Citrus Sinensis ID: 015769

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Protein Sequence
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccccccccccccccccEEEEEEEEEcccccEEEEEEcccccEEEEEEEEEEEEcccEEEEEEEEEEEEEcccccccccccccccccccccEEEEEEEEcccccEEEEEcccccEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHccccEEEEEEEccccccHHHHcccccccEEEEcccccEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEcEEEEcccccccccccEEEEEEEEEEccEEEEEcccccEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEcccccccccccccccccccccccccccccEEEccEEEEccccccccEEcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccHHccccEEEEEEccccccccccccHcccccccEEEEEEEEccccEEEEEEEccccccEEEEEEEEEEccccEEEEEEEEEEEccccccccccccccccccccccccEEEEEEEcccccEEEEccccccEEEEEccccHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHcccEEEEEcccccccHHHHHHHccccccEEEEccccEEEEEEccccEEEEEEEEEEEccccEEEEEcccEEEEEccccccEcccccEEEEEEEEcccEEEEEccccEEEEEEEccccccc
Coil and Loop (DISEMBL)
malkfhitnvnfhfcacsssfsrstlafsssklsncsqnrtnglvaqssltdQQQLAFTGEENQLIDALIGIqgrgrsasarqLNDVECAVKVLEglqgvpdptgsslieGRWQlmfttrpgtaspiqrtfvgvETFSVFQEIslrtndprvsniVKFSEAIGELKVEAAASIKDGKRILFQFDKaafsfkflpfkfpypvpfrllgdeakgwldttylspsgnlrisrgnkgttfvlqkkteprQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDswienagnglmGKQIVKKNGQMKFEVDILLgfkfsmtgtyaksstntynvtmddaaiicggfgypikmETKINLQllysddkmrisrGYNNILFVHLrtdgsnqk
Flexible Loop (DISEMBL)
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEglqgvpdptgsSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQeislrtndprvsnIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTylspsgnlrisrgnkgttfvlqkkteprqTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFvhlrtdgsnqk
Low Complexity Region (SEG)
MALKFHITNVNFHFcacsssfsrstlafsssklsNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAeeerellegeWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Disordered region (IsUnstruct)
**LKFHITNVNFHFCACSSSF***********************************AFTGEENQLIDALIGIQGRGR*ASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVL*****************************************LEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR*******
Disordered Region (DISOPRED)
*****************************************************************IDALIGIQ************DVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRPG***PIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLL*DEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQT*********Q*EQAI********************EWQMLWSS*M*******NAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVH**T******
Disordered Region (DISEMBL)
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSN*********LLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Disordered Region (DISPRO)
*ALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTD*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	400	2.2.26 [Sep-21-2011]
Q8LAP6	409	Probable plastid-lipid-as	yes	no	0.977	0.955	0.629	1e-150
Q94KU6	319	Plastid lipid-associated	N/A	no	0.435	0.545	0.269	3e-06
O49629	310	Probable plastid-lipid-as	no	no	0.435	0.561	0.260	1e-05
P80471	326	Light-induced protein, ch	N/A	no	0.44	0.539	0.264	2e-05
O99019	326	Light-induced protein, ch	N/A	no	0.44	0.539	0.259	6e-05
Q9LU85	242	Probable plastid-lipid-as	no	no	0.387	0.640	0.243	0.0001
Q6K439	319	Probable plastid-lipid-as	no	no	0.422	0.529	0.271	0.0003

>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1

 Score =  530 bits (1365), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 257/408 (62%), Positives = 322/408 (78%), Gaps = 17/408 (4%)

Query: 1   MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLS-------------NCSQNRTNGLVAQ 47
           +A++F+   ++   C C    S  +L+  S + +             NC   R +   + 
Sbjct: 2   VAVRFYAVEMSLP-CLCPCPSSPISLSLCSPRFNLLNTTSRRLGLSRNCRTLRIS-CSSS 59

Query: 48  SSLTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS 106
           S++TDQ QQ +F   E +LIDALIGIQGRG+SAS +QLNDVE AVKVLEGL+G+ +PT S
Sbjct: 60  STVTDQTQQSSFNDAELKLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDS 119

Query: 107 SLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLR-TNDPRVSNIVKFSEAIGEL 165
            LIEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+ TNDPRVSNIVKFS+ IGEL
Sbjct: 120 DLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGEL 179

Query: 166 KVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNL 225
           KVEA ASIKDGKR+LF+FD+AAF  KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNL
Sbjct: 180 KVEAVASIKDGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNL 239

Query: 226 RISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQ 285
           RISRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF++SN ++AE+  ELLEG WQ
Sbjct: 240 RISRGNKGTTFVLQKETVPRQKLLATISQDKGVAEAIDEFLASNSNSAEDNYELLEGSWQ 299

Query: 286 MLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNV 345
           M+WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM G + KS ++TY++
Sbjct: 300 MIWSSQMYTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMKGKFIKSESSTYDL 359

Query: 346 TMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR 393
            MDDAAII G FGYP+ +   I L++LY+D+KMRISRG++NI+FVH+R
Sbjct: 360 KMDDAAIIGGAFGYPVDITNNIELKILYTDEKMRISRGFDNIIFVHIR 407

Arabidopsis thaliana (taxid: 3702)

>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 49/223 (21%)

Query: 65  LIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSS-LIEGRWQLMFTTRPGT 123
           L+D+L G   RG SAS+    ++   +  LE     P PT +  L+ G+W L +T+  G 
Sbjct: 99  LVDSLYGTD-RGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGL 157

Query: 124 ASPIQRTFVGVETFSVFQEIS--LRTNDPRVSNIVKFSEAIGELKVEAAA--SIKDGKRI 179
              + R   G+       EIS  + +++  V N V F+  +    +   A   I+  KR+
Sbjct: 158 FPLLSR---GIVPLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRV 214

Query: 180 LFQFDKAAFS-------------FKFLPFKFPY-------------------------PV 201
             +F++                  +FL  K                            P+
Sbjct: 215 QIKFEEGVIGTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPL 274

Query: 202 PFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
            F L GD A+ WL TTYL    ++RISRG+ G+ FVL K+  P
Sbjct: 275 KFSLPGDSAQSWLLTTYL--DKDIRISRGDGGSVFVLIKEGSP 315

May stabilize the accumulated carotenoid structures.

