Citrus Sinensis ID: 015777
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | 2.2.26 [Sep-21-2011] | |||||||
| O82616 | 324 | Putative fructokinase-5 O | no | no | 0.772 | 0.953 | 0.635 | 1e-116 | |
| Q9LNE3 | 329 | Probable fructokinase-2 O | no | no | 0.765 | 0.930 | 0.628 | 1e-116 | |
| Q0J8G4 | 336 | Fructokinase-2 OS=Oryza s | no | no | 0.797 | 0.949 | 0.620 | 1e-116 | |
| A2YQL4 | 336 | Fructokinase-2 OS=Oryza s | N/A | no | 0.797 | 0.949 | 0.620 | 1e-116 | |
| Q9M1B9 | 326 | Probable fructokinase-4 O | no | no | 0.782 | 0.960 | 0.612 | 1e-115 | |
| Q9LNE4 | 345 | Probable fructokinase-3 O | no | no | 0.777 | 0.901 | 0.613 | 1e-114 | |
| Q42896 | 328 | Fructokinase-2 OS=Solanum | N/A | no | 0.785 | 0.957 | 0.601 | 1e-113 | |
| Q7XJ81 | 328 | Fructokinase-2 OS=Solanum | N/A | no | 0.785 | 0.957 | 0.601 | 1e-112 | |
| Q9SID0 | 325 | Probable fructokinase-1 O | no | no | 0.775 | 0.953 | 0.606 | 1e-112 | |
| Q0JGZ6 | 323 | Fructokinase-1 OS=Oryza s | no | no | 0.795 | 0.984 | 0.597 | 1e-112 |
| >sp|O82616|SCRK5_ARATH Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/329 (63%), Positives = 246/329 (74%), Gaps = 20/329 (6%)
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
+PL+V FGEMLIDFVP SG+SLAES F KAPGGAPANVA I +LGG SAFIGK
Sbjct: 3 NTPLIVSFGEMLIDFVPDTSGVSLAESTGFLKAPGGAPANVACAITKLGGKSAFIGK--- 59
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
G DEFG+ML +ILK+N VN G+ FD ARTALAFVTL+ DGE
Sbjct: 60 ----------------FGDDEFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGE 103
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 238
REFMFYRNPSADMLL+E+EL+ LI KAKIFHYGSISLI+EPC++AH+AA K AKDAGV+
Sbjct: 104 REFMFYRNPSADMLLKESELNKDLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVL 163
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298
LSYDPN+RLPLWPS + A EGI SIW ADIIK+S++E++FLT+G+ DD VV L H
Sbjct: 164 LSYDPNVRLPLWPSTEAAIEGIKSIWNEADIIKVSDDEVTFLTRGDAEKDD-VVLSLMHD 222
Query: 299 NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKE 358
LKLL+VT+G GCRYYTK F GRV G V+AVD TGAGD+FV L L D S+L E
Sbjct: 223 KLKLLIVTDGEKGCRYYTKKFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDE 282
Query: 359 DQLRDALRFANACGALTVMERGAIPALPT 387
+L++AL FANACGA+ ++GAIPALPT
Sbjct: 283 GKLKEALAFANACGAVCTTQKGAIPALPT 311
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4 |
| >sp|Q9LNE3|SCRK2_ARATH Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/326 (62%), Positives = 251/326 (76%), Gaps = 20/326 (6%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCF 121
LVV FGEMLIDFVPT SG+SL+ES F KAPGGAPANVA+ ++RLGG +AF+GK
Sbjct: 11 LVVSFGEMLIDFVPTESGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAAFVGK------ 64
Query: 122 YEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREF 181
+G DEFG+MLA IL++N+V+ G+ FD GARTALAFVTLRSDGEREF
Sbjct: 65 -------------LGDDEFGHMLAGILRKNDVDDQGINFDKGARTALAFVTLRSDGEREF 111
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241
MFYRNPSADMLL+ EL+L LI AK+FHYGSISLITEPC+SAH+ A + AK+AG +LSY
Sbjct: 112 MFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSY 171
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
DPNLR PLWPS ++AR+ I+SIW+ ADIIK+S+ E+ FLT G DD L+H NLK
Sbjct: 172 DPNLREPLWPSPEEARKQIMSIWDKADIIKVSDVELEFLT-GNKTIDDETAMSLWHPNLK 230
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
LLLVT G +GCRYYTKDF G V+ V+AVD TGAGD+FV +L+Q+ D S+L++E++L
Sbjct: 231 LLLVTLGENGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERL 290
Query: 362 RDALRFANACGALTVMERGAIPALPT 387
R LRFANACGA+T ++GAIPALPT
Sbjct: 291 RKVLRFANACGAITTTKKGAIPALPT 316
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q0J8G4|SCRK2_ORYSJ Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/340 (62%), Positives = 252/340 (74%), Gaps = 21/340 (6%)
Query: 48 GDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLG 107
GDG + E LVV FGEMLIDFVP V+G+SLAES F KAPGGAPANVA I++LG
Sbjct: 5 GDG-AAAAAAAEPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLG 63
Query: 108 GSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTA 167
GSSAF+GK G DEFG+ML DILK+N VN G FD ARTA
Sbjct: 64 GSSAFVGK-------------------FGDDEFGHMLVDILKKNGVNAEGCLFDEHARTA 104
Query: 168 LAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIA 227
LAFVTL+S+GEREFMFYRNPSADMLL EAEL+L LI +AKIFHYGSISLITEPC+SAH+A
Sbjct: 105 LAFVTLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVA 164
Query: 228 AAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287
A +AAK AG++ SYDPN+RLPLWPS D AR GILSIW+ AD IK+S++E++FLTQG D
Sbjct: 165 AMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQG-DAN 223
Query: 288 DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347
D+ V L+ LKLL+VT+G GCRY+TKDF G V G V VD TGAGDAFV +L
Sbjct: 224 DEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVN 283
Query: 348 LSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 387
++ D S+ E++LR+AL+F+NACGA+ ++GAIPALPT
Sbjct: 284 VAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPT 323
|
May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|A2YQL4|SCRK2_ORYSI Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/340 (62%), Positives = 252/340 (74%), Gaps = 21/340 (6%)
Query: 48 GDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLG 107
GDG + E LVV FGEMLIDFVP V+G+SLAES F KAPGGAPANVA I++LG
Sbjct: 5 GDG-AAAAAAAEPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLG 63
Query: 108 GSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTA 167
GSSAF+GK G DEFG+ML DILK+N VN G FD ARTA
Sbjct: 64 GSSAFVGK-------------------FGDDEFGHMLVDILKKNGVNAEGCLFDEHARTA 104
Query: 168 LAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIA 227
LAFVTL+S+GEREFMFYRNPSADMLL EAEL+L LI +AKIFHYGSISLITEPC+SAH+A
Sbjct: 105 LAFVTLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVA 164
Query: 228 AAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287
A +AAK AG++ SYDPN+RLPLWPS D AR GILSIW+ AD IK+S++E++FLTQG D
Sbjct: 165 AMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQG-DAN 223
Query: 288 DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347
D+ V L+ LKLL+VT+G GCRY+TKDF G V G V VD TGAGDAFV +L
Sbjct: 224 DEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVN 283
Query: 348 LSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 387
++ D S+ E++LR+AL+F+NACGA+ ++GAIPALPT
Sbjct: 284 VAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPT 323
|
May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9M1B9|SCRK4_ARATH Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/333 (61%), Positives = 251/333 (75%), Gaps = 20/333 (6%)
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
E L+V FGEMLIDFVPTVSG+SLA++P F KAPGGAPANVA+ I+RLGG +AF+GK
Sbjct: 7 EKSLIVSFGEMLIDFVPTVSGVSLADAPGFIKAPGGAPANVAIAISRLGGRAAFVGK--- 63
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
+G DEFG+MLA ILK+N V+ G+ FD GARTALAFVTLRSDGE
Sbjct: 64 ----------------LGDDEFGHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGE 107
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 238
REFMFYRNPSADMLL+ EL+L +I AK+FHYGSISLI EPC+SAH+ A + AK+AG +
Sbjct: 108 REFMFYRNPSADMLLRPDELNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGAL 167
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298
LSYDPNLRLPLWPS ++A++ ILSIW+ A++IK+S+EE+ FLT G D DD L+H+
Sbjct: 168 LSYDPNLRLPLWPSKEEAQKQILSIWDKAEVIKVSDEELMFLT-GSDKVDDETALSLWHS 226
Query: 299 NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKE 358
NLKLLLVT G GCRYYTK F G V V+AVD TGAGD+FV +L ++ D ++L+ E
Sbjct: 227 NLKLLLVTLGEKGCRYYTKSFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDE 286
Query: 359 DQLRDALRFANACGALTVMERGAIPALPTREAV 391
+LR+ LR ANACGA+T ++GAIPALPT V
Sbjct: 287 ARLREVLRLANACGAITTTKKGAIPALPTESEV 319
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9LNE4|SCRK3_ARATH Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/331 (61%), Positives = 248/331 (74%), Gaps = 20/331 (6%)
Query: 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKT 116
T E L+V FGEMLIDFVPTVSG+SL+ESP F KAPGGAPANVA+ ++RLGG +AF+GK
Sbjct: 5 TGEKGLIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGK- 63
Query: 117 TLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSD 176
+G D+FG+MLA IL++N V+ G+ FD GARTALAFVTLRSD
Sbjct: 64 ------------------LGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSD 105
Query: 177 GEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 236
GEREFMFYRNPSADMLL+ EL+L LI AK+FHYGSISLITEPC+SAH+ A + AK+AG
Sbjct: 106 GEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAG 165
Query: 237 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296
+LSYDPNLR PLWPS ++AR I+SIW+ ADIIK+S+ E+ FLT+ + DD L+
Sbjct: 166 ALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENK-TMDDKTAMSLW 224
Query: 297 HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQ 356
H NLKLLLVT G GC Y+TK F G V+ V+AVD TGAGD+FV +L Q+ D S+L+
Sbjct: 225 HPNLKLLLVTLGEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLE 284
Query: 357 KEDQLRDALRFANACGALTVMERGAIPALPT 387
E +LR LRFANACGA+T ++GAIPALPT
Sbjct: 285 DEARLRKVLRFANACGAITTTKKGAIPALPT 315
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q42896|SCRK2_SOLLC Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/334 (60%), Positives = 247/334 (73%), Gaps = 20/334 (5%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
S L+V FGEMLIDFVPTVSG+SLAE+P F KAPGGAPANVA+ + RLGG SAF+GK
Sbjct: 9 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGK---- 64
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER 179
+G DEFG+MLA ILK N V G+ FD GARTALAFVTLR+DGER
Sbjct: 65 ---------------LGDDEFGHMLAGILKTNGVQAEGINFDKGARTALAFVTLRADGER 109
Query: 180 EFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 239
EFMFYRNPSADMLL AEL+L LI AK+FHYGSISLI EPC++AH+ A + AK+AG +L
Sbjct: 110 EFMFYRNPSADMLLTPAELNLDLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALL 169
Query: 240 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299
SYDPNLRLPLWPSA++A++ I SIW++AD+IK+S+ E+ FLT G + DD L+H N
Sbjct: 170 SYDPNLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFLT-GSNKIDDESAMSLWHPN 228
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
LKLLLVT G GC YYTK F G V G V+ VD TGAGD+FV +L+++ D ++L+ E
Sbjct: 229 LKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEA 288
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAVLN 393
+L++ LRF+ ACGA+T ++GAIPALPT L
Sbjct: 289 RLKEVLRFSCACGAITTTKKGAIPALPTASEALT 322
|
May play an important role in maintaining the flux of carbon towards starch formation. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q7XJ81|SCRK2_SOLHA Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/334 (60%), Positives = 246/334 (73%), Gaps = 20/334 (5%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
S L+V FGEMLIDFVPTVSG+SLAE+P F KAPGGAPANVA+ + RLGG SAF+GK
Sbjct: 9 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGRSAFVGK---- 64
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER 179
+G DEFG+MLA ILK N V G+ FD GARTALAFVTLR+DGER
Sbjct: 65 ---------------LGDDEFGHMLAGILKTNGVQADGINFDKGARTALAFVTLRADGER 109
Query: 180 EFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 239
EFMFYRNPSADMLL AEL+L LI AK+FHYGSISLI EPC++AH+ A + AK+AG +L
Sbjct: 110 EFMFYRNPSADMLLTPAELNLDLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALL 169
Query: 240 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299
SYDPNLRLPLWPSA++A++ I SIW++AD+IK+S+ E+ FLT G + DD L+H N
Sbjct: 170 SYDPNLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFLT-GSNKIDDESAMSLWHPN 228
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
LKLLLVT G GC YYTK F G V G V+ VD TGAGD+FV +L+++ D ++L E
Sbjct: 229 LKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILADEA 288
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAVLN 393
+L++ LRF+ ACGA+T ++GAIPALPT L
Sbjct: 289 RLKEVLRFSCACGAITTTKKGAIPALPTASEALT 322
|
May play an important role in maintaining the flux of carbon towards starch formation. Solanum habrochaites (taxid: 62890) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9SID0|SCRK1_ARATH Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/330 (60%), Positives = 246/330 (74%), Gaps = 20/330 (6%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCF 121
L+V FGEMLIDFVPT SG+SLAE+P F KAPGGAPANVA+ ++RLGG SAF+GK
Sbjct: 9 LIVSFGEMLIDFVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGK------ 62
Query: 122 YEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREF 181
+G DEFG+MLA IL++N V+ G+ FD GARTALAFVTLR+DG+REF
Sbjct: 63 -------------LGDDEFGHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREF 109
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241
MFYRNPSADMLL+ EL+L LI AK+FHYGSISLI EPC+SAH+ A + AK+AG +LSY
Sbjct: 110 MFYRNPSADMLLRPDELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSY 169
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
DPNLR PLWPS ++A+ I+SIW+ A+IIK+S+ E+ FLT G + DD L+H NLK
Sbjct: 170 DPNLREPLWPSKEEAKTQIMSIWDKAEIIKVSDVELEFLT-GSNKIDDETALTLWHPNLK 228
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
LLLVT G GCRYYTK F G V V AVD TGAGD+FV +L+Q+ D S+L+ E++L
Sbjct: 229 LLLVTLGEKGCRYYTKTFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERL 288
Query: 362 RDALRFANACGALTVMERGAIPALPTREAV 391
R LRFANACGA+T ++GAIPALP+ V
Sbjct: 289 RKVLRFANACGAITTTKKGAIPALPSDAEV 318
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q0JGZ6|SCRK1_ORYSJ Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/338 (59%), Positives = 250/338 (73%), Gaps = 20/338 (5%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
S LVV FGEMLIDFVPTV+G+SLAE+PAF KAPGGAPANVA+ +ARLGG +AF+GK
Sbjct: 5 SELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGK---- 60
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER 179
+G DEFG MLA IL++N V+ G+ FD GARTALAFVTLR+DGER
Sbjct: 61 ---------------LGDDEFGRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGER 105
Query: 180 EFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 239
EFMFYRNPSADMLL AEL++ LI +A +FHYGSISLI EPC+SAH+ A + AK+AG +L
Sbjct: 106 EFMFYRNPSADMLLTHAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALL 165
Query: 240 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299
SYDPNLR LWPS ++AR ILSIW+ ADI+K+SE E+ FLT G D +D VV KL+
Sbjct: 166 SYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPT 224
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
+KLLLVT G GC+YY +DF G V KV+ VD TGAGDAFV +L ++ D S LQ +
Sbjct: 225 MKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQK 284
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397
+L +A++FANACGA+T ++GAIP+LPT VL + +
Sbjct: 285 KLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMES 322
|
May play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | ||||||
| 358248484 | 383 | uncharacterized protein LOC100797023 [Gl | 0.94 | 0.981 | 0.793 | 1e-168 | |
| 384255902 | 386 | fructokinase [Eriobotrya japonica] | 0.945 | 0.979 | 0.742 | 1e-165 | |
| 357492165 | 386 | Fructokinase-2 [Medicago truncatula] gi| | 0.942 | 0.976 | 0.770 | 1e-163 | |
| 224077293 | 351 | predicted protein [Populus trichocarpa] | 0.86 | 0.980 | 0.751 | 1e-162 | |
| 408362891 | 386 | fructokinase [Malus x domestica] | 0.945 | 0.979 | 0.752 | 1e-162 | |
| 388506420 | 386 | unknown [Medicago truncatula] | 0.942 | 0.976 | 0.765 | 1e-160 | |
| 393395652 | 388 | FRK3 [Gossypium herbaceum] | 0.927 | 0.956 | 0.757 | 1e-160 | |
| 22330456 | 384 | fructokinase [Arabidopsis thaliana] gi|1 | 0.94 | 0.979 | 0.731 | 1e-159 | |
| 418731477 | 389 | fructokinase 3 [Solanum tuberosum] | 0.947 | 0.974 | 0.756 | 1e-159 | |
| 225453158 | 384 | PREDICTED: probable fructokinase-2 [Viti | 0.93 | 0.968 | 0.765 | 1e-158 |
| >gi|358248484|ref|NP_001240145.1| uncharacterized protein LOC100797023 [Glycine max] gi|255641428|gb|ACU20990.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/407 (79%), Positives = 346/407 (85%), Gaps = 31/407 (7%)
Query: 1 MALHSTAFCFTGAVSSYSHSSVKLSTHPTIKASS-------PLPRLNVRVKALPGDGLSE 53
MALH FCF V+S+ SSVKLS PTIKASS PL +LNVR KA PGDG
Sbjct: 1 MALHCGTFCFW-TVASHPPSSVKLS-QPTIKASSFSSPLAPPLVKLNVRGKAFPGDG--- 55
Query: 54 TKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFI 113
T ET+ESPLVVCFGEMLIDFVPTV+GLSLAE+PAFKKA GGAPANVAVGI+RLGGSSAFI
Sbjct: 56 TPETKESPLVVCFGEMLIDFVPTVNGLSLAEAPAFKKAAGGAPANVAVGISRLGGSSAFI 115
Query: 114 GKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTL 173
GK VG DEFGYMLA+ILKENNVN GMRFDPGARTALAFVTL
Sbjct: 116 GK-------------------VGEDEFGYMLANILKENNVNNEGMRFDPGARTALAFVTL 156
Query: 174 RSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 233
RSDGEREFMFYRNPSADMLLQE ELDL LI KAKIFHYGSISLITEPCKSAHIAAAKAAK
Sbjct: 157 RSDGEREFMFYRNPSADMLLQEDELDLDLIRKAKIFHYGSISLITEPCKSAHIAAAKAAK 216
Query: 234 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 293
DAGVVLSYDPNLRLPLWPSAD AREGILSIWETADIIKISEEEISFLT+GE+PYDDAVV+
Sbjct: 217 DAGVVLSYDPNLRLPLWPSADSAREGILSIWETADIIKISEEEISFLTKGENPYDDAVVH 276
Query: 294 KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS 353
KLFH +LKLLLVTEG +GCRYYTK+FSGRV+GLKV+AVD TGAGDAFVAGILSQL+ D S
Sbjct: 277 KLFHPSLKLLLVTEGAEGCRYYTKEFSGRVKGLKVDAVDTTGAGDAFVAGILSQLAVDLS 336
Query: 354 LLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPVS 400
+LQ ED+LRD+L+FAN CGALTV ERGAIPALPT+EAVLNA+ PVS
Sbjct: 337 ILQNEDELRDSLKFANVCGALTVTERGAIPALPTKEAVLNAMLKPVS 383
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384255902|gb|ADZ96381.2| fructokinase [Eriobotrya japonica] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/408 (74%), Positives = 330/408 (80%), Gaps = 30/408 (7%)
Query: 1 MALHSTAFCFTGAVS------SYSHSSVKLSTHPTIKASSP--LPRLNVRVKALPGDGLS 52
MALH+TAFCF G VS S+S +V+ S + S + NV+ KA GD L
Sbjct: 1 MALHATAFCFGGVVSLPRNSVSFSQRTVRASAFSSPPPLSSSSIAISNVQGKAFAGDALP 60
Query: 53 ETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAF 112
+TKE S LVVCFGEMLIDFVPT +GLSLAE+PAFKKA GGAPANVAVGIARLGGSSAF
Sbjct: 61 DTKE---SSLVVCFGEMLIDFVPTSNGLSLAETPAFKKAAGGAPANVAVGIARLGGSSAF 117
Query: 113 IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVT 172
IGK VG DEFGYMLADILKENNVN GMRFDPGARTALAFVT
Sbjct: 118 IGK-------------------VGEDEFGYMLADILKENNVNNEGMRFDPGARTALAFVT 158
Query: 173 LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 232
LRSDGEREF+FYRNPSADMLLQEAELD +LI KAKI HYGSISLITEPCKSAHIAA KAA
Sbjct: 159 LRSDGEREFLFYRNPSADMLLQEAELDFALIRKAKILHYGSISLITEPCKSAHIAATKAA 218
Query: 233 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV 292
KDAGVVLSYDPN+RLPLWPSA AREGILSIW+TAD+IKISEEEISFLT+GEDPYD+ VV
Sbjct: 219 KDAGVVLSYDPNVRLPLWPSAKSAREGILSIWDTADVIKISEEEISFLTEGEDPYDENVV 278
Query: 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352
KL+H NLKLLLVTEGPDGCRYYTK+FSGRV+G+KV+AVD TGAGDAFVAGILSQL+ D
Sbjct: 279 RKLYHPNLKLLLVTEGPDGCRYYTKEFSGRVEGMKVDAVDTTGAGDAFVAGILSQLAVDL 338
Query: 353 SLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPVS 400
SL Q ED+LRDAL FANACGALTV RGAIPALPTRE+VLN + V+
Sbjct: 339 SLHQDEDKLRDALLFANACGALTVTGRGAIPALPTRESVLNVLLKSVA 386
|
Source: Eriobotrya japonica Species: Eriobotrya japonica Genus: Eriobotrya Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357492165|ref|XP_003616371.1| Fructokinase-2 [Medicago truncatula] gi|355517706|gb|AES99329.1| Fructokinase-2 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 315/409 (77%), Positives = 339/409 (82%), Gaps = 32/409 (7%)
Query: 1 MALH-STAFCFTGAVSS------YSHSSVKLSTHPTIKASSPLPRLNVR--VKALPGDGL 51
MALH +F FT V++ +S VK S P+ S P RLN + KA+P +G
Sbjct: 1 MALHCGGSFTFTSVVTNPPGSVKFSQPIVKASVFPSTH-SPPNVRLNFKGKTKAIPENG- 58
Query: 52 SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA 111
+ ET+ESPLVVCFGEMLIDFVPTVSGLSLA++PAFKKAPGGAPANVAVGI+RLGGSSA
Sbjct: 59 --SPETKESPLVVCFGEMLIDFVPTVSGLSLADAPAFKKAPGGAPANVAVGISRLGGSSA 116
Query: 112 FIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFV 171
FIGK VG DEFGYMLADILKENNVN GMRFDPGARTALAFV
Sbjct: 117 FIGK-------------------VGEDEFGYMLADILKENNVNSQGMRFDPGARTALAFV 157
Query: 172 TLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKA 231
TLRSDGEREFMFYRNPSADMLLQE ELDL LITKAKIFHYGSISLITEPCKSAHIAAAKA
Sbjct: 158 TLRSDGEREFMFYRNPSADMLLQEDELDLDLITKAKIFHYGSISLITEPCKSAHIAAAKA 217
Query: 232 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAV 291
AK+AGV LSYDPNLRLPLWPSAD AREGILSIWETADIIKISEEEISFLT GEDPYDDAV
Sbjct: 218 AKEAGVFLSYDPNLRLPLWPSADSAREGILSIWETADIIKISEEEISFLTNGEDPYDDAV 277
Query: 292 VYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351
V KLFH NLKLLLVTEG +GCRYYTK+FSGRV G+KV+AVD TGAGDAFVAGILSQL+TD
Sbjct: 278 VRKLFHPNLKLLLVTEGAEGCRYYTKEFSGRVTGMKVDAVDTTGAGDAFVAGILSQLATD 337
Query: 352 FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPVS 400
SLLQKE+QLR++LRFANACGALTV ERGAIPALPT+E VLNA+ PVS
Sbjct: 338 LSLLQKEEQLRESLRFANACGALTVTERGAIPALPTKETVLNALLKPVS 386
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077293|ref|XP_002305200.1| predicted protein [Populus trichocarpa] gi|222848164|gb|EEE85711.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 296/394 (75%), Positives = 320/394 (81%), Gaps = 50/394 (12%)
Query: 2 ALHSTAFCFTGAVSSYSHSSVKLSTHPTIKASSPLPRLNVRVKALPGDGLSETKETRESP 61
ALHSTAFCF G V LS+ + ++T++S
Sbjct: 3 ALHSTAFCFGG---------VALSSRQELC----------------------FRQTKDSS 31
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCF 121
LVVCFGEMLIDFVPT+SGLSL+++PAFKKAPGGAPANVAVGIARLGGSSAFIGK
Sbjct: 32 LVVCFGEMLIDFVPTISGLSLSDAPAFKKAPGGAPANVAVGIARLGGSSAFIGK------ 85
Query: 122 YEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREF 181
VG DEFGYMLA+ILKENNVN GMRFDPGARTALAFVTLRSDGEREF
Sbjct: 86 -------------VGEDEFGYMLAEILKENNVNNEGMRFDPGARTALAFVTLRSDGEREF 132
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241
MFYRNPSADMLL+EAELDL LI KAKIFHYGSISLITEPCKSAHIAAAK AKDAGV LSY
Sbjct: 133 MFYRNPSADMLLKEAELDLDLIRKAKIFHYGSISLITEPCKSAHIAAAKVAKDAGVFLSY 192
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
DPNLRLPLWPSA+ AREGILSIW+TADIIKISEEEISFLT+GEDPYDDAVV KLFH NLK
Sbjct: 193 DPNLRLPLWPSAESAREGILSIWDTADIIKISEEEISFLTKGEDPYDDAVVQKLFHPNLK 252
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
LLLVTEGP+GCRYYTK+FSGRV+GLKV+AVD TGAGDAFVAGILSQL+ D SLLQ ED+L
Sbjct: 253 LLLVTEGPEGCRYYTKEFSGRVKGLKVDAVDTTGAGDAFVAGILSQLAMDLSLLQNEDRL 312
Query: 362 RDALRFANACGALTVMERGAIPALPTREAVLNAI 395
R+AL+FANACGALTV ERGAIPALPTREAV +AI
Sbjct: 313 REALKFANACGALTVKERGAIPALPTREAVNSAI 346
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|408362891|gb|AFU56877.1| fructokinase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 307/408 (75%), Positives = 333/408 (81%), Gaps = 30/408 (7%)
Query: 1 MALHSTAFCFTGAVS------SYSHSSVKLSTHPTIKASSP--LPRLNVRVKALPGDGLS 52
MALHSTAFCF G VS S+S +V+ S + + R NV+ KA GD L
Sbjct: 1 MALHSTAFCFGGVVSLPRNSVSFSQRTVRASAFSSPPPLGSSSIARSNVQGKAFAGDALP 60
Query: 53 ETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAF 112
+TKE S LVVCFGEMLIDFVPT +GLSLAE+PAFKKA GGAPANVAVGIARLGGSSAF
Sbjct: 61 DTKE---SSLVVCFGEMLIDFVPTSNGLSLAEAPAFKKAAGGAPANVAVGIARLGGSSAF 117
Query: 113 IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVT 172
IGK VG DEFGYMLADILKENNVN GMRFDPGARTALAFVT
Sbjct: 118 IGK-------------------VGEDEFGYMLADILKENNVNNEGMRFDPGARTALAFVT 158
Query: 173 LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 232
LRSDGEREFMFYRNPSADMLLQEAELD LI KAKI HYGSISLITEPCKSAHIAAAKAA
Sbjct: 159 LRSDGEREFMFYRNPSADMLLQEAELDFDLIRKAKILHYGSISLITEPCKSAHIAAAKAA 218
Query: 233 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV 292
+DAGVVLSYDPNLRLPLWPSA AREGILSIW+TAD+IKISEEE+SFLT+GEDPYD+ VV
Sbjct: 219 RDAGVVLSYDPNLRLPLWPSAKSAREGILSIWDTADVIKISEEEVSFLTEGEDPYDENVV 278
Query: 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352
KL+H NLKLLLVTEGPDGCRYYTK+FSGRV+G+KV+AVD TGAGDAFVAGILSQL+ D
Sbjct: 279 RKLYHPNLKLLLVTEGPDGCRYYTKEFSGRVKGMKVDAVDTTGAGDAFVAGILSQLAVDL 338
Query: 353 SLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPVS 400
SLLQ+ED+LRDAL FANACGALTV ERGAIPALPTRE+VLN + V+
Sbjct: 339 SLLQEEDKLRDALVFANACGALTVTERGAIPALPTRESVLNVLLKSVA 386
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388506420|gb|AFK41276.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/409 (76%), Positives = 337/409 (82%), Gaps = 32/409 (7%)
Query: 1 MALH-STAFCFTGAVSS------YSHSSVKLSTHPTIKASSPLPRLNVR--VKALPGDGL 51
MALH +F FT V++ +S VK S P+ S P RLN + KA+P +G
Sbjct: 1 MALHCGGSFTFTSVVTNPPGSVKFSQPIVKASVFPSTH-SPPNVRLNFKGKTKAIPENG- 58
Query: 52 SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA 111
+ ET+ESPLVVCFGEMLIDFVPTVSGLSLA++PAFKKAPGGAPANVAVGI+RLGGSSA
Sbjct: 59 --SPETKESPLVVCFGEMLIDFVPTVSGLSLADAPAFKKAPGGAPANVAVGISRLGGSSA 116
Query: 112 FIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFV 171
FIGK VG DEFGYMLADILKENNVN GMRFDPGARTALAFV
Sbjct: 117 FIGK-------------------VGEDEFGYMLADILKENNVNSQGMRFDPGARTALAFV 157
Query: 172 TLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKA 231
TLRSDGEREFMFYRNPSADM LQE ELDL LITKAKIFHYGSISLITEPCKSAHIAAAKA
Sbjct: 158 TLRSDGEREFMFYRNPSADMPLQEDELDLDLITKAKIFHYGSISLITEPCKSAHIAAAKA 217
Query: 232 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAV 291
AK+AGV LSYDPNLRLPLWPSAD AREGILSIWETADIIKISEEEISFLT GEDPYD AV
Sbjct: 218 AKEAGVFLSYDPNLRLPLWPSADSAREGILSIWETADIIKISEEEISFLTNGEDPYDGAV 277
Query: 292 VYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351
V KLFH NLKLLLVTEG +GCRYYTK+FSGRV G+KV+AVD TGAGDAFVAGILSQL+TD
Sbjct: 278 VRKLFHPNLKLLLVTEGAEGCRYYTKEFSGRVTGMKVDAVDTTGAGDAFVAGILSQLATD 337
Query: 352 FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPVS 400
SLLQKE+QLR++LRFANACGALTV ERGAIPALPT+E VLNA+ PVS
Sbjct: 338 PSLLQKEEQLRESLRFANACGALTVTERGAIPALPTKETVLNALLKPVS 386
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|393395652|gb|AFN08699.1| FRK3 [Gossypium herbaceum] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 306/404 (75%), Positives = 335/404 (82%), Gaps = 33/404 (8%)
Query: 2 ALHSTAFCFTGAVSSYS-HSSVKLSTHPTIKASS---------PLPRLNVRVKALPGDGL 51
AL+ST+ CF G++ SY H SVKL H ++ S P+L+V+ KAL DGL
Sbjct: 3 ALYSTSSCFCGSLGSYPVHKSVKLG-HGKVRDSGFYFPHRFQCATPKLHVQAKALSVDGL 61
Query: 52 SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA 111
E +S LVVCFGEMLIDFVPT+SGLSLAE+PAFKKAPGGAPANVAVGIARLGGSSA
Sbjct: 62 ---PEIMDSSLVVCFGEMLIDFVPTISGLSLAEAPAFKKAPGGAPANVAVGIARLGGSSA 118
Query: 112 FIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFV 171
FIGK VG DEFGYMLADILKENNVN GMRFDPGARTALAFV
Sbjct: 119 FIGK-------------------VGEDEFGYMLADILKENNVNNEGMRFDPGARTALAFV 159
Query: 172 TLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKA 231
TLRSDGEREFMFYRNPSADMLLQE ELD LITKA IFHYGSISLITEPCKSAHIAAAKA
Sbjct: 160 TLRSDGEREFMFYRNPSADMLLQENELDFDLITKATIFHYGSISLITEPCKSAHIAAAKA 219
Query: 232 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAV 291
AKDAGVVLSYDPNLRLPLWPS + AR+GILSIW+TADIIK+SEEEISFLTQGEDPYDD V
Sbjct: 220 AKDAGVVLSYDPNLRLPLWPSVESARKGILSIWDTADIIKVSEEEISFLTQGEDPYDDGV 279
Query: 292 VYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351
V KLFH+NLKLLLVTEGPDGCRYYT++FSG+V+GLKVEAVD TGAGDAFVAG LSQL++D
Sbjct: 280 VRKLFHSNLKLLLVTEGPDGCRYYTQEFSGKVKGLKVEAVDTTGAGDAFVAGTLSQLASD 339
Query: 352 FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
SL+Q EDQLR+AL+F+N CGALTV ERGAIPALPTREAV+NA+
Sbjct: 340 LSLIQDEDQLRNALKFSNVCGALTVTERGAIPALPTREAVVNAL 383
|
Source: Gossypium herbaceum Species: Gossypium herbaceum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22330456|ref|NP_564875.2| fructokinase [Arabidopsis thaliana] gi|12322265|gb|AAG51160.1|AC074025_10 fructokinase, putative [Arabidopsis thaliana] gi|12324405|gb|AAG52172.1|AC020665_17 fructokinase, putative; 80047-82040 [Arabidopsis thaliana] gi|332196387|gb|AEE34508.1| fructokinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 291/398 (73%), Positives = 320/398 (80%), Gaps = 22/398 (5%)
Query: 1 MALH--STAFCFTGAVSSYSHSSVKLSTHPTIKASSPLP-RLNVRVKALPGDGLSETKET 57
MAL +T FCF+G + S+ +IKA++ P RL+ L G LS T
Sbjct: 1 MALQATTTTFCFSGPTFRSTPHSLTSKRPISIKATTSSPSRLSNSRSNLKGRALSSDGST 60
Query: 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTT 117
+ESP VVCFGEMLIDFVPT SGLSLA++PAFKKAPGGAPANVAVGIARLGGSSAFIGK
Sbjct: 61 QESPYVVCFGEMLIDFVPTTSGLSLADAPAFKKAPGGAPANVAVGIARLGGSSAFIGK-- 118
Query: 118 LFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDG 177
VG DEFGYMLA+ILK+NNVN GMRFDPGARTALAFVTL ++G
Sbjct: 119 -----------------VGEDEFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLTNEG 161
Query: 178 EREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 237
EREFMFYRNPSADMLL+E+ELD LI KAKIFHYGSISLITEPCKSAHI+AAKAAK+AGV
Sbjct: 162 EREFMFYRNPSADMLLEESELDFDLIKKAKIFHYGSISLITEPCKSAHISAAKAAKEAGV 221
Query: 238 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297
+LSYDPNLRLPLWPSAD ARE ILSIWETADIIKISEEEI FLT+GEDPYDD VV KLFH
Sbjct: 222 ILSYDPNLRLPLWPSADNAREEILSIWETADIIKISEEEIVFLTKGEDPYDDNVVRKLFH 281
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357
LKLLLVTEGP+GCRYYTKDFSGRV GLKV+ VD TGAGDAFVAGILSQL+ D SLLQ
Sbjct: 282 PKLKLLLVTEGPEGCRYYTKDFSGRVHGLKVDVVDTTGAGDAFVAGILSQLANDLSLLQD 341
Query: 358 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
E++LR+AL FANACGALTV RGAIPALPT+EAV A+
Sbjct: 342 EERLREALMFANACGALTVKVRGAIPALPTKEAVHEAL 379
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|418731477|gb|AFX67038.1| fructokinase 3 [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/410 (75%), Positives = 336/410 (81%), Gaps = 31/410 (7%)
Query: 1 MALHSTAFCFTGAVSSYSHSSVKL-STHP-----TIKASSP----LPRLNVRVKALPGDG 50
MALH TAF FTG +S S L S P T+KA+S +PR ++ +ALP D
Sbjct: 1 MALHVTAFSFTGVSTSSKASRSSLLSVFPAPRRCTVKAASQYPPSIPRCKIQGRALPSD- 59
Query: 51 LSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSS 110
+ E ES LVVCFGEMLIDFVPT+SGLSLAE+PAFKKAPGGAPANVAVGI+RLGGSS
Sbjct: 60 -NGPLEKDESSLVVCFGEMLIDFVPTISGLSLAEAPAFKKAPGGAPANVAVGISRLGGSS 118
Query: 111 AFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAF 170
AFIGK VG DEFGYMLA+ILKENNVN GMRFDPGARTALAF
Sbjct: 119 AFIGK-------------------VGEDEFGYMLAEILKENNVNSDGMRFDPGARTALAF 159
Query: 171 VTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAK 230
VTLR DGEREFMFYRNPSADMLLQE ELDL LI KAK+FHYGSISLITEPCKSAHIAAAK
Sbjct: 160 VTLRKDGEREFMFYRNPSADMLLQEDELDLELIRKAKVFHYGSISLITEPCKSAHIAAAK 219
Query: 231 AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA 290
AAKDAGV+LSYDPNLRLPLWPSA+ AREGILSIW+TADIIKISEEEISFLTQGEDPYDD
Sbjct: 220 AAKDAGVILSYDPNLRLPLWPSAESAREGILSIWDTADIIKISEEEISFLTQGEDPYDDN 279
Query: 291 VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350
VV KL+H NLKLLLVTEGP+GCRYYTKDFSGRV+G+KV+AVD TGAGDAFVAGILSQL++
Sbjct: 280 VVRKLYHPNLKLLLVTEGPEGCRYYTKDFSGRVKGIKVDAVDTTGAGDAFVAGILSQLAS 339
Query: 351 DFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPVS 400
D SLLQ E +LRDAL FANACGALTVMERGAIPALPTRE VLNA+ V+
Sbjct: 340 DVSLLQDESKLRDALSFANACGALTVMERGAIPALPTREVVLNALLKSVA 389
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453158|ref|XP_002274388.1| PREDICTED: probable fructokinase-2 [Vitis vinifera] gi|296087158|emb|CBI33532.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/397 (76%), Positives = 331/397 (83%), Gaps = 25/397 (6%)
Query: 3 LHSTAFCFTGAV----SSYSHSSVKLSTHPTIKASSPLPRLNVRVKALPGDGLSETKETR 58
LHS FCFT S SH + + +S LP L+++ KA+PGD + + ET+
Sbjct: 4 LHSNGFCFTAVAFNHPPSVSHGPGTVKASCSPFSSPSLPLLSLQRKAIPGD--NGSPETK 61
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
E+ LVVCFGEMLIDFVPT +GLSLAE+PAFKKAPGGAPANVAVGIARLGGSSAFIGK
Sbjct: 62 ENSLVVCFGEMLIDFVPTSNGLSLAEAPAFKKAPGGAPANVAVGIARLGGSSAFIGK--- 118
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
VG DEFGYMLADILKENNVN GMRFDPGARTALAFVTLR DGE
Sbjct: 119 ----------------VGEDEFGYMLADILKENNVNNEGMRFDPGARTALAFVTLRKDGE 162
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 238
REFMFYRNPSADMLLQE ELD LI KAKIFHYGSISLITEPCKSAH+AAAKAAKDAGV+
Sbjct: 163 REFMFYRNPSADMLLQEDELDFDLIRKAKIFHYGSISLITEPCKSAHLAAAKAAKDAGVI 222
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298
+SYDPNLRLPLWPSAD AREGILSIW TADIIK+SEEEISFLT+GEDPYDDAVV K +H
Sbjct: 223 VSYDPNLRLPLWPSADSAREGILSIWNTADIIKMSEEEISFLTKGEDPYDDAVVRKFYHP 282
Query: 299 NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKE 358
NLKLLLVTEGPDGCRYYTKDFSGRV+GLKV+AVD TGAGDAFVAGILSQL+ D SLLQ+E
Sbjct: 283 NLKLLLVTEGPDGCRYYTKDFSGRVKGLKVDAVDTTGAGDAFVAGILSQLAADLSLLQEE 342
Query: 359 DQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
D+LRDAL+FANACGALTVMERGAIPALP+REAVLNA+
Sbjct: 343 DRLRDALKFANACGALTVMERGAIPALPSREAVLNAM 379
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | ||||||
| TAIR|locus:2028987 | 384 | AT1G66430 [Arabidopsis thalian | 0.655 | 0.682 | 0.790 | 3e-127 | |
| TAIR|locus:2165361 | 343 | AT5G51830 [Arabidopsis thalian | 0.645 | 0.752 | 0.679 | 3.1e-106 | |
| TAIR|locus:2198831 | 329 | AT1G06030 [Arabidopsis thalian | 0.632 | 0.768 | 0.625 | 3e-93 | |
| TAIR|locus:2122789 | 324 | AT4G10260 [Arabidopsis thalian | 0.632 | 0.780 | 0.625 | 3.8e-93 | |
| TAIR|locus:2097553 | 326 | AT3G59480 [Arabidopsis thalian | 0.642 | 0.788 | 0.604 | 3.4e-92 | |
| TAIR|locus:2198821 | 345 | AT1G06020 [Arabidopsis thalian | 0.632 | 0.733 | 0.606 | 1.3e-90 | |
| TAIR|locus:2061320 | 325 | AT2G31390 [Arabidopsis thalian | 0.632 | 0.778 | 0.598 | 3e-89 | |
| UNIPROTKB|Q481A7 | 336 | CPS_2648 "Carbohydrate kinase, | 0.63 | 0.75 | 0.338 | 5.7e-38 | |
| TIGR_CMR|CPS_2648 | 336 | CPS_2648 "carbohydrate kinase, | 0.63 | 0.75 | 0.338 | 5.7e-38 | |
| TAIR|locus:2011897 | 146 | AT1G50390 [Arabidopsis thalian | 0.22 | 0.602 | 0.613 | 5.7e-38 |
| TAIR|locus:2028987 AT1G66430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1061 (378.5 bits), Expect = 3.0e-127, Sum P(2) = 3.0e-127
Identities = 207/262 (79%), Positives = 223/262 (85%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
KVG DEFGYMLA+ILK+NNVN GMRFDPGARTALAFVTL ++GEREFMFYRNPSADMLL
Sbjct: 118 KVGEDEFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLTNEGEREFMFYRNPSADMLL 177
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+E+ELD LI KAKIFHYGSISLITEPC GV+LSYDPNLRLPLWPSA
Sbjct: 178 EESELDFDLIKKAKIFHYGSISLITEPCKSAHISAAKAAKEAGVILSYDPNLRLPLWPSA 237
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
D ARE ILSIWETADIIKISEEEI FLT+GEDPYDD VV KLFH LKLLLVTEGP+GCR
Sbjct: 238 DNAREEILSIWETADIIKISEEEIVFLTKGEDPYDDNVVRKLFHPKLKLLLVTEGPEGCR 297
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373
YYTKDFSGRV GLKV+ VD TGAGDAFVAGILSQL+ D SLLQ E++LR+AL FANACGA
Sbjct: 298 YYTKDFSGRVHGLKVDVVDTTGAGDAFVAGILSQLANDLSLLQDEERLREALMFANACGA 357
Query: 374 LTVMERGAIPALPTREAVLNAI 395
LTV RGAIPALPT+EAV A+
Sbjct: 358 LTVKVRGAIPALPTKEAVHEAL 379
|
|
| TAIR|locus:2165361 AT5G51830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 911 (325.7 bits), Expect = 3.1e-106, Sum P(2) = 3.1e-106
Identities = 176/259 (67%), Positives = 212/259 (81%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
KVG DEFG MLADIL+ NNV+ +GMRFD ARTALAFVTLR DGEREF+F+R+PSADMLL
Sbjct: 76 KVGDDEFGRMLADILRLNNVDNSGMRFDHNARTALAFVTLRGDGEREFLFFRHPSADMLL 135
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
E+ELD +LI KAKIFHYGSISLI EPC G +LSYDPNLRLPLWPS
Sbjct: 136 LESELDKNLIQKAKIFHYGSISLIEEPCRSTQLVAMKIAKAAGSLLSYDPNLRLPLWPSE 195
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY-KLFHANLKLLLVTEGPDGC 312
+ AR+ I+SIW AD+IKISE+EI+FLT G+DPYDD VV KLFH NLKLL+V+EGP+GC
Sbjct: 196 EAARKEIMSIWNLADVIKISEDEITFLTGGDDPYDDDVVLQKLFHPNLKLLVVSEGPNGC 255
Query: 313 RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372
RYYT++F GRV G+KV+ VD TGAGDAFV+G+L+ L++D +LL+ E +LR+AL FANACG
Sbjct: 256 RYYTQEFKGRVGGVKVKPVDTTGAGDAFVSGLLNSLASDLTLLKDEKKLREALLFANACG 315
Query: 373 ALTVMERGAIPALPTREAV 391
A+TV ERGAIPA+P+ +AV
Sbjct: 316 AITVTERGAIPAMPSMDAV 334
|
|
| TAIR|locus:2198831 AT1G06030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 821 (294.1 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 159/254 (62%), Positives = 194/254 (76%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
K+G DEFG+MLA IL++N+V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL
Sbjct: 64 KLGDDEFGHMLAGILRKNDVDDQGINFDKGARTALAFVTLRSDGEREFMFYRNPSADMLL 123
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+ EL+L LI AK+FHYGSISLITEPC G +LSYDPNLR PLWPS
Sbjct: 124 RPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSP 183
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
++AR+ I+SIW+ ADIIK+S+ E+ FLT G DD L+H NLKLLLVT G +GCR
Sbjct: 184 EEARKQIMSIWDKADIIKVSDVELEFLT-GNKTIDDETAMSLWHPNLKLLLVTLGENGCR 242
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373
YYTKDF G V+ V+AVD TGAGD+FV +L+Q+ D S+L++E++LR LRFANACGA
Sbjct: 243 YYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGA 302
Query: 374 LTVMERGAIPALPT 387
+T ++GAIPALPT
Sbjct: 303 ITTTKKGAIPALPT 316
|
|
| TAIR|locus:2122789 AT4G10260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 813 (291.2 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 159/254 (62%), Positives = 189/254 (74%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
K G DEFG+ML +ILK+N VN G+ FD ARTALAFVTL+ DGEREFMFYRNPSADMLL
Sbjct: 59 KFGDDEFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLL 118
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+E+EL+ LI KAKIFHYGSISLI+EPC GV+LSYDPN+RLPLWPS
Sbjct: 119 KESELNKDLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPST 178
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
+ A EGI SIW ADIIK+S++E++FLT+G+ DD VV L H LKLL+VT+G GCR
Sbjct: 179 EAAIEGIKSIWNEADIIKVSDDEVTFLTRGDAEKDD-VVLSLMHDKLKLLIVTDGEKGCR 237
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373
YYTK F GRV G V+AVD TGAGD+FV L L D S+L E +L++AL FANACGA
Sbjct: 238 YYTKKFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGA 297
Query: 374 LTVMERGAIPALPT 387
+ ++GAIPALPT
Sbjct: 298 VCTTQKGAIPALPT 311
|
|
| TAIR|locus:2097553 AT3G59480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 807 (289.1 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 156/258 (60%), Positives = 191/258 (74%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
K+G DEFG+MLA ILK+N V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL
Sbjct: 63 KLGDDEFGHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGEREFMFYRNPSADMLL 122
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+ EL+L +I AK+FHYGSISLI EPC G +LSYDPNLRLPLWPS
Sbjct: 123 RPDELNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSK 182
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
++A++ ILSIW+ A++IK+S+EE+ FLT G D DD L+H+NLKLLLVT G GCR
Sbjct: 183 EEAQKQILSIWDKAEVIKVSDEELMFLT-GSDKVDDETALSLWHSNLKLLLVTLGEKGCR 241
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373
YYTK F G V V+AVD TGAGD+FV +L ++ D ++L+ E +LR+ LR ANACGA
Sbjct: 242 YYTKSFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGA 301
Query: 374 LTVMERGAIPALPTREAV 391
+T ++GAIPALPT V
Sbjct: 302 ITTTKKGAIPALPTESEV 319
|
|
| TAIR|locus:2198821 AT1G06020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 787 (282.1 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 154/254 (60%), Positives = 187/254 (73%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
K+G D+FG+MLA IL++N V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL
Sbjct: 63 KLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLL 122
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+ EL+L LI AK+FHYGSISLITEPC G +LSYDPNLR PLWPS
Sbjct: 123 RPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSP 182
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
++AR I+SIW+ ADIIK+S+ E+ FLT+ + DD L+H NLKLLLVT G GC
Sbjct: 183 EEARTQIMSIWDKADIIKVSDVELEFLTENKT-MDDKTAMSLWHPNLKLLLVTLGEKGCT 241
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373
Y+TK F G V+ V+AVD TGAGD+FV +L Q+ D S+L+ E +LR LRFANACGA
Sbjct: 242 YFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGA 301
Query: 374 LTVMERGAIPALPT 387
+T ++GAIPALPT
Sbjct: 302 ITTTKKGAIPALPT 315
|
|
| TAIR|locus:2061320 AT2G31390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 783 (280.7 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 152/254 (59%), Positives = 187/254 (73%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
K+G DEFG+MLA IL++N V+ G+ FD GARTALAFVTLR+DG+REFMFYRNPSADMLL
Sbjct: 62 KLGDDEFGHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFYRNPSADMLL 121
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+ EL+L LI AK+FHYGSISLI EPC G +LSYDPNLR PLWPS
Sbjct: 122 RPDELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSK 181
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
++A+ I+SIW+ A+IIK+S+ E+ FLT G + DD L+H NLKLLLVT G GCR
Sbjct: 182 EEAKTQIMSIWDKAEIIKVSDVELEFLT-GSNKIDDETALTLWHPNLKLLLVTLGEKGCR 240
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373
YYTK F G V V AVD TGAGD+FV +L+Q+ D S+L+ E++LR LRFANACGA
Sbjct: 241 YYTKTFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGA 300
Query: 374 LTVMERGAIPALPT 387
+T ++GAIPALP+
Sbjct: 301 ITTTKKGAIPALPS 314
|
|
| UNIPROTKB|Q481A7 CPS_2648 "Carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 88/260 (33%), Positives = 137/260 (52%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
+VG D FG L + L V+ + P A+TALAFV L GER F F+R+ +AD+L
Sbjct: 57 QVGDDAFGDFLINALHTYQVDTQFVSKHPHAKTALAFVLLDEMGERSFSFHRHQTADLLF 116
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+++++D ++ IFH+ S +L + G ++S+D NLR LW +
Sbjct: 117 EKSQVDEIWFCESPIFHFCSNTLTEKDIADCTEYAVERALVHGAIISFDVNLRHNLWATG 176
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
+ + + + A ++K S EE+++L QG ++ + F AN +LL++T+G +
Sbjct: 177 KVSISVVNKLVKQAHVLKFSSEELTYLAQGNI---ESYIQSCFDANCQLLIITDGENVLT 233
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS----LLQKEDQLRDALRFAN 369
YYT + KV VD T GDAF+ +L LS F LL + L+ + F+
Sbjct: 234 YYTAAILDAISPPKVITVDTTAGGDAFIGALLFALS-HFEQLTELLDDNELLKQIINFSA 292
Query: 370 ACGALTVMERGAIPALPTRE 389
+CGALTV + GA PALP E
Sbjct: 293 SCGALTVTKAGAFPALPNFE 312
|
|
| TIGR_CMR|CPS_2648 CPS_2648 "carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 88/260 (33%), Positives = 137/260 (52%)
Query: 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193
+VG D FG L + L V+ + P A+TALAFV L GER F F+R+ +AD+L
Sbjct: 57 QVGDDAFGDFLINALHTYQVDTQFVSKHPHAKTALAFVLLDEMGERSFSFHRHQTADLLF 116
Query: 194 QEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSA 253
+++++D ++ IFH+ S +L + G ++S+D NLR LW +
Sbjct: 117 EKSQVDEIWFCESPIFHFCSNTLTEKDIADCTEYAVERALVHGAIISFDVNLRHNLWATG 176
Query: 254 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 313
+ + + + A ++K S EE+++L QG ++ + F AN +LL++T+G +
Sbjct: 177 KVSISVVNKLVKQAHVLKFSSEELTYLAQGNI---ESYIQSCFDANCQLLIITDGENVLT 233
Query: 314 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS----LLQKEDQLRDALRFAN 369
YYT + KV VD T GDAF+ +L LS F LL + L+ + F+
Sbjct: 234 YYTAAILDAISPPKVITVDTTAGGDAFIGALLFALS-HFEQLTELLDDNELLKQIINFSA 292
Query: 370 ACGALTVMERGAIPALPTRE 389
+CGALTV + GA PALP E
Sbjct: 293 SCGALTVTKAGAFPALPNFE 312
|
|
| TAIR|locus:2011897 AT1G50390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 54/88 (61%), Positives = 69/88 (78%)
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
+KLLLVT G GCRYYTKDF G V+ V+AVD TGAGD+FV +L+Q+ D S+L++E+
Sbjct: 45 IKLLLVTLGEKGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEE 104
Query: 360 QLRDALRFANACGALTVMERGAIPALPT 387
+LR LR ANACGA+T ++GAIPALPT
Sbjct: 105 RLRKVLRIANACGAITTTKKGAIPALPT 132
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 400 | |||
| PLN02323 | 330 | PLN02323, PLN02323, probable fructokinase | 0.0 | |
| cd01167 | 295 | cd01167, bac_FRK, Fructokinases (FRKs) mainly from | 1e-124 | |
| cd01166 | 294 | cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg | 6e-83 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 7e-81 | |
| COG0524 | 311 | COG0524, RbsK, Sugar kinases, ribokinase family [C | 3e-71 | |
| pfam00294 | 298 | pfam00294, PfkB, pfkB family carbohydrate kinase | 7e-71 | |
| PLN02543 | 496 | PLN02543, PLN02543, pfkB-type carbohydrate kinase | 7e-57 | |
| PLN02967 | 581 | PLN02967, PLN02967, kinase | 1e-45 | |
| cd01174 | 292 | cd01174, ribokinase, Ribokinase catalyses the phos | 1e-43 | |
| TIGR02152 | 293 | TIGR02152, D_ribokin_bact, ribokinase | 4e-41 | |
| cd01942 | 279 | cd01942, ribokinase_group_A, Ribokinase-like subgr | 8e-34 | |
| cd01168 | 312 | cd01168, adenosine_kinase, Adenosine kinase (AK) c | 1e-29 | |
| PRK11142 | 306 | PRK11142, PRK11142, ribokinase; Provisional | 9e-21 | |
| cd01940 | 264 | cd01940, Fructoselysine_kinase_like, Fructoselysin | 1e-20 | |
| cd01945 | 284 | cd01945, ribokinase_group_B, Ribokinase-like subgr | 7e-19 | |
| PTZ00292 | 326 | PTZ00292, PTZ00292, ribokinase; Provisional | 4e-18 | |
| cd01947 | 265 | cd01947, Guanosine_kinase_like, Guanosine kinase-l | 2e-15 | |
| cd00287 | 196 | cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup | 9e-14 | |
| cd01172 | 304 | cd01172, RfaE_like, RfaE encodes a bifunctional AD | 1e-13 | |
| TIGR03168 | 303 | TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki | 1e-13 | |
| COG1105 | 310 | COG1105, FruK, Fructose-1-phosphate kinase and rel | 5e-13 | |
| PRK09813 | 260 | PRK09813, PRK09813, fructoselysine 6-kinase; Provi | 4e-12 | |
| TIGR03828 | 304 | TIGR03828, pfkB, 1-phosphofructokinase | 8e-12 | |
| cd01944 | 289 | cd01944, YegV_kinase_like, YegV-like sugar kinase | 5e-11 | |
| cd01164 | 289 | cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr | 8e-11 | |
| cd01941 | 288 | cd01941, YeiC_kinase_like, YeiC-like sugar kinase | 3e-10 | |
| PLN02341 | 470 | PLN02341, PLN02341, pfkB-type carbohydrate kinase | 5e-10 | |
| PLN02630 | 335 | PLN02630, PLN02630, pfkB-type carbohydrate kinase | 9e-07 | |
| TIGR02198 | 315 | TIGR02198, rfaE_dom_I, rfaE bifunctional protein, | 3e-05 | |
| PLN02813 | 426 | PLN02813, PLN02813, pfkB-type carbohydrate kinase | 5e-05 | |
| cd01939 | 290 | cd01939, Ketohexokinase, Ketohexokinase (fructokin | 5e-05 | |
| PRK09850 | 313 | PRK09850, PRK09850, pseudouridine kinase; Provisio | 2e-04 | |
| cd01937 | 254 | cd01937, ribokinase_group_D, Ribokinase-like subgr | 5e-04 | |
| PRK13508 | 309 | PRK13508, PRK13508, tagatose-6-phosphate kinase; P | 6e-04 | |
| PLN02379 | 367 | PLN02379, PLN02379, pfkB-type carbohydrate kinase | 0.002 | |
| PLN02548 | 332 | PLN02548, PLN02548, adenosine kinase | 0.002 | |
| PRK11316 | 473 | PRK11316, PRK11316, bifunctional heptose 7-phospha | 0.003 | |
| PTZ00247 | 345 | PTZ00247, PTZ00247, adenosine kinase; Provisional | 0.004 |
| >gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase | Back alignment and domain information |
|---|
Score = 638 bits (1648), Expect = 0.0
Identities = 257/343 (74%), Positives = 289/343 (84%), Gaps = 20/343 (5%)
Query: 54 TKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFI 113
T ES LVVCFGEMLIDFVPTVSG+SLAE+PAFKKAPGGAPANVAVGI+RLGGSSAFI
Sbjct: 4 APSTAESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFI 63
Query: 114 GKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTL 173
GK VG DEFG+MLADILK+N VN G+RFDPGARTALAFVTL
Sbjct: 64 GK-------------------VGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTL 104
Query: 174 RSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 233
RSDGEREFMFYRNPSADMLL+E+ELDL LI KAKIFHYGSISLITEPC+SAH+AA K AK
Sbjct: 105 RSDGEREFMFYRNPSADMLLRESELDLDLIRKAKIFHYGSISLITEPCRSAHLAAMKIAK 164
Query: 234 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 293
+AG +LSYDPNLRLPLWPSA+ AREGI+SIW+ ADIIK+S+EE+ FLT G+DP DD VV
Sbjct: 165 EAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDTVV- 223
Query: 294 KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS 353
KL+H NLKLLLVTEG +GCRYYTKDF GRV+G KV+AVD TGAGDAFV G+LSQL+ D S
Sbjct: 224 KLWHPNLKLLLVTEGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLS 283
Query: 354 LLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 396
LL+ E++LR+ALRFANACGA+T ERGAIPALPT+EAVL +
Sbjct: 284 LLEDEERLREALRFANACGAITTTERGAIPALPTKEAVLKLLK 326
|
Length = 330 |
| >gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Score = 360 bits (926), Expect = e-124
Identities = 168/321 (52%), Positives = 209/321 (65%), Gaps = 26/321 (8%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCF 121
VVCFGE LIDF+P SG F KAPGGAPANVAV +ARLGG +AFIGK
Sbjct: 1 KVVCFGEALIDFIPEGSGAP----ETFTKAPGGAPANVAVALARLGGKAAFIGK------ 50
Query: 122 YEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREF 181
VG DEFG L + LKE V+ G++FDP A T LAFVTL +DGER F
Sbjct: 51 -------------VGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSF 97
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241
FYR P+AD+LL + EL+ L+++A I H+GSI+L +EP +SA + +AAK AGV++S+
Sbjct: 98 EFYRGPAADLLL-DTELNPDLLSEADILHFGSIALASEPSRSALLELLEAAKKAGVLISF 156
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
DPNLR PLW ++ARE I + E ADI+K+S+EE+ L EDP + + L LK
Sbjct: 157 DPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEEDP--EEIAALLLLFGLK 214
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
L+LVT G DG YTK G V G+ VE VD TGAGDAFVAG+L+QL + L ED+L
Sbjct: 215 LVLVTRGADGALLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDEL 274
Query: 362 RDALRFANACGALTVMERGAI 382
+ALRFANA GALT + GAI
Sbjct: 275 AEALRFANAVGALTCTKAGAI 295
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295 |
| >gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Score = 255 bits (653), Expect = 6e-83
Identities = 118/321 (36%), Positives = 160/321 (49%), Gaps = 29/321 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
VV GE+++D P G L ++ +F+K GGA ANVAVG+ARLG A +
Sbjct: 2 VVTIGEVMVDLSPPGGG-RLEQADSFRKFFGGAEANVAVGLARLGHRVALVTA------- 53
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
VG D FG + L+ V+ + +R DPG T L F+ + + GER +
Sbjct: 54 ------------VGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVL 101
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVLSY 241
+YR SA L +LD + + A H I+L ++E + A + A +AAK GV +S+
Sbjct: 102 YYRAGSAASRLTPEDLDEAALAGADHLHLSGITLALSESAREALLEALEAAKARGVTVSF 161
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
D N R LW SA++ARE + + DI+ SEEE L EDP D A +K
Sbjct: 162 DLNYRPKLW-SAEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTDAAERALALALGVK 220
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
++V G +G YT V VE VD TGAGDAF AG L+ L + L
Sbjct: 221 AVVVKLGAEGALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------L 273
Query: 362 RDALRFANACGALTVMERGAI 382
+ALRFANA AL V G I
Sbjct: 274 EEALRFANAAAALVVTRPGDI 294
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 250 bits (640), Expect = 7e-81
Identities = 121/299 (40%), Positives = 157/299 (52%), Gaps = 23/299 (7%)
Query: 90 KAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILK 149
K PGGAPANVAVGIARLGG S FIG+ VG D FG + L+
Sbjct: 25 KCPGGAPANVAVGIARLGGESGFIGR-------------------VGDDPFGRFMQQTLQ 65
Query: 150 ENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIF 209
+ V+ +R DP RT+ V L GER F F PSAD+ LQ DL + +
Sbjct: 66 DEGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQ--DLPPFRQGEWL 123
Query: 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADI 269
H SI+L EP +S A + K AG +S+DPNLR LW + RE + AD+
Sbjct: 124 HLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADV 183
Query: 270 IKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE 329
+K+SEEE+ FL+ G +DA+ + LLLVT G +G +T+ V+
Sbjct: 184 VKLSEEELCFLS-GTSQLEDAIYALADRYPIALLLVTLGAEGVLVHTRGQVQHFPAPSVD 242
Query: 330 AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 388
VD TGAGDAFVAG+L+ LS L E +L + + A ACGAL +GA+ ALP R
Sbjct: 243 PVDTTGAGDAFVAGLLAGLS-QAGLWTDEAELAEIIAQAQACGALATTAKGAMTALPNR 300
|
Length = 304 |
| >gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 3e-71
Identities = 125/338 (36%), Positives = 161/338 (47%), Gaps = 43/338 (12%)
Query: 63 VVCFGEMLIDFVPTVSG-----LSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTT 117
VV GE +D + V FK A GG ANVAV +ARLG A IG
Sbjct: 2 VVVIGEANVDLIAQVVDRLPEPGETVLGDFFKVAGGGKGANVAVALARLGAKVALIGA-- 59
Query: 118 LFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDG 177
VG D+FG L + L++ V+ + + D GA T LA + + DG
Sbjct: 60 -----------------VGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDG 102
Query: 178 EREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 237
ER F+FYR A +LL +LD + A + H I L P A +AA + AK AGV
Sbjct: 103 ERTFVFYRGA-AALLLTPEDLDEDELAGADVLHISGIQLEIPP--EALLAALELAKAAGV 159
Query: 238 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297
+S+D N R LW RE + + ADI+ +EEE LT G + +A L
Sbjct: 160 TVSFDLNPRPALWD-----RELLEELLALADILFPNEEEAELLT-GLEEDAEAAAALLLA 213
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRV---QGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354
+K ++VT G +G +T V KV+ VD TGAGDAF AG L+ L S
Sbjct: 214 KGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS- 272
Query: 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 392
L +ALRFANA AL V GA P+LPTRE V
Sbjct: 273 ------LEEALRFANAAAALAVTRPGARPSLPTREEVE 304
|
Length = 311 |
| >gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 7e-71
Identities = 124/334 (37%), Positives = 159/334 (47%), Gaps = 43/334 (12%)
Query: 61 PLVVCFGEMLIDFVPTVSGL--SLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
+V GE ID + V GL L +K GGA ANVAV +ARLGG FIGK
Sbjct: 2 TKIVVIGEANIDLIGRVEGLEGELNRVKTVEKGAGGAGANVAVALARLGGEVTFIGK--- 58
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
VG D FG L ++LK+ V+ + D RT LA + + DGE
Sbjct: 59 ----------------VGDDNFGEFLLELLKKEGVDTDYVVIDEDTRTGLALILVDGDGE 102
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 238
R FYR +AD+ + EL L+ A I + L ++ +AAK+ G
Sbjct: 103 RTINFYRGAAADLTPE--ELPEDLLENADILYLSGS-LPLPLPEATLEELIEAAKNGGT- 158
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298
+DPNLR PLW + E + ADI+K +EEE+ LT GE D H
Sbjct: 159 --FDPNLRDPLWADLEVLLE----LLPLADILKPNEEELEALT-GEKINDIEEALAALHK 211
Query: 299 ---NLKLLLVTEGPDGCRYYTKDFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSL 354
+K ++VT G DG D V + KV+ VD TGAGDAFVAG L+ L S
Sbjct: 212 HAKGVKTVVVTLGADGALLVDGDGEVHVPPVPKVKVVDTTGAGDAFVAGFLAGLLAGKS- 270
Query: 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTR 388
L +ALRFANA AL V + GAI +LPT
Sbjct: 271 ------LEEALRFANAVAALVVQKTGAISSLPTL 298
|
This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298 |
| >gnl|CDD|215299 PLN02543, PLN02543, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 7e-57
Identities = 128/383 (33%), Positives = 182/383 (47%), Gaps = 73/383 (19%)
Query: 61 PLVVCFGEMLIDFVPTV-------------SGLSLA-ESPAFKKAPGGAPANVAVGIARL 106
PLV CFG + +FVPTV L + P F +APGG P+NVA+ RL
Sbjct: 126 PLVCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKMLQWDPPEFARAPGGPPSNVAISHVRL 185
Query: 107 GGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGART 166
GG +AF+GK VG D+FG L ++ + V ++FD A+T
Sbjct: 186 GGRAAFMGK-------------------VGDDDFGEELVLMMNKERVQTRAVKFDENAKT 226
Query: 167 ALAF--VTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSA 224
A + + R G+ + + D LL +EL+L+++ +A++FH+ S L + +S
Sbjct: 227 ACSRMKIKFRDGGKMVAETVKEAAEDSLLA-SELNLAVLKEARMFHFNSEVLTSPSMQST 285
Query: 225 HIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 284
A + +K G ++ +D NL LPLW S D+ RE I W ADII++S +E+ FL E
Sbjct: 286 LFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLD-E 344
Query: 285 DPYDDAVVYK---------------------------LFHANLKLLLVTEGPDGCRYYTK 317
D Y+ Y L+H LKLLLVT+G YYT
Sbjct: 345 DYYERKRNYPPQYYAESFEQTKNWRDYYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTP 404
Query: 318 DFSGRVQGLKVEAV-------DATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 370
F G V G E V D TG+GDA VA I+ +L+T + + +D L LRFA A
Sbjct: 405 KFDGVVVG--TEDVLITPFTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVA 462
Query: 371 CGALTVMERGAIPALPTREAVLN 393
G ++ GA+ PT A N
Sbjct: 463 AGIISQWTIGAVRGFPTESATQN 485
|
Length = 496 |
| >gnl|CDD|215521 PLN02967, PLN02967, kinase | Back alignment and domain information |
|---|
Score = 165 bits (418), Expect = 1e-45
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 54/363 (14%)
Query: 61 PLVVCFGEMLIDFVPT--------------VSGLSLAESPAFKKAPGGAPANVAVGIARL 106
PLV CFG FVP+ + F +APGG+ VA+ +A L
Sbjct: 197 PLVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALASL 256
Query: 107 GGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGART 166
GG AF+GK +G D++G + L N V + D T
Sbjct: 257 GGKVAFMGK-------------------LGDDDYGQAMLYYLNVNKVQTRSVCIDGKRAT 297
Query: 167 ALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHI 226
A++ + + G + + P A+ L ++E+++ ++ +AK+F++ + SL+ +S +
Sbjct: 298 AVSTMKIAKRGRLKTTCVK-PCAEDSLSKSEINIDVLKEAKMFYFNTHSLLDPTMRSTTL 356
Query: 227 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL------ 280
A K +K G V+ YD NL LPLW S+++ + I W ADII+++++E+ FL
Sbjct: 357 RAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPT 416
Query: 281 ----TQGEDP-----YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAV 331
T+ D Y VV L+H NLK+L VT G YYTK+ +G V G++ +
Sbjct: 417 EEFDTKDNDKSKFVHYSPEVVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPI 476
Query: 332 -----DATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALP 386
D + +GD VAG++ L+ L+ + L +++A CG + P
Sbjct: 477 TPFTSDMSASGDGIVAGLMRMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFP 536
Query: 387 TRE 389
+E
Sbjct: 537 PKE 539
|
Length = 581 |
| >gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-43
Identities = 96/309 (31%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 84 ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYM 143
+F+ PGG AN AV ARLG A IG VG D FG
Sbjct: 27 LGSSFETGPGGKGANQAVAAARLGARVAMIGA-------------------VGDDAFGDE 67
Query: 144 LADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LS 201
L + L+E ++ + + GA T A +T+ GE + P A+ L A++D L
Sbjct: 68 LLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVV--PGANGELTPADVDAALE 125
Query: 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL 261
LI A + + L E +AA +AA+ AGV + +P P AR
Sbjct: 126 LIAAADV-----LLLQLEIPLETVLAALRAARRAGVTVILNP---AP-------ARPLPA 170
Query: 262 SIWETADIIKISEEEISFLT--QGEDPYDDAVVYKLFHA-NLKLLLVTEGPDGCRYYTKD 318
+ DI+ +E E + LT + D D +L A +K ++VT G G +
Sbjct: 171 ELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGG 230
Query: 319 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378
V KV+AVD TGAGD F+ + + L+ S L +A+RFANA AL+V
Sbjct: 231 EVEHVPAFKVKAVDTTGAGDTFIGALAAALARGLS-------LEEAIRFANAAAALSVTR 283
Query: 379 RGAIPALPT 387
GA P++PT
Sbjct: 284 PGAQPSIPT 292
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292 |
| >gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-41
Identities = 91/313 (29%), Positives = 129/313 (41%), Gaps = 47/313 (15%)
Query: 84 ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYM 143
+F+ PGG AN AV ARLG + IGK VG D FG
Sbjct: 22 HGHSFQIGPGGKGANQAVAAARLGAEVSMIGK-------------------VGDDAFGDE 62
Query: 144 LADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LS 201
L + LK N ++ + T AF+T+ GE + A+ L ++D +
Sbjct: 63 LLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVV--AGANAELTPEDIDAAEA 120
Query: 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL 261
LI ++ I + L E + AAK AK GV + +P P D
Sbjct: 121 LIAESDI-----VLLQLEIPLETVLEAAKIAKKHGVKVILNP---APAIKDLDD------ 166
Query: 262 SIWETADIIKISEEEISFLT--QGEDPYDDAVVYKLFHA-NLKLLLVTEGPDGCRYYTKD 318
+ DII +E E LT + D D + +K +++T G G +KD
Sbjct: 167 ELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKD 226
Query: 319 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378
S + KV+AVD T AGD F L+ S L DA+RFANA A++V
Sbjct: 227 ESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKS-------LEDAIRFANAAAAISVTR 279
Query: 379 RGAIPALPTREAV 391
+GA ++P E V
Sbjct: 280 KGAQSSIPYLEEV 292
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293 |
| >gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 8e-34
Identities = 78/327 (23%), Positives = 126/327 (38%), Gaps = 56/327 (17%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAF------KKAPGGAPANVAVGIARLGGSSAFIGKT 116
V G + D + + S ++ GG+ N AV +A+LG S +
Sbjct: 2 VAVVGHLNYDII--LKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVA-- 57
Query: 117 TLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSD 176
VG D G + + L+E V+ + +R T +AF+ +D
Sbjct: 58 -----------------AVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFIL--TD 98
Query: 177 GEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 236
G+ + Y P A L+ + + L + P I A+ G
Sbjct: 99 GDDNQIAYFYPGAMDELEPNDEADP------DGLADIVHLSSGP---GLIELARELAAGG 149
Query: 237 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296
+ +S+DP LP E + I E ADI+ +++ E L + +A +
Sbjct: 150 ITVSFDPGQELPRLSG-----EELEEILERADILFVNDYEAELL-KERTGLSEAELASG- 202
Query: 297 HANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLL 355
+++++VT GP G + V + V+ VD TGAGDAF AG L L + L
Sbjct: 203 ---VRVVVVTLGPKGAIVFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYDLE 259
Query: 356 QKEDQLRDALRFANACGALTVMERGAI 382
++LR N +L V RGA
Sbjct: 260 -------ESLRLGNLAASLKVERRGAQ 279
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279 |
| >gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-29
Identities = 90/349 (25%), Positives = 133/349 (38%), Gaps = 69/349 (19%)
Query: 63 VVCFGEMLIDFVPTVS------------GLSLAESPAF---------KKAPGGAPANVAV 101
V+ G L+D + V + LA+ K GG+ AN
Sbjct: 4 VLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIR 63
Query: 102 GIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFD 161
G A LGGS+AFIG+ VG D+ G L L+ V+
Sbjct: 64 GAAALGGSAAFIGR-------------------VGDDKLGDFLLKDLRAAGVDTRYQV-Q 103
Query: 162 PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIF---HYGSISLIT 218
P T V + D ER A L +LD SL+ KAK Y L+T
Sbjct: 104 PDGPTGTCAVLVTPDAERTM--CTYLGAANELSPDDLDWSLLAKAKYLYLEGY----LLT 157
Query: 219 EPCKSAHIAAAKAAKDAGVVLS---YDPNLRLPLWPSADKAREGILSIWETADIIKISEE 275
P ++ + AA+ AK+ GV ++ P + + +E +L + DI+ +EE
Sbjct: 158 VPPEAI-LLAAEHAKENGVKIALNLSAPFI-------VQRFKEALLELLPYVDILFGNEE 209
Query: 276 EISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDAT 334
E L + E D KL +++++T+G G V + VE VD
Sbjct: 210 EAEALAEAETTDDLEAALKLLALRCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTN 269
Query: 335 GAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383
GAGDAF G L L+Q E L + +R + A + + G
Sbjct: 270 GAGDAFAGGFLYG------LVQGEP-LEECIRLGSYAAAEVIQQLGPRL 311
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312 |
| >gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 9e-21
Identities = 90/312 (28%), Positives = 132/312 (42%), Gaps = 56/312 (17%)
Query: 91 APGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKE 150
A GG AN AV ARLG AFI C VG D G + L +
Sbjct: 37 AFGGKGANQAVAAARLGADIAFIA-----------------C--VGDDSIGESMRQQLAK 77
Query: 151 NNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFH 210
+ ++ A + G T +A + + +GE + +A + E LI A
Sbjct: 78 DGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHRELIANA---D 134
Query: 211 YGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLPLWPSADKAREGILSIWETAD 268
+ L T P ++ +AAAK AK G V+L+ P LP + +L++ D
Sbjct: 135 ALLMQLET-PLETV-LAAAKIAKQHGTKVILNPAPARELP---------DELLAL---VD 180
Query: 269 IIKISEEEISFLT--QGEDPYDDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKDFSGRVQG 325
II +E E LT + ED D A ++ H ++ +L+T G G RV G
Sbjct: 181 IITPNETEAEKLTGIRVEDDDDAAKAAQVLHQKGIETVLITLGSRGVWLSENGEGQRVPG 240
Query: 326 LKVEAVDATGAGD----AFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381
+V+AVD AGD A V +L L +A+RFA+A A+ V +GA
Sbjct: 241 FRVQAVDTIAAGDTFNGALVTALLEGKP-----------LPEAIRFAHAAAAIAVTRKGA 289
Query: 382 IPALPTREAVLN 393
P++P RE +
Sbjct: 290 QPSIPWREEIDA 301
|
Length = 306 |
| >gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 1e-20
Identities = 79/300 (26%), Positives = 111/300 (37%), Gaps = 61/300 (20%)
Query: 89 KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADIL 148
K PGG NVAV RLG SA+IG VG D+ G + L
Sbjct: 18 KMYPGGNALNVAVYAKRLGHESAYIGA-------------------VGNDDAGAHVRSTL 58
Query: 149 KENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYR-NPSADMLLQEAELDLSLITKAK 207
K V+ + R G A+A V L DG+R F A EA DL +++
Sbjct: 59 KRLGVDISHCRVKEGE-NAVADVELV-DGDRIFGLSNKGGVAREHPFEA--DLEYLSQFD 114
Query: 208 IFH---YGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW 264
+ H Y + + ++ A A +S+D + R +
Sbjct: 115 LVHTGIYSHEGHLEKALQALVGAGAL--------ISFDFSDRWDD-DYLQLVCPYV---- 161
Query: 265 ETADIIKISEEEISFLTQGEDPYDDAVVYKL--FHAN-LKLLLVTEGPDGCRYYTKDFSG 321
+ +F + + D+ V KL + KL++VT G DG Y
Sbjct: 162 -----------DFAFFSASDLS-DEEVKAKLKEAVSRGAKLVIVTRGEDGAIAYDGAVFY 209
Query: 322 RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381
V VE VD GAGD+F+AG L SLL + +A+R A T GA
Sbjct: 210 SVAPRPVEVVDTLGAGDSFIAGFL------LSLLAGGTAIAEAMRQGAQFAAKTCGHEGA 263
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264 |
| >gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 7e-19
Identities = 79/333 (23%), Positives = 118/333 (35%), Gaps = 58/333 (17%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPA----FKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
V+ G ++D + V+ + + GG AN AV +ARLGG + IG
Sbjct: 2 VLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIG---- 57
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
VG D G ++ L V+ + + PGAR+ ++ +T +
Sbjct: 58 ---------------VVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSITDITGDR 102
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV- 237
+ + L L+ A + A+ A+ G+
Sbjct: 103 ATISITAIDTQAAPDSLPDAILGGA---------DAVLVDGRQPEAALHLAQEARARGIP 153
Query: 238 -VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ-GEDPYDDAVVYKL 295
L D + E +L + AD SE FL D+A+ L
Sbjct: 154 IPLDLD--------GGGLRVLEELLPL---ADHAICSEN---FLRPNTGSADDEALEL-L 198
Query: 296 FHANLKLLLVTEGPDGCRYYTKDFS-GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354
+ + VT G GC + +D V VE VD TGAGD F +L
Sbjct: 199 ASLGIPFVAVTLGEAGCLWLERDGELFHVPAFPVEVVDTTGAGDVFHGAFA------HAL 252
Query: 355 LQKEDQLRDALRFANACGALTVMERGAIPALPT 387
+ LR+ALRFA+A AL G LPT
Sbjct: 253 AEGMP-LREALRFASAAAALKCRGLGGRAGLPT 284
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284 |
| >gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 4e-18
Identities = 78/326 (23%), Positives = 122/326 (37%), Gaps = 46/326 (14%)
Query: 71 IDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL 130
+D +P V S F K GG AN AV ++LG A +G
Sbjct: 32 VDRMPQVGETLHGTS--FHKGFGGKGANQAVMASKLGAKVAMVGM--------------- 74
Query: 131 PCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTL-RSDGEREFMFYRNPSA 189
VG D FG K N VN + + + T LA + + G E + P A
Sbjct: 75 ----VGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVII--PGA 128
Query: 190 DMLLQEAELDLSLITKAKIFHYGSISLI-TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP 248
+ L +D I + + E + A K AK+ G ++P P
Sbjct: 129 NNALTPQMVDAQ---TDNIQNICKYLICQNEIPLETTLDALKEAKERGCYTVFNPA---P 182
Query: 249 LWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKL----LL 304
P + I + + ++E E + +T G + D +K +L ++
Sbjct: 183 A-PKLAEVEI-IKPFLKYVSLFCVNEVEAALIT-GMEVTDTESAFKASKELQQLGVENVI 239
Query: 305 VTEGPDGCRYYTKDFSGR-VQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRD 363
+T G +GC K+ V G +V+AVD TGAGD FV + +S L +
Sbjct: 240 ITLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKDLK-------E 292
Query: 364 ALRFANACGALTVMERGAIPALPTRE 389
+ + AN A++V G + P
Sbjct: 293 SCKRANRIAAISVTRHGTQSSYPHPS 318
|
Length = 326 |
| >gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-15
Identities = 70/297 (23%), Positives = 101/297 (34%), Gaps = 64/297 (21%)
Query: 88 FKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADI 147
+++PGG ANVAV +A+LG F + L G DE G +
Sbjct: 31 SRESPGGGGANVAVQLAKLGNDVRFF--SNL-----------------GRDEIGIQSLEE 71
Query: 148 LKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE--AELDLSLITK 205
L+ D R L+F+ +GER D L E D IT
Sbjct: 72 LESGGDKHTVAWRDKPTRKTLSFID--PNGERTITVPGERLEDDLKWPILDEGDGVFIT- 128
Query: 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE 265
+ A K + V+L P +R+ + +
Sbjct: 129 ------AAAVDKE--------AIRKCRETKLVILQVTPRVRV----------DELNQALI 164
Query: 266 TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQG 325
DI+ S + L E K+ + L+VTEG G Y V
Sbjct: 165 PLDILIGSRLDPGELVVAE---------KIAGPFPRYLIVTEGELGAILYPGGRYNHVPA 215
Query: 326 LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 382
K + D+TGAGD+F AG + L +S + +AL CGA+ V G
Sbjct: 216 KKAKVPDSTGAGDSFAAGFIYGLLKGWS-------IEEALELGAQCGAICVSHFGPY 265
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 265 |
| >gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 9e-14
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 226 IAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT--QG 283
+ A + A+ GV + DP + E + + DI+ +EEE LT +
Sbjct: 74 LDALEEARRRGVPVVLDPG-----PRAVRLDGEELEKLLPGVDILTPNEEEAEALTGRRD 128
Query: 284 EDPYDDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFV 341
+ + A L + K+++VT G G T+ V V+ VD TGAGDAF+
Sbjct: 129 LEVKEAAEAAALLLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPVKVVDTTGAGDAFL 188
Query: 342 AGILSQL 348
A + + L
Sbjct: 189 AALAAGL 195
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). Length = 196 |
| >gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 1e-13
Identities = 90/349 (25%), Positives = 134/349 (38%), Gaps = 80/349 (22%)
Query: 63 VVCFGEMLID-FV-PTVSGLSL-AESPAFK-----KAPGGAPANVAVGIARLGGSSAFIG 114
V+ G++++D ++ V +S A P K GGA ANVA +A LG +G
Sbjct: 2 VLVVGDVILDEYLYGDVERISPEAPVPVVKVEREEIRLGGA-ANVANNLASLGAKVTLLG 60
Query: 115 KTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGART-------A 167
VG DE G +L +L++ ++ G+ D G T A
Sbjct: 61 V-------------------VGDDEAGDLLRKLLEKEGIDTDGIV-DEGRPTTTKTRVIA 100
Query: 168 LAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKI-----FHYGSISLITEPCK 222
LR D E + SA+ + E + +A + + G ++T
Sbjct: 101 RNQQLLRVDREDD----SPLSAEEEQRLIERIAERLPEADVVILSDYGKG---VLTPRVI 153
Query: 223 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282
A IAAA+ G+ + DP R S + A ++ +E+E
Sbjct: 154 EALIAAAREL---GIPVLVDPKGR-------------DYSKYRGATLLTPNEKEAREALG 197
Query: 283 GEDPYDD---AVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQ---GLKVEAVDATG 335
E DD A KL NL+ LLVT G +G + +D G VQ L E D TG
Sbjct: 198 DEINDDDELEAAGEKLLELLNLEALLVTLGEEGMTLFERD--GEVQHIPALAKEVYDVTG 255
Query: 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 384
AGD +A + L+ L +A ANA + V + G P
Sbjct: 256 AGDTVIATLALALAAGADLE-------EAAFLANAAAGVVVGKVGTAPV 297
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. Length = 304 |
| >gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 1e-13
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 224 AHIAAAKAAKDAGVVL-SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282
A + A + A V+L + LR L A+ +IK + EE+ L
Sbjct: 147 AQLIAIARKRGAKVILDTSGEALREAL-----AAK---------PFLIKPNHEELEELF- 191
Query: 283 GEDPYDDA----VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGD 338
G + + +L + +LV+ G DG TK+ + + KVE V+ GAGD
Sbjct: 192 GRELKTEEEIIEAARELLDRGAENVLVSLGADGALLVTKEGALKATPPKVEVVNTVGAGD 251
Query: 339 AFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLN 393
+ VAG L+ L+ SL +ALRFA A G+ G LP E V
Sbjct: 252 SMVAGFLAGLARGLSLE-------EALRFAVAAGSAAAFSPGT--GLPDPEDVEE 297
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. Length = 303 |
| >gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 5e-13
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 268 DIIKISEEEISFLTQGEDPYD-DAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 324
+IK + EE+ L E D + +L ++ ++V+ G DG T +
Sbjct: 180 WLIKPNREELEALFGRELTTLEDVIKAARELLAEGIENVIVSLGADGALLVTAEGVYFAS 239
Query: 325 GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG-AIP 383
KV+ V GAGD+ VAG L+ LL+ + L +ALRFA ACGA ++G IP
Sbjct: 240 PPKVQVVSTVGAGDSMVAGFLAG------LLKGKS-LEEALRFAVACGAAAASQKGTGIP 292
Query: 384 ALPTREAVLNAIH 396
L + + +
Sbjct: 293 DLDQLKKIYAQVT 305
|
Length = 310 |
| >gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 4e-12
Identities = 71/307 (23%), Positives = 100/307 (32%), Gaps = 80/307 (26%)
Query: 89 KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADIL 148
K GG NVAV R G I VG D++G L L
Sbjct: 19 KAFSGGNAVNVAVYCTRYGIQPGCITW-------------------VGDDDYGTKLKQDL 59
Query: 149 KENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY-RNPSADMLLQEAELDLSLITKAK 207
V+ + + G TA V L D +R F Y AD L E D + + +
Sbjct: 60 ARMGVDISHVHTKHG-VTAQTQVELH-DNDRVFGDYTEGVMADFALSEE--DYAWLAQYD 115
Query: 208 IFHYGSISLITEPCKSAHIAAAKAA-KDAGVVLSYDPNLRL--PLW----PSADKAREGI 260
I H H A AG + ++D + + PLW P D A
Sbjct: 116 IVHAAIW---------GHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDYA---- 162
Query: 261 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGP------DGCRY 314
+ +A ED + + + +++VT G DG ++
Sbjct: 163 ---FASAP--------------QEDEFLRLKMKAIVARGAGVVIVTLGENGSIAWDGAQF 205
Query: 315 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGAL 374
+ V VD GAGD+F+AG L L A+ AC A
Sbjct: 206 WR---QAPEP---VTVVDTMGAGDSFIAGFLCGWLAG-------MTLPQAMAQGTACAAK 252
Query: 375 TVMERGA 381
T+ GA
Sbjct: 253 TIQYHGA 259
|
Length = 260 |
| >gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 8e-12
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 28/180 (15%)
Query: 224 AHIAAAKAAKDAGVVL-SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282
A + A K A V+L + LR L KA+ +IK ++EE+ L
Sbjct: 147 AELIALAREKGAKVILDTSGEALRDGL-----KAK---------PFLIKPNDEELEELFG 192
Query: 283 GE-DPYDDAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDA 339
E ++ + +L + +L++ G DG TK+ + Q K E V GAGD+
Sbjct: 193 RELKTLEEIIEAARELLDLGAENVLISLGADGALLVTKEGALFAQPPKGEVVSTVGAGDS 252
Query: 340 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPV 399
VAG L+ L + SL +ALR A A G+ G LP E + + V
Sbjct: 253 MVAGFLAGLESGLSLE-------EALRLAVAAGSAAAFSEGT--GLPDPEDI-EELLPQV 302
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). Length = 304 |
| >gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 5e-11
Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 15/220 (6%)
Query: 162 PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221
G + DGER F+ A+ + + +L +E
Sbjct: 84 GGDDGGCLVALVEPDGERSFISI--SGAEQDWSTEWFATLTVAPYDYVYLSGYTLASENA 141
Query: 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281
+ A AG L +DP R+ P + I + EE +
Sbjct: 142 SKVILLEWLEALPAGTTLVFDPGPRISDIPDTILQA-----LMAKRPIWSCNREEAAIFA 196
Query: 282 QGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAF 340
+ DP +A +++ ++V G +G D + + G KV+AVD GAGD
Sbjct: 197 ERGDPAAEASALRIYAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKVKAVDTIGAGDTH 256
Query: 341 VAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 380
G+L+ L+ S L DA+ ANA A+ V G
Sbjct: 257 AGGMLAGLAKGMS-------LADAVLLANAAAAIVVTRSG 289
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 289 |
| >gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 8e-11
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 268 DIIKISEEEISFLTQGEDPYDDAVV---YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 324
+IK + EE+ L ++ V+ KL + +LV+ G DG TKD R
Sbjct: 179 FLIKPNREELEELFGRPLGDEEDVIAAARKLIERGAENVLVSLGADGALLVTKDGVYRAS 238
Query: 325 GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 380
KV+ V GAGD+ VAG ++ L+ SL +ALR A A G+ T G
Sbjct: 239 PPKVKVVSTVGAGDSMVAGFVAGLAQGLSLE-------EALRLAVAAGSATAFSPG 287
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. Length = 289 |
| >gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 84/334 (25%), Positives = 129/334 (38%), Gaps = 69/334 (20%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAES--PA-FKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
+V G ID VSG + + P K++PGG N+A +ARLG S A +
Sbjct: 2 IVVIGAANIDLRGKVSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLS----- 56
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFD--PGARTALAFVTLRSDG 177
VG D G IL+E+ G +R G TA L DG
Sbjct: 57 --------------AVGDDSEGES---ILEESEKAGLNVRGIVFEGRSTASYTAILDKDG 99
Query: 178 EREFMFYRNPSADMLLQEA--ELDLSLIT------KAKIFHYGSISLITEPCKSAHIAAA 229
+ ADM + E L I K + ++ + A
Sbjct: 100 DLVVAL-----ADMDIYELLTPDFLRKIREALKEAKPIVVD-ANLP------EEALEYLL 147
Query: 230 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ--GEDPY 287
A GV ++++P SA K ++ + + D++ + E+ L E+
Sbjct: 148 ALAAKHGVPVAFEP-------TSAPKLKK-LFYLLHAIDLLTPNRAELEALAGALIENNE 199
Query: 288 DDAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQ----GLKVEAVDATGAGDAFVA 342
D+ K+ +K ++VT G G +++ + V+ TGAGDAFVA
Sbjct: 200 DENKAAKILLLPGIKNVIVTLGAKGVLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVA 259
Query: 343 GILSQLSTDFSLLQKEDQLRDALRFANACGALTV 376
G+++ L S L D+LRFA A ALT+
Sbjct: 260 GLVAGLLEGMS-------LDDSLRFAQAAAALTL 286
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288 |
| >gnl|CDD|215195 PLN02341, PLN02341, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 5e-10
Identities = 93/389 (23%), Positives = 134/389 (34%), Gaps = 60/389 (15%)
Query: 32 ASSPLPRLNVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVSGL----------- 80
A + R G + KE V G + +D V V L
Sbjct: 48 ARAGARSRARRRLGDTEVGSAAGKEID----VATLGNLCVDIVLPVPELPPPSREERKAY 103
Query: 81 --SLAESPAFKKA-PGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137
LA SP KK+ G N A+ ARLG + IG HV G
Sbjct: 104 MEELAASPPDKKSWEAGGNCNFAIAAARLGLRCSTIG---------HV----------GD 144
Query: 138 DEFGYMLADILKENNVNGAGM--------RFDPGARTALAFVTLRSDGEREFM----FYR 185
+ +G L D+L E ++ G+ T L +V + F F
Sbjct: 145 EIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGP 204
Query: 186 NPS-ADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPN 244
P+ + + AE +++ +F G + P SA +A A D G + +DP
Sbjct: 205 EPAFSWISKLSAEAKMAIRQSKALFCNGYVFDELSP--SAIASAVDYAIDVGTAVFFDPG 262
Query: 245 LR-LPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLL 303
R L R + + +D++ ++ EE LT +P K +
Sbjct: 263 PRGKSLLVGTPDERRALEHLLRMSDVLLLTSEEAEALTGIRNPILAGQELLRPGIRTKWV 322
Query: 304 LVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRD 363
+V G G T+ KV VD G GD+F A I + L +
Sbjct: 323 VVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIA------LGYIHNL-PLVN 375
Query: 364 ALRFANACGALTVMERGAIPALPTREAVL 392
L ANA GA T M GA + T E VL
Sbjct: 376 TLTLANAVGAATAMGCGAGRNVATLEKVL 404
|
Length = 470 |
| >gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 9e-07
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 303 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362
++VT G GCR Y KD RV VD TGAGD+F+ G ++ L + +
Sbjct: 206 VIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-------VP 258
Query: 363 DALRFANACGALTVMERGAIPALPTR 388
DA N G+L V + G IP R
Sbjct: 259 DAALLGNYFGSLAVEQVG-IPKFDLR 283
|
Length = 335 |
| >gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 68/328 (20%), Positives = 112/328 (34%), Gaps = 76/328 (23%)
Query: 89 KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADIL 148
+ GGA ANVA IA LG +G VG DE G L +L
Sbjct: 44 EDRLGGA-ANVARNIASLGARVFLVG-------------------VVGDDEAGKRLEALL 83
Query: 149 KENNVNGAGMRFDPGARTA--LAFVT-----LRSDGEREFMFYRNPSADMLLQEAELDLS 201
E ++ +G+ D T + LR D E +A++ +
Sbjct: 84 AEEGIDTSGLIRDKDRPTTTKTRVLARNQQLLRVDFEERDPI----NAELEARLLAAIRE 139
Query: 202 LITKAKIF---HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLR---------LPL 249
+ A Y L + AA+ G + DP + L +
Sbjct: 140 QLASADAVVLSDYAKGVLTPRVVQ----EVIAAARKHGKPVLVDPKGKDFSRYRGATL-I 194
Query: 250 WPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGP 309
P+ +A + + A++++ +E+ + +L+ LLVT
Sbjct: 195 TPNRKEAEAAVGACDTEAELVQAAEKLLE------------------ELDLEALLVTRSE 236
Query: 310 DGCRYYTKDFSGR-VQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFA 368
G +T++ + E D TGAGD +A + L+ SL + A R A
Sbjct: 237 KGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALAAGASLEE-------ACRLA 289
Query: 369 NACGALTVMERGAIPALPTREAVLNAIH 396
NA + V + G + + NA+
Sbjct: 290 NAAAGVVVGKLGTATV--SPAELANALQ 315
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 315 |
| >gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 76/314 (24%), Positives = 115/314 (36%), Gaps = 63/314 (20%)
Query: 88 FKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADI 147
+K + GG+ +N V +ARLG SA + V + VG+D G
Sbjct: 121 YKASAGGSLSNTLVALARLGSQSA---------AGPALNVAM--AGSVGSDPLGDFYRTK 169
Query: 148 LKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-SLITKA 206
L+ NV+ G T V D +R + Y+ S+ + L S I+K+
Sbjct: 170 LRRANVHFLSQPVKDGT-TGTVIVLTTPDAQRTMLSYQGTSSTVNYDS---CLASAISKS 225
Query: 207 KIF---HY-----GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 258
++ Y +I I + C+ AH A A A A D + ++ R+
Sbjct: 226 RVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTAS-----DVSC-------IERHRD 273
Query: 259 GILSIWE-TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 317
+ ADI+ + +E L + L+ VT+G G Y
Sbjct: 274 DFWDVMGNYADILFANSDEARALCGLGSEESPESATRYLSHFCPLVSVTDGARGS--YI- 330
Query: 318 DFSGRVQGLKVEA----------VDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367
G+K EA VD GAGDA+ AGIL + LL+ LR
Sbjct: 331 -------GVKGEAVYIPPSPCVPVDTCGAGDAYAAGIL------YGLLRGVSDLRGMGEL 377
Query: 368 ANACGALTVMERGA 381
A A V ++G
Sbjct: 378 AARVAATVVGQQGT 391
|
Length = 426 |
| >gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 308 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367
GPDG ++ + ++V VD GAGD F A ++ ++L + D L +AL F
Sbjct: 228 GPDGEYVHSPAH----KPIRV--VDTLGAGDTFNAAVI------YALNKGPDDLSEALDF 275
Query: 368 ANA 370
N
Sbjct: 276 GNR 278
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. Length = 290 |
| >gnl|CDD|182111 PRK09850, PRK09850, pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 81/334 (24%), Positives = 123/334 (36%), Gaps = 63/334 (18%)
Query: 58 RESPLVVCFGEMLIDFVPTVSGLSLA------ESPA-FKKAPGGAPANVAVGIARLGGSS 110
RE VV G ID V+G S +P K PGG N+A +A LG +
Sbjct: 2 REKDYVVIIGSANID----VAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKA 57
Query: 111 AFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAF 170
+ VG+D +G L ++ V PG T+
Sbjct: 58 WLLSA-------------------VGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYL 98
Query: 171 VTLRSDGE-----REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAH 225
L + GE + +A+ L Q E I +AK+ I C +
Sbjct: 99 SLLDNTGEMLVAINDMNISNAITAEYLAQHREF----IQRAKV--------IVADCNISE 146
Query: 226 IAAAKAAKDAGVVLSY-DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 284
A A +A V + DP + W K R+ + I T ++ E +S +
Sbjct: 147 EALAWILDNAANVPVFVDP---VSAWKCV-KVRDRLNQI-HTLKPNRLEAETLSGIALS- 200
Query: 285 DPYDDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVA 342
D A V FH + L L+++ G DG Y SG +K ++ TGAGDA +A
Sbjct: 201 GREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMA 260
Query: 343 GILSQLSTDFSLLQKEDQLRDALRFANACGALTV 376
G+ S +++RFA C ++ +
Sbjct: 261 GLASCWVDGMPFA-------ESVRFAQGCSSMAL 287
|
Length = 313 |
| >gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 67/308 (21%), Positives = 111/308 (36%), Gaps = 62/308 (20%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
+V G + ID + T PGG ++ ++RLG + + K
Sbjct: 2 IVIIGHVTIDEIVTNGSG--------VVKPGGPATYASLTLSRLGLTVKLVTK------- 46
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
VG D D + NG + T + ++G +
Sbjct: 47 ------------VGRDY-----PDKWSDLFDNGIEVISLLSTETTTFELNYTNEGRTRTL 89
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242
+ +A + E LS IT A+I G + I+ + K A + L D
Sbjct: 90 LAK-CAAIP---DTESPLSTIT-AEIVILGPVPE--------EISPSLFRKFAFISL--D 134
Query: 243 PNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKL 302
L + IL + D++K+S E ++ P + A + K +K
Sbjct: 135 AQGFLRRANQEKLIKCVILKL---HDVLKLSRVEAEVIS---TPTELARLIKET--GVKE 186
Query: 303 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362
++VT+G +G + + + K + VD TGAGD F+A L +S L +D
Sbjct: 187 IIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLAAFL------YSRLSGKDIKE 240
Query: 363 DALRFANA 370
A FA A
Sbjct: 241 -AAEFAAA 247
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 254 |
| >gnl|CDD|237405 PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 269 IIKISEEEISFLTQGEDPYD----DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 324
+IK + EE+S L E D V+ + ++ ++V+ G DG D +V
Sbjct: 180 VIKPNIEELSQLLGKEVSEDLDELKEVLQQPLFEGIEWIIVSLGADGAFAKHNDTFYKVD 239
Query: 325 GLKVEAVDATGAGDAFVAGILSQLS---TDFSLLQKEDQLRDALRFANACGALTVMER 379
K+E V+ G+GD+ VAGI S L D LL+K AN G L E+
Sbjct: 240 IPKIEVVNPVGSGDSTVAGIASGLLHQEDDADLLKK----------ANVLGMLNAQEK 287
|
Length = 309 |
| >gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 21/139 (15%)
Query: 226 IAAAKAAKDAGVVLSYD-------PNLRLPLWPSADKAREGILSIWETADI--IKISEEE 276
AA + AK G+ +S D N R PL L + E+ I +E+E
Sbjct: 194 EAAIRLAKQEGLSVSLDLASFEMVRNFRSPL-----------LQLLESGKIDLCFANEDE 242
Query: 277 ISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATG 335
L +GE D + +VT G GC RV + AVDATG
Sbjct: 243 ARELLRGEQESDPEAALEFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNAVDATG 302
Query: 336 AGDAFVAGILSQLSTDFSL 354
AGD F +G L L SL
Sbjct: 303 AGDLFASGFLYGLIKGLSL 321
|
Length = 367 |
| >gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.002
Identities = 80/311 (25%), Positives = 107/311 (34%), Gaps = 98/311 (31%)
Query: 82 LAESPAFKKAPGGAPAN---VAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138
LA + GGA N VA + ++ G+++++G C +G D
Sbjct: 41 LASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYMG-----------------C--IGKD 81
Query: 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 198
+FG + VN D T V L GER + N SA + L
Sbjct: 82 KFGEEMKKCATAAGVNVHYYE-DESTPTGTCAV-LVVGGERSLV--ANLSAANCYKVEHL 137
Query: 199 DLS----LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP------ 248
L+ KAK ++ L P +S + A AA + + NL P
Sbjct: 138 KKPENWALVEKAKFYYIAGFFLTVSP-ESIMLVAEHAAANNKT---FMMNLSAPFICEFF 193
Query: 249 ------LWPSAD-------KAR-----EGILSIWETADI----IKISE--------EEIS 278
P D +AR +G WET D+ +KIS +
Sbjct: 194 KDQLMEALPYVDFLFGNETEARTFAKVQG----WETEDVEEIALKISALPKASGTHKRTV 249
Query: 279 FLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEA-VDATGAG 337
+TQG DP A K V E P V L E VD GAG
Sbjct: 250 VITQGADPTVVAEDGK----------VKEFP-------------VIPLPKEKLVDTNGAG 286
Query: 338 DAFVAGILSQL 348
DAFV G LSQL
Sbjct: 287 DAFVGGFLSQL 297
|
Length = 332 |
| >gnl|CDD|183085 PRK11316, PRK11316, bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.003
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 20/63 (31%)
Query: 92 PGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKEN 151
PGGA ANVA+ IA LG + +G T G DE L+ +L
Sbjct: 50 PGGA-ANVAMNIASLGAQARLVGLT-------------------GIDEAARALSKLLAAV 89
Query: 152 NVN 154
V
Sbjct: 90 GVK 92
|
Length = 473 |
| >gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 301 KLLLVTEGPDGCRYYTKDFSGRVQGLKVEA---VDATGAGDAFVAGILSQLSTDFSL 354
+L++ T+GP+ TKD V ++ VD GAGDAFV G L+Q + +
Sbjct: 258 RLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDI 314
|
Length = 345 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 400 | |||
| PLN02323 | 330 | probable fructokinase | 100.0 | |
| PLN02543 | 496 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| KOG2855 | 330 | consensus Ribokinase [Carbohydrate transport and m | 100.0 | |
| PLN02967 | 581 | kinase | 100.0 | |
| PLN02341 | 470 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PRK09434 | 304 | aminoimidazole riboside kinase; Provisional | 100.0 | |
| PRK11142 | 306 | ribokinase; Provisional | 100.0 | |
| PTZ00292 | 326 | ribokinase; Provisional | 100.0 | |
| PLN02813 | 426 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| COG0524 | 311 | RbsK Sugar kinases, ribokinase family [Carbohydrat | 100.0 | |
| cd01167 | 295 | bac_FRK Fructokinases (FRKs) mainly from bacteria | 100.0 | |
| cd01168 | 312 | adenosine_kinase Adenosine kinase (AK) catalyzes t | 100.0 | |
| PRK15074 | 434 | inosine/guanosine kinase; Provisional | 100.0 | |
| cd01166 | 294 | KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho | 100.0 | |
| cd01944 | 289 | YegV_kinase_like YegV-like sugar kinase. Found onl | 100.0 | |
| cd01174 | 292 | ribokinase Ribokinase catalyses the phosphorylatio | 100.0 | |
| PRK09850 | 313 | pseudouridine kinase; Provisional | 100.0 | |
| cd01945 | 284 | ribokinase_group_B Ribokinase-like subgroup B. Fou | 100.0 | |
| PTZ00247 | 345 | adenosine kinase; Provisional | 100.0 | |
| PF00294 | 301 | PfkB: pfkB family carbohydrate kinase; InterPro: I | 100.0 | |
| PLN02379 | 367 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01942 | 279 | ribokinase_group_A Ribokinase-like subgroup A. Fou | 100.0 | |
| TIGR02152 | 293 | D_ribokin_bact ribokinase. This model describes ri | 100.0 | |
| PRK09954 | 362 | putative kinase; Provisional | 100.0 | |
| cd01947 | 265 | Guanosine_kinase_like Guanosine kinase-like sugar | 100.0 | |
| cd01940 | 264 | Fructoselysine_kinase_like Fructoselysine kinase-l | 100.0 | |
| cd01939 | 290 | Ketohexokinase Ketohexokinase (fructokinase, KHK) | 100.0 | |
| TIGR03828 | 304 | pfkB 1-phosphofructokinase. This enzyme acts in co | 100.0 | |
| TIGR02198 | 315 | rfaE_dom_I rfaE bifunctional protein, domain I. Rf | 100.0 | |
| cd01172 | 304 | RfaE_like RfaE encodes a bifunctional ADP-heptose | 100.0 | |
| PRK09813 | 260 | fructoselysine 6-kinase; Provisional | 100.0 | |
| PRK13508 | 309 | tagatose-6-phosphate kinase; Provisional | 100.0 | |
| PRK09513 | 312 | fruK 1-phosphofructokinase; Provisional | 100.0 | |
| cd01943 | 328 | MAK32 MAK32 kinase. MAK32 is a protein found prima | 100.0 | |
| cd01941 | 288 | YeiC_kinase_like YeiC-like sugar kinase. Found in | 100.0 | |
| PRK10294 | 309 | 6-phosphofructokinase 2; Provisional | 100.0 | |
| TIGR03168 | 303 | 1-PFK hexose kinase, 1-phosphofructokinase family. | 100.0 | |
| TIGR01231 | 309 | lacC tagatose-6-phosphate kinase. This enzyme is p | 100.0 | |
| PLN02548 | 332 | adenosine kinase | 100.0 | |
| cd01164 | 289 | FruK_PfkB_like 1-phosphofructokinase (FruK), minor | 100.0 | |
| PRK11316 | 473 | bifunctional heptose 7-phosphate kinase/heptose 1- | 100.0 | |
| PLN02630 | 335 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| COG1105 | 310 | FruK Fructose-1-phosphate kinase and related fruct | 100.0 | |
| cd01937 | 254 | ribokinase_group_D Ribokinase-like subgroup D. Fou | 100.0 | |
| cd01946 | 277 | ribokinase_group_C Ribokinase-like subgroup C. Fou | 100.0 | |
| KOG2854 | 343 | consensus Possible pfkB family carbohydrate kinase | 99.98 | |
| COG2870 | 467 | RfaE ADP-heptose synthase, bifunctional sugar kina | 99.97 | |
| KOG2947 | 308 | consensus Carbohydrate kinase [Carbohydrate transp | 99.96 | |
| cd00287 | 196 | ribokinase_pfkB_like ribokinase/pfkB superfamily: | 99.96 | |
| PRK12413 | 253 | phosphomethylpyrimidine kinase; Provisional | 99.81 | |
| cd01173 | 254 | pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla | 99.8 | |
| PRK05756 | 286 | pyridoxamine kinase; Validated | 99.78 | |
| PRK12412 | 268 | pyridoxal kinase; Reviewed | 99.78 | |
| TIGR00097 | 254 | HMP-P_kinase phosphomethylpyrimidine kinase. This | 99.77 | |
| TIGR00687 | 286 | pyridox_kin pyridoxal kinase. ThiD and related pro | 99.77 | |
| cd01169 | 242 | HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim | 99.77 | |
| PRK07105 | 284 | pyridoxamine kinase; Validated | 99.76 | |
| PRK06427 | 266 | bifunctional hydroxy-methylpyrimidine kinase/ hydr | 99.76 | |
| PRK08176 | 281 | pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy | 99.73 | |
| PRK08573 | 448 | phosphomethylpyrimidine kinase; Provisional | 99.73 | |
| PRK12616 | 270 | pyridoxal kinase; Reviewed | 99.7 | |
| PTZ00344 | 296 | pyridoxal kinase; Provisional | 99.61 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 99.56 | |
| PLN02898 | 502 | HMP-P kinase/thiamin-monophosphate pyrophosphoryla | 99.55 | |
| KOG3009 | 614 | consensus Predicted carbohydrate kinase, contains | 99.53 | |
| PLN02978 | 308 | pyridoxal kinase | 99.52 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 99.45 | |
| cd01171 | 254 | YXKO-related B.subtilis YXKO protein of unknown fu | 99.45 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 99.44 | |
| PF08543 | 246 | Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte | 99.43 | |
| cd01170 | 242 | THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T | 99.4 | |
| COG0351 | 263 | ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi | 99.37 | |
| TIGR00196 | 272 | yjeF_cterm yjeF C-terminal region, hydroxyethylthi | 99.32 | |
| COG2240 | 281 | PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe | 99.19 | |
| PRK09355 | 263 | hydroxyethylthiazole kinase; Validated | 99.1 | |
| PTZ00493 | 321 | phosphomethylpyrimidine kinase; Provisional | 99.09 | |
| TIGR00694 | 249 | thiM hydroxyethylthiazole kinase. This model repre | 99.0 | |
| KOG2599 | 308 | consensus Pyridoxal/pyridoxine/pyridoxamine kinase | 98.45 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 98.18 | |
| PRK03979 | 463 | ADP-specific phosphofructokinase; Provisional | 97.94 | |
| PRK14039 | 453 | ADP-dependent glucokinase; Provisional | 97.87 | |
| PF02110 | 246 | HK: Hydroxyethylthiazole kinase family; InterPro: | 97.86 | |
| TIGR02045 | 446 | P_fruct_ADP ADP-specific phosphofructokinase. Phos | 97.77 | |
| PRK14038 | 453 | ADP-dependent glucokinase; Provisional | 97.58 | |
| PRK10565 | 508 | putative carbohydrate kinase; Provisional | 97.54 | |
| COG2145 | 265 | ThiM Hydroxyethylthiazole kinase, sugar kinase fam | 97.43 | |
| PF04587 | 444 | ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco | 97.43 | |
| PF01256 | 242 | Carb_kinase: Carbohydrate kinase; InterPro: IPR000 | 97.32 | |
| KOG3974 | 306 | consensus Predicted sugar kinase [Carbohydrate tra | 96.92 | |
| cd01938 | 445 | ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and | 96.75 | |
| COG0063 | 284 | Predicted sugar kinase [Carbohydrate transport and | 96.61 | |
| PRK10076 | 213 | pyruvate formate lyase II activase; Provisional | 85.71 |
| >PLN02323 probable fructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-51 Score=399.90 Aligned_cols=322 Identities=80% Similarity=1.267 Sum_probs=283.3
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.++++|+++|++++|++..+++.+......+...+||++.|+|++|+|||.++.++|. +|+
T Consensus 8 ~~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~ 68 (330)
T PLN02323 8 AESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGK-------------------VGD 68 (330)
T ss_pred CCCCcEEEechhhhhhccCCCCCCcccccceeecCCChHHHHHHHHHhcCCceeEEEE-------------------ecC
Confidence 4567899999999999998877776666777899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++.+.++.+|+.+++.++++|+|++.+++..+++..+++++++.+.++.++++|++++...
T Consensus 69 D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (330)
T PLN02323 69 DEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLDLIRKAKIFHYGSISLI 148 (330)
T ss_pred ChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCChHHHccCCEEEEechhcc
Confidence 99999999999999999999999888899999999998999999888666676678888887778899999999887665
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
.+.......++++.+++.|+++++|++++...|.+.+..++.+.++++++|++++|++|+..+++....+.++.. +++.
T Consensus 149 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~-~~~~ 227 (330)
T PLN02323 149 TEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDTVV-KLWH 227 (330)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCccHHHHH-HHHh
Confidence 555556677889999999999999999988888777777788888999999999999999999987655443444 5556
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++...+++++++|+++|+++|+++|+
T Consensus 228 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al~~a~a~Aa~~v~ 307 (330)
T PLN02323 228 PNLKLLLVTEGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACGAITTT 307 (330)
T ss_pred cCCCEEEEecCCCceEEEeCCCceEeCCccCCCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999998877899999999999999999999999999999986333345689999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHhCCC
Q 015777 378 ERGAIPALPTREAVLNAIHAPV 399 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~~~l~~~~ 399 (400)
+.|+..++|+++++++++++-+
T Consensus 308 ~~g~~~~~~~~~~v~~~l~~~~ 329 (330)
T PLN02323 308 ERGAIPALPTKEAVLKLLKKAV 329 (330)
T ss_pred ccCCccCCCCHHHHHHHHHHhc
Confidence 9999888999999999988754
|
|
| >PLN02543 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-49 Score=399.20 Aligned_cols=319 Identities=38% Similarity=0.621 Sum_probs=264.9
Q ss_pred CCcEEEEccceeecccCcCCCCc--c------------CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccce
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSL--A------------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~--~------------~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~ 125 (400)
++.|+|||++++|++........ . +...+...+||+++|+|++++|||.++.++|.
T Consensus 125 ~~~v~~~Ge~liDf~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~GGa~aNVAvaLARLG~~vafIG~---------- 194 (496)
T PLN02543 125 PPLVCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKMLQWDPPEFARAPGGPPSNVAISHVRLGGRAAFMGK---------- 194 (496)
T ss_pred CCeEEEeChhhhhhcCCCcccccccccccccccccccccCCeeEeccCcHHHHHHHHHHHCCCCEEEEEE----------
Confidence 45699999999999986432111 0 45678899999999999999999999999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEc--CCCCeeEEEecCCCccccCCccccchhhc
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR--SDGEREFMFYRNPSADMLLQEAELDLSLI 203 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~--~~g~r~~~~~~~~~~~~~l~~~~l~~~~i 203 (400)
||+|.+|+++++.|+++||+++++.+.++.+|+.+++.++ .+| +.+.+++..+++..+..++++.+.+
T Consensus 195 ---------VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~g-r~~~~~~~~gA~~~L~~~di~~~~l 264 (496)
T PLN02543 195 ---------VGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGG-KMVAETVKEAAEDSLLASELNLAVL 264 (496)
T ss_pred ---------eCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCC-CEEEEecCCCHHHhCChhhcCHhHh
Confidence 9999999999999999999999999998889999999885 445 5565445566777888888888889
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCC
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 283 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~ 283 (400)
++++++|++++.+..++..+...++++.+++.|++|+||+++|+.+|.+.+..++.+.++++++||+++|++|++.|+|.
T Consensus 265 ~~a~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~ 344 (496)
T PLN02543 265 KEARMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDE 344 (496)
T ss_pred CCCceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCC
Confidence 99999999998776666678889999999999999999999999999887778888889999999999999999999986
Q ss_pred CC--------Cc------------------HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccc-----cccccC
Q 015777 284 ED--------PY------------------DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL-----KVEAVD 332 (400)
Q Consensus 284 ~~--------~~------------------~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~-----~v~vvD 332 (400)
.. +. ..+.+..++..|++.||||+|++|++++.++....++.. +..+||
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~~~~VD 424 (496)
T PLN02543 345 DYYERKRNYPPQYYAESFEQTKNWRDYYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLITPFTCD 424 (496)
T ss_pred CcccccccccchhhhhhhhhhhcccccccCCHHHHHHHHHCCCCEEEEEcCCCcEEEEECCCcccccccccccCCCCCcC
Confidence 41 00 112345677789999999999999999986432222211 122589
Q ss_pred CCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 333 ATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 333 ttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
||||||+|+|||+++|+++.....+++++++|++||+++||++|++.|+.+++|++++|+++++++
T Consensus 425 TTGAGDAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev~~~~~~~ 490 (496)
T PLN02543 425 RTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTESATQNLKEQV 490 (496)
T ss_pred CCchHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhh
Confidence 999999999999999996322222223399999999999999999999999999999999999885
|
|
| >KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-50 Score=377.04 Aligned_cols=316 Identities=56% Similarity=0.897 Sum_probs=290.5
Q ss_pred CCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
.+++.|+|||++++|+++.+++.|.+ +++.+...+||+++|+|++++|||.++.+||+
T Consensus 7 ~~~~~vv~fGs~~~D~V~~~~~~p~~ge~~~~~~f~~~~GG~~aN~AvaaarLG~~~afiGk------------------ 68 (330)
T KOG2855|consen 7 GEPPLVVVFGSMLIDFVPSTRRLPNAGETWEPPGFKTAPGGKGANQAVAAARLGGRVAFIGK------------------ 68 (330)
T ss_pred cCCceEEEeccceeeeeeccccCCCccccccCCcceecCCCcchhhhhHHHhcCcceeeeec------------------
Confidence 45678999999999999999999988 78999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS 213 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~ 213 (400)
||+|.||+.+++.|+++||+++++..+++.+|+.+.+.+..+|++.++++++++.++.+.+.++..+.++.++++|+.+
T Consensus 69 -vGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~~~~~i~~ak~~~~q~ 147 (330)
T KOG2855|consen 69 -VGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSELNLEVIKEAKVFHCQS 147 (330)
T ss_pred -ccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccccHHHHhhccEEEEee
Confidence 9999999999999999999999999999999999999999999999999998888888888888889999999999998
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHH
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 293 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 293 (400)
..+.....+......++.+++.+..+++||+.+.++|++....+..+..++..+|++..+++|+..++|... ++..
T Consensus 148 ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~---~~~~- 223 (330)
T KOG2855|consen 148 EILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIED---DKIL- 223 (330)
T ss_pred ecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCcc---chHH-
Confidence 887777777666666888999999999999999999998777777788899999999999999999999833 2334
Q ss_pred HHHhCCCcEEEEEecCCcEEEEeCCceE-EEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 294 KLFHANLKLLLVTEGPDGCRYYTKDFSG-RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 294 ~l~~~g~~~vvvT~G~~G~~~~~~~~~~-~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
.|++.+.+.||||+|++||+||+++... ++|+.+|++||||||||+|+|||+.+|.+| ++.. ...+++++++|++++
T Consensus 224 ~L~~~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V~~VDtTGAGDsFvgal~~~L~~~-~~~~-~~~L~~~l~~A~a~~ 301 (330)
T KOG2855|consen 224 KLWHMKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKVKAVDTTGAGDSFVGALAVQLVRG-SLLP-ELSLEEALRFANACG 301 (330)
T ss_pred HHhccCCCEEEEEeCCCceEEEecCCCCCCCCCcccccccCCCchHHHHHHHHHHHhhc-cccc-hHHHHHHHHHHHHhh
Confidence 8888888999999999999999998666 999999999999999999999999999999 6544 778999999999999
Q ss_pred HHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 373 ALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 373 a~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++++++|+++++|+++++++.+..-
T Consensus 302 ai~v~~~Ga~~s~p~~~~~~~~~~~~ 327 (330)
T KOG2855|consen 302 AITVQRKGAIPSMPTEKEVQSLLKSS 327 (330)
T ss_pred hHHhhccCCCccCccHHHHHHHhhhc
Confidence 99999999999999999999987654
|
|
| >PLN02967 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=395.92 Aligned_cols=316 Identities=31% Similarity=0.558 Sum_probs=265.9
Q ss_pred CCcEEEEccceeecccCcCCCC--------------ccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccce
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLS--------------LAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~--------------~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~ 125 (400)
.+.|+|||++++|+++...... ..+...+...+||++.|+|++|+|||.++.|+|.
T Consensus 196 ~~~V~~iGe~l~D~~p~g~~~~~l~~~~~~~~~~~~~s~~~~~~~~~GGa~aNVAvaLARLG~~v~fIg~---------- 265 (581)
T PLN02967 196 PPLVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALASLGGKVAFMGK---------- 265 (581)
T ss_pred CCeEEEECchhheecccCccchhhhhccccccccccccCccceeeecCcHHHHHHHHHHHCCCCEEEEEE----------
Confidence 4569999999999987422110 0135667888999999999999999999999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCC
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITK 205 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~ 205 (400)
||+|.+|+++++.|+++||++++++..++.+|+.+++.++++|++.+.+ +.++++..+..++++.+.+.+
T Consensus 266 ---------VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~-~~~gAd~~L~~~di~~~~l~~ 335 (581)
T PLN02967 266 ---------LGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTC-VKPCAEDSLSKSEINIDVLKE 335 (581)
T ss_pred ---------eCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEE-ecCChhhhCChhhcCHhHhcC
Confidence 9999999999999999999999999988889999999999999988753 346777888888888788899
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED 285 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~ 285 (400)
++++|++++.+..+.....+.++++.++++|++|+||+|+|..+|.+.+.+++.+.++++++|||++|++|+..|+|...
T Consensus 336 A~i~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~ 415 (581)
T PLN02967 336 AKMFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEP 415 (581)
T ss_pred CCEEEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCc
Confidence 99999999876666667889999999999999999999999999987777778888999999999999999999998643
Q ss_pred Cc---------------HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCc---eEEEcccccc--ccCCCCchHHHHHHHH
Q 015777 286 PY---------------DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDF---SGRVQGLKVE--AVDATGAGDAFVAGIL 345 (400)
Q Consensus 286 ~~---------------~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~---~~~vpa~~v~--vvDttGAGDaF~Agfl 345 (400)
.. ..+.+..++..|++.|+||+|++|++++.++. ...+++++++ +||||||||+|+|||+
T Consensus 416 ~~e~~~~~~~~~~~~~~~~e~a~~l~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V~vVDTTGAGDAF~AGfL 495 (581)
T PLN02967 416 TEEFDTKDNDKSKFVHYSPEVVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLM 495 (581)
T ss_pred cccccccccchhccccchHHHHHHHHhCCCCEEEEEECccceEEEECCCceeEeeccCCCCCCCCCCCCchhHHHHHHHH
Confidence 11 12345567778999999999999999998764 3344556666 5999999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
++|+++..+....+++++|++||+++||++++..|+++++|++++|++..
T Consensus 496 ~~Ll~g~~~~~g~~~LeeaLrfAnAaAAL~vt~~GA~~glPt~~eV~~~~ 545 (581)
T PLN02967 496 RMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFPPKEDMEDEV 545 (581)
T ss_pred HHHHhccCcccccccHHHHHHHHHHHHHHHhccCCCccCCCCHHHHhhhc
Confidence 99998522111123499999999999999999999999999999997654
|
|
| >PLN02341 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-48 Score=391.58 Aligned_cols=311 Identities=25% Similarity=0.315 Sum_probs=255.9
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCC---------------CCceecCCChHHHHHHHHHHcCCCceeeecccccccc
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAES---------------PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~---------------~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~ 122 (400)
.++++|+++|++++|++..+++.|.... ......+|| ++|+|++|++||.++.++|.
T Consensus 70 ~~~~~vl~lG~~~vD~i~~V~~lP~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvAvaLarLG~~v~lig~------- 141 (470)
T PLN02341 70 GKEIDVATLGNLCVDIVLPVPELPPPSREERKAYMEELAASPPDKKSWEAGG-NCNFAIAAARLGLRCSTIGH------- 141 (470)
T ss_pred cccccEEEECCcceeEEEecCCCCCCCHHHHHHHHHhhcccccccceecCCh-HHHHHHHHHHcCCCeEEEEE-------
Confidence 4557899999999999999998876532 234455788 68999999999999999999
Q ss_pred cceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecC--------CCCceEEEEEEcCCCCeeEEEecCCCcccc--
Q 015777 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDP--------GARTALAFVTLRSDGEREFMFYRNPSADML-- 192 (400)
Q Consensus 123 ~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~--------~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~-- 192 (400)
||+|.+|+++++.|+++||+++++...+ +..|+.++++++++|++.+....+......
T Consensus 142 ------------VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~~~~ 209 (470)
T PLN02341 142 ------------VGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFS 209 (470)
T ss_pred ------------ecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeeccccccccchh
Confidence 9999999999999999999999887665 357999999999999886543211111100
Q ss_pred -CC-ccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC-CCCChHHHHHhHHhhhccCcE
Q 015777 193 -LQ-EAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP-LWPSADKAREGILSIWETADI 269 (400)
Q Consensus 193 -l~-~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~~~~~~~~~ll~~~dv 269 (400)
+. ......+.++++|++|++++... +.+.+.+.++++.+++.|+++++|++++.. +|...+..++.+.++++++|+
T Consensus 210 ~~~~l~~~~~~~l~~adiv~lsg~~~~-~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Di 288 (470)
T PLN02341 210 WISKLSAEAKMAIRQSKALFCNGYVFD-ELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDV 288 (470)
T ss_pred hhhcccHHHHhhhhcCCEEEEeceeCC-cCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCE
Confidence 00 00111356889999999887542 345677889999999999999999987643 344444445567889999999
Q ss_pred EEcCHhHHhcccCCCCCcHHHHHHHHHhCC--CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 270 IKISEEEISFLTQGEDPYDDAVVYKLFHAN--LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 270 l~~N~~E~~~l~~~~~~~~~~~~~~l~~~g--~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
+++|++|++.++|... .++.++.++..+ .+.||||+|++|++++++++.+++|++++++||||||||+|+|||+++
T Consensus 289 l~~Ne~Ea~~l~g~~~--~~~a~~~l~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v~vVDTtGAGDaF~Agfl~g 366 (470)
T PLN02341 289 LLLTSEEAEALTGIRN--PILAGQELLRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIALG 366 (470)
T ss_pred EEecHHHHHHHhCCCC--HHHHHHHHHhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCcCCCCCcCccHHHHHHHHHH
Confidence 9999999999998743 456777777776 589999999999999999988999999999999999999999999999
Q ss_pred HHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 348 LSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 348 l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|++ +++|+++|+++||++++..|+..++|++++++++|.+.
T Consensus 367 ll~G~~-------l~eal~~A~a~aA~~v~~~Ga~~~~p~~~ev~~~l~~~ 410 (470)
T PLN02341 367 YIHNLP-------LVNTLTLANAVGAATAMGCGAGRNVATLEKVLELLRAS 410 (470)
T ss_pred HHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHHhc
Confidence 999999 99999999999999999999999999999999988764
|
|
| >PRK09434 aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=360.32 Aligned_cols=302 Identities=40% Similarity=0.656 Sum_probs=260.0
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+++|+++|++++|+++.. .......+||++.|+|++|++||.++.+++. +|+|
T Consensus 1 ~~~~il~iG~~~iD~~~~~-------~~~~~~~~GG~~~N~a~~l~~LG~~~~~v~~-------------------vG~D 54 (304)
T PRK09434 1 MMNKVWVLGDAVVDLIPEG-------ENRYLKCPGGAPANVAVGIARLGGESGFIGR-------------------VGDD 54 (304)
T ss_pred CCCcEEEecchheeeecCC-------CCceeeCCCChHHHHHHHHHHcCCCceEEEE-------------------ecCc
Confidence 3458999999999998541 1345678999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccC
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT 218 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~ 218 (400)
.+|+++++.|+++||+++++...++.+|+.+++.++++|+|++.+...+++...++.++++ .+++++++|++++....
T Consensus 55 ~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 132 (304)
T PRK09434 55 PFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP--PFRQGEWLHLCSIALSA 132 (304)
T ss_pred hHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh--hhcCCCEEEEccccccC
Confidence 9999999999999999999988888899999999988899998766555555555555553 36789999999876655
Q ss_pred chhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh-
Q 015777 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH- 297 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~- 297 (400)
+..+....++++.++++|+++++|++.+...|...+.+++.+.++++++|++++|++|+..+++... .+++++.+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~~~--~~~~~~~l~~~ 210 (304)
T PRK09434 133 EPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGTSQ--LEDAIYALADR 210 (304)
T ss_pred chHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCCCC--HHHHHHHHHhh
Confidence 5556677788999999999999999988888877777788888899999999999999999998653 4567777776
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.+++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++. .++.++++|+++|+++|+++++
T Consensus 211 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~f~ag~~~~l~~g~~~-~~~~~~~~a~~~a~~~Aa~~v~ 289 (304)
T PRK09434 211 YPIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAGLSQAGLW-TDEAELAEIIAQAQACGALATT 289 (304)
T ss_pred cCCcEEEEEecCCceEEEeCCceeEeCCCCCCCCcCCCchHHHHHHHHHHHHcCCCc-cchHHHHHHHHHHHHHHHHHHc
Confidence 689999999999999999988889999999999999999999999999999999732 2334599999999999999999
Q ss_pred ccCCCCCCCCHHHH
Q 015777 378 ERGAIPALPTREAV 391 (400)
Q Consensus 378 ~~G~~~~~p~~~~l 391 (400)
+.|+..++|+++++
T Consensus 290 ~~g~~~~~~~~~~~ 303 (304)
T PRK09434 290 AKGAMTALPNRQEL 303 (304)
T ss_pred ccCCcCCCCChHHc
Confidence 99998889998775
|
|
| >PRK11142 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-46 Score=357.46 Aligned_cols=293 Identities=28% Similarity=0.364 Sum_probs=252.8
Q ss_pred CcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
++|+|+|++++|++..+++.|.. ........+||++.|+|++|++||.++.++|. +|
T Consensus 3 ~~i~~iG~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~~~~-------------------vG 63 (306)
T PRK11142 3 GKLVVLGSINADHVLNLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIAC-------------------VG 63 (306)
T ss_pred CcEEEECCceeeEEEEeCCCCCCCCeeEeccceecCCCcHHHHHHHHHhcCCcEEEEEE-------------------EC
Confidence 46999999999999988887654 24566788999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEEccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSI 214 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~~~~ 214 (400)
+|.+|+.+++.|+++||+++++...++.+|+.+++.++.+|+|++.++. +....+++++++. +.+.+++++|+.+.
T Consensus 64 ~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~~~ 141 (306)
T PRK11142 64 DDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHA--GANAALTPALVEAHRELIANADALLMQLE 141 (306)
T ss_pred CChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeC--CccccCCHHHHHHHHhhhccCCEEEEeCC
Confidence 9999999999999999999999888888999999999989999988773 4555566666642 56889999998642
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAV 291 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~ 291 (400)
.+.+...++++.++++|+++++|++.... ...++++++|++++|++|++.+++....+. .+.
T Consensus 142 -----~~~~~~~~~~~~a~~~g~~v~~d~~~~~~----------~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~ 206 (306)
T PRK11142 142 -----TPLETVLAAAKIAKQHGTKVILNPAPARE----------LPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKA 206 (306)
T ss_pred -----CCHHHHHHHHHHHHHcCCEEEEECCCCcc----------cCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHH
Confidence 23467778899999999999999974322 123477899999999999999998654332 345
Q ss_pred HHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 292 VYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 292 ~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
++.+.+.|++.+|||+|++|++++.+++.+++|+++++++|||||||+|.|||++++++|++ +++|+++|+++
T Consensus 207 ~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g~~-------~~~al~~a~~~ 279 (306)
T PRK11142 207 AQVLHQKGIETVLITLGSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKP-------LPEAIRFAHAA 279 (306)
T ss_pred HHHHHHhCCCeEEEEECCCcEEEEeCCcceeccCCCcccccCCCchhHHHHHHHHHHHCCCC-------HHHHHHHHHHH
Confidence 57777889999999999999999988888899999999999999999999999999999999 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 372 GALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
|+++|++.|+.+++|+++++++++.
T Consensus 280 Aa~~~~~~G~~~~~~~~~~~~~~~~ 304 (306)
T PRK11142 280 AAIAVTRKGAQPSIPWREEIDAFLQ 304 (306)
T ss_pred HHHHcCCCcccccCCCHHHHHHHHh
Confidence 9999999999888899999988765
|
|
| >PTZ00292 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=358.74 Aligned_cols=301 Identities=26% Similarity=0.342 Sum_probs=255.3
Q ss_pred CCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
+.+++|+|+|++++|++..+++.|.. ....+...+||.+.|+|++|+|||.++.++|.
T Consensus 13 ~~~~~vlviG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~is~------------------ 74 (326)
T PTZ00292 13 EAEPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGM------------------ 74 (326)
T ss_pred CCCCCEEEEccceeeEEEecCCCCCCCCceeecCceeCCCCcHHHHHHHHHHcCCCeEEEEE------------------
Confidence 45678999999999999998887654 23456788999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEc-CCCCeeEEEecCCCccccCCccccch--hhcCC-ccEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR-SDGEREFMFYRNPSADMLLQEAELDL--SLITK-AKIF 209 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~-~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~-~~~v 209 (400)
+|+|.+|+.+++.|+++||+++++...++.+|+.++++++ .+|+|+++++ +++...++++.++. ..+.. ++++
T Consensus 75 -vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~i~~~~~~~ 151 (326)
T PTZ00292 75 -VGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVII--PGANNALTPQMVDAQTDNIQNICKYL 151 (326)
T ss_pred -ECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEe--CCccccCCHHHHHHHHHHhhhhCCEE
Confidence 9999999999999999999999998888889999999998 7899998877 34555667666653 34666 8888
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH-
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD- 288 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~- 288 (400)
++.+. .+.+...++++.++++|+++++|++++...|. .+.+.++++++|++++|++|++.+++....+.
T Consensus 152 ~~~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~ 221 (326)
T PTZ00292 152 ICQNE-----IPLETTLDALKEAKERGCYTVFNPAPAPKLAE-----VEIIKPFLKYVSLFCVNEVEAALITGMEVTDTE 221 (326)
T ss_pred EECCC-----CCHHHHHHHHHHHHHcCCEEEEECCCCccccc-----cccHHHHHhcCCEEcCCHHHHHHHhCCCCCChh
Confidence 77541 23456778889999999999999987654332 25567788899999999999999998754322
Q ss_pred --HHHHHHHHhCCCcEEEEEecCCcEEEEeCCc-eEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHH
Q 015777 289 --DAVVYKLFHANLKLLLVTEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 365 (400)
Q Consensus 289 --~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~-~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al 365 (400)
.+..+.+.+.+++.|+||+|++|++++.+++ .+++|++++++||||||||+|+|||++++++|++ +++|+
T Consensus 222 ~~~~~~~~l~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al 294 (326)
T PTZ00292 222 SAFKASKELQQLGVENVIITLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKD-------LKESC 294 (326)
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCCcEEEEeCCCceEEccCCccccCCCcchHHHHHHHHHHHHHCCCC-------HHHHH
Confidence 2445677788999999999999999998765 4899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 366 RFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
++|+++|++++++.|+...+|+++++++.++
T Consensus 295 ~~a~a~Aa~~v~~~G~~~~~~~~~~~~~~~~ 325 (326)
T PTZ00292 295 KRANRIAAISVTRHGTQSSYPHPSELPADVK 325 (326)
T ss_pred HHHHHHHHHHcCCCCccccCCCHHHHHHHhc
Confidence 9999999999999999988999999988765
|
|
| >PLN02813 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=368.69 Aligned_cols=306 Identities=23% Similarity=0.248 Sum_probs=255.1
Q ss_pred CCCCcEEEEccceeecccCcCC-------CCccC-----------------CCCceecCCChHHHHHHHHHHcC------
Q 015777 58 RESPLVVCFGEMLIDFVPTVSG-------LSLAE-----------------SPAFKKAPGGAPANVAVGIARLG------ 107 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~-------~~~~~-----------------~~~~~~~~GG~~~N~A~~larLG------ 107 (400)
.++++|+++|++++|++..+++ .|+.. ...+...+||++.|+|++|+|||
T Consensus 67 ~~~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~AvalarLG~~~~~~ 146 (426)
T PLN02813 67 PERWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVALARLGSQSAAG 146 (426)
T ss_pred CCcceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHHHHhccccccC
Confidence 4678999999999999999887 55422 33567889999999999999999
Q ss_pred --CCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEec
Q 015777 108 --GSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYR 185 (400)
Q Consensus 108 --~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~ 185 (400)
.++.++|. ||+|.+|+++++.|++.||++.++.+ .+.+|+.+++.++++|+|+++.++
T Consensus 147 ~~~~v~~ig~-------------------VG~D~~G~~i~~~L~~~GVd~~~~~~-~~~~Tg~~~ilv~~~gertii~~~ 206 (426)
T PLN02813 147 PALNVAMAGS-------------------VGSDPLGDFYRTKLRRANVHFLSQPV-KDGTTGTVIVLTTPDAQRTMLSYQ 206 (426)
T ss_pred CCCcEEEEEE-------------------eCCChHHHHHHHHHHHcCCcccceec-CCCCceEEEEEEcCCCCceeeecc
Confidence 79999999 99999999999999999999998765 455899999999999999999885
Q ss_pred CCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHh-HHhhh
Q 015777 186 NPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREG-ILSIW 264 (400)
Q Consensus 186 ~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~-~~~ll 264 (400)
+ ++..++.+++..+.+++++++|+.++....+...+.+.++++.++++|+++++|+..... ....++. +..++
T Consensus 207 G--a~~~l~~~~~~~~~i~~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~----~~~~~~~l~~~ll 280 (426)
T PLN02813 207 G--TSSTVNYDSCLASAISKSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSC----IERHRDDFWDVMG 280 (426)
T ss_pred C--chhhCCccccCHHHHhcCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcch----hhhhHHHHHHHHH
Confidence 4 444566656666788999999998865433334567888999999999999999864211 1112222 33456
Q ss_pred ccCcEEEcCHhHHhcccCCCCC-cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHH
Q 015777 265 ETADIIKISEEEISFLTQGEDP-YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAG 343 (400)
Q Consensus 265 ~~~dvl~~N~~E~~~l~~~~~~-~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Ag 343 (400)
+++|++++|++|++.|++.... +.+++.+.+ ..+++.||||+|++|++++.+++.+++|++++++||||||||+|+||
T Consensus 281 ~~vDil~~Ne~Ea~~l~g~~~~~~~~~a~~~L-~~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v~vVDTtGAGDAF~Ag 359 (426)
T PLN02813 281 NYADILFANSDEARALCGLGSEESPESATRYL-SHFCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAG 359 (426)
T ss_pred hcCCEEEeCHHHHHHHhCCCCCCCHHHHHHHH-HcCCCEEEEEeCCCCeEEEECCEEEEeCCCCCCcccCCChHHHHHHH
Confidence 8999999999999999986432 234444444 57899999999999999999998999999999999999999999999
Q ss_pred HHHHHHcCC-ccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 344 ILSQLSTDF-SLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 344 fl~~l~~g~-~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
|++++++|+ + +++|+++|+++|+++|++.|++.++|+.+++.+.+..
T Consensus 360 fl~~l~~G~~~-------l~~al~~A~a~Aa~~v~~~Ga~~~~~~~~e~~~~~~~ 407 (426)
T PLN02813 360 ILYGLLRGVSD-------LRGMGELAARVAATVVGQQGTRLRVEDAVELAESFAL 407 (426)
T ss_pred HHHHHHcCCCC-------HHHHHHHHHHHHHHHHcccCCCcCHHHHHHHHHHHHH
Confidence 999999999 8 9999999999999999999999999999999887764
|
|
| >COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=351.00 Aligned_cols=301 Identities=41% Similarity=0.575 Sum_probs=262.1
Q ss_pred cEEEEccceeecccC-cCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 62 LVVCFGEMLIDFVPT-VSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 62 ~v~viG~~~vD~~~~-~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+|+++|++++|++.. .+..|.. ........+||++.|+|++++|||.++.++|. ||
T Consensus 1 ~v~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~~a~lG~~~~~~~~-------------------vG 61 (311)
T COG0524 1 DVVVIGEANVDLIAQVVDRLPEPGETVLGDFFKVAGGGKGANVAVALARLGAKVALIGA-------------------VG 61 (311)
T ss_pred CEEEECchhhheehhhccCCCCCcccccccceeecCCchHHHHHHHHHHcCCceEEEEE-------------------ec
Confidence 489999999999996 4444433 22336788999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+|.+|+++++.|++.||+++++....+.+|+.+++.++++|+|.+.+++.. +...+.+++++++.+..++++|++++.+
T Consensus 62 ~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~l 140 (311)
T COG0524 62 DDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGA-AALLLTPEDLDEDELAGADVLHISGIQL 140 (311)
T ss_pred CcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcCCCceeEEEECCc-ccccCChHHcChHHHhhcCeeeEEEeec
Confidence 999999999999999999999999888899999999999999999998665 6666888888777888999999998865
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
...+ +...++++.++++|+++++|++++...|. .+.+.++++++|++++|++|++.+++. ..+..+..+.++
T Consensus 141 ~~~~--~~~~~~~~~a~~~g~~v~~d~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~-~~~~~~~~~~~~ 212 (311)
T COG0524 141 EIPP--EALLAALELAKAAGVTVSFDLNPRPALWD-----RELLEELLALADILFPNEEEAELLTGL-EEDAEAAAALLL 212 (311)
T ss_pred CCCh--HHHHHHHHHHHHcCCeEEEecCCCccccc-----hhhHHHHHhhCCEEeCCHHHHHHHhCC-CccHHHHHHHHh
Confidence 4433 78889999999999999999999988775 566777899999999999999999997 222333335677
Q ss_pred hCCCcEEEEEecCCcEEEEeCCc---eEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTKDF---SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~~~---~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
..+++.+++|+|++|+++++++. ....+++++++||||||||+|.|||++++++|++ +++|+++|+++|+
T Consensus 213 ~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~-------~~~a~~~a~a~aa 285 (311)
T COG0524 213 AKGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-------LEEALRFANAAAA 285 (311)
T ss_pred hcCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhh
Confidence 88999999999999999999864 3333477789999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHhC
Q 015777 374 LTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++++..|+...+|+.++++.+++.
T Consensus 286 ~~~~~~g~~~~~p~~~~~~~~~~~ 309 (311)
T COG0524 286 LAVTRPGARPSLPTREEVEAFLEE 309 (311)
T ss_pred hhhccCCCCCCCCCHHHHHHHHhc
Confidence 999999999999999999998875
|
|
| >cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=347.93 Aligned_cols=294 Identities=56% Similarity=0.897 Sum_probs=248.7
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+|+|++++|++...+.. .......+||.+.|+|.++++||.++.+++. +|+|.+|
T Consensus 1 ~ilviG~~~~D~~~~~~~~----~~~~~~~~GG~~~n~a~~l~~lg~~v~~i~~-------------------vG~D~~g 57 (295)
T cd01167 1 KVVCFGEALIDFIPEGSGA----PETFTKAPGGAPANVAVALARLGGKAAFIGK-------------------VGDDEFG 57 (295)
T ss_pred CEEEEcceeEEEecCCCCC----CccccccCCCcHHHHHHHHHhcCCCeEEEEe-------------------ecCcHHH
Confidence 5899999999999876543 4566789999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchh
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~ 221 (400)
+++++.|+++||+++++.+.++.+|+++++.++++|+|++.+++..........+ +..+.+++++++|++++....+..
T Consensus 58 ~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~ 136 (295)
T cd01167 58 DFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTE-LNPDLLSEADILHFGSIALASEPS 136 (295)
T ss_pred HHHHHHHHHcCCCchheeecCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCcc-CChhHhccCCEEEEechhhccchH
Confidence 9999999999999999987788899999999988899999887543332222221 445678899999998875555555
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+...++++.+++.|+++++|++.+...|.......+.++++++++|++++|++|++.+++.... ++.++.+.+.|++
T Consensus 137 ~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~--~~~~~~l~~~g~~ 214 (295)
T cd01167 137 RSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEEDP--EEIAALLLLFGLK 214 (295)
T ss_pred HHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCCH--HHHHHHHhhcCCC
Confidence 66788899999999999999999877677655556677888999999999999999999987543 4566778889999
Q ss_pred EEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCC
Q 015777 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381 (400)
Q Consensus 302 ~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~ 381 (400)
.++||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+...-++.++++|+++|+++|+++|++.|+
T Consensus 215 ~vvvt~G~~G~~~~~~~~~~~~~a~~~~vvDttGAGD~f~a~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~G~ 294 (295)
T cd01167 215 LVLVTRGADGALLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCTKAGA 294 (295)
T ss_pred EEEEecCCcceEEEECCcceeeCCCCcceeeCCCccHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHhhHHHhcccCC
Confidence 99999999999999998889999999999999999999999999999999800000112999999999999999999985
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. |
| >cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-45 Score=352.54 Aligned_cols=288 Identities=28% Similarity=0.375 Sum_probs=247.3
Q ss_pred CcEEEEccceeecccCcCCCCccC----------C-----------CCceecCCChHHHHHHHHHHcCCCceeeeccccc
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAE----------S-----------PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~----------~-----------~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~ 119 (400)
.+|+++|++++|++..+++.|.+. . ......+||++.|+|++|+|||.++.++|.
T Consensus 2 ~~v~~vG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~---- 77 (312)
T cd01168 2 YDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIRGAAALGGSAAFIGR---- 77 (312)
T ss_pred ceEEEECCCeEEEEEecCHHHHHHcCCCCCceeecCHHHHHHHHHhcCccccCCCHHHHHHHHHHHhcCCeEEEEE----
Confidence 369999999999999998877331 1 135788999999999999999999999999
Q ss_pred ccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc
Q 015777 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD 199 (400)
Q Consensus 120 ~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~ 199 (400)
+|+|.+|+++++.|+++||+++++... +.+|+.++++++++|+|+++.+ .++...++.+++.
T Consensus 78 ---------------vG~D~~g~~i~~~l~~~GV~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~ 139 (312)
T cd01168 78 ---------------VGDDKLGDFLLKDLRAAGVDTRYQVQP-DGPTGTCAVLVTPDAERTMCTY--LGAANELSPDDLD 139 (312)
T ss_pred ---------------eccChhHHHHHHHHHHCCCccccccCC-CCCceEEEEEEcCCCceeeecc--cchhhcCChhHCC
Confidence 999999999999999999999988764 5689999999999999988765 4566678888887
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 200 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 200 ~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
.+.+++++++|++++..... .+.+..+++.++++|+++++|++... .....++.+.++++++|++++|++|++.
T Consensus 140 ~~~l~~~~~v~~~~~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~----~~~~~~~~~~~~l~~~d~l~~n~~E~~~ 213 (312)
T cd01168 140 WSLLAKAKYLYLEGYLLTVP--PEAILLAAEHAKENGVKIALNLSAPF----IVQRFKEALLELLPYVDILFGNEEEAEA 213 (312)
T ss_pred HHHHccCCEEEEEEEecCCC--HHHHHHHHHHHHHcCCEEEEeCCcHH----HHHHHHHHHHHHHhhCCEEEeCHHHHHH
Confidence 77899999999988643222 36788899999999999999996311 1223445577888999999999999999
Q ss_pred ccCCCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccc-ccccCCCCchHHHHHHHHHHHHcCCccccch
Q 015777 280 LTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKE 358 (400)
Q Consensus 280 l~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~ 358 (400)
|++.+..+..+.++.+++.+++.||||+|++|++++.+++.+++|+++ +++||||||||+|+|||++++++|++
T Consensus 214 l~~~~~~~~~~~a~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~l~~l~~g~~----- 288 (312)
T cd01168 214 LAEAETTDDLEAALKLLALRCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEP----- 288 (312)
T ss_pred HhCCCCCChHHHHHHHHhcCCCEEEEecCCCCeEEEECCEEEeCCCCCCCCcccCCchHHHHHHHHHHHHHcCCC-----
Confidence 998633334567788889999999999999999999988889999998 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 359 DQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 359 ~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
+++|+++|+++|+++|++.|+++
T Consensus 289 --~~~a~~~a~~~Aa~~v~~~G~~~ 311 (312)
T cd01168 289 --LEECIRLGSYAAAEVIQQLGPRL 311 (312)
T ss_pred --HHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999764
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. |
| >PRK15074 inosine/guanosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=358.85 Aligned_cols=332 Identities=19% Similarity=0.210 Sum_probs=262.1
Q ss_pred CCCCCccc---CCCCCccccccccCCCCCCCCCccCCCCCcEEEEccceeecccCcCCCCcc------------C-----
Q 015777 25 STHPTIKA---SSPLPRLNVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLA------------E----- 84 (400)
Q Consensus 25 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~~~vD~~~~~~~~~~~------------~----- 84 (400)
++++..|+ .+.+.|.++-.+-.| .+..++.+|+++|+.++|+...++...+. +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~ 74 (434)
T PRK15074 2 KFPGQRKSKHYFPVNARDPLLQQIQP-------ENETSRTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAE 74 (434)
T ss_pred CCCcccccccccccCCCCcccccccc-------ccCCCCCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHH
Confidence 45565554 556778888777777 33356678999999999999887632210 0
Q ss_pred -------CCC--ceecCCChHHHHHHHHHHcC-CCceeeecccccccccceeeeccCCCcCCCC-hHHHHHHHHHH--HC
Q 015777 85 -------SPA--FKKAPGGAPANVAVGIARLG-GSSAFIGKTTLFCFYEHVKVIILPCPKVGAD-EFGYMLADILK--EN 151 (400)
Q Consensus 85 -------~~~--~~~~~GG~~~N~A~~larLG-~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D-~~g~~i~~~L~--~~ 151 (400)
... ....+||++.|+|+++++|| .++.++|. ||+| .+|+++++.|+ +.
T Consensus 75 ~l~~~l~~~~~~~~~~~GGsaaNtA~~lArLGG~~~~fig~-------------------VGdDd~~G~~~~~~L~~~~~ 135 (434)
T PRK15074 75 ALYQELKQNNLITHEFAGGTIGNTLHNYSVLADDRSVLLGV-------------------MSSNIEIGSYAYRYLCNTSS 135 (434)
T ss_pred HHHHHHhhccccccccCCCHHHHHHHHHHHcCCCCeEEEEE-------------------eCCCHHHHHHHHHHhhhhhC
Confidence 011 35569999999999999996 99999999 9999 79999999997 68
Q ss_pred CCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc---CchhHHHHHHH
Q 015777 152 NVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI---TEPCKSAHIAA 228 (400)
Q Consensus 152 gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~---~~~~~~~~~~~ 228 (400)
||+++++...+ .+|+.+++.++++|+|++..+ .+++..+++++++.+.+++++++|++++.+. .+...+.+.++
T Consensus 136 GVdt~~v~~~~-~~TG~~~VlV~~dGeRt~~t~--~GA~~~Lt~edld~~~i~~a~ilyl~Gy~l~~~~~~~~~~a~~~a 212 (434)
T PRK15074 136 RTDLNYLQGVD-GPIGRCFTLISEDGERTFAIS--PGHMNQLRPESIPEDVIAGASALVLTAYLVRCKPGEPMPEATMKA 212 (434)
T ss_pred CccCcceEEcC-CCCEEEEEEECCCCCEEEEEe--cChhhcCChhHCCHhHhccCCEEEEeeeehhcccCCCcHHHHHHH
Confidence 99999987654 489999999999999999988 4677788888888888999999999998654 22446788899
Q ss_pred HHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCcEEEEEec
Q 015777 229 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEG 308 (400)
Q Consensus 229 ~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvT~G 308 (400)
++.|++.|+++++|++.+..++...+.+.+ .+++++|++++|++|++.|++..+ .+++++.+.+ +++.|+||+|
T Consensus 213 l~~Ake~G~~VslD~s~~~~v~~~~~~~~e---~l~~~vDILf~NeeEa~~LtG~~d--~eea~~~L~~-~~~~VVVTlG 286 (434)
T PRK15074 213 IEYAKKHNVPVVLTLGTKFVIEDNPQWWQE---FLKEHVSILAMNEDEAEALTGESD--PLLASDKALD-WVDLVLCTAG 286 (434)
T ss_pred HHHHHHcCCEEEEECcchhhccccHHHHHH---HHHhcCCEEEcCHHHHHHHhCCCC--HHHHHHHHHc-CCCEEEEEEC
Confidence 999999999999999976544433333322 345699999999999999998643 4456666654 5899999999
Q ss_pred CCcEEEEeCCc-------e--------------------------------EEEccc---cccccCCCCchHHHHHHHHH
Q 015777 309 PDGCRYYTKDF-------S--------------------------------GRVQGL---KVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 309 ~~G~~~~~~~~-------~--------------------------------~~vpa~---~v~vvDttGAGDaF~Agfl~ 346 (400)
++|++++..++ . .++|++ ++++||||||||+|+|||+|
T Consensus 287 ~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~ 366 (434)
T PRK15074 287 PIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGALSALLH 366 (434)
T ss_pred CCCEEEEecccccccCceeeeccccccccccchhcccchhccccccccccccccCcccCCCCcceeCCCcHHHHHHHHHH
Confidence 99999975221 1 288888 78999999999999999999
Q ss_pred HHHcCC-c------------cccchHHHHHHHHHHHHHHHHHhcccCC--CCCCCCHHHH
Q 015777 347 QLSTDF-S------------LLQKEDQLRDALRFANACGALTVMERGA--IPALPTREAV 391 (400)
Q Consensus 347 ~l~~g~-~------------~~~~~~~l~~al~~A~a~Aa~~v~~~G~--~~~~p~~~~l 391 (400)
+|.+|+ + +.....++++|+++|+++|+..+++.|+ ..++|++++-
T Consensus 367 ~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G~~~~~~~p~~~~~ 426 (434)
T PRK15074 367 DITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHSPRLSRGLPEREDS 426 (434)
T ss_pred HHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccch
Confidence 999997 0 0001113999999999999999999998 5577877663
|
|
| >cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-44 Score=342.38 Aligned_cols=291 Identities=39% Similarity=0.582 Sum_probs=247.5
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+|||++++|++...++.. .........+||++.|+|++|++||.++.++|. +|+|.+|
T Consensus 1 ~i~~iG~~~iD~~~~~~~~~-~~~~~~~~~~GG~~~N~a~~la~lg~~~~~i~~-------------------vG~D~~g 60 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGGRL-EQADSFRKFFGGAEANVAVGLARLGHRVALVTA-------------------VGDDPFG 60 (294)
T ss_pred CeEEechhheeeecCCCCcc-chhhccccccCChHHHHHHHHHhcCCceEEEEe-------------------cCCCHHH
Confidence 58999999999998765433 345667889999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-Cch
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI-TEP 220 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~-~~~ 220 (400)
+++++.|++.||+++++.+.++.+|+.+++.++++|+|++.+++...+...++.++++.+.+++++++|++++... .+.
T Consensus 61 ~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 140 (294)
T cd01166 61 RFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEAALAGADHLHLSGITLALSES 140 (294)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCCHHHHhCCCEEEEcCcchhhCHH
Confidence 9999999999999999988888899999999988899998888655555667777776677899999999886542 222
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC-cHHHHHHHHHhCC
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDDAVVYKLFHAN 299 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-~~~~~~~~l~~~g 299 (400)
..+.+.++++.+++.++++++||+.+..+|. .+...+.+.++++++|++++|++|++.+++.... +..+.++.+ ++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~-~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~l-~~g 218 (294)
T cd01166 141 AREALLEALEAAKARGVTVSFDLNYRPKLWS-AEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTDAAERALAL-ALG 218 (294)
T ss_pred HHHHHHHHHHHHHHcCCEEEECCCCcchhcC-hHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCchhHHHHHHhh-cCC
Confidence 2467788999999999999999987655443 3344566778899999999999999999987542 122333444 589
Q ss_pred CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
++.++||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+.+|++.
T Consensus 219 ~~~viit~G~~G~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~~~ 291 (294)
T cd01166 219 VKAVVVKLGAEGALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------LEEALRFANAAAALVVTRP 291 (294)
T ss_pred ccEEEEEEcCCceEEEECCceEEeCCCCcccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcC
Confidence 999999999999999998888999999999999999999999999999999999 9999999999999999999
Q ss_pred CC
Q 015777 380 GA 381 (400)
Q Consensus 380 G~ 381 (400)
|+
T Consensus 292 G~ 293 (294)
T cd01166 292 GD 293 (294)
T ss_pred CC
Confidence 85
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. |
| >cd01944 YegV_kinase_like YegV-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-44 Score=341.50 Aligned_cols=283 Identities=24% Similarity=0.341 Sum_probs=236.8
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++|++++|++..+++.|.. +...+...+|| +.|+|++|++||.++.++|. +|+
T Consensus 1 ~i~~iG~~~~D~i~~~~~~~~~~~~~~~~~~~~~~GG-~~Nva~~l~~lG~~~~~~~~-------------------vG~ 60 (289)
T cd01944 1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGG-GFNVMVAASRLGIPTVNAGP-------------------LGN 60 (289)
T ss_pred CeEEEcceeEEEEeecccCCCCCCccccceeeeccCc-HHHHHHHHHHcCCCeEEEEE-------------------ecC
Confidence 4899999999999998876544 34567899999 99999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++... +..|+.++++++.+|+|+++++++ .+..++++.++...+.+++++|++++.+.
T Consensus 61 D~~g~~i~~~l~~~gi~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (289)
T cd01944 61 GNWADQIRQAMRDEGIEILLPPRG-GDDGGCLVALVEPDGERSFISISG--AEQDWSTEWFATLTVAPYDYVYLSGYTLA 137 (289)
T ss_pred ChHHHHHHHHHHHcCCcccccccc-CCCCeEEEEEEcCCCceEEEEeCC--ccCCCCHHHhccccCCCCCEEEEeCcccc
Confidence 999999999999999999998775 568888888888899999887743 44455656555445778999999987653
Q ss_pred Cch-hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 218 TEP-CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 218 ~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
... ..+.+.++++.++ .++++++|++++...|. .+.+.++++++|++++|++|++.|++....+....++.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~-~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~~~~~~~~~~~~~~ 211 (289)
T cd01944 138 SENASKVILLEWLEALP-AGTTLVFDPGPRISDIP-----DTILQALMAKRPIWSCNREEAAIFAERGDPAAEASALRIY 211 (289)
T ss_pred CcchhHHHHHHHHHhcc-CCCEEEEcCcccccccC-----HHHHHHHHhcCCEEccCHHHHHHHhCCCCcchHHHHHHHH
Confidence 322 3556666666644 57999999998766543 2456678889999999999999999976554444466778
Q ss_pred hCCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
+.+.+.|+||+|++|++++. +++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+++
T Consensus 212 ~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~~~~g~~-------~~~a~~~a~a~aa~~ 284 (289)
T cd01944 212 AKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMS-------LADAVLLANAAAAIV 284 (289)
T ss_pred hccCCeEEEEECCCcEEEEecCCCeEEecCCCCCCccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhh
Confidence 88999999999999999998 4566788999999999999999999999999999999 999999999999999
Q ss_pred hcccC
Q 015777 376 VMERG 380 (400)
Q Consensus 376 v~~~G 380 (400)
+++.|
T Consensus 285 ~~~~G 289 (289)
T cd01944 285 VTRSG 289 (289)
T ss_pred hccCC
Confidence 99876
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=341.16 Aligned_cols=283 Identities=34% Similarity=0.461 Sum_probs=244.2
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+|+|++++|++...++.|.. ....+...+||++.|+|++|++||.++.++|. +|+
T Consensus 1 ~il~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~-------------------vG~ 61 (292)
T cd01174 1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGA-------------------VGD 61 (292)
T ss_pred CEEEEeeceeEEEEEecCCCCCCCcEEeccceecCCCcHHHHHHHHHHcCCceEEEEE-------------------EcC
Confidence 4899999999999988876654 34556789999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEEcccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSIS 215 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~~~~~ 215 (400)
|.+|+++++.|+++||++++++..++.+|+.+++.++.+|+|++++++ ++...++++.++. +.++.++++++.+.
T Consensus 62 D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 138 (292)
T cd01174 62 DAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVP--GANGELTPADVDAALELIAAADVLLLQLE- 138 (292)
T ss_pred CccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcCCCceEEEEeC--CCCCCCCHHHHHHHHHhcccCCEEEEeCC-
Confidence 999999999999999999999888888999999999989999988873 4444555555543 56889999998642
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVV 292 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~ 292 (400)
.+.+.+..+++.++++|+++++|++.... ...++++++|++++|++|++.|++....+. .+.+
T Consensus 139 ----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 204 (292)
T cd01174 139 ----IPLETVLAALRAARRAGVTVILNPAPARP----------LPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAA 204 (292)
T ss_pred ----CCHHHHHHHHHHHHhcCCEEEEeCCCcCc----------CcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHH
Confidence 23467778899999999999999975432 124578899999999999999998765543 3456
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
+.+.+.|++.|++|+|++|++++++++.+++|+++++++|||||||+|.|||++++++|++ +++|+++|+++|
T Consensus 205 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGD~F~ag~l~~l~~g~~-------~~~al~~a~~~A 277 (292)
T cd01174 205 RLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAFKVKAVDTTGAGDTFIGALAAALARGLS-------LEEAIRFANAAA 277 (292)
T ss_pred HHHHHcCCCEEEEEeCCCceEEEeCCceEEecCCCcccCCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 7888899999999999999999998888899999999999999999999999999999999 999999999999
Q ss_pred HHHhcccCCCCCCCC
Q 015777 373 ALTVMERGAIPALPT 387 (400)
Q Consensus 373 a~~v~~~G~~~~~p~ 387 (400)
+.++++.|+.+++|+
T Consensus 278 a~~~~~~G~~~~~~~ 292 (292)
T cd01174 278 ALSVTRPGAQPSIPT 292 (292)
T ss_pred HHHhcCcCCCCCCCC
Confidence 999999999988875
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. |
| >PRK09850 pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=340.59 Aligned_cols=299 Identities=22% Similarity=0.244 Sum_probs=243.8
Q ss_pred CCCCCcEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
|++++.|+|+|++++|++...+..+.. ........+||++.|+|++++|||.++.++|.
T Consensus 1 ~~~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~ig~------------------ 62 (313)
T PRK09850 1 MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSA------------------ 62 (313)
T ss_pred CCCCCcEEEECcEEEeeeccCCCcCcCCCCCceEEEEeCCcHHHHHHHHHHHcCCCeEEEEE------------------
Confidence 456678999999999999875443221 23456788999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHY 211 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~ 211 (400)
||+|.+|+++++.|++.||+++++...++.+|+.++++++++|++.+.+++ ++....+..+.+. .+.+++++++++
T Consensus 63 -vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 140 (313)
T PRK09850 63 -VGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAIND-MNISNAITAEYLAQHREFIQRAKVIVA 140 (313)
T ss_pred -ecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecCCCCEEEEecC-chHhhhCCHHHHHHHHHHHhcCCEEEE
Confidence 999999999999999999999998888888899999999999999887652 3444445544433 245788999988
Q ss_pred ccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---H
Q 015777 212 GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---D 288 (400)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~ 288 (400)
++. .+.+....+++.+ .++++++|++.. |. ...+.++++++|++++|++|++.|++....+ .
T Consensus 141 ~~~-----~~~~~~~~~~~~~--~g~~v~~D~~~~---~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~ 205 (313)
T PRK09850 141 DCN-----ISEEALAWILDNA--ANVPVFVDPVSA---WK-----CVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDV 205 (313)
T ss_pred eCC-----CCHHHHHHHHHhc--cCCCEEEEcCCH---HH-----HHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHH
Confidence 642 2244555555543 589999999731 21 1335667889999999999999999864322 2
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCC-ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~-~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~ 367 (400)
+++++++.+.|++.+|||+|++|++++.++ +..++|++++++||||||||+|+|||++++++|++ +++|+++
T Consensus 206 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfi~~l~~g~~-------~~eal~~ 278 (313)
T PRK09850 206 AKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMP-------FAESVRF 278 (313)
T ss_pred HHHHHHHHHcCCCEEEEEeCCceEEEEcCCCCeEecCCCCcccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHH
Confidence 355677778899999999999999998854 55678888999999999999999999999999999 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 368 ANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 368 A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
|+++|+++++..+.....|++++|++++++
T Consensus 279 a~a~aa~~~~~~~~~~~~~~~~~~~~~~~~ 308 (313)
T PRK09850 279 AQGCSSMALSCEYTNNPDLSIANVISLVEN 308 (313)
T ss_pred HHHHHHHHhcCCCCCCcccCHHHHHHHHHH
Confidence 999999999999999999999999998763
|
|
| >cd01945 ribokinase_group_B Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=333.77 Aligned_cols=279 Identities=27% Similarity=0.362 Sum_probs=237.2
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++|++++|++..++..|.. +...+...+||++.|+|.+|++||.++.++|. +|+
T Consensus 1 ~i~~iG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~-------------------vG~ 61 (284)
T cd01945 1 RVLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGV-------------------VGD 61 (284)
T ss_pred CEEEECcceeEEEEEeccCCCCCCeEEEeEEEEecCCHHHHHHHHHHHcCCCeEEEEE-------------------ecC
Confidence 5899999999999998776654 34567889999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++...++.+|+.+++ .+.+|++++..+.. ....+..++++...+++++++|+++..
T Consensus 62 D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~i~~~~-- 136 (284)
T cd01945 62 DAIGRLILAELAAEGVDTSFIVVAPGARSPISSI-TDITGDRATISITA--IDTQAAPDSLPDAILGGADAVLVDGRQ-- 136 (284)
T ss_pred chHHHHHHHHHHHcCCCccceeecCCCCCccEEE-EccCCCceEEEecC--CCCCCCcccCCHHHhCcCCEEEEcCCC--
Confidence 9999999999999999999999888888988877 45577777666532 333456666766678999999998753
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
++...++++.++++|+++.+|.++... .+ +.++++++|++++|++|++.+++.... +..+.+.+
T Consensus 137 ----~~~~~~~~~~~~~~g~~v~~~~~~~~~--------~~-~~~~~~~~dil~~n~~e~~~l~~~~~~---~~~~~l~~ 200 (284)
T cd01945 137 ----PEAALHLAQEARARGIPIPLDLDGGGL--------RV-LEELLPLADHAICSENFLRPNTGSADD---EALELLAS 200 (284)
T ss_pred ----HHHHHHHHHHHHHcCCCeeEeccCCcc--------cc-hHHHhccCCEEEeChhHHhhhcCCCHH---HHHHHHHh
Confidence 346678899999999977777653211 12 566888999999999999999887432 56677788
Q ss_pred CCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 015777 298 ANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
.+++.|+||+|++|++++. +++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++
T Consensus 201 ~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~ 273 (284)
T cd01945 201 LGIPFVAVTLGEAGCLWLERDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMP-------LREALRFASAAAALKC 273 (284)
T ss_pred cCCcEEEEEECCCCeEEEcCCCCEEecCCCccccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 9999999999999999998 6678899999999999999999999999999999999 9999999999999999
Q ss_pred cccCCCCCCCC
Q 015777 377 MERGAIPALPT 387 (400)
Q Consensus 377 ~~~G~~~~~p~ 387 (400)
++.|+..++|+
T Consensus 274 ~~~G~~~~~~~ 284 (284)
T cd01945 274 RGLGGRAGLPT 284 (284)
T ss_pred hccCCcccCCC
Confidence 99999888875
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . |
| >PTZ00247 adenosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=341.48 Aligned_cols=289 Identities=21% Similarity=0.258 Sum_probs=237.0
Q ss_pred CCCcEEEEccceeecccCcCC------CCcc------------------CCCCceecCCChHHHHHHHHHHcC---C-Cc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG------LSLA------------------ESPAFKKAPGGAPANVAVGIARLG---G-SS 110 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~------~~~~------------------~~~~~~~~~GG~~~N~A~~larLG---~-~~ 110 (400)
..++|+|||++++|++..+++ .|.. ........+||++.|+|+++++|| . ++
T Consensus 4 ~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~~g~~~v 83 (345)
T PTZ00247 4 APKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQAPKGFV 83 (345)
T ss_pred CCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhcCCCCcE
Confidence 446899999999999998874 1221 112357889999999999999885 5 89
Q ss_pred eeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCcc
Q 015777 111 AFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 190 (400)
Q Consensus 111 ~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~ 190 (400)
.++|. ||+|.+|+++++.|+++||+++++. .++.+|+++++.+++ |+|+++.+ .+++
T Consensus 84 ~~ig~-------------------vG~D~~G~~i~~~l~~~GVd~~~~~-~~~~~Tg~~~i~v~~-~~r~~~~~--~ga~ 140 (345)
T PTZ00247 84 CYVGC-------------------VGDDRFAEILKEAAEKDGVEMLFEY-TTKAPTGTCAVLVCG-KERSLVAN--LGAA 140 (345)
T ss_pred EEEEE-------------------eccchhHHHHHHHHHHcCCeeeccc-cCCCCcEEEEEEEcC-CCcccccC--cchh
Confidence 99999 9999999999999999999998876 567799999998874 79988775 4566
Q ss_pred ccCCccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc
Q 015777 191 MLLQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET 266 (400)
Q Consensus 191 ~~l~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~ 266 (400)
..+++++++. +.+++++++|++++.+. .+.+...++++.++++|+++++|++... + ....++.+.+++++
T Consensus 141 ~~l~~~~i~~~~~~~~l~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~~--~--~~~~~~~~~~~l~~ 214 (345)
T PTZ00247 141 NHLSAEHMQSHAVQEAIKTAQLYYLEGFFLT--VSPNNVLQVAKHARESGKLFCLNLSAPF--I--SQFFFERLLQVLPY 214 (345)
T ss_pred hcCChHHcCcHHHHHHHhhCCEEEEEEEEec--ccHHHHHHHHHHHHHcCCEEEEECCcHH--H--HHHHHHHHHHHHhh
Confidence 6777777764 36889999999986432 2357788899999999999999986311 1 12234557788999
Q ss_pred CcEEEcCHhHHhcccCCC---CCcHHHHHHHHHh------CCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCCC
Q 015777 267 ADIIKISEEEISFLTQGE---DPYDDAVVYKLFH------ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDAT 334 (400)
Q Consensus 267 ~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~------~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDtt 334 (400)
+|++++|++|++.|+|.. ..+.++.++.+.+ .+.+.||||+|++|++++++++.+++|++++ ++||||
T Consensus 215 ~Dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTt 294 (345)
T PTZ00247 215 VDILFGNEEEAKTFAKAMKWDTEDLKEIAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTN 294 (345)
T ss_pred CCEEEeCHHHHHHHhhccCCCccCHHHHHHHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCC
Confidence 999999999999999831 1234455555543 2578999999999999999998888999887 599999
Q ss_pred CchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 335 GAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 335 GAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+..
T Consensus 295 GAGDaF~agfl~~l~~g~~-------~~~al~~a~~aAa~~v~~~Ga~~ 336 (345)
T PTZ00247 295 GAGDAFVGGFLAQYANGKD-------IDRCVEAGHYSAQVIIQHNGCTY 336 (345)
T ss_pred ChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999 99999999999999999999863
|
|
| >PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=337.32 Aligned_cols=290 Identities=39% Similarity=0.543 Sum_probs=245.7
Q ss_pred CcEEEEccceeecccCcCCC---CccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 61 PLVVCFGEMLIDFVPTVSGL---SLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~---~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.+|+|+|++++|++...+.. .. +.......+||++.|+|++|++||.++.+++. +|+
T Consensus 2 ~~v~~iG~~~iD~~~~~~~~~~~~~-~~~~~~~~~GG~~~n~a~~l~~LG~~v~~i~~-------------------vG~ 61 (301)
T PF00294_consen 2 KKVLVIGEVNIDIIGYVDRFKGDLV-RVSSVKRSPGGAGANVAIALARLGADVALIGK-------------------VGD 61 (301)
T ss_dssp EEEEEESEEEEEEEEESSSHTTSEE-EESEEEEEEESHHHHHHHHHHHTTSEEEEEEE-------------------EES
T ss_pred CcEEEECccceEEEeecCCcCCcce-ecceEEEecCcHHHHHHHHHHhccCcceEEee-------------------ccC
Confidence 57999999999999988763 22 56678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+.+++.|+++||+++++.+.++.+|+++++.++++|+|++..+. +....++.+++.++.+.+++++|+++..+.
T Consensus 62 D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (301)
T PF00294_consen 62 DFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDPDGERTFVFSP--GANSDLTPDELDEEAIDEADILHLSGVSLP 139 (301)
T ss_dssp SHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEETTSEEEEEEEE--GGGGGGGHHHHHHHHHHTESEEEEESGHCS
T ss_pred cchhhhhhhccccccccccccccccccccceeEeeecccccceeeecc--ccccccccccccccccccccceeecccccc
Confidence 999999999999999999999988888999999999999999998873 444456665556678889999999983333
Q ss_pred CchhHHHHHHHHHHHhhCC--CeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHH---
Q 015777 218 TEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV--- 292 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~--- 292 (400)
...+......+.+.+++.+ .+++.++. | ..+++.+.++++++|++++|++|+..+++....+.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 211 (301)
T PF00294_consen 140 EGIPEDLLEALAKAAKKNGPFDPVFRDPS-----W---DDLREDLKELLPYADILKPNEEEAEALTGSKIDDPEDALAAL 211 (301)
T ss_dssp TTSHHHHHHHHHHHHHHTTEEEEEEEGGG-----S---HHHHHHHHHHHHTSSEEEEEHHHHHHHHTCSTSSHHHHHHHH
T ss_pred cccccceeeeccccccccccccccccccc-----c---cccchhhhhhccccchhccccccccccccccccchhhhhccc
Confidence 4444566677777777777 34555542 2 115678888889999999999999999999865555544
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEcc-ccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQG-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa-~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.++..+++.+++|+|++|++++++++.+++++ ++++++|+|||||+|+|||++++++|++ +++|+++|+++
T Consensus 212 ~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~A~~i~~l~~~~~-------~~~a~~~a~~~ 284 (301)
T PF00294_consen 212 RELQARGVKIVIVTLGEDGALYYTNDESYHVPPVPPVNVVDTTGAGDAFAAGFIYGLLSGMS-------LEEALKFANAA 284 (301)
T ss_dssp HHHHHTTSSEEEEEEGGGEEEEEETTEEEEEEEESSSSSSSCTTHHHHHHHHHHHHHHTTHH-------HHHHHHHHHHH
T ss_pred cccchhhhhhhhccccccCcccccccccccccccccccccceeccchhhhHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 455568999999999999999999999999998 5689999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCC
Q 015777 372 GALTVMERGAIPALPT 387 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~ 387 (400)
|++++++.|+..++||
T Consensus 285 aa~~v~~~g~~~~~p~ 300 (301)
T PF00294_consen 285 AALKVQQPGPRSPLPT 300 (301)
T ss_dssp HHHHHTSSSSSGGTT-
T ss_pred HHHHhCCCCCcCCCCC
Confidence 9999999999988887
|
The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B .... |
| >PLN02379 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=336.16 Aligned_cols=299 Identities=25% Similarity=0.297 Sum_probs=239.6
Q ss_pred CCcEEEEc-cceeecccCcCCCCcc------------------------C---------CCCceecCCChHHHHHHHHHH
Q 015777 60 SPLVVCFG-EMLIDFVPTVSGLSLA------------------------E---------SPAFKKAPGGAPANVAVGIAR 105 (400)
Q Consensus 60 ~~~v~viG-~~~vD~~~~~~~~~~~------------------------~---------~~~~~~~~GG~~~N~A~~lar 105 (400)
+++|++|| +.++|+...++...+. . .......+||++.|+++++++
T Consensus 19 ~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~ 98 (367)
T PLN02379 19 PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGLSA 98 (367)
T ss_pred CCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHHHH
Confidence 35899999 9999999887522110 0 113667899999999999996
Q ss_pred -cCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEe
Q 015777 106 -LGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY 184 (400)
Q Consensus 106 -LG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~ 184 (400)
||.++.++|+ ||+|.+|+++++.|++.||++++++.. +.+|+.++++++++|+|++..+
T Consensus 99 ~LG~~~~~ig~-------------------VG~D~~G~~~~~~L~~~GI~~~~~~~~-~~~Tg~~~v~v~~dgert~~~~ 158 (367)
T PLN02379 99 GFGVSTGIIGA-------------------CGDDEQGKLFVSNMGFSGVDLSRLRAK-KGPTAQCVCLVDALGNRTMRPC 158 (367)
T ss_pred hcCCCEEEEEE-------------------eCCChhHHHHHHHHHHcCCCccCcccC-CCCCceEEEEECCCCCccccCC
Confidence 9999999999 999999999999999999999888654 4589999999999999987654
Q ss_pred cCCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh
Q 015777 185 RNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW 264 (400)
Q Consensus 185 ~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll 264 (400)
.+....++.+++..+.+++++|+|++ +.. .+.+.+.++++.++++|+++++|++.... ...+++.+.+++
T Consensus 159 --lg~~~~l~~~~~~~~~~~~~~~v~v~-~~~---~~~~~~~~~~~~A~~~g~~v~lD~s~~~~----v~~~r~~l~~ll 228 (367)
T PLN02379 159 --LSSAVKLQADELTKEDFKGSKWLVLR-YGF---YNLEVIEAAIRLAKQEGLSVSLDLASFEM----VRNFRSPLLQLL 228 (367)
T ss_pred --ccccccCChhHCCHHHHhcCCEEEEE-ccc---CCHHHHHHHHHHHHHcCCEEEEeccchhh----hhhhhHHHHHHh
Confidence 34555677777777888999999998 433 23567889999999999999999964211 123345566666
Q ss_pred c--cCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccc-ccccCCCCchHHHH
Q 015777 265 E--TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFV 341 (400)
Q Consensus 265 ~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~-v~vvDttGAGDaF~ 341 (400)
+ ++|++++|++|++.+++....+..+.+.+++..+++.++||+|++|++++.+++.+++|+++ +++||||||||+|+
T Consensus 229 ~~~~vDilf~Ne~Ea~~l~~~~~~~~~~~~~~~l~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~~~vVDTtGAGDaFa 308 (367)
T PLN02379 229 ESGKIDLCFANEDEARELLRGEQESDPEAALEFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNAVDATGAGDLFA 308 (367)
T ss_pred hcCCccEEEcCHHHHHHHhcCCCCCCHHHHHHHHHhcCCEEEEEECCCCeEEEECCEEEEecCCCCCCcccCCChhHHHH
Confidence 4 89999999999999987532222233345566789999999999999999998889999987 47999999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 015777 342 AGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 342 Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
|||++++++|++ +++|+++|+++|+.+|++.|++......+++.+.+
T Consensus 309 agfl~gl~~G~~-------l~~a~~~g~~aAa~vi~~~G~~~~~~~~~~~~~~~ 355 (367)
T PLN02379 309 SGFLYGLIKGLS-------LEECCKVGACSGGSVVRALGGEVTPENWQWMYKQM 355 (367)
T ss_pred HHHHHHHHCCCC-------HHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Confidence 999999999999 99999999999999999999874333333344443
|
|
| >cd01942 ribokinase_group_A Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=326.90 Aligned_cols=270 Identities=29% Similarity=0.422 Sum_probs=229.3
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+|+|++++|++..+++.|.. ........+||.+.|+|++++|||.++.++|. +|+
T Consensus 1 ~v~~iG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~-------------------vG~ 61 (279)
T cd01942 1 DVAVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAA-------------------VGE 61 (279)
T ss_pred CEEEEecceeeeEeecccCCCCCceEecceeeecCCcHHHHHHHHHHHcCCCceEEEE-------------------ecC
Confidence 5899999999999988887754 35678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++...++.+|+.+++.++.+|+|++..++ +....+..++ ....+++++++|+++..
T Consensus 62 D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~-- 136 (279)
T cd01942 62 DFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYP--GAMDELEPND-EADPDGLADIVHLSSGP-- 136 (279)
T ss_pred CcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcCCCCEEEEecC--CcccccccCC-chhhhcccCEEEeCCch--
Confidence 999999999999999999999777777899999999888888877653 4444455544 44678899999998763
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHH---hcccCCCCCcHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEI---SFLTQGEDPYDDAVVYK 294 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~---~~l~~~~~~~~~~~~~~ 294 (400)
.+.++++.+++.|+++++|++++...|. .+.+.++++++|++++|++|+ ..+++.... .
T Consensus 137 ------~~~~~~~~~~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~---~---- 198 (279)
T cd01942 137 ------GLIELARELAAGGITVSFDPGQELPRLS-----GEELEEILERADILFVNDYEAELLKERTGLSEA---E---- 198 (279)
T ss_pred ------HHHHHHHHHHHcCCeEEEcchhhhhhcc-----HHHHHHHHhhCCEEecCHHHHHHHHhhcCCChH---H----
Confidence 3566777888889999999987654442 244667888999999999999 555554321 1
Q ss_pred HHhCCCcEEEEEecCCcEEEEeCCceEEEccc-cccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~-~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
...+++.|++|+|++|++++.+++.+++|++ +++++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 199 -~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------l~~al~~a~~~Aa 270 (279)
T cd01942 199 -LASGVRVVVVTLGPKGAIVFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYD-------LEESLRLGNLAAS 270 (279)
T ss_pred -HhcCCCEEEEEECCCceEEEECCceEEccCcCcCCCcCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 1278999999999999999998888999987 889999999999999999999999999 9999999999999
Q ss_pred HHhcccCC
Q 015777 374 LTVMERGA 381 (400)
Q Consensus 374 ~~v~~~G~ 381 (400)
+++++.|+
T Consensus 271 ~~~~~~G~ 278 (279)
T cd01942 271 LKVERRGA 278 (279)
T ss_pred HHHcccCC
Confidence 99999995
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >TIGR02152 D_ribokin_bact ribokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=321.67 Aligned_cols=284 Identities=33% Similarity=0.428 Sum_probs=242.4
Q ss_pred ccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHH
Q 015777 67 GEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGY 142 (400)
Q Consensus 67 G~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~ 142 (400)
|++++|++..+++.|.. +...+...+||++.|+|++|++||.++.+++. +|+|.+|+
T Consensus 1 G~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~-------------------vG~D~~g~ 61 (293)
T TIGR02152 1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGK-------------------VGDDAFGD 61 (293)
T ss_pred CCceEeEEEEeCCCCCCCCcEecCCceecCCCcHHHHHHHHHHCCCCEEEEEE-------------------ecCCccHH
Confidence 78999999999887654 35567899999999999999999999999999 99999999
Q ss_pred HHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEccccccCch
Q 015777 143 MLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEP 220 (400)
Q Consensus 143 ~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~~~~~~~~~ 220 (400)
++++.|++.||++++++..++.+|++++++++++|+++++++. +.+..+.+++++ .+.+..++++++.+ +.
T Consensus 62 ~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 134 (293)
T TIGR02152 62 ELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVA--GANAELTPEDIDAAEALIAESDIVLLQL-----EI 134 (293)
T ss_pred HHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcCCCCEEEEEEC--CcCCcCCHHHHHHHHhhhccCCEEEEec-----CC
Confidence 9999999999999999888778999999999988999888763 444556666665 35678899988753 23
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC---cHHHHHHHHHh
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP---YDDAVVYKLFH 297 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~---~~~~~~~~l~~ 297 (400)
+.+.+.++++.++++++++++|++.... ....++++++|++++|++|++.+++.... +..+.++.+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~v~~D~~~~~~---------~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 205 (293)
T TIGR02152 135 PLETVLEAAKIAKKHGVKVILNPAPAIK---------DLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLE 205 (293)
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCcCcc---------cchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHHHH
Confidence 3567788899999999999999974321 11245788999999999999999987532 23456677888
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.++||+|++|+.+++++..+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+.+++
T Consensus 206 ~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~vdt~GAGDaf~Ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~ 278 (293)
T TIGR02152 206 KGVKNVIITLGSKGALLVSKDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKS-------LEDAIRFANAAAAISVT 278 (293)
T ss_pred cCCCeEEEEeCCCceEEEeCCceeEccCCCCceeCCCCcHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHc
Confidence 89999999999999999998888899999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCHHHHH
Q 015777 378 ERGAIPALPTREAVL 392 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~ 392 (400)
+.|+...+|++++++
T Consensus 279 ~~G~~~~~~~~~~~~ 293 (293)
T TIGR02152 279 RKGAQSSIPYLEEVE 293 (293)
T ss_pred ccCcccCCCChHHcC
Confidence 999988889888763
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. |
| >PRK09954 putative kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=329.94 Aligned_cols=323 Identities=19% Similarity=0.189 Sum_probs=244.7
Q ss_pred CcccCCCCCccccccccCC-CCCCCCCccCCCCCcEEEEccceeecccCcC-CCCcc--CCCCceecCCChHHHHHHHHH
Q 015777 29 TIKASSPLPRLNVRVKALP-GDGLSETKETRESPLVVCFGEMLIDFVPTVS-GLSLA--ESPAFKKAPGGAPANVAVGIA 104 (400)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~viG~~~vD~~~~~~-~~~~~--~~~~~~~~~GG~~~N~A~~la 104 (400)
.++++.......|+.++.. +.++.. .+...|+|+|++++|++..++ ..|.. ....+...+||++.|+|++++
T Consensus 29 ~s~~~v~~~i~~L~~~g~i~~~~~~l----~~~~~v~viG~~~vD~~~~~~~~~p~~~~~~~~~~~~~GG~~~NvA~~la 104 (362)
T PRK09954 29 ISRSRVAAHIMDLMRKGRIKGKGYIL----TEQEYCVVVGAINMDIRGMADIRYPQAASHPGTIHCSAGGVGRNIAHNLA 104 (362)
T ss_pred CCHHHHHHHHHHHHHCCCcCCcEEEE----cCCccEEEEEEEEEEEEEeeCCcCcCCCCCCceEEEecCcHHHHHHHHHH
Confidence 3333444444555554544 222222 233489999999999998776 44433 345678889999999999999
Q ss_pred HcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEe
Q 015777 105 RLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY 184 (400)
Q Consensus 105 rLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~ 184 (400)
|||.++.++|. ||+|.+|+++++.|++.||+++++...++.+|+.++++.+.++++.+. .
T Consensus 105 rLG~~v~~ig~-------------------VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~~~~~~~~-~ 164 (362)
T PRK09954 105 LLGRDVHLLSA-------------------IGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANRQDETVLA-I 164 (362)
T ss_pred HcCCCeEEEEE-------------------ECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcCCCCEEEE-E
Confidence 99999999999 999999999999999999999999888888899988887766555444 3
Q ss_pred cCCCccccCCccccch--hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh
Q 015777 185 RNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS 262 (400)
Q Consensus 185 ~~~~~~~~l~~~~l~~--~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ 262 (400)
.++.....++++.++. +.+..+++++++.. .+.+....+++.+ +++++++|+... ...+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a--~~~~v~~D~~~~--------~~~~~~~~ 229 (362)
T PRK09954 165 NDTHILQQLTPQLLNGSRDLIRHAGVVLADCN-----LTAEALEWVFTLA--DEIPVFVDTVSE--------FKAGKIKH 229 (362)
T ss_pred cCchhhhcCCHHHHHHHHHHHhcCCEEEEECC-----CCHHHHHHHHHhC--CCCcEEEECCCH--------HHhhhhhh
Confidence 3333444555554442 45678888887642 2234555555554 479999998631 11133567
Q ss_pred hhccCcEEEcCHhHHhcccCCCCCc---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCC-ceEEEccccccccCCCCchH
Q 015777 263 IWETADIIKISEEEISFLTQGEDPY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGD 338 (400)
Q Consensus 263 ll~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~-~~~~vpa~~v~vvDttGAGD 338 (400)
+++++|++++|++|++.++|....+ .+++++.+++.|++.||||+|++|++++..+ +.+++|++++++||||||||
T Consensus 230 ~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGD 309 (362)
T PRK09954 230 WLAHIHTLKPTQPELEILWGQAITSDADRNAAVNALHQQGVQQIFVYLPDESVFCSEKDGEQFLLTAPAHTTVDSFGADD 309 (362)
T ss_pred hhccccEEecCHHHHHHHcCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCccEEEEeCCCceEeccCCCcccccccchHH
Confidence 8899999999999999999875432 2356678888999999999999999988755 46678999999999999999
Q ss_pred HHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 339 AFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 339 aF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+|+|||++++++|++ +++|+++|+++|++++.+..+...-.+.+.+++.++.
T Consensus 310 aF~Ag~l~~l~~g~~-------~~eal~~a~a~Aal~~~s~~~~~~~~~~~~~~~~~~~ 361 (362)
T PRK09954 310 GFMAGLVYSFLEGYS-------FRDSARFAMACAAISRASGSLNNPTLSADNALSLVPM 361 (362)
T ss_pred HHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHhcc
Confidence 999999999999999 9999999999999997755444334688888888753
|
|
| >cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=316.92 Aligned_cols=260 Identities=23% Similarity=0.341 Sum_probs=220.5
Q ss_pred cEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+|+|++++|++..+++.|.+. ...+...+||++.|+|++|+|||.++.++|. +|+
T Consensus 1 ~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~i~~-------------------vG~ 61 (265)
T cd01947 1 KIAVVGHVEWDIFLSLDAPPQPGGISHSSDSRESPGGGGANVAVQLAKLGNDVRFFSN-------------------LGR 61 (265)
T ss_pred CEEEEeeeeEEEEEEecCCCCCCceeecccceeecCchHHHHHHHHHHcCCceEEEEE-------------------ecC
Confidence 58999999999999988766543 5678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++ ++++.+++.. +..|+.++++++++|+|++.+..... .++++.+.+++++++|+++..
T Consensus 62 D~~g~~i~~~l~~-~~~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-- 131 (265)
T cd01947 62 DEIGIQSLEELES-GGDKHTVAWR-DKPTRKTLSFIDPNGERTITVPGERL------EDDLKWPILDEGDGVFITAAA-- 131 (265)
T ss_pred ChHHHHHHHHHHh-cCCcceEEec-CCCCceEEEEECCCCcceEEecCCCC------cccCCHhHhccCCEEEEeccc--
Confidence 9999999999999 9998887764 45899999999999999887753221 234445677899999998753
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
...++++.+++.+ .+++|++.+... +.+.++++++|++++|++|+..+++ .+.+.+
T Consensus 132 ------~~~~~~~~a~~~~-~~~~d~~~~~~~--------~~~~~~~~~~d~~~~n~~e~~~l~~---------~~~~~~ 187 (265)
T cd01947 132 ------VDKEAIRKCRETK-LVILQVTPRVRV--------DELNQALIPLDILIGSRLDPGELVV---------AEKIAG 187 (265)
T ss_pred ------ccHHHHHHHHHhC-CeEeccCccccc--------hhHHHHhhhCCEEEeCHHHHHHhhh---------HHHHHh
Confidence 1235566777765 577898765431 2456788899999999999988764 346677
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.+++.++||+|++|++++++++.+++|+++++++|||||||+|.|||++++++|++ +++|+++|+++|+++++
T Consensus 188 ~~~~~viit~G~~Ga~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~v~ 260 (265)
T cd01947 188 PFPRYLIVTEGELGAILYPGGRYNHVPAKKAKVPDSTGAGDSFAAGFIYGLLKGWS-------IEEALELGAQCGAICVS 260 (265)
T ss_pred ccCCEEEEEeCCCCeEEEECCeeEECCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 89999999999999999998888899999999999999999999999999999999 99999999999999999
Q ss_pred ccCC
Q 015777 378 ERGA 381 (400)
Q Consensus 378 ~~G~ 381 (400)
+.|+
T Consensus 261 ~~G~ 264 (265)
T cd01947 261 HFGP 264 (265)
T ss_pred ccCC
Confidence 9995
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=311.96 Aligned_cols=263 Identities=30% Similarity=0.364 Sum_probs=217.7
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+++|++++|++... ....+||++.|+|.+|++||.++.+++. +|+|.+|
T Consensus 1 ~v~~iG~~~~D~~~~~----------~~~~~GG~~~Nva~~la~lG~~~~~~~~-------------------vG~D~~g 51 (264)
T cd01940 1 RLAAIGDNVVDKYLHL----------GKMYPGGNALNVAVYAKRLGHESAYIGA-------------------VGNDDAG 51 (264)
T ss_pred CeEEEcceEEEEeccC----------ceecCCCcHHHHHHHHHHcCCCeeEEec-------------------ccCchhH
Confidence 5899999999999752 3578999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchh
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~ 221 (400)
+++++.|++.||++++++..++ +|+.+++. .++|+|++.+++. +......+.+...+.+++++++|++++..
T Consensus 52 ~~i~~~l~~~gI~~~~v~~~~~-~t~~~~~~-~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----- 123 (264)
T cd01940 52 AHVRSTLKRLGVDISHCRVKEG-ENAVADVE-LVDGDRIFGLSNK-GGVAREHPFEADLEYLSQFDLVHTGIYSH----- 123 (264)
T ss_pred HHHHHHHHHcCCChhheEEcCC-CCceEEEE-ecCCceEEEeecC-CcHHhcccCcccHhHHhcCCEEEEccccc-----
Confidence 9999999999999999987654 78887755 4678888877642 22222222223335678999999987642
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+...++++.++++|+++++|++.+ |. .+.+.++++++|++++|++|... .+..+.++.+++.+++
T Consensus 124 ~~~~~~~~~~a~~~g~~v~~D~~~~---~~-----~~~~~~~~~~~d~~~~~~~~~~~------~~~~~~~~~l~~~~~~ 189 (264)
T cd01940 124 EGHLEKALQALVGAGALISFDFSDR---WD-----DDYLQLVCPYVDFAFFSASDLSD------EEVKAKLKEAVSRGAK 189 (264)
T ss_pred HHHHHHHHHHHHHcCCEEEEcCccc---CC-----HHHHHhhcccCCEEEechhhcCc------chHHHHHHHHHHcCCC
Confidence 3567788999999999999999864 21 12355678899999999887631 2234566778889999
Q ss_pred EEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCC
Q 015777 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381 (400)
Q Consensus 302 ~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~ 381 (400)
.+|||+|++|++++.+++.+++|+++++++|||||||+|.|||++++++|++ ++++|+++|+++|++++++.|+
T Consensus 190 ~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~------~~~~al~~a~~~aa~~~~~~G~ 263 (264)
T cd01940 190 LVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAGGT------AIAEAMRQGAQFAAKTCGHEGA 263 (264)
T ss_pred EEEEEECCCCeEEEeCCeEEecCCcCCCCCCCCCchHHHHHHHHHHHHhCCc------hHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999998888899999999999999999999999999999974 2899999999999999999995
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. |
| >cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=316.52 Aligned_cols=273 Identities=18% Similarity=0.211 Sum_probs=220.1
Q ss_pred cEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.|+|+|++++|++..+++.|... .......+||++.|+|.+|+|||.++.++|. +|+
T Consensus 1 ~v~~iG~~~vD~~~~v~~~p~~~~~~~~~~~~~~~GG~a~NvA~~la~lG~~~~~~~~-------------------vG~ 61 (290)
T cd01939 1 AVLCVGLTVLDFITTVDKYPFEDSDQRTTNGRWQRGGNASNSCTVLRLLGLSCEFLGV-------------------LSR 61 (290)
T ss_pred CEEEEeeeeeEEEeeecCCCCCCcceEeeeeeEecCCCHHHHHHHHHHcCCceEEEEe-------------------ecC
Confidence 38999999999999999877653 3445778999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++...++..+..++++.+++|+|+++++.. ....++.++++...+++++++|++++..
T Consensus 62 D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 138 (290)
T cd01939 62 GPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSRAGGRTTIVNDN--NLPEVTYDDFSKIDLTQYGWIHFEGRNP- 138 (290)
T ss_pred CHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcCCCCeEEEEeCC--CCCCCCHHHHhhhhhccCCEEEEeccCH-
Confidence 9999999999999999999986666556666777777788998887643 3445677776655668999999987642
Q ss_pred CchhHHHHHHHHHHHhhCC-------CeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAG-------VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA 290 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g-------~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~ 290 (400)
+...++++.+++.+ +++++|++.+. +.+.++++++|++++|++|++.+ +... .++
T Consensus 139 -----~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~----------~~~~~~l~~~di~~~n~~~~~~~-~~~~--~~~ 200 (290)
T cd01939 139 -----DETLRMMQHIEEHNNRRPEIRITISVEVEKPR----------EELLELAAYCDVVFVSKDWAQSR-GYKS--PEE 200 (290)
T ss_pred -----HHHHHHHHHHHHhcCcCCCcceEEEEEeccCc----------hhhhhHHhhCCEEEEEhHHHHhc-CcCC--HHH
Confidence 23456666677665 68889986421 22346888999999999998765 5433 233
Q ss_pred HHHHH--HhCCCcEEEEEecCCcEEEEeC-CceEEEccccc-cccCCCCchHHHHHHHHHHHHcCC-ccccchHHHHHHH
Q 015777 291 VVYKL--FHANLKLLLVTEGPDGCRYYTK-DFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDF-SLLQKEDQLRDAL 365 (400)
Q Consensus 291 ~~~~l--~~~g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~-~~~~~~~~l~~al 365 (400)
.++.+ ...+++.||||+|++|++++.+ ++.+++|++++ ++||||||||+|.|||++++++|+ + +++|+
T Consensus 201 ~~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvDt~GAGDsf~agfl~~l~~g~~~-------~~~a~ 273 (290)
T cd01939 201 CLRGEGPRAKKAALLVCTWGDQGAGALGPDGEYVHSPAHKPIRVVDTLGAGDTFNAAVIYALNKGPDD-------LSEAL 273 (290)
T ss_pred HHHhhhhhccCCcEEEEEcccCCeEEEcCCCCEEEecCCCCCCcccCCCchHHHHHHHHHHHHcCCcc-------HHHHH
Confidence 33332 2457899999999999999886 45778998875 699999999999999999999999 7 99999
Q ss_pred HHHHHHHHHHhcccCC
Q 015777 366 RFANACGALTVMERGA 381 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~ 381 (400)
++|+++|++++++.|.
T Consensus 274 ~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 274 DFGNRVASQKCTGVGF 289 (290)
T ss_pred HHHHHHHHHHHhhhcC
Confidence 9999999999999884
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. |
| >TIGR03828 pfkB 1-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=313.89 Aligned_cols=287 Identities=23% Similarity=0.263 Sum_probs=233.7
Q ss_pred EEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 65 CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 65 viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
|.=++++|++..++++|.. ........+||++.|+|++|++||.++.++|. ||+| +|
T Consensus 4 ~~~~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~v~~is~-------------------vG~D-~g 63 (304)
T TIGR03828 4 VTLNPAIDLTIELDGLTLGEVNRVESTRIDAGGKGINVSRVLKNLGVDVVALGF-------------------LGGF-TG 63 (304)
T ss_pred EEcchHHeEEEEccccccCceeecccccccCCccHHHHHHHHHHcCCCeEEEEE-------------------ecCc-hh
Confidence 3446789999999987721 35567899999999999999999999999999 9999 69
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEcccc
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSIS 215 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~~~ 215 (400)
+.+++.|++.||++++++..+ .|+.++++++.+|+++++.+.+ . .++.++++. +.+++++++|++++.
T Consensus 64 ~~~~~~L~~~gId~~~~~~~~--~t~~~~~~~~~~g~~~~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~ 137 (304)
T TIGR03828 64 DFIEALLREEGIKTDFVRVPG--ETRINVKIKEPSGTETKLNGPG--P--EISEEELEALLEKLRAQLAEGDWLVLSGSL 137 (304)
T ss_pred HHHHHHHHHCCCcceEEECCC--CCeeeEEEEeCCCCEEEEECCC--C--CCCHHHHHHHHHHHHHhccCCCEEEEECCC
Confidence 999999999999999887753 4667777777888887765432 2 234333321 357899999998764
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVV 292 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~ 292 (400)
.. ..+.+.+.++++.+++.++++++|++.. ...+. +...+|++++|++|++.+++....+. .+.+
T Consensus 138 ~~-~~~~~~~~~~~~~~~~~~~~v~~D~~~~--------~~~~~---~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~ 205 (304)
T TIGR03828 138 PP-GVPPDFYAELIALAREKGAKVILDTSGE--------ALRDG---LKAKPFLIKPNDEELEELFGRELKTLEEIIEAA 205 (304)
T ss_pred CC-CCCHHHHHHHHHHHHHcCCEEEEECChH--------HHHHH---HhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHH
Confidence 32 2234677888999999999999998631 11221 23358999999999999998754332 2445
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
+.+++.|.+.||||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|
T Consensus 206 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a~~l~~l~~g~~-------~~~a~~~a~~~A 278 (304)
T TIGR03828 206 RELLDLGAENVLISLGADGALLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESGLS-------LEEALRLAVAAG 278 (304)
T ss_pred HHHHHcCCCEEEEccCCCCcEEEcCCceEEEeCCCccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 6777889999999999999999998888889998899999999999999999999999999 999999999999
Q ss_pred HHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 373 ALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 373 a~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|++.|+ .+|+++++++++.+|
T Consensus 279 a~~~~~~G~--~~p~~~~~~~~~~~~ 302 (304)
T TIGR03828 279 SAAAFSEGT--GLPDPEDIEELLPQV 302 (304)
T ss_pred HHHhcCcCC--CCCCHHHHHHHHhcc
Confidence 999999997 479999999998875
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). |
| >TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=318.18 Aligned_cols=292 Identities=24% Similarity=0.262 Sum_probs=229.3
Q ss_pred CCCcEEEEccceeecccC--cCCCCc------cCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc
Q 015777 59 ESPLVVCFGEMLIDFVPT--VSGLSL------AESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL 130 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~--~~~~~~------~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~ 130 (400)
+.++|+++|++++|.+.. +++.+. .........+|| +.|+|.+|++||.++.++|.
T Consensus 6 ~~~~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~l~~lg~~v~~i~~--------------- 69 (315)
T TIGR02198 6 KGAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEREEDRLGG-AANVARNIASLGARVFLVGV--------------- 69 (315)
T ss_pred CCCcEEEECceeEeeeeeecccccCCCCCCceEEEEEEEecCcH-HHHHHHHHHhcCCceEEEEE---------------
Confidence 356899999999999876 333311 122345677999 79999999999999999999
Q ss_pred CCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCc----cccc--hhhcC
Q 015777 131 PCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE----AELD--LSLIT 204 (400)
Q Consensus 131 ~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~----~~l~--~~~i~ 204 (400)
||+|.+|+++++.|+++||+++++...++.+|+.++++++.++. .+.+. ......++. +.++ .+.++
T Consensus 70 ----vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 142 (315)
T TIGR02198 70 ----VGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLARNQQ-LLRVD--FEERDPINAELEARLLAAIREQLA 142 (315)
T ss_pred ----EecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcCCeE-EEEec--CCCCCCCCHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999988888889999888876432 22222 111111221 1111 24578
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 284 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~ 284 (400)
++|+++++++.. ...+.+....+++.++++|+++++||+.+. ...++++|++++|++|++.+++..
T Consensus 143 ~~~~v~~~~~~~-~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-------------~~~~~~~d~l~~n~~E~~~l~~~~ 208 (315)
T TIGR02198 143 SADAVVLSDYAK-GVLTPRVVQEVIAAARKHGKPVLVDPKGKD-------------FSRYRGATLITPNRKEAEAAVGAC 208 (315)
T ss_pred hCCEEEEecCCC-CccCHHHHHHHHHHHHhcCCCEEEeCCCcc-------------hhhcCCCcEECCCHHHHHHHhCCC
Confidence 999999977532 223456788899999999999999997431 124678999999999999999842
Q ss_pred CC--cHHHHHHHHH-hCCCcEEEEEecCCcEEEEeC-CceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHH
Q 015777 285 DP--YDDAVVYKLF-HANLKLLLVTEGPDGCRYYTK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQ 360 (400)
Q Consensus 285 ~~--~~~~~~~~l~-~~g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~ 360 (400)
.. +..+.++.++ +.|++.|+||+|++|++++.+ +..+++|+++++++|||||||+|.|||++++++|++
T Consensus 209 ~~~~~~~~~~~~l~~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~ag~~~~l~~g~~------- 281 (315)
T TIGR02198 209 DTEAELVQAAEKLLEELDLEALLVTRSEKGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALAAGAS------- 281 (315)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEEcCCCCeEEEecCCCeEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------
Confidence 21 1233444554 468999999999999999884 567889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 361 LRDALRFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 361 l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
+++|+++|+++|+++|++.|+.. ++++++++.|+
T Consensus 282 ~~~al~~A~~~aa~~~~~~G~~~--~~~~~~~~~~~ 315 (315)
T TIGR02198 282 LEEACRLANAAAGVVVGKLGTAT--VSPAELANALQ 315 (315)
T ss_pred HHHHHHHHHHHhhhhhccCCCCC--CCHHHHHHHhC
Confidence 99999999999999999999865 79999988764
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. |
| >cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=314.76 Aligned_cols=279 Identities=25% Similarity=0.293 Sum_probs=221.0
Q ss_pred cEEEEccceeecccCc--CCCCcc------CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 62 LVVCFGEMLIDFVPTV--SGLSLA------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~--~~~~~~------~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
+|+++|+.++|++... ++.+.. ........+|| +.|+|.+|+|||.++.++|.
T Consensus 1 ~vl~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvA~~la~LG~~~~~i~~------------------ 61 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVERISPEAPVPVVKVEREEIRLGG-AANVANNLASLGAKVTLLGV------------------ 61 (304)
T ss_pred CEEEEcceeEEeeEeeccccccCCCCcceEEeeeEEecCcH-HHHHHHHHHHhCCCeEEEEE------------------
Confidence 5899999999998764 333221 22345678999 58999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCcc------ccchhhcCCcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA------ELDLSLITKAK 207 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~------~l~~~~i~~~~ 207 (400)
+|+|.+|+++++.|+++||+++++ ..++.+|+.+++++++ +++.+.++.... ..+..+ +...+.++++|
T Consensus 62 -vG~D~~g~~i~~~l~~~gI~~~~~-~~~~~~t~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~ 136 (304)
T cd01172 62 -VGDDEAGDLLRKLLEKEGIDTDGI-VDEGRPTTTKTRVIAR-NQQLLRVDREDD--SPLSAEEEQRLIERIAERLPEAD 136 (304)
T ss_pred -EcCCccHHHHHHHHHhCCCCcceE-ecCCCCceEEEEEecC-CcEEEEEecCCC--CCCCHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999999985 4566679888888765 455555442221 222222 11124678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc
Q 015777 208 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287 (400)
Q Consensus 208 ~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~ 287 (400)
++|++++.. ...+.+...++++.+++.|+++++|++.+.. ..++++|++++|++|++.+++....+
T Consensus 137 ~v~~s~~~~-~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~-------------~~~~~~d~l~~n~~E~~~l~~~~~~~ 202 (304)
T cd01172 137 VVILSDYGK-GVLTPRVIEALIAAARELGIPVLVDPKGRDY-------------SKYRGATLLTPNEKEAREALGDEIND 202 (304)
T ss_pred EEEEEcCCC-CccCHHHHHHHHHHHHhcCCCEEEeCCCcch-------------hhccCCcEeCCCHHHHHHHhCCCCCC
Confidence 999876432 2233467788899999999999999975320 35678999999999999999875332
Q ss_pred ---HHHHHHHHH-hCCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHH
Q 015777 288 ---DDAVVYKLF-HANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362 (400)
Q Consensus 288 ---~~~~~~~l~-~~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~ 362 (400)
.++.++.++ ..|++.|+||+|++|+++++ +++.+++|++++++||||||||+|+|||+++|++|++ ++
T Consensus 203 ~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~ag~i~~l~~g~~-------~~ 275 (304)
T cd01172 203 DDELEAAGEKLLELLNLEALLVTLGEEGMTLFERDGEVQHIPALAKEVYDVTGAGDTVIATLALALAAGAD-------LE 275 (304)
T ss_pred hHHHHHHHHHHHHHhCCCeEEEEcCCCccEEEcCCCcEEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HH
Confidence 234455555 46899999999999999998 7778999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC
Q 015777 363 DALRFANACGALTVMERGAIPAL 385 (400)
Q Consensus 363 ~al~~A~a~Aa~~v~~~G~~~~~ 385 (400)
+|+++|+++|+++|++.|+.+.+
T Consensus 276 ~al~~a~a~Aa~~~~~~g~~~~~ 298 (304)
T cd01172 276 EAAFLANAAAGVVVGKVGTAPVT 298 (304)
T ss_pred HHHHHHHHHhheeeecCCCCCcC
Confidence 99999999999999999987643
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. |
| >PRK09813 fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=304.21 Aligned_cols=259 Identities=25% Similarity=0.283 Sum_probs=212.2
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
++|+++|++++|++.+.+ +..+||++.|+|++|++||.++.++|. +|+|.+
T Consensus 1 ~~v~~iG~~~~D~~~~~~----------~~~~GG~~~NvA~~l~~lG~~~~~is~-------------------vG~D~~ 51 (260)
T PRK09813 1 KKLATIGDNCVDIYPQLG----------KAFSGGNAVNVAVYCTRYGIQPGCITW-------------------VGDDDY 51 (260)
T ss_pred CeEEEeccceeeecccCC----------ccccCccHHHHHHHHHHcCCcceEEEE-------------------ecCcHH
Confidence 479999999999997643 368999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCch
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEP 220 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~ 220 (400)
|+++++.|++.||+++++...++ +|+.+++.++ +|+|++..+. .+....+..++.+.+.+++++++|++.+.
T Consensus 52 g~~i~~~l~~~gI~~~~~~~~~~-~t~~~~~~~~-~~~r~~~~~~-~~~~~~~~~~~~~~~~l~~~~~v~~~~~~----- 123 (260)
T PRK09813 52 GTKLKQDLARMGVDISHVHTKHG-VTAQTQVELH-DNDRVFGDYT-EGVMADFALSEEDYAWLAQYDIVHAAIWG----- 123 (260)
T ss_pred HHHHHHHHHHcCCcchheeeecC-CCceEEEEEe-CCcEEeeccC-CCcccccccCHHHHHHHHhCCEEEEeccc-----
Confidence 99999999999999999987665 7888888775 6888876543 22222222222233567899999986431
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCC
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL 300 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~ 300 (400)
...++++.++++|+++++|++.+.. .+.+.++++++|+++.|+++. ..+.++.++.+.+.|+
T Consensus 124 ---~~~~~~~~~~~~~~~v~~D~~~~~~--------~~~~~~~~~~~d~~~~~~~~~-------~~~~~~~~~~~~~~g~ 185 (260)
T PRK09813 124 ---HAEDAFPQLHAAGKLTAFDFSDKWD--------SPLWQTLVPHLDYAFASAPQE-------DEFLRLKMKAIVARGA 185 (260)
T ss_pred ---hHHHHHHHHHHcCCeEEEEcCCCcc--------HHHHHHhCCceeEEEecCCcc-------hHHHHHHHHHHHHcCC
Confidence 1245677788999999999975421 123556889999999886541 1223456677888999
Q ss_pred cEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccC
Q 015777 301 KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 380 (400)
Q Consensus 301 ~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G 380 (400)
+.++||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|
T Consensus 186 ~~viit~G~~Ga~~~~~~~~~~~~~~~~~~vDttGAGDaF~ag~i~~~~~g~~-------~~~al~~a~~~aa~~~~~~G 258 (260)
T PRK09813 186 GVVIVTLGENGSIAWDGAQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMT-------LPQAMAQGTACAAKTIQYHG 258 (260)
T ss_pred CEEEEEECCCceEEEECCEEEecCCcccCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998888999999999999999999999999999999999 99999999999999999998
Q ss_pred C
Q 015777 381 A 381 (400)
Q Consensus 381 ~ 381 (400)
+
T Consensus 259 ~ 259 (260)
T PRK09813 259 A 259 (260)
T ss_pred C
Confidence 5
|
|
| >PRK13508 tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=308.77 Aligned_cols=289 Identities=22% Similarity=0.234 Sum_probs=230.2
Q ss_pred EEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 63 VVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 63 v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
+.+-.++++|.+..+++.+.. ........+||++.|+|++|++||.++.++|. +|+ .
T Consensus 3 ~~~t~np~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------vGd-~ 62 (309)
T PRK13508 3 LTVTLNPSIDISYPLDELKLDTVNRVVDVSKTAGGKGLNVTRVLSEFGENVLATGL-------------------IGG-E 62 (309)
T ss_pred EEEecChHHeEEEEeCCeeeCCeEEecceeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ecC-h
Confidence 456678999999888877554 24467889999999999999999999999999 995 7
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEEEEcc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGS 213 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v~~~~ 213 (400)
+|+++++.|++ ||++++++. ++ .|+.++++++ +|+++++++++. . +..++.. .+.++++|++|+++
T Consensus 63 ~G~~i~~~l~~-gI~~~~~~~-~~-~t~~~~~~~~-~g~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~v~~~g 134 (309)
T PRK13508 63 LGQFIAEHLDD-QIKHAFYKI-KG-ETRNCIAILH-EGQQTEILEKGP--E--ISVQEADGFLHHFKQLLESVEVVAISG 134 (309)
T ss_pred hHHHHHHHHHc-CCCceEEEC-CC-CCeeeEEEEe-CCCEEEEECCCC--C--CCHHHHHHHHHHHHHhccCCCEEEEeC
Confidence 89999999999 999987654 33 5677777665 788888776432 2 2222211 24578999999987
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC-cHH---
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDD--- 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-~~~--- 289 (400)
.... ..+.+...++++.+++.|+++++|++.. .. ..+...+.++|++++|++|++.+++.... +.+
T Consensus 135 ~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~-~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~ 204 (309)
T PRK13508 135 SLPA-GLPVDYYAQLIELANQAGKPVVLDCSGA--------AL-QAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELK 204 (309)
T ss_pred CCCC-CcCHHHHHHHHHHHHHCCCEEEEECCcH--------HH-HHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHH
Confidence 6432 2234667788899999999999999631 11 22222356899999999999999987532 222
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.++..|++.|+||+|++|++++.+++.+++|++++++||||||||+|+|||+++|++|++ +++|+++|+
T Consensus 205 ~~~~~~~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Agfi~~l~~g~~-------~~~al~~a~ 277 (309)
T PRK13508 205 EVLQQPLFEGIEWIIVSLGADGAFAKHNDTFYKVDIPKIEVVNPVGSGDSTVAGIASGLLHQED-------DADLLKKAN 277 (309)
T ss_pred HHHHHHHHcCCCEEEEecCCCceEEEeCCceEEEeCCCccccCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 3334555679999999999999999988888889999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++.+.. ..+++++++++++|
T Consensus 278 a~aa~~~~~~~~~--~~~~~~~~~~~~~i 304 (309)
T PRK13508 278 VLGMLNAQEKQTG--HVNMANYDELYNQI 304 (309)
T ss_pred HHHHHHhcCcCcC--CCCHHHHHHHHhce
Confidence 9999999999974 57889999998876
|
|
| >PRK09513 fruK 1-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=306.22 Aligned_cols=289 Identities=17% Similarity=0.160 Sum_probs=234.8
Q ss_pred EE-EEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 63 VV-CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 63 v~-viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+ |.=+.++|++..+++.+.. +.......+||++.|+|+++++||.++.++|. +|+|
T Consensus 5 ~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~i~~-------------------vG~D 65 (312)
T PRK09513 5 VATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGF-------------------LGKD 65 (312)
T ss_pred EEEEecChHHeEEEEcCceecCCeeeecceeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ecCc
Confidence 55 4458999999988887632 35677899999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEEEEc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYG 212 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v~~~ 212 (400)
.+|+. ++.|+++||++.+++ .++ +|+.++++++.+|+++++.+.. . .++..+++ .+.++++|++|++
T Consensus 66 ~~~~~-~~~l~~~gv~~~~~~-~~~-~t~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~d~v~~~ 138 (312)
T PRK09513 66 NQDGF-QQLFSELGIANRFQV-VQG-RTRINVKLTEKDGEVTDFNFSG--F--EVTPADWERFVTDSLSWLGQFDMVAVS 138 (312)
T ss_pred cHHHH-HHHHHHcCCCccEEE-CCC-CCEEEEEEEeCCCcEEEEeCCC--C--CCCHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 99987 689999999987664 344 6888888888889887665422 1 23333221 2457899999998
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHH---
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD--- 289 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~--- 289 (400)
++... ....+...++++.+++.|.++++|++. ...++. +...+|++++|++|+..+++....+.+
T Consensus 139 g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~---~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~ 206 (312)
T PRK09513 139 GSLPR-GVSPEAFTDWMTRLRSQCPCIIFDSSR--------EALVAG---LKAAPWLVKPNRRELEIWAGRKLPELKDVI 206 (312)
T ss_pred CCCCC-CCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHH---hccCCeEEcCCHHHHHHHhCCCCCCHHHHH
Confidence 76432 334567778899999999999999962 112222 345789999999999999997654433
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.+.+.|++.|+||+|++|++++.+++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+
T Consensus 207 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~-------~~~a~~~A~ 279 (312)
T PRK09513 207 EAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRES-------SEHTLRLAT 279 (312)
T ss_pred HHHHHHHHcCCCEEEEEeCCCCcEEEeCCceEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 3456777889999999999999999888877888888899999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++.| .++|+++++++++.+|
T Consensus 280 a~Aa~~~~~~~--~~~~~~~e~~~~l~~~ 306 (312)
T PRK09513 280 AVSALAVSQSN--VGITDRPQLAAMMARV 306 (312)
T ss_pred HHHHHHhhCCC--CCCCCHHHHHHHHhce
Confidence 99999999998 4789999999998775
|
|
| >cd01943 MAK32 MAK32 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=316.70 Aligned_cols=277 Identities=17% Similarity=0.200 Sum_probs=227.5
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHc-CC--Cc--eeeecccccccccceeeeccCCCcCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL-GG--SS--AFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larL-G~--~~--~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+++++|++++|++...+. ..+...+||++.|+|+++++| |. ++ .+++. +|
T Consensus 1 ~~~~~G~~~~d~i~~~~~------~~~~~~~GG~~~N~A~~~~~l~g~~~~~~~~~~~~-------------------vG 55 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------EPVTNVLGGAGTYAILGARLFLPPPLSRSISWIVD-------------------KG 55 (328)
T ss_pred CccccCcEEeeccccCCC------CccccccCCchhhHhhceeeecCCccccceeeEEe-------------------cC
Confidence 478999999999998652 356778999999999999999 44 66 88999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+| +|+++++.|+++||++++ ...++.+|+.+++.++++|+|.+.+++ +....++.++++...+..++++|+.+...
T Consensus 56 ~D-~G~~l~~~L~~~GVd~~~-~~~~~~~Tg~~~v~~~~~g~r~~~~~~--~~~~~~~~~~l~~~~~~~a~~~hl~~~~~ 131 (328)
T cd01943 56 SD-FPKSVEDELESWGTGMVF-RRDPGRLTTRGLNIYDGNDRRFFKYLT--PKKRIDVSDDLNSTPLIRSSCIHLICSPE 131 (328)
T ss_pred CC-CCHHHHHHHHhcCCceEE-EeCCCCcchhhhhhcCCCCcceeeecC--cccccccccccccccccCCCeEEEECCHH
Confidence 99 999999999999999998 777778999999988888898877763 34466777778766788999999976532
Q ss_pred cCchhHHHHHHHHHHHhh------CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH--
Q 015777 217 ITEPCKSAHIAAAKAAKD------AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD-- 288 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~------~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~-- 288 (400)
...+...++++.+++ .+..+++|+++... ....++.+.++++++|++++|++|++.+++......
T Consensus 132 ---~~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~----~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~ 204 (328)
T cd01943 132 ---RCASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSC----DPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSS 204 (328)
T ss_pred ---HHHHHHHHHHHHHHhhccccCCccEEEEecCCccc----ChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccc
Confidence 124677888888888 88999999874211 111345577899999999999999999999765321
Q ss_pred -HHHH-----H---HHHhCCCcEEEEEecCCcEEEEe--CCceEEEccccc---cccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 289 -DAVV-----Y---KLFHANLKLLLVTEGPDGCRYYT--KDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 289 -~~~~-----~---~l~~~g~~~vvvT~G~~G~~~~~--~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
.+.. . .+...+.+.||||+|++|++++. ++..+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~- 283 (328)
T cd01943 205 DEEKEAVLQALLFSGILQDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALTKS- 283 (328)
T ss_pred hhhhhhhHHHHHHHhhhccCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcCCC-
Confidence 1111 1 22456899999999999999988 456788999988 9999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCC
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGA 381 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~ 381 (400)
+++|+++|+++|++++++.|.
T Consensus 284 ------~~~al~~a~a~Aa~~v~~~G~ 304 (328)
T cd01943 284 ------IDEACIYGSVAASFAIEQVGL 304 (328)
T ss_pred ------HHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999995
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. |
| >cd01941 YeiC_kinase_like YeiC-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=303.31 Aligned_cols=276 Identities=27% Similarity=0.319 Sum_probs=222.9
Q ss_pred cEEEEccceeecccCcCCCCccC---CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~---~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
.|+++|++++|++..+++.|.+. .......+||+++|+|+++++||.++.++|. +|+|
T Consensus 1 ~v~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~~~-------------------lG~D 61 (288)
T cd01941 1 EIVVIGAANIDLRGKVSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSA-------------------VGDD 61 (288)
T ss_pred CeEEEEeEEEeeeecccCccccCCCCCeeEEEccCcHHHHHHHHHHHhCCCcEEEEE-------------------EecC
Confidence 38999999999998888765432 2346788999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEccccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISL 216 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~~~~~ 216 (400)
.+|+.+++.|++.||+++++. .++.+|+.+++.++.+|++++... .+.....+..+.++ .+.+.+++++++.+.
T Consensus 62 ~~g~~i~~~L~~~gI~~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~-- 137 (288)
T cd01941 62 SEGESILEESEKAGLNVRGIV-FEGRSTASYTAILDKDGDLVVALA-DMDIYELLTPDFLRKIREALKEAKPIVVDAN-- 137 (288)
T ss_pred ccHHHHHHHHHHcCCccceee-eCCCCcceEEEEECCCCCEEEEEe-chHhhhhCCHHHHHHHHHHHhcCCEEEEeCC--
Confidence 999999999999999999887 567789999999999999887432 23333333332221 356789999987542
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---HHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---DDAVVY 293 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~ 293 (400)
.+++....+++.+++.+.++++|++.. +.+++. .++++++|++++|++|++.+++....+ ..+.++
T Consensus 138 ---~~~~~~~~~~~~a~~~~~~v~~d~~~~-------~~~~~~-~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~ 206 (288)
T cd01941 138 ---LPEEALEYLLALAAKHGVPVAFEPTSA-------PKLKKL-FYLLHAIDLLTPNRAELEALAGALIENNEDENKAAK 206 (288)
T ss_pred ---CCHHHHHHHHHhhhhcCCcEEEEccch-------HHhccc-hhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHH
Confidence 234567788888999999999998632 111221 157889999999999999999875422 123456
Q ss_pred HHHhCCCcEEEEEecCCcEEEEeC---CceEEEcc-ccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 294 KLFHANLKLLLVTEGPDGCRYYTK---DFSGRVQG-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 294 ~l~~~g~~~vvvT~G~~G~~~~~~---~~~~~vpa-~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
.+...+++.++||+|++|++++++ +..+++|+ +++++||||||||+|.|||++++++|++ +++|+++|+
T Consensus 207 ~~~~~~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~~~~~~vDttGAGDaf~a~~~~~l~~g~~-------~~~al~~a~ 279 (288)
T cd01941 207 ILLLPGIKNVIVTLGAKGVLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMS-------LDDSLRFAQ 279 (288)
T ss_pred HHHHcCCcEEEEEeCCCcEEEEecCCCceeEEecCCCCccceeCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 677889999999999999999987 46678898 5889999999999999999999999999 999999999
Q ss_pred HHHHHHhcc
Q 015777 370 ACGALTVME 378 (400)
Q Consensus 370 a~Aa~~v~~ 378 (400)
++|+++|+.
T Consensus 280 ~~Aa~~~~~ 288 (288)
T cd01941 280 AAAALTLES 288 (288)
T ss_pred HHHHHHhcC
Confidence 999999863
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >PRK10294 6-phosphofructokinase 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=303.55 Aligned_cols=290 Identities=21% Similarity=0.220 Sum_probs=232.8
Q ss_pred EEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 64 VCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 64 ~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
.+-=+..+|.+..+++.+.. ........+||++.|+|++|++||.++.+++. +|+ .+
T Consensus 6 ~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~i~~-------------------vG~-~~ 65 (309)
T PRK10294 6 TLTLAPSLDSATITPQIYPEGKLRCSAPVFEPGGGGINVARAIAHLGGSATAIFP-------------------AGG-AT 65 (309)
T ss_pred EEecChHHeEEEEeCceeeCCeEEeccceecCCccHHHHHHHHHHcCCCeEEEEE-------------------ecC-cc
Confidence 34458899999998876532 45667888999999999999999999999999 996 79
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch-----hhcCCccEEEEcccc
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-----SLITKAKIFHYGSIS 215 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~-----~~i~~~~~v~~~~~~ 215 (400)
|+++++.|++.||++++++..++. +...++..+++|++.++++.+ .. ++.++++. +.+++++++|++++.
T Consensus 66 g~~i~~~l~~~gv~~~~~~~~~~~-~~~~~i~~~~~g~~~~~~~~~--~~--~~~~~~~~l~~~~~~~~~~~~~~i~g~~ 140 (309)
T PRK10294 66 GEHLVSLLADENVPVATVEAKDWT-RQNLHVHVEASGEQYRFVMPG--AA--LNEDEFRQLEEQVLEIESGAILVISGSL 140 (309)
T ss_pred HHHHHHHHHHcCCCceEEECCCCC-eeeEEEEEcCCCcEEEEECCC--CC--CCHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 999999999999999999876553 444456677788887666532 22 44444332 236788999997754
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVV 292 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~ 292 (400)
. ...+.+.+.++++.+++.|+++++|++. +..++.+ .++++|++++|++|+..|++....+. ++++
T Consensus 141 ~-~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~~--~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~ 209 (309)
T PRK10294 141 P-PGVKLEKLTQLISAAQKQGIRCIIDSSG--------DALSAAL--AIGNIELVKPNQKELSALVNRDLTQPDDVRKAA 209 (309)
T ss_pred C-CCCCHHHHHHHHHHHHHcCCeEEEeCCC--------HHHHHHH--hcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHH
Confidence 3 2334577889999999999999999862 1222221 24589999999999999998764433 2456
Q ss_pred HHHHhCC-CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 293 YKLFHAN-LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 293 ~~l~~~g-~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.+++.+ ++.|+||+|++|++++.+++.+++++++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 210 ~~l~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~ag~l~~l~~g~~-------~~~al~~a~a~ 282 (309)
T PRK10294 210 QELVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAA 282 (309)
T ss_pred HHHHHcCCCCEEEEecCCCceEEEcCCccEEEeCCCcccCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 6777776 899999999999999988878889999999999999999999999999999999 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 372 GALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|+++|++.|+++ .++++++++++++
T Consensus 283 aa~~v~~~G~~~--~~~~~~~~~~~~~ 307 (309)
T PRK10294 283 GSAATLNQGTRL--CSHDDTQKIYAYL 307 (309)
T ss_pred HHHHhcCCCCCC--CCHHHHHHHHHHh
Confidence 999999999864 6888898888765
|
|
| >TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=303.98 Aligned_cols=284 Identities=27% Similarity=0.312 Sum_probs=229.0
Q ss_pred cceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHH
Q 015777 68 EMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYML 144 (400)
Q Consensus 68 ~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i 144 (400)
++.+|++..+++.+.. ........+||.+.|+|++++|||.++.++|. +|+| +|+.+
T Consensus 7 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l~~lg~~~~~i~~-------------------vG~D-~g~~i 66 (303)
T TIGR03168 7 NPAIDLTIEVDGLTPGEVNRVAAVRKDAGGKGINVARVLARLGAEVVATGF-------------------LGGF-TGEFI 66 (303)
T ss_pred chHHeEEEEcCccccCceeecCcccccCCcchhhHHHHHHHcCCCeEEEEE-------------------eCCc-hhHHH
Confidence 4567887777765321 34466789999999999999999999999999 9998 79999
Q ss_pred HHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEccccccC
Q 015777 145 ADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLIT 218 (400)
Q Consensus 145 ~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~~~~~~ 218 (400)
++.|++.||++++++... .|++++++.+.+|++..+.+.+ . .++.++++. +.+++++++|++++...
T Consensus 67 ~~~l~~~gI~~~~i~~~~--~t~~~~~~~~~~g~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~- 139 (303)
T TIGR03168 67 EALLAEEGIKNDFVEVKG--ETRINVKIKESSGEETELNEPG--P--EISEEELEQLLEKLRELLASGDIVVISGSLPP- 139 (303)
T ss_pred HHHHHHcCCCceEEECCC--CCEEeEEEEeCCCCEEEEeCcC--C--CCCHHHHHHHHHHHHHhccCCCEEEEeCCCCC-
Confidence 999999999999887653 4666777777788776655422 2 244444331 34789999999775322
Q ss_pred chhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHHH
Q 015777 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKL 295 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l 295 (400)
..+.+.+..+++.++++|+++++|++. ...++ .+..++|++++|++|+..+++....+. .+.++.+
T Consensus 140 ~~~~~~~~~~~~~~~~~g~~v~~D~~~--------~~~~~---~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l 208 (303)
T TIGR03168 140 GVPPDFYAQLIAIARKRGAKVILDTSG--------EALRE---ALAAKPFLIKPNHEELEELFGRELKTEEEIIEAAREL 208 (303)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCc--------HHHHH---HHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 233566778889999999999999963 11222 233479999999999999999754332 3456677
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
..++.+.+|||+|.+|++++.+++.+++|+++++++|||||||+|.|+|++++++|++ +++|+++|+++|+++
T Consensus 209 ~~~g~~~vviT~g~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~F~a~~~~~l~~g~~-------i~~a~~~A~~~aa~~ 281 (303)
T TIGR03168 209 LDRGAENVLVSLGADGALLVTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLS-------LEEALRFAVAAGSAA 281 (303)
T ss_pred HHcCCCEEEEeecCCCcEEEeCCceEEeeCCcceeecCcCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 8889999999999999999999888899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|++.|+. .|+++++++++.++
T Consensus 282 ~~~~G~~--~~~~~~~~~~~~~~ 302 (303)
T TIGR03168 282 AFSPGTG--LPDPEDVEELLDQV 302 (303)
T ss_pred hcCCCcC--CCCHHHHHHHHhhc
Confidence 9999984 58999999988764
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. |
| >TIGR01231 lacC tagatose-6-phosphate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=305.24 Aligned_cols=292 Identities=19% Similarity=0.185 Sum_probs=227.8
Q ss_pred EEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 65 CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 65 viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
|.=+..+|....+++.+.. ...++...+||++.|+|++|++||.++.++|. +|+ .+|
T Consensus 4 ~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~-------------------vG~-~~G 63 (309)
T TIGR01231 4 VTLNPSVDISYPLTALKLDTVNRVQEVSKTAGGKGLNVTRVLAQVGDPVLASGF-------------------LGG-KLG 63 (309)
T ss_pred EEcchHHeEEEEcCCeeeCceEeeceeeecCCccHHHHHHHHHHcCCCeEEEEE-------------------ecC-hhH
Confidence 3346678887777765543 34567889999999999999999999999999 997 599
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCcccc--chhhcCCccEEEEccccccCc
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL--DLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l--~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+++++.|++.||+++++...+ .|+.++.++. +|+++++++++.........+.+ ..+.+++++++|+++.... .
T Consensus 64 ~~i~~~l~~~GV~~~~~~~~~--~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~ 139 (309)
T TIGR01231 64 EFIEKELDHSDIKHAFYKISG--ETRNCIAILH-EGQQTEILEQGPEISNQEAAGFLKHFEQLLEKVEVVAISGSLPK-G 139 (309)
T ss_pred HHHHHHHHHcCCceeEEECCC--CCEEeEEEEe-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHhccCCEEEEECCCCC-C
Confidence 999999999999999887654 3555555553 68888877644221110111111 1245789999999876432 2
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC-cHH---HHHHHH
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDD---AVVYKL 295 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-~~~---~~~~~l 295 (400)
.+.....++++.++++|+++++|++++ .. ..+.+.+.++|++++|++|++.+++.... +.+ +.++.+
T Consensus 140 ~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~-~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~~~ 210 (309)
T TIGR01231 140 LPQDYYAQIIERCQNKGVPVVLDCSGA--------TL-QTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALSQP 210 (309)
T ss_pred cCHHHHHHHHHHHHhCCCeEEEECChH--------HH-HHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 335677889999999999999999742 11 22334467899999999999999986432 222 234455
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
...|++.|++|+|++|++++.+++.+++|++++++||||||||+|+|||++++++|++ +++|+++|+++|+++
T Consensus 211 ~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~agfl~~l~~g~~-------~~~a~~~a~a~aa~~ 283 (309)
T TIGR01231 211 LFSGIEWIIVSLGAQGAFAKHGHTFYKVNIPTISVVNPVGSGDSTVAGITSALLNHES-------DHDLLKKANTLGMLN 283 (309)
T ss_pred HHcCCCEEEEccCCCceEEEeCCeeEEeeCCccCcCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 5679999999999999999998888889999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++.++ +..+++++++++.+|
T Consensus 284 ~~~~~~--~~~~~~~~~~~~~~i 304 (309)
T TIGR01231 284 AQEAQT--GHVNLNNYDDLFNQI 304 (309)
T ss_pred hcCccc--CCCCHHHHHHHHhce
Confidence 999886 457899999998876
|
This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. |
| >PLN02548 adenosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=303.80 Aligned_cols=263 Identities=20% Similarity=0.261 Sum_probs=208.5
Q ss_pred CCCceecCCChHHHHHHH---HHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceec
Q 015777 85 SPAFKKAPGGAPANVAVG---IARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFD 161 (400)
Q Consensus 85 ~~~~~~~~GG~~~N~A~~---larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~ 161 (400)
.......+||++.|++.. ++++|.++.++|. +|+|.+|+++++.|+++||+++++..
T Consensus 44 ~~~~~~~~GG~~~Nva~~a~~l~~lg~~~~~ig~-------------------vG~D~~g~~i~~~L~~~gVd~~~~~~- 103 (332)
T PLN02548 44 KYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGC-------------------IGKDKFGEEMKKCATAAGVNVHYYED- 103 (332)
T ss_pred cCCceecCCcHHHHHHHHHHHHhcCCCcEEEEEE-------------------EcCChhHHHHHHHHHHcCCceeeecc-
Confidence 456788999999997554 4667999999999 99999999999999999999998754
Q ss_pred CCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc----hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCC
Q 015777 162 PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 237 (400)
Q Consensus 162 ~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~----~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~ 237 (400)
++.+|+.+++.++ +|+|+++.+. ++...++.+++. .+.++.++++|++++... .+.+....+++.++++|+
T Consensus 104 ~~~~T~~~~i~~~-~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~ 178 (332)
T PLN02548 104 ESTPTGTCAVLVV-GGERSLVANL--SAANCYKVEHLKKPENWALVEKAKFYYIAGFFLT--VSPESIMLVAEHAAANNK 178 (332)
T ss_pred CCCCCceEEEEEe-cCCceeeecc--chhhcCCHHHhcChhhHhHHhhCCEEEEEEEEcc--CCHHHHHHHHHHHHHcCC
Confidence 6678999998886 7899887653 333344444332 245788999999886442 234667788888999999
Q ss_pred eEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC---CcHHHHHHHHHhC------CCcEEEEEec
Q 015777 238 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED---PYDDAVVYKLFHA------NLKLLLVTEG 308 (400)
Q Consensus 238 ~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~---~~~~~~~~~l~~~------g~~~vvvT~G 308 (400)
++.+|++. .+|. +..++.++++++++|++++|++|++.+++... .+.++.++.+... +++.+|||+|
T Consensus 179 ~~~~~~~~--~~~~--~~~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~g~~~~~vvvT~G 254 (332)
T PLN02548 179 TFMMNLSA--PFIC--EFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPKASGTHKRTVVITQG 254 (332)
T ss_pred EEEEECCC--hhHH--HHhHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhhhccccCCEEEEEeC
Confidence 88777742 3332 22345678889999999999999999988643 2233444444321 5889999999
Q ss_pred CCcEEEEeCCceEEEccc---cccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 309 PDGCRYYTKDFSGRVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 309 ~~G~~~~~~~~~~~vpa~---~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
++|++++.+++.+++|++ ++++||||||||+|+|||++++++|++ +++|+++|+++|+++|++.|+.+
T Consensus 255 ~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~eal~~a~aaAa~~v~~~G~~~ 325 (332)
T PLN02548 255 ADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKD-------IEECVRAGNYAANVIIQRSGCTY 325 (332)
T ss_pred CCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCCC
Confidence 999999998888888764 347999999999999999999999999 99999999999999999999864
|
|
| >cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=294.79 Aligned_cols=273 Identities=25% Similarity=0.252 Sum_probs=221.9
Q ss_pred EEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 63 VVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 63 v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
..++|+.++|++..+++.+.. ........+||.+.|+|++|++||.++.++|. +|+|
T Consensus 3 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~v~~is~-------------------vG~D- 62 (289)
T cd01164 3 YTVTLNPAIDLTIELDQLQPGEVNRVSSTRKDAGGKGINVARVLKDLGVEVTALGF-------------------LGGF- 62 (289)
T ss_pred EEEecChHHeEEEEcCcccCCceeecccccccCCcchhHHHHHHHHcCCCeEEEEE-------------------ccCc-
Confidence 468899999999999987643 35567889999999999999999999999999 9998
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEcc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGS 213 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~ 213 (400)
+|+++++.|++.||++++++... .|++.+++.+.+|+++.+... +. .++.++++. +.+++++++|+++
T Consensus 63 ~g~~i~~~l~~~gi~~~~~~~~~--~t~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~g 136 (289)
T cd01164 63 TGDFFEALLKEEGIPDDFVEVAG--ETRINVKIKEEDGTETEINEP--GP--EISEEELEALLEKLKALLKKGDIVVLSG 136 (289)
T ss_pred hhHHHHHHHHHcCCCceEEECCC--CCEEEEEEEeCCCCEEEEeCC--CC--CCCHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 89999999999999999887653 467777777766776655432 22 244443321 3467899999976
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhHHhcccCCCCCc---HH
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISFLTQGEDPY---DD 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E~~~l~~~~~~~---~~ 289 (400)
.... ....+....+++.+++.++++++|++.+ ..+ +++ +.+|++++|++|++.+++....+ ..
T Consensus 137 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~~~--------~~~----~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~ 203 (289)
T cd01164 137 SLPP-GVPADFYAELVRLAREKGARVILDTSGE--------ALL----AALAAKPFLIKPNREELEELFGRPLGDEEDVI 203 (289)
T ss_pred CCCC-CcCHHHHHHHHHHHHHcCCeEEEECChH--------HHH----HHHhcCCcEECCCHHHHHHHhCCCCCCHHHHH
Confidence 5321 2234567788888999999999999631 122 233 69999999999999999875433 23
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.+++.+++.++||+|++|++++.+++.+++++++++++|||||||+|.|||++++++|++ +++|+++|+
T Consensus 204 ~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------~~~a~~~A~ 276 (289)
T cd01164 204 AAARKLIERGAENVLVSLGADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLS-------LEEALRLAV 276 (289)
T ss_pred HHHHHHHHcCCCEEEEecCCCCCEEEcCCcEEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 4566788889999999999999999988888899999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCC
Q 015777 370 ACGALTVMERGA 381 (400)
Q Consensus 370 a~Aa~~v~~~G~ 381 (400)
++|+++|++.|+
T Consensus 277 ~~Aa~~~~~~G~ 288 (289)
T cd01164 277 AAGSATAFSPGT 288 (289)
T ss_pred HHHHHHhcCccC
Confidence 999999999985
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. |
| >PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=312.28 Aligned_cols=288 Identities=21% Similarity=0.215 Sum_probs=225.7
Q ss_pred CcEEEEccceeecccCcC--CC----C--ccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCC
Q 015777 61 PLVVCFGEMLIDFVPTVS--GL----S--LAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPC 132 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~--~~----~--~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~ 132 (400)
++|+|||++++|++..++ +. | ..........+|| ++|+|++|++||.++.++|.
T Consensus 11 ~~ilviG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~la~LG~~v~~i~~----------------- 72 (473)
T PRK11316 11 AGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVNQIEERPGG-AANVAMNIASLGAQARLVGL----------------- 72 (473)
T ss_pred CcEEEECccEEeeeeecccceeCCCCCCCEEEeeeEEecCcH-HHHHHHHHHHcCCcEEEEEE-----------------
Confidence 479999999999997642 22 2 1234567788999 59999999999999999999
Q ss_pred CcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc---hhhcCCccEE
Q 015777 133 PKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD---LSLITKAKIF 209 (400)
Q Consensus 133 ~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~---~~~i~~~~~v 209 (400)
+|+|.+|+++++.|++.||+++++.. ++.+|+.++++++.+++...... ......+..+.+. .+.+++++++
T Consensus 73 --vG~D~~g~~i~~~L~~~gI~~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~~~v 147 (473)
T PRK11316 73 --TGIDEAARALSKLLAAVGVKCDFVSV-PTHPTITKLRVLSRNQQLIRLDF--EEGFEGVDPQPLLERIEQALPSIGAL 147 (473)
T ss_pred --EcCCHHHHHHHHHHHHcCCceeEEEc-CCCCCCeeEEEEeCCceEEeccc--ccCCCchhHHHHHHHHHHHhccCCEE
Confidence 99999999999999999999998876 56679888888875544222111 1111122333221 2568899999
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH-
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD- 288 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~- 288 (400)
|++++.... .+...++++.++++|+++++||+... ...++.+|++++|++|++.+++......
T Consensus 148 ~is~~~~~~---~~~~~~~~~~~k~~g~~vv~Dp~~~~-------------~~~~~~~dil~pN~~Ea~~l~g~~~~~~~ 211 (473)
T PRK11316 148 VLSDYAKGA---LASVQAMIQLARKAGVPVLIDPKGTD-------------FERYRGATLLTPNLSEFEAVVGKCKDEAE 211 (473)
T ss_pred EEecCCccc---hhHHHHHHHHHHhcCCeEEEeCCCCC-------------ccccCCCeEECcCHHHHHHHhCCCCCHHH
Confidence 997664311 24567888899999999999997421 1235689999999999999998532211
Q ss_pred -HHHHHHH-HhCCCcEEEEEecCCcEEEEeCCc-eEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHH
Q 015777 289 -DAVVYKL-FHANLKLLLVTEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 365 (400)
Q Consensus 289 -~~~~~~l-~~~g~~~vvvT~G~~G~~~~~~~~-~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al 365 (400)
.+.++++ .+.|++.++||+|.+|++++.+++ .+++|+++++++||+||||+|.|||+++|++|++ +++|+
T Consensus 212 ~~~~~~~l~~~~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~aa~~~~l~~g~~-------~~~al 284 (473)
T PRK11316 212 LVEKGMKLIADYDLSALLVTRSEQGMTLLQPGKAPLHLPTQAREVYDVTGAGDTVISVLAAALAAGNS-------LEEAC 284 (473)
T ss_pred HHHHHHHHHHhcCCCEEEEEecCCCcEEEecCCceEEecCcCCCCCCCCCCcHHHHHHHHHHHHcCCC-------HHHHH
Confidence 2233444 467999999999999999888775 5789999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 366 RFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
++|+++|++++++.|+.+ ++.+++++++.
T Consensus 285 ~~A~a~Aa~~v~~~G~~~--~~~~~l~~~l~ 313 (473)
T PRK11316 285 ALANAAAGVVVGKLGTST--VSPIELENALR 313 (473)
T ss_pred HHHHHHHHhhcccCCCcc--CCHHHHHHHHh
Confidence 999999999999999864 78999999887
|
|
| >PLN02630 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=291.58 Aligned_cols=273 Identities=20% Similarity=0.231 Sum_probs=220.3
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.+.++|+|||++++|++....+ .....+||+++|+|.+|+|||.++.++|+ +|+
T Consensus 9 ~~~~~vlvvG~~~~D~i~~~g~-------~~~~~~GG~a~N~A~alarLG~~~~lis~-------------------VG~ 62 (335)
T PLN02630 9 IPQRRVLIVGNYCHDVLIQNGS-------VTAESLGGAASFISNVLDALSVECELVSK-------------------VGP 62 (335)
T ss_pred CCCCCEEEEeeeeeeEEEeCCc-------EEEEecCcHHHHHHHHHHHcCCceEEEEE-------------------ecC
Confidence 5667899999999999977532 24678999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcC-----CCCeeEEEecCCCccccCCccccchhhcCCccEEEEc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRS-----DGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYG 212 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~-----~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~ 212 (400)
|.. .+|+...+.. ++.+|+.+++++++ +|+++++.. .+++..+++++++...+..++++++.
T Consensus 63 D~~----------~~v~~~~~~~-~~~~T~~~~~~~~~g~~~~~~e~~i~~~--~ga~~~l~~~di~~~~~~~~~~~~l~ 129 (335)
T PLN02630 63 DFL----------YQVSHPPIVI-PDSKTTEFHADFDQGIDGNGHEDRVLKR--VCACDPIEPSDIPDMRYEFGMAVGVA 129 (335)
T ss_pred Ccc----------ccccccceec-CCCCceEEEEEEcCCcccCCCCeEEEEe--ccccCCCChHHCCHHHhcccceeeec
Confidence 952 3777655544 67789999998876 567777765 67777888888876567777777664
Q ss_pred cccccCchhHHHHHHHHHHHhh-----CCCeEEEeCCCC-CCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC
Q 015777 213 SISLITEPCKSAHIAAAKAAKD-----AGVVLSYDPNLR-LPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP 286 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~-----~g~~v~~D~~~~-~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~ 286 (400)
+. .+.++..++++.++. +|+.+++|+++. ...|...+ ..+.++++++|++++|++|++.+
T Consensus 130 ~e-----i~~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~~---~~~~~~L~~iDil~~ne~Ea~~l------ 195 (335)
T PLN02630 130 GE-----ILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEE---TGFYDMLPRIGFLKASSEEALFI------ 195 (335)
T ss_pred CC-----CcHHHHHHHHHHhhhheeccCceEEecCCcccccccchhhH---HHHHHHHHhCCEEEecHHHHhhc------
Confidence 32 335678888888887 799999999863 44442111 23567889999999999999876
Q ss_pred cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHH
Q 015777 287 YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 366 (400)
Q Consensus 287 ~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~ 366 (400)
+.++. .+ ...|+||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|++
T Consensus 196 ~~~~~----~~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vDttGAGDaF~agfi~~l~~g~~-------~~~a~~ 262 (335)
T PLN02630 196 DVEEV----RQ--KCCVIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-------VPDAAL 262 (335)
T ss_pred CHHHH----cc--CCEEEEEECCCceEEEECCeeEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 11222 12 248999999999999998888899999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 367 FANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 367 ~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+++|++++++.|. .-.+++++++.++++
T Consensus 263 ~A~a~aa~~v~~~G~--~~~~~~~l~~~~~~i 292 (335)
T PLN02630 263 LGNYFGSLAVEQVGI--PKFDLRQLQRVKDEV 292 (335)
T ss_pred HHHHHHHHHhCcCCC--CCCCHHHHHHHhhcE
Confidence 999999999999995 335899999998775
|
|
| >COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=279.80 Aligned_cols=285 Identities=25% Similarity=0.328 Sum_probs=233.9
Q ss_pred cceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHH
Q 015777 68 EMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYML 144 (400)
Q Consensus 68 ~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i 144 (400)
+..+|+...++..... +.......+||+|.|+|..|++||.++..+|+ +|.+ .|+++
T Consensus 8 NPaiD~~~~l~~l~~g~vNr~~~~~~~aGGKGINVa~vL~~lG~~~~a~Gf-------------------lGg~-tg~~~ 67 (310)
T COG1105 8 NPALDYTVFLDELELGEVNRVRAVTKTAGGKGINVARVLKDLGIPVTALGF-------------------LGGF-TGEFF 67 (310)
T ss_pred ChhHhheeecccccccceeeeccceecCCCCceeHHHHHHHcCCCceEEEe-------------------cCCc-cHHHH
Confidence 4567777666544332 45567889999999999999999999999999 9995 89999
Q ss_pred HHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEccccccC
Q 015777 145 ADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLIT 218 (400)
Q Consensus 145 ~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~~~~~~ 218 (400)
.+.|++.||..+++++..++|+++.+.. +.+|+.+-+.. ++. .+++++++. ..+++.|+++++| ++..
T Consensus 68 ~~~l~~~gi~~~fv~v~g~TRinvki~~-~~~~~~Tein~--~Gp--~is~~~~~~~l~~~~~~l~~~d~VvlsG-SlP~ 141 (310)
T COG1105 68 VALLKDEGIPDAFVEVKGDTRINVKILD-EEDGEETEINF--PGP--EISEAELEQFLEQLKALLESDDIVVLSG-SLPP 141 (310)
T ss_pred HHHHHhcCCCceEEEccCCCeeeEEEEe-cCCCcEEEecC--CCC--CCCHHHHHHHHHHHHHhcccCCEEEEeC-CCCC
Confidence 9999999999999998877777666553 12444555543 332 356555542 3477889887755 3334
Q ss_pred chhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHHH
Q 015777 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKL 295 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l 295 (400)
..+.+.+.++++.++++|+++++|.. .+.+.+.++. .++++|||.+|++.++|.+..+. .+.++++
T Consensus 142 g~~~d~y~~li~~~~~~g~~vilD~S--------g~~L~~~L~~---~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l 210 (310)
T COG1105 142 GVPPDAYAELIRILRQQGAKVILDTS--------GEALLAALEA---KPWLIKPNREELEALFGRELTTLEDVIKAAREL 210 (310)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEECC--------hHHHHHHHcc---CCcEEecCHHHHHHHhCCCCCChHHHHHHHHHH
Confidence 45578899999999999999999974 5555555443 59999999999999999987744 3455678
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
+..|+++|+|++|.+|+++.+++..+++.++++++++|+||||+|+|||+++++++++ +++++++|+++|+.+
T Consensus 211 ~~~g~~~ViVSlG~~Gal~~~~~~~~~a~~p~~~vvstVGAGDs~VAGf~~~~~~~~~-------~e~~l~~avA~g~a~ 283 (310)
T COG1105 211 LAEGIENVIVSLGADGALLVTAEGVYFASPPKVQVVSTVGAGDSMVAGFLAGLLKGKS-------LEEALRFAVACGAAA 283 (310)
T ss_pred HHCCCCEEEEEecCcccEEEccCCeEEEeCCCcceecCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999989999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++.+. +++++++++++++++
T Consensus 284 ~~~~~~--~~~~~~~~~~~~~~v 304 (310)
T COG1105 284 ASQKGT--GIPDLDQLKKIYAQV 304 (310)
T ss_pred hhcCCC--CCCCHHHHHHHhhhe
Confidence 999996 679999999988875
|
|
| >cd01937 ribokinase_group_D Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=280.27 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=201.4
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+++|++++|++...+ .....+||++.|+|++|++||.++.++|. +|+|.+|
T Consensus 1 ~il~iG~~~iD~~~~~~--------~~~~~~GG~~~Nva~~la~lG~~~~~i~~-------------------vG~D~~g 53 (254)
T cd01937 1 KIVIIGHVTIDEIVTNG--------SGVVKPGGPATYASLTLSRLGLTVKLVTK-------------------VGRDYPD 53 (254)
T ss_pred CeEEEcceeEEEEecCC--------ceEEecCchhhhHHHHHHHhCCCeEEEEe-------------------eCCCchH
Confidence 58999999999998642 34688999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchh
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~ 221 (400)
+ ++.|+++||++.. . ...+|+.+++.++.+|++.+.++.+. ....... ...+.++|++|+++++
T Consensus 54 ~--~~~l~~~gv~~~~--~-~~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~------ 117 (254)
T cd01937 54 K--WSDLFDNGIEVIS--L-LSTETTTFELNYTNEGRTRTLLAKCA--AIPDTES---PLSTITAEIVILGPVP------ 117 (254)
T ss_pred H--HHHHHHCCcEEEE--e-cCCCeEEEEEEecCCCCeeeeecccc--CCccccc---ccccCcccEEEECCCc------
Confidence 9 6889999999642 2 33367777777777788888776432 2122111 2456789999998752
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+....+.+.+ .++++|++.....|... +..+.++++++|++++|++|++.+ .+.++.++.+.+.|++
T Consensus 118 ~~~~~~~~~~~----~~v~~D~~~~~~~~~~~---~~~~~~~l~~~di~~~n~~E~~~~-----~~~~~~~~~l~~~g~~ 185 (254)
T cd01937 118 EEISPSLFRKF----AFISLDAQGFLRRANQE---KLIKCVILKLHDVLKLSRVEAEVI-----STPTELARLIKETGVK 185 (254)
T ss_pred chhcHHHHhhh----hheeEccccceeecccc---chHHHhhcccCcEEEEcHHHHhhc-----CCHHHHHHHHHHcCCC
Confidence 22333333322 78999998643323221 122567899999999999999883 2345677788889999
Q ss_pred EEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 302 ~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|+||+|.+|+.++++++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++|+++|+
T Consensus 186 ~vvvt~g~~g~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~ 254 (254)
T cd01937 186 EIIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLAAFLYSRLSGKD-------IKEAAEFAAAAAAKFIE 254 (254)
T ss_pred EEEEeeCCcceEEEECCccEEccccCceeccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhC
Confidence 9999999999999999888899999999999999999999999999999999 99999999999999874
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >cd01946 ribokinase_group_C Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=281.00 Aligned_cols=273 Identities=19% Similarity=0.250 Sum_probs=208.3
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
.|+|+|++++|++.... . .....+||++.|+|.+++||| ++.+++. +|+| +|
T Consensus 1 ~v~~~G~~~~D~~~~~~------~-~~~~~~GG~a~N~a~~la~lg-~v~~i~~-------------------vG~D-~g 52 (277)
T cd01946 1 SLLVVGSVAFDAIETPF------G-KVDKALGGSATYFSLSASYFT-DVRLVGV-------------------VGED-FP 52 (277)
T ss_pred CeEEEEEeeeeeecCCC------c-eeeeccCchHHHHHHHHHHhc-cceeEEe-------------------ccCc-Ch
Confidence 38999999999994321 1 245779999999999999998 6999999 9999 89
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEc--CCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLR--SDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~--~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+.+++.|+++||+++++++.++.+|........ .++++..... ......+.+ .+ .+.+++++++|++++.
T Consensus 53 ~~~~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~-~~~~~~~~~v~~~~~~---- 124 (277)
T cd01946 53 EEDYKLLNSHNIVTLGLLSKEDGKTFHWAGRYHYDLNEADTLDTD--LNVFADFDP-QL-PEHYKDSEFVFLGNIA---- 124 (277)
T ss_pred HHHHHHHHhccCcceeEEEecCCCeEEEeeEehhhcccccchhhh--hhHHhhcCC-CC-hHHhhcCCEEEECCCC----
Confidence 999999999999999998877666622111100 0122222111 111111211 12 2557889999998653
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g 299 (400)
.+...++++.+++. .++++|+. ..|. ....+.++++++++|++++|++|++.+++.. +..+.++.+.+.|
T Consensus 125 --~~~~~~~~~~~~~~-~~v~~D~~---~~~~--~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~--~~~~~~~~l~~~g 194 (277)
T cd01946 125 --PELQREVLEQVKDP-KLVVMDTM---NFWI--SIKPEKLKKVLAKVDVVIINDGEARQLTGAA--NLVKAARLILAMG 194 (277)
T ss_pred --HHHHHHHHHHHHhC-CEEEEccH---HHhh--hhhHHHHHHHhccCCEEeCCHHHHHHHhCCc--hHHHHHHHHHHcC
Confidence 34566778878777 88999983 2342 1234567778999999999999999999854 2356677888899
Q ss_pred CcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++.|++|+|.+|++++.+++.+++|+++++ ++|||||||+|.|||+++|++|++. .+.++++|+++|+++|+++|++
T Consensus 195 ~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vDttGAGDaF~Agfl~~l~~~~~~--~~~~~~~a~~~a~~~aa~~~~~ 272 (277)
T cd01946 195 PKALIIKRGEYGALLFTDDGYFAAPAYPLESVFDPTGAGDTFAGGFIGYLASQKDT--SEANMRRAIIYGSAMASFCVED 272 (277)
T ss_pred CCEEEEecCCCcEEEEECCceEEcCCcccCccCCCCCchHHHHHHHHHHHHhCCCc--chhhHHHHHHHhHHHHhhhhhh
Confidence 999999999999999998888899998885 8999999999999999999998541 2445999999999999999999
Q ss_pred cCCC
Q 015777 379 RGAI 382 (400)
Q Consensus 379 ~G~~ 382 (400)
.|+.
T Consensus 273 ~G~~ 276 (277)
T cd01946 273 FGTK 276 (277)
T ss_pred cCCC
Confidence 9964
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.4e-31 Score=244.35 Aligned_cols=288 Identities=25% Similarity=0.314 Sum_probs=231.1
Q ss_pred cEEEEccceeecccCcCCCCcc------------------------CCCCceecCCChHHHHHHHHHHcCC---Cceeee
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA------------------------ESPAFKKAPGGAPANVAVGIARLGG---SSAFIG 114 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~------------------------~~~~~~~~~GG~~~N~A~~larLG~---~~~~i~ 114 (400)
-.+.+|+.++|+...++...+. +....+..+||+.-|.++.+++++- .+.++|
T Consensus 8 il~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~p~~~~f~G 87 (343)
T KOG2854|consen 8 ILVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQPGATVFFG 87 (343)
T ss_pred eeeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccCCCceEEEe
Confidence 4677999999999888733211 2346788999999999999999987 799999
Q ss_pred cccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCC
Q 015777 115 KTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQ 194 (400)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~ 194 (400)
. ||+|.+|+++.+.+++.||+..+- ..++.+|++|.++++.++ |++.-+ .++...++
T Consensus 88 s-------------------vG~Dk~ge~l~~~~~~aGv~~~yq-~~~d~~TGtCavli~~~n-RSL~an--LgAAn~f~ 144 (343)
T KOG2854|consen 88 S-------------------VGKDKFGELLKSKARAAGVNVHYQ-VKEDGPTGTCAVLITGDN-RSLCAN--LGAANCFK 144 (343)
T ss_pred e-------------------ccCchHHHHHHHHHHhcCceEEEE-eccCCCCceEEEEEeCCC-cchhhc--cchhhccC
Confidence 9 999999999999999999999865 567779999999998777 776654 56666777
Q ss_pred ccccc----hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 195 EAELD----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 195 ~~~l~----~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
.++++ +..++++.+++++++.+. .+++++..+.+.+.+.+.+..++.+-.. ......+.+.++++++|++
T Consensus 145 ~dhl~~~~~~~lveka~v~yv~Gfflt--v~p~ai~~v~qh~~e~~r~~~lnlsapf----I~q~~~~~l~~v~~y~Dii 218 (343)
T KOG2854|consen 145 VDHLDKEENWALVEKAKVFYVAGFFLT--VSPDAIRKVAQHAAENNRVFTLNLSAPF----ISQFFKDALDKVLPYADII 218 (343)
T ss_pred HHHhcchhhhhhhhheeEEEEEEEEEE--eChHHHHHHHHHHHHhcchhheeccchh----HHHHHHHHHHhhcCcceEE
Confidence 77774 357899999999998653 3467888888889888887777664321 2456678888899999999
Q ss_pred EcCHhHHhcccCCCC---CcHHHHHHHHH------hCCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCCCCchH
Q 015777 271 KISEEEISFLTQGED---PYDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGD 338 (400)
Q Consensus 271 ~~N~~E~~~l~~~~~---~~~~~~~~~l~------~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDttGAGD 338 (400)
+.|++|++.+..... .+..+....+. ....+.++||.|.+++++...++...+|..+. +++||+||||
T Consensus 219 fgNe~EA~af~~~~~~~t~dv~eia~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGD 298 (343)
T KOG2854|consen 219 FGNEDEAAAFARAHGWETKDVKEIALKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGD 298 (343)
T ss_pred EcCHHHHHHHHHhhCCcccchHHHhhHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchH
Confidence 999999999976542 22222222221 23578899999999999999887766665544 6999999999
Q ss_pred HHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 015777 339 AFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 387 (400)
Q Consensus 339 aF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~ 387 (400)
+|++||+++|.+|.+ +++|++.|+.+|+..+...|. .+|+
T Consensus 299 aFvgGFl~~l~qg~~-------l~~cir~g~~aa~~vi~~~G~--~~p~ 338 (343)
T KOG2854|consen 299 AFVGGFLSQLVQGKS-------LEECIRAGSYAASHVIRRVGC--TVPE 338 (343)
T ss_pred HHHHHHHHHHHcCCC-------HHHHHHHHHHHhhheeeccCC--CCCC
Confidence 999999999999999 999999999999999999996 3454
|
|
| >COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-30 Score=242.57 Aligned_cols=289 Identities=22% Similarity=0.252 Sum_probs=228.6
Q ss_pred CCCcEEEEccceeecccCcCC------CCc--cCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG------LSL--AESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL 130 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~------~~~--~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~ 130 (400)
.+.+|+|+|+.++|.+...+- .|. ........++||+ +|+|.+++.||.++.++|.
T Consensus 9 ~~~kVLVvGDvmLDrY~~G~~~RISPEAPVPVv~v~~e~~rlGGA-aNVa~NiasLGa~a~l~Gv--------------- 72 (467)
T COG2870 9 KQAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEKEEERLGGA-ANVAKNIASLGANAYLVGV--------------- 72 (467)
T ss_pred cCCcEEEEcceeeeeeccccccccCCCCCCceEEecccccccccH-HHHHHHHHHcCCCEEEEEe---------------
Confidence 456899999999999876542 222 2566778899996 7999999999999999999
Q ss_pred CCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc---hhhcCCcc
Q 015777 131 PCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD---LSLITKAK 207 (400)
Q Consensus 131 ~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~---~~~i~~~~ 207 (400)
+|+|+.|+.+.+.|+..+|+.. +..+++.+|.....++..+.+-.-+.+.. ... ......+- .+.+++.|
T Consensus 73 ----vG~Deag~~L~~~l~~~~i~~~-l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee-~~~-~~~~~~ll~~~~~~l~~~~ 145 (467)
T COG2870 73 ----VGKDEAGKALIELLKANGIDSD-LLRDKNRPTIVKLRVLSRNQQLLRLDFEE-KFP-IEDENKLLEKIKNALKSFD 145 (467)
T ss_pred ----eccchhHHHHHHHHHhcCcccc-eEeecCCCceeeeeeecccceEEEecccc-cCc-chhHHHHHHHHHHHhhcCC
Confidence 9999999999999999999955 55678889988888876544332222211 111 11111111 25678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc
Q 015777 208 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287 (400)
Q Consensus 208 ~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~ 287 (400)
+++++.|.-..-. ....+++.|++.|++|.+||.+.. .+.+..+..++||..|++...|....+
T Consensus 146 ~vVLSDY~KG~L~---~~q~~I~~ar~~~~pVLvDPKg~D-------------f~~Y~GAtLiTPN~~E~~~~vg~~~~e 209 (467)
T COG2870 146 ALVLSDYAKGVLT---NVQKMIDLAREAGIPVLVDPKGKD-------------FEKYRGATLITPNLKEFEEAVGKCKSE 209 (467)
T ss_pred EEEEeccccccch---hHHHHHHHHHHcCCcEEECCCCcc-------------hhhhCCCeecCCCHHHHHHHHcccccH
Confidence 9999988754322 256788899999999999996421 124568999999999999999988764
Q ss_pred HH--HHHHHHH-hCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 288 DD--AVVYKLF-HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 288 ~~--~~~~~l~-~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
.+ +..++|. +.+...++||++++|..++..++..|+|+...++.|.|||||+-+|.|..+++.|.+ +++|
T Consensus 210 ~el~~~g~kL~~~~~L~alLvTRsE~GMtL~~~~~~~h~pt~AkEVyDVTGAGDTVIa~la~~laaG~s-------~~eA 282 (467)
T COG2870 210 EELEERGQKLKEELDLSALLVTRSEKGMTLFQEGKPLHFPARAKEVYDVTGAGDTVIAVLAAALAAGAS-------LEEA 282 (467)
T ss_pred HHHHHHHHHHHHhhCcceEEEEeccCCceeecCCcccccchhheeeeeccCCCchHHHHHHHHHHcCCC-------HHHH
Confidence 31 2234444 468899999999999999998888999999889999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
+.+||++|++.+...|+. ..+.+||.+.+
T Consensus 283 c~lAN~AagiVVgKlGTa--tvs~~EL~nAV 311 (467)
T COG2870 283 CELANAAAGIVVGKLGTA--TVSPEELEMAV 311 (467)
T ss_pred HHHhhhhcceEEeeccce--eecHHHHHhhh
Confidence 999999999999999984 47889888743
|
|
| >KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=218.24 Aligned_cols=281 Identities=18% Similarity=0.264 Sum_probs=217.2
Q ss_pred CCCCcEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
.+++.|+|+|.+.+|++..++..|.+. ..+-.++.||.+.|++.+|++||.++.|+|.
T Consensus 2 ~~~k~VLcVG~~~lD~iTivd~~~fe~~~~r~~~g~wqRgG~asNvcTvlrlLG~~cef~Gv------------------ 63 (308)
T KOG2947|consen 2 EEPKQVLCVGCTVLDVITIVDKYPFEDSEIRCLSGRWQRGGNASNVCTVLRLLGAPCEFFGV------------------ 63 (308)
T ss_pred CCcceEEEeccEEEEEEEeccCCCCCccceehhhhhhhcCCCcchHHHHHHHhCCchheeee------------------
Confidence 445689999999999999999888763 4556789999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS 213 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~ 213 (400)
+.....-+++++.|++.|||++++......+.-..+|.-...|.|+++++ .......+.+++..-.+.+..|+|+..
T Consensus 64 -lsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~--dks~p~vT~~dF~kvdl~qy~WihfE~ 140 (308)
T KOG2947|consen 64 -LSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYC--DKSLPDVTATDFEKVDLTQYGWIHFEA 140 (308)
T ss_pred -cccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEe--cCCCccccHHHhhhcccceeeeEEEec
Confidence 99888889999999999999999998877555555555557789999987 445566788888766788999999987
Q ss_pred ccccCchhHHHHHHHHHHHh----hCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHH
Q 015777 214 ISLITEPCKSAHIAAAKAAK----DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~----~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~ 289 (400)
..... ..+.+..+.+.=. +.+|.+++|.- ..++...++...+|+++.+++-++.+.-... .
T Consensus 141 Rnp~e--tlkM~~~I~~~N~r~pe~qrI~vSvd~e----------n~req~~~l~am~DyVf~sK~~a~~~gfks~---r 205 (308)
T KOG2947|consen 141 RNPSE--TLKMLQRIDAHNTRQPEEQRIRVSVDVE----------NPREQLFQLFAMCDYVFVSKDVAKHLGFKSP---R 205 (308)
T ss_pred CChHH--HHHHHHHHHHhhcCCCccceEEEEEEec----------CcHHHHHHHhhcccEEEEEHHHHhhhccCCH---H
Confidence 53211 1122222222111 13577888863 2356667788999999999999887755443 3
Q ss_pred HHHHHHHhC-----CCcEEEEEecCCcEEEEeC-CceEEEccccc-cccCCCCchHHHHHHHHHHHH-cCCccccchHHH
Q 015777 290 AVVYKLFHA-----NLKLLLVTEGPDGCRYYTK-DFSGRVQGLKV-EAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQL 361 (400)
Q Consensus 290 ~~~~~l~~~-----g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~-~g~~~~~~~~~l 361 (400)
++...+..+ ....+|+-++++|+-.... |+.+++++.+- ++||+.|+||+|.|||+|+++ ++.+ +
T Consensus 206 ea~~~l~~r~~~~~pkpv~I~~w~~eGA~~l~adg~yfev~a~~ppkvVD~lg~~DtF~A~vIyA~lk~~r~-------l 278 (308)
T KOG2947|consen 206 EACEGLYGRVPKGKPKPVLICPWASEGAGALGADGKYFEVDAFKPPKVVDTLGAGDTFNAGVIYALLKQGRS-------L 278 (308)
T ss_pred HHHHHHHhhcccCCCCcEEEeccccccccccCCCCCEEecCCCCCccceeeccCCCcchHHHHHHHHHhhhh-------H
Confidence 444444322 2356788899999877764 46778888865 899999999999999999955 5677 9
Q ss_pred HHHHHHHHHHHHHHhcccCC
Q 015777 362 RDALRFANACGALTVMERGA 381 (400)
Q Consensus 362 ~~al~~A~a~Aa~~v~~~G~ 381 (400)
.||++||+++|+.++...|-
T Consensus 279 ~eAvdfg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 279 AEAVDFGNRVASKKLGGQGF 298 (308)
T ss_pred HHHHHHHHHhhhcccccccc
Confidence 99999999999999999884
|
|
| >cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=213.54 Aligned_cols=188 Identities=31% Similarity=0.407 Sum_probs=157.1
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++|++++|.+..+++.|.. +.......+||.+.|+|.+|++||.++.++ |
T Consensus 1 ~v~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~LG~~~~~~----------------------~- 57 (196)
T cd00287 1 RVLVVGSLLVDVILRVDALPLPGGLVRPGDTEERAGGGAANVAVALARLGVSVTLV----------------------G- 57 (196)
T ss_pred CEEEEccceEEEEEEeccCCCCCCeEEeceeeecCCCcHHHHHHHHHHCCCcEEEE----------------------E-
Confidence 4899999999999999887765 355678899999999999999999988874 3
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
+|++|+++....
T Consensus 58 --------------------------------------------------------------------~~~v~i~~~~~~ 69 (196)
T cd00287 58 --------------------------------------------------------------------ADAVVISGLSPA 69 (196)
T ss_pred --------------------------------------------------------------------ccEEEEecccCc
Confidence 788888775422
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYK 294 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~ 294 (400)
.+...++++.+++.|+++++|++.+...|.. ..+.++++++|++++|++|++.+++....+. .+.++.
T Consensus 70 ----~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~-----~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~ 140 (196)
T cd00287 70 ----PEAVLDALEEARRRGVPVVLDPGPRAVRLDG-----EELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAAL 140 (196)
T ss_pred ----HHHHHHHHHHHHHcCCeEEEeCCcccccccc-----chHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHH
Confidence 3567788889999999999999876554432 1156678899999999999999999765542 245677
Q ss_pred HHhCCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
+.+.+++.+++|+|++|+++++ +++.+++|+++++++||+||||+|+|||+++++
T Consensus 141 l~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 141 LLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPVKVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred HHhcCCCEEEEEECCCccEEEecCCceEEcCCccCCcccCCCchHHHHHHHHHHhC
Confidence 8889999999999999999999 777888998888999999999999999999874
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). |
| >PRK12413 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=164.57 Aligned_cols=150 Identities=17% Similarity=0.152 Sum_probs=118.9
Q ss_pred HHHHHHHHHHh-hCCCeEEEeCCCCCCCCC--ChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHHHH
Q 015777 223 SAHIAAAKAAK-DAGVVLSYDPNLRLPLWP--SADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLF 296 (400)
Q Consensus 223 ~~~~~~~~~a~-~~g~~v~~D~~~~~~~~~--~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~ 296 (400)
+....+++.++ +.++++++||+.+...|. ..+.+.+.++++++++|++++|++|++.|+|.+..+. .+.++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g~~~~~~~~~~~~a~~l~ 162 (253)
T PRK12413 83 EIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSGKEIKTLEDMKEAAKKLY 162 (253)
T ss_pred HHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhCcCCCCHHHHHHHHHHHH
Confidence 34455555555 468999999999988883 4556667777789999999999999999999765433 35567888
Q ss_pred hCCCcEEEEEecCCcE-----EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGC-----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~-----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.|++.|+||.|++|+ .++..++..+++..++..+|++||||+|.|+|+++|++|++ +++|+++|.++
T Consensus 163 ~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGDaf~a~~~~~l~~g~~-------l~ea~~~A~~~ 235 (253)
T PRK12413 163 DLGAKAVVIKGGNRLSQKKAIDLFYDGKEFVILESPVLEKNNIGAGCTFASSIASQLVKGKS-------PLEAVKNSKDF 235 (253)
T ss_pred HcCCCEEEEeCCCCCCCCcceEEEEcCCEEEEEeecccCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 8999999999998742 23334444556667778899999999999999999999999 99999999998
Q ss_pred HHHHhccc
Q 015777 372 GALTVMER 379 (400)
Q Consensus 372 Aa~~v~~~ 379 (400)
....+...
T Consensus 236 ~~~~l~~~ 243 (253)
T PRK12413 236 VYQAIQQS 243 (253)
T ss_pred HHHHHHHH
Confidence 88777653
|
|
| >cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=163.45 Aligned_cols=165 Identities=22% Similarity=0.107 Sum_probs=128.7
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhC--CCeEEEeCCCCC--CCCCChHHHHHhHHhhhc-cCcEEEcCHhHHh
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDA--GVVLSYDPNLRL--PLWPSADKAREGILSIWE-TADIIKISEEEIS 278 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~--~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~ 278 (400)
...+.+..+.+ ......+.+.++++.++++ ++++++||+.+. .+|...+...+.+.+++. ++|++++|.+|++
T Consensus 71 ~~~~~v~~G~l--~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~ 148 (254)
T cd01173 71 LEYDAVLTGYL--GSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELE 148 (254)
T ss_pred ccCCEEEEecC--CCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHH
Confidence 45677765543 2344567788888888877 899999997533 444333455666777666 9999999999999
Q ss_pred cccCCCCCcH---HHHHHHHHhCCCcEEEEEecCC------cEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHH
Q 015777 279 FLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD------GCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQL 348 (400)
Q Consensus 279 ~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~------G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l 348 (400)
.|+|.+..+. .+.++++.++|++.|+||.|.. |++++.+++.++++.++++ ++|++||||+|.|+|+++|
T Consensus 149 ~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~~~~~l 228 (254)
T cd01173 149 LLTGKKINDLEDAKAAARALHAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARL 228 (254)
T ss_pred HHcCCCcCCHHHHHHHHHHHHHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeeccCCCCCcCChHHHHHHHHHHHH
Confidence 9999765432 4566788889999999999985 7888877665555555555 7999999999999999999
Q ss_pred HcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 349 STDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 349 ~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
++|++ +++|+++|++.....+.
T Consensus 229 ~~g~~-------~~~a~~~A~~~~~~~i~ 250 (254)
T cd01173 229 LKGKS-------LAEALEKALNFVHEVLE 250 (254)
T ss_pred HcCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999 99999999998776664
|
Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria. |
| >PRK05756 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.3e-18 Score=162.05 Aligned_cols=167 Identities=21% Similarity=0.114 Sum_probs=129.2
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCCCCC---CCCChHHHHHhHHhhhccCcEEEcCHhHH
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEI 277 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~~~ll~~~dvl~~N~~E~ 277 (400)
+...+.+..|.+ ......+.+.++++.+++.+ +.+++||+.+.. .|...+......+.+++++|++++|..|+
T Consensus 72 l~~~~~v~~G~l--~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea 149 (286)
T PRK05756 72 LGECDAVLSGYL--GSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFEL 149 (286)
T ss_pred cccCCEEEECCC--CCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHH
Confidence 457787766543 34445667788888887765 568999987652 33333333334445889999999999999
Q ss_pred hcccCCCCCcH---HHHHHHHHhCCCcEEEEEecCC--------cEEEEeCCceEEEccccccc-cCCCCchHHHHHHHH
Q 015777 278 SFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD--------GCRYYTKDFSGRVQGLKVEA-VDATGAGDAFVAGIL 345 (400)
Q Consensus 278 ~~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~--------G~~~~~~~~~~~vpa~~v~v-vDttGAGDaF~Agfl 345 (400)
+.|+|....+. .+.++++++.|++.|+||.|.. |++++++++.++++.++++. +|++||||+|.|+|+
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~GaGD~f~a~~~ 229 (286)
T PRK05756 150 EWLSGRPVETLEDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFL 229 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCccCCCCCCCChHHHHHHHHH
Confidence 99999764433 3455678888999999999876 57777777777777777777 799999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+++++|++ +++|+++|++.....+..
T Consensus 230 a~l~~g~~-------~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 230 ARLLQGGS-------LEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999998887765
|
|
| >PRK12412 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=158.08 Aligned_cols=161 Identities=13% Similarity=0.084 Sum_probs=124.5
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCe-EEEeCCCCCCCC---CChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRLPLW---PSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~~~---~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
.+.+.++-+ .+.+.+..+.+.+++.+.+ +++||....... ...+......+++++++|+++||+.|++.|+
T Consensus 73 ~~~ikiG~l-----~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~ 147 (268)
T PRK12412 73 VDALKTGML-----GSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLS 147 (268)
T ss_pred CCEEEECCC-----CCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHh
Confidence 788887754 2356777788888888876 999997533211 0112222334458899999999999999999
Q ss_pred CCCCCc---HHHHHHHHHhCCCcEEEEEecCCcE------EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 282 QGEDPY---DDAVVYKLFHANLKLLLVTEGPDGC------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 282 ~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~G~------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
|....+ ..+++++++++|++.|+||.|++|+ +++.++..++++.++++.+|++||||+|.|+|+++|++|+
T Consensus 148 g~~~~~~~~~~~aa~~l~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~t~GaGD~f~aa~aa~l~~g~ 227 (268)
T PRK12412 148 GVKINSLEDMKEAAKKIHALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKIDTTNTHGAGCTYSAAITAELAKGK 227 (268)
T ss_pred CcCCCCHHHHHHHHHHHHhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCccCCCCCCchHHHHHHHHHHHHHCCC
Confidence 975443 2355678888999999999999764 3455555567888889999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+ +++|+++|.++....+..
T Consensus 228 ~-------l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 228 P-------VKEAVKTAKEFITAAIRY 246 (268)
T ss_pred C-------HHHHHHHHHHHHHHHHHH
Confidence 9 999999999999887775
|
|
| >TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=155.80 Aligned_cols=161 Identities=17% Similarity=0.150 Sum_probs=126.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCC-eEEEeCCCCCC----CCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLP----LWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~----~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.+|-+ .+.+.+..+++.+++.+. ++++||..+.. ++ +.+......+++++++|++++|..|++.
T Consensus 67 ~~~aikiG~l-----~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~ 140 (254)
T TIGR00097 67 PVDAAKTGML-----ASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLL-EEEAIEALRKRLLPLATLITPNLPEAEA 140 (254)
T ss_pred CCCEEEECCc-----CCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCC-CHHHHHHHHHhccccccEecCCHHHHHH
Confidence 4577777643 234677788888888888 69999975432 22 2222223334578999999999999999
Q ss_pred ccCCCCCcH---HHHHHHHHhCCCcEEEEEecC----CcE-EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC
Q 015777 280 LTQGEDPYD---DAVVYKLFHANLKLLLVTEGP----DGC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351 (400)
Q Consensus 280 l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~----~G~-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g 351 (400)
|++....+. .+.++.+.+.|++.|+||.|+ +|. +++.+++.++++.++++.+|++||||+|.|+|+++|++|
T Consensus 141 L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~aalaa~la~g 220 (254)
T TIGR00097 141 LLGTKIRTEQDMIKAAKKLRELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRIETKNTHGTGCTLSAAIAANLAKG 220 (254)
T ss_pred HhCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEecccCCCCCCChHHHHHHHHHHHHHCC
Confidence 999754332 355678888999999999997 344 556777677888888999999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 352 FSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 352 ~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++ +++|+++|++++...+..
T Consensus 221 ~~-------l~eA~~~A~~~~~~~i~~ 240 (254)
T TIGR00097 221 LS-------LKEAVKEAKEFVTGAIRY 240 (254)
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999999998875
|
This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. |
| >TIGR00687 pyridox_kin pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=159.44 Aligned_cols=161 Identities=19% Similarity=0.175 Sum_probs=122.0
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCCCCC---CCCChHHHHHhH-HhhhccCcEEEcCHh
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLP---LWPSADKAREGI-LSIWETADIIKISEE 275 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~-~~ll~~~dvl~~N~~ 275 (400)
.+.++|+++.|.+. .....+.+.++++.+++.+ +.+++||..+.. .|.. +.+.+.+ .++++++|++++|..
T Consensus 71 ~~~~~d~v~~G~l~--~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~-~~~~~~~~~~ll~~adii~pN~~ 147 (286)
T TIGR00687 71 KLNQCDAVLSGYLG--SAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVA-PDLLEVYREKAIPVADIITPNQF 147 (286)
T ss_pred ccccCCEEEECCCC--CHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeC-hhHHHHHHHhccccccEecCCHH
Confidence 34588988766543 3334567778888888765 678999965432 2222 3344444 358899999999999
Q ss_pred HHhcccCCCCCcHH---HHHHHHHhCCCcEEEEE-ecCCcE--------EEEeCCceEEEcccccc-ccCCCCchHHHHH
Q 015777 276 EISFLTQGEDPYDD---AVVYKLFHANLKLLLVT-EGPDGC--------RYYTKDFSGRVQGLKVE-AVDATGAGDAFVA 342 (400)
Q Consensus 276 E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvT-~G~~G~--------~~~~~~~~~~vpa~~v~-vvDttGAGDaF~A 342 (400)
|++.|+|.+..+.+ ++++.+++.|++.|+|| .|.+|+ +++.+++.++.+.++++ ++|++||||+|+|
T Consensus 148 Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~A 227 (286)
T TIGR00687 148 ELELLTGRKINTVEEALAAADALIAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLAVFMRQPVGTGDLIAA 227 (286)
T ss_pred HHHHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCcCCCCCCCChHHHHHH
Confidence 99999997654333 44677888899999999 688875 44555666677766777 6999999999999
Q ss_pred HHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 343 GILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 343 gfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
+|++++++|++ +++|+++|+++.
T Consensus 228 ~~l~~l~~g~~-------~~~al~~A~~~v 250 (286)
T TIGR00687 228 LLLATLLHGNS-------LKEALEKTVSAV 250 (286)
T ss_pred HHHHHHhcCCC-------HHHHHHHHHHHH
Confidence 99999999999 999999999993
|
ThiD and related proteins form an outgroup. |
| >cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-17 Score=152.53 Aligned_cols=161 Identities=18% Similarity=0.149 Sum_probs=124.6
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhC-CCeEEEeCCCCCCCCC---ChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWP---SADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~~~~---~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+.+|-+. +.+....+.+.+++. ++++++||+.+...+. +.+........+++++|++++|..|++.|
T Consensus 68 ~~~~i~~G~l~-----~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 142 (242)
T cd01169 68 PVDAIKIGMLG-----SAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELL 142 (242)
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHH
Confidence 57888876432 245666677777775 8899999986543221 12222333445679999999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEEecCCc-----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G-----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
+|....+. .+.++.+.++|++.|+||.|++| .+++.+++.++++.++++++|++|+||+|.|+|++++++|.
T Consensus 143 ~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~a~l~~g~ 222 (242)
T cd01169 143 TGLEIATEEDMMKAAKALLALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRIDTKNTHGTGCTLSSAIAANLAKGL 222 (242)
T ss_pred hCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCCceeEEEEECCcEEEEecceeCCCCCCChHHHHHHHHHHHHHCCC
Confidence 99765432 34567788899999999999985 36677777788898888899999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+ +++|+++|++.-...+.
T Consensus 223 ~-------~~~A~~~A~~~~~~~i~ 240 (242)
T cd01169 223 S-------LEEAVREAKEYVTQAIR 240 (242)
T ss_pred C-------HHHHHHHHHHHHHHHHH
Confidence 9 99999999988776654
|
The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction. |
| >PRK07105 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=159.71 Aligned_cols=165 Identities=20% Similarity=0.178 Sum_probs=124.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC--CCCCC-hHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL--PLWPS-ADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--~~~~~-~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
++|.+++|.+. .....+.+.++++.+++.++++++||+.+. .+|.. .+...+.++++++++|++++|+.|++.|+
T Consensus 75 ~~~aik~G~l~--~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~ 152 (284)
T PRK07105 75 KFDAIYSGYLG--SPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLL 152 (284)
T ss_pred ccCEEEECcCC--CHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHc
Confidence 67888877542 222344555556666667899999998543 24431 23455667789999999999999999999
Q ss_pred CCCCC----cH---HHHHHHHHhCCCcEEEEEe-----cCCcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 282 QGEDP----YD---DAVVYKLFHANLKLLLVTE-----GPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 282 ~~~~~----~~---~~~~~~l~~~g~~~vvvT~-----G~~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
|.... +. .++++++.+.|++.|+||. |..|+++++++ ..++.+.+.++ +|++||||+|.|+|+++
T Consensus 153 g~~~~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~aa~~~~ 231 (284)
T PRK07105 153 DKPYLEKSYSEEEIKQLLRKLADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYIP-AHYPGTGDIFTSVITGS 231 (284)
T ss_pred CCCcCcCCCCHHHHHHHHHHHHhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeecccC-CCcCChhHHHHHHHHHH
Confidence 97532 12 3456777888999999999 67788888753 34445544444 89999999999999999
Q ss_pred HHcCCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 348 LSTDFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 348 l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
+++|++ +++|+++|+++....+...
T Consensus 232 l~~g~~-------l~~av~~A~~~~~~~i~~~ 256 (284)
T PRK07105 232 LLQGDS-------LPIALDRAVQFIEKGIRAT 256 (284)
T ss_pred HhCCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999888754
|
|
| >PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-17 Score=155.05 Aligned_cols=161 Identities=19% Similarity=0.179 Sum_probs=125.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCC-eEEEeCCCCCC----CCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLP----LWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~----~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.++.+. +.+....+.+.+++.+. ++++||..+.. +| ..+......+++++++|+++||..|++.
T Consensus 73 ~~~ai~iG~l~-----~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~ 146 (266)
T PRK06427 73 RIDAVKIGMLA-----SAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLL-ADDAVAALRERLLPLATLITPNLPEAEA 146 (266)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCC-CHHHHHHHHHhhhCcCeEEcCCHHHHHH
Confidence 56778777532 24566677777887775 89999975432 22 2222223334588999999999999999
Q ss_pred ccCCCCCc----HHHHHHHHHhCCCcEEEEEecC--CcE----EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 280 LTQGEDPY----DDAVVYKLFHANLKLLLVTEGP--DGC----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 280 l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~--~G~----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
|+|.+..+ ..++++++.++|++.|+||.|+ +|. +++.+++.++++.++++.+|++|+||+|.|+|+++++
T Consensus 147 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~~~l~ 226 (266)
T PRK06427 147 LTGLPIADTEDEMKAAARALHALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRIPTKNTHGTGCTLSAAIAAELA 226 (266)
T ss_pred HhCCCCCCcHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeECCCCCCChHHHHHHHHHHHHH
Confidence 99975332 2356678888999999999998 554 5666666778888888899999999999999999999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 350 TDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 350 ~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|.+ +++|+++|++.+...+..
T Consensus 227 ~g~~-------l~~A~~~A~~~~~~~i~~ 248 (266)
T PRK06427 227 KGAS-------LLDAVQTAKDYVTRAIRH 248 (266)
T ss_pred CCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999988876
|
|
| >PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=152.75 Aligned_cols=165 Identities=19% Similarity=0.147 Sum_probs=121.7
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCC---CCCCChHHHHHhHH-hhhccCcEEEcCHhH
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGIL-SIWETADIIKISEEE 276 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~-~ll~~~dvl~~N~~E 276 (400)
+.++|.+++|.+. .....+.+.+.++..+. .+.++++||.... .+|.+.+. .+.++ .+++++|+++||+.|
T Consensus 86 l~~~d~i~~G~l~--s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~-~~~~~~~Ll~~advitPN~~E 162 (281)
T PRK08176 86 LRQLRAVTTGYMG--SASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDL-PEAYRQHLLPLAQGLTPNIFE 162 (281)
T ss_pred cccCCEEEECCCC--CHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccH-HHHHHHHhHhhcCEeCCCHHH
Confidence 4578999887653 33333455555554443 4788999997443 24433332 33444 588999999999999
Q ss_pred HhcccCCCCCcHH---HHHHHHHhCCCcEEEEEecCCc-------EEEEeCCceEEEccccccccCCCCchHHHHHHHHH
Q 015777 277 ISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPDG-------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 277 ~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvT~G~~G-------~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
++.|+|.+..+.+ ++++++++.|++.|+||.|+.| ++++++++.+ ....+...+|++||||+|.|+|++
T Consensus 163 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~GaGD~faa~~~a 241 (281)
T PRK08176 163 LEILTGKPCRTLDSAIAAAKSLLSDTLKWVVITSAAGNEENQEMQVVVVTADSVN-VISHPRVDTDLKGTGDLFCAELVS 241 (281)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHhcCCCEEEEeeccCCCCCCcEEEEEEeCCceE-EEecCccCCCCCChhHHHHHHHHH
Confidence 9999997644333 4567888899999999999998 5667766544 344455568999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++++|.+ +++|+++|+..-...+..
T Consensus 242 ~l~~g~~-------l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 242 GLLKGKA-------LTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999887766654
|
|
| >PRK08573 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=160.89 Aligned_cols=159 Identities=19% Similarity=0.199 Sum_probs=124.6
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
.+.+..+.+. +.+.+..+++.+++.++++++||+.+. .+|. .+.......++++++|++++|+.|++.|+
T Consensus 72 ~~~ik~G~l~-----~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~-~~~~~~l~~~llp~adli~pN~~Ea~~L~ 145 (448)
T PRK08573 72 IDAAKTGMLS-----NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLR-EDAVDALIKRLLPLATVVTPNRPEAEKLT 145 (448)
T ss_pred CCEEEECCcC-----CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCC-HHHHHHHHHhhhccCEEEcCCHHHHHHHh
Confidence 3455555422 357788889999999999999998664 3442 22223334568899999999999999999
Q ss_pred CCCCCcH---HHHHHHHHh-CCCcEEEEEecC----CcE-EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 282 QGEDPYD---DAVVYKLFH-ANLKLLLVTEGP----DGC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 282 ~~~~~~~---~~~~~~l~~-~g~~~vvvT~G~----~G~-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
|....+. .++++++.+ .|++.|+||.|. +|+ +++.+++.++++.++++++|++||||+|.|+|++++++|+
T Consensus 146 g~~i~~~~d~~~aa~~L~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v~~~dt~GAGDaFsAa~aa~l~~G~ 225 (448)
T PRK08573 146 GMKIRSVEDARKAAKYIVEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRVESGCTHGTGCSFSAAIAAGLAKGL 225 (448)
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCcCCCCCCChHHHHHHHHHHHHHcCC
Confidence 9764432 345667764 799999999985 354 4456666678888888999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+ +++|+++|+.+....++
T Consensus 226 ~-------l~eAl~~A~~~~~~al~ 243 (448)
T PRK08573 226 D-------PEEAIKTAKKFITMAIK 243 (448)
T ss_pred C-------HHHHHHHHHHHHHHHHH
Confidence 9 99999999999999888
|
|
| >PRK12616 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.8e-16 Score=145.94 Aligned_cols=162 Identities=16% Similarity=0.122 Sum_probs=122.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCCCCC---ChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLPLWP---SADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~~~~---~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+.+|-+ .+.+.+..+.+.+++.+ .++++||.....-.. ..+........+++.+|+++||..|++.|
T Consensus 74 ~~~aikiG~l-----~s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L 148 (270)
T PRK12616 74 GVDAMKTGML-----PTVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQL 148 (270)
T ss_pred CCCEEEECCC-----CCHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHH
Confidence 4577777654 23456677777777776 469999986432111 12222223334788999999999999999
Q ss_pred cCC-CCCcH---HHHHHHHHhCCCcEEEEEecCCcE------EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQG-EDPYD---DAVVYKLFHANLKLLLVTEGPDGC------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~-~~~~~---~~~~~~l~~~g~~~vvvT~G~~G~------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|. ...+. .++++++.+.|++.|+||.|.+|. +++.+++.++++.++++.+|++||||+|.|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~~aa~~l~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~fsaalaa~l~~ 228 (270)
T PRK12616 149 SGMGEIKTVEQMKEAAKKIHELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (270)
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeeeCCCCCCcHHHHHHHHHHHHHHC
Confidence 986 23322 355678888999999999998862 55666666677888888999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|.+ +++|+++|.......+..
T Consensus 229 g~~-------l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 229 GSE-------VKEAIYAAKEFITAAIKE 249 (270)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999999998877765
|
|
| >PTZ00344 pyridoxal kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-14 Score=136.37 Aligned_cols=162 Identities=18% Similarity=0.125 Sum_probs=115.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCC--CCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNL--RLPLWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~--~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+++..|.++ .....+.+.++++.+++.+ +++++||+. +..+|. .+.+.+.++++++++|++++|++|++.|
T Consensus 77 ~~~~v~sG~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~-~~~~~~~~~~ll~~~dii~pN~~E~~~L 153 (296)
T PTZ00344 77 DYTYVLTGYIN--SADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYV-KEEVVDAYRELIPYADVITPNQFEASLL 153 (296)
T ss_pred cCCEEEECCCC--CHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEe-CHHHHHHHHHHhhhCCEEeCCHHHHHHH
Confidence 45677777654 2222334445555555555 589999854 445564 4567777888999999999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEE---ecCCc----EEEEe--C----CceEEEccccccccCCCCchHHHHHHH
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVT---EGPDG----CRYYT--K----DFSGRVQGLKVEAVDATGAGDAFVAGI 344 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT---~G~~G----~~~~~--~----~~~~~vpa~~v~vvDttGAGDaF~Agf 344 (400)
+|.+..+. .+.++.+.+.|++.|+|| .|.+| +++.. . ++.+.+..++++ ++++|+||+|.|+|
T Consensus 154 ~g~~~~~~~~~~~~~~~l~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~A~~ 232 (296)
T PTZ00344 154 SGVEVKDLSDALEAIDWFHEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIE-GRYTGTGDLFAALL 232 (296)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEeccccC-CCCCCchHHHHHHH
Confidence 99764333 245677878899999999 55566 44432 1 234555555555 57799999999999
Q ss_pred HHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 345 LSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 345 l~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++.+.+| + +++|+++|.+.-...+..
T Consensus 233 ~a~l~~g-~-------~~~a~~~A~a~~~~~i~~ 258 (296)
T PTZ00344 233 LAFSHQH-P-------MDLAVGKAMGVLQDIIKA 258 (296)
T ss_pred HHHHhcC-C-------HHHHHHHHHHHHHHHHHH
Confidence 9888887 8 999999998887766654
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.2e-14 Score=143.67 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=115.6
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCC--hHHHHHhHH-hhhccCcEEEcCHhHHh
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPS--ADKAREGIL-SIWETADIIKISEEEIS 278 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~--~~~~~~~~~-~ll~~~dvl~~N~~E~~ 278 (400)
.+.+.+|.+. +.+.+..+.+.++ ++++++||..+. .++.. .+...+.++ ++++.+|+++||..|++
T Consensus 300 ~~~Ik~G~l~-----s~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~ 372 (504)
T PTZ00347 300 ISVVKLGLVP-----TARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPEAE 372 (504)
T ss_pred CCEEEECCcC-----CHHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHHHH
Confidence 4555555432 2456666666664 678999997642 22221 111122333 57899999999999999
Q ss_pred cccCCC-CCc---HHHHHHHHHhCCCcEEEEEecCCc-------EEEEeC--CceEEEccccccccCCCCchHHHHHHHH
Q 015777 279 FLTQGE-DPY---DDAVVYKLFHANLKLLLVTEGPDG-------CRYYTK--DFSGRVQGLKVEAVDATGAGDAFVAGIL 345 (400)
Q Consensus 279 ~l~~~~-~~~---~~~~~~~l~~~g~~~vvvT~G~~G-------~~~~~~--~~~~~vpa~~v~vvDttGAGDaF~Agfl 345 (400)
.|+|.. ..+ ..++++.+.+.|++.|+||.|.+| .+++.+ ++.++++.++++++|++|+||+|.|+|+
T Consensus 373 ~L~g~~~~~~~~~~~~aa~~l~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~GaGD~fsaaia 452 (504)
T PTZ00347 373 RILGRKEITGVYEARAAAQALAQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRIATINTHGTGCTLASAIS 452 (504)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeECCCCCCChHHHHHHHHH
Confidence 999964 222 235567788899999999999963 344543 3456788888899999999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+++++|.+ +++|+++|.+.-...+..
T Consensus 453 a~la~G~~-------l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 453 SFLARGYT-------VPDAVERAIGYVHEAIVR 478 (504)
T ss_pred HHHhCCCC-------HHHHHHHHHHHHHHHHHh
Confidence 99999999 999999998877766654
|
|
| >PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=142.23 Aligned_cols=162 Identities=15% Similarity=0.159 Sum_probs=122.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCe-EEEeCCCCCC---CCCChHHHHHhH-HhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRLP---LWPSADKAREGI-LSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~---~~~~~~~~~~~~-~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.+|.+. +.+.+..+++.+++.+.+ +++||..... .+.+ +...+.+ .++++++|+++||..|++.
T Consensus 78 ~~~aik~G~l~-----~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~-~~~~~~l~~~Ll~~adiitPN~~Ea~~ 151 (502)
T PLN02898 78 PVDVVKTGMLP-----SAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAG-PSILSALREELLPLATIVTPNVKEASA 151 (502)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCC-HHHHHHHHHhhhccCeEEcCCHHHHHH
Confidence 45677776542 256777788888887774 9999953221 1111 2223334 3578999999999999999
Q ss_pred ccCCCC-Cc---HHHHHHHHHhCCCcEEEEEecCCc------EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 280 LTQGED-PY---DDAVVYKLFHANLKLLLVTEGPDG------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 280 l~~~~~-~~---~~~~~~~l~~~g~~~vvvT~G~~G------~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
|+|... .+ ..+.++++.+.|++.|+||.|+.+ .+++++++.++++.++++.+|++|+||+|.|+|+++++
T Consensus 152 L~g~~~~~~~~~~~~~a~~l~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~t~GaGD~fsaaiaa~l~ 231 (502)
T PLN02898 152 LLGGDPLETVADMRSAAKELHKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRIKTRNTHGTGCTLASCIAAELA 231 (502)
T ss_pred HhCCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEecceeCCCCCCchhhhHHHHHHHHHH
Confidence 998532 12 235567888889999999999853 35566555667888888889999999999999999999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 350 TDFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 350 ~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
+|++ +++|+++|+.+....+...
T Consensus 232 ~G~~-------l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 232 KGSD-------MLSAVKVAKRYVETALEYS 254 (502)
T ss_pred cCCC-------HHHHHHHHHHHHHHHHHhh
Confidence 9999 9999999999999888763
|
|
| >KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.3e-14 Score=134.36 Aligned_cols=230 Identities=20% Similarity=0.260 Sum_probs=157.3
Q ss_pred EEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 64 VCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 64 ~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
+++|...+|+...++.-.+.+ .....+..||.+.|.|.++++||+++.+|+. ||+|.
T Consensus 344 v~vGa~i~D~~~k~d~d~K~dG~sy~~~~~Qa~GGVarN~A~a~~~lg~d~~liSa-------------------vG~d~ 404 (614)
T KOG3009|consen 344 VSVGATIVDFEAKTDEDVKDDGGSYNGQVVQAMGGVARNHADALARLGCDSVLISA-------------------VGDDN 404 (614)
T ss_pred eeecceEEEeEEeecccccccCCcccchhhhhccchhhhHHHHHHHhcCCeeEEEE-------------------eccCC
Confidence 999999999998887644432 3346789999999999999999999999999 99983
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
.|++.+.. + ...-+..++++ .++++.+++-
T Consensus 405 n~~~~~~~----------------------------------------~----~~~~e~~~dl~-~a~~I~~DsN----- 434 (614)
T KOG3009|consen 405 NGHFFRQN----------------------------------------S----HKIVESNEDLL-SADFILLDSN----- 434 (614)
T ss_pred cchhhhhh----------------------------------------h----hhhhhhhhhhh-cCCEEEEcCC-----
Confidence 11111100 0 01111222344 7888877653
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhHHhccc-CCCC---CcH----H-
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISFLT-QGED---PYD----D- 289 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E~~~l~-~~~~---~~~----~- 289 (400)
+....+.++++ ++.+.++|+|+|.. .......++-++ ..++.++||..|+-... +... ++. .
T Consensus 435 iS~~~Ma~il~-ak~~k~~V~fEPTd-------~~k~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~ 506 (614)
T KOG3009|consen 435 ISVPVMARILE-AKKHKKQVWFEPTD-------IDKVKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADG 506 (614)
T ss_pred CCHHHHHHHHH-hhhccCceEecCCC-------chhhhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchH
Confidence 44567888888 99999999999953 223333333322 25899999999984222 1111 110 1
Q ss_pred --HHH---HHHHhCCCcEEEEEecCCcEEEEeCCc-----eEEEccccc--cccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 290 --AVV---YKLFHANLKLLLVTEGPDGCRYYTKDF-----SGRVQGLKV--EAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 290 --~~~---~~l~~~g~~~vvvT~G~~G~~~~~~~~-----~~~vpa~~v--~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
+.+ +.........+|+|.-.+|+++...+. ....|++.+ ++++..||||+|++||+.+++.+.+
T Consensus 507 ~~~~~~~~~~k~~~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g~i~~l~~~~~---- 582 (614)
T KOG3009|consen 507 VLELIEKEKTKLLLNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSGVIAGLAHNKT---- 582 (614)
T ss_pred HHHHHHHHHHHhhcccceEEEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccceeehhhcCcc----
Confidence 111 222334677899999999998877652 333444433 7999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhc
Q 015777 358 EDQLRDALRFANACGALTVM 377 (400)
Q Consensus 358 ~~~l~~al~~A~a~Aa~~v~ 377 (400)
+.+++.-+..++-...+
T Consensus 583 ---v~es~~gg~~~~ralls 599 (614)
T KOG3009|consen 583 ---VVESLQGGQECARALLS 599 (614)
T ss_pred ---hHhhccccHHHHHHHHh
Confidence 99999998555544443
|
|
| >PLN02978 pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-12 Score=127.21 Aligned_cols=162 Identities=17% Similarity=0.055 Sum_probs=115.0
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCC--CCCCChHHHHHhHH-hhhccCcEEEcCHhHHhcc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL--PLWPSADKAREGIL-SIWETADIIKISEEEISFL 280 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~--~~~~~~~~~~~~~~-~ll~~~dvl~~N~~E~~~l 280 (400)
++.+.++-+ ......+.+.++++.+++ .++++++||..+. .+|.. +...+.++ .+++.+|+++||+.|++.|
T Consensus 87 ~~ai~~G~l--~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~-~~~~~~~~~~ll~~adiitPN~~Ea~~L 163 (308)
T PLN02978 87 YTHLLTGYI--GSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVP-PELVPVYREKVVPLATMLTPNQFEAEQL 163 (308)
T ss_pred cCEEEeccc--CCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCC-hhHHHHHHHHHHhhCCeeccCHHHHHHH
Confidence 666766543 234445677778887776 4578999998654 34433 33445564 5899999999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEEecC-CcEEEEeC---------CceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVTEGP-DGCRYYTK---------DFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~-~G~~~~~~---------~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
+|.+..+. .++++++.+.|++.||||-+. +|...... ++.+++..++++.. ++|+||+|.|.+++.
T Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~GtGD~fsA~laa~ 242 (308)
T PLN02978 164 TGIRIVTEEDAREACAILHAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKIPAY-FTGTGDLMAALLLGW 242 (308)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCCCCC-CCCchHHHHHHHHHH
Confidence 99764433 355677888899999998754 34332211 24556666666655 489999999988888
Q ss_pred HHcC-CccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 348 LSTD-FSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 348 l~~g-~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+.+| .+ +++|+++|...-...+..
T Consensus 243 l~~g~~~-------l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 243 SHKYPDN-------LDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HhcCCcC-------HHHHHHHHHHHHHHHHHH
Confidence 8887 68 999999998877766654
|
|
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=134.69 Aligned_cols=159 Identities=18% Similarity=0.151 Sum_probs=111.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
..+.+.+|-+ ......+.+.++++.. .+.+|++||..+. .++ .+...+.++++++++|+++||..|++.|
T Consensus 98 ~~~aikiG~l--~s~~~i~~v~~~l~~~--~~~~vVlDPv~~~~~G~~l~--~~~~~~~~~~Ll~~advItPN~~Ea~~L 171 (530)
T PRK14713 98 TVDAVKIGML--GDAEVIDAVRTWLAEH--RPPVVVLDPVMVATSGDRLL--EEDAEAALRELVPRADLITPNLPELAVL 171 (530)
T ss_pred CCCEEEECCc--CCHHHHHHHHHHHHhC--CCCCEEECCcccCCCCCCCC--CHHHHHHHHHHhhhhheecCChHHHHHH
Confidence 3466666543 2222233444444332 2346999998653 233 2345666778999999999999999999
Q ss_pred cCCCCC-cHH---HHHHHHHhCCCcEEEEEecCCc-----EEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGEDP-YDD---AVVYKLFHANLKLLLVTEGPDG-----CRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~~~-~~~---~~~~~l~~~g~~~vvvT~G~~G-----~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.+.. +.+ ++++++.+.+...||||.|..+ ..++. +++.++++.++++.+|++|+||+|.|+|+++|++
T Consensus 172 tg~~~~~~~~d~~~aa~~L~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v~~~~t~GaGD~fsaalaa~La~ 251 (530)
T PRK14713 172 LGEPPATTWEEALAQARRLAAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRVDTRNTHGTGCSLSSALATRLGR 251 (530)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeeeCCCCCCcHHHHHHHHHHHHHHC
Confidence 996532 222 3456776665578999988642 33444 4446778888889999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHh
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
|.+ +++|+++|...-...+
T Consensus 252 G~~-------l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 252 GGD-------WAAALRWATAWLHGAI 270 (530)
T ss_pred CCC-------HHHHHHHHHHHHHHHH
Confidence 999 9999999987433333
|
|
| >cd01171 YXKO-related B | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.2e-12 Score=121.47 Aligned_cols=158 Identities=15% Similarity=-0.016 Sum_probs=114.3
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHH--hhhccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL--SIWETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~--~ll~~~dvl~~N~~E~~ 278 (400)
..+.+.|+++++.- +... +...++++.++++++++++|+... .+..... .+.+.+++++||..|++
T Consensus 73 ~~~~~~d~v~ig~g-l~~~---~~~~~i~~~~~~~~~pvVlDa~~~--------~~~~~~~~~~~~~~~~iltPn~~E~~ 140 (254)
T cd01171 73 ELLERADAVVIGPG-LGRD---EEAAEILEKALAKDKPLVLDADAL--------NLLADEPSLIKRYGPVVLTPHPGEFA 140 (254)
T ss_pred hhhccCCEEEEecC-CCCC---HHHHHHHHHHHhcCCCEEEEcHHH--------HHhhcChhhhccCCCEEECCCHHHHH
Confidence 34567888888652 2111 566778888888899999998521 1111100 13567999999999999
Q ss_pred cccCCCCCc----HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 279 FLTQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 279 ~l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
.|++....+ ..+.++++.+++. .+++..|. +.+++++++.++++....+.++++|+||+|.|.+.+.+.+|++
T Consensus 141 ~L~g~~~~~~~~~~~~~a~~l~~~~~-~~vvlkG~-~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~g~~- 217 (254)
T cd01171 141 RLLGALVEEIQADRLAAAREAAAKLG-ATVVLKGA-VTVIADPDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLS- 217 (254)
T ss_pred HHhCCChhhhhhHHHHHHHHHHHHcC-cEEEEcCC-CCEEECCCCcEEEECCCCcccccCchHHHHHHHHHHHHHcCCC-
Confidence 999976432 1245677777764 45556674 6666766555677777788999999999998888888889999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhccc
Q 015777 355 LQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
+++|+++|+.+.+.+.+..
T Consensus 218 ------~~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 218 ------PLEAAALAVYLHGLAGDLA 236 (254)
T ss_pred ------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888753
|
subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily. |
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.4e-12 Score=138.42 Aligned_cols=160 Identities=14% Similarity=0.138 Sum_probs=119.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhC-CCeEEEeCCCCCC----CCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLP----LWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~----~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.+|-+. +.+....+.+.+++. +.++++||..... ++ .+...+.++++++.+|+++||..|++.
T Consensus 310 ~~~aiKiGmL~-----s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~--~~~~~~~l~~Llp~adlItPN~~Ea~~ 382 (755)
T PRK09517 310 TVDAVKLGMLG-----SADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLL--DADATEALRRLAVHVDVVTPNIPELAV 382 (755)
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCC--CHHHHHHHHHHhCcccCccCCHHHHHH
Confidence 35667766431 245666777777774 5779999975422 22 123344456789999999999999999
Q ss_pred ccCCC-CCcH---HHHHHHHHhCCCcEEEEEecC------CcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 280 LTQGE-DPYD---DAVVYKLFHANLKLLLVTEGP------DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 280 l~~~~-~~~~---~~~~~~l~~~g~~~vvvT~G~------~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
|+|.. ..+. .+.++++.+.+...||||.|. .|+++..++..++++.++++.+|++|+||+|.|+|+++|+
T Consensus 383 L~g~~~~~~~~d~~~aa~~L~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v~~~~t~GaGDtfsaaiaa~La 462 (755)
T PRK09517 383 LCGEAPAITMDEAIAQARGFARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRVNTTNSHGTGCSLSAALATLIA 462 (755)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeecccCCCCCcChHHHHHHHHHHHHH
Confidence 99953 2222 234567766544589999994 5676665555678888889999999999999999999999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 350 TDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 350 ~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|.+ +++|+++|...-...+..
T Consensus 463 ~G~s-------l~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 463 AGES-------VEKALEWATRWLNEALRH 484 (755)
T ss_pred CCCC-------HHHHHHHHHHHHHHHHHh
Confidence 9999 999999999888877754
|
|
| >PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.8e-12 Score=118.11 Aligned_cols=161 Identities=19% Similarity=0.190 Sum_probs=111.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC---CCCCChHHHHHhHHh-hhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL---PLWPSADKAREGILS-IWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~~~~~~~~~~~~~-ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+.+|-+. +.+.+..+.+..++.+.++++||.... .... .+...+.+++ +++.+|+++||..|++.|
T Consensus 60 ~~~aikiG~l~-----~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~-~~~~~~~~~~~Llp~AdiitPN~~Ea~~L 133 (246)
T PF08543_consen 60 KFDAIKIGYLG-----SAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYV-DPDVVEAMREELLPLADIITPNLTEAELL 133 (246)
T ss_dssp C-SEEEE-S-S-----SHHHHHHHHHHHHHTTTEEEEE---EETTTECTS-SHHHHHHHHHHCGGG-SEEE-BHHHHHHH
T ss_pred cccEEEEcccC-----CchhhhhHHHHHhccCCCEEEecccccCCCCcCC-CHHHHHHHHhccCCcCeEEeCCHHHHHHH
Confidence 67888877542 234555556666667789999995321 1111 2334445554 999999999999999999
Q ss_pred cCCCCCcHH---HHHHHHHhCCCcEEEEEecCC----c---EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGEDPYDD---AVVYKLFHANLKLLLVTEGPD----G---CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~~~~~~---~~~~~l~~~g~~~vvvT~G~~----G---~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.+..+.+ +++++++++|++.|+||-+.. + -+++.+++.+.+..++.+..+..|.||.|.++|++.|++
T Consensus 134 ~g~~i~~~~~~~~~~~~l~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~GTGd~fss~laa~l~~ 213 (246)
T PF08543_consen 134 TGREINSEEDIEEAAKALLALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRIPTGSFHGTGDLFSSALAAFLAK 213 (246)
T ss_dssp HTS--SSHHHHHHHHHHHHHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEECTSGCTTHHHHHHHHHHHHHHT
T ss_pred hCCCCCChHhHHHHHHHHHHhCCceEEEeeeccccccccccceeeeccceeecceeEEcCCCCCCchhHHHHHHHHHHHc
Confidence 997665543 456888899999999998863 2 344555666666666666678999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|.+ +++|++.|...-...+..
T Consensus 214 g~~-------l~~Av~~A~~~v~~~i~~ 234 (246)
T PF08543_consen 214 GYS-------LEEAVEKAKNFVRRAIKN 234 (246)
T ss_dssp TSS-------HHHHHHHHHHHHHHHHHH
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999998877776653
|
7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D .... |
| >cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.7e-12 Score=116.20 Aligned_cols=164 Identities=18% Similarity=0.019 Sum_probs=116.2
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc--CcEEEcCHhHH
Q 015777 200 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEI 277 (400)
Q Consensus 200 ~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~--~dvl~~N~~E~ 277 (400)
.+.++++|+++++.- +..+...+.+..+++.+++.++++++||..... +... .+.+.+++.. +|+++||..|+
T Consensus 44 ~~~l~~~d~vvi~~G-~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~---~~~~-~~~~~~ll~~~~~~ilTPN~~Ea 118 (242)
T cd01170 44 EELAKIAGALVINIG-TLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGA---TSFR-TEVAKELLAEGQPTVIRGNASEI 118 (242)
T ss_pred HHHHHHcCcEEEeCC-CCChHHHHHHHHHHHHHHhcCCCEEEcccccCc---chhH-HHHHHHHHhcCCCeEEcCCHHHH
Confidence 366788898888532 223334556667777788899999999964321 1111 1234455554 99999999999
Q ss_pred hcccCCCCC------------cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHH
Q 015777 278 SFLTQGEDP------------YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGIL 345 (400)
Q Consensus 278 ~~l~~~~~~------------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl 345 (400)
..|++.... +..+.++++.+++...|++| |.... ++++++.++++..+..+.++.|+||+|.|++.
T Consensus 119 ~~L~g~~~~~~~~~~~~~~~~~~~~aa~~l~~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~~~~~v~GtGdtLa~aiA 196 (242)
T cd01170 119 AALAGLTGLGKGVDSSSSDEEDALELAKALARKYGAVVVVT-GEVDY-ITDGERVVVVKNGHPLLTKITGTGCLLGAVIA 196 (242)
T ss_pred HHHhCCCCCcCcccCCCcchHHHHHHHHHHHHHhCCEEEEE-CCCcE-EEECCEEEEEeCCCccccCCCchHHHHHHHHH
Confidence 999986532 12345567776666678898 66654 55666677777655455667999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
..+.+|.+ +.+|+..|...-+..+.
T Consensus 197 a~LA~g~~-------~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 197 AFLAVGDD-------PLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHhCCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999 99999999766665553
|
A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. |
| >COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.1e-11 Score=111.11 Aligned_cols=161 Identities=14% Similarity=0.108 Sum_probs=122.6
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCCCC---CChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLPLW---PSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~~~---~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+-++-+ .+.+.+..+.+..++++ .++++||......- ...+......++++|+++++.||..|++.|
T Consensus 72 ~v~avKtGML-----~~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L 146 (263)
T COG0351 72 PVDAVKTGML-----GSAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEAL 146 (263)
T ss_pred CCCEEEECCc-----CCHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHH
Confidence 3456665533 23567778888888888 78999995332211 122333334447999999999999999999
Q ss_pred cCC-CCCcHHH---HHHHHHhCCCcEEEEEecCCc----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 281 TQG-EDPYDDA---VVYKLFHANLKLLLVTEGPDG----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 281 ~~~-~~~~~~~---~~~~l~~~g~~~vvvT~G~~G----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
+|. ...+.++ +.+.+.+.|++.|+||-|... -++|.++..+.+..+.++-.++-|+|++|.+++.+.|++|.
T Consensus 147 ~g~~~i~~~~d~~~a~~~i~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri~t~~tHGTGCTlSaAIaa~LA~G~ 226 (263)
T COG0351 147 SGLPKIKTEEDMKEAAKLLHELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRIPTKNTHGTGCTLSAAIAANLAKGL 226 (263)
T ss_pred cCCCccCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCceeEEEcCCceEEEeccccCCCCCCCccHHHHHHHHHHHHcCC
Confidence 995 5544433 335666889999999988754 35566666777788888999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+ +++|++.|-..-...+.
T Consensus 227 ~-------l~~AV~~Ak~fv~~AI~ 244 (263)
T COG0351 227 S-------LEEAVKKAKEFVTRAIR 244 (263)
T ss_pred C-------HHHHHHHHHHHHHHHHh
Confidence 9 99999999988887777
|
|
| >TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.6e-11 Score=113.74 Aligned_cols=175 Identities=15% Similarity=0.055 Sum_probs=118.6
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.++.+|++.+++- +... +.+.++++.+++.++++++|+. ...+..........+++++||..|++.|
T Consensus 88 ~~~~~~davvig~G-l~~~---~~~~~l~~~~~~~~~pvVlDa~--------g~~l~~~~~~~~~~~~vItPN~~El~~L 155 (272)
T TIGR00196 88 ELLERYDVVVIGPG-LGQD---PSFKKAVEEVLELDKPVVLDAD--------ALNLLTYDKPKREGEVILTPHPGEFKRL 155 (272)
T ss_pred hhhccCCEEEEcCC-CCCC---HHHHHHHHHHHhcCCCEEEEhH--------HHHHHhhcccccCCCEEECCCHHHHHHH
Confidence 44567888888652 2222 2266778888888999999984 2222222211134689999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
+|...... .+.++++.+. ...+|++.|..+.++..++..+. .....+..+++|+||++.|.+.+.+.+|.+
T Consensus 156 ~g~~~~~~~~~~~aa~~l~~~-~~~vVv~kG~~~~i~~~~~~~~~-~~~~~~~~~~~GaGD~lag~iaa~la~g~~---- 229 (272)
T TIGR00196 156 LGLVNEIQGDRLEAAQDIAQK-LQAVVVLKGAADVIAAPDGDLWI-NKTGNAALAKGGTGDVLAGLIGGLLAQNLD---- 229 (272)
T ss_pred hCCchhhhhhHHHHHHHHHHH-hCCEEEEcCCCCEEEcCCCeEEE-ECCCCCccCCCCchHHHHHHHHHHHhCCCC----
Confidence 99754322 2445666665 34588889999986654444444 344567788999999965555555668998
Q ss_pred hHHHHHHHHHH---HHHHHHHhccc-CCCCCCCCHHHHHHHHhCC
Q 015777 358 EDQLRDALRFA---NACGALTVMER-GAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 358 ~~~l~~al~~A---~a~Aa~~v~~~-G~~~~~p~~~~l~~~l~~~ 398 (400)
+.+|+..| +..|+..+... |+.. .+.+||.+.+.+.
T Consensus 230 ---~~~A~~~a~~~~~~a~~~~~~~~g~~~--~~~~dl~~~i~~~ 269 (272)
T TIGR00196 230 ---PFDAACNAAFAHGLAGDLALKNHGAYG--LTALDLIEKIPRV 269 (272)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCCC--cCHHHHHHHHHHH
Confidence 89999777 77787776554 6432 4778888877654
|
The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. |
| >COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.2e-10 Score=103.41 Aligned_cols=166 Identities=23% Similarity=0.149 Sum_probs=116.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhC--CCeEEEeCC--CCCCCCCChHHHHHhHHhhhccCcEEEcCHhH
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA--GVVLSYDPN--LRLPLWPSADKAREGILSIWETADIIKISEEE 276 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~--~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E 276 (400)
+.+..+|.+..|.+ ........+.++++..|+. ...+++||. ....++...+.......++++.+|++.||..|
T Consensus 69 ~~~~~~davltGYl--gs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fE 146 (281)
T COG2240 69 DKLGECDAVLTGYL--GSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFE 146 (281)
T ss_pred ccccccCEEEEccC--CCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHH
Confidence 45678888876643 3344455666777777776 456899994 22244443333333333689999999999999
Q ss_pred HhcccCCCCCcHHHH---HHHHHhCCCcEEEEEecCC-----cEEEEeCC---ceEEEccccccccCCCCchHHHHHHHH
Q 015777 277 ISFLTQGEDPYDDAV---VYKLFHANLKLLLVTEGPD-----GCRYYTKD---FSGRVQGLKVEAVDATGAGDAFVAGIL 345 (400)
Q Consensus 277 ~~~l~~~~~~~~~~~---~~~l~~~g~~~vvvT~G~~-----G~~~~~~~---~~~~vpa~~v~vvDttGAGDaF~Agfl 345 (400)
++.|+|....+.+++ ++.|.+.|.+.|+||.=.. |.+++... ...|+- +.++ .+.+|.||.|.|.|+
T Consensus 147 Le~Ltg~~~~~~~da~~aa~~L~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v~-~~~~GtGDL~salll 224 (281)
T COG2240 147 LEILTGKPLNTLDDAVKAARKLGADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLVP-FIPNGTGDLFSALLL 224 (281)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHhhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcCC-CCCCCchHHHHHHHH
Confidence 999999987665544 4666677899999995433 55555433 233443 3333 339999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+++++|.+ +++|+..+..+-...+.
T Consensus 225 a~lL~g~~-------~~~al~~~~~~V~evl~ 249 (281)
T COG2240 225 ARLLEGLS-------LTQALERATAAVYEVLQ 249 (281)
T ss_pred HHHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999 99999998877766655
|
|
| >PRK09355 hydroxyethylthiazole kinase; Validated | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.6e-09 Score=99.42 Aligned_cols=175 Identities=18% Similarity=0.085 Sum_probs=112.3
Q ss_pred CCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-
Q 015777 187 PSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE- 265 (400)
Q Consensus 187 ~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~- 265 (400)
.++-|...++++. +.++.++.++++. ....+...+.+..+++.+++.++++++||...... ... .+...++++
T Consensus 37 ~sp~m~~~~~e~~-~~~~~~~alvi~~-G~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~-~~~---~~~~~~ll~~ 110 (263)
T PRK09355 37 ASPAMAHAPEEAE-EMAKIAGALVINI-GTLTEERIEAMLAAGKIANEAGKPVVLDPVGVGAT-SYR---TEFALELLAE 110 (263)
T ss_pred CCcccCCCHHHHH-HHHHhcCceEEeC-CCCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcc-hhh---HHHHHHHHHh
Confidence 3334444444443 5667778777643 33344334445666777888999999999653221 111 122223333
Q ss_pred -cCcEEEcCHhHHhcccCCCCC-----------cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCC
Q 015777 266 -TADIIKISEEEISFLTQGEDP-----------YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDA 333 (400)
Q Consensus 266 -~~dvl~~N~~E~~~l~~~~~~-----------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDt 333 (400)
++++++||..|+..|++.... +..+.++++.+++...|++|-+.+ ++++++..+.++.-.....+.
T Consensus 111 ~~~~vItPN~~E~~~L~g~~~~~~~vd~~~~~~~~~~~a~~la~~~~~~VvvkG~~d--~I~~~~~~~~~~~g~~~~~~v 188 (263)
T PRK09355 111 VKPAVIRGNASEIAALAGEAAETKGVDSTDGSADAVEIAKAAAKKYGTVVVVTGEVD--YITDGERVVSVHNGHPLMTKV 188 (263)
T ss_pred cCCcEecCCHHHHHHHhCCCcccCCcCCCCCHHHHHHHHHHHHHHhCCEEEEECCCc--EEEeCCEEEEEeCCCcccCCc
Confidence 689999999999999986421 223455677776666788885443 444555555555323345566
Q ss_pred CCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 015777 334 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
+|+||++.|.+.+.+..|.+ +.+|+..|...-+.+-
T Consensus 189 ~GtGc~L~~~iaa~lA~g~~-------~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 189 TGTGCLLSAVVAAFAAVEKD-------YLEAAAAACAVYGIAG 224 (263)
T ss_pred ccccHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHH
Confidence 99999999999999999998 8888888876554443
|
|
| >PTZ00493 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.2e-09 Score=100.90 Aligned_cols=161 Identities=10% Similarity=0.033 Sum_probs=106.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhC------CCeEEEeCCCCCCCCC---C-hHHHHHhHHhhhccCcEEEcCHh
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDA------GVVLSYDPNLRLPLWP---S-ADKAREGILSIWETADIIKISEE 275 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~------g~~v~~D~~~~~~~~~---~-~~~~~~~~~~ll~~~dvl~~N~~ 275 (400)
.+.+-+|-+. +.+.+..+.+..++. ..++++||......-. . .+......+.+++++|++.||..
T Consensus 74 i~aIKiGmL~-----s~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~ 148 (321)
T PTZ00493 74 IDVVKLGVLY-----SKKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFY 148 (321)
T ss_pred CCEEEECCcC-----CHHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHH
Confidence 5677766432 234445555555443 2248999963222111 1 12223333569999999999999
Q ss_pred HHhcccC-----CCCC--cHHHHHHHHHh-CCCcEEEEEecCCc------E------EEEeC---------------C--
Q 015777 276 EISFLTQ-----GEDP--YDDAVVYKLFH-ANLKLLLVTEGPDG------C------RYYTK---------------D-- 318 (400)
Q Consensus 276 E~~~l~~-----~~~~--~~~~~~~~l~~-~g~~~vvvT~G~~G------~------~~~~~---------------~-- 318 (400)
|++.|++ .... +..++++++.+ +|++.|+||-|... . +++.+ +
T Consensus 149 Ea~~L~g~~~~~~~~~~~~~~~aA~~l~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~~~~~ 228 (321)
T PTZ00493 149 ECKVILEALDCQMDLSKANMTELCKLVTEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQIDAGGV 228 (321)
T ss_pred HHHHHhCCCcccCCCCHHHHHHHHHHHHHhcCCCEEEECcCCCcccccccccccceeEEecCCccccccccccccccccc
Confidence 9999998 2211 22355677776 69999999987632 1 22321 1
Q ss_pred ----ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 319 ----FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 319 ----~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+.+++...+++..++.|.||+|.+++++.|++|.+ +++|++.|...-...+..
T Consensus 229 ~~~~~~~~~~~~ri~~~~~hGTGc~fASAIAa~LA~G~~-------l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 229 TYLYDVYKLRSKRKPGKDIHGTGCTLSTAIACYLAKKHN-------ILQSCIESKKYIYNCIRY 285 (321)
T ss_pred cccceEEEEEecccCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 12345555555667899999999999999999999 999999998777666654
|
|
| >TIGR00694 thiM hydroxyethylthiazole kinase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-08 Score=94.66 Aligned_cols=194 Identities=19% Similarity=0.070 Sum_probs=116.0
Q ss_pred CccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--
Q 015777 188 SADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-- 265 (400)
Q Consensus 188 ~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-- 265 (400)
++-|...++++. ++.+.++.+.+..-.+ .+...+.+..+++.+++.++|+++||..... +..+. +...++++
T Consensus 33 sp~m~~~~~e~~-~~~~~~~al~ik~G~l-~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~---s~~r~-~~~~~Ll~~~ 106 (249)
T TIGR00694 33 SPVMSEAEEEVA-ELAKIAGALVINIGTL-DKESIEAMIAAGKSANELGVPVVLDPVGVGA---TKFRT-ETALELLSEG 106 (249)
T ss_pred ChhhcCCHHHHH-HHHHHcCceEEeCCCC-CHHHHHHHHHHHHHHHhcCCCEEEccccccc---chhHH-HHHHHHHhhc
Confidence 333444454443 5556677666543222 2233456667777788889999999974322 22221 23344555
Q ss_pred cCcEEEcCHhHHhcccCCCC-----------CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCC
Q 015777 266 TADIIKISEEEISFLTQGED-----------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDAT 334 (400)
Q Consensus 266 ~~dvl~~N~~E~~~l~~~~~-----------~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDtt 334 (400)
+++++++|..|++.|++... .+..+.++++.+++...|++|-+.+ +++++++.+.+..-....-..+
T Consensus 107 ~~~vITpN~~E~~~L~g~~~~~~gvd~~~~~~d~~~~a~~la~~~~~~VllkG~~D--~i~~~~~~~~~~~g~~~~~~~~ 184 (249)
T TIGR00694 107 RFAAIRGNAGEIASLAGETGLMKGVDSGEGAADAIRAAQQAAQKYGTVVVITGEVD--YVSDGTSVYTIHNGTELLGKIT 184 (249)
T ss_pred CCceeCCCHHHHHHHhCCCCCCCCcCCccchHHHHHHHHHHHHHhCCEEEEECCCc--EEEeCCEEEEECCCChHHhCCc
Confidence 47999999999999998541 1123455667666444777764432 4555555555433222122247
Q ss_pred CchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc---ccCCCCCCCCHHHHHHHHhC
Q 015777 335 GAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM---ERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 335 GAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~---~~G~~~~~p~~~~l~~~l~~ 397 (400)
|.||++.+.+.+.+.+|.+ +.+|+..|...-..+.. +.+..++. ...++.+.|.+
T Consensus 185 GtGc~LssaIaa~LA~g~~-------~~~A~~~A~~~~~~a~~~a~~~~~g~g~-~~~~l~d~l~~ 242 (249)
T TIGR00694 185 GSGCLLGSVVAAFCAVEED-------PLDAAISACLLYKIAGELAAERSKGPGS-FQIELLDALSQ 242 (249)
T ss_pred cchHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHHHHhcCCCCcc-HHHHHHHHHHc
Confidence 9999999999999999999 88998888744333332 22111222 35566665544
|
This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE. |
| >KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.3e-06 Score=75.86 Aligned_cols=161 Identities=21% Similarity=0.139 Sum_probs=99.0
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCC--CCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhH
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPN--LRLPLWPSADKAREGILSIW-ETADIIKISEEE 276 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~--~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E 276 (400)
.+...+.+..|-+. .......+.++.+..|+.+ ...++||. ...+++.+ +.....+++++ +.+|++.||..|
T Consensus 78 n~~~Y~~vLTGY~~--n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~-eelipvYr~~i~~ladiiTPNqFE 154 (308)
T KOG2599|consen 78 NLNKYDAVLTGYLP--NVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVP-EELIPVYRDLIIPLADIITPNQFE 154 (308)
T ss_pred cccccceeeeeccC--ChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEecc-HHHHHHHHHhhcchhhhcCCcchh
Confidence 34466776555332 2223445556666666654 56677883 33344443 34445555554 459999999999
Q ss_pred HhcccCCCCCcHHHH---HHHHHhCCCcEEEEEecCC----cEEEE----eCC-ceEEEccccccccCCCCchHHHHHHH
Q 015777 277 ISFLTQGEDPYDDAV---VYKLFHANLKLLLVTEGPD----GCRYY----TKD-FSGRVQGLKVEAVDATGAGDAFVAGI 344 (400)
Q Consensus 277 ~~~l~~~~~~~~~~~---~~~l~~~g~~~vvvT~G~~----G~~~~----~~~-~~~~vpa~~v~vvDttGAGDaF~Agf 344 (400)
++.|+|....+.+++ +++++++|++.||||...- |..++ ..+ +.+.+.-+++.. --||.||.|.|-+
T Consensus 155 ~EiLtg~~I~t~eda~~a~~~lhq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki~~-~FtGTGDLfsaLL 233 (308)
T KOG2599|consen 155 AEILTGMEIRTEEDAKRAVEKLHQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKIDG-VFTGTGDLFSALL 233 (308)
T ss_pred hhhhcCCeeccHHHHHHHHHHHHHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEecccce-EEecccHHHHHHH
Confidence 999999998876654 4677888999999996543 42222 222 333333333221 2389999999988
Q ss_pred HHHHHcCCccccchHHHHHHHHHHHH
Q 015777 345 LSQLSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 345 l~~l~~g~~~~~~~~~l~~al~~A~a 370 (400)
++.+.+-.+ ..++..++..+..
T Consensus 234 la~~~~~~~----~~~l~~a~e~~ls 255 (308)
T KOG2599|consen 234 LAWLHESPD----NDDLSKAVEQVLS 255 (308)
T ss_pred HHHHhcCCC----cchHHHHHHHHHH
Confidence 888877642 1235555555443
|
|
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.1e-05 Score=76.81 Aligned_cols=162 Identities=17% Similarity=0.084 Sum_probs=111.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC---CCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
+|+++-.|-++ .+.....+.+.++. .+-..+++||..... .....+-..-..++++|.+||+.+|..|+-.|.
T Consensus 92 ~C~VvKTGML~--~~~I~~vi~q~l~~--~~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll 167 (523)
T KOG2598|consen 92 KCDVVKTGMLP--SPEIVKVIEQSLQK--FNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILL 167 (523)
T ss_pred cccEEeecCcC--chHHHHHHHHHHHh--hcCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHH
Confidence 57777766432 22223334444433 233578899842211 111233445566779999999999999999998
Q ss_pred CCCC------Cc---HHHHHHHHHhCCCcEEEEEecCCcE-----------------EEEeCCceEEEccccccccCCCC
Q 015777 282 QGED------PY---DDAVVYKLFHANLKLLLVTEGPDGC-----------------RYYTKDFSGRVQGLKVEAVDATG 335 (400)
Q Consensus 282 ~~~~------~~---~~~~~~~l~~~g~~~vvvT~G~~G~-----------------~~~~~~~~~~vpa~~v~vvDttG 335 (400)
+... .+ -+..+..+.+.|+++|+++.|.-.. ++|.+.+.+.++.+-+.-..+-|
T Consensus 168 ~~~~~~~~~i~~v~di~~~~~~ihk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~~t~~tHG 247 (523)
T KOG2598|consen 168 KKEKREISKIQSVFDIAKDAAKIHKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYLATKHTHG 247 (523)
T ss_pred hhcccCCcccccHHHHHHHHHHHHhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEecccccccccccC
Confidence 8422 11 1334567888999999999875321 34556677788888788889999
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|-+..+++..-|+.|.+ +.+|++.|...--.+++
T Consensus 248 tgCtLaSAIASnLA~g~s-------l~qAv~~ai~yvq~Ai~ 282 (523)
T KOG2598|consen 248 TGCTLASAIASNLARGYS-------LLQAVQGAIEYVQNAIA 282 (523)
T ss_pred ccchHHHHHHHHHhhcCC-------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999 88999888765444443
|
|
| >PRK03979 ADP-specific phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00043 Score=69.73 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=51.2
Q ss_pred CCccEEEEccccccCch-----h----HHHHHHHHHHH--hhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc
Q 015777 204 TKAKIFHYGSISLITEP-----C----KSAHIAAAKAA--KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI 272 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~-----~----~~~~~~~~~~a--~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~ 272 (400)
...|.++++|+-++.+. . .+...+.++.. +..++++.+.... +.+.+-....+..+++++|.+-+
T Consensus 221 ~~~D~avlSG~q~i~~~y~dg~~~~~~l~r~~~~i~~L~~~~~~i~iH~E~As----~~~~~ir~~i~~~ilp~vDSlGm 296 (463)
T PRK03979 221 KMVDGAILSGYQGIKEEYSDGKTAEYYLKRAKEDIKLLKKKNKDIKIHVEFAS----IQNREIRKKIITYILPHVDSVGM 296 (463)
T ss_pred cCCCEEEEechhhhhccccccccHHHHHHHHHHHHHHHhhCCCCceEEEEecc----ccCHHHHHHHHHhhccccccccC
Confidence 45899999998765441 1 22233344444 3457899999864 33456666667789999999999
Q ss_pred CHhHHhccc
Q 015777 273 SEEEISFLT 281 (400)
Q Consensus 273 N~~E~~~l~ 281 (400)
||.|+..+.
T Consensus 297 NE~ELa~l~ 305 (463)
T PRK03979 297 DETEIANIL 305 (463)
T ss_pred CHHHHHHHH
Confidence 999998665
|
|
| >PRK14039 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0014 Score=65.98 Aligned_cols=78 Identities=17% Similarity=0.156 Sum_probs=53.9
Q ss_pred hcCCccEEEEccccccCch------hHHH---HHHHHHHH--hhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 202 LITKAKIFHYGSISLITEP------CKSA---HIAAAKAA--KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~------~~~~---~~~~~~~a--~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
...+.|.++++|+.++.+. -.+. ..+.++.. +..++++.+.... +.+.+-....+..+++++|.+
T Consensus 207 ~~~~~D~avlSG~q~l~d~y~dg~~~~e~l~~~~~~i~~l~~~~~~i~iH~E~As----~~~~~i~~~v~~~Ilp~VDSl 282 (453)
T PRK14039 207 HAGEMDGALISGFHLLLETYPDGSTYREKLEDSLAQLKWWKSKNEKLRIHAELGH----FASKEIANSVFLILAGIVDSI 282 (453)
T ss_pred hccCCCEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHHHhcCCCceEEEEecC----cccHHHHHHHHHHhhcccccc
Confidence 3447899999998765331 1222 22334444 2345899999864 345666677777899999999
Q ss_pred EcCHhHHhcccCC
Q 015777 271 KISEEEISFLTQG 283 (400)
Q Consensus 271 ~~N~~E~~~l~~~ 283 (400)
-+||.|+..+...
T Consensus 283 GmNEqELa~l~~~ 295 (453)
T PRK14039 283 GMNEDELAMLANL 295 (453)
T ss_pred cCCHHHHHHHHHH
Confidence 9999999988765
|
|
| >PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0014 Score=60.99 Aligned_cols=146 Identities=19% Similarity=0.099 Sum_probs=86.2
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh--ccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW--ETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll--~~~dvl~~N~~E~~ 278 (400)
++.+.++.+++.--. ..+...+.+....+.+++.++|+++||..... ...-++...+++ -++++++.|..|..
T Consensus 45 e~~~~a~al~iNiGT-l~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGa----s~~R~~~~~~LL~~~~~~vIrGN~sEI~ 119 (246)
T PF02110_consen 45 EFASIADALVINIGT-LTDERIEAMKKAAKAANELGIPVVLDPVGVGA----SKFRTEFALELLNNYKPTVIRGNASEIA 119 (246)
T ss_dssp HHHHCTSEEEEESTT-SSHHHHHHHHHHHHHHHHTT--EEEE-TTBTT----BHHHHHHHHHHHCHS--SEEEEEHHHHH
T ss_pred HHHHHcCEEEEECCC-CCHhHHHHHHHHHHHHHHcCCCEEEeCcccCC----cHHHHHHHHHHHHhCCCcEEEeCHHHHH
Confidence 455566666543211 22333567788899999999999999964322 122234555666 37999999999999
Q ss_pred cccCCCCC---------cH--HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 279 FLTQGEDP---------YD--DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 279 ~l~~~~~~---------~~--~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
.|.+.... .. .+.++.+.++.-..|++| |+.-.+ .++.+.+.++--.--.-.-||.|+...+-+.+.
T Consensus 120 aLag~~~~~kGVDs~~~~~~~~~~a~~lA~k~~~vVvvT-G~~D~I-sdg~~~~~i~nG~~~l~~itGtGC~lgaliaaf 197 (246)
T PF02110_consen 120 ALAGEDSKAKGVDSGDSDEDAIEAAKQLAQKYNCVVVVT-GEVDYI-SDGNRVYRIPNGSPLLSKITGTGCMLGALIAAF 197 (246)
T ss_dssp HHHTCCCCSCSSSSSCGSHHHHHHHHHHHHHTTSEEEEE-SSSEEE-EESSCEEEECSSSGGGGGSTTHHHHHHHHHHHH
T ss_pred HHhCcCCCCCCcCcCCcchHHHHHHHHHHHhcCCEEEEe-cCCcEE-ECCCeEEEeCCCChHhcceeccchHHHHHHHHH
Confidence 99876531 11 244566655544445554 665443 444555665544333445599999877766666
Q ss_pred HHcCCc
Q 015777 348 LSTDFS 353 (400)
Q Consensus 348 l~~g~~ 353 (400)
+....+
T Consensus 198 ~av~~d 203 (246)
T PF02110_consen 198 LAVAED 203 (246)
T ss_dssp HCCCSS
T ss_pred Hhcccc
Confidence 656555
|
Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: |
| >TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0042 Score=62.40 Aligned_cols=153 Identities=13% Similarity=0.096 Sum_probs=91.1
Q ss_pred hhcCCccEEEEccccccCch---------hHHHHHHHHHHHhh-CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 201 SLITKAKIFHYGSISLITEP---------CKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~---------~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
++-..+|.++++|+.++.+. -.+...+.++..++ .++++.+.... +.+.+-....+..+++++|.+
T Consensus 205 ~i~~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~~~~i~~L~~~~~i~iH~E~As----~~~~~l~~~i~~~ilp~vDSl 280 (446)
T TIGR02045 205 EIGEPVDGAILSGYQGIKEEYSDGKTAKYYLERAKEDIELLKKNKDLKIHVEFAS----IQNREIRKKVVTNIFPHVDSV 280 (446)
T ss_pred hhhhcccEEEEEchhhhhhhccCCccHhHHHHHHHHHHHHHhhCCCCeEEEEecc----cccHHHHHHHHHhhccccccc
Confidence 44567899999998765432 12233444555533 67899999864 344666666777899999999
Q ss_pred EcCHhHHhccc---CCCCC-----------cHHHHHHHHHh-CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCC
Q 015777 271 KISEEEISFLT---QGEDP-----------YDDAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATG 335 (400)
Q Consensus 271 ~~N~~E~~~l~---~~~~~-----------~~~~~~~~l~~-~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttG 335 (400)
-+||.|+..+. |.... +..+.+..+++ .|.+.+.|-. .+....+...
T Consensus 281 GMNE~ELa~ll~~lg~~~l~~~i~~~~~i~~vi~a~~~l~~~~~leri~vHT---------~~y~l~i~~~--------- 342 (446)
T TIGR02045 281 GMDEAEIANVLSVLGYDELSDRIFRYNRIEDLILGAKILLDELNLEVVQVHT---------IYYIMYITHA--------- 342 (446)
T ss_pred cCCHHHHHHHHHHhcCCchhhhhhccccHHHHHHHHHHHHHHcCCCEEEEEe---------cceeEEEecc---------
Confidence 99999999876 22111 11223344443 4666555431 1111111110
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
+.+ .+...+++||.+|+.+||... ..|. +.++++++.-++
T Consensus 343 ---------------~~p--~~~~~~~~aL~f~~~~Aa~rA-~~G~---i~~~~d~~~~l~ 382 (446)
T TIGR02045 343 ---------------DNP--LSEEELRRSLEFSTILAATRA-SLGN---IENPDDAEAGLE 382 (446)
T ss_pred ---------------CCC--CCHHHHHHHHHHHHHHHHHHH-hcCC---CCCHHHHHHHhc
Confidence 100 112238999999999998776 5563 457777766544
|
Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases. |
| >PRK14038 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0043 Score=62.41 Aligned_cols=149 Identities=19% Similarity=0.223 Sum_probs=92.2
Q ss_pred hhcCCccEEEEccccccCchhH-H---HHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhH
Q 015777 201 SLITKAKIFHYGSISLITEPCK-S---AHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEE 276 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~-~---~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E 276 (400)
++....|.++++|+.++.+... + ...+.++..++.++++.++.... . ....+..+.++++.+|-+-+||.|
T Consensus 220 ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~----~-d~~~r~~i~~ilp~vDSlGmNE~E 294 (453)
T PRK14038 220 EIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFT----P-DETVREEILGLLGKFYSVGLNEVE 294 (453)
T ss_pred hhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeecc----c-hHHHHHHHHhhCccccccccCHHH
Confidence 4556899999999876554322 2 22233444455688999998632 2 234566666799999999999999
Q ss_pred HhcccCCCCC-------------cH---HHHHHHHHh-CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHH
Q 015777 277 ISFLTQGEDP-------------YD---DAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDA 339 (400)
Q Consensus 277 ~~~l~~~~~~-------------~~---~~~~~~l~~-~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDa 339 (400)
+..+...-.. .. .+++.+|++ .|.+.+.|-. .+-+++ +..+
T Consensus 295 La~ll~~lg~~~l~~~i~~~~~~~~~~v~e~~~~L~~~~gleri~vHT--~~y~l~-------i~~~------------- 352 (453)
T PRK14038 295 LASIMEVMGEKTLAEKLLAKDPVDPIAVTEAMLKLAEKTGVKRIHFHT--YGYYLA-------LTKY------------- 352 (453)
T ss_pred HHHHHHHhccchhhhhhhhcCccCHHHHHHHHHHHHHHcCCCEEEEEe--cceeEE-------EecC-------------
Confidence 9988741110 11 233445554 4776655431 111111 1010
Q ss_pred HHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 340 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 340 F~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++.. +++||.+|..+||.... .|. +.+++++++.++-
T Consensus 353 ----------~~~~-------~~~aL~f~~~~AaarA~-~G~---i~~~~d~~~~l~v 389 (453)
T PRK14038 353 ----------RGEH-------VRDALLFAALAAAAKAM-LGN---IEKIDDVRKALDV 389 (453)
T ss_pred ----------CHHH-------HHHHHHHHHHHHHHHHH-cCC---CCCHHHHHHHhcC
Confidence 3334 99999999999998874 664 4678888776653
|
|
| >PRK10565 putative carbohydrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.003 Score=65.43 Aligned_cols=146 Identities=12% Similarity=-0.004 Sum_probs=87.6
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh--hhccCcEEEcCHhHHhc
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS--IWETADIIKISEEEISF 279 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~--ll~~~dvl~~N~~E~~~ 279 (400)
.++.++.+.++.-.... . ...++++.+++.++++++|+.. ...+.. ......|++||..|+..
T Consensus 317 ~~~~~~a~viGpGlg~~---~-~~~~~~~~~~~~~~P~VLDAda-----------L~ll~~~~~~~~~~VLTPh~gE~~r 381 (508)
T PRK10565 317 SLEWADVVVIGPGLGQQ---E-WGKKALQKVENFRKPMLWDADA-----------LNLLAINPDKRHNRVITPHPGEAAR 381 (508)
T ss_pred HhhcCCEEEEeCCCCCC---H-HHHHHHHHHHhcCCCEEEEchH-----------HHHHhhCccccCCeEECCCHHHHHH
Confidence 34667888776432222 2 2244456677788999999852 111111 01125799999999999
Q ss_pred ccCCCCCc----HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccc
Q 015777 280 LTQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLL 355 (400)
Q Consensus 280 l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~ 355 (400)
|++..... ..+.++++.++....|++ .|..- ++.+.++..++...--...-++|.||++.|.+.+.+.++.+
T Consensus 382 L~~~~~~~v~~~~~~~a~~~a~~~~~~vvl-KG~~~-iI~~~~~~~~~~~~G~~~ma~~GsGDvLaGiIaalla~g~~-- 457 (508)
T PRK10565 382 LLGCSVAEIESDRLLSARRLVKRYGGVVVL-KGAGT-VIAAEPDALAIIDVGNAGMASGGMGDVLSGIIGALLGQKLS-- 457 (508)
T ss_pred HhCCChhhhhhhHHHHHHHHHHHhCCEEEE-eCCCc-EEEcCCceEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC--
Confidence 99854322 123445555544344555 45533 44443333333332234455699999999988888888888
Q ss_pred cchHHHHHHHHHHHHH
Q 015777 356 QKEDQLRDALRFANAC 371 (400)
Q Consensus 356 ~~~~~l~~al~~A~a~ 371 (400)
+.+|+..|+..
T Consensus 458 -----~~~Aa~~a~~l 468 (508)
T PRK10565 458 -----PYDAACAGCVA 468 (508)
T ss_pred -----HHHHHHHHHHH
Confidence 78888877743
|
|
| >COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0089 Score=55.42 Aligned_cols=159 Identities=16% Similarity=0.043 Sum_probs=89.3
Q ss_pred CCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-
Q 015777 187 PSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE- 265 (400)
Q Consensus 187 ~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~- 265 (400)
.++-|...+++.. ++.+-++.+.+.--. ......+.+..+.+.+++.|.|+++||..... ...-++...+++.
T Consensus 38 aSP~Ma~~~eE~~-e~~kia~AL~INIGT-L~~~~~~~m~~A~~~An~~~~PvvLDPVgvgA----t~~R~~~~~~LL~~ 111 (265)
T COG2145 38 ASPVMADAPEEVE-EFAKIADALLINIGT-LSAERIQAMRAAIKAANESGKPVVLDPVGVGA----TKFRTKFALELLAE 111 (265)
T ss_pred CCchhccCHHHHH-HHHHhccceEEeecc-CChHHHHHHHHHHHHHHhcCCCEEecCccCCc----hHHHHHHHHHHHHh
Confidence 3444444555543 454555555432211 23344677888899999999999999964322 1112334445555
Q ss_pred -cCcEEEcCHhHHhcccCCCCC--------cH---HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCC
Q 015777 266 -TADIIKISEEEISFLTQGEDP--------YD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDA 333 (400)
Q Consensus 266 -~~dvl~~N~~E~~~l~~~~~~--------~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDt 333 (400)
+.++++.|..|...|.|.... .. .+.++.+.... ..+++-.|+.-. +.++++.+.+.--.--.-.-
T Consensus 112 ~~~~~IrGN~sEI~~Lag~~~~~kGVDa~~~~~~~~~~a~~~A~~~-~~vvvvTG~vD~-Isdg~~~~~i~nG~pll~~I 189 (265)
T COG2145 112 VKPAAIRGNASEIAALAGEAGGGKGVDAGDGAADAIEAAKKAAQKY-GTVVVVTGEVDY-ISDGTRVVVIHNGSPLLGKI 189 (265)
T ss_pred cCCcEEeccHHHHHHHhcccccccccccccchhhHHHHHHHHHHHh-CcEEEEECCeeE-EEcCCeEEEEECCCcHHhhh
Confidence 479999999999999854321 11 12233333322 244444466443 23444444443332234455
Q ss_pred CCchHHHHHHHHHHHHcCCc
Q 015777 334 TGAGDAFVAGILSQLSTDFS 353 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~ 353 (400)
||+|+...|-..+.+....+
T Consensus 190 tGtGCllgav~aaF~av~~d 209 (265)
T COG2145 190 TGTGCLLGAVVAAFLAVEKD 209 (265)
T ss_pred hccccHHHHHHHHHHhcCCC
Confidence 99998876666555555554
|
|
| >PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0025 Score=64.74 Aligned_cols=78 Identities=13% Similarity=0.194 Sum_probs=49.7
Q ss_pred hhcCCccEEEEccccccCc-----hh----HHHHHHHHHHHh-hCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 201 SLITKAKIFHYGSISLITE-----PC----KSAHIAAAKAAK-DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~-----~~----~~~~~~~~~~a~-~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
+...+.|.++++|+.++.+ .. .+.+.+.++..+ ..++++.++... +.+.+-.+..+..+++++|.+
T Consensus 205 ~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~l~~~~~~~iH~E~As----~~d~~l~~~i~~~ilp~vDSl 280 (444)
T PF04587_consen 205 EIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKLLKSNPDIPIHLELAS----FADEELRKEILEKILPHVDSL 280 (444)
T ss_dssp HHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHHHH-HTT-EEEEE--------SSHHHHHHHHHHHGGGSSEE
T ss_pred hhccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHhccCCCCCceEEEecc----ccCHHHHHHHHHHhhcccccc
Confidence 3456799999999987653 11 222333344555 688999999864 345666667777899999999
Q ss_pred EcCHhHHhcccC
Q 015777 271 KISEEEISFLTQ 282 (400)
Q Consensus 271 ~~N~~E~~~l~~ 282 (400)
-+||.|+..+..
T Consensus 281 GmNEqEL~~l~~ 292 (444)
T PF04587_consen 281 GMNEQELANLLS 292 (444)
T ss_dssp EEEHHHHHHHHH
T ss_pred ccCHHHHHHHHH
Confidence 999999998753
|
ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A. |
| >PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.011 Score=55.34 Aligned_cols=169 Identities=12% Similarity=0.025 Sum_probs=100.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh---hhccCcEEEcCHhHH
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS---IWETADIIKISEEEI 277 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~---ll~~~dvl~~N~~E~ 277 (400)
+.++++|.+.++.- +... . ...++++...+...++++|.. . ...+.. .....-|++|+..|+
T Consensus 63 ~~~~~~~av~iGPG-lg~~--~-~~~~~~~~~~~~~~p~VlDAD----------a-L~~l~~~~~~~~~~~IlTPH~gE~ 127 (242)
T PF01256_consen 63 ELLEKADAVVIGPG-LGRD--E-ETEELLEELLESDKPLVLDAD----------A-LNLLAENPKKRNAPVILTPHPGEF 127 (242)
T ss_dssp HHHCH-SEEEE-TT--SSS--H-HHHHHHHHHHHHCSTEEEECH----------H-HHCHHHCCCCSSSCEEEE-BHHHH
T ss_pred hhhccCCEEEeecC-CCCc--h-hhHHHHHHHHhhcceEEEehH----------H-HHHHHhccccCCCCEEECCCHHHH
Confidence 45678999988753 2222 1 223355555566778999963 1 122222 345678999999999
Q ss_pred hcccCCCCC---cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 278 SFLTQGEDP---YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 278 ~~l~~~~~~---~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
..|++.... +..+.++++.+..- .+++=.|..-.++..+++.+..+.- -.-.-+-|.||.+.+-+..-+.++.+
T Consensus 128 ~rL~~~~~~~~~~~~~~a~~~a~~~~-~~vvLKG~~t~I~~p~~~~~~n~~g-n~~la~gGsGDvLaGii~~llaq~~~- 204 (242)
T PF01256_consen 128 ARLLGKSVEIQEDRIEAAREFAKEYG-AVVVLKGAVTIIASPGGRVYVNPTG-NPGLATGGSGDVLAGIIAGLLAQGYD- 204 (242)
T ss_dssp HHHHTTTCHHCCSHHHHHHHHHHHHT-SEEEEESTSSEEEEETSEEEEE-----GGGSSTTHHHHHHHHHHHHHHHTSS-
T ss_pred HHHhCCcccchhhHHHHHHHHHhhcC-cEEEEeCCCcEEEecCcceeEeCCC-CCCCCCCCcccHHHHHHHHHHHccCC-
Confidence 999998762 33445555554322 2455557766665556666554433 24456789999999888888889998
Q ss_pred ccchHHHHHHHHHHHHH---HHHHhcccCCCCCCCCHHHHHHHH
Q 015777 355 LQKEDQLRDALRFANAC---GALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~---Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
+.+|+..|... |+..+...... ++ ...||-+.+
T Consensus 205 ------~~~Aa~~av~lHg~Ag~~~~~~~~~-~~-~a~dli~~i 240 (242)
T PF01256_consen 205 ------PFEAACLAVYLHGRAGDLAAEKYGR-GM-LASDLIDNI 240 (242)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHCTTCSS-C---HHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHhCCC-cC-cHHHHHHhc
Confidence 88888887643 33333333322 33 566776655
|
Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A .... |
| >KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.014 Score=53.93 Aligned_cols=141 Identities=12% Similarity=0.076 Sum_probs=88.9
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 200 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 200 ~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.++++-..++++.-.-.++.....+..++++++++++|+++|... +|--.+.....+.. . ..-|+.||.-|+..
T Consensus 96 ~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaDG---L~Lv~q~~e~l~~~-~-~~viLTPNvvEFkR 170 (306)
T KOG3974|consen 96 EKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDADG---LWLVEQLPERLIGG-Y-PKVILTPNVVEFKR 170 (306)
T ss_pred HHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCc---eEehhhchhhhhcc-C-ceeeeCCcHHHHHH
Confidence 3567788888887644345556777889999999999999999852 34211111111111 1 23578999999999
Q ss_pred ccCC--CCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHH
Q 015777 280 LTQG--EDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 280 l~~~--~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
|++. ...+....+..|...-....++-.|+.-.++..+.+....+. .-...-.-|-||...+.+..
T Consensus 171 Lcd~~l~~~d~~~~~~~L~~~l~nv~vvqKG~~D~ils~~~ev~~~s~-eGs~kRcGGQGDiLaGsla~ 238 (306)
T KOG3974|consen 171 LCDAELDKVDSHSQMQHLAAELMNVTVVQKGESDKILSPDSEVRVCST-EGSLKRCGGQGDILAGSLAT 238 (306)
T ss_pred HHHHhhccccchHHHHHHHHHhcCeEEEEecCCceeeCCCCeeEEccC-CCCccccCCCcchhhhHHHH
Confidence 9987 333333444555544455677777887765554444433332 23344557899998876543
|
|
| >cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0097 Score=60.25 Aligned_cols=163 Identities=12% Similarity=0.125 Sum_probs=91.1
Q ss_pred ceecCCChHHHHHHHHHHcCC-CceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCc
Q 015777 88 FKKAPGGAPANVAVGIARLGG-SSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGART 166 (400)
Q Consensus 88 ~~~~~GG~~~N~A~~larLG~-~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t 166 (400)
...+.||.+.-+|..++++|. +|.+.+. +... .....+.+.+|-.-...- .....
T Consensus 101 ~~~~mGGnAgimAn~la~~g~~~Vil~~p-------------------~~~k----~~~~L~~d~~i~~p~~e~-~~~~d 156 (445)
T cd01938 101 DELRMGGNAGLMANRLAGEGDLKVLLGVP-------------------QSSK----LQAELFLDGPIVVPTFEN-LIEED 156 (445)
T ss_pred ceEEeCChHHHHHHHHHhcCCceEEEecC-------------------CCcH----HHHHhCCCCCeeeccccc-CCCCC
Confidence 468999999999999999999 7666665 3332 112222211221110000 01122
Q ss_pred eEEEEEEcCCCC----------eeEEEe-cCCCccccCCccccchhhcCC-ccEEEEccccccCchh--HHHHHHH----
Q 015777 167 ALAFVTLRSDGE----------REFMFY-RNPSADMLLQEAELDLSLITK-AKIFHYGSISLITEPC--KSAHIAA---- 228 (400)
Q Consensus 167 ~~~~i~~~~~g~----------r~~~~~-~~~~~~~~l~~~~l~~~~i~~-~~~v~~~~~~~~~~~~--~~~~~~~---- 228 (400)
-..+|+-.+.|+ ++|++. +..+. . ...+++..++.+. .|.++++|+-++.+.. ..+..+.
T Consensus 157 ~IHlIlEy~~G~~~~~~~aPraNRfI~~~d~~n~-l-~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~ 234 (445)
T cd01938 157 EIHLILEYPRGESWGDFVAPRANRFIFHDDDNNP-M-LMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERV 234 (445)
T ss_pred ccEEEEEcCCCCEecceEcCCCCeEEEecCCcch-h-hhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHH
Confidence 233333223333 233333 22222 2 2223333345554 8999999987654421 1122222
Q ss_pred ---HHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 229 ---AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 229 ---~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
++..+ ..+++.++... +.+.+-..+.+..+++++|-+-+||.|+..+.
T Consensus 235 ~~~l~~l~-~~i~iH~E~As----~~d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~ 285 (445)
T cd01938 235 KSILEILP-PLIPIHLELAS----TVDEELREEILHEVVPYVDSLGLNEQELANLL 285 (445)
T ss_pred HHHHHhcc-ccCcEEEEecc----cccHHHHHHHHHHhcccccccccCHHHHHHHH
Confidence 22222 34889998864 34566667777789999999999999998886
|
ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers. |
| >COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.11 Score=49.57 Aligned_cols=174 Identities=13% Similarity=0.026 Sum_probs=90.9
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~ 278 (400)
...+++|.+.++.-.-..+-..+.+.++ -+.. +++++|...- ........+.. .--|+.|+..|++
T Consensus 97 ~~~~~~~avviGpGlG~~~~~~~~~~~~----l~~~~~p~ViDADaL--------~~la~~~~~~~~~~~VlTPH~gEf~ 164 (284)
T COG0063 97 ELVERADAVVIGPGLGRDAEGQEALKEL----LSSDLKPLVLDADAL--------NLLAELPDLLDERKVVLTPHPGEFA 164 (284)
T ss_pred hhhccCCEEEECCCCCCCHHHHHHHHHH----HhccCCCEEEeCcHH--------HHHHhCcccccCCcEEECCCHHHHH
Confidence 3456788888874222222223333333 3333 8999997420 11111112222 2378899999999
Q ss_pred cccCCCCCc----HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 279 FLTQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 279 ~l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
.|++...++ ..+.++.+.++. ..+||=.|..-.+...+++.+..+.- -.-.-+=|.||+..+-+.+-|.++ ..
T Consensus 165 rL~g~~~~~~~~~r~~~a~~~a~~~-~~vvVLKG~~tvI~~~~g~~~~n~~G-~~~ma~GGtGDvLaGii~alLAq~-~~ 241 (284)
T COG0063 165 RLLGTEVDEIEVDRLEAARELAAKY-GAVVVLKGAVTVIADPDGEVFVNPTG-NPGMATGGTGDVLAGIIGALLAQG-PA 241 (284)
T ss_pred HhcCCcccccccchHHHHHHHHHHc-CCEEEEeCCCCEEEcCCCcEEEcCCC-CHHhccCcchHHHHHHHHHHHhCC-CC
Confidence 999854332 234455555443 33455556655544433344333221 123345699999877655555666 30
Q ss_pred ccchHHHHHHHHHHHH---HHH-HHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 355 LQKEDQLRDALRFANA---CGA-LTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a---~Aa-~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++.+|+..|+. .|+ +.-...| + .+..|+.+.+.++
T Consensus 242 -----~~~~Aa~~g~~~h~~ag~la~~~~g---~-~~a~Dl~~~ip~~ 280 (284)
T COG0063 242 -----DPLEAAAAGAWLHGRAGELAAKKHG---G-LTATDLIEAIPRA 280 (284)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHhhccC---C-CCHHHHHHHHHHH
Confidence 25566655543 333 3333334 2 4667777766554
|
|
| >PRK10076 pyruvate formate lyase II activase; Provisional | Back alignment and domain information |
|---|
Probab=85.71 E-value=5.1 Score=36.62 Aligned_cols=75 Identities=9% Similarity=0.033 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE-----cCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-----ISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~-----~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
.+.+.++++.+++.|+.+.+|.+...+ .+.+.++++.+|.+. ++.+..+.++|......-+.++.+.
T Consensus 53 ~~fl~~l~~~~k~~gi~~~leTnG~~~--------~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG~~~~~il~nl~~l~ 124 (213)
T PRK10076 53 AEFATRFLQRLRLWGVSCAIETAGDAP--------ASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLV 124 (213)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC--------HHHHHHHHHhcCEEEEeeccCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 456778999999999999999986433 234455566666554 4677777888876543334456666
Q ss_pred hCCCcEEE
Q 015777 297 HANLKLLL 304 (400)
Q Consensus 297 ~~g~~~vv 304 (400)
+.|....+
T Consensus 125 ~~g~~v~i 132 (213)
T PRK10076 125 SEGVNVIP 132 (213)
T ss_pred hCCCcEEE
Confidence 77765443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 400 | ||||
| 3ljs_A | 338 | Crystal Structure Of Fructokinase From Xylella Fast | 4e-34 | ||
| 1tz6_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 8e-25 | ||
| 1tyy_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 1e-23 | ||
| 3hj6_A | 327 | Structure Of Halothermothrix Orenii Fructokinase (F | 6e-23 | ||
| 3iq0_A | 330 | Crystal Structure Of A Putative Ribokinase Ii In Co | 4e-20 | ||
| 3ewm_A | 313 | Crystal Structure Of An Uncharacterized Sugar Kinas | 1e-16 | ||
| 2dcn_A | 311 | Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase | 2e-16 | ||
| 3gbu_A | 313 | Crystal Structure Of An Uncharacterized Sugar Kinas | 3e-15 | ||
| 4du5_A | 336 | Crystal Structure Of Pfkb Protein From Polaromonas | 2e-14 | ||
| 3pl2_A | 319 | Crystal Structure Of A 5-Keto-2-Deoxygluconokinase | 6e-12 | ||
| 2v78_A | 313 | Crystal Structure Of Sulfolobus Solfataricus 2-Keto | 1e-11 | ||
| 3ry7_A | 304 | Crystal Sructure Of Sa239 Length = 304 | 2e-11 | ||
| 1v19_A | 309 | 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop | 7e-11 | ||
| 4e69_A | 328 | Crystal Structure Of A Sugar Kinase (Target Efi-502 | 1e-10 | ||
| 2qcv_A | 332 | Crystal Structure Of A Putative 5-Dehydro-2-Deoxygl | 2e-10 | ||
| 3h49_A | 325 | Crystal Structure Of A Putative Ribokinase (Apo For | 4e-10 | ||
| 3lhx_A | 319 | Crystal Structure Of A Ketodeoxygluconokinase (Kdgk | 5e-08 | ||
| 2qhp_A | 296 | Crystal Structure Of Fructokinase (Np_810670.1) Fro | 8e-06 | ||
| 3b1n_A | 326 | Structure Of Burkholderia Thailandensis Nucleoside | 2e-05 | ||
| 3b1r_A | 320 | Structure Of Burkholderia Thailandensis Nucleoside | 2e-05 | ||
| 2fv7_A | 331 | Crystal Structure Of Human Ribokinase Length = 331 | 1e-04 | ||
| 1rk2_A | 309 | E. Coli Ribokinase Complexed With Ribose And Adp, S | 2e-04 | ||
| 1vm7_A | 311 | Crystal Structure Of Ribokinase (Tm0960) From Therm | 2e-04 | ||
| 2c49_A | 302 | Crystal Structure Of Methanocaldococcus Jannaschii | 3e-04 | ||
| 2rbc_A | 343 | Crystal Structure Of A Putative Ribokinase From Agr | 7e-04 |
| >pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa Length = 338 | Back alignment and structure |
|
| >pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 | Back alignment and structure |
|
| >pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 | Back alignment and structure |
|
| >pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk) Length = 327 | Back alignment and structure |
|
| >pdb|3IQ0|A Chain A, Crystal Structure Of A Putative Ribokinase Ii In Complex With Atp And Mg+2 From E.Coli Length = 330 | Back alignment and structure |
|
| >pdb|3EWM|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii Length = 313 | Back alignment and structure |
|
| >pdb|2DCN|A Chain A, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From Sulfolobus Tokodaii Complexed With 2-Keto-6-Phosphogluconate (Alpha-Furanose Form) Length = 311 | Back alignment and structure |
|
| >pdb|3GBU|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii In Complex With Atp Length = 313 | Back alignment and structure |
|
| >pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 | Back alignment and structure |
|
| >pdb|3PL2|A Chain A, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase (Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.89 A Resolution Length = 319 | Back alignment and structure |
|
| >pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3- Deoxygluconate Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3RY7|A Chain A, Crystal Sructure Of Sa239 Length = 304 | Back alignment and structure |
|
| >pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 | Back alignment and structure |
|
| >pdb|4E69|A Chain A, Crystal Structure Of A Sugar Kinase (Target Efi-502132) From Oceanicola Granulosus, Unliganded Structure Length = 328 | Back alignment and structure |
|
| >pdb|2QCV|A Chain A, Crystal Structure Of A Putative 5-Dehydro-2-Deoxygluconokinase (Iolc) From Bacillus Halodurans C-125 At 1.90 A Resolution Length = 332 | Back alignment and structure |
|
| >pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 | Back alignment and structure |
|
| >pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 | Back alignment and structure |
|
| >pdb|2QHP|A Chain A, Crystal Structure Of Fructokinase (Np_810670.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A Resolution Length = 296 | Back alignment and structure |
|
| >pdb|3B1N|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) In Complex With Adp-Mizoribine Length = 326 | Back alignment and structure |
|
| >pdb|3B1R|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) In Complex With Amp-Mg-Amp Length = 320 | Back alignment and structure |
|
| >pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 | Back alignment and structure |
|
| >pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 | Back alignment and structure |
|
| >pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 | Back alignment and structure |
|
| >pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 | Back alignment and structure |
|
| >pdb|2RBC|A Chain A, Crystal Structure Of A Putative Ribokinase From Agrobacterium Tumefaciens Length = 343 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 400 | |||
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 1e-151 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 1e-147 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 1e-145 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 1e-144 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 1e-144 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 1e-143 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 1e-135 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 1e-133 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 1e-129 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 1e-127 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 1e-125 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 1e-125 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 1e-125 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 1e-117 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 1e-114 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 8e-94 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 8e-88 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 2e-61 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 4e-56 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 2e-53 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 7e-50 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 6e-49 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 8e-48 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 1e-47 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 1e-46 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 1e-44 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 2e-44 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 3e-44 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 1e-41 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 2e-41 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 3e-41 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 1e-40 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 8e-39 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 1e-32 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 3e-27 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 4e-27 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 8e-27 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 8e-26 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 2e-16 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 8e-16 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 8e-16 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 1e-15 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 3e-15 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 7e-15 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 3e-12 |
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 | Back alignment and structure |
|---|
Score = 430 bits (1107), Expect = e-151
Identities = 114/345 (33%), Positives = 163/345 (47%), Gaps = 27/345 (7%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
++CFGE LID + AF + GGAPANVAV +ARLGG+ F+G
Sbjct: 4 KKTILCFGEALIDMLAQPLV-KKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGM---- 58
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER 179
+G+D FG L D E V G+ A+TALAFV L + GER
Sbjct: 59 ---------------LGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGER 103
Query: 180 EFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 239
F FYR P+AD+L + + + A IFH S S+ + A+ AG ++
Sbjct: 104 SFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIV 163
Query: 240 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299
S+D N R LWP+ + + AD++K+S EE+ +L +AV+ +L+
Sbjct: 164 SFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGR 223
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS-------TDF 352
+LLLVT+ +YT+ G V +V+ D+ AGDAFV G+L +
Sbjct: 224 AQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALI 283
Query: 353 SLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397
+ + LRFA A GAL V +GA A+P VL+ I
Sbjct: 284 DFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSEVLSLIQE 328
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 | Back alignment and structure |
|---|
Score = 418 bits (1078), Expect = e-147
Identities = 85/345 (24%), Positives = 143/345 (41%), Gaps = 30/345 (8%)
Query: 56 ETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGK 115
+ V+ G + +D P SG+ LA+ +F K GG+ ANV+V AR G +SA +
Sbjct: 4 NLTSTHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLS- 62
Query: 116 TTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRS 175
+VG D FG L L+ V+ + D +T + F +
Sbjct: 63 ------------------RVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFP 104
Query: 176 DGEREFMFYRNPSA-DMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 234
+ FYR P A D+ ++ A++ L + +A I + EP + H +
Sbjct: 105 PDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTH-REILTTRA 163
Query: 235 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYK 294
+D + R W S ++A + + + + ++EE +P +
Sbjct: 164 NRRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETEP--ERAGRA 221
Query: 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354
L ++L +V +GP G TKD + V V+ ++ GAGDAF + L +++
Sbjct: 222 LLERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP- 280
Query: 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAPV 399
L LRFAN GAL A+PT + V +++ V
Sbjct: 281 ------LEKVLRFANTAGALVASRLECSTAMPTTDEVEASLNQKV 319
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 | Back alignment and structure |
|---|
Score = 415 bits (1070), Expect = e-145
Identities = 89/334 (26%), Positives = 135/334 (40%), Gaps = 30/334 (8%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAF-KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCF 121
V GE+L++ + + G + + P GAPA + RLG I
Sbjct: 6 VFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISC------ 59
Query: 122 YEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREF 181
VG D FG + L + V+ G+ P T AFVT + G+R+F
Sbjct: 60 -------------VGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDF 106
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241
+F +A L +D +++ FH SL + A A K G V+S+
Sbjct: 107 IFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISF 166
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
DPN+R + + R+ + + E DI SE E+ L+ P + + +K
Sbjct: 167 DPNIRKEMLDIPE-MRDALHFVLELTDIYMPSEGEVLLLSPHSTP--ERAIAGFLEEGVK 223
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
++V G G YY+ + V+ VE VD TGAGD F ++ F
Sbjct: 224 EVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------A 276
Query: 362 RDALRFANACGALTVMERGAIPALPTREAVLNAI 395
AL++ANACGAL V RG + + I
Sbjct: 277 HRALQYANACGALAVTRRGPMEGTSRLMEIETFI 310
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 | Back alignment and structure |
|---|
Score = 412 bits (1061), Expect = e-144
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 29/336 (8%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
++ G ID + E+ F K GG+PAN+ +G ++LG + FIGK
Sbjct: 14 LIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGK------- 66
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDP-GARTALAFVTLRSDGEREF 181
+ D+ G + ++ V+ + + D G +T LAF ++S E
Sbjct: 67 ------------IADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSI 114
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241
+ YR AD+ L E++ + I ++K+ +L P + A + A + AK V + +
Sbjct: 115 LMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVF 174
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD-DAVVYKLFHANL 300
+ + R W + ++ + E +DI+ + EE L + D D + LF +
Sbjct: 175 ELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSP 234
Query: 301 KLLLVTEGPDGCRYYTKDFSG-RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
+L+++ G +G YTK R K + + GAGD++ + L L+ +
Sbjct: 235 ELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYA------LISGKG 288
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+ AL++ +A ++ V + + A+P+ E + I
Sbjct: 289 -IETALKYGSASASIVVSKHSSSDAMPSVEEIEALI 323
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 | Back alignment and structure |
|---|
Score = 411 bits (1060), Expect = e-144
Identities = 93/333 (27%), Positives = 155/333 (46%), Gaps = 31/333 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
VV GE+L+D + T SL++S + + GG+PAN+AV ++RLG A I +
Sbjct: 24 VVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISR------- 76
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
+GAD FG L D+LK + G++ D RT + +V S R
Sbjct: 77 ------------LGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYV---SKSTRTPD 121
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242
+ ADM LQE ++ LI ++K+FH + L +P + I A A++ G ++ +D
Sbjct: 122 WLPYREADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFD 181
Query: 243 PNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKL 302
P R LWP D + I AD +K S ++ L + P + V + +K
Sbjct: 182 PCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSP--ENYVKRYLELGVKA 239
Query: 303 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362
+++T G +G + R+ +AVD TGAGDAF +G + L ++
Sbjct: 240 VILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLL-------DGYTVK 292
Query: 363 DALRFANACGALTVMERGAIPALPTREAVLNAI 395
+++ N A + GA+ +P++E ++
Sbjct: 293 RSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEY 325
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 | Back alignment and structure |
|---|
Score = 411 bits (1058), Expect = e-143
Identities = 100/349 (28%), Positives = 155/349 (44%), Gaps = 32/349 (9%)
Query: 47 PGDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL 106
+ + V G+ +D VP + ++ K PGGA ANV V +ARL
Sbjct: 11 SSGLVPRGSHMKAMNKVWVIGDASVDLVPE-------KQNSYLKCPGGASANVGVCVARL 63
Query: 107 GGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGART 166
GG FIG +G D+ G L + ++N V+ +R D +
Sbjct: 64 GGECGFIGC-------------------LGDDDAGRFLRQVFQDNGVDVTFLRLDADLTS 104
Query: 167 ALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHI 226
A+ V L +DGER F + +P AD + +L + + F++ SI L P + A +
Sbjct: 105 AVLIVNLTADGERSFTYLVHPGADTYVSPQDLPP--FRQYEWFYFSSIGLTDRPAREACL 162
Query: 227 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP 286
A+ ++AG + +D NLR +W + D+ E I A I K+S +E+ L+
Sbjct: 163 EGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW 222
Query: 287 YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346
Y L +++ G DG T + +V+ VD TGAGDAFV G+L
Sbjct: 223 --QDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLF 280
Query: 347 QLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
LS L +A+ ANACGA+ V +GA+ ALP + + +
Sbjct: 281 TLSRANCW--DHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFL 327
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 | Back alignment and structure |
|---|
Score = 388 bits (1000), Expect = e-135
Identities = 102/338 (30%), Positives = 157/338 (46%), Gaps = 40/338 (11%)
Query: 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFC 120
L+ GE+LID + G L + F+K PGGAPANVAVG++RLG S+ I K
Sbjct: 2 SLIASIGELLIDLISVEEG-DLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISK----- 55
Query: 121 FYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGERE 180
VG D FG L + L + NV+ G+ D T + FV L+
Sbjct: 56 --------------VGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLK-GASPS 100
Query: 181 FMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLS 240
F+ Y + A + +++ ++ +AKI ++GS+ L P + + K K + ++ +
Sbjct: 101 FLLYDD-VAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIKGSSLI-A 158
Query: 241 YDPNLRLPLWPS-ADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299
+D NLRL LW ++ + + + ADI+K SEEE+ +L +
Sbjct: 159 FDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVEVKGS--------- 209
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
L +T GP GCR + V V +D TGAGDAF+A +L + K
Sbjct: 210 -MLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKL-----KGL 263
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397
L +FAN AL+ +RGA + P ++ +L A
Sbjct: 264 DLLKLGKFANLVAALSTQKRGAW-STPRKDELLKYKEA 300
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 | Back alignment and structure |
|---|
Score = 385 bits (991), Expect = e-133
Identities = 91/332 (27%), Positives = 138/332 (41%), Gaps = 32/332 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
V+ FGE ++ V G L + AF K GA NVA+G+ARLG + +
Sbjct: 29 VITFGEAMMLLVADRPG-PLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASR------- 80
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDG-EREF 181
+G D G L + ++ + + D +T F +DG +
Sbjct: 81 ------------LGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPV 128
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFH-YGSISLITEPCKSAHIAAAKAAKDAGVVLS 240
++R SA + A++D + + A+ H G I+ A + AG +S
Sbjct: 129 EYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVS 188
Query: 241 YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL 300
+DPNLR LW + + R+ I + AD + EE FLT P + V
Sbjct: 189 FDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTP--EGVARFYRQLGA 246
Query: 301 KLLLVTEGPDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
KL++V G +G + + SGRV G V E VD GAGD F G++S L
Sbjct: 247 KLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG------ 300
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAV 391
+ +A++ GA V G LPTR +
Sbjct: 301 -VPEAVKRGAWIGARAVQVLGDSEGLPTRAEL 331
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 | Back alignment and structure |
|---|
Score = 373 bits (960), Expect = e-129
Identities = 88/338 (26%), Positives = 137/338 (40%), Gaps = 38/338 (11%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
V+ GE LI F G L F+K G+ N + + R S + I +
Sbjct: 4 VIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIAR------- 55
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVT--LRSDGERE 180
VG DEFG + + + ++ + ++ D + T + F+ + E
Sbjct: 56 ------------VGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSE 103
Query: 181 FMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVL 239
++YR SA L +++ + + +++ H I+L I++ K A I A + AK
Sbjct: 104 LVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR---- 159
Query: 240 SYDPNLRLPLWPSADKAREGILSIWETADI--IKISEEEISFLTQGEDPYDDAVVYKLFH 297
S D N+R LW S +KA+E ILSI + DI + ++ L DP D K
Sbjct: 160 SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTDP--DEAYRKYKE 217
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357
+K+LL G G Y + KV D TGAGDA +S LQ
Sbjct: 218 LGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSL------YLQG 271
Query: 358 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+D + +L A L + RG PT E +
Sbjct: 272 KD-IEYSLAHGIAASTLVITVRGDNELTPTLEDAERFL 308
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 | Back alignment and structure |
|---|
Score = 367 bits (944), Expect = e-127
Identities = 76/337 (22%), Positives = 127/337 (37%), Gaps = 51/337 (15%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
+ ++V GE L D +P K GGAPAN A +++ G S +
Sbjct: 3 NNIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSA---- 46
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER 179
VG DE G + ++ KE + R D T VTL +G
Sbjct: 47 ---------------VGNDELGDEIMEVFKEKQLKNQIERVD--YPTGTVQVTLDDEGVP 89
Query: 180 EFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVV 238
+ + D + EL L + +GS++ E ++ D G +
Sbjct: 90 CYEIKEGVAWDNIPFTDELK-RLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQL 148
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED----PYDDAVVYK 294
+D NLR + +E + ++ +I+KI++EE+ +++ D
Sbjct: 149 KIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWIL 203
Query: 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354
L NLK+L++T G +G +T + KV D GAGD+F A + +
Sbjct: 204 LAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASIL----- 258
Query: 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 391
+ +A + A A + GA+P LP
Sbjct: 259 --NGKSVPEAHKLAVEVSAYVCTQSGAMPELPVILKD 293
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 | Back alignment and structure |
|---|
Score = 364 bits (936), Expect = e-125
Identities = 80/357 (22%), Positives = 139/357 (38%), Gaps = 44/357 (12%)
Query: 47 PGDGL---SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGI 103
G+ +E + ++ GE + + P ++ G N A +
Sbjct: 7 HSSGVDLGTENLYFQSMMHILSIGECMAELAPA------DLPGTYRLGFAGDTFNTAWYL 60
Query: 104 ARLGGSS--AFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFD 161
ARL S ++ +G D + + ++G G+R
Sbjct: 61 ARLRPESRISYFSA-------------------IGDDALSQQMRAAMSAAGIDGGGLRVI 101
Query: 162 PGARTALAFVTLRSDGEREFMFYRNPSAD-MLLQEAELDLSLITKAKIFHYGSISL--IT 218
PG L +TL GER F ++R SA L +A+ + + +A + ++ I+L +
Sbjct: 102 PGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILD 160
Query: 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEIS 278
+ ++ + A A+ G +++DPNLR LW + E I+ +DI S E+ +
Sbjct: 161 QCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEA 220
Query: 279 FLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAG 337
P DA + A ++ ++V GP + GRV V VD T AG
Sbjct: 221 AWFGDAGP--DATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAG 278
Query: 338 DAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 394
D+F AG+L + L A+ A A V +GA+ +P+ +A
Sbjct: 279 DSFNAGLLDSVLAGQP-------LETAIAAAAALAGQVVQGKGALVEVPSLRPHADA 328
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 | Back alignment and structure |
|---|
Score = 363 bits (933), Expect = e-125
Identities = 91/334 (27%), Positives = 126/334 (37%), Gaps = 37/334 (11%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
VV GE L+ VP G L + GGA NVAV +ARLG F+G+
Sbjct: 4 VVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGR------- 55
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
VG DE G M+ + L+ V+ R P T L G+
Sbjct: 56 ------------VGEDELGAMVEERLRAEGVDLTHFRRAP-GFTGLYLREYLPLGQGRVF 102
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEP-CKSAHIAAAKAAKDAGVVLSY 241
+YR SA L D + + H I+ P ++ + A + AK GV +S
Sbjct: 103 YYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSL 162
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
D N R LW + AR + D++ +SEEE L + L +
Sbjct: 163 DVNYRQTLWSPEE-ARGFLERALPGVDLLFLSEEEAELLFGRVEEA-------LRALSAP 214
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
+++ G G + VEAVD GAGDAF AG L+ +
Sbjct: 215 EVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------V 267
Query: 362 RDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+ LR AN GA RG P RE + +
Sbjct: 268 EERLRLANLLGASVAASRGDHEGAPYREDLEVLL 301
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 | Back alignment and structure |
|---|
Score = 362 bits (932), Expect = e-125
Identities = 88/338 (26%), Positives = 136/338 (40%), Gaps = 40/338 (11%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
++ GE+LI+F G L F+K G+ AN V + G I K
Sbjct: 4 LITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAK------- 55
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR--SDGERE 180
VG DEFGY + L+ V+ + M+ DP A T + F+ + E
Sbjct: 56 ------------VGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSE 103
Query: 181 FMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVL 239
++YR SA L ++D + A + H I+L I+ K A A + A +
Sbjct: 104 SIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR---- 159
Query: 240 SYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297
S+D N+RL LW + + A+ IL + + ++ + DP A K F
Sbjct: 160 SFDTNIRLKLWSAEE-AKREILKLLSKFHLKFLITDTDDSKIILGESDPDKAA---KAFS 215
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357
+++++ GP G Y G +V D TGAGDA LS +
Sbjct: 216 DYAEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSL------YYKG 269
Query: 358 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+ + AL +A L VM RG LPT + + +
Sbjct: 270 FE-MEKALDYAIVASTLNVMIRGDQENLPTTKDIETFL 306
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-117
Identities = 70/347 (20%), Positives = 132/347 (38%), Gaps = 52/347 (14%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA----FIGKTTL 118
+ GE +I+ + K+ GG N +V IAR +A ++
Sbjct: 7 IAVIGECMIELSE--------KGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTA--- 55
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
+G D F + D NV+ + + L ++ S GE
Sbjct: 56 ----------------LGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGE 99
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT-----EPCKSAHIAAAKAAK 233
R F ++RN +A +E ++ + F Y +S I+ + ++ + +
Sbjct: 100 RTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECR 159
Query: 234 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 293
G + +D N R LW S ++ ++ + E DI ++ ++ L + + V+
Sbjct: 160 AKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPV--EDVIA 217
Query: 294 KLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKV---EAVDATGAGDAFVAGILSQLS 349
+ +A +K ++V G D C V +K+ + +D T AGD+F AG L+
Sbjct: 218 RTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRL 277
Query: 350 TDFSLLQKEDQLRDALRFANACGALTVMERGAI---PALPTREAVLN 393
T S +A + + + + RGAI A+P +
Sbjct: 278 TGGS-------AENAAKRGHLTASTVIQYRGAIIPREAMPAEGHHHH 317
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 | Back alignment and structure |
|---|
Score = 336 bits (864), Expect = e-114
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 40/339 (11%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPA-----FKKAPGGAPANVAVGIARLGGSSAFIGKTT 117
V+C G ++D ++ + + GG N A I+RLG +A + +
Sbjct: 8 VICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSR-- 65
Query: 118 LFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDG 177
+G D G + D ++ N++ ++ D T++ + DG
Sbjct: 66 -----------------IGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDG 108
Query: 178 EREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 237
ER F+ R + L ++D + ++AK+ SI A AK +
Sbjct: 109 ERTFVTNR-NGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQM 167
Query: 238 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297
++ D + P ++ + I D + + E LT E D +
Sbjct: 168 IICAD-----MIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETL--DEIADCFLA 220
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQ 356
+K +++ G DGC D + +V + + A+D GAGD F +G ++ L +
Sbjct: 221 CGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN--- 277
Query: 357 KEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
LR+ RFANA A++V+ GA + R+ V +
Sbjct: 278 ----LRECARFANATAAISVLSVGATTGVKNRKLVEQLL 312
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 284 bits (729), Expect = 8e-94
Identities = 70/357 (19%), Positives = 127/357 (35%), Gaps = 54/357 (15%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
VV FGE+++ P + ++ +F GGA ANVA +A++G + F+ K
Sbjct: 15 VVTFGEIMLRLSPP-DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTK------- 66
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER-EF 181
+ + G A L++ V + G R + F+ + + +
Sbjct: 67 ------------LPNNPLGDAAAGHLRKFGVKTDYIARG-GNRIGIYFLEIGASQRPSKV 113
Query: 182 MFYRNPSADMLLQEAELDL-SLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVL 239
++ R SA + + D ++ A+ FH+ I+ + + A K A + GV +
Sbjct: 114 VYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTV 173
Query: 240 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA- 298
S D N R LW + A++ ++ E D++ +EE+I + D KL
Sbjct: 174 SCDLNYRARLWTKEE-AQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREA 232
Query: 299 ------------NLKLLLVT--------EGPDGCRYYTKDFSGRVQGLKVEAVDATGAGD 338
N K + +T + ++ VD GAGD
Sbjct: 233 YAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGD 292
Query: 339 AFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+F ++ F + FA A L G + + E +
Sbjct: 293 SFAGALIYGSLMGFD-------SQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLA 341
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 8e-88
Identities = 73/354 (20%), Positives = 129/354 (36%), Gaps = 50/354 (14%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
+ FGE+++ F P L L ++ + G N+ +A +A I
Sbjct: 5 IAAFGEVMLRFTP-PEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALIT-------- 55
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
K+ A+ G L++ ++ + G F + +
Sbjct: 56 -----------KLPANRLGEAGKAALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQV 103
Query: 183 FY--RNPSADMLLQEAELDL-SLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVV 238
Y R+ SA + + + D + + + + H ISL +TE + A + A+ A
Sbjct: 104 TYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKK 163
Query: 239 LSYDPNLRLPLWPS--ADKAREGILSIWETADIIKISEEEISFLTQGEDPYD-------- 288
+ +D N R L + A R+ I DI+ S ++ L D
Sbjct: 164 VCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQET 223
Query: 289 DAVVYKLFHANLKLLLVTEGPD-------GCRYYTKDFSGRVQGLKVEAVDATGAGDAFV 341
+ + + NL+ T YT++ + + + +D GAGDA+
Sbjct: 224 ELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYA 283
Query: 342 AGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
AGIL S ++S L A+ FA G L +G IP L T + V + +
Sbjct: 284 AGILYGYSQNWS-------LEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVL 329
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 2e-61
Identities = 76/338 (22%), Positives = 127/338 (37%), Gaps = 53/338 (15%)
Query: 63 VVCFGEMLIDFVPTVSGL-SLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
+ C G +D++ V S P+ +K GGA AN AVGI +LG +S +
Sbjct: 8 ITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSC--- 64
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
VG D LK ++N + + + T A++ D
Sbjct: 65 ----------------VGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNN 108
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 238
+ F A +E +I H I ++ AK A +
Sbjct: 109 QITFFL--WGAAKHYKELNPP---NFNTEIVH------IATGDPEFNLKCAKKAY-GNNL 156
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298
+S+DP LP + ++E +L I E + + +++ E + + D +
Sbjct: 157 VSFDPGQDLPQY-----SKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYL-----E 206
Query: 299 NLKLLLVTEGPDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQK 357
+ L+VT+G G YTKD + +K + +D TGAGD++ AG LS +
Sbjct: 207 RVDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD---- 262
Query: 358 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
L A + V +G LPT + V+ +
Sbjct: 263 ---LEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERL 297
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 4e-56
Identities = 53/326 (16%), Positives = 106/326 (32%), Gaps = 44/326 (13%)
Query: 63 VVCFGEMLIDFVPTVSGL----SLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
++C G +++D + V S + + GG +N ++ LG AF+G
Sbjct: 20 ILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMG---- 75
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTL-RSDG 177
+ + D L+ +V+ F +A V + + G
Sbjct: 76 ---------------SMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASG 120
Query: 178 EREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 237
R ++Y D + + + +T+ K H + + I A +
Sbjct: 121 SRTILYYDRSLPD--VSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPE- 177
Query: 238 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297
++ + +K RE + ++ D++ +S++ L + +
Sbjct: 178 -------QKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLG-FQSAEEALRGLYGRV 229
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQ--GLKVEAVDATGAGDAFVAGILSQLSTDFSLL 355
+L+ +G D VD GAGD F A ++ LS S
Sbjct: 230 RKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-- 287
Query: 356 QKEDQLRDALRFANACGALTVMERGA 381
+++ALRF +G
Sbjct: 288 -----VQEALRFGCQVAGKKCGLQGF 308
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 2e-53
Identities = 50/321 (15%), Positives = 101/321 (31%), Gaps = 47/321 (14%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSS-AFIGKTTLFCF 121
++ G + D + T G GG+ +A+ + +G
Sbjct: 5 LLVIGSLAFDDIETPFG-------RSDNTLGGSSTYIALSASYFTDEPIRMVGV------ 51
Query: 122 YEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREF 181
VG+D FG D+L N++ G++ +T D
Sbjct: 52 -------------VGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRD 97
Query: 182 MFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241
+ AE D + + + + I + + K
Sbjct: 98 TLDTQLNV-----FAEFDPHVPQYYRDSKFVCLGNIDPELQLKVLDQIDDPKLVVCD--- 149
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
+ + E + + D+ +++ E L+ + A + K
Sbjct: 150 ------TMNFWIEGKPEELKKVLARVDVFIVNDSEARLLSGDPNLVKTAR--IIREMGPK 201
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEA-VDATGAGDAFVAGILSQLSTDFSLLQKEDQ 360
L++ +G G +T + +E+ D TGAGD F G + L+ + E +
Sbjct: 202 TLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT--SEAE 259
Query: 361 LRDALRFANACGALTVMERGA 381
+R A+ + +A + V + G
Sbjct: 260 MRKAVLYGSAMASFCVEQFGP 280
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 7e-50
Identities = 63/348 (18%), Positives = 117/348 (33%), Gaps = 54/348 (15%)
Query: 58 RESPLVVCFGEMLIDFVPTVSGL-SLAES-PA-FKKAPGGAPANVAVGIARLGGSSAFIG 114
R+ P ++ FG ++D S P K + GG N+A +AR+G ++ F+
Sbjct: 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMS 63
Query: 115 KTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR 174
+G DE G + + K+ + G T L
Sbjct: 64 I-------------------LGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILD 104
Query: 175 SDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLI-TEPCKSAHIAAAKA 231
+GE + + + +D + A+ ++ ++ +
Sbjct: 105 ENGEMVSAIA-DMKSIGAMNTDFIDSKREIFENAEYT------VLDSDNPEIMEYLLKNF 157
Query: 232 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA- 290
+L DP SA+KA + + + IK + E L G D
Sbjct: 158 KDKTNFIL--DPV-------SAEKA-SWVKHLIKDFHTIKPNRHEAEILA-GFPITDTDD 206
Query: 291 ---VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347
+K + ++ DG Y G+++ +V+ + TGAGD+FVAG+
Sbjct: 207 LIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYG 266
Query: 348 LSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+ D ++FA +T+ I + VL +
Sbjct: 267 YMNKMP-------IEDIVKFAMTMSNITISHEETIHPDMALDTVLAKL 307
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 6e-49
Identities = 53/336 (15%), Positives = 92/336 (27%), Gaps = 60/336 (17%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
+ G + D + A GG A+ + LG + I
Sbjct: 14 ITFIGHVSKDVNVVDGK--------REIAYGGGVVMGAITSSLLGVKTKVIT-------- 57
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
K ++ L++N V + F RT SD +
Sbjct: 58 -----------KCTREDVSKF--SFLRDNGVE---VVFLKSPRTTSIENRYGSDPDTRES 101
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242
F + + + + + H + P + + LS D
Sbjct: 102 FLISAADPFTESDLAFI-----EGEAVHINPLWYGEFP-----EDLIPVLRRKVMFLSAD 151
Query: 243 PNLRLPLW---PSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299
+ + + E + D+ K+ E LT D + +
Sbjct: 152 AQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTNDLRESC--RIIRSFG 209
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
K++L T G + +F TG GD A L + K+
Sbjct: 210 AKIILATHA-SGVIVFDGNFY-EASFRSWSLEGRTGRGDTCTAAFLV------GFVFKKM 261
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+ A +FA A ++ + G P R L AI
Sbjct: 262 SIEKATKFAAAVTSVKMRHPG-----PLRREDLEAI 292
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 8e-48
Identities = 63/308 (20%), Positives = 110/308 (35%), Gaps = 48/308 (15%)
Query: 86 PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLA 145
P ++ GG N+A + LGG + +G +GA + L
Sbjct: 40 PTMRREFGGCAGNIAYALNLLGGDARMMG-------------------TLGAVDAQPYLD 80
Query: 146 DILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITK 205
+ ++ +R P +A A +T D + F+ P A M
Sbjct: 81 R-MDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAG------ 131
Query: 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE 265
++++ + + AGV +DP LPL R I E
Sbjct: 132 --EAKDIKLAIVGPDGFQGMVQHTEELAQAGVPFIFDPGQGLPL-FDGATLRRSI----E 184
Query: 266 TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQG 325
A I +++ E + +D + + ++ L++T G G +D + ++
Sbjct: 185 LATYIAVNDYEAKLVCDKTGWSEDEI-----ASRVQALIITRGEHGATIRHRDGTEQIPA 239
Query: 326 LKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 384
++ E +D TG GDAF G+L + F A R A+ GAL + +G
Sbjct: 240 VRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRLASLMGALKIAHQGPQTY 292
Query: 385 LPTREAVL 392
PTR +
Sbjct: 293 APTRAEID 300
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 1e-47
Identities = 72/341 (21%), Positives = 119/341 (34%), Gaps = 54/341 (15%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
V+C G ++D + V+ + + G ++ A + R+GG ++ G
Sbjct: 32 VLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGA--- 88
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
VG DE G + L E+ ++ +GM PGAR+AL+ + + + GE
Sbjct: 89 ----------------VGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGE 132
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGV 237
R + + + + ++ I + + E + A+ G
Sbjct: 133 RLIVPFYD--HRLHEKKRACTPEDIALFDAVL---VDVRWPELA----LDVLTVARALGK 183
Query: 238 VLSYDPNLRLPLWPSADKAREGIL-SIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296
D D A L + A I SE + LT G + D +
Sbjct: 184 PAILDG----------DVAPVETLEGLAPAATHIVFSEPAATRLT-GLETVKDMLPVLHA 232
Query: 297 HANLKLLLVTEGPDGCRYYTKDFSG--RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354
+ VT GP GC + D ++VEAVD AGD F ++
Sbjct: 233 RYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQS 292
Query: 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
R A+R ++ AL G PTRE A+
Sbjct: 293 -------RAAVRLSSVAAALKCTVFGGRIGAPTREETEEAM 326
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 1e-46
Identities = 67/311 (21%), Positives = 98/311 (31%), Gaps = 50/311 (16%)
Query: 86 PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLA 145
GG N+A I LGG A +G GAD Y
Sbjct: 50 DDLVMHRGGVAGNMAFAIGVLGGEVALVG-------------------AAGADFADYR-- 88
Query: 146 DILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLI 203
D LK VN + A TA T D + FY P A + +L +S I
Sbjct: 89 DWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFY--PGAMSEARNIKLADVVSAI 146
Query: 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI 263
K ++ G ++ + + G+ + DP+ +L E I +
Sbjct: 147 GKPELVIIG-----ANDPEAM-FLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRL 195
Query: 264 WETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSG-R 322
A + ++ E L + V A + L + T GP G D +
Sbjct: 196 VNGAAYLFTNDYEWDLLLSKTGWSEADV-----MAQIDLRVTTLGPKGVDLVEPDGTTIH 250
Query: 323 VQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381
V + D TG GDAF AG L+ S L + + + L + G
Sbjct: 251 VGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQLGSLVAVLVLESTGT 303
Query: 382 IPALPTREAVL 392
EA
Sbjct: 304 QEWQWDYEAAA 314
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 1e-44
Identities = 82/328 (25%), Positives = 128/328 (39%), Gaps = 60/328 (18%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135
TV+G ++ A GG AN AV R G + AFI
Sbjct: 30 TVTG------NHYQVAFGGKGANQAVAAGRSGANIAFIAC-------------------T 64
Query: 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE 195
G D G + L +N++ + G T +A + + +GE + A+ L
Sbjct: 65 GDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSP 122
Query: 196 AELD--LSLITKAKIFHYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWP 251
A ++ I A L+ E + +AAAK A +++ +P P
Sbjct: 123 ALVEAQRERIANASA-------LLMQLESPLESVMAAAKIAHQNKTIVALNPA------P 169
Query: 252 SADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA----VVYKLFHANLKLLLVTE 307
ARE + DII +E E LT G +D L ++ +L+T
Sbjct: 170 ----ARELPDELLALVDIITPNETEAEKLT-GIRVENDEDAAKAAQVLHEKGIRTVLITL 224
Query: 308 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367
G G RV G +V+AVD AGD F +++ L + L +A+RF
Sbjct: 225 GSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRF 277
Query: 368 ANACGALTVMERGAIPALPTREAVLNAI 395
A+A A+ V +GA P++P RE + +
Sbjct: 278 AHAAAAIAVTRKGAQPSVPWREEIDAFL 305
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 | Back alignment and structure |
|---|
Score = 154 bits (393), Expect = 2e-44
Identities = 78/329 (23%), Positives = 129/329 (39%), Gaps = 68/329 (20%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135
T+ A K GG AN A+ AR+ + FI K +
Sbjct: 28 TLHVEE-----AQKAFGGGKGANQAIATARMQADTTFITK-------------------I 63
Query: 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSAD 190
G D + + K +++ + + A+T AF+T+ ++G+ N A+
Sbjct: 64 GTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQ-------NTIYVYGGAN 116
Query: 191 MLLQEAELD--LSLITKAKIFHYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLR 246
M + ++ I A ++ E A I+A + AK GV +P
Sbjct: 117 MTMTPEDVINAKDAIINADF-------VVAQLEVPIPAIISAFEIAKAHGVTTVLNPA-- 167
Query: 247 LPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA----VVYKLFHANLKL 302
P A+ + DII +E E L+ G ++ +K
Sbjct: 168 ----P----AKALPNELLSLIDIIVPNETEAELLS-GIKVTNEQSMKDNANYFLSIGIKT 218
Query: 303 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362
+L+T G G + TK+ S ++ KV A+D T AGD F+ +S+L+ +D L
Sbjct: 219 VLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKS------QDNLA 272
Query: 363 DALRFANACGALTVMERGAIPALPTREAV 391
DA+ F N +LTV + GA ++P E V
Sbjct: 273 DAIDFGNKASSLTVQKHGAQASIPLLEEV 301
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 3e-44
Identities = 43/334 (12%), Positives = 88/334 (26%), Gaps = 70/334 (20%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
+ FG + ID + +V + S + GG N A+ +
Sbjct: 23 LAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYS----- 77
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER 179
VG LA ++ +N + + ++ ++
Sbjct: 78 --------------AVGMKTHREYLAM-IESMGINTGHVEKFEDESGPICYIAT-DGKKQ 121
Query: 180 EFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 239
++ A L + + H T P AK +
Sbjct: 122 VSFMHQGAM-------AAWAPQLADEYEYVH-----FSTGP------NYLDMAKSIRSKI 163
Query: 240 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ--GEDPYDDAVVYKLFH 297
+DP+ + + ++ + E + + ++ E + G +
Sbjct: 164 IFDPSQEIHKYS-----KDELKKFHEISYMSIFNDHEYRVFREMTGLSSPKVTTI----- 213
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357
VT G G + + D GAGD+F AG+ L S
Sbjct: 214 -------VTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS---- 261
Query: 358 EDQLRDALRFANACGALTVMERGAIPALPTREAV 391
+ + + + + G E +
Sbjct: 262 ---IEKGMIYGTIIAHHVI-DDGIENFSLNMEDL 291
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 1e-41
Identities = 67/343 (19%), Positives = 111/343 (32%), Gaps = 53/343 (15%)
Query: 63 VVCFGEMLIDFVPTVSGL-SLAES-PA-FKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119
++ G ID + + S P + + GG N A ++RLG I
Sbjct: 6 ILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIA----- 60
Query: 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER 179
G D G ++A+ ++ V F T L DG
Sbjct: 61 --------------PRGGDVTGEVVAEAARQAGVEDTPFTFLDRR-TPSYTAILERDGNL 105
Query: 180 EFMF-----YRNPSADMLLQEAELDLSLITKAKIFHYGSISLI-TEPCKSAHIAAAKAAK 233
Y+ + L A + I + L + A A+
Sbjct: 106 VIALADMDLYKLFTPRRLKVRAVRE--AIIASDFL------LCDANLPEDTLTALGLIAR 157
Query: 234 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 293
P + + P+ KA + + + DI+ ++E E LT
Sbjct: 158 ACEK-----PLAAIAISPA--KAVK-LKAALGDIDILFMNEAEARALTGETAENVRDWPN 209
Query: 294 KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ-GLKVEAVDATGAGDAFVAGILSQLSTDF 352
L A L +VT G + + L E D TGAGDA +G L+ ++
Sbjct: 210 ILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGK 269
Query: 353 SLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+ +R+ALR A A+TV A ++++V +
Sbjct: 270 T-------IREALRQGAAAAAITVQSSFATSQDLSKDSVEAML 305
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 2e-41
Identities = 68/336 (20%), Positives = 120/336 (35%), Gaps = 83/336 (24%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSS-AFIGKTTLFCFYEHVKVIILPCPK 134
T + PGG AN AV +A++G F+
Sbjct: 40 TQKAIE------MNVFPGGKGANQAVTVAKIGEKGCRFVTC------------------- 74
Query: 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSA 189
+G D++ +L + ++ + G T AF+ + G+ N P A
Sbjct: 75 IGNDDYSDLLIENYEKLGITGY---IRVSLPTGRAFIEVDKTGQ-------NRIIIFPGA 124
Query: 190 DMLLQEAELDLSLITKAKIFHYGSISLIT------EPCKSAHIAAAKAAKDAGVVLSYDP 243
+ L++ +D + ++++ I L+ E + AK ++ +DP
Sbjct: 125 NAELKKELIDWNTLSESDI-------LLLQNEIPFE-------TTLECAKRFNGIVIFDP 170
Query: 244 NLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA----VVYKLFHAN 299
P A+ I++ D + +E+EI L+ + + K
Sbjct: 171 A------P----AQGINEEIFQYLDYLTPNEKEIEALS-KDFFGEFLTVEKAAEKFLELG 219
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
+K ++V G G K+ KV+AVD T AGD F LS +
Sbjct: 220 VKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN------ 273
Query: 360 QLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+A+ F A A++V GA ++P RE V +
Sbjct: 274 -PEEAVIFGTAAAAISVTRLGAQSSIPAREEVEAFL 308
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 | Back alignment and structure |
|---|
Score = 146 bits (372), Expect = 3e-41
Identities = 74/327 (22%), Positives = 107/327 (32%), Gaps = 76/327 (23%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135
TV S + PGG AN AV AR G F G
Sbjct: 45 TVLAAS------LTRTPGGKGANQAVAAARAGAQVQFSGA-------------------F 79
Query: 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSAD 190
G D L L+ N V PG + A + + + E N P A+
Sbjct: 80 GDDPAAAQLRAHLRANAVGLDRTVTVPGP-SGTAIIVVDASAE-------NTVLVAPGAN 131
Query: 191 MLLQEAELDLSLITKAKIFHYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLRLP 248
L S + + L+T E + +AAA+AA+ A V+ + +
Sbjct: 132 AHLTPVP---SAVANCDV-------LLTQLEIPVATALAAARAAQSADAVVMVNAS---- 177
Query: 249 LWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEG 308
P A + R + + AD++ +E E + ++T G
Sbjct: 178 --P-AGQDRSSLQDLAAIADVVIANEHEANDWPSPPTH----------------FVITLG 218
Query: 309 PDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFA 368
G RY D V V VD GAGD F + + + + ALR A
Sbjct: 219 VRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGS---PAERLRALRRA 275
Query: 369 NACGALTVMERGAIPALPTREAVLNAI 395
A GAL + G P A+ A+
Sbjct: 276 CAAGALATLVSGVGDCAPAAAAIDAAL 302
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 1e-40
Identities = 73/331 (22%), Positives = 128/331 (38%), Gaps = 69/331 (20%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135
T+ G F GG AN V ARLG ++ + K V
Sbjct: 50 TIHG------HKFFIGFGGKGANQCVQAARLGAMTSMVCK-------------------V 84
Query: 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSAD 190
G D FG + LK+N+++ A T A + + ++G+ N A+
Sbjct: 85 GKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQ-------NIIVIVAGAN 137
Query: 191 MLLQEAELD--LSLITKAKIFHYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLR 246
+LL +L ++I++AK+ ++ E + + A A+ +GV ++P
Sbjct: 138 LLLNTEDLRAAANVISRAKV-------MVCQLEITPATSLEALTMARRSGVKTLFNP--- 187
Query: 247 LPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA----VVYKLFHANLKL 302
A + + +D+ +E E LT G A L ++
Sbjct: 188 ------APAIADLDPQFYTLSDVFCCNESEAEILT-GLTVGSAADAGEAALVLLKRGCQV 240
Query: 303 LLVTEGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQ 360
+++T G +GC ++ + KV+AVD TGAGD+FV + L+
Sbjct: 241 VIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLA-----YYPNLS 295
Query: 361 LRDALRFANACGALTVMERGAIPALPTREAV 391
L D L +N A++V G + P ++ +
Sbjct: 296 LEDMLNRSNFIAAVSVQAAGTQSSYPYKKDL 326
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 8e-39
Identities = 59/325 (18%), Positives = 104/325 (32%), Gaps = 79/325 (24%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135
++ G+ + GG AN A+ ++R G + I
Sbjct: 28 SIHGVK------VSQDIGGKGANQAIILSRCGIETRLIAA-------------------T 62
Query: 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSAD 190
G D G + +K + + + + +DG+ N +A
Sbjct: 63 GNDSNGAWIRQQIKNEPLMLLPDGHFNQH-SDTSIILNSADGD-------NAIITTTAAA 114
Query: 191 MLLQEAELD--LSLITKAKIFHYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLR 246
E+ ++ I L+ A + A+ G+ ++P+
Sbjct: 115 DTFSLDEMIPHMADAVAGDI-------LLQQGNFSLDKTRALFQYARSRGMTTVFNPS-- 165
Query: 247 LPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVT 306
P +W DI ++E E L +K L++T
Sbjct: 166 ----P----VNPDFCHLWPLIDIAVVNESEAELLQP---------------YGVKTLVIT 202
Query: 307 EGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 366
+G G + + EA+D TGAGD F+A +L+ LL+ AL
Sbjct: 203 QGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASA-----LLRGVAPDALALA 257
Query: 367 FANACGALTVMERGAIPALPTREAV 391
A+ A+TV RG + A P +
Sbjct: 258 HASRAAAITVSRRGTLSAFPGSREL 282
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-32
Identities = 70/318 (22%), Positives = 118/318 (37%), Gaps = 48/318 (15%)
Query: 82 LAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141
+ +A GG+ N A G+A LGG +A+ G V AD+ G
Sbjct: 69 YSRMGPALEASGGSAGNTAAGVANLGGKAAYFG-------------------NVAADQLG 109
Query: 142 YMLADILKENNVNGAGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQEAELD 199
+ ++ V+ TA + FVT DGER Y + L +++
Sbjct: 110 DIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVT--EDGERSMNTYLGACVE--LGPEDVE 165
Query: 200 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSY-DPNLRLPLWPSADKA 256
++ AK+ ++ K A + A+ A G + ++ D D+
Sbjct: 166 ADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFC-------VDRY 218
Query: 257 REGILSIWETA--DIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 314
R L + + DI+ + +E L Q +D ++A+ A+ K+ VT +G
Sbjct: 219 RGEFLDLMRSGKVDIVFANRQEALSLYQTDDF-EEAL--NRIAADCKIAAVTMSENGAVI 275
Query: 315 YTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373
V +++ E VD TGAGD F +G L + S L D +
Sbjct: 276 LKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLAAG 328
Query: 374 LTVMERGAIPALPTREAV 391
+ + + G P EA
Sbjct: 329 IVIQQIGPRPMTSLSEAA 346
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-27
Identities = 52/337 (15%), Positives = 103/337 (30%), Gaps = 76/337 (22%)
Query: 82 LAESPAFKKAPGGAPANVA-----VGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136
+ + P + PGG+ NVA + A G ++G +
Sbjct: 53 IEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKFVTYVGC-------------------IA 93
Query: 137 ADEFGYMLADILKENNVNGAGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQ 194
D +G +L + + + + A + +T ER + + L
Sbjct: 94 DDRYGKVLKEAAEHEGIV-MAVEHTTKAGSGACAVCIT---GKERTLVADLGAANH--LS 147
Query: 195 EAELD----LSLITKAKIFH---YGSISLITEPCKSAHIAAAKAAKDAGVV----LSYDP 243
+ + + +++IF+ + +T + + A + A++ + LS P
Sbjct: 148 SEHMRSPAVVRAMDESRIFYFSGF----TLT-VDVNHVLQACRKAREVDGLFMINLS-AP 201
Query: 244 NLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAV---------VYK 294
+ + + DII + E D V
Sbjct: 202 FI-------MQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVP 254
Query: 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTD 351
++++ T + TKD V ++ + +D GAGDAF+ G LS +
Sbjct: 255 YTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVG 314
Query: 352 FSLLQKEDQLRDALRFANACGALTVMERGA-IPALPT 387
LR + + G P P+
Sbjct: 315 KD-------LRRCCETGHYTAQEVIQRDGCSFPEKPS 344
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 4e-27
Identities = 60/344 (17%), Positives = 105/344 (30%), Gaps = 86/344 (25%)
Query: 89 KKAPGGAPANVAVGIARL---GGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLA 145
PGG+ N + +L GS+ ++G +G D G +L
Sbjct: 84 TSLPGGSALNSVRVVQKLLRKPGSAGYMGA-------------------IGDDPRGQVLK 124
Query: 146 DILKENNVNGAGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLI 203
++ + + PG T + + ER + + E +
Sbjct: 125 ELCDKEGLA-TRFMVAPGQSTGVCAVLIN---EKERTLCTHLGACGS--FRLPEDWTTFA 178
Query: 204 TKAKIFH---YGSISLITEPCKSAHIAAAKAAKDAGVV----LSYDPNLRLPLWPSADKA 256
+ A IF+ Y +T K+A A A + LS P +
Sbjct: 179 SGALIFYATAY----TLTATPKNALEVAGYAHGIPNAIFTLNLS-APFC-------VELY 226
Query: 257 REGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL---------------- 300
++ + S+ +I+ +EEE + L + +
Sbjct: 227 KDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAG 286
Query: 301 ------KLLLVTEGPDGCRYYTKDFSGRVQGLKVE--------AVDATGAGDAFVAGILS 346
KL+++T G + + G V +V VD GAGDAFV G L
Sbjct: 287 QNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLY 346
Query: 347 QLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREA 390
LS + ++ + NAC + G +
Sbjct: 347 ALSQGKT-------VKQCIMCGNACAQDVIQHVGFSLSFTFTSG 383
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 8e-27
Identities = 60/340 (17%), Positives = 108/340 (31%), Gaps = 72/340 (21%)
Query: 80 LSLAESPAFKKAPGGAPAN---VAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136
L E + GG+ N VA I + ++ F G VG
Sbjct: 67 QELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFFGC-------------------VG 107
Query: 137 ADEFGYMLADILKENNVNGAGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQ 194
DE+ +L + N VN + + T VT +R + D +
Sbjct: 108 QDEYARILEERATSNGVN-VQYQRSATSPTGTCAVLVT---GTQRSLCANLAAANDFTPE 163
Query: 195 EAELD--LSLITKAKIFH---YGSISLITEPCKSAHIAAAKAAKDAGVV----LSYDPNL 245
D + + A+ F+ + T + ++ AK A G + LS P +
Sbjct: 164 HLRSDGNRAYLQGAQFFYVSGF----FFT-VSFESALSVAKEAAATGRMFMMNLS-APFV 217
Query: 246 RLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---------AVVYKLF 296
+ + I+ D++ +E E L + + + A + K
Sbjct: 218 -------PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKRIAALPKEN 270
Query: 297 HANLKLLLVTEGPDGCRYYTKDFSGRVQ-----GLKVEAVDATGAGDAFVAGILSQLSTD 351
+++++T+G D + + VD GAGDAFV G L+QL
Sbjct: 271 GKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQS 330
Query: 352 FSLLQKEDQLRDALRFANACGALTVMERGA-IPALPTREA 390
+ + ++ + G P+ A
Sbjct: 331 RT-------VDVCIKCGIWAAREIIQRSGCTFEGEPSFCA 363
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 8e-26
Identities = 64/336 (19%), Positives = 117/336 (34%), Gaps = 74/336 (22%)
Query: 81 SLAESPAFKKAPGGAPANVAV----GIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136
L + + GG+ N I + ++ F G +G
Sbjct: 51 ELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGC-------------------IG 91
Query: 137 ADEFGYMLADILKENNVNGAGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQ 194
D+FG +L E +V+ A T A +T D +A+ +
Sbjct: 92 IDKFGEILKRKAAEAHVD-AHYYEQNEQPTGTCAACIT--GDNRSLIANLA--AANCYKK 146
Query: 195 EAELDL----SLITKAKIFH---YGSISLITEPCKSAHIAAAKAAKDAGVV----LSYDP 243
E LDL L+ KA++ + + +T + + A A + + LS P
Sbjct: 147 EKHLDLEKNWMLVEKARVCYIAGF----FLTV-SPESVLKVAHHASENNRIFTLNLS-AP 200
Query: 244 NLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---------AVVYK 294
+ + +E ++ + DI+ +E E + + + + K
Sbjct: 201 FI-------SQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPK 253
Query: 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL---KVEAVDATGAGDAFVAGILSQLSTD 351
+ ++++ T+G D T+ L + E +D GAGDAFV G LSQL +D
Sbjct: 254 MNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSD 313
Query: 352 FSLLQKEDQLRDALRFANACGALTVMERGA-IPALP 386
L + +R + ++ + G P P
Sbjct: 314 KP-------LTECIRAGHYAASIIIRRTGCTFPEKP 342
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 2e-16
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 268 DIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK 327
D IK +E+E+ + + + + + + L+V+ G G +V K
Sbjct: 184 DFIKPNEDEVIAILDEKTNSLEENI-RTLAEKIPYLVVSLGAKGSICAHNGKLYQVIPPK 242
Query: 328 VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 387
V+ + TGAGD FV ++ L+ + + + L+ A C A VM++ + +
Sbjct: 243 VQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLKVATGCSASKVMQQDS--SSFD 293
Query: 388 REAV 391
EA
Sbjct: 294 LEAA 297
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 8e-16
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 268 DIIKISEEEISFLTQ---GEDPYDDAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGR 322
+IK + EE+ L E+P K A ++ ++++ G DG D R
Sbjct: 182 YLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYR 241
Query: 323 VQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 382
V+ ++A + G+GDA +AG+ L + + L++ A G ER
Sbjct: 242 VKIPTIQAKNPVGSGDATIAGLAY------GLAKDAP-AAELLKWGMAAGMANAQERMT- 293
Query: 383 PALPTREAV 391
E V
Sbjct: 294 -GHVDVENV 301
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 8e-16
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 268 DIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 324
IK +++E+ + D V+ L + ++V+ G DG Y K+ S +
Sbjct: 176 LFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAV 235
Query: 325 GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 384
+ + V+ G+GD+ VAG+++ + + A + A ACG T +
Sbjct: 236 NPQGKVVNTVGSGDSTVAGMVA------GIASGLS-IEKAFQQAVACGTATAFDED---- 284
Query: 385 LPTREAV 391
L TR+A+
Sbjct: 285 LATRDAI 291
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 1e-15
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 268 DIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 324
IK + E+S L + + +L ++ +LV+ DG + + + V
Sbjct: 176 SFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVN 235
Query: 325 GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 384
E ++ GAGD+ VAG L+ +L + + L DA+ FA A G+ T G
Sbjct: 236 VPSGEVRNSVGAGDSVVAGFLA------ALQEGKS-LEDAVPFAVAAGSATAFSDG---- 284
Query: 385 LPTREAV 391
TRE V
Sbjct: 285 FCTREEV 291
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 3e-15
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 13/128 (10%)
Query: 268 DIIKISEEEISFLTQGE--DPYDDAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGRV 323
+IK + E+ L + + + ++ ++V+ G G RV
Sbjct: 200 TVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRV 259
Query: 324 QGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383
+ ++ G+GD+ VAGI S ++L E+ D L+ AN G L E
Sbjct: 260 NIPTISVLNPVGSGDSTVAGITS------AILNHEN-DHDLLKKANTLGMLNAQEAQT-- 310
Query: 384 ALPTREAV 391
Sbjct: 311 GYVNLNNY 318
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 7e-15
Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 268 DIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLL--------LVTEGPDGCRYYTKDF 319
+++K +++E+S L E D V A +++ +V+ GP G +
Sbjct: 182 ELVKPNQKELSALVNRELTQPDDVR----KAAQEIVNSGKAKRVVVSLGPQGALGVDSEN 237
Query: 320 SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 379
+V V++ GAGD+ V + +L+ + S L + +RF A G+ + +
Sbjct: 238 CIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQ 290
Query: 380 GAIPALPTREAV 391
G L + +
Sbjct: 291 GT--RLCSHDDT 300
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-12
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 12/128 (9%)
Query: 268 DIIKIS-EEEISFLTQGEDPYDDAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 324
+++K + + D V + ++ +V+ T++ ++
Sbjct: 199 NVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKSQVSVVSYEVKNDIVATREGVWLIR 258
Query: 325 G-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383
+++ GAGDA+VAG++ ++ + +F A +
Sbjct: 259 SKEEIDTSHLLGAGDAYVAGMVY------YFIKHGANFLEMAKFGFASALAATRRKE--K 310
Query: 384 ALPTREAV 391
+P EA+
Sbjct: 311 YMPDLEAI 318
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 400 | |||
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 100.0 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 100.0 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 100.0 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 100.0 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 100.0 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 100.0 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 100.0 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 100.0 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 100.0 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 100.0 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 100.0 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 100.0 | |
| 4gm6_A | 351 | PFKB family carbohydrate kinase; enzyme function i | 100.0 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 100.0 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 100.0 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 100.0 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 100.0 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 100.0 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 100.0 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 100.0 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 100.0 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 100.0 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 100.0 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 100.0 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 100.0 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 100.0 | |
| 3vas_A | 370 | Putative adenosine kinase; ribokinase, enzyme, tra | 100.0 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 100.0 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 100.0 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 100.0 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 100.0 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 100.0 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 100.0 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 100.0 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 100.0 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 100.0 | |
| 3umo_A | 309 | 6-phosphofructokinase isozyme 2; glycolysis, trans | 100.0 | |
| 3uq6_A | 372 | Adenosine kinase, putative; ribokinase, transferas | 100.0 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 100.0 | |
| 4e84_A | 352 | D-beta-D-heptose 7-phosphate kinase; LPS-heptose b | 100.0 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 100.0 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 100.0 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 100.0 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 100.0 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 100.0 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 100.0 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 100.0 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 100.0 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 100.0 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 100.0 | |
| 2ddm_A | 283 | Pyridoxine kinase; pyridoxal kinase, ribokinase, p | 99.92 | |
| 2yxt_A | 312 | Pyridoxal kinase; beta sheet with alpha helix, met | 99.92 | |
| 1jxh_A | 288 | Phosphomethylpyrimidine kinase; THID, ribokinase f | 99.87 | |
| 1ub0_A | 258 | THID, phosphomethylpyrimidine kinase; thiamin bios | 99.87 | |
| 2i5b_A | 271 | Phosphomethylpyrimidine kinase; ADP complex, PDXK, | 99.85 | |
| 3mbh_A | 291 | Putative phosphomethylpyrimidine kinase; structura | 99.81 | |
| 3h74_A | 282 | Pyridoxal kinase; PSI-II, structural genomics, pro | 99.8 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 99.79 | |
| 3zs7_A | 300 | Pyridoxal kinase; transferase, sleeping sickness; | 99.75 | |
| 1ekq_A | 272 | Hydroxyethylthiazole kinase; alpha-beta, transfera | 99.58 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 99.55 | |
| 1v8a_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 99.18 | |
| 3bgk_A | 311 | SMU.573, putative uncharacterized protein; alpha/b | 99.01 | |
| 3dzv_A | 273 | 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ | 98.99 | |
| 2r3b_A | 310 | YJEF-related protein; putative kinase in the ribok | 98.98 | |
| 3rpz_A | 279 | ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str | 98.78 | |
| 3rss_A | 502 | Putative uncharacterized protein; unknown function | 98.63 | |
| 3drw_A | 474 | ADP-specific phosphofructokinase; AMP, GLYC kinase | 98.56 | |
| 3nl6_A | 540 | Thiamine biosynthetic bifunctional enzyme; thiamin | 98.39 | |
| 1ua4_A | 455 | Glucokinase, ADP-dependent glucokinase; transferas | 98.32 | |
| 3hpd_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 98.21 | |
| 1gc5_A | 467 | ADP-dependent glucokinase; ALFA/beta sandwichs, in | 97.99 | |
| 1l2l_A | 457 | ADP-dependent glucokinase; ADP glucokinase APO, tr | 97.89 | |
| 3k5w_A | 475 | Carbohydrate kinase; 11206B,helicobacter pylori,PS | 97.43 |
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-54 Score=419.08 Aligned_cols=314 Identities=37% Similarity=0.596 Sum_probs=270.5
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|.++++|+|||++++|++...++.|.. ...+...+||++.|+|++|+|||.++.++|. +|
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG 60 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPLVKKGM-PRAFLQCAGGAPANVAVAVARLGGAVQFVGM-------------------LG 60 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCCSSTTS-CCCEEEEEECHHHHHHHHHHHHTCCEEEESE-------------------EE
T ss_pred CCCCCCEEEEChhhhheeccCCCCccc-hhceeecCCChHHHHHHHHHhCCCCEEEEee-------------------cc
Confidence 456689999999999999988776553 6778899999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+|.+|+++++.|+++||+++++.+.++.+|+.+++.++++|+|++.+++.++++..+++++++.+.+++++++|++++.+
T Consensus 61 ~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l 140 (338)
T 3ljs_A 61 SDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSM 140 (338)
T ss_dssp SSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGG
T ss_pred CCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHh
Confidence 99999999999999999999999888889999999999999999988877788888888888877889999999999887
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
..+...+.+.++++.++++|+++++||+++..+|.+.+...+.+.++++++|++++|++|++.|++....+.+++++.|+
T Consensus 141 ~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~ 220 (338)
T 3ljs_A 141 TDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLW 220 (338)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHHHHHT
T ss_pred cCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHHHHHH
Confidence 77777888999999999999999999999998887666667788889999999999999999999876655445788888
Q ss_pred hCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC--------------CccccchHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--------------FSLLQKEDQLR 362 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g--------------~~~~~~~~~l~ 362 (400)
+.|++.|+||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++| ++ ++
T Consensus 221 ~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~ 293 (338)
T 3ljs_A 221 QGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IV 293 (338)
T ss_dssp TTTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HH
T ss_pred hcCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HH
Confidence 9999999999999999999999999999999999999999999999999999998 55 99
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 363 DALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 363 ~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+|+++|+++|+++|++.|+.+++|++++|++++++
T Consensus 294 ~al~~A~~~aa~~v~~~Ga~~~~p~~~ev~~~~~~ 328 (338)
T 3ljs_A 294 STLRFAAAVGALAVTRQGAFTAMPMLSEVLSLIQE 328 (338)
T ss_dssp HHHHHHHHHHGGGC----CCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHhh
Confidence 99999999999999999999999999999999875
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-52 Score=402.19 Aligned_cols=312 Identities=27% Similarity=0.421 Sum_probs=281.7
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|.++++|++||++++|++...++.|..+...+...+||++.|+|++|++||.++.++|. +|
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 65 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSR-------------------VG 65 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEE-------------------EE
T ss_pred cccCCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEE-------------------eC
Confidence 34567899999999999998888888778888999999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCc-cccCCccccchhhcCCccEEEEcccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA-DMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~-~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
+|.+|+++++.|+++||+++++.+.++.+|+.+++.++.+|++.+.+++.+++ +..+++++++.+.+++++++|++++.
T Consensus 66 ~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~ 145 (319)
T 3pl2_A 66 NDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTG 145 (319)
T ss_dssp SSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGG
T ss_pred CCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEeccc
Confidence 99999999999999999999998888889999999888889998888876655 67788888887888999999999887
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
+..++..+....+++.+++ +.++++|++++..+|.+.+...+.+.++++++|++++|++|++.|+|... .++.++.|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~l 222 (319)
T 3pl2_A 146 FSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETE--PERAGRAL 222 (319)
T ss_dssp GSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCS--HHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCC--HHHHHHHH
Confidence 7666666677777777666 66789999999999988888888889999999999999999999998753 46678889
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
+++|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++
T Consensus 223 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~ 295 (319)
T 3pl2_A 223 LERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALV 295 (319)
T ss_dssp HHTTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999889999999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhC
Q 015777 376 VMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++.|+..++|+++|+++++++
T Consensus 296 v~~~G~~~~~p~~~ev~~~l~~ 317 (319)
T 3pl2_A 296 ASRLECSTAMPTTDEVEASLNQ 317 (319)
T ss_dssp HTSSCSGGGCCCHHHHHHHCC-
T ss_pred HhccCCcCCCCCHHHHHHHHhc
Confidence 9999998889999999999876
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-51 Score=396.22 Aligned_cols=310 Identities=28% Similarity=0.413 Sum_probs=269.9
Q ss_pred CCCcEEEEccceeecccCcCCCCccC-CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAE-SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~-~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|++|+|||++++|++...++..... .......+||++.|+|++|++||.++.++|. +|+
T Consensus 2 ~m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~ 62 (330)
T 3iq0_A 2 SLSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISC-------------------VGN 62 (330)
T ss_dssp --CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EES
T ss_pred CCCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEE-------------------eCC
Confidence 35689999999999997643322211 1123568999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++.+.++.+|+.+++.++.+|+|++.+++..++...++++++..+.+++++++|++++...
T Consensus 63 D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~ 142 (330)
T 3iq0_A 63 DGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLF 142 (330)
T ss_dssp SHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCS
T ss_pred ChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhc
Confidence 99999999999999999999988888899999999999999977776656677778888888788999999999988765
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
.+...+.+.++++.++++|+++++||+++..+|... ..++.+.++++++|++++|++|++.|++.. +.+++++.+++
T Consensus 143 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~ 219 (330)
T 3iq0_A 143 SFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSPHS--TPERAIAGFLE 219 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCSCS--SHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhCCC--CHHHHHHHHHH
Confidence 566677888999999999999999999988877643 366778889999999999999999999875 34677888888
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++|+
T Consensus 220 ~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~ 292 (330)
T 3iq0_A 220 EGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVT 292 (330)
T ss_dssp HTCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHc
Confidence 99999999999999999999889999999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHhC
Q 015777 378 ERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~~~l~~ 397 (400)
+.|+.+++|++++|++++++
T Consensus 293 ~~G~~~~~p~~~ev~~~~~~ 312 (330)
T 3iq0_A 293 RRGPMEGTSRLMEIETFIQR 312 (330)
T ss_dssp SCSSSTTCCCHHHHHHHHHH
T ss_pred CcCCCCCCCCHHHHHHHHHh
Confidence 99998889999999998875
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-50 Score=390.07 Aligned_cols=313 Identities=25% Similarity=0.426 Sum_probs=272.1
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
++++|+|+|++++|++....+.+......+...+||++.|+|++|++||.++.++|. +|+|
T Consensus 10 ~~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D 70 (332)
T 2qcv_A 10 REFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGK-------------------IADD 70 (332)
T ss_dssp CSEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEE-------------------ECSS
T ss_pred cCCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEE-------------------eCCC
Confidence 346899999999999988766665556678899999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecC-CCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDP-GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~-~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
.+|+++++.|+++||+++++...+ +.+|+.+++.++.+|++++.+++...++..+++++++...+++++++|++++...
T Consensus 71 ~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~ 150 (332)
T 2qcv_A 71 QHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALS 150 (332)
T ss_dssp HHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGS
T ss_pred HHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCcccc
Confidence 999999999999999999998765 4689999998777888888887766677778888887777889999999887665
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC-CcHHHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED-PYDDAVVYKLF 296 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~-~~~~~~~~~l~ 296 (400)
.+.+.+.+.++++.++++|+++++||+.+...|...+...+.+.++++++|++++|++|++.|++... .+..+.+++++
T Consensus 151 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~ 230 (332)
T 2qcv_A 151 KSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLF 230 (332)
T ss_dssp STTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHH
Confidence 55566788899999999999999999988888876666677788899999999999999999998752 23456778888
Q ss_pred hCCCcEEEEEecCCcEEEEeC-CceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++|++.|+||+|++|++++.+ ++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 231 ~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~ 303 (332)
T 2qcv_A 231 KHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIV 303 (332)
T ss_dssp TSSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 899999999999999999988 668899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhC
Q 015777 376 VMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++.|+.+.+|+++++++++++
T Consensus 304 v~~~G~~~~~p~~~ev~~~l~~ 325 (332)
T 2qcv_A 304 VSKHSSSDAMPSVEEIEALIEK 325 (332)
T ss_dssp HHC-----CCCCHHHHHHHHHH
T ss_pred HccCCCccCCCCHHHHHHHHhc
Confidence 9999998889999999998864
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=394.42 Aligned_cols=309 Identities=29% Similarity=0.422 Sum_probs=263.8
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|.++++|+|||++++|++...++. ......+...+||++.|+|++|++||.++.++|. +|
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG 82 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRPGP-LEHAEAFHKRTAGAETNVAIGLARLGLKVGWASR-------------------LG 82 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EC
T ss_pred cCCCCCEEEEChhhhhccCCCCCc-cchhhheeecCCCHHHHHHHHHHhCCCcEEEEEE-------------------eC
Confidence 345678999999999999876542 3356678899999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCC-eeEEEecCCCccccCCccccchhhcCCccEEEEcccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE-REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~-r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
+|.+|+++++.|+++||+++++.+.++.+|+.+++.++++|+ +.+.+++..++...+++++++.+.+++++++|++++.
T Consensus 83 ~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~ 162 (336)
T 4du5_A 83 TDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVF 162 (336)
T ss_dssp SSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSG
T ss_pred CCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCch
Confidence 999999999999999999999998888899999999988894 4555666677888889988888889999999988875
Q ss_pred c-cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHH
Q 015777 216 L-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYK 294 (400)
Q Consensus 216 ~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~ 294 (400)
. ..+...+.+.++++.+++.|+++++||++++.+|...+.+.+.+.++++++|++++|++|++.|+|..+ .+++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~--~~~~~~~ 240 (336)
T 4du5_A 163 PAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT--PEGVARF 240 (336)
T ss_dssp GGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCS--HHHHHHH
T ss_pred hhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCC--HHHHHHH
Confidence 4 355566788899999999999999999999999988777788888999999999999999999999753 4677888
Q ss_pred HHhCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
+.++|++.|+||+|++|++++.+++.+++|+++++ ++|||||||+|.|||+++|++|++ +++|+++|+++|+
T Consensus 241 l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa 313 (336)
T 4du5_A 241 YRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGA 313 (336)
T ss_dssp HHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 99999999999999999999999989999999997 999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHH
Q 015777 374 LTVMERGAIPALPTREAVLNA 394 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~~ 394 (400)
++|++.|+.+++|+++||+++
T Consensus 314 ~~v~~~G~~~~~p~~~ev~~~ 334 (336)
T 4du5_A 314 RAVQVLGDSEGLPTRAELNAA 334 (336)
T ss_dssp HHHC------CCCCHHHHHCC
T ss_pred HHhccCCCccCCCCHHHHHhc
Confidence 999999999889999999864
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-52 Score=404.59 Aligned_cols=308 Identities=30% Similarity=0.550 Sum_probs=251.1
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.++++|+|||++++|++...++.|..+...+...+||++.|+|++|++||.++.++|. +|+
T Consensus 19 ~~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG~ 79 (327)
T 3hj6_A 19 KGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISR-------------------LGA 79 (327)
T ss_dssp ---CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECE-------------------EES
T ss_pred cCCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEE-------------------eCC
Confidence 4567899999999999999888888788889999999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|+++||+++++.+.++.+|+++++..+ +|++++.+++ +++..++++++..+.++++|++|++++.+.
T Consensus 80 D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~ 156 (327)
T 3hj6_A 80 DAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYR--EADMYLQEDDIIFELIKRSKVFHLSTFILS 156 (327)
T ss_dssp SHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEEC--SGGGGCCSCCCHHHHHC--CEEEEESHHHH
T ss_pred CHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEec--ChhhhCChhhcCHhHhccCCEEEECchHhc
Confidence 9999999999999999999998888889999988765 6899888874 467777777777778899999999998766
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
.+.+.+.+.++++.++++|+++++||+++..+|...+...+.+.++++++|++++|++|++.|++..+. ++.++.+++
T Consensus 157 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~--~~~~~~l~~ 234 (327)
T 3hj6_A 157 RKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSP--ENYVKRYLE 234 (327)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCS--SGGGGGGTT
T ss_pred CchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHh
Confidence 666778889999999999999999999988888765555677788899999999999999999998443 346677888
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++++
T Consensus 235 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~ 307 (327)
T 3hj6_A 235 LGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIR 307 (327)
T ss_dssp TTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC-
T ss_pred CCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhc
Confidence 89999999999999999998889999999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHh
Q 015777 378 ERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~~~l~ 396 (400)
+.|+..++|++++++++++
T Consensus 308 ~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 308 GVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp -------------------
T ss_pred CCCCCCCCCCHHHHHHHhc
Confidence 9999889999999999875
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=385.70 Aligned_cols=310 Identities=23% Similarity=0.289 Sum_probs=267.8
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+++|+|||++++|++.... .+..+...+...+||++.|+|++|++||.++.++|. +|+|
T Consensus 1 m~~~v~viG~~~~D~~~~~~-~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D 60 (346)
T 3ktn_A 1 MSLKIAAFGEVMLRFTPPEY-LMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITK-------------------LPAN 60 (346)
T ss_dssp -CCEEEEECCCEEEEECSTT-CCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEE-------------------ECSS
T ss_pred CCCcEEEeChhhhhhcCCCC-CcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEe-------------------cCCC
Confidence 45789999999999997432 233356778899999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEe--cCCCccccCCccccc-hhhcCCccEEEEcccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY--RNPSADMLLQEAELD-LSLITKAKIFHYGSIS 215 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~--~~~~~~~~l~~~~l~-~~~i~~~~~v~~~~~~ 215 (400)
.+|+++++.|++.||+++++... +.+|+++++..+.+++++++.+ +..++...+++++++ .+.+++++++|++++.
T Consensus 61 ~~g~~i~~~l~~~gv~~~~v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~ 139 (346)
T 3ktn_A 61 RLGEAGKAALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGIS 139 (346)
T ss_dssp HHHHHHHHHHHHTTCBCTTEEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHH
T ss_pred HHHHHHHHHHHHcCCcceEEEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCcc
Confidence 99999999999999999999875 5699999998876667666554 555677778888887 4678999999999876
Q ss_pred c-cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCCh--HHHHHhHHhhhccCcEEEcCHhHHhcccCCC-CC-----
Q 015777 216 L-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGE-DP----- 286 (400)
Q Consensus 216 ~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~--~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~-~~----- 286 (400)
. ..+...+.+.++++.++++|+++++||+++..+|... +...+.+.++++++|++++|++|++.|++.. ..
T Consensus 140 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 219 (346)
T 3ktn_A 140 LSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGE 219 (346)
T ss_dssp HHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHH
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccch
Confidence 4 3444567888999999999999999999998888743 5567788889999999999999999999987 32
Q ss_pred -cHHHHHHHHHhC-CCcEEEEEecCCc-------EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 287 -YDDAVVYKLFHA-NLKLLLVTEGPDG-------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 287 -~~~~~~~~l~~~-g~~~vvvT~G~~G-------~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
+..+++++|.+. |++.|+||+|.+| ++++.+++.+++|+++++++|||||||+|+|||+++|++|++
T Consensus 220 ~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~---- 295 (346)
T 3ktn_A 220 AQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS---- 295 (346)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC----
Confidence 234556777764 9999999999998 988888888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 358 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 358 ~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++|+++|++++++.|+.+ +|++++|++++++
T Consensus 296 ---l~~a~~~A~a~aa~~v~~~G~~~-~p~~~ev~~~l~~ 331 (346)
T 3ktn_A 296 ---LEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVLEH 331 (346)
T ss_dssp ---HHHHHHHHHHHHHHHTTSSSSCC-CCCHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHhc
Confidence 99999999999999999999986 8999999999875
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-49 Score=382.21 Aligned_cols=305 Identities=27% Similarity=0.375 Sum_probs=268.1
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
|+|+|+|++++|++...++ +......+...+||++.|+|++++|||.++.++|. +|+|.+
T Consensus 2 ~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~-------------------vG~D~~ 61 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIAR-------------------VGNDEF 61 (313)
T ss_dssp CCEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EESSHH
T ss_pred CeEEEECcceEEEecCCCC-cccccceeEecCCChHHHHHHHHHHCCCcEEEEEE-------------------eCCCHH
Confidence 5899999999999974332 22345667889999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEE--EcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVT--LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI- 217 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~--~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~- 217 (400)
|+++++.|+++||+++++...++.+|+.+++. ++++|++++.+++..++...+++++++.+.+++++++|++++...
T Consensus 62 g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~ 141 (313)
T 2v78_A 62 GKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAI 141 (313)
T ss_dssp HHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHH
T ss_pred HHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhc
Confidence 99999999999999999988788899999998 888899998888766677778888887777889999999887542
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCc--EEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETAD--IIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~d--vl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
.+...+.+.++++.+++. ++||+.+..+|.+.+.+++.+.++++++| ++++|++|++.|++.. +.++.++++
T Consensus 142 ~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~--~~~~~~~~l 215 (313)
T 2v78_A 142 SDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVT--DPDEAYRKY 215 (313)
T ss_dssp CHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCC--CHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCC--CHHHHHHHH
Confidence 344566777777777654 89999988888766677778888999999 9999999999999864 345677888
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++.|++.|+||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 216 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~ 288 (313)
T 2v78_A 216 KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLV 288 (313)
T ss_dssp HHTTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 8899999999999999999988888899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++.|+.+++|++++++++++++
T Consensus 289 v~~~G~~~~~~~~~~v~~~~~~~ 311 (313)
T 2v78_A 289 ITVRGDNELTPTLEDAERFLNEF 311 (313)
T ss_dssp HTSSSSSTTCCCHHHHHHHHHHC
T ss_pred hccCCCCCCCCCHHHHHHHHHhc
Confidence 99999988889999999998875
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-49 Score=378.09 Aligned_cols=300 Identities=30% Similarity=0.425 Sum_probs=262.4
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
|+|+|+|++++|++...++ +......+...+||++.|+|++|++||.++.++|. +|+|.+
T Consensus 2 ~~i~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------vG~D~~ 61 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGR-------------------VGEDEL 61 (309)
T ss_dssp CSEEEESCCEEEEECSSSS-CGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEE-------------------ECSSHH
T ss_pred CcEEEEccceEEEecCCCC-cccchheeeeecCcHHHHHHHHHHHcCCCeEEEEE-------------------eCCCHH
Confidence 5899999999999974332 22345667889999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-Cc
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI-TE 219 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~-~~ 219 (400)
|+++++.|+++||+++++...++ +|+++++.++.+|++++.+++..++...+++++++.+.+++++++|++++... .+
T Consensus 62 g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 140 (309)
T 1v1a_A 62 GAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSP 140 (309)
T ss_dssp HHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCH
T ss_pred HHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCc
Confidence 99999999999999999988888 99999999988899998887766677778888887778899999999987653 45
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g 299 (400)
...+.+.++++.++++|+++++||+.+..+|. .+.+.+.+.++++++|++++|++|++.|++.. +++++ +.|
T Consensus 141 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----~~~~~---~~g 212 (309)
T 1v1a_A 141 EARAFSLWAMEEAKRRGVRVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV----EEALR---ALS 212 (309)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----HHHHH---HTC
T ss_pred hHHHHHHHHHHHHHHcCCEEEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----HHHHH---hcC
Confidence 56678888999999999999999999888884 55666778889999999999999999999864 34443 789
Q ss_pred CcEEEEEecCCcEEEEeC-CceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 300 LKLLLVTEGPDGCRYYTK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++.|+||+|++|+++ .+ ++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++
T Consensus 213 ~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~ 284 (309)
T 1v1a_A 213 APEVVLKRGAKGAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAAS 284 (309)
T ss_dssp CSEEEEECGGGCEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEEecCCCeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcC
Confidence 999999999999998 65 677899999999999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhC
Q 015777 379 RGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 379 ~G~~~~~p~~~~l~~~l~~ 397 (400)
.|+.+++|+++++++++++
T Consensus 285 ~G~~~~~~~~~~v~~~~~~ 303 (309)
T 1v1a_A 285 RGDHEGAPYREDLEVLLKA 303 (309)
T ss_dssp STTTTTCCCHHHHTTCC--
T ss_pred CCCCcCCCCHHHHHHHHhh
Confidence 9998888999999887654
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=389.62 Aligned_cols=301 Identities=34% Similarity=0.533 Sum_probs=259.2
Q ss_pred CCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
|++|+|+|++++|++... ...+...+||++.|+|++|+|||.++.++|. +|+|.
T Consensus 24 m~~ilviG~~~~D~~~~~-------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG~D~ 77 (339)
T 1tyy_A 24 MNKVWVIGDASVDLVPEK-------QNSYLKCPGGASANVGVCVARLGGECGFIGC-------------------LGDDD 77 (339)
T ss_dssp -CCEEEESCCEEEEEECS-------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------ECSSH
T ss_pred cCCEEEECcceeEEeccC-------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEe-------------------eCCCH
Confidence 358999999999999863 3356778999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+|+++++.|+++||+++++.+.++.+|+++++.++++|+|++.+++..+++..++++ ..+.+++++++|++++.+..+
T Consensus 78 ~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~ 155 (339)
T 1tyy_A 78 AGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDR 155 (339)
T ss_dssp HHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSH
T ss_pred HHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCc
Confidence 999999999999999999998888899999998888899998887655677666655 235678899999988766566
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g 299 (400)
.+.+.+.++++.++++|+++++||+++..+|.+.+.+.+.+.++++++|++++|++|++.|++..+. ++.++++++.|
T Consensus 156 ~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~--~~~~~~l~~~g 233 (339)
T 1tyy_A 156 PAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDARYYLRDLG 233 (339)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSG--GGGSSTTGGGT
T ss_pred ccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHHcC
Confidence 6678888999999999999999999988888766667777888999999999999999999987643 34556777889
Q ss_pred CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC-----CccccchHHHHHHHHHHHHHHHH
Q 015777 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-----FSLLQKEDQLRDALRFANACGAL 374 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g-----~~~~~~~~~l~~al~~A~a~Aa~ 374 (400)
++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++| .+ +++|+++|+++|++
T Consensus 234 ~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~ 306 (339)
T 1tyy_A 234 CDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAM 306 (339)
T ss_dssp CSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHH
Confidence 9999999999999999888888999999999999999999999999999997 56 99999999999999
Q ss_pred HhcccCCCCCCCCHHHHHHHHhC
Q 015777 375 TVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 375 ~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++++.|+.+++|+++++++++++
T Consensus 307 ~v~~~G~~~~~p~~~ev~~~l~~ 329 (339)
T 1tyy_A 307 AVTAKGAMTALPFPDQLNTFLSS 329 (339)
T ss_dssp GGGSSSTTTTCCCHHHHHHHHC-
T ss_pred HhCCCCCCCCCCCHHHHHHHHhc
Confidence 99999998889999999998865
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=375.54 Aligned_cols=304 Identities=28% Similarity=0.441 Sum_probs=265.8
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
++|+|+|++++|++....+. ..+...+...+||++.|+|++|+|||.++.++|. +|+|.+
T Consensus 2 ~~v~viG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------vG~D~~ 61 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAK-------------------VGDDEF 61 (311)
T ss_dssp CEEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------EESSHH
T ss_pred CCEEEECCceEEEecCCCCc-ccccceeeecCCChHHHHHHHHHHCCCceEEEEE-------------------eCCCHH
Confidence 57999999999999843332 2245667889999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCC--eeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI- 217 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~--r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~- 217 (400)
|+++++.|+++||+++++...++.+|+.+++.++++|+ |++.+++..++...+++++++.+.+++++++|++++...
T Consensus 62 g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 141 (311)
T 2dcn_A 62 GYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAI 141 (311)
T ss_dssp HHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHS
T ss_pred HHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCccccc
Confidence 99999999999999999988888899999999988898 888887766677778888887778899999999887552
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
.+.+.+.+.++++.+++. ++||+.+..+|. .+..++.+.++++ ++|++++|++|++.|++.. +.++.++++
T Consensus 142 ~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~--~~~~~~~~l 214 (311)
T 2dcn_A 142 SSTAKEAVYKAFEIASNR----SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGES--DPDKAAKAF 214 (311)
T ss_dssp CHHHHHHHHHHHHHCSSE----EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCC--CHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHh----CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCC--CHHHHHHHH
Confidence 445567777888777654 899999888886 5556677788999 9999999999999999874 345677888
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++. ++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 215 ~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~ 286 (311)
T 2dcn_A 215 SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLN 286 (311)
T ss_dssp TTT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHH
T ss_pred HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 888 999999999999999998888899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAPV 399 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~~ 399 (400)
+++.|+.+++|++++++++++++.
T Consensus 287 v~~~G~~~~~~~~~~v~~~~~~~~ 310 (311)
T 2dcn_A 287 VMIRGDQENLPTTKDIETFLREMK 310 (311)
T ss_dssp TTSSSSSTTCCCHHHHHHHHHHC-
T ss_pred hccCCCCCCCCCHHHHHHHHHhcc
Confidence 999999888999999999988753
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-48 Score=376.99 Aligned_cols=305 Identities=24% Similarity=0.340 Sum_probs=259.1
Q ss_pred CCcEEEEccceeecccCcCCCCcc-----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~-----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
+++|+|||++++|++......... ....+...+||++.|+|++|++||.++.++|.
T Consensus 5 ~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~------------------- 65 (325)
T 3h49_A 5 NLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSR------------------- 65 (325)
T ss_dssp CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECE-------------------
T ss_pred CCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEE-------------------
Confidence 468999999999996443211100 11356789999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.++++++++|+|+++++++ .+...++.++++.+.+.+++++|++++
T Consensus 66 vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (325)
T 3h49_A 66 IGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN-GSLWKLNIDDVDFARFSQAKLLSLASI 144 (325)
T ss_dssp EESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTT-SHHHHCCGGGCCGGGGGGCSEEEEEEE
T ss_pred ECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccC-cccccCChhhcChhhhccCCEEEEecc
Confidence 9999999999999999999999998888889999999999999999887643 445567777887778899999999886
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYK 294 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~ 294 (400)
.....+..+.+.++++.+++++ .+++|++.++.+|... +.+.++++++|++++|++|++.|+|... .+++++.
T Consensus 145 ~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~----~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~ 217 (325)
T 3h49_A 145 FNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNETL----DDICEALSYVDYLFPNFAEAKLLTGKET--LDEIADC 217 (325)
T ss_dssp TTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCCH----HHHHHHHTTCSEEECBHHHHHHHHTCSS--HHHHHHH
T ss_pred cCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhHH----HHHHHHHhhCCEEecCHHHHHHHhCCCC--HHHHHHH
Confidence 5443344567888999999998 6778887777777543 3456678899999999999999998764 4567788
Q ss_pred HHhCCCcEEEEEecCCcEEEEeCCceEEEccccc-cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
+.+.|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 218 l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa 290 (325)
T 3h49_A 218 FLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAA 290 (325)
T ss_dssp HHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 8899999999999999999999998899999886 8999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 374 LTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++.|+.+++|++++++++++++
T Consensus 291 ~~v~~~G~~~~~p~~~ev~~~l~~~ 315 (325)
T 3h49_A 291 ISVLSVGATTGVKNRKLVEQLLEEY 315 (325)
T ss_dssp HHHTSSSSSSSCSSSHHHHTC----
T ss_pred HHHcccCCCCCCCCHHHHHHHHHhc
Confidence 9999999998999999999988764
|
| >4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-48 Score=377.82 Aligned_cols=310 Identities=18% Similarity=0.266 Sum_probs=255.5
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.||++|++||++++|+.+. .+.|..+...+...+||+++|+|++|+|||.++.++|. ||+
T Consensus 22 ~mm~kv~~~GE~m~~l~p~-~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~-------------------vG~ 81 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQ-QGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATV-------------------VPA 81 (351)
T ss_dssp ---CEEEEECCCEEEEECC-TTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------ECS
T ss_pred hccCCEEEEcceeEEecCC-CCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEE-------------------eCC
Confidence 4677999999999999876 34566678888999999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc-hhhcCCccEEEEccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD-LSLITKAKIFHYGSISL 216 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~-~~~i~~~~~v~~~~~~~ 216 (400)
|.+|+++++.|+++||+++++...++.+|+.+++..+..+++.+.+++...+...+...++. .+++++++++|++++.+
T Consensus 82 D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l 161 (351)
T 4gm6_A 82 NPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITI 161 (351)
T ss_dssp SHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccch
Confidence 99999999999999999999998888666666666667778888888776665555555554 36789999999998765
Q ss_pred -cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 217 -ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 217 -~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
..+...+.+.++++.++++|++++|||++|+.+|. .+..++.+.++++++|++++|++|++.+++...... +..+.+
T Consensus 162 ~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~-~~~~~~ 239 (351)
T 4gm6_A 162 ALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETT-DYYQAM 239 (351)
T ss_dssp HHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCS-CHHHHH
T ss_pred hhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchh-HHHHHH
Confidence 45556788899999999999999999999999995 566788888999999999999999999998765432 222222
Q ss_pred HhC--------CCcEEEEEec--CCcEEEEeCCceEEEccccc-cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 296 FHA--------NLKLLLVTEG--PDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 296 ~~~--------g~~~vvvT~G--~~G~~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
.+. +.+.++++.+ ..|..++..++.++.+++++ ++||||||||+|+|||+++|++|++ +++|
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~a 312 (351)
T 4gm6_A 240 HDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDET 312 (351)
T ss_dssp HHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred HhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHH
Confidence 221 2233444443 44667788888888888776 8999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++||++|++.|+.+.+| .++|++++.+
T Consensus 313 l~~A~aaaal~v~~~Ga~~~~~-~~ev~~~l~~ 344 (351)
T 4gm6_A 313 VKFATAAAGLKHSIHGDINPFD-EKTIADFAAD 344 (351)
T ss_dssp HHHHHHHHHHHTTSSSSSCCCC-HHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhC
Confidence 9999999999999999998876 5789998864
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=373.39 Aligned_cols=292 Identities=27% Similarity=0.340 Sum_probs=257.5
Q ss_pred CCCcEEEEccceeecccCcCCCCcc-----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~-----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
||++|+|+|++++|++..+++.|.. +...+...+||++.|+|++|++||.++.++|.
T Consensus 1 Mm~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~------------------ 62 (304)
T 3ry7_A 1 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITK------------------ 62 (304)
T ss_dssp -CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECE------------------
T ss_pred CCCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEE------------------
Confidence 4578999999999999988887654 34467889999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHY 211 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~ 211 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|+++++++ .++...+++++++. +.+++++++|+
T Consensus 63 -vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~ 139 (304)
T 3ry7_A 63 -IGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVA 139 (304)
T ss_dssp -EESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEE
T ss_pred -eCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999988888899999999999999998877 45666777776653 46889999998
Q ss_pred ccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---H
Q 015777 212 GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---D 288 (400)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~ 288 (400)
++ +.+.+.+.++++.++++|+++++||+... +.+.++++++|++++|++|++.|++....+ .
T Consensus 140 ~~-----~~~~~~~~~~~~~a~~~~~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~ 204 (304)
T 3ry7_A 140 QL-----EVPIPAIISAFEIAKAHGVTTVLNPAPAK----------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSM 204 (304)
T ss_dssp ET-----TSCHHHHHHHHHHHHHTTCEEEEECCSCC----------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHH
T ss_pred cC-----CCCHHHHHHHHHHHHHcCCEEEEeCCccc----------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHH
Confidence 64 23467888999999999999999997532 234557889999999999999999987543 2
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC-CccccchHHHHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-FSLLQKEDQLRDALRF 367 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g-~~~~~~~~~l~~al~~ 367 (400)
.+.++++++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++| ++ +++|+++
T Consensus 205 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~ 277 (304)
T 3ry7_A 205 KDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDF 277 (304)
T ss_dssp HHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHH
Confidence 456678888999999999999999999988899999999999999999999999999999999 99 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHH
Q 015777 368 ANACGALTVMERGAIPALPTREAVLN 393 (400)
Q Consensus 368 A~a~Aa~~v~~~G~~~~~p~~~~l~~ 393 (400)
|+++|++++++.|+.+++|+++|+++
T Consensus 278 A~~~aa~~~~~~G~~~~~p~~~ev~~ 303 (304)
T 3ry7_A 278 GNKASSLTVQKHGAQASIPLLEEVNQ 303 (304)
T ss_dssp HHHHHHTTSCCCCTGGGCCCHHHHHT
T ss_pred HHHHHHHHhCCCCccccCCCHHHHhh
Confidence 99999999999999989999999985
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=370.74 Aligned_cols=297 Identities=34% Similarity=0.565 Sum_probs=260.7
Q ss_pred CCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
|++|+|+|++++|++...++. ..+...+...+||++.|+|++|++||.++.++|. +|+|.
T Consensus 1 M~~v~viG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG~D~ 60 (313)
T 3ewm_A 1 MSLIASIGELLIDLISVEEGD-LKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISK-------------------VGNDP 60 (313)
T ss_dssp -CEEEEESCCEEEEEESSSSC-TTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEE-------------------EESSH
T ss_pred CCcEEEECceeeeeecCCCCC-cccccceeecCCCHHHHHHHHHHHCCCCeEEEEE-------------------eCCCH
Confidence 468999999999999875442 2356678899999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+|+++++.|+++||+++++.+.++.+|+++++.++. |+++++++. ..+...+++++++.+.+++++++|++++.+..+
T Consensus 61 ~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~-~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~ 138 (313)
T 3ewm_A 61 FGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYD-DVAYFNMTLNDINWDIVEEAKIVNFGSVILARN 138 (313)
T ss_dssp HHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECC-SSGGGCCCGGGCCHHHHHHCSEEEEESGGGGST
T ss_pred HHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeec-cCHHHhCChhhCCHHHhCCCCEEEEcCcccCCc
Confidence 999999999999999999988888899999998765 999988873 345567888888877888999999999877667
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCC-ChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWP-SADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~ 298 (400)
.+.+.+.++++.++ .++++++||+++..+|. ..+.+.+.+.++++++|++++|++|++.|++.... ..
T Consensus 139 ~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~----------~~ 207 (313)
T 3ewm_A 139 PSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE----------VK 207 (313)
T ss_dssp THHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC----------CC
T ss_pred chHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc----------cc
Confidence 77788889999888 47999999999888887 55667788888999999999999999998875432 13
Q ss_pred CCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH--cCCccccchHHHHHHHHHHHHHHHHHh
Q 015777 299 NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS--TDFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 299 g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~--~g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
+.+.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|+ +|++ +++|+++|+++|+++|
T Consensus 208 ~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v 280 (313)
T 3ewm_A 208 GSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALST 280 (313)
T ss_dssp CSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHT
T ss_pred CceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHH
Confidence 466789999999999999998999999999999999999999999999999 9999 9999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHhC
Q 015777 377 MERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 377 ~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++.|+.+ +|++++|++++++
T Consensus 281 ~~~G~~~-~p~~~ev~~~l~~ 300 (313)
T 3ewm_A 281 QKRGAWS-TPRKDELLKYKEA 300 (313)
T ss_dssp TSCSSCC-CCCHHHHTTSHHH
T ss_pred ccCCCCC-CCCHHHHHHHHHH
Confidence 9999964 8999999988754
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=367.45 Aligned_cols=286 Identities=25% Similarity=0.281 Sum_probs=247.3
Q ss_pred CCccCCCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeee
Q 015777 53 ETKETRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVI 128 (400)
Q Consensus 53 ~~~~~~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~ 128 (400)
+++..+||++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|++||.++.++|.
T Consensus 12 ~~~~~~mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~------------- 78 (310)
T 3go6_A 12 ETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGA------------- 78 (310)
T ss_dssp -------CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------
T ss_pred hhccccccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEE-------------
Confidence 3344467889999999999999988877654 34567889999999999999999999999999
Q ss_pred ccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccE
Q 015777 129 ILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKI 208 (400)
Q Consensus 129 ~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~ 208 (400)
+|+|.+|+++++.|+++||+++++... +.+|+.+++.++++|+|+++.++ ++...++ ++ .+.++++++
T Consensus 79 ------vG~D~~g~~i~~~L~~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~--~~-~~~l~~~~~ 146 (310)
T 3go6_A 79 ------FGDDPAAAQLRAHLRANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAP--GANAHLT--PV-PSAVANCDV 146 (310)
T ss_dssp ------ECSSHHHHHHHHHHHHTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEEC--GGGGGCC--CC-TTTTTTCSE
T ss_pred ------ECCCHHHHHHHHHHHHcCCccceeEec-CCCCCEEEEEEcCCCCEEEEecC--ChhhhHH--HH-HHHhhcCCE
Confidence 999999999999999999999999754 45999999999999999998874 4554555 44 467889999
Q ss_pred EEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH
Q 015777 209 FHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD 288 (400)
Q Consensus 209 v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~ 288 (400)
+|+++. .+.+.+.++++.+++.|+++++|++++.. .++.+.++++++|++++|++|++.|++.
T Consensus 147 v~~~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~----- 209 (310)
T 3go6_A 147 LLTQLE-----IPVATALAAARAAQSADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP----- 209 (310)
T ss_dssp EEECSS-----SCHHHHHHHHHHHHHTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC-----
T ss_pred EEECCC-----CCHHHHHHHHHHHHHcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC-----
Confidence 998752 34677889999999999999999986432 2455667889999999999999999875
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc----CCccccchHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST----DFSLLQKEDQLRDA 364 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~----g~~~~~~~~~l~~a 364 (400)
++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++ |++ +++|
T Consensus 210 -----------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a 271 (310)
T 3go6_A 210 -----------PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRA 271 (310)
T ss_dssp -----------CSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHH
T ss_pred -----------CCEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHH
Confidence 689999999999999999989999999999999999999999999999999 877 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|+++|++.|+.+++|+++|+++++++.
T Consensus 272 ~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 305 (310)
T 3go6_A 272 LRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 305 (310)
T ss_dssp HHHHHHHHHHHTTSSCSTTCCCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHhc
Confidence 9999999999999999998999999999999874
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=366.41 Aligned_cols=297 Identities=25% Similarity=0.336 Sum_probs=256.5
Q ss_pred CCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
.++++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|+|||.++.++|.
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~------------------ 63 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIAC------------------ 63 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEE------------------
T ss_pred CCCCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEE------------------
Confidence 34568999999999999988877654 23467789999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHY 211 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~ 211 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|++++.++ .+++..+++++++. +.+++++++|+
T Consensus 64 -vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~ 140 (309)
T 1rkd_A 64 -TGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLM 140 (309)
T ss_dssp -EESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEE
T ss_pred -ECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEE
Confidence 99999999999999999999999988788899999999998899998876 45556677776653 46778999998
Q ss_pred ccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---H
Q 015777 212 GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---D 288 (400)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~ 288 (400)
++. .+.+.+.++++.+++.|+++++||+++.. | ..++++++|++++|++|++.|++....+ .
T Consensus 141 ~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-~---------~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~ 205 (309)
T 1rkd_A 141 QLE-----SPLESVMAAAKIAHQNKTIVALNPAPARE-L---------PDELLALVDIITPNETEAEKLTGIRVENDEDA 205 (309)
T ss_dssp CSS-----SCHHHHHHHHHHHHHTTCEEEECCCSCCC-C---------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHcCCEEEEECCcccc-c---------hHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHH
Confidence 642 23467788899999999999999987532 1 2347789999999999999999875432 2
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFA 368 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A 368 (400)
.+.++++++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|
T Consensus 206 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a 278 (309)
T 1rkd_A 206 AKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFA 278 (309)
T ss_dssp HHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHH
Confidence 45567888899999999999999999998888899999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 369 NACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 369 ~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|++++++.|+.+.+|+++++++++++
T Consensus 279 ~~~aa~~~~~~G~~~~~p~~~ev~~~~~~ 307 (309)
T 1rkd_A 279 HAAAAIAVTRKGAQPSVPWREEIDAFLDR 307 (309)
T ss_dssp HHHHHHHHTSSSSGGGCCCHHHHHHHHHT
T ss_pred HHHHHHHcCCCCccCCCCCHHHHHHHHhc
Confidence 99999999999998788999999998864
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-47 Score=367.67 Aligned_cols=297 Identities=25% Similarity=0.405 Sum_probs=259.7
Q ss_pred CCCCCCCccCCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHc--CCCceeeecccccccccce
Q 015777 48 GDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL--GGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 48 ~~~~~~~~~~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larL--G~~~~~i~~~~~~~~~~~~ 125 (400)
++++... +|++|+|||++++|++.... ...+...+||++.|+|++|+|| |.++.++|.
T Consensus 15 ~~~y~~~----~m~~i~viG~~~iD~~~~~~------~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~---------- 74 (328)
T 4e69_A 15 TENLYFQ----SMMHILSIGECMAELAPADL------PGTYRLGFAGDTFNTAWYLARLRPESRISYFSA---------- 74 (328)
T ss_dssp CBCSSCB----SSCEEEEESCCEEEEEECSS------TTEEEEEEECHHHHHHHHHHHHCTTSEEEEECE----------
T ss_pred ccccccc----cCCcEEEecCcEEEEecCCC------CCceEEecCCHHHHHHHHHHhcCCCCcEEEEEe----------
Confidence 4455544 45789999999999998621 1467789999999999999999 899999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccc-cCCccccchhhcC
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM-LLQEAELDLSLIT 204 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~-~l~~~~l~~~~i~ 204 (400)
+|+|.+|+++++.|+++||+++++.+.++.+|+.+++.++ +|+|+++++++..... .++.+++..+.++
T Consensus 75 ---------vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (328)
T 4e69_A 75 ---------IGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMA 144 (328)
T ss_dssp ---------ECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHT
T ss_pred ---------eCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhc
Confidence 9999999999999999999999999888889999999999 9999999886654432 2344444457789
Q ss_pred CccEEEEccccc--cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccC
Q 015777 205 KAKIFHYGSISL--ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282 (400)
Q Consensus 205 ~~~~v~~~~~~~--~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~ 282 (400)
++|++|++++.+ ..+...+.+.++++.+++.++++++||++++.+|.+.+..++.+.++++++|++++|++|++.|+|
T Consensus 145 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 224 (328)
T 4e69_A 145 RADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFG 224 (328)
T ss_dssp TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcC
Confidence 999999998654 235567788899999999999999999988888977777888888999999999999999999998
Q ss_pred CCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccc-ccccCCCCchHHHHHHHHHHHHcCCccccchHHH
Q 015777 283 GEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361 (400)
Q Consensus 283 ~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l 361 (400)
.. +.+++++.+.++|++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|+|+++|++|++ +
T Consensus 225 ~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l 295 (328)
T 4e69_A 225 DA--GPDATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------L 295 (328)
T ss_dssp CS--SHHHHHHHHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------H
T ss_pred CC--CHHHHHHHHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------H
Confidence 76 34677888999999999999999999999999899999986 79999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHhcccCCCC
Q 015777 362 RDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 362 ~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
++|+++|+++|+++|++.|+.+
T Consensus 296 ~~a~~~A~~~aa~~v~~~Ga~~ 317 (328)
T 4e69_A 296 ETAIAAAAALAGQVVQGKGALV 317 (328)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSC
T ss_pred HHHHHHHHHHHHHHHccCCCcC
Confidence 9999999999999999999865
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=370.28 Aligned_cols=293 Identities=24% Similarity=0.308 Sum_probs=256.4
Q ss_pred CCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
++++|+|||++++|++..+++.|.. ....+...+||++.|+|++|++||.++.++|.
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~------------------- 88 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGA------------------- 88 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEE-------------------
Confidence 3458999999999999888776543 23456788999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
+|+|.+|+++++.|+++||+++++.+.++.+|+.++++++++|+|+++++++ ....++++++..+.+++++++|++++
T Consensus 89 vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~--~~~~~~~~~l~~~~l~~~~~v~~~~~ 166 (343)
T 2rbc_A 89 VGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYD--HRLHEKKRACTPEDIALFDAVLVDVR 166 (343)
T ss_dssp EESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECC--GGGGSSCCCCCHHHHTTCSEEEECSS
T ss_pred eCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCC--CcccCChhHhcHhhhCCCCEEEEcCC
Confidence 9999999999999999999999998888889999999999899999877644 44556667776677889999999875
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh-hhccCcEEEcCHhHHhcccCCCCCcHHHHHH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS-IWETADIIKISEEEISFLTQGEDPYDDAVVY 293 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~-ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 293 (400)
. .+...++++.+++.++++++||... .+.+.+ +++++|++++|++|++.|++.. +.+++++
T Consensus 167 ~------~~~~~~~~~~a~~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~--~~~~~~~ 228 (343)
T 2rbc_A 167 W------PELALDVLