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                            .|.+++++.+++++  ++|+++.|.||+..+.|   +++++++|++  +|+++++|+++.....    ..+...
T Consensus       131 ------~d~~~~~~~i~~~t--~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~~----~~Pl~~  195 (391)
T d1cl1a_         131 ------LIGADIVKHLQPNT--KIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL----FKALDF  195 (391)
T ss_dssp             ------TCGGGGGGTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS----SCGGGG
T ss_pred             ------cccccccccccccc--ceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchhh----hccccc
Confidence                  26778888888776  99999999999999999   8888888866  4999999999874332    233456


Q ss_pred             CcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  300 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (400)
                      +.++++.|++|.++. ...-.|.++.+   ++..+.+..........+++...+.+...|+.    +.-+++++.+++..
T Consensus       196 GaDivvhS~TKy~~GhsdvlgG~vv~~---~~~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T----L~lR~~~~~~nA~~  268 (391)
T d1cl1a_         196 GIDVSIQAATKYLVGHSDAMIGTAVCN---ARCWEQLRENAYLMGQMVDADTAYITSRGLRT----LGVRLRQHHESSLK  268 (391)
T ss_dssp             TCSEEEEETTTTTTCSSSCCCEEEEEC---TTTHHHHHHHHHHTTCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred             ccceEEeecchhccccccccccceecc---ccccccchhhhhcccccCCchhhhhhhccchh----HHHHHHHHHHHHHH
Confidence            778999999999963 33456777766   45666666555555667788888888888876    67888999999999


Q ss_pred             HHHHhccCCCCc-ccCC-----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc-----
Q 015768          301 IREALSPLGEGA-VKGG-----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC-----  354 (400)
Q Consensus       301 l~~~L~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~-----  354 (400)
                      +.+.|++++.+. +..|                 .++.+ .+.+.... +.++... .++.-.++   +.-|...     
T Consensus       269 vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~-sf~l~~~~-~~e~~~~-f~d~L~l~~~a~SlG~~~SLi~~  345 (391)
T d1cl1a_         269 VAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLF-SFVLKKKL-NNEELAN-YLDNFSLFSMAYSWGGYESLILA  345 (391)
T ss_dssp             HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEE-EEEESSCC-CHHHHHH-HHTTCSSCBCCSCCCSSSCEEEE
T ss_pred             HHHHHHhcccccccccccccchhhHHHHhhccCCCCcce-eeeecCCC-CHHHHHH-HHHcCCcceEeeCCCCCccceeC
Confidence            999999887632 2211                 12332 33343221 3444443 33333322   1222211     


Q ss_pred             ---------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          355 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       355 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                     + .++.||+|++.   |+.+++++.|++||+++
T Consensus       346 ~~~~~~~~~~~~~~~gi~~~liRlSVGl---Ed~eDLi~Dl~~AL~~i  390 (391)
T d1cl1a_         346 NQPEHIAAIRPQGEIDFSGTLIRLHIGL---EDVDDLIADLDAGFARI  390 (391)
T ss_dssp             ECHHHHHHTSTTCCCCCCSCEEEEECCS---SCHHHHHHHHHHHHHHT
T ss_pred             CcccccccCCchHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                           1 14579999997   77778888899998875

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.1e-21  Score=184.20  Aligned_cols=351  Identities=13%  Similarity=-0.026  Sum_probs=245.8

Q ss_pred             hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-----cEEEeCChHHH
Q 015768           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-----SVMVTAGANQA  101 (400)
Q Consensus        27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-----~i~~~~g~t~a  101 (400)
                      -+|++..+|.+..+. .++|++.+.+.+.+.++ ...+...+...+++..+.+++++.+|.+..     .-.+|+|+|+|
T Consensus        50 ~dg~~~~n~asf~~t-~~~~~~~~l~~~~~~~N-~~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgSeA  127 (450)
T d1pmma_          50 LDGNARQNLATFCQT-WDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEA  127 (450)
T ss_dssp             GSCCGGGBCSCCSCC-CCCHHHHHHHHHTTTCB-TTCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHHHH
T ss_pred             cCCCccccccccccC-CCCHHHHHHHHHHHhcC-CCCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchHHH
Confidence            345555666554333 35678888888887765 344444455678999999999999987532     25899999999


Q ss_pred             HHHHHHHhcC-----------CC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEE
Q 015768          102 FVNIVLTLCD-----------AG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS  169 (400)
Q Consensus       102 ~~~~~~~l~~-----------~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~  169 (400)
                      +..++.+...           ++ ..++++...|.++..+++..|+++..+ |.+++++.+|++.+++++++++  .+|+
T Consensus       128 ~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v-~~~~~~~~~d~~~L~~~i~~~t--~~Vv  204 (450)
T d1pmma_         128 CMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREI-PMRPGQLFMDPKRMIEACDENT--IGVV  204 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEEC-CCBTTBCSCCHHHHHHHCCTTE--EEEE
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEe-eecCCCCcCcHHHHHHHhhhCc--eEEE
Confidence            9998887531           22 357888889999999999999999999 8887777899999999998876  8888


Q ss_pred             EeCCCCCCccCCCHHHHHHHHH---HHHHcCCEEEEccccccccc--CCC--CccccCCCcEEEEeccccccCCCcceeE
Q 015768          170 VVNPGNPSGTYIPERLLKRISD---LCKAAGSWLVVDNTYEYFMY--DGR--KHCCVEGDHVVNLFSFSKAYGMMGWRVG  242 (400)
Q Consensus       170 l~~p~nptG~~~~~~~l~~i~~---l~~~~~~~li~D~a~~~~~~--~~~--~~~~~~~~~~i~~~s~sK~~g~~g~~~G  242 (400)
                      .+.+++.||.+-|.+++.+|.+   .|+++|+|+++|.+++++..  ...  .....-...+.+..|.||+++ ....+|
T Consensus       205 ~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s~HK~~~-~p~g~g  283 (450)
T d1pmma_         205 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGL-APLGCG  283 (450)
T ss_dssp             CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCSSCE
T ss_pred             eeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecChhhccC-CCCCee
Confidence            8899999999999776665554   35678999999999986542  111  111222457788899999875 556789


Q ss_pred             EEEccCCcHHHHHHHHHhh----------ccCCcCccH---HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          243 YIAYPSEVEGFATQLLKVQ----------DNIPICASI---ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       243 ~i~~~~~~~~~~~~l~~~~----------~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      ++..++  ++.........          ....++-+.   ..+++....+  +.+.+.+..++..++++++.+.|++.+
T Consensus       284 ~l~~r~--~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~~~  359 (450)
T d1pmma_         284 WVIWRD--EEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL--GREGYTKVQNASYQVAAYLADEIAKLG  359 (450)
T ss_dssp             EEEESS--GGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             EEEecC--hhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999886  33221111000          011112222   2233333333  456678999999999999999999988


Q ss_pred             CCcccCC----CCceEEEeeCCCC---CCCHHHHHHHHHHhcCeEEeCCCc---cCCCCeEEEEecc-CCHHHHHHHHHH
Q 015768          310 EGAVKGG----EGAIYLWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGA---CGCRGHLRISFGG-LVEDDCKAAADR  378 (400)
Q Consensus       310 ~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~---~~~~~~iRi~~~~-~~~~~~~~~~~~  378 (400)
                      .+.+..+    .....+.+++...   ..+..++...|. ++|..+.....   ......+|+.+.. +|+++++++++.
T Consensus       360 ~~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~-~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~d  438 (450)
T d1pmma_         360 PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLR-LRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLED  438 (450)
T ss_dssp             CEEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHHH-TTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHH
T ss_pred             CeEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHHH-HcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHH
Confidence            7555432    2234566665432   245677887775 88976632111   1124579999887 899999999999


Q ss_pred             HHHHHHHHhc
Q 015768          379 LRRGLEELVK  388 (400)
Q Consensus       379 l~~~l~~~~~  388 (400)
                      |+++++.+.+
T Consensus       439 l~~~v~~l~~  448 (450)
T d1pmma_         439 YKASLKYLSD  448 (450)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998865

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.90  E-value=3.4e-21  Score=178.16  Aligned_cols=321  Identities=12%  Similarity=0.104  Sum_probs=225.9

Q ss_pred             CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEE
Q 015768           40 VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVV  117 (400)
Q Consensus        40 ~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vl  117 (400)
                      ++|| ...+-++++.+.++++.. .+....-...+++.+++++    |  ...++.+++||.|+..++.++ .++||+|+
T Consensus         6 ~~~p~~~~~~~~~~~~~l~~g~~-~~~~g~~v~~fE~~~a~~~----g--~~~~v~~~SGt~Al~lal~~l~~~~gdeVi   78 (384)
T d1b9ha_           6 PAWPQYDDAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHH----G--AAHALAVTNGTHALELALQVMGVGPGTEVI   78 (384)
T ss_dssp             CCSSCCCHHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHT----T--CSEEEEESCHHHHHHHHHHHTTCCTTCEEE
T ss_pred             CCCCCCCHHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHH----C--cCeEEEeCCHHHHHHHHHHHcCCCCCCEEE
Confidence            4443 456778889999887532 1223444667777777766    5  457899999999999999998 68999999


Q ss_pred             EeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (400)
Q Consensus       118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (400)
                      ++..+|.+...++...|++++++ +.++..+.+|++.+++.+.+++  ++|+   +.+..|...+   +.++.++|++++
T Consensus        79 ~p~~t~~a~~~ai~~~g~~p~~~-d~~~~~~~~d~~~~~~~i~~~t--k~i~---~~~~~g~~~d---~~~i~~~~~~~~  149 (384)
T d1b9ha_          79 VPAFTFISSSQAAQRLGAVTVPV-DVDAATYNLDPEAVAAAVTPRT--KVIM---PVHMAGLMAD---MDALAKISADTG  149 (384)
T ss_dssp             EESSSCTHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEEC---CBCGGGCCCC---HHHHHHHHHHHT
T ss_pred             Eeccccccccccccccccccccc-cccccccccchhhhcccccccc--cccc---cccccccccc---cccchhhhhhhh
Confidence            99999999999999999999999 8888888999999999998776  8876   4567888888   888899999999


Q ss_pred             CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--------------
Q 015768          198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------------  263 (400)
Q Consensus       198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--------------  263 (400)
                      +++|+|.+++.+..-........++..++.++.+|.++  ....|.+++++  +++.++++..+..              
T Consensus       150 i~lieD~a~a~ga~~~g~~~g~~g~~~~~Sf~~~K~i~--~g~GG~i~t~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~  225 (384)
T d1b9ha_         150 VPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMT--AGEGGAVVFPD--GETEKYETAFLRHSCGRPRDDRRYFHK  225 (384)
T ss_dssp             CCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSC--SSSCEEEEECT--TCHHHHHHHHHHTBTTCCTTCSSCCCC
T ss_pred             hhhhhhhceecccccCCEecCcccccceeccccccccc--ccccchhhhhh--HHHHHHHHHHHhcCCCCcccccccccc
Confidence            99999999987664322333334555666666799885  23468887776  6777766654421              


Q ss_pred             ---CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-----C-CCceEEEeeCCCCCC-CH
Q 015768          264 ---IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-----G-EGAIYLWARLPEKHL-DD  333 (400)
Q Consensus       264 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~-~~~~~~~~~~~~~~~-~~  333 (400)
                         ..+.++.+....+...|+.    +++..++-+++.+++.+.|++++.+....     . ...++..+.++.... ..
T Consensus       226 ~~G~n~rms~l~Aaig~~qL~~----ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  301 (384)
T d1b9ha_         226 IAGSNMRLNEFSASVLRAQLAR----LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERR  301 (384)
T ss_dssp             SCCCBCBCBHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHH
T ss_pred             ccccccccccchhhhhhhhhhh----cccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceecccccccH
Confidence               2234566665555556654    55666666777888888888876532211     1 112334444543221 23


Q ss_pred             HHHHHHHHHhcCeEEeCCCcc----------CC-------------------CCeEEEEecc-CC-HHHHHHHHHHHHHH
Q 015768          334 FEVVRWLAHRHGVVVIPGGAC----------GC-------------------RGHLRISFGG-LV-EDDCKAAADRLRRG  382 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~----------~~-------------------~~~iRi~~~~-~~-~~~~~~~~~~l~~~  382 (400)
                      +++...| +++||.+.+....          +.                   ...+.|-++. ++ ++|++..++.|+++
T Consensus       302 d~l~~~L-~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~  380 (384)
T d1b9ha_         302 NALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADA  380 (384)
T ss_dssp             HHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHHHHHHHHHHHH
Confidence            4677777 5899988654211          00                   1357776665 66 57999999999998


Q ss_pred             HHH
Q 015768          383 LEE  385 (400)
Q Consensus       383 l~~  385 (400)
                      +++
T Consensus       381 l~~  383 (384)
T d1b9ha_         381 VAR  383 (384)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            864

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3e-21  Score=180.25  Aligned_cols=344  Identities=12%  Similarity=0.071  Sum_probs=226.6

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..|.  ..++ .+|++++++.+.+.+.....+ ..... +-...+++.+.+.....-+.+++++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~-~~~~~-~~~~~l~~~l~~~~~~~~~~v~f~~sGseA~e  117 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF-GGITH-APAIELCRKLVAMTPQPLECVFLADSGSVAVE  117 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCC-SSEEC-HHHHHHHHHHHHHSCTTCCEEEEESSHHHHHH
T ss_pred             CCCCEEEECcccHHHHhhcCCcHHHHHHHHHHHHhcCCccc-CCccc-hHHHHHHHHHHhhhccCcceeeeccccccchh
Confidence            4678899998875  4455 799999999998876321111 11112 23444555565555545678999999999999


Q ss_pred             HHHHHhc-------CCCCEEEEeCCCccchhHHHHh-cC-------------cEEEEeccCCC--CCCC---CCHHHHHH
Q 015768          104 NIVLTLC-------DAGDSVVMFAPYYFNSYMSFQM-TG-------------VTHILVGPCSS--KTLH---PDADWLEK  157 (400)
Q Consensus       104 ~~~~~l~-------~~gd~vlv~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~~--~~~~---~~~e~l~~  157 (400)
                      .+++...       .+..+|+....+|++....... .+             ...... |...  ....   .+++.+++
T Consensus       118 ~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  196 (429)
T d1s0aa_         118 VAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFA-PAPQSRMDGEWDERDMVGFAR  196 (429)
T ss_dssp             HHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEE-CCCCSBC-CCCCGGGGHHHHH
T ss_pred             hhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccc-cccccccccccchhhhhhhhh
Confidence            9998764       2336899999998876543321 11             011112 2111  1111   23555555


Q ss_pred             hhc-cCCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768          158 TLE-TKPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY  234 (400)
Q Consensus       158 ~l~-~~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  234 (400)
                      .+. ....+.+++++.. ++..|. .+|++.+++|.++|++||+++|.||++.++...+........+....+.+++|.+
T Consensus       197 ~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~~gK~l  276 (429)
T d1s0aa_         197 LMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKAL  276 (429)
T ss_dssp             HHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGG
T ss_pred             hhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccccccccccccceeccccccccccc
Confidence            554 2334677777754 355555 5789999999999999999999999999885544333222222111233557999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC-
Q 015768          235 GMMGWRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-  308 (400)
Q Consensus       235 g~~g~~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  308 (400)
                      +.++..+|.++.+   +++.+.+...     ....+++.++++..++.+.|+.-++  ++..++..+..+++++.|+++ 
T Consensus       277 ~gG~~p~~av~~~---~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~--~~~~~~~~~~g~~l~~~L~~l~  351 (429)
T d1s0aa_         277 TGGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAPAR  351 (429)
T ss_dssp             GTSSSCCEEEEEC---HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGGGG
T ss_pred             ccccccccchhhH---HHHHhccCCCCCcceeecCCCCCCcccchhhhcccccccc--ccccchhhHHHHHHHHHHHHhc
Confidence            7455899999999   7887777542     2356888999999999999885221  344556666667777777654 


Q ss_pred             --CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          309 --GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       309 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                        +.+.-+... |.+..+.+.... ...++..+++ ++|+++.+.     .+.+|+++.. .|++|+++++++|.+++++
T Consensus       352 ~~~~v~~vrg~-Gl~~~~e~~~~~-~~~~~~~~~~-~~Gl~~~~~-----g~~i~~~Ppl~it~~eid~~~~~l~~al~e  423 (429)
T d1s0aa_         352 DAEMVADVRVL-GAIGVVETTHPV-NMAALQKFFV-EQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAVQD  423 (429)
T ss_dssp             GCTTEEEEEEE-TTEEEEEESSCB-CHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred             cCCceEEEeec-ccEEEEEecCcc-cHHHHHHHHH-HCCcEEEec-----CCEEEEeCCcCCCHHHHHHHHHHHHHHHHh
Confidence              222222233 556566665433 5667777776 789999763     4789999776 8999999999999999876


Q ss_pred             H
Q 015768          386 L  386 (400)
Q Consensus       386 ~  386 (400)
                      .
T Consensus       424 ~  424 (429)
T d1s0aa_         424 E  424 (429)
T ss_dssp             G
T ss_pred             h
Confidence            4

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.89  E-value=2.3e-21  Score=181.40  Aligned_cols=334  Identities=13%  Similarity=0.073  Sum_probs=212.0

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++++++.+.+.+.....  .   .......+++.+....+ ..+.+++++++++|++
T Consensus        49 ~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~~~~~--~---~~~~~~~la~~~~~~~~-~~~~v~f~~sGseA~e  122 (427)
T d2gsaa_          49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFG--A---PCALENVLAEMVNDAVP-SIEMVRFVNSGTEACM  122 (427)
T ss_dssp             TTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTCSCCS--S---CCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhcCccc--c---chhHHHHHHHHHHhhCC-ccccccccCCcHHHHH
Confidence            5678999998774  4444 68999999999998743221  1   22455566776665543 3578999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHH--------hcCc------------EEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ--------MTGV------------THILVGPCSSKTLHPDADWLEKTLET  161 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~--------~~g~------------~~~~~~~~~~~~~~~~~e~l~~~l~~  161 (400)
                      .+++...  ....+|+....+|++......        ..+.            +...+ |      .-|++.++++++.
T Consensus       123 ~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~------~~~~~~le~~~~~  195 (427)
T d2gsaa_         123 AVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT-P------YNDLEAVKALFAE  195 (427)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEE-C------TTCHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceecc-C------cchHHHHHHHHHh
Confidence            9999764  244789999999988653321        1111            11111 1      1388999999984


Q ss_pred             C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEeccccccCCC
Q 015768          162 K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMM  237 (400)
Q Consensus       162 ~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~g~~  237 (400)
                      . ..+.+|+++..+...|. .+|.+.+++|.++|++||+++|+||++.++.. +........  ..+++  .++|.+| .
T Consensus       196 ~~~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~-g~~~~~~~~gi~PDi~--~~gK~lg-g  271 (427)
T d2gsaa_         196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRI-AYGGVQEKFGVTPDLT--TLGKIIG-G  271 (427)
T ss_dssp             STTTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTT-BTTCHHHHTTCCCSEE--EECGGGG-T
T ss_pred             CCCCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeecccccccee-cccchHHhcCCCHHHH--hhhhccC-C
Confidence            3 33567777755555665 56888999999999999999999999987743 222111111  22333  4579997 7


Q ss_pred             cceeEEEEccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768          238 GWRVGYIAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGA  312 (400)
Q Consensus       238 g~~~G~i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (400)
                      |+.+|.++.+   +++.+.+..   .....+++.++++..++.+.|+...  +..++..+.-....+.+.+..++.+...
T Consensus       272 G~p~~a~~~~---~~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~  348 (427)
T d2gsaa_         272 GLPVGAYGGK---REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAA  348 (427)
T ss_dssp             TSCCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             Ccceeeeeeh---HHHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcCCCc
Confidence            8899999888   677766643   2334678899999999999887422  2223333333333344444444455422


Q ss_pred             ccCCCCceEEEeeCCCCCC--------CH---HHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768          313 VKGGEGAIYLWARLPEKHL--------DD---FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  381 (400)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  381 (400)
                      .....++++-..-......        +.   ..+...++ ++||++.|+..    ..+-+++. +|++|+++++++|++
T Consensus       349 ~v~~~ggm~~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll-~~Gv~l~p~~~----~~~~~~l~-~Te~dId~~l~al~~  422 (427)
T d2gsaa_         349 CGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF----EAGFTSLA-HTEEDIDATLAAART  422 (427)
T ss_dssp             EEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTT-CCHHHHHHHHHHHHH
T ss_pred             EEcccCCeEEEEEeccCCCCHHHhhcccHHHHHHHHHHHH-HCCEEECCCCC----cceeCCCC-CCHHHHHHHHHHHHH
Confidence            2222224432221111111        11   24555665 78999987542    11223444 699999999999999


Q ss_pred             HHHHH
Q 015768          382 GLEEL  386 (400)
Q Consensus       382 ~l~~~  386 (400)
                      +++++
T Consensus       423 al~~L  427 (427)
T d2gsaa_         423 VMSAL  427 (427)
T ss_dssp             HHTCC
T ss_pred             HHHhC
Confidence            98753

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.89  E-value=4.4e-20  Score=168.43  Aligned_cols=290  Identities=20%  Similarity=0.179  Sum_probs=208.5

Q ss_pred             CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEecc
Q 015768           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGP  142 (400)
Q Consensus        67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~  142 (400)
                      .......++.+++.+++..|  .+..+.+++|+.|+..++.+++++||+|++....|.+...    .+...|+.+.++ +
T Consensus        54 sR~~nPT~~~le~~la~LEg--~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~-d  130 (394)
T d1e5ea_          54 TRLGNPTVSNLEGKIAFLEK--TEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-N  130 (394)
T ss_dssp             TTTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-C
T ss_pred             cCCCCHHHHHHHHHHHHHhC--CcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeecc-C
Confidence            33345677777888877766  4678889999999999999999999999999999977654    456789998888 3


Q ss_pred             CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEcccccccccCCCCccccCC
Q 015768          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK-AAGSWLVVDNTYEYFMYDGRKHCCVEG  221 (400)
Q Consensus       143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~-~~~~~li~D~a~~~~~~~~~~~~~~~~  221 (400)
                      ..      |.+.+++.+++++  ++|+++.|.||+..+.+   ++++++.++ ++|+++++|.++.....    ..+...
T Consensus       131 ~~------d~~~~~~~i~~~t--~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~~----~~Pl~~  195 (394)
T d1e5ea_         131 TA------IPGEVKKHMKPNT--KIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMI----TNPVDF  195 (394)
T ss_dssp             TT------STTHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTT----CCGGGG
T ss_pred             CC------CHHHHHHhhcccc--cEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCccc----CCchhc
Confidence            22      5678999998887  99999999999999999   888887665 46899999999874322    233455


Q ss_pred             CcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHH--hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768          222 DHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  298 (400)
Q Consensus       222 ~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  298 (400)
                      +.++++.|.+|.++. ...-.|.++.+   .+.....+.  .+......+++...+.+...|+.    +.-+++++.+++
T Consensus       196 GaDiVvhS~TKy~~GhsDv~~G~v~~~---~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T----L~lRm~r~~~nA  268 (394)
T d1e5ea_         196 GVDVVVHSATKYINGHTDVVAGLICGK---ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST----LNIRMKAESENA  268 (394)
T ss_dssp             TCSEEEEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHH
T ss_pred             CCCEEEechhhhcCCCcccccccccch---hhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh----HHHHHHHHHHHH
Confidence            778999999999953 44567878777   555554433  33334556788888988888887    678889999999


Q ss_pred             HHHHHHhccCCCC-cccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE---eCCCccC---
Q 015768          299 EIIREALSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGACG---  355 (400)
Q Consensus       299 ~~l~~~L~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v---~~g~~~~---  355 (400)
                      ..+.+.|++++.+ +|..|                ..|-.+.+.+..    ..+-+..+++.-.++-   .-|....   
T Consensus       269 ~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~~----~~~~a~~f~~~l~l~~~a~SlGg~eSLi~  344 (394)
T d1e5ea_         269 MKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS----GFEGAKKLLDNLKLITLAVSLGGCESLIQ  344 (394)
T ss_dssp             HHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT----HHHHHHHHHHTCSSSEESSCCCSSSCEEE
T ss_pred             HHHHHHHhhcCCccEEeCCCcccccchhhhhcccccCCCeeeeeccC----CHHHHHHHHHhCCccceeeccCCccceeE
Confidence            9999999998773 22222                112233344432    2233334444444322   1121110   


Q ss_pred             --------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768          356 --------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       356 --------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                                          .++.||+|++.   |+.+++++.|.++|+.+.+
T Consensus       345 ~p~~~th~~~~~~~r~~~Gi~~~liRlSVGl---Ed~eDLi~Dl~qAl~~l~~  394 (394)
T d1e5ea_         345 HPASMTHAVVPKEEREAAGITDGMIRLSVGI---EDADELIADFKQGLDALLR  394 (394)
T ss_dssp             CGGGTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHHC
T ss_pred             CccccccccCCHHHHHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHHHhhC
Confidence                                13579999997   7777888888888887653

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=1.8e-20  Score=171.72  Aligned_cols=289  Identities=18%  Similarity=0.172  Sum_probs=200.4

Q ss_pred             CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccC
Q 015768           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC  143 (400)
Q Consensus        68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~  143 (400)
                      ......++.+++.++...|  .+..+++++|+.|+..++.+++++||+|++....|.+....+    ...|+++.++ ..
T Consensus        54 R~~nPT~~~LE~~la~LE~--~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~-d~  130 (421)
T d2ctza1          54 RIMNPTVDVLEKRLAALEG--GKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFT-SR  130 (421)
T ss_dssp             TTBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEEC-CT
T ss_pred             CCCCHHHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceec-cc
Confidence            3345677777777777766  467889999999999999999999999999999998876544    6788998877 32


Q ss_pred             CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH  223 (400)
Q Consensus       144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  223 (400)
                      +     ...+..++.+++++  ++|+++.|.||+..+.|   +++|+++|+++|+++++|++++..   .....+...+.
T Consensus       131 ~-----~~~~~~~~~~~~~t--~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vvDnT~a~t---P~~~~Pl~~Ga  197 (421)
T d2ctza1         131 E-----ERPEEFLALTDEKT--RAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMG---GYLLRPLAWGA  197 (421)
T ss_dssp             T-----CCHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGG---GTSCCGGGGTC
T ss_pred             c-----cCcchhccccCCCc--eEEEEcCCCcceeEecc---hHHHHHHHHhcCCceEeccccccc---ceeccccccCC
Confidence            1     13456666777776  99999999999999999   999999999999999999998621   11123455678


Q ss_pred             EEEEeccccccCC-CcceeEEEEccCCc----------------------------HHHHHHH-HHhhccCCcCccHHHH
Q 015768          224 VVNLFSFSKAYGM-MGWRVGYIAYPSEV----------------------------EGFATQL-LKVQDNIPICASIISQ  273 (400)
Q Consensus       224 ~i~~~s~sK~~g~-~g~~~G~i~~~~~~----------------------------~~~~~~l-~~~~~~~~~~~~~~~~  273 (400)
                      ++++.|.+|.++. ...-.|.++..+..                            ..++.+. ..........+++...
T Consensus       198 DiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sP~~a  277 (421)
T d2ctza1         198 ALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEA  277 (421)
T ss_dssp             SEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHH
T ss_pred             cEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCCHHHH
Confidence            8999999999964 34556777754310                            0011111 1111223556788888


Q ss_pred             HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC-cccCC-----------------CCceEEEeeCCCCCCCHHH
Q 015768          274 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG-AVKGG-----------------EGAIYLWARLPEKHLDDFE  335 (400)
Q Consensus       274 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~  335 (400)
                      +.+...|+.    +.-+++++.+++..+.+.|++++.+ +|..|                 ..|.++.+.+..    ..+
T Consensus       278 ~l~~rgl~T----L~lRm~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~~G~~~sf~l~~----~~~  349 (421)
T d2ctza1         278 WVVLLGMET----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG----GYE  349 (421)
T ss_dssp             HHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT----HHH
T ss_pred             HHHhcCCcc----hhhHHHHHHHHHHHHHhhhccCCCeeEEecCCcCCCccHHHHHHhcCCCCceEEEEEecC----CHH
Confidence            888888887    6788899999999999999988763 22222                 124456666653    233


Q ss_pred             HHHHHHHhcCeE---EeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768          336 VVRWLAHRHGVV---VIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGL  383 (400)
Q Consensus       336 ~~~~l~~~~gi~---v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l  383 (400)
                      .+..+++.-.++   +.-|...                      + .++.||+|++.   |+.+++++.|.+||
T Consensus       350 ~a~~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~GI~~~liRlSvGl---Ed~eDLi~DL~qAL  420 (421)
T d2ctza1         350 AAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL---EHVEDLKAELKEAL  420 (421)
T ss_dssp             HHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCcCeeccccccccceeeCcccccchhCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHhc
Confidence            333344333332   1222211                      0 14689999997   55666777777775

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.88  E-value=6.4e-21  Score=179.94  Aligned_cols=333  Identities=12%  Similarity=0.043  Sum_probs=236.3

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC---------CcEEEeCChHHHHHHHHHHhcC---
Q 015768           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCD---  111 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~---------~~i~~~~g~t~a~~~~~~~l~~---  111 (400)
                      .++.++..+...+.+++...|...+....++..+.+|+.+.+|.+.         ..-++|+|+|+++..++.+...   
T Consensus        85 ~~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~  164 (476)
T d1js3a_          85 SYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV  164 (476)
T ss_dssp             CHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHH
Confidence            5667777676666665566666666778899999999999998753         2468999999999999876531   


Q ss_pred             -------CC---------CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEe
Q 015768          112 -------AG---------DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVV  171 (400)
Q Consensus       112 -------~g---------d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~  171 (400)
                             +|         -.|++++-+|+++..++..+|..+..+ |.++++ .+|+++|++.+++    ...|-+|+.+
T Consensus       165 ~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl~~~~v-~~d~~~-~md~~~L~~~i~~~~~~g~~p~~Vvat  242 (476)
T d1js3a_         165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAI-PSDGKF-AMRASALQEALERDKAAGLIPFFVVAT  242 (476)
T ss_dssp             HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEE-CCCTTS-CCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HhhcccccCcccccccCceEEEecccccHHHHHHHHhcCceEEEe-ccCCCC-CcCHHHHHHHHHHHHhcCCCcEEEeec
Confidence                   11         158889999999999999999999989 888765 7999999999973    2224567777


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-C--CCcEEEEeccccccCCCcceeEEEEccC
Q 015768          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-E--GDHVVNLFSFSKAYGMMGWRVGYIAYPS  248 (400)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~  248 (400)
                      .+++.+|.+-|   +.+|+++|++||+|+++|.+|+++..-..+.... .  ...+-+..++||+++ ....+|.+..++
T Consensus       243 aGtt~~G~iDp---l~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~-~P~~~g~~l~r~  318 (476)
T d1js3a_         243 LGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLL-VNFDCSAMWVKR  318 (476)
T ss_dssp             BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESC
T ss_pred             CCCccceeecc---HHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccceeeecCccccc-cCCcceeecccc
Confidence            88999999999   9999999999999999999998766432222111 1  234567779999987 445788888886


Q ss_pred             CcHHHHHHH--------HHhhc-----------c--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768          249 EVEGFATQL--------LKVQD-----------N--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  307 (400)
Q Consensus       249 ~~~~~~~~l--------~~~~~-----------~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  307 (400)
                        +......        .....           .  .+-....+..++....+  +.+.+.++.++..++++++.+.|++
T Consensus       319 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--G~~g~~~~i~~~~~lA~~l~~~l~~  394 (476)
T d1js3a_         319 --RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY--GVKGLQAYIRKHVQLSHEFEAFVLQ  394 (476)
T ss_dssp             --HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --hHHHHHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHhc
Confidence              3322111        00000           0  01112244445544444  3567889999999999999999999


Q ss_pred             CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768          308 LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+.+++..+...+.+++++.....-.+++.+++.++..+++.+.. ..+..++|++++.  +++++++.+++.|++..++
T Consensus       395 ~~~fel~~~p~l~iV~Fr~~~~d~~n~~l~~~l~~~G~~~~s~t~-~~g~~~lR~~i~n~~Tt~~did~~~~~i~~~a~~  473 (476)
T d1js3a_         395 DPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCR-LRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAE  473 (476)
T ss_dssp             CTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEECCCceEEEEEEccCChHHHHHHHHHHHhcCCEEEeeee-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            988777766556777778754211134677777644335554422 2344589999874  7889999999999999888


Q ss_pred             Hh
Q 015768          386 LV  387 (400)
Q Consensus       386 ~~  387 (400)
                      +.
T Consensus       474 ll  475 (476)
T d1js3a_         474 LL  475 (476)
T ss_dssp             HH
T ss_pred             Hh
Confidence            64

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.88  E-value=2.5e-21  Score=181.62  Aligned_cols=350  Identities=12%  Similarity=0.082  Sum_probs=220.1

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~  103 (400)
                      .+|+.++||..+.  ..++ .+|++.+++.+.+.+.....   .....+....+++.|.+...-..+.+++++++++|++
T Consensus        38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~---~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e  114 (431)
T d1zoda1          38 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLF---SEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNE  114 (431)
T ss_dssp             TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCC---TTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHH
T ss_pred             CCCCEEEEcccCHHhhhhcCCCHHHHHHHHHHHhhccccc---cccccHHHHHHHHHHHHhCCcccceeeecccccchHH
Confidence            4678899998764  5554 78999999999988643211   1112334456777777665434588999999999999


Q ss_pred             HHHHHhc--CCCCEEEEeCCCccchhHHHHhcCc------------EEEEeccCCCC--------CCCC---CHHHHHHh
Q 015768          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSSK--------TLHP---DADWLEKT  158 (400)
Q Consensus       104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~--------~~~~---~~e~l~~~  158 (400)
                      .+++...  ...+.|+....+|++........+.            ....+ +....        ....   +++.+...
T Consensus       115 ~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (431)
T d1zoda1         115 AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAI-PAPFTYRPRFERNGAYDYLAELDYAFDL  193 (431)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEE-CCCCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceee-eeecccccccccccchhhhhhHHHHHHH
Confidence            9999864  3347899999999887654433221            11122 11110        0001   12333333


Q ss_pred             hc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC
Q 015768          159 LE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG  235 (400)
Q Consensus       159 l~--~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g  235 (400)
                      +.  ....+.+++++..+...|. .+|++.+++|.++|++||+++|.||++.++...+........+....+.+++|.++
T Consensus       194 ~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~~gK~l~  273 (431)
T d1zoda1         194 IDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG  273 (431)
T ss_dssp             HHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH
T ss_pred             HHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhccccccc
Confidence            22  2233677887755544565 57889999999999999999999999997655443322211111111335579997


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768          236 MMGWRVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEG  311 (400)
Q Consensus       236 ~~g~~~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (400)
                       .|+.++.++..   ++..+.....  ....+++.++++..++.+.|+..  ++..++..+.-....+.+.+.+++.+.+
T Consensus       274 -gG~p~~av~~~---~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~i  349 (431)
T d1zoda1         274 -AGLPLAAIVTS---AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCI  349 (431)
T ss_dssp             -TTSSCEEEEEC---HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred             -cccccceeeee---ecchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCCCe
Confidence             77888888888   5666555432  24567888999988888887741  2333444444444455556666666654


Q ss_pred             cccCCCCceEEEeeCCC--C---C--CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          312 AVKGGEGAIYLWARLPE--K---H--LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       312 ~~~~~~~~~~~~~~~~~--~---~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      .-+... |.+.-+.+..  .   .  ....++...++ ++|+....-.....++.||++++. +|++++++++++|.+++
T Consensus       350 ~~vrG~-Glm~~ie~~~~~~~~~~~~~~~~~i~~~~~-~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~eid~~~~~l~~al  427 (431)
T d1zoda1         350 GDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAI  427 (431)
T ss_dssp             EEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEeec-ceEEEEEEecCCcccCccHHHHHHHHHHHH-HhCcccCeeeecCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            334444 3333333311  0   0  11355677665 789864221111246789999886 89999999999999999


Q ss_pred             HHH
Q 015768          384 EEL  386 (400)
Q Consensus       384 ~~~  386 (400)
                      ++.
T Consensus       428 ~~v  430 (431)
T d1zoda1         428 ERA  430 (431)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.88  E-value=7.1e-21  Score=179.37  Aligned_cols=297  Identities=11%  Similarity=0.066  Sum_probs=205.5

Q ss_pred             HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccC--CCCC
Q 015768           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSKT  147 (400)
Q Consensus        72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~  147 (400)
                      .+...+..++.+..|.+.....+..|+++++..++.+..  .+++.|+++...|+++...++..|+.++.+ +.  +++.
T Consensus       113 ~~~~~~~~~~~~~~g~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v-~~~~~~~~  191 (434)
T d2z67a1         113 ALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLV-ETVLDGDR  191 (434)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEE-CCEEETTE
T ss_pred             HHHHHHHHHHHHhcCCCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEE-EeecCCCc
Confidence            344445555666677766656666777777777777764  378999999999999999999999998887 43  2334


Q ss_pred             CCCCHHHHHHhhcc---CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCCccccCCC
Q 015768          148 LHPDADWLEKTLET---KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGD  222 (400)
Q Consensus       148 ~~~~~e~l~~~l~~---~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~  222 (400)
                      +.+|+++|++.++.   ...+.+|++++|++++|.+.|   +++|+++|++||+++++|++|+.+...  +.+......+
T Consensus       192 ~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~---l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~  268 (434)
T d2z67a1         192 VYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYR  268 (434)
T ss_dssp             EECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSC
T ss_pred             cCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccC---HHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCC
Confidence            57899999999973   122467888899999999999   999999999999999999999754311  1111122345


Q ss_pred             cEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768          223 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  302 (400)
Q Consensus       223 ~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  302 (400)
                      .+++++|++|.++ .+...|++..++  +++++++.........+.+....++....+.  .+...+..++..+++++++
T Consensus       269 ~D~~~~s~hK~l~-~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~~g~~~~~~~~~~~a~~l~  343 (434)
T d2z67a1         269 VDAVVSSSDKNLL-TPIGGGLVYSTD--AEFIKEISLSYPGRASATPVVNTLVSLLSMG--SKNYLELVKNQKNSKKLLD  343 (434)
T ss_dssp             CSEEEEEHHHHHC-CCSSCEEEEESC--HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEcCccccc-cCCCccccccCc--HHHHHHHHhhcccccccchHHHHHHHHHHHH--HhcchhHHHHHHHHHHHHH
Confidence            6788999999986 344567776665  7788877766554444555555555554444  3445667777777778887


Q ss_pred             HHhccC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCC-------ccCCCCeEEEEecc-C
Q 015768          303 EALSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGG-------ACGCRGHLRISFGG-L  367 (400)
Q Consensus       303 ~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~-------~~~~~~~iRi~~~~-~  367 (400)
                      +.|+++   .+..+........+.+.+.   .+..++...|. +.||...    +..       .+...+++|++++. +
T Consensus       344 ~~L~~l~~~~g~~ll~~~~~~~~~~~~~---~~~~~l~~~L~-~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~  419 (434)
T d2z67a1         344 ELLNDLSKKTGGKFLDVESPIASCISVN---SDPVEIAAKLY-NLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGV  419 (434)
T ss_dssp             HHHHHHHHHSSCCBCCCCCSSEEEEECS---SCHHHHHHHHH-HTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTC
T ss_pred             HHHHHhhhhcCceecCCCCCceeeeecC---CCHHHHHHHHH-HcCCeeeehhhhccccCeeeecccCCCeEEEecCCCC
Confidence            777664   2234444333333444443   25778888775 7888532    111       11235789999887 8


Q ss_pred             CHHHHHHHHHHHHH
Q 015768          368 VEDDCKAAADRLRR  381 (400)
Q Consensus       368 ~~~~~~~~~~~l~~  381 (400)
                      |+||++.++++|++
T Consensus       420 T~edID~~i~~L~k  433 (434)
T d2z67a1         420 RTEDIVNSVSKLEK  433 (434)
T ss_dssp             CHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhc
Confidence            99999999999875

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.88  E-value=1.1e-20  Score=177.72  Aligned_cols=337  Identities=10%  Similarity=0.015  Sum_probs=217.4

Q ss_pred             CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (400)
Q Consensus        30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l  109 (400)
                      .-+|||=+-....++.+..+.    ++..+ --.|+.++...++++.+++++    |  .+.++++++||.|+..++.++
T Consensus        42 ~v~iDl~sDs~t~am~~~~~a----a~~~G-Dd~Y~~dpt~~~lE~~~a~l~----G--~e~al~~~SGt~An~~a~~~l  110 (456)
T d1c7ga_          42 DIYIDLLTDSGTNAMSDKQWA----GMMIG-DEAYAGSENFYHLEKTVKELF----G--FKHIVPTHQGRGAENLLSQLA  110 (456)
T ss_dssp             GCSEECSCSSSCCCEEHHHHH----HTTSC-CCCSSSCHHHHHHHHHHHHHH----C--CSEEEEESSHHHHHHHHHHHH
T ss_pred             ceeeEcccCCCcccchHHHHH----HHhcc-chhccCCchHHHHHHHHHHHh----C--CCeEEECCCHHHHHHHHHHHh
Confidence            446777443333233444433    33222 234777777778888888877    5  467899999999999999999


Q ss_pred             cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC---------CCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCC-
Q 015768          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC---------SSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPS-  177 (400)
Q Consensus       110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~npt-  177 (400)
                      ++|||.|+.... +......+...|+..+.+ ..         ++..+++|++.|++.+++.+  .+.++++++++|+. 
T Consensus       111 ~~~Gd~Vi~~~~-f~~~~~~i~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~g  188 (456)
T d1c7ga_         111 IKPGQYVAGNMY-FTTTRFHQEKNGATFVDI-VRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAG  188 (456)
T ss_dssp             CCTTEEEEESSC-CHHHHHHHHHTTEEEEEC-BCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTT
T ss_pred             cCCCCeEecCcc-hHHHHHHHHHcCceeeec-cccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccc
Confidence            999999886654 344555566778877655 32         22345789999999998432  23578888998865 


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEccccccccc----C-CCCcc--c-------cCCCcEEEEeccccccCCCcceeEE
Q 015768          178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY----D-GRKHC--C-------VEGDHVVNLFSFSKAYGMMGWRVGY  243 (400)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~----~-~~~~~--~-------~~~~~~i~~~s~sK~~g~~g~~~G~  243 (400)
                      |.+++.+++++|.++|++||+.+++|+++.....    . .....  .       .....+++..|++|.++.+  ..|+
T Consensus       189 G~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~~--~GG~  266 (456)
T d1c7ga_         189 GQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVN--IGGF  266 (456)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS--SCEE
T ss_pred             cceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccccEEEecccccccc--ceeE
Confidence            6889999999999999999999999999863221    0 00000  0       0123457788999998643  2488


Q ss_pred             EEccCCcHHHHHHHHHhhc----c-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768          244 IAYPSEVEGFATQLLKVQD----N-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  318 (400)
Q Consensus       244 i~~~~~~~~~~~~l~~~~~----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  318 (400)
                      +++++  ++++++++....    . .....+.....++...+.+..+  .+..++..++.++|.+.|++.+. .+..|.+
T Consensus       267 i~~~~--~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~--~~~l~~r~~~~~~L~e~L~~~g~-~vv~p~g  341 (456)
T d1c7ga_         267 LCMND--EEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ--YEYIEHRVKQVRYLGDKLREAGV-PIVEPTG  341 (456)
T ss_dssp             EEESC--HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHTTC-CBCSSCC
T ss_pred             EEcCC--HHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhccC-CcccCCC
Confidence            88776  777777654321    1 1222344444444444443111  23334445666788888888876 4444555


Q ss_pred             ceEEEeeC----C---CCCCCHHHHHHHHHHhcCeEEeCCCcc-------------CCCCeEEEEecc--CCHHHHHHHH
Q 015768          319 AIYLWARL----P---EKHLDDFEVVRWLAHRHGVVVIPGGAC-------------GCRGHLRISFGG--LVEDDCKAAA  376 (400)
Q Consensus       319 ~~~~~~~~----~---~~~~~~~~~~~~l~~~~gi~v~~g~~~-------------~~~~~iRi~~~~--~~~~~~~~~~  376 (400)
                      +..++++.    +   .......++..++..+.||...+...+             .....+|++++.  .|.++++..+
T Consensus       342 ~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T~e~iD~Va  421 (456)
T d1c7ga_         342 GHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVA  421 (456)
T ss_dssp             SSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCCHHHHHHHH
T ss_pred             CcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEecCcccCCHHHHHHHH
Confidence            66665542    2   111235566667777889975432211             012469999874  5899999999


Q ss_pred             HHHHHHHHHH
Q 015768          377 DRLRRGLEEL  386 (400)
Q Consensus       377 ~~l~~~l~~~  386 (400)
                      ++|+++.+..
T Consensus       422 e~i~~v~~~~  431 (456)
T d1c7ga_         422 DGIIKLYQHK  431 (456)
T ss_dssp             HHHHHHHTTG
T ss_pred             HHHHHHHhhh
Confidence            9999887653

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=4.9e-20  Score=168.56  Aligned_cols=366  Identities=17%  Similarity=0.134  Sum_probs=257.6

Q ss_pred             HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHH
Q 015768            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKK   80 (400)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~   80 (400)
                      +++-+...+...+.-+.+....+...++|-.+++..  ++.|++++...+.+....+      |+...-.++++....++
T Consensus         8 ~~~~l~~~D~ei~~~i~~e~~rq~~~l~LIaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~r   85 (470)
T d1rv3a_           8 LAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFA--SRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKR   85 (470)
T ss_dssp             TTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCC--CHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred             HhhhHhhhCHHHHHHHHHHHHHHHcCceEecCCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHH
Confidence            334445566677777777777788999999888775  5999999988886643222      33334456677777788


Q ss_pred             HHhhcCCCCC--cEEE-eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----------HhcCcEEEEeccCCCCC
Q 015768           81 LNQENKLYKS--SVMV-TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----------QMTGVTHILVGPCSSKT  147 (400)
Q Consensus        81 l~~~~~~~~~--~i~~-~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----------~~~g~~~~~~~~~~~~~  147 (400)
                      ..+.++.+++  .+-+ ..+++.|+..++.++++|||+|+..+..+.++...-          .....+.+.+ +++++.
T Consensus        86 a~~lF~~~~~~~~anVqp~SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y-~v~~~~  164 (470)
T d1rv3a_          86 ALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY-KVNPDT  164 (470)
T ss_dssp             HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE-CBCTTT
T ss_pred             HHHHhCCChhhccccccccCCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEE-EEeccc
Confidence            8888888643  2222 366889999999999999999999887776654321          1122467788 888887


Q ss_pred             CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEE
Q 015768          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVN  226 (400)
Q Consensus       148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~  226 (400)
                      ..+|.+.+++...... |++|++....+|  ..+|   .+++.++|++.|.++++|.+|..+.. ++....+.. ..+++
T Consensus       165 ~~IDyd~l~~~a~~~k-PklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~-~aDvv  237 (470)
T d1rv3a_         165 GYIDYDRLEENARLFH-PKLIIAGTSCYS--RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCHVV  237 (470)
T ss_dssp             CSBCHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCSEE
T ss_pred             CcccHHHHHHHHHhhC-cceEeechhhcc--ccCC---HHHHHHHHhccCCeEEecchhhhhhccccccCChhh-eeeee
Confidence            7899999999887543 699987654444  5678   77888888899999999999975443 332222333 34799


Q ss_pred             EeccccccCCCcceeEEEEccCCc------------HHHHHHHHHhhccCCcC-ccHHHHHHHHHHhcC-CcHHHHHHHH
Q 015768          227 LFSFSKAYGMMGWRVGYIAYPSEV------------EGFATQLLKVQDNIPIC-ASIISQHLALYSLQT-GPEWVTERVK  292 (400)
Q Consensus       227 ~~s~sK~~g~~g~~~G~i~~~~~~------------~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~  292 (400)
                      ++|.+|.+  +|.|.|.|.++++.            .++.+++.........+ +......+.+.++.+ ....++.+.+
T Consensus       238 t~tTHKtl--rGPrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~  315 (470)
T d1rv3a_         238 TTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQR  315 (470)
T ss_dssp             EEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred             eeehhhhc--cCCcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHH
Confidence            99999998  68888999987521            14677777655433333 333333333334443 2345789999


Q ss_pred             HHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCcc-CCCCeEEEEec--
Q 015768          293 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGAC-GCRGHLRISFG--  365 (400)
Q Consensus       293 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~-~~~~~iRi~~~--  365 (400)
                      +..++++.|.+.|.+.+...+.+......+++++.....++.++.. ++++.||.+.    |+... ..+..|||+..  
T Consensus       316 qvv~NAk~La~~L~~~G~~v~~ggTdnHlvlvdl~~~g~~g~~ae~-~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~al  394 (470)
T d1rv3a_         316 QVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEK-VLEACSIACNKNTCPGDKSALRPSGLRLGTPAL  394 (470)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHH-HHHHTTEECEEECCSSCSCTTSCCEEEEECHHH
T ss_pred             HHHHHHHHHHHHHHhCCceeccCCCCCceEEEeecccCCcHHHHHH-HHHHcCcEECCCcCCCCCCCCCCCeeEecCHHH
Confidence            9999999999999998874455555577888888665557766555 4568999884    33311 13578999865  


Q ss_pred             --c-CCHHHHHHHHHHHHHHHHH
Q 015768          366 --G-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       366 --~-~~~~~~~~~~~~l~~~l~~  385 (400)
                        + +.++|+.+..+.|.+++..
T Consensus       395 TtrG~~e~dm~~iA~~I~~~l~~  417 (470)
T d1rv3a_         395 TSRGLLEKDFQKVAHFIHRGIEL  417 (470)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCHHHHHHHHHHHHHHHHH
Confidence              2 6789999999999888863

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.87  E-value=1e-20  Score=172.46  Aligned_cols=360  Identities=16%  Similarity=0.115  Sum_probs=239.7

Q ss_pred             hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhh
Q 015768           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQE   84 (400)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~   84 (400)
                      +...+.....-+.+..+.++..++|-.+++..  ++.|++++...+.+....+      |+...-.++++....++..+.
T Consensus         8 L~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~l   85 (463)
T d2a7va1           8 LSDSDPEMWELLQREKDRQCRGLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA   85 (463)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHhcCeeEeccCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHH
Confidence            33445566666677777778889999888775  5999999988886533222      334455678888888888888


Q ss_pred             cCCCCC----cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH--------HhcC--cEEEEeccCCCCCCCC
Q 015768           85 NKLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF--------QMTG--VTHILVGPCSSKTLHP  150 (400)
Q Consensus        85 ~~~~~~----~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~  150 (400)
                      ++++..    +|.. .+++.|+..++.+|++|||+|+..++.+.++...-        ...|  .+.+.+ ..+++...+
T Consensus        86 F~~~~a~w~vNVqp-~SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y-~~d~~~~~I  163 (463)
T d2a7va1          86 FDLDPAQWGVNVQP-YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI  163 (463)
T ss_dssp             TTCCTTTEEEECCC-SSHHHHHHHHHHHHCCSCEECCC-------------------------------C-CBCTTTCSB
T ss_pred             hCCCchhccCCccc-cccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeee-eccCCCCcC
Confidence            998865    3443 45679999999999999999998887776654221        1122  245556 667666689


Q ss_pred             CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEec
Q 015768          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFS  229 (400)
Q Consensus       151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s  229 (400)
                      |.+.++++..... ||+|++....+|  ..+|   .+++.++|++.|.++++|.+|..+.. ++....+.. ..+++++|
T Consensus       164 Dyd~~~~~a~~~k-PklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~-~aDvvt~t  236 (463)
T d2a7va1         164 DYNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HADIVTTT  236 (463)
T ss_dssp             CHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEE
T ss_pred             cHHHHHHHHhhcC-CceEEecccccc--cccC---HHHHHHHhhcccceEEechhhhhHHhhhhhhcChhh-hhhhhhch
Confidence            9999999887544 699987654444  5678   77888888899999999999975554 333222333 35799999


Q ss_pred             cccccCCCcceeEEEEccCCc------------HHHHHHHHHhhccCCcCcc-HHHHHHHHHHhcC-CcHHHHHHHHHHH
Q 015768          230 FSKAYGMMGWRVGYIAYPSEV------------EGFATQLLKVQDNIPICAS-IISQHLALYSLQT-GPEWVTERVKDLV  295 (400)
Q Consensus       230 ~sK~~g~~g~~~G~i~~~~~~------------~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~~~~~~~~~~~  295 (400)
                      .+|.+  +|.|.|.|.++++.            .++.+++...-.....+.+ .....+.+.++.+ ....++++.++..
T Consensus       237 THKTl--rGPrgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv  314 (463)
T d2a7va1         237 THKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL  314 (463)
T ss_dssp             SSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             hhhhh--cCCCceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHH
Confidence            99998  68899999987521            1566777765443333322 2233333334332 2345789999999


Q ss_pred             HHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----CCCCeEEEEecc----
Q 015768          296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----GCRGHLRISFGG----  366 (400)
Q Consensus       296 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRi~~~~----  366 (400)
                      ++++.|.+.|.+.+...+.+......+++++.....++......| ++.||.+.--..+     ..+..|||+...    
T Consensus       315 ~NAk~La~~L~~~G~~vv~ggTdnHlvlvdl~~~~~~G~~ae~~L-e~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~Ttr  393 (463)
T d2a7va1         315 KNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVL-ELVSITANKNTCPGDRSAITPGGLRLGAPALTSR  393 (463)
T ss_dssp             HHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHH-HHTTEECEEECCTTCCCSSSCSEEEEESHHHHHT
T ss_pred             HHHHHHHHHHHhCCCeeecCCCCCceeeeeccccCCCHHHHHHHH-HhccCccCCccCCCCCCCCCCCceEeCCHHHHhC
Confidence            999999999999987445566667788889876555777666655 6899998522211     135689998653    


Q ss_pred             -CCHHHHHHHHHHHHHHHH
Q 015768          367 -LVEDDCKAAADRLRRGLE  384 (400)
Q Consensus       367 -~~~~~~~~~~~~l~~~l~  384 (400)
                       +.++|+.+..+.|.+++.
T Consensus       394 G~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         394 QFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             TCCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHH
Confidence             577899999988888885

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.87  E-value=7.7e-21  Score=170.00  Aligned_cols=276  Identities=18%  Similarity=0.150  Sum_probs=196.4

Q ss_pred             HHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCCCCHH
Q 015768           78 VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDAD  153 (400)
Q Consensus        78 a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~e  153 (400)
                      ++.++.+.|  .+..+.+++|+.|+..++.+++++||+|++..+.|.+....    ++..|+++.++ +..      |.+
T Consensus         4 E~~la~Leg--~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~-d~~------d~~   74 (331)
T d1pffa_           4 EGKIAKLEH--AEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI-DMA------VPG   74 (331)
T ss_dssp             HHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT------STT
T ss_pred             HHHHHHHhC--CCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEe-ccc------chh
Confidence            334443434  46788999999999999999999999999999999876644    56789999888 332      677


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEcccccccccCCCCccccCCCcEEEEecccc
Q 015768          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSK  232 (400)
Q Consensus       154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~-~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK  232 (400)
                      .+++.+++++  ++|+++.|.||+..+.+   ++.+++++ +++|+++|+|+++.......    +...+.++++.|++|
T Consensus        75 ~~~~~i~~~t--~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~~~----pl~~GaDiVv~S~TK  145 (331)
T d1pffa_          75 NIEKHLKPNT--RIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----PLDLGVDIVVHSATK  145 (331)
T ss_dssp             HHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----GGGGTCSEEEEETTT
T ss_pred             hHhhhccccc--ceeeeeccccccccccc---chhhhhhhhcccCceEEeecccccccccc----ccccCCCEEEecchh
Confidence            8999998877  99999999999999999   77777764 57899999999988544322    344567799999999


Q ss_pred             ccCC-CcceeEEEEccCCcHHHHHHHHH--hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768          233 AYGM-MGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  309 (400)
Q Consensus       233 ~~g~-~g~~~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (400)
                      .++. ...-.|.++.+   ++...+...  .+......+++...+.+...+++    +..+++++.+++..+.+.|++++
T Consensus       146 y~~Gh~d~~~G~v~~~---~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T----l~~Rm~~~~~nA~~lA~~L~~hp  218 (331)
T d1pffa_         146 YINGHTDVVAGLVCSR---ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT----LDMRVKRAAENAQKVAEFLHEHK  218 (331)
T ss_dssp             TTSSSSSCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hcCCCCcccccccccc---ccchhhhhhhhhhhccCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhhhCC
Confidence            9953 34556777777   454444332  33334556788888887877765    78888999999999999999887


Q ss_pred             CC-cccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCccC--------------
Q 015768          310 EG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGACG--------------  355 (400)
Q Consensus       310 ~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~~--------------  355 (400)
                      .+ ++..|                ..+..+.+.+..    .++. .++.+.-.+   .+.-|....              
T Consensus       219 ~V~~V~yPgl~s~p~~~~~~~~~~~~g~l~sf~l~~----~~~~-~~f~d~l~lf~~~~SlG~~~SLi~~p~~~~h~~~~  293 (331)
T d1pffa_         219 AVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG----LEKA-KKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVP  293 (331)
T ss_dssp             TCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS----HHHH-HHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSC
T ss_pred             cEEeeccccccCccHHHHHhhcccccCcccceeecc----HHHH-HHHHHhCCcceecccCCCCceeEeCccccccccCC
Confidence            74 23222                123445556642    2332 334444333   222232210              


Q ss_pred             ---------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 ---------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 ---------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                               .++.+|+|++.   |+.+++++.|.+|++.+
T Consensus       294 ~e~~~~~Gi~~~liRlsvGl---E~~~DLi~Dl~~AL~~i  330 (331)
T d1pffa_         294 KEEREAAGLTDNLIRLSVGC---ENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             HHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHTC
T ss_pred             HHHHHhcCCCcCeEEEEeee---CCHHHHHHHHHHHHHHh
Confidence                     14679999997   66667888888888754

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=1.7e-20  Score=170.96  Aligned_cols=285  Identities=19%  Similarity=0.173  Sum_probs=203.9

Q ss_pred             CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCC
Q 015768           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCS  144 (400)
Q Consensus        69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~  144 (400)
                      .-....+.+++.++++.|  .+..+++++|+.|+..+ ..++++||+|++....|.+....++    ..|.++.++ +  
T Consensus        52 ~gnPT~~~lE~~la~LE~--~~~a~~~sSGmaAi~~~-l~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~-~--  125 (393)
T d1n8pa_          52 SQNPNRENLERAVAALEN--AQYGLAFSSGSATTATI-LQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFT-N--  125 (393)
T ss_dssp             TCCHHHHHHHHHHHHHTT--CSEEEEESCHHHHHHHH-HHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEE-S--
T ss_pred             CCChHHHHHHHHHHHHhC--CceEEEecCchhHHHhh-hhcccCCCeeeeeeeecccchhhhhhhhhcccceeEEe-e--
Confidence            345677788888887776  46678888888998755 4667889999999999988776653    457776666 2  


Q ss_pred             CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH----HcCCEEEEcccccccccCCCCccccC
Q 015768          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK----AAGSWLVVDNTYEYFMYDGRKHCCVE  220 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~----~~~~~li~D~a~~~~~~~~~~~~~~~  220 (400)
                           .+.+++++.+++++  ++|+++.|.||+..+.|   +++|+++++    ++|+++++|+++......    .+..
T Consensus       126 -----~~~~~~~~~i~~~t--~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP~~~----~Pl~  191 (393)
T d1n8pa_         126 -----DLLNDLPQLIKENT--KLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS----NPLN  191 (393)
T ss_dssp             -----SHHHHHHHHSCSSE--EEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC----CGGG
T ss_pred             -----cchHHHHHHhhhhc--ceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCcccC----Cchh
Confidence                 24578999898877  99999999999999999   888888887    678999999998744332    2345


Q ss_pred             CCcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          221 GDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       221 ~~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      .+.++++.|++|.++. ..+-.|.++.++  +++.+++...+......+++...+.+...++.    +.-+++++.+++.
T Consensus       192 ~GADiVvhS~TKyi~GhsDv~~G~v~~~~--~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T----l~lR~~~~~~nA~  265 (393)
T d1n8pa_         192 FGADIVVHSATKYINGHSDVVLGVLATNN--KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----LHLRVRQAALSAN  265 (393)
T ss_dssp             GTCSEEEEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHH
T ss_pred             hCCCEEEEccccccCCCCccccceeeecc--hhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc----hhhHHHHHHHHHH
Confidence            5678999999999953 446678877664  67788888777666777888888888888887    6788899999999


Q ss_pred             HHHHHhccC-CCC-cccCC------------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE---eCCCccC-
Q 015768          300 IIREALSPL-GEG-AVKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGACG-  355 (400)
Q Consensus       300 ~l~~~L~~~-~~~-~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v---~~g~~~~-  355 (400)
                      .+.+.|+.. +.+ .+..|                  .+|..+.+.+...   .+. +.++++.-.++-   .-|.... 
T Consensus       266 ~lA~~L~~~~~~V~~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~~---~~~-~~~f~~~l~l~~~~~SlGg~~SL  341 (393)
T d1n8pa_         266 KIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG---AEA-ASKFASSTRLFTLAESLGGIESL  341 (393)
T ss_dssp             HHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC---HHH-HHHHHHHCSSSEECSCCCCSSCE
T ss_pred             HHHHHHHhccCcEEEEecccccccccchhhhhccccCCCCceEEEEEeCC---HHH-HHHHHHhCCcceecccCCCcCce
Confidence            999999765 321 11111                  1244566666532   222 222333333221   2222110 


Q ss_pred             ----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768          356 ----------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       356 ----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~  386 (400)
                                            .++.+|||++.   |+.+++++.|.+||++-
T Consensus       342 i~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGl---E~~~DLi~Dl~~AL~~a  391 (393)
T d1n8pa_         342 LEVPAVMTHGGIPKEAREASGVFDDLVRISVGI---EDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             EECTTTTTSCSSCTTTTTTTSCCTTEEEEECCS---SCHHHHHHHHHHHHHHH
T ss_pred             EeCchhhccccCCHHHHHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHHHh
Confidence                                  13579999997   67777888888888763

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.2e-20  Score=178.53  Aligned_cols=311  Identities=15%  Similarity=0.067  Sum_probs=204.1

Q ss_pred             HHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHH-HHHHHh---cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-C
Q 015768           71 PELRDALVKKLNQENKLYK-SSVMVTAGANQAFV-NIVLTL---CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-S  144 (400)
Q Consensus        71 ~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~-~~~~~l---~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~  144 (400)
                      ..++..+.+++.+.+|.+. ...++++|+|++.. .++.++   ..+++.|+++...|+++..+++.+|++++.+++. +
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~~  172 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLE  172 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEE
T ss_pred             HHHHHHHHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeecc
Confidence            4577788888888888763 56677777775444 444444   3466899999999999999999999998888322 2


Q ss_pred             CCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc---ccc
Q 015768          145 SKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCV  219 (400)
Q Consensus       145 ~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~  219 (400)
                      ++.+.+|+++|++.+.+  ...+.+|++++|+|++|.+.|   +++|.++|++||+++++|++++.+.....+.   ...
T Consensus       173 ~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~  249 (445)
T d3bc8a1         173 GDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGAR  249 (445)
T ss_dssp             TTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHH
T ss_pred             CcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehh---HHHHHHHHHHhCCcEEEEccchhhhhhccccchhccC
Confidence            34468899999999863  222478888899999999999   9999999999999999999998543211111   111


Q ss_pred             CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768          220 EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  299 (400)
Q Consensus       220 ~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (400)
                      ..+.+++..|.+|+++ .+...|+++.++  +...+.+...........+....++....+.  .+......+....+.+
T Consensus       250 ~~~vd~~~~s~hK~~~-~p~g~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~  324 (445)
T d3bc8a1         250 VGRIDAFVQSLDKNFM-VPVGGAIIAGFN--EPFIQDISKMYPGRASASPSLDVLITLLSLG--CSGYRKLLKERKEMFV  324 (445)
T ss_dssp             HSCCCEEEEEHHHHHS-CCSSCEEEEESC--HHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred             cCCcceEEecCccccc-cCCCCceeeeCC--hHHHHHHHHHHhhcccCcchHHHHHHHHHHh--hhcchhhHHHHHHHHH
Confidence            2346688899999886 344567777775  6777777655443333444445554444443  2334555555566666


Q ss_pred             HHHHHhccC----CCCcccCCCCceEEEeeCCC--C--CCCHHHHHHHHHHhcCeEEe----CCCc----------cC--
Q 015768          300 IIREALSPL----GEGAVKGGEGAIYLWARLPE--K--HLDDFEVVRWLAHRHGVVVI----PGGA----------CG--  355 (400)
Q Consensus       300 ~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~l~~~~gi~v~----~g~~----------~~--  355 (400)
                      ++.+.|+++    +......+......++.+..  .  ..+..++...|. +.||...    ++..          |+  
T Consensus       325 ~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~-~~gI~~~~~~~~~~~~~i~~~~~~~~g~~  403 (445)
T d3bc8a1         325 YLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLF-TRQVSGARAVPLGNVQTVSGHTFRGFMSH  403 (445)
T ss_dssp             HHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHH-HTTCCSCEEECSCCEEEETTEEEETTTTT
T ss_pred             HHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHHHHH-HcCCCcceeeccccccchhhhhhhhcCCC
Confidence            666655542    33222222223333333321  1  123445666554 6776321    1110          01  


Q ss_pred             ----CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccC
Q 015768          356 ----CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG  390 (400)
Q Consensus       356 ----~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~  390 (400)
                          ...++|++++. +|++|++.+++.|+++++++.+.+
T Consensus       404 ~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~~rk~~  443 (445)
T d3bc8a1         404 ADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQ  443 (445)
T ss_dssp             SSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence                13569999887 899999999999999999987754

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.85  E-value=7.5e-19  Score=161.76  Aligned_cols=314  Identities=12%  Similarity=0.077  Sum_probs=220.4

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc-CCC--CEEEEeCC
Q 015768           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-DAG--DSVVMFAP  121 (400)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~-~~g--d~vlv~~p  121 (400)
                      ..+-++++.+.++++.   |...+-...+++.+++++    |.  +.+++++++|.|+..++.++. ++|  |+|+++..
T Consensus        11 ~~~~~~~v~~~l~~~~---~~~G~~v~~fE~~~~~~~----g~--k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~   81 (371)
T d2fnua1          11 DKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFL----GV--KHALVFNSATSALLTLYRNFSEFSADRNEIITTPI   81 (371)
T ss_dssp             CHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSS
T ss_pred             CHHHHHHHHHHHcCCC---ccCCHHHHHHHHHHHHHH----Cc--CeEEEEecHHHHHHHHHHHhcccCCCCCeeecccc
Confidence            4677888999887653   333334666777777776    54  578999999999999999984 344  58999999


Q ss_pred             CccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768          122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV  201 (400)
Q Consensus       122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li  201 (400)
                      +|.+...++...|++++++ +++++++ .+.+++++.+.+++  ++|+++   +..|...+   +.+|.++|+++++++|
T Consensus        82 t~~a~~~ai~~~G~~pv~v-Di~~~~~-~~~~~~~~~~~~~t--~avi~v---h~~G~~~~---~~~i~~~~~~~~i~lI  151 (371)
T d2fnua1          82 SFVATANMLLESGYTPVFA-GIKNDGN-IDELALEKLINERT--KAIVSV---DYAGKSVE---VESVQKLCKKHSLSFL  151 (371)
T ss_dssp             SCTHHHHHHHHTTCEEEEC-CBCTTSS-BCGGGSGGGCCTTE--EEEEEE---CGGGCCCC---HHHHHHHHHHHTCEEE
T ss_pred             cccccceeeeccCcccccc-ccccccc-ccchhhhhhccchh--hccccc---cccccccc---cccccccccccchhhc
Confidence            9999999999999999999 8888775 45677888877766  888866   46788889   8888999999999999


Q ss_pred             EcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----------------CC
Q 015768          202 VDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----------------IP  265 (400)
Q Consensus       202 ~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~----------------~~  265 (400)
                      +|.+++.+..-........++..++.+..+|.++. | ..|.+++++  +++.+++...+..                ..
T Consensus       152 EDaaqa~Ga~~~~~~~G~~g~~~~~Sf~~~K~l~~-g-~GG~i~t~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n  227 (371)
T d2fnua1         152 SDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-A-EGGAVVTND--SELHEKMKLFRSHGMLKKDFFEGEVKSIGHN  227 (371)
T ss_dssp             EECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC-S-SCEEEEESC--HHHHHHHHHHTBTTEEESSSSCEEESSCCCB
T ss_pred             cchhhccCceeccccCCcccccccccccccccccc-c-cceEEEeec--hhhhhhccccccccccccccccccccccccc
Confidence            99999976643333334445555555555898853 2 368888887  7888888876531                23


Q ss_pred             cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----C-CceEEEeeCCCC-CCCHHHHHHH
Q 015768          266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----E-GAIYLWARLPEK-HLDDFEVVRW  339 (400)
Q Consensus       266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~-~~~~~~~~~~~~-~~~~~~~~~~  339 (400)
                      +.++.+....+...|+.    +++..++-+++...+.+.|++.+.+....+    . ......+.+... ....+++.+.
T Consensus       228 ~r~sel~Aaigl~qL~~----l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~  303 (371)
T d2fnua1         228 FRLNEIQSALGLSQLKK----APFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILES  303 (371)
T ss_dssp             CCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHH
T ss_pred             ccccchhhhhhhhhhhh----ccchhhhhhhhhhhhcccccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence            34566666666666665    456666666777788888888765333221    1 112222333321 1134567777


Q ss_pred             HHHhcCeEEeCCCcc-----------CC----------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          340 LAHRHGVVVIPGGAC-----------GC----------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       340 l~~~~gi~v~~g~~~-----------~~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                      | +++||.+.+...+           ..          ...+.+-++. ++.+|++..++.|.++++++
T Consensus       304 L-~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~~  371 (371)
T d2fnua1         304 L-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF  371 (371)
T ss_dssp             H-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             H-HHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHHHHHcC
Confidence            7 4899998765321           00          1356665554 89999999999999998864

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.85  E-value=2.7e-20  Score=175.50  Aligned_cols=338  Identities=11%  Similarity=0.038  Sum_probs=212.7

Q ss_pred             hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (400)
Q Consensus        27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~  100 (400)
                      .+|+.++||..|.  ..++ .+|+|.+++.+.+....   ...+ .......+.+.+++.+.+......+.+++++++++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~~a~~lae~l~~~~~~~~~~v~f~~sGse  128 (461)
T d1ohwa_          50 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPAL-GILPPENFVEKLRESLLSVAPKGMSQLITMACGSC  128 (461)
T ss_dssp             TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCT-TTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             CCCCEEEEcccCHHHHhhcCCcHHHHHHHHHHHhhhhhcccccc-cccchHHHHHHHHHHHHhhhccCcceeeeecchhh
Confidence            4678899997764  4454 68899999988775421   1111 12223456677888776665545678999999999


Q ss_pred             HHHHHHHHhc----------------------------CCCCEEEEeCCCccchhHHHHh-cCcE-----------EEEe
Q 015768          101 AFVNIVLTLC----------------------------DAGDSVVMFAPYYFNSYMSFQM-TGVT-----------HILV  140 (400)
Q Consensus       101 a~~~~~~~l~----------------------------~~gd~vlv~~p~~~~~~~~~~~-~g~~-----------~~~~  140 (400)
                      |++.+++...                            .+...|+....+|++....... .|-.           ....
T Consensus       129 Ave~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~  208 (461)
T d1ohwa_         129 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  208 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEE
T ss_pred             hhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCccc
Confidence            9999988652                            2235799999999886543322 2210           0001


Q ss_pred             ccCCCCCC-------------CCCHHHHHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEE
Q 015768          141 GPCSSKTL-------------HPDADWLEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVV  202 (400)
Q Consensus       141 ~~~~~~~~-------------~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~  202 (400)
                       |.....+             ..+.+.+++.+.    ....+.+|+++..+...|. .+|.+.+++|.++|++||+++|+
T Consensus       209 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~  287 (461)
T d1ohwa_         209 -PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV  287 (461)
T ss_dssp             -CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             -ccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceec
Confidence             1111000             012345555443    2333677888866666665 57899999999999999999999


Q ss_pred             cccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHH
Q 015768          203 DNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALY  278 (400)
Q Consensus       203 D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (400)
                      ||++.++...|......    ....+++  +++|.++ .    |++...   ..+ ..........+++.++++..++.+
T Consensus       288 DEV~tG~gRtG~~~~~e~~gi~~~PDiv--~~gK~l~-~----g~~~~~---~~~-~~~~~~~~~~T~~g~p~~~aaa~a  356 (461)
T d1ohwa_         288 DEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMM-T----GGFFHK---EEF-RPNAPYRIFNTWLGDPSKNLLLAE  356 (461)
T ss_dssp             ECTTTCSSTTSSSSGGGGGCCSSCCSEE--EECGGGS-S----EEEEEC---GGG-SCSSTTSSCCSCSSCHHHHHHHHH
T ss_pred             cccccccccccccccccccccccCchhh--hhhhccc-c----cccccc---ccc-ccccccccccccccccccchhhcc
Confidence            99999886555432222    1123344  6679885 3    333333   111 111223345678889999998888


Q ss_pred             HhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCc
Q 015768          279 SLQTGPEWVTERVKDLVRNREIIREALSP----LGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA  353 (400)
Q Consensus       279 ~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~  353 (400)
                      .|+...+  ++..++..+..+++.+.|++    .+. +.-+... |+++-+.++... ...++...++ ++|+++.+.  
T Consensus       357 ~l~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~-Gl~~~ie~~~~~-~~~~i~~~~~-~~Gll~~~~--  429 (461)
T d1ohwa_         357 VINIIKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDES-IRNKLISIAR-NKGVMLGGC--  429 (461)
T ss_dssp             HHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSHH-HHHHHHHHHH-HTTEECEEE--
T ss_pred             cchhhhh--hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeee-eEEEEEEcCCHH-HHHHHHHHHH-HCCeEEeeC--
Confidence            8875221  23344455555555555544    332 2223344 566677776432 3456777775 789998763  


Q ss_pred             cCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768          354 CGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  386 (400)
Q Consensus       354 ~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~  386 (400)
                        .++.|||.+.. +|+++++.++++|.+++.++
T Consensus       430 --~~~~ir~~PpL~it~~eid~~~~~l~~~l~ef  461 (461)
T d1ohwa_         430 --GDKSIRFRPTLVFRDHHAHLFLNIFSDILADF  461 (461)
T ss_dssp             --TTTEEECCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             --CCCEEEEeCCcCCCHHHHHHHHHHHHHHHhcC
Confidence              35789999876 89999999999999999864

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.84  E-value=4e-19  Score=163.93  Aligned_cols=309  Identities=13%  Similarity=0.070  Sum_probs=204.9

Q ss_pred             HHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccchh
Q 015768           49 MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSY  127 (400)
Q Consensus        49 ~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~  127 (400)
                      ++++.+.++++.....|  +....+++.+++++    |  ....++++++|.|+..++.++ .++||+|+++..+|.+..
T Consensus         4 ~~~~~~~l~~~~~~~~G--~~~~~fE~~~~~~~----~--~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~   75 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPLG--EFVNRFEQSVKDYS----K--SENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASV   75 (374)
T ss_dssp             HHHHHHHHHHTTTSCTT--HHHHHHHHHHHHHH----C--CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGT
T ss_pred             HHHHHHHHhcCCcCCCC--HHHHHHHHHHHHHH----C--cCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhH
Confidence            46677777765433232  33677888888877    5  357899999999999999998 689999999999999999


Q ss_pred             HHHHhcCcEEEEeccCCCCCCCCCHHHHH--HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 015768          128 MSFQMTGVTHILVGPCSSKTLHPDADWLE--KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT  205 (400)
Q Consensus       128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~--~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a  205 (400)
                      .++...|+.++++ +++++....+.+..+  .....++  ++|+++   +..|...+   +.++.++|+++|++||+|.+
T Consensus        76 ~~~~~~g~~pv~~-Di~~~~~~~~~~~~~~~~~~~~~~--~aii~~---~~~G~~~d---~~~i~~~~~~~~i~vIED~a  146 (374)
T d1o69a_          76 APICYLKAKPVFI-DCDETYNIDVDLLKLAIKECEKKP--KALILT---HLYGNAAK---MDEIVEICKENDIVLIEDAA  146 (374)
T ss_dssp             HHHHHTTCEEEEE-CBCTTSSBCHHHHHHHHHHCSSCC--CEEEEE---CGGGCCCC---HHHHHHHHHHTTCEEEEECT
T ss_pred             HHHhhccceeEec-ccccccccccccccccchhccccc--cccccc---ccccchhh---hHHHHHHhhccCcchhhhhh
Confidence            9999999999999 787665444444333  3333444  888865   45788888   88999999999999999999


Q ss_pred             ccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--------------CCcCccHH
Q 015768          206 YEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------------IPICASII  271 (400)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~  271 (400)
                      ++.+..-........++..++.+..+|.++.+  ..|.+++.+  +++++++...+..              ..+.++.+
T Consensus       147 ~a~g~~~~~~~~G~~gd~~~fSf~~~K~l~tg--eGG~i~tnn--~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei  222 (374)
T d1o69a_         147 EALGSFYKNKALGTFGEFGVYSYNGNKIITTS--GGGMLIGKN--KEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNV  222 (374)
T ss_dssp             TCTTCEETTEETTSSSSEEEEECCTTSSSCCS--SCEEEEESC--HHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHH
T ss_pred             hhhcceECCeecCCCCceEEEeccCccccccc--cceeehhhh--HHHHHhhccccccccccccccccccCCccccccch
Confidence            99655322222222344444444446888533  358888877  7888888765431              23446777


Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-----CCCceEEEeeCCC------------------
Q 015768          272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEGAIYLWARLPE------------------  328 (400)
Q Consensus       272 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~~~~~~~~~~~~~------------------  328 (400)
                      ....+...|..    +++..++-+++++.+.+.|.+........     +..-.+..+....                  
T Consensus       223 ~Aaig~~qL~~----l~~~i~~r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (374)
T d1o69a_         223 LGAIGVAQMEV----LEQRVLKKREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNIT  298 (374)
T ss_dssp             HHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCC
T ss_pred             hhhhhHHHHhh----hhhhcchhHHHHHHHHhhccccccccccccCCCCChhheeeeeccccccccccccccccchhhcc
Confidence            77777767765    45555555666777778887643211110     1111222222111                  


Q ss_pred             CCCCHHHHHHHHHHhcCeEEeCCCccC-------------C-------CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          329 KHLDDFEVVRWLAHRHGVVVIPGGACG-------------C-------RGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~-------------~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      ......++..+| +++||.+++....-             .       ...+.+-++. +|.+|++..++.|.+++
T Consensus       299 ~~~~r~~l~~~L-~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~l  373 (374)
T d1o69a_         299 LHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSI  373 (374)
T ss_dssp             CCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHH-HHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHHHHHHHHHHHH
Confidence            001245677776 58999887653210             0       1246665554 89999999999999886

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.83  E-value=7.5e-19  Score=166.78  Aligned_cols=313  Identities=13%  Similarity=0.053  Sum_probs=196.1

Q ss_pred             CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCE-------EEEeCCCccchhHHHHhcCc
Q 015768           63 KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDS-------VVMFAPYYFNSYMSFQMTGV  135 (400)
Q Consensus        63 ~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~-------vlv~~p~~~~~~~~~~~~g~  135 (400)
                      .|+...+..++++.+++++    |  .+.++++++|++|+..++.+++++|++       ++.....+..+.......|.
T Consensus        70 ~y~~~~~~~~le~~~a~l~----g--~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~g~  143 (465)
T d1ax4a_          70 AYAGSRNYYDLKDKAKELF----N--YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGC  143 (465)
T ss_dssp             CSSSCHHHHHHHHHHHHHH----C--CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTC
T ss_pred             hhccChHHHHHHHHHHHHH----C--CCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHcCC
Confidence            4766777778888888876    5  478999999999999999999765443       44444444444455677788


Q ss_pred             EEEEecc---------CCCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768          136 THILVGP---------CSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVD  203 (400)
Q Consensus       136 ~~~~~~~---------~~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~D  203 (400)
                      .++.+ +         .++..+.+|++.+++++++..  .+.+++++.++|.. |.++|.+++++|.++|++||+++|+|
T Consensus       144 ~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D  222 (465)
T d1ax4a_         144 KAINI-VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMD  222 (465)
T ss_dssp             EEEEC-BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred             eeecc-cccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEE
Confidence            77654 2         233446789999999997321  13556666666655 46789999999999999999999999


Q ss_pred             ccccccccC----------CCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh----h-ccC
Q 015768          204 NTYEYFMYD----------GRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----Q-DNI  264 (400)
Q Consensus       204 ~a~~~~~~~----------~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~----~-~~~  264 (400)
                      +++......          +.....    ...-.+++..|.+|..+  +.+.|+++.+++ ..........    . ...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~--~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~  299 (465)
T d1ax4a_         223 SARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPL--LNIGGLVAIRDN-EEIFTLARQRCVPMEGFVT  299 (465)
T ss_dssp             CTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTC--CSSCEEEEESSC-HHHHHHHHHHHHHHTCSTT
T ss_pred             CcchhhhhcccccccccccccchhhhccccccccceeEeecccCcc--cccceeEeecch-HHHHHhhhccccccccCCC
Confidence            998743211          000000    00113466667777664  556788887753 2333322211    1 112


Q ss_pred             CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC-------CCCHHHHH
Q 015768          265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK-------HLDDFEVV  337 (400)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  337 (400)
                      ..+.......++...+....  .+...++..++.+++.+.|++.+. .+..+.++..+.+.....       ........
T Consensus       300 ~~~~~~~~~~a~~~~~~e~~--~~~~~~~~~~~~~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (465)
T d1ax4a_         300 YGGLAGRDMAAMVQGLEEGT--EEEYLHYRIGQVKYLGDRLREAGI-PIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVI  376 (465)
T ss_dssp             TTTCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTTC-CBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHH
T ss_pred             cchhhHHHHHHHhhhhHHhh--hHHHHHHHHHHHHHHHHHHHhhcC-ccccCCCcceeeeehhhhcCCCccccchhHHHH
Confidence            22334444444444443211  134445556677888999988776 445555566655543321       11234455


Q ss_pred             HHHHHhcCeEEeCCCcc-------------CCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHhc
Q 015768          338 RWLAHRHGVVVIPGGAC-------------GCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVK  388 (400)
Q Consensus       338 ~~l~~~~gi~v~~g~~~-------------~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~~  388 (400)
                      .+++.+.||........             ...+.+|+++..  .|+|+++..+++|++++++..+
T Consensus       377 ~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~~~~  442 (465)
T d1ax4a_         377 NALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFAT  442 (465)
T ss_dssp             HHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHTT
T ss_pred             HHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            66667889876432211             124579998653  5899999999999999887653

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.81  E-value=5.1e-18  Score=160.85  Aligned_cols=297  Identities=11%  Similarity=0.022  Sum_probs=173.7

Q ss_pred             HHHHHHhhcCCCCCcEEEe-CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhc-CcEEEEe-ccCCCCCC-----
Q 015768           77 LVKKLNQENKLYKSSVMVT-AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT-GVTHILV-GPCSSKTL-----  148 (400)
Q Consensus        77 ~a~~l~~~~~~~~~~i~~~-~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~-g~~~~~~-~~~~~~~~-----  148 (400)
                      +.+.+++.+|.  ++.+|+ +|+|.++..++.++++|||+|+++..+|.++.+....+ +..+++. .+.++.|.     
T Consensus        71 ae~~~A~~~ga--~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~~~~g~~~~~~  148 (462)
T d1c4ka2          71 AEKHAARVYNA--DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIY  148 (462)
T ss_dssp             HHHHHHHHTTC--SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEEC
T ss_pred             HHHHHHHHhCC--CeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeecccccccccCCCC
Confidence            34444444474  556665 55566777778889999999999999999988766544 3333332 03444432     


Q ss_pred             --CCCHHHHH---------HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-
Q 015768          149 --HPDADWLE---------KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-  216 (400)
Q Consensus       149 --~~~~e~l~---------~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-  216 (400)
                        .++.+.++         +....++  +++++.+.+|..|.+.|   +++|+++|+++|+++++|++++......... 
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~~~~~~G~~~d---l~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~~  223 (462)
T d1c4ka2         149 DSDFDEKKIRELAAKVDPERAKWKRP--FRLAVIQLGTYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMR  223 (462)
T ss_dssp             GGGSCHHHHHHHTTTSSHHHHTCSCC--BSEEEEESBCTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGG
T ss_pred             hHHhhHHHHHhhhhhhcHHhhhccCC--ceeEEEEeeeeccchhh---HHHHHHHHHHcCCEEEEechhhccccccCcCC
Confidence              12222222         2223333  44555555677899999   9999999999999999999998554322111 


Q ss_pred             -c--------ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH--------HHHHHHhh-ccCCcCccHHHHHHHHH
Q 015768          217 -C--------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--------ATQLLKVQ-DNIPICASIISQHLALY  278 (400)
Q Consensus       217 -~--------~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~--------~~~l~~~~-~~~~~~~~~~~~~~~~~  278 (400)
                       .        ....+.++++.|+||.+|.++ ..+++..++  ..+        .+.+.... ...+.+++......+..
T Consensus       224 ~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~-~g~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~t~sp~~~~~asl~~  300 (462)
T d1c4ka2         224 NSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS-QTSQIHKKD--SHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDV  300 (462)
T ss_dssp             GGCTTSCCCCCTTSCEEEEEECHHHHSSCCT-TCEEEEEEC--GGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHH
T ss_pred             cchhhccccccccCCccEEEEecCccccccc-ceEEEEecc--ccccccchhhhHHHHHHhhhhcccCCchHHHHHHHHH
Confidence             0        112345899999999997433 234444442  111        11222211 11244445444444433


Q ss_pred             HhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC----------------------------C----------CCc
Q 015768          279 SLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG----------------------------G----------EGA  319 (400)
Q Consensus       279 ~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----------------------------~----------~~~  319 (400)
                      +... ..+...+..++..++.+++++.+.+++......                            +          ...
T Consensus       301 a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (462)
T d1c4ka2         301 NAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDN  380 (462)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTT
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccccccCcc
Confidence            3332 123345566667777777777776654311000                            0          000


Q ss_pred             eE------EEeeCCC----------CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768          320 IY------LWARLPE----------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  382 (400)
Q Consensus       320 ~~------~~~~~~~----------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  382 (400)
                      .+      +.+..+.          ....+..+.+.| +++||.+..    ...+.+|++++. +|++|++.+++.|.+.
T Consensus       381 ~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L-~~~gI~~e~----~~~~~i~~~~s~~~T~edid~li~aL~ei  455 (462)
T d1c4ka2         381 QYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEK----SDLNSILFLMTPAETPAKMNNLITQLLQL  455 (462)
T ss_dssp             CEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSE----ECSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ceecccceeEEecCCccccccchhhcCCcHHHHHHHH-HHcCCeeec----cCCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            00      2222211          123466777766 589987642    146789999988 8999999999999998


Q ss_pred             HHHHhc
Q 015768          383 LEELVK  388 (400)
Q Consensus       383 l~~~~~  388 (400)
                      .+.+.+
T Consensus       456 ~r~~~~  461 (462)
T d1c4ka2         456 QRLIEE  461 (462)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            877654

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=7e-18  Score=160.04  Aligned_cols=311  Identities=13%  Similarity=0.037  Sum_probs=191.0

Q ss_pred             CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCE---------EEEeCCCccchhHHHHhc
Q 015768           63 KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDS---------VVMFAPYYFNSYMSFQMT  133 (400)
Q Consensus        63 ~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~---------vlv~~p~~~~~~~~~~~~  133 (400)
                      .|+..++..++++.+++++    |  .+.++++++||+|+..++.+++++|+.         +......|......+...
T Consensus        69 ~Y~~~~~~~~le~~~a~l~----G--~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  142 (467)
T d2v1pa1          69 AFSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQIN  142 (467)
T ss_dssp             CSSSCHHHHHHHHHHHHHT----C--CSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHT
T ss_pred             hhcCCchHHHHHHHHHHHH----C--CCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHHHc
Confidence            4665555666666666655    5  467899999999999999999866554         333444444455667788


Q ss_pred             CcEEEEeccCCCC---------CCCCCHHHHHHhhccC--CCCeEEEEeCCCCC-CccCCCHHHHHHHHHHHHHcCCEEE
Q 015768          134 GVTHILVGPCSSK---------TLHPDADWLEKTLETK--PTPKLVSVVNPGNP-SGTYIPERLLKRISDLCKAAGSWLV  201 (400)
Q Consensus       134 g~~~~~~~~~~~~---------~~~~~~e~l~~~l~~~--~~~~~v~l~~p~np-tG~~~~~~~l~~i~~l~~~~~~~li  201 (400)
                      |+.++.+ +.+..         ...+|++.+++.++..  ...+++++++.+|. .|.+++.+++++|.++|++||+++|
T Consensus       143 G~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l~  221 (467)
T d2v1pa1         143 GCTVRNV-YIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVV  221 (467)
T ss_dssp             TCEEEEC-BCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEE
T ss_pred             CCeeeec-ccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEEE
Confidence            9988877 54422         2467999999998732  22467777777664 4678899999999999999999999


Q ss_pred             Eccccccccc----------CCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH---h----
Q 015768          202 VDNTYEYFMY----------DGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK---V----  260 (400)
Q Consensus       202 ~D~a~~~~~~----------~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~---~----  260 (400)
                      +|+++.....          .+....    ......+++..|.+|.++  +...|+++.++  +.+......   .    
T Consensus       222 ~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~--~~~gg~i~~~~--~~~~~~~~~~~~~~~~~  297 (467)
T d2v1pa1         222 MDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAM--VPMGGLLCMKD--DSFFDVYTECRTLCVVQ  297 (467)
T ss_dssp             EECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTC--CSSCEEEEECS--GGGHHHHHHHHHHHHHT
T ss_pred             EechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCC--CCCceeEEecc--hhhhhHHHhhccccccc
Confidence            9999864321          111100    011235577788899875  34457777765  333222221   1    


Q ss_pred             hcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC-ceEEEe--eCCCC---CCCH
Q 015768          261 QDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG-AIYLWA--RLPEK---HLDD  333 (400)
Q Consensus       261 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~--~~~~~---~~~~  333 (400)
                      ... ...+.+.....++...+....  ..+..++..++.+++.+.|++.+. .+.++.. ..++..  .++..   ....
T Consensus       298 ~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (467)
T d2v1pa1         298 EGFPTYGGLEGGAMERLAVGLYDGM--NLDWLAYRIAQVQYLVDGLEEIGV-VCQQAGGHAAFVDAGKLLPHIPADQFPA  374 (467)
T ss_dssp             TSSCCCCCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTTC-CEEEECSSCEEEEHHHHSTTSCGGGCHH
T ss_pred             ccCcchhhhHHHHHHHHHHHhHHhh--hHHHHHHHHHHHHHHHHHHHhcCC-cccCCCccceeecchhhcCCcchhhhhh
Confidence            111 112233334444443343211  134555566778888888888765 3332221 222211  11211   1124


Q ss_pred             HHHHHHHHHhcCeEEeCCCcc-------------CCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHh
Q 015768          334 FEVVRWLAHRHGVVVIPGGAC-------------GCRGHLRISFGG--LVEDDCKAAADRLRRGLEELV  387 (400)
Q Consensus       334 ~~~~~~l~~~~gi~v~~g~~~-------------~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~  387 (400)
                      ..+...++.+.||.......+             .....+|+++..  .|+|+++..++.|++++++..
T Consensus       375 ~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~~~  443 (467)
T d2v1pa1         375 QALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA  443 (467)
T ss_dssp             HHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            455666777889865322111             124679999764  699999999999999987543

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.77  E-value=1e-17  Score=153.65  Aligned_cols=330  Identities=12%  Similarity=0.040  Sum_probs=194.7

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhcCCCCC--C---CC-CCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChH-HHHHH
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSIS--K---YG-ADEGLPELRDALVKKLNQENKLYKS-SVMVTAGAN-QAFVN  104 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~---y~-~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t-~a~~~  104 (400)
                      .+|+.|  +...|++|+++|.+.+.+....  +   .+ .+....++.+.+.+.+++.++.+.+ .+++++|++ .++..
T Consensus         5 ~~F~pG--P~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ea   82 (361)
T d2c0ra1           5 YNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAM   82 (361)
T ss_dssp             EECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHH
T ss_pred             cccCCC--CcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHH
Confidence            445443  3346899999999988653211  1   11 2233456777788888888888644 677776654 55567


Q ss_pred             HHHHhcCCCCEEEEeCCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768          105 IVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       105 ~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~  182 (400)
                      ++..+.++|+++++.....++  +....+..|..+..+ ..+..+ .++++.+++.+...+   .+.   .+|.||...+
T Consensus        83 ~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~~~~~~~~~~~~~~---~~~---v~~~tg~~~~  154 (361)
T d2c0ra1          83 IPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAA-SSEASN-YMTLPKLQEIQLQDN---AAY---LHLTSNETIE  154 (361)
T ss_dssp             HHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEE-ECGGGT-TCSCCCGGGCCCCTT---EEE---EEEESEETTT
T ss_pred             HHhccccCCCceEEEeechhhhhhhhhhhhcCceeeee-cccccc-ccchhhhhhhcccCc---ceE---EEEeccccee
Confidence            777778888888777655433  446677888887777 554333 457777777666443   333   3567888888


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCC--------cHHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE--------VEGFA  254 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~--------~~~~~  254 (400)
                         +.++.++|+++|+++++|.+++.   ++.+......  ++.+.|.+|.++++|....++.....        .....
T Consensus       155 ---~~~i~~~~~~~~al~~vDavss~---g~~~id~~~~--di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T d2c0ra1         155 ---GAQFKAFPDTGSVPLIGDMSSDI---LSRPFDLNQF--GLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRY  226 (361)
T ss_dssp             ---TEECSSCCCCTTSCEEEECTTTT---TSSCCCGGGC--SEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCH
T ss_pred             ---cceEEEeeccCCceEEEEeeccc---cccccccccc--eeEEEecccccccccCcEEEEEhHHhhhCcccccccccc
Confidence               67778899999999999999984   3444444333  45566789999866644444433320        00001


Q ss_pred             HHHHHhhccCCcCccHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHHhccCCC-Cccc---CCCCceEEEeeCCC
Q 015768          255 TQLLKVQDNIPICASIISQHLALYSLQ--TGPEWVTERVKDLVRNREIIREALSPLGE-GAVK---GGEGAIYLWARLPE  328 (400)
Q Consensus       255 ~~l~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~---~~~~~~~~~~~~~~  328 (400)
                      ......... ....++.....+...+.  ...........+.++.+..+......... ....   ...+...+.+.+++
T Consensus       227 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~  305 (361)
T d2c0ra1         227 DTYVKNNSL-YNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS  305 (361)
T ss_dssp             HHHHHTTTC-SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC
T ss_pred             ccccccccc-cccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEEEEECCC
Confidence            111111111 11122222111111111  11122344445555555555554444322 1111   12234556677765


Q ss_pred             CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .. +..++...| +++||.+..|..+  -+.+||++.. ++.||++.+++.|++..++
T Consensus       306 ~~-~~~~~~~~L-~~~GI~~~~G~~~--~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         306 EE-LEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             HH-HHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cc-cHHHHHHHH-HHCCCEEecCCCc--CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            33 456777766 6899999887533  2459999777 8999999999999887654

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=2.1e-16  Score=144.42  Aligned_cols=333  Identities=10%  Similarity=-0.032  Sum_probs=189.5

Q ss_pred             EEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHH
Q 015768           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNI  105 (400)
Q Consensus        33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~  105 (400)
                      .+|..|  +...|++|+++|.+.+.+....+.+      ......++.+.+.+.+++.++.+.+ .|++++|++.+.+.+
T Consensus         3 ~nF~pG--P~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a   80 (360)
T d1bjna_           3 FNFSSG--PAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA   80 (360)
T ss_dssp             EECCSS--SCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred             EEeCCC--CcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhh
Confidence            456444  2346899999999988653211111      1222345667777777777788644 678887766665544


Q ss_pred             -HHHhcCCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768          106 -VLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (400)
Q Consensus       106 -~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~  182 (400)
                       ...+..+++.+++....+.+.  ....+..|..++.+ ..+.++ ..+.+.++..+..++  +++++++.+|.||...+
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~v~v~~~~~~t~~~~~  156 (360)
T d1bjna_          81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFD-AKVTVD-GLRAVKPMREWQLSD--NAAYMHYCPNETIDGIA  156 (360)
T ss_dssp             HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEE-CEEEET-TEEEECCGGGCCCCS--SCSCEEECSEETTTTEE
T ss_pred             hhhcccccccccceecccchhhhhHHHHhhcCccceee-ccccCC-CcchhhhhhhhccCC--ceeEEEecccccccCcc
Confidence             445567778888877666553  34556666666555 333222 345556666666555  77777778888988877


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc--------HHHH
Q 015768          183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFA  254 (400)
Q Consensus       183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~--------~~~~  254 (400)
                         +..+.  ++.+++.+++|.+.+..   ..+.  .....++++.|.+|.+++++...+++......        ....
T Consensus       157 ---~~~i~--~~~~~~~v~vDa~~~~~---~~~v--d~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (360)
T d1bjna_         157 ---IDETP--DFGADVVVAADFSSTIL---SRPI--DVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDY  226 (360)
T ss_dssp             ---CCCCC--CCCTTCCEEEECTTTTT---SSCC--CGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCH
T ss_pred             ---cccee--cccccceeeeeeecccc---ceee--eeccceeEEEEcccccccCCCceeEeeehhhhhccccCCcchhh
Confidence               33332  45678999999988833   2222  23345688889999997555434444433210        0001


Q ss_pred             HHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCccc---CCCCceEEEeeCCCCC
Q 015768          255 TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVK---GGEGAIYLWARLPEKH  330 (400)
Q Consensus       255 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~  330 (400)
                      ....................+....+.. .........++..+....+...+...+.....   ...+...+.+.+++..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~  306 (360)
T d1bjna_         227 SILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSA  306 (360)
T ss_dssp             HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGG
T ss_pred             HHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccccceEEEEEcCCcc
Confidence            1111111111222222222222222111 11223444445555555555555444331111   1122344556776543


Q ss_pred             CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          331 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       331 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                       +.+.+...+ +++||.+..|..  .-+.+|+|+.. +|+||++.+++.|++..++
T Consensus       307 -~~~~~~~~l-~~~Gi~~~~G~~--~~g~~Ris~~~~~t~edV~~li~~l~e~~~~  358 (360)
T d1bjna_         307 -LDKLFLEES-FAAGLHALKGHR--VVGGMRASIYNAMPLEGVKALTDFMVEFERR  358 (360)
T ss_dssp             -GHHHHHHHH-HHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             -cHHHHHHHH-HHCCCEeecCCC--ccCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence             566677655 589999988742  22459999877 8999999999999986654

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.62  E-value=1.6e-14  Score=131.93  Aligned_cols=326  Identities=13%  Similarity=0.081  Sum_probs=177.5

Q ss_pred             eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC---CC---CCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHH
Q 015768           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISK---YG---ADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVN  104 (400)
Q Consensus        32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---y~---~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~  104 (400)
                      +.+|+.|-  ...|++|+++|.+.+.+....+   ++   .+....++.+.+.+.+++.++++.+ .|++++|++++...
T Consensus         4 ~~nF~pGP--~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~~   81 (360)
T d1w23a_           4 VFNFNAGP--SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT   81 (360)
T ss_dssp             CEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eeEeCCCC--cCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            45566653  3457999999999876521110   00   1222345666667777777788765 57778887777665


Q ss_pred             HHHH-hcCCCCEEEEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768          105 IVLT-LCDAGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (400)
Q Consensus       105 ~~~~-l~~~gd~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~  181 (400)
                      +... +.++++.+++....+++..  ..++..+...+.. ...... ...++.++......   +.+.   .+|.||...
T Consensus        82 ~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~---~~~~---~~~~tg~~~  153 (360)
T d1w23a_          82 MLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAA-STKANS-YQSIPDFSEFQLNE---NDAY---LHITSNNTI  153 (360)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEE-ECGGGT-SCSCCCGGGCCCCT---TEEE---EEEESEETT
T ss_pred             HHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceee-cccccc-ccchhhhhhccccc---ccce---eEecCCccc
Confidence            5554 4567788888776664433  4455666655554 222211 22334444433322   3333   356789999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH----
Q 015768          182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL----  257 (400)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l----  257 (400)
                      |   +.+|.++|+++|+++++|.+++.+   +.+......+.+++  +++|..+++|. .|+++.+   +...+..    
T Consensus       154 ~---~~~i~~~~~~~g~l~ivDavqs~g---~~~id~~~~~vd~~--~~~~~k~~~~~-~~~~~~~---~~~~~~~~~~~  221 (360)
T d1w23a_         154 Y---GTQYQNFPEINHAPLIADMSSDIL---SRPLKVNQFGMIYA--GAQKNLGPSGV-TVVIVKK---DLLNTKVEQVP  221 (360)
T ss_dssp             T---TEECSSCCCCCSSCEEEECTTTTT---SSCCCGGGCSEEEE--ETTTTTSCTTC-EEEEEEH---HHHCSCCTTCC
T ss_pred             c---ceeeeeccccceeeEEeecccccc---ccccccccccceEE--eeccccccCCc-ceeeEec---hhhhcccccCC
Confidence            9   788889999999999999999943   44444455565555  44555543332 3444433   1111110    


Q ss_pred             -------HHhhccCCcCccHHHHHHHHH----HhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc----CCCCceEE
Q 015768          258 -------LKVQDNIPICASIISQHLALY----SLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK----GGEGAIYL  322 (400)
Q Consensus       258 -------~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~----~~~~~~~~  322 (400)
                             .........++......+...    .++.+  ......++.....................    ...+...+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vv  299 (360)
T d1w23a_         222 TMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLG--GAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNV  299 (360)
T ss_dssp             GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEE
T ss_pred             cchhhhhhhhhhhhcccccceeeechhHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEE
Confidence                   000111122222222222222    22221  12222333333333333333332221111    11223356


Q ss_pred             EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768          323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  385 (400)
Q Consensus       323 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~  385 (400)
                      .+.+++.. +.+++...| .++||.+..|..+  -+.+|+|+.. +|.||++.+++.+++..+.
T Consensus       300 sf~i~~~~-~~~~~~~~l-~~~GI~~~~G~~~--~ggiRiS~~~~~t~e~V~~Li~~~~~~~~~  359 (360)
T d1w23a_         300 TFNLRNEE-LNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             EEECSSHH-HHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCc-cHHHHHHHH-HHCCCeeeeCCCc--cCcEEEEeeCCCCHHHHHHHHHHHHHHHhc
Confidence            67776432 355677655 5899999887543  2469999765 7999999999988887653

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.48  E-value=5.8e-12  Score=116.93  Aligned_cols=334  Identities=17%  Similarity=0.124  Sum_probs=204.7

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc---CCC----
Q 015768           44 PPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAG----  113 (400)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~---~~g----  113 (400)
                      -+|.+.+.+.+...  ...+|.|   ++|.-+..-+....+.++.|++.-+.-+..|+|.+-+.++.+..   +.+    
T Consensus        77 y~P~v~~~~~~~~T--aYTPYQPaEiSQG~LQalfEfQtmi~eLTGMdvaNaS~yDGatA~aeA~~ma~r~~~~~~~~~~  154 (471)
T d1wyub1          77 YNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRT  154 (471)
T ss_dssp             CCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cCcchhhhHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHhhhcccccc
Confidence            45788888776433  2667876   34444444444444666668775555556777766666555542   122    


Q ss_pred             CEEEEeCCCccchh-HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768          114 DSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (400)
Q Consensus       114 d~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l  192 (400)
                      ..+.+..+.+.... ......+..++.+ +.+..+ ..+.+.++.....+.  .++++++|++..+..-.   ...+.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--a~v~v~~p~~~g~~e~~---~~~~~~~  227 (471)
T d1wyub1         155 RRVVLVPDSAHGSNPATASMAGYQVREI-PSGPEG-EVDLEALKRELGPHV--AALMLTNPNTLGLFERR---ILEISRL  227 (471)
T ss_dssp             CCEEEEETTSCTHHHHHHHHTTCEEEEE-CBCTTS-SBCHHHHHHHCSTTE--EEEEECSSCTTSCCCTT---HHHHHHH
T ss_pred             cccccCCcccccceeeeeecccceeecc-cccccc-cccchhhhhhhhccc--cceeeccCCCcccccch---hhhhHHH
Confidence            24455555554444 4445567777777 655444 568888887776554  88888999887655555   7788888


Q ss_pred             HHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHHHHHHHHH---------
Q 015768          193 CKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLK---------  259 (400)
Q Consensus       193 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~~~~~l~~---------  259 (400)
                      +++.+..+++|.+......+-.+  ......++++.+.++.+|.    +|..+|++.++   +++...+..         
T Consensus       228 ~h~~g~~~~~~~~~~~~~~~l~~--p~~~g~div~vg~~q~~G~P~~~GGP~~G~~a~~---~~~~R~~PGRiV~~~~~~  302 (471)
T d1wyub1         228 CKEAGVQLYYDGANLNAIMGWAR--PGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVK---AHLAPYLPVPLVERGEEG  302 (471)
T ss_dssp             HHHHTCEEEEEGGGGGGTTTTCC--HHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEEC---GGGGGGCCSCEEEECSSC
T ss_pred             HHhccccccccccchhhhhhccc--cCcccccccccccccccccccccccccccceeeh---hhhhccCCCceecCCCcc
Confidence            88999988888765543322111  1112233444555665543    45567899888   555544421         


Q ss_pred             ----------hhccCCcCccHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-CceEEEeeCC
Q 015768          260 ----------VQDNIPICASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLP  327 (400)
Q Consensus       260 ----------~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~  327 (400)
                                +++....+.+.+...++..++. .+.+.+++..+....++.++++.|+..+. .+..+. -..-+.++++
T Consensus       303 ~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~~G~-~~~~~~~ff~EFvv~~~  381 (471)
T d1wyub1         303 FYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGY-RVPYDGPSMHEFVAQPP  381 (471)
T ss_dssp             EEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-BCSSCSSCCSCEEEBCS
T ss_pred             ccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhhcCc-eeccCcceeeEEeecCC
Confidence                      1111123334444444444443 25577899999999999999999977543 443222 1122456666


Q ss_pred             CCCCCHHHHHHHHHHhcCeEEeCCCcc-C-CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccCccccc
Q 015768          328 EKHLDDFEVVRWLAHRHGVVVIPGGAC-G-CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGMVQEH  395 (400)
Q Consensus       328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~-~-~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  395 (400)
                      .. .+..++.++|+ ++|+.- +...| . ..+.+-|++.- .|.+|||.+++.|++++++..+--+.++|
T Consensus       382 ~~-~~~~~i~k~L~-~~G~~~-~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~~i~~e~~~~~~~ap~  449 (471)
T d1wyub1         382 EG-FRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKKPKEWLENAPY  449 (471)
T ss_dssp             TT-CCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTSCHHHHHTCCC
T ss_pred             CC-CCHHHHHHHHH-HcCCCC-CcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHhhHHHHHhCCc
Confidence            44 36778888887 788853 22222 2 36788899876 89999999999999999876543333443

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.48  E-value=2.8e-12  Score=117.54  Aligned_cols=299  Identities=16%  Similarity=0.087  Sum_probs=193.3

Q ss_pred             CCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchhHHH----Hhc
Q 015768           61 ISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSF----QMT  133 (400)
Q Consensus        61 ~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~~~----~~~  133 (400)
                      ..+|.+  .+|.-++.-++..++.+..|.+.-+...-.|++.....++.+.. ....++++...+|+..+...    +..
T Consensus        95 ytPyqpE~sQG~Lq~l~e~q~~l~eltGmd~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~  174 (437)
T d1wyua1          95 YTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAV  174 (437)
T ss_dssp             CSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHT
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhCCCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccc
Confidence            445554  35666677777777888888876666666788777777666554 24578999999997776543    567


Q ss_pred             CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC
Q 015768          134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG  213 (400)
Q Consensus       134 g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~  213 (400)
                      |++++.+ |.++.+.  +.++    +.+++  .++++++|++ .|.+-+   ++++.+++++.|.+++.|..-..  .++
T Consensus       175 g~~vv~v-~~~~~~~--~~~~----~~~~~--Aavmi~~Pnt-~G~~ed---~~~i~~~~h~~G~l~~~~ad~~a--l~~  239 (437)
T d1wyua1         175 GAKLLTL-PLEGGRT--PLPE----VGEEV--GAVVVQNPNF-LGALED---LGPFAEAAHGAGALFVAVADPLS--LGV  239 (437)
T ss_dssp             TCEEEEE-CCBTTBC--CCCC----CCTTE--EEEEEESSCT-TSBCCC---HHHHHHHHHHTTCEEEEECCTTG--GGT
T ss_pred             eeeEEee-ecccccc--hhhh----hccce--eEEEEccccc-cccccc---hHHHHHHhhhccceEEeeechhh--hhc
Confidence            9999999 7765542  2222    33444  8999999965 688866   88899999999998887754322  222


Q ss_pred             CCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHHHHHHHH----------------------------Hhh
Q 015768          214 RKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLL----------------------------KVQ  261 (400)
Q Consensus       214 ~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~~~~~l~----------------------------~~~  261 (400)
                      .. .+...+.|+++++ +|.||.    +|...|++.++   +++...+.                            +.+
T Consensus       240 l~-~Pg~~GaDi~~g~-~q~fg~p~g~GGP~~G~~a~~---~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRek  314 (437)
T d1wyua1         240 LK-PPGAYGADIAVGD-GQSLGLPMGFGGPHFGFLATK---KAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAK  314 (437)
T ss_dssp             BC-CHHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEEC---GGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGG
T ss_pred             cc-cccccccceEeec-cceeccccCCCcCcccccccc---chhhccccccccccccccCCcccceeecccccccccccc
Confidence            11 1223356688777 666542    34557888888   34433321                            111


Q ss_pred             ccCC-cCccHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc-eEEEeeCCCCCCCHHHHHH
Q 015768          262 DNIP-ICASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA-IYLWARLPEKHLDDFEVVR  338 (400)
Q Consensus       262 ~~~~-~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  338 (400)
                      .... .+.+.+....+..++. .+.+.+++..+....+++++.+.|.+++++....+... .=+.++++.   +..++.+
T Consensus       315 atsnict~q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~~~---~~~~i~k  391 (437)
T d1wyua1         315 AKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPK---DPEAVRR  391 (437)
T ss_dssp             SSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSS---CHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcCCeeccCCCCeeeEEEEECCC---CHHHHHH
Confidence            1111 2233333333333333 34567888889999999999999999877555543311 223455543   5788888


Q ss_pred             HHHHhcCeEEeC-CCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768          339 WLAHRHGVVVIP-GGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  383 (400)
Q Consensus       339 ~l~~~~gi~v~~-g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l  383 (400)
                      +|+ ++|+.... -..+...+.+.+++.- .|.++++++++.|++++
T Consensus       392 ~L~-d~G~~~~~~~~~~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         392 ALA-ERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             HHH-HTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             HHH-hCCCCCCcccccCCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence            886 88986311 1112246789999986 89999999999998763