Brassica campestris (taxid: 3711)

>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 49/223 (21%)

Query: 65  LIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSS-LIEGRWQLMFTTRPGT 123
           L+D+L G   RG SAS+    ++   +  LE     P PT +  L+ G+W L +T+    
Sbjct: 90  LVDSLYGTD-RGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNL 148

Query: 124 ASPIQRTFVGVETFSVFQEIS--LRTNDPRVSNIVKFSEAIG--ELKVEAAASIKDGKRI 179
              + R   G+       EIS  + +++  V N V+F+  +G   +   A   I+  KR+
Sbjct: 149 FPLLSR---GIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRV 205

Query: 180 LFQFDKAAFSFKFL--PFKFPY------------------------------------PV 201
             +F++       L    + P                                     P+
Sbjct: 206 QIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPL 265

Query: 202 PFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
            F L  D A+ WL TTYL    ++RISRG+ G+ FVL K+  P
Sbjct: 266 KFSLPADNAQSWLLTTYL--DKDIRISRGDGGSVFVLIKEGSP 306

Arabidopsis thaliana (taxid: 3702)

>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 51/227 (22%)

Query: 62  ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR 120
           + QL D+L G   RG SAS+    ++   +  LE     P PT + +L+ G+W L +T+ 
Sbjct: 103 KKQLADSLYG-TNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSF 161

Query: 121 PGTASPIQR---TFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAA--SIKD 175
            G    + R     V VE  S     ++ +    V N V F+  +    +   A   ++ 
Sbjct: 162 SGLFPLLSRGNLPLVRVEEISQ----TIDSESFTVQNSVVFAGPLATTSISTNAKFEVRS 217

Query: 176 GKRILFQFDKAAF-------------SFKFL-------PFK------------------F 197
            KR+  +F++                + +FL       PFK                   
Sbjct: 218 PKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISS 277

Query: 198 PYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
             P+ F +  + A+ WL TTYL     LRISRG+ G+ FVL K+  P
Sbjct: 278 QPPIKFPITNNNAQSWLLTTYLD--DELRISRGDAGSVFVLIKEGSP 322

Required for normal plant growth. May be both photoprotective and play an ancillary role in photosynthesis. May structurally stabilize thylakoids during osmotic and oxidative stress.

Solanum tuberosum (taxid: 4113)

>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1

 Score = 48.9 bits (115), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 51/227 (22%)

Query: 62  ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR 120
           + QL D+L G   RG SAS+    ++   +  LE     P PT + +L+ G+W L +T+ 
Sbjct: 103 KKQLADSLYGT-NRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSF 161

Query: 121 PGTASPIQR---TFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAA--SIKD 175
            G    + R     V VE  S     ++ +    V N V F+  +    +   A   ++ 
Sbjct: 162 SGLFPLLSRGNLPLVRVEEISQ----TIDSESFTVQNSVVFAGPLATTSISTNAKFEVRS 217

Query: 176 GKRILFQFDKAAF-------------SFKFL-------PFK------------------F 197
            KR+  +F++                + +FL       PFK                   
Sbjct: 218 PKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISS 277

Query: 198 PYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
             P+ F +  + A+ WL TTYL     LRI RG+ G+ FVL K+  P
Sbjct: 278 QPPIKFPITNNNAQSWLLTTYL--DDELRIPRGDAGSVFVLIKEGSP 322

Required for normal plant growth. May be both photoprotective and play an ancillary role in photosynthesis. May structurally stabilize thylakoids during osmotic and oxidative stress.

Solanum demissum (taxid: 50514)

>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 26/181 (14%)

Query: 62  ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRP 121
           + +L++A+  ++ RG +AS      ++   + +E +    +P  S L+ G+W+L++TT  
Sbjct: 75  KQELLEAIEPLE-RGATASPDDQLRIDQLARKVEAVNPTKEPLKSDLVNGKWELIYTTSA 133

Query: 122 GTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVK---FSEAIGELKVEAAASIKDGKR 178
                 +  F  + + + +Q I++ T   +V N+     ++   G++K   +  +     
Sbjct: 134 SILQAKKPRF--LRSITNYQSINVDTL--KVQNMETWPFYNSVTGDIKPLNSKKVA---- 185

Query: 179 ILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVL 238
           +  Q  K      F+P K P         D A+G L+ TY+     LR+SRG+KG  F+L
Sbjct: 186 VKLQVFKI---LGFIPIKAP---------DSARGELEITYV--DEELRLSRGDKGNLFIL 231

Query: 239 Q 239
           +
Sbjct: 232 K 232

Arabidopsis thaliana (taxid: 3702)

>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 89/225 (39%), Gaps = 56/225 (24%)

Query: 64  QLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR-- 120
           +L +AL G + RG  AS+    +V   +  LE     P PT + +L+ G+W L +T+   
Sbjct: 98  KLKEALYGTE-RGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQ 156

Query: 121 --PGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAA--SIKDG 176
             P   S      V VE  S     ++ + +  V N +KFS  +    V   A   ++  
Sbjct: 157 LFPLLGSGSLPQLVKVEEISQ----TIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSP 212

Query: 177 KRILFQFDKAAFSFK------FLPFKF--------------------------------- 197
           KR+  +FD+             LP KF                                 
Sbjct: 213 KRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQ 272

Query: 198 -PYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
            P  +P R   D A+ WL TTYL     LRISRG+  + FVL K+
Sbjct: 273 PPLKIPIRT--DNAESWLLTTYL--DDELRISRGDGSSIFVLFKE 313

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
224053000	399	predicted protein [Populus trichocarpa]	0.99	0.992	0.744	1e-170
255574416	409	structural molecule, putative [Ricinus c	0.89	0.870	0.775	1e-166
225435622	396	PREDICTED: probable plastid-lipid-associ	0.97	0.979	0.699	1e-155
449448776	436	PREDICTED: probable plastid-lipid-associ	0.887	0.814	0.754	1e-154
356576885	377	PREDICTED: probable plastid-lipid-associ	0.935	0.992	0.670	1e-150
297847472	409	plastid-lipid associated protein pap [Ar	0.982	0.960	0.650	1e-148
30694898	409	putative plastid-lipid-associated protei	0.977	0.955	0.629	1e-148
255646338	377	unknown [Glycine max]	0.857	0.909	0.728	1e-146
388509688	380	unknown [Lotus japonicus]	0.932	0.981	0.656	1e-140
357445071	388	hypothetical protein MTR_1g116320 [Medic	0.955	0.984	0.643	1e-140

>gi|224053000|ref|XP_002297657.1| predicted protein [Populus trichocarpa] gi|222844915|gb|EEE82462.1| predicted protein [Populus trichocarpa]

 Score =  603 bits (1554), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 300/403 (74%), Positives = 341/403 (84%), Gaps = 7/403 (1%)

Query: 1   MALKFHIT-NVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTD--QQQLA 57
           MALKFH   +++       + F+ S       KL   S  +T+  V QSSL D  QQQ++
Sbjct: 1   MALKFHAAIHLSLQLSPSPTLFAPSFC--KPQKLLKSSVKKTH--VCQSSLVDEQQQQIS 56

Query: 58  FTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMF 117
           F  +ENQLI+AL+GIQGRG+SAS +QLN+V  AVKVLEGL+GV +PTGS+LIEGRWQLMF
Sbjct: 57  FNEQENQLINALVGIQGRGKSASPQQLNEVGHAVKVLEGLEGVSEPTGSNLIEGRWQLMF 116

Query: 118 TTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGK 177
           TTRPGTASPIQRTFVGV+ FSVFQE+ LRTNDPRVSNIVKFS AIGELKVEAAA+I++GK
Sbjct: 117 TTRPGTASPIQRTFVGVDFFSVFQEVYLRTNDPRVSNIVKFSNAIGELKVEAAATIENGK 176

Query: 178 RILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFV 237
           RILFQFD+AAFSF FLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFV
Sbjct: 177 RILFQFDRAAFSFNFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFV 236

Query: 238 LQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSW 297
           LQKKTEPRQ LLSAI TGT V +AINEFI  NQ+ A++E EL++GEWQM+WSSQMETDSW
Sbjct: 237 LQKKTEPRQRLLSAIWTGTGVLEAINEFIKLNQNVAKDEMELIDGEWQMIWSSQMETDSW 296

Query: 298 IENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGF 357
           IENAG GLMGKQIV KNGQ+KF VDILLG +FSMTGT+ KSS NTY+V MDDAAII G F
Sbjct: 297 IENAGRGLMGKQIVTKNGQLKFVVDILLGVRFSMTGTFVKSSPNTYDVKMDDAAIIGGMF 356

Query: 358 GYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK 400
           G P++METKINL+LLYSDDK+RISRGY NI+FVH RTDG+ QK
Sbjct: 357 GLPVEMETKINLELLYSDDKIRISRGYKNIVFVHARTDGTRQK 399

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574416|ref|XP_002528121.1| structural molecule, putative [Ricinus communis] gi|223532460|gb|EEF34251.1| structural molecule, putative [Ricinus communis]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 277/357 (77%), Positives = 321/357 (89%), Gaps = 1/357 (0%)

Query: 45  VAQSSLTD-QQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDP 103
           V QSSL D QQQ++FT  E  LIDALIGIQGRG+SAS +QL DVE AV+VLEGL GVPDP
Sbjct: 53  VCQSSLVDEQQQISFTEHETHLIDALIGIQGRGKSASPQQLQDVESAVEVLEGLTGVPDP 112

Query: 104 TGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIG 163
           T SSLIEG+WQLMFTTRPGTASPIQRTFVGV+ FSVFQE+ L+TNDPRVSNIV+FS+ IG
Sbjct: 113 TNSSLIEGQWQLMFTTRPGTASPIQRTFVGVDFFSVFQEVYLQTNDPRVSNIVRFSDVIG 172

Query: 164 ELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSG 223
           ELKVEAAA+I++GKRI+F+FD+AAFS +FLPFK PYPVPFRLLGDEAKGWLDTTYLSPSG
Sbjct: 173 ELKVEAAAAIENGKRIIFRFDRAAFSLRFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSG 232

Query: 224 NLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGE 283
           NLRISRGNKGTTFVLQK+TEPRQ LL+AISTGT+V++AI+EF+ +NQ  A +E ELLEGE
Sbjct: 233 NLRISRGNKGTTFVLQKRTEPRQALLAAISTGTKVKEAIDEFVEANQKVATDEIELLEGE 292

Query: 284 WQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTY 343
           WQM+WSSQ ETDSWIENAGNGLMGKQI+KKNGQ+KF VDI+ G +FSMTGTY KS T TY
Sbjct: 293 WQMIWSSQTETDSWIENAGNGLMGKQIIKKNGQLKFLVDIIFGLRFSMTGTYEKSGTKTY 352

Query: 344 NVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK 400
           NV MDDAAII G +G P++METKIN++LLY+D+K+RIS+GYN+I+FVH+RTDG  QK
Sbjct: 353 NVIMDDAAIIGGPYGLPVEMETKINMELLYADEKIRISKGYNSIVFVHVRTDGGEQK 409

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435622|ref|XP_002283329.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic [Vitis vinifera] gi|297746405|emb|CBI16461.3| unnamed protein product [Vitis vinifera]

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/399 (69%), Positives = 321/399 (80%), Gaps = 11/399 (2%)

Query: 3   LKFHITNVNFHFCAC---SSSFSRSTLAFSSSKLSNCSQNRTNGLVAQ---SSLTDQQ-Q 55
           +   I N+ F        S  F   T+  SS +   C  +R N L+ +   SSL D+Q Q
Sbjct: 1   MAIEIANLGFQLNPLPTFSPVFVPRTVLKSSKR---CRFDRRNLLLLRPPASSLVDEQPQ 57

Query: 56  LAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQL 115
           ++FT  EN+LID+L+GIQGRGRSAS +QL+DVE AV+ LEGL GVPDPT SSLIEGRWQL
Sbjct: 58  VSFTEPENRLIDSLVGIQGRGRSASPQQLSDVESAVQALEGLGGVPDPTSSSLIEGRWQL 117

Query: 116 MFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKD 175
           MFTTRPGTASPIQRTFVGV+ F+VFQE+ LRT+DPRVSNIV+FSEAIGELKVEAAASIKD
Sbjct: 118 MFTTRPGTASPIQRTFVGVDNFNVFQEVYLRTDDPRVSNIVRFSEAIGELKVEAAASIKD 177

Query: 176 GKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTT 235
           GKRILF+FD+AAFSFKFLPFK PYPVPFRLLGDEAKGWLDTTYLS SGNLRISRGNKGTT
Sbjct: 178 GKRILFRFDRAAFSFKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSQSGNLRISRGNKGTT 237

Query: 236 FVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETD 295
           FVLQK TEPRQ  LS IS GT V +AINEFIS NQ+ A  E +LLEGEWQM+WSSQ ETD
Sbjct: 238 FVLQKNTEPRQRFLSVISKGTGVMEAINEFISLNQNKATGEPQLLEGEWQMIWSSQQETD 297

Query: 296 SWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICG 355
           SW+ENA NGLMG QIVK   Q+KF VDILLGF+FSM GT+ K+   TY VTM+DAAI+ G
Sbjct: 298 SWLENAANGLMGTQIVKGE-QLKFVVDILLGFRFSMIGTFVKTGATTYEVTMNDAAIVAG 356

Query: 356 GFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRT 394
             G P++ME+K NL+LLY+DDK+RI+RG+ NI FVHLR 
Sbjct: 357 PVGLPMEMESKFNLELLYTDDKIRITRGFRNITFVHLRV 395

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448776|ref|XP_004142141.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic-like [Cucumis sativus] gi|449503596|ref|XP_004162081.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic-like [Cucumis sativus]

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 271/359 (75%), Positives = 306/359 (85%), Gaps = 4/359 (1%)

Query: 44  LVAQSSLTDQQQ---LAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGV 100
           L  +SSL D+QQ   ++F+  EN LIDALIG+QGRGRS S++QL++VE AV VLEGL+GV
Sbjct: 78  LRCRSSLVDEQQKEVVSFSQPENSLIDALIGVQGRGRSVSSQQLSNVERAVSVLEGLEGV 137

Query: 101 PDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSE 160
            DPT SSLIEGRWQL+FTTRPGTAS IQRTFVGV+ FSVFQEI LRTNDPRVSNIVKFS+
Sbjct: 138 RDPTNSSLIEGRWQLVFTTRPGTASIIQRTFVGVDFFSVFQEIFLRTNDPRVSNIVKFSD 197

Query: 161 AIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLS 220
           AIGELKVEAAAS+KDGKRILFQFD+AAFSFKFLPFK PYPVPF+LLGDEAKGWLDTTYLS
Sbjct: 198 AIGELKVEAAASVKDGKRILFQFDRAAFSFKFLPFKVPYPVPFKLLGDEAKGWLDTTYLS 257

Query: 221 PSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELL 280
           PSGNLRISRGNKGTTFVLQK+TE RQ LL AIST   VE+AI++ IS NQ+  + E ELL
Sbjct: 258 PSGNLRISRGNKGTTFVLQKQTEARQKLLLAISTDKGVEEAIDKLISENQNENKFEEELL 317

Query: 281 EGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSST 340
           EG W MLWSSQMETDSWIENA NGLMG Q++ KNGQMKF VD+LLG +FSM GT  KS  
Sbjct: 318 EGGWNMLWSSQMETDSWIENAANGLMGMQVI-KNGQMKFGVDMLLGLRFSMIGTLVKSGD 376

Query: 341 NTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQ 399
           N Y+VTMDDAAII G FGYP+ ME++  LQLLY+D K+RI+RGYNNILFVH+R   S Q
Sbjct: 377 NAYDVTMDDAAIIGGPFGYPLGMESRFKLQLLYNDGKIRITRGYNNILFVHVRVAESKQ 435

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576885|ref|XP_003556560.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic-like [Glycine max]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/397 (67%), Positives = 316/397 (79%), Gaps = 23/397 (5%)

Query: 1   MALKFHITNVNFHF-CACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFT 59
           MALK  + N+ FH    CS    +      SSK+                    +Q++FT
Sbjct: 1   MALK--LVNLGFHSSIPCSPRPLKDRFVLRSSKV--------------------EQISFT 38

Query: 60  GEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTT 119
             EN LI+AL+GIQGRGRS+S +QLN VE AV+VLE L GVPDPT S+LIEGRWQL+FTT
Sbjct: 39  ESENSLIEALLGIQGRGRSSSRQQLNAVERAVQVLERLGGVPDPTKSNLIEGRWQLIFTT 98

Query: 120 RPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRI 179
           RPGTASPIQRTFVGV+ FSVFQE+ LRTNDPRV NIV FS+AIGELKVEAAASI+DGKRI
Sbjct: 99  RPGTASPIQRTFVGVDFFSVFQEVYLRTNDPRVCNIVSFSDAIGELKVEAAASIEDGKRI 158

Query: 180 LFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQ 239
           LF+FD+AAFSFKFLPFK PYPVPFRLLGDEAKGWLDTTYLS SGNLRISRGNKGTTFVLQ
Sbjct: 159 LFRFDRAAFSFKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSSSGNLRISRGNKGTTFVLQ 218

Query: 240 KKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIE 299
           K+TEPRQ LL+AIS+G  +++AI+E IS  Q+T +E+ EL EGEWQM+W+SQ  TDSWIE
Sbjct: 219 KQTEPRQRLLTAISSGKGIKEAIDELISLKQNTGQEDPELEEGEWQMMWNSQTVTDSWIE 278

Query: 300 NAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGY 359
           NA NGLMGKQI++KNG++KF VDILLG KFSM+G + K+ +  Y VTMDDAAII G FGY
Sbjct: 279 NAVNGLMGKQIIRKNGRIKFLVDILLGLKFSMSGNFVKTGSGVYGVTMDDAAIIGGPFGY 338

Query: 360 PIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDG 396
           P++++    L+LLYSD+K+R+SRG N+ILFVH+RTD 
Sbjct: 339 PLELKNNFILELLYSDEKLRVSRGNNSILFVHVRTDA 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847472|ref|XP_002891617.1| plastid-lipid associated protein pap [Arabidopsis lyrata subsp. lyrata] gi|297337459|gb|EFH67876.1| plastid-lipid associated protein pap [Arabidopsis lyrata subsp. lyrata]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/406 (65%), Positives = 327/406 (80%), Gaps = 13/406 (3%)

Query: 1   MALKFHITNVNFH-FCACSSSFS-------RSTLAFSSSKLSNCSQN-RTNGLVAQSS-- 49
           +AL+F+   ++    C C SS         R  L  ++SK  + S+N RT  +   SS  
Sbjct: 2   VALRFYTVEMSLPCLCQCPSSPISLSSSSPRYNLLNTTSKRLDSSRNCRTLRISCSSSST 61

Query: 50  LTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSL 108
           +TDQ QQ +F   E +LIDALIGIQGRG+SAS RQLNDV+ AVKVLEGL+G+ +PT S L
Sbjct: 62  VTDQTQQSSFNDAELKLIDALIGIQGRGKSASPRQLNDVDSAVKVLEGLEGIQNPTDSDL 121

Query: 109 IEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRT-NDPRVSNIVKFSEAIGELKV 167
           IEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+T NDPRVSNIVKFS+ IGELKV
Sbjct: 122 IEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKTTNDPRVSNIVKFSDFIGELKV 181

Query: 168 EAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRI 227
           EAAASIKDGKR+LF+FD+AAFS KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNLRI
Sbjct: 182 EAAASIKDGKRVLFRFDRAAFSLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNLRI 241

Query: 228 SRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQML 287
           SRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF+++N + AE++ ELLEG WQM+
Sbjct: 242 SRGNKGTTFVLQKETLPRQKLLATISQDKGVAEAIDEFLATNSNPAEDDYELLEGSWQMI 301

Query: 288 WSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTM 347
           WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM G + KS ++TYN+ M
Sbjct: 302 WSSQMFTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMKGKFIKSESSTYNLKM 361

Query: 348 DDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR 393
           DDAAII G FGYP+ +   I L++LY+D+K+RISRG++NI+FVH+R
Sbjct: 362 DDAAIIGGAFGYPVDITNNIELKILYTDEKLRISRGFDNIIFVHIR 407

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30694898|ref|NP_175522.2| putative plastid-lipid-associated protein 12 [Arabidopsis thaliana] gi|75154826|sp|Q8LAP6.1|PAP12_ARATH RecName: Full=Probable plastid-lipid-associated protein 12, chloroplastic; AltName: Full=Fibrillin-12; Flags: Precursor gi|21593276|gb|AAM65225.1| unknown [Arabidopsis thaliana] gi|26452116|dbj|BAC43147.1| unknown protein [Arabidopsis thaliana] gi|28950975|gb|AAO63411.1| At1g51115 [Arabidopsis thaliana] gi|332194502|gb|AEE32623.1| putative plastid-lipid-associated protein 12 [Arabidopsis thaliana]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 257/408 (62%), Positives = 322/408 (78%), Gaps = 17/408 (4%)

Query: 1   MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLS-------------NCSQNRTNGLVAQ 47
           +A++F+   ++   C C    S  +L+  S + +             NC   R +   + 
Sbjct: 2   VAVRFYAVEMSLP-CLCPCPSSPISLSLCSPRFNLLNTTSRRLGLSRNCRTLRIS-CSSS 59

Query: 48  SSLTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS 106
           S++TDQ QQ +F   E +LIDALIGIQGRG+SAS +QLNDVE AVKVLEGL+G+ +PT S
Sbjct: 60  STVTDQTQQSSFNDAELKLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDS 119

Query: 107 SLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLR-TNDPRVSNIVKFSEAIGEL 165
            LIEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+ TNDPRVSNIVKFS+ IGEL
Sbjct: 120 DLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGEL 179

Query: 166 KVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNL 225
           KVEA ASIKDGKR+LF+FD+AAF  KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNL
Sbjct: 180 KVEAVASIKDGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNL 239

Query: 226 RISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQ 285
           RISRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF++SN ++AE+  ELLEG WQ
Sbjct: 240 RISRGNKGTTFVLQKETVPRQKLLATISQDKGVAEAIDEFLASNSNSAEDNYELLEGSWQ 299

Query: 286 MLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNV 345
           M+WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM G + KS ++TY++
Sbjct: 300 MIWSSQMYTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMKGKFIKSESSTYDL 359

Query: 346 TMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR 393
            MDDAAII G FGYP+ +   I L++LY+D+KMRISRG++NI+FVH+R
Sbjct: 360 KMDDAAIIGGAFGYPVDITNNIELKILYTDEKMRISRGFDNIIFVHIR 407

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646338|gb|ACU23652.1| unknown [Glycine max]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/343 (72%), Positives = 297/343 (86%)

Query: 54  QQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRW 113
           +Q++FT  EN LI+AL+GIQGRGRS+S +QLN VE AV+VLE L GVPDPT S+LIEGRW
Sbjct: 33  EQISFTESENSLIEALLGIQGRGRSSSRQQLNAVERAVQVLERLGGVPDPTKSNLIEGRW 92

Query: 114 QLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASI 173
           QL+FTTRPGTASPIQRTFVGV+ FSVFQE+ LRTNDPRV NIV FS+AIGELKVEAAASI
Sbjct: 93  QLIFTTRPGTASPIQRTFVGVDFFSVFQEVYLRTNDPRVCNIVSFSDAIGELKVEAAASI 152

Query: 174 KDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKG 233
           +DGKRI F+F++AAFSFKFLPFK PYPVPFRLLGDEAKG LDTTYLS SGNLRISRGNKG
Sbjct: 153 EDGKRIHFRFNRAAFSFKFLPFKVPYPVPFRLLGDEAKGRLDTTYLSSSGNLRISRGNKG 212

Query: 234 TTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQME 293
           TTF LQK+TEPRQ LL+AIS+G  +++AI+E IS  Q+T +E+ EL EGEWQM+W+SQ  
Sbjct: 213 TTFALQKQTEPRQRLLTAISSGKGIKEAIDELISLKQNTGQEDPELEEGEWQMMWNSQTV 272

Query: 294 TDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAII 353
           TDSWIENA NGLMGKQI++KNG++KF VDILLG KFSM+G + K+ +  Y VTMDDAAII
Sbjct: 273 TDSWIENAVNGLMGKQIIRKNGRIKFLVDILLGLKFSMSGNFVKTGSGVYGVTMDDAAII 332

Query: 354 CGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDG 396
            G FGYP++++    L+LLYSD+K+R+SRG N+ILFVH+RTD 
Sbjct: 333 GGPFGYPLELKNNFILELLYSDEKLRVSRGNNSILFVHVRTDA 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509688|gb|AFK42910.1| unknown [Lotus japonicus]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 262/399 (65%), Positives = 305/399 (76%), Gaps = 26/399 (6%)

Query: 1   MALKFHITNVNFH----FCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQL 56
           MALK  + N+ FH       CSSS  R       S +  CSQ               +Q+
Sbjct: 1   MALK--LVNLGFHPFTLTPPCSSSKPRQC-----SFVFRCSQ--------------VEQI 39

Query: 57  AFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLM 116
           +    E  LI+A++G QGRGRS+S  QLN +E A++VLE L GVPDPT S+LIEGRWQL 
Sbjct: 40  SIAESEYSLIEAILGTQGRGRSSSPNQLNAIERAIQVLERLGGVPDPTNSNLIEGRWQLA 99

Query: 117 FTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDG 176
           FTTRPGTASPIQRTFVGV+ FSVFQEISLRTNDPRV NIV FS+AIGELKVEAAASI+DG
Sbjct: 100 FTTRPGTASPIQRTFVGVDFFSVFQEISLRTNDPRVGNIVSFSDAIGELKVEAAASIEDG 159

Query: 177 KRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTF 236
           KRILF+FD+AAFSFKFLPFK PYPVPF+LLGDEAKGWLDTTYLS SGNLRIS+GNKGTTF
Sbjct: 160 KRILFRFDRAAFSFKFLPFKVPYPVPFKLLGDEAKGWLDTTYLSHSGNLRISKGNKGTTF 219

Query: 237 VLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDS 296
           VLQK+TEPRQ LL+AIS+G  V++AI+E IS  ++T EE       EWQM+W+SQ  TDS
Sbjct: 220 VLQKQTEPRQRLLTAISSGKGVKEAIDELISLKKNTGEEPELEEG-EWQMIWNSQSVTDS 278

Query: 297 WIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGG 356
           W+ENA NGLMGKQI+ KNGQ+KF VDILLG KFSMTG + K  +  Y VTMDDAAII G 
Sbjct: 279 WLENAANGLMGKQIIGKNGQIKFLVDILLGLKFSMTGNFIKIGSKMYEVTMDDAAIIGGA 338

Query: 357 FGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTD 395
           FG P+ ME K  L+LL+SD K+RISRGYN +LFVH+R+D
Sbjct: 339 FGLPLNMENKFVLELLFSDKKVRISRGYNEVLFVHIRSD 377

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445071|ref|XP_003592813.1| hypothetical protein MTR_1g116320 [Medicago truncatula] gi|355481861|gb|AES63064.1| hypothetical protein MTR_1g116320 [Medicago truncatula]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/401 (64%), Positives = 312/401 (77%), Gaps = 19/401 (4%)

Query: 1   MALKFHITNVN---FHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLA 57
           MAL   + NVN   F  C+  S+F               S N +N     +  +  +Q++
Sbjct: 1   MALTLRVVNVNSIGFESCSRCSTF--------------ISPNPSNSRFVSAGCSKVEQIS 46

Query: 58  FTGEE--NQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQL 115
              EE  N LI AL+GIQGRGRS+S +QLN +E A++VLE + GV DPT SSLIEGRWQL
Sbjct: 47  IVTEESENSLIQALVGIQGRGRSSSPQQLNAIERAIQVLEHIGGVSDPTNSSLIEGRWQL 106

Query: 116 MFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKD 175
           +FTTRPGTASPIQRTFVGV+ FSVFQE+ L+TNDPRV+NIV FS+AIGELKVEAAASI D
Sbjct: 107 IFTTRPGTASPIQRTFVGVDFFSVFQEVYLQTNDPRVTNIVSFSDAIGELKVEAAASIGD 166

Query: 176 GKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTT 235
           GKRILF+FD+AAFSFKFLPFK PYPVPF+LLGDEAKGWLDTTYLS SGNLRISRGNKGTT
Sbjct: 167 GKRILFRFDRAAFSFKFLPFKVPYPVPFKLLGDEAKGWLDTTYLSHSGNLRISRGNKGTT 226

Query: 236 FVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETD 295
           FVLQK+TEPRQ LL+AIS+G  V +AI++ IS N+++ EE+ EL EGEWQM+W+SQ  TD
Sbjct: 227 FVLQKQTEPRQKLLTAISSGVGVREAIDKLISLNKNSGEEDPELEEGEWQMIWNSQTVTD 286

Query: 296 SWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICG 355
           SW+ENA NGLMGKQIV+KNG++K+ V+ILLG KFSM+G + KSS   Y VTMDDAAII G
Sbjct: 287 SWLENAANGLMGKQIVEKNGRIKYVVNILLGLKFSMSGIFVKSSPKVYEVTMDDAAIIGG 346

Query: 356 GFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDG 396
            FGYP++   K  L++L++D K+RISRG N I+FVH RT+ 
Sbjct: 347 PFGYPLEFGKKFILEILFNDGKVRISRGDNEIIFVHARTNA 387

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
TAIR|locus:2026052	409	AT1G51110 [Arabidopsis thalian	0.895	0.875	0.675	4e-129
TAIR|locus:2132006	310	AT4G22240 [Arabidopsis thalian	0.402	0.519	0.235	1.9e-09
UNIPROTKB|P80471	326	P80471 "Light-induced protein,	0.107	0.131	0.466	1.7e-07
UNIPROTKB|O99019	326	O99019 "Light-induced protein,	0.357	0.438	0.259	6e-07
TAIR|locus:2136627	318	FIB "fibrillin" [Arabidopsis t	0.1	0.125	0.476	4.1e-06
TAIR|locus:2178133	273	AT5G09820 [Arabidopsis thalian	0.462	0.677	0.248	2.6e-05
TAIR|locus:2092150	242	AT3G26070 [Arabidopsis thalian	0.247	0.409	0.256	0.00014

TAIR|locus:2026052 AT1G51110 [Arabidopsis thaliana (taxid:3702)]

 Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
 Identities = 244/361 (67%), Positives = 298/361 (82%)

Query:    35 NCSQNRTNGLVAQSSLTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKV 93
             NC   R +   + S++TDQ QQ +F   E +LIDALIGIQGRG+SAS +QLNDVE AVKV
Sbjct:    48 NCRTLRIS-CSSSSTVTDQTQQSSFNDAELKLIDALIGIQGRGKSASPKQLNDVESAVKV 106

Query:    94 LEGLQGVPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLR-TNDPRV 152
             LEGL+G+ +PT S LIEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+ TNDPRV
Sbjct:   107 LEGLEGIQNPTDSDLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRV 166

Query:   153 SNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKG 212
             SNIVKFS+ IGELKVEA ASIKDGKR+LF+FD+AAF  KFLPFK PYPVPFRLLGDEAKG
Sbjct:   167 SNIVKFSDFIGELKVEAVASIKDGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKG 226

Query:   213 WLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQST 272
             WLDTTYLSPSGNLRISRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF++SN ++
Sbjct:   227 WLDTTYLSPSGNLRISRGNKGTTFVLQKETVPRQKLLATISQDKGVAEAIDEFLASNSNS 286

Query:   273 AXXXXXXXXXXWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMT 332
             A          WQM+WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM 
Sbjct:   287 AEDNYELLEGSWQMIWSSQMYTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMK 346

Query:   333 GTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHL 392
             G + KS ++TY++ MDDAAII G FGYP+ +   I L++LY+D+KMRISRG++NI+FVH+
Sbjct:   347 GKFIKSESSTYDLKMDDAAIIGGAFGYPVDITNNIELKILYTDEKMRISRGFDNIIFVHI 406

Query:   393 R 393
             R
Sbjct:   407 R 407

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

TAIR|locus:2132006 AT4G22240 [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
 Identities = 40/170 (23%), Positives = 75/170 (44%)

Query:    44 LVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDP 103
             L A+ ++ D ++      +  L+D+L G   RG SAS+    ++   +  LE     P P
Sbjct:    71 LAAEEAIEDVEETERL--KRSLVDSLYGTD-RGLSASSETRAEIGDLITQLESKNPTPAP 127

Query:   104 TGSS-LIEGRWQLMFTTRPGTASPIQRTFVG-VETFSVFQEISLRTNDPRVSNIVKFSEA 161
             T +  L+ G+W L +T+       + R  V  ++   + Q I   +++  V N V+F+  
Sbjct:   128 TEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTID--SDNFTVQNSVRFAGP 185

Query:   162 IG--ELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDE 209
             +G   +   A   I+  KR+  +F++       L      P    +LG +
Sbjct:   186 LGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQK 235

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

UNIPROTKB|P80471 P80471 "Light-induced protein, chloroplastic" [Solanum tuberosum (taxid:4113)]

 Score = 97 (39.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
 Identities = 21/45 (46%), Positives = 28/45 (62%)

Query:   200 PVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
             P+ F +  + A+ WL TTYL     LRISRG+ G+ FVL K+  P
Sbjct:   280 PIKFPITNNNAQSWLLTTYLDDE--LRISRGDAGSVFVLIKEGSP 322

GO:0003674 "molecular_function" evidence=ND

GO:0006950 "response to stress" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

UNIPROTKB|O99019 O99019 "Light-induced protein, chloroplastic" [Solanum demissum (taxid:50514)]

 Score = 93 (37.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
 Identities = 40/154 (25%), Positives = 64/154 (41%)

Query:    62 ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR 120
             + QL D+L G   RG SAS+    ++   +  LE     P PT + +L+ G+W L +T+ 
Sbjct:   103 KKQLADSLYGTN-RGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSF 161

Query:   121 PGTASPIQR---TFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAAS--IKD 175
              G    + R     V VE  S  Q I   +    V N V F+  +    +   A   ++ 
Sbjct:   162 SGLFPLLSRGNLPLVRVEEIS--QTID--SESFTVQNSVVFAGPLATTSISTNAKFEVRS 217

Query:   176 GKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDE 209
              KR+  +F++       L      P     LG +
Sbjct:   218 PKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQK 251

GO:0003674 "molecular_function" evidence=ND

GO:0006950 "response to stress" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=ISS

TAIR|locus:2136627 FIB "fibrillin" [Arabidopsis thaliana (taxid:3702)]

 Score = 89 (36.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query:   200 PVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
             P+ F L  D  + WL TTYL    +LRISRG+ G+ +VL K+
Sbjct:   272 PLKFSLPSDNTQSWLLTTYLDK--DLRISRGDGGSVYVLIKE 311

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010205 "photoinhibition" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2178133 AT5G09820 [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 51/205 (24%), Positives = 97/205 (47%)

Query:    52 DQQQLAFTGEENQLIDALIGIQGRGR-SASARQLNDVECAVKVLEGLQGVPDPTGS-SLI 109
             +Q+++  +  + +L +AL GI  RG     + +  ++E  VK+LE     P+PTG    I
Sbjct:    77 EQEEITVSHIKEELYEALKGIN-RGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKI 135

Query:   110 EGRWQLMFTTRPGTASPIQRTFVGVETF----SVFQEISLRTNDPRVSNIVKFS-EAI-- 162
              G W+L+++T     S  +RT +G+  F     + Q+I +     +  +++KF    +  
Sbjct:   136 GGCWKLIYSTITVLGS--KRTKLGLRDFVSLGDLLQQIDIAQG--KTVHVLKFDVRGLNL 191

Query:   163 --GELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGD-EAKGWLDTTYL 219
               GE ++ A+  I     +   ++ +      L   F   +   LLG    +G  + +YL
Sbjct:   192 LDGEFRIVASFKISSKSSVEITYESSTIKPDQLMNIFRKNMDL-LLGIFNPEGLFEISYL 250

Query:   220 SPSGNLRISRGNKGTTFVLQKKTEP 244
                 +L++ R  KG  FVL++  +P
Sbjct:   251 DE--DLQVGRDGKGNVFVLERIEKP 273

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

TAIR|locus:2092150 AT3G26070 [Arabidopsis thaliana (taxid:3702)]

 Score = 81 (33.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 28/109 (25%), Positives = 57/109 (52%)

Query:    62 ENQLIDALIGIQGRGRSASAR-QLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTR 120
             + +L++A+  ++ RG +AS   QL   + A KV E +    +P  S L+ G+W+L++TT 
Sbjct:    75 KQELLEAIEPLE-RGATASPDDQLRIDQLARKV-EAVNPTKEPLKSDLVNGKWELIYTTS 132

Query:   121 PGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVK---FSEAIGELK 166
                    +  F+   + + +Q I++ T   +V N+     ++   G++K
Sbjct:   133 ASILQAKKPRFL--RSITNYQSINVDTL--KVQNMETWPFYNSVTGDIK 177

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LAP6	PAP12_ARATH	No assigned EC number	0.6299	0.9775	0.9559	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	400
pfam04755	196	pfam04755, PAP_fibrillin, PAP_fibrillin	2e-48

>gnl|CDD|218245 pfam04755, PAP_fibrillin, PAP_fibrillin

 Score =  162 bits (412), Expect = 2e-48
 Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 25/195 (12%)

Query: 64  QLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTRPG 122
           +L+DA+ G   RG  AS+    ++E AV  LE L   P PT S  L+ G+W+L++TT   
Sbjct: 6   KLLDAIYGTN-RGLRASSDDRAEIESAVTQLEALNPTPAPTESLDLLNGKWRLLYTTSKE 64

Query: 123 TASPIQRTFVG-VETFSVFQEISLRTNDPRVSNIVKFSE--AIGELKVEAAASIKDGKRI 179
               + R  +  ++   ++Q I    N+  V N V FS   A G   V A   I+  KR+
Sbjct: 65  LLPLLARGRLPLLKVGQIYQTI--DVNNLTVYNSVTFSGPLAEGSFSVRAKFEIRSPKRV 122

Query: 180 LFQFDKAAFSFKFLPFKF----------------PYPVPFRLLGDEAKGWLDTTYLSPSG 223
             +F++       L                      P+PF L GD AKGWL+TTYL    
Sbjct: 123 QIRFERGVLGTPQLLKGSLTPLQDTASNIRGISSQLPLPFPLSGDRAKGWLETTYLDE-- 180

Query: 224 NLRISRGNKGTTFVL 238
           +LRISRG+ G+ FVL
Sbjct: 181 DLRISRGDGGSLFVL 195

This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins. Length = 196

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	400
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	100.0
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	99.97

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=100.00  E-value=1.9e-37  Score=287.11  Aligned_cols=176  Identities=40%  Similarity=0.681  Sum_probs=152.3

Q ss_pred             hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHhcCCCCCCCCC-CCcceEEEEEEecCCCCCCccccc-ccCcee
Q 015769           59 TGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTRPGTASPIQRT-FVGVET  136 (400)
Q Consensus        59 ~~~K~~LL~al~~t~~rG~~as~~~r~~I~~lI~~LEalnpt~~P~~s-~lL~G~W~LvyTt~~~t~sp~~r~-~~Gv~~  136 (400)
                      .++|++||++++++ +||..++++++++|+++|++||++||+++|+++ ++|+|+|+|+|||++++.+.+++. .+++..
T Consensus         1 ~~~K~~Ll~~~~~~-~rG~~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~~~~~~l~~~~~~~~~~   79 (198)
T PF04755_consen    1 QDLKQELLQAVAGT-NRGLRASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSPEIRSLLQRGRLPGVRV   79 (198)
T ss_pred             ChHHHHHHHHHhcc-CCCccCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCCCccccccccccccccc
Confidence            36899999999999 899999999999999999999999999999998 999999999999999988776653 456777


Q ss_pred             eeeeEEEEEeCCCCcEEEEEEEec---cceeEEEEEEEEEecCCEEEEEEEeeeeeeccc-----------------ccc
Q 015769          137 FSVFQEISLRTNDPRVSNIVKFSE---AIGELKVEAAASIKDGKRILFQFDKAAFSFKFL-----------------PFK  196 (400)
Q Consensus       137 ~~v~Q~i~ld~~~~~v~N~V~f~~---~~g~l~V~a~~~~~~~~rv~v~F~~~~l~~~~~-----------------~f~  196 (400)
                      +++||.|+  .+++++.|+|+|..   ..|.+.+.+.+++.++.|+.++|+++.+.++..                 ...
T Consensus        80 ~~v~Q~id--~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~l~~~l~~~~~~~~~v~~~~~  157 (198)
T PF04755_consen   80 GRVFQTID--ADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSLLKGVLGPLKDALNNVPRGIS  157 (198)
T ss_pred             cceEEEEE--CCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccceeeccchhhhhhhhhcccccc
Confidence            89999984  56799999999765   357899999999999999999999998865211                 112


Q ss_pred             cCCCccccccCCCcceEEEEEEecCCCceEEEeCCCCcEEEEe
Q 015769          197 FPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQ  239 (400)
Q Consensus       197 ~p~P~~f~l~g~~~~Gwld~tYLD~~~dlRIsRG~kG~~FVl~  239 (400)
                      ..+|+++++.+..++|||||||||+  ||||+||++|++|||.
T Consensus       158 ~~~~~~~~~~~~~~~g~l~~tYLDe--dlRI~Rg~~G~~fVl~  198 (198)
T PF04755_consen  158 DELPVPLPLPGGSPKGWLDTTYLDE--DLRISRGNKGSLFVLK  198 (198)
T ss_pred             cccccccccCCCCCceEEEEEEECC--CeEEEEcCCCCEEEeC
Confidence            2355666666678999999999999  9999999999999984

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=99.97  E-value=3.8e-31  Score=244.92  Aligned_cols=150  Identities=24%  Similarity=0.348  Sum_probs=122.2

Q ss_pred             CcccchhhhccCc-----------hHHHHHHHHHHHcCCCCCcccc-cccceeEEEEEecccCchhhhhhh-cCCCC---
Q 015769          243 EPRQTLLSAISTG-----------TQVEQAINEFISSNQSTAEEER-ELLEGEWQMLWSSQMETDSWIENA-GNGLM---  306 (400)
Q Consensus       243 ~~~q~ll~ai~~~-----------~~i~~~i~~Le~~np~~~p~~~-~lL~G~W~L~yts~~e~~~~l~~~-~~gl~---  306 (400)
                      +.+++||++++..           .+|.++|++||++||++.|.++ ++|+|+|+|+|||+.+..+.+..- ..+..   
T Consensus         2 ~~K~~Ll~~~~~~~rG~~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~~~~~~l~~~~~~~~~~~~   81 (198)
T PF04755_consen    2 DLKQELLQAVAGTNRGLRASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSPEIRSLLQRGRLPGVRVGR   81 (198)
T ss_pred             hHHHHHHHHHhccCCCccCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCCCccccccccccccccccc
Confidence            3467888888742           4799999999999999999765 999999999999999887665431 11221   


Q ss_pred             CeeEEc-cCCceEEEEEecc--C--eEEEEEEEEEEeCCcEEEEEEeecEEEe-------------------------cc
Q 015769          307 GKQIVK-KNGQMKFEVDILL--G--FKFSMTGTYAKSSTNTYNVTMDDAAIIC-------------------------GG  356 (400)
Q Consensus       307 ~~Q~Id-~~~~~~N~v~~~~--~--~~~~~~a~~~~~s~~rv~V~F~~~~i~~-------------------------~~  356 (400)
                      .||+|| +++++.|+|++.+  .  +.+.+.|++++.+++|+.|+|+++.+..                         .+
T Consensus        82 v~Q~id~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~l~~~l~~~~~~~~~v~~~~~~~~~  161 (198)
T PF04755_consen   82 VFQTIDADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSLLKGVLGPLKDALNNVPRGISDELP  161 (198)
T ss_pred             eEEEEECCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccceeeccchhhhhhhhhcccccccccc
Confidence            399999 8999999999743  2  5688999999999999999999998843                         12


Q ss_pred             cccccC-CCceeEEEEEEeeCceeEEeCCCCeEEEEE
Q 015769          357 FGYPIK-METKINLQLLYSDDKMRISRGYNNILFVHL  392 (400)
Q Consensus       357 ~~~p~~-~~~~gwlditYLD~~lRI~RG~~G~~FVl~  392 (400)
                      +.++++ ..++||||||||||+|||+||++|++|||.
T Consensus       162 ~~~~~~~~~~~g~l~~tYLDedlRI~Rg~~G~~fVl~  198 (198)
T PF04755_consen  162 VPLPLPGGSPKGWLDTTYLDEDLRISRGNKGSLFVLK  198 (198)
T ss_pred             cccccCCCCCceEEEEEEECCCeEEEEcCCCCEEEeC
Confidence            223333 357899999999999999999999999984

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	400
4gzv_A	142	Hypothetical protein; AN eight-stranded beta barre	84.59

>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}

Probab=84.59  E-value=8  Score=33.39  Aligned_cols=71  Identities=15%  Similarity=0.209  Sum_probs=46.6

Q ss_pred             cccccceeEEEE-EecccCchhhhhhhcCCCCCeeEEccCCceEEEEEeccC-eEEEEEEEEEEeCCcEEEEEEee
Q 015769          276 ERELLEGEWQML-WSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLG-FKFSMTGTYAKSSTNTYNVTMDD  349 (400)
Q Consensus       276 ~~~lL~G~W~L~-yts~~e~~~~l~~~~~gl~~~Q~Id~~~~~~N~v~~~~~-~~~~~~a~~~~~s~~rv~V~F~~  349 (400)
                      .+.-|.|.|+|. |.++......--+.   ...+=||.+++++.|++-.... ......++|+..|+..+.=..++
T Consensus         8 ~~~~L~GvWQ~c~y~~~~~~~~~~l~~---s~~~KIlS~DgtF~N~~m~~~~~aiIt~yGtY~l~SD~~Y~E~i~k   80 (142)
T 4gzv_A            8 KAADLKGIWQLCHYVSESPDVPGALKP---SNTFKVLSDDGRIVNFTIIPGADAIITGYGTYKQLTDDSYKESIEK   80 (142)
T ss_dssp             GSCCCCEEEEEEEEEESSTTSCCEEEE---EEEEEEECTTSEEEEEECCTTSCCEEEEEEEEEEEETTEEEEEEEE
T ss_pred             ccccceEEeEEeeEeecCCCCCceEee---cCceEEECCCCcEEEEEEeCCCCcEEEEeEEEEecCCCeeeeeecc
Confidence            456799999987 55554332211011   1137889899999999865433 33577999999998876544443

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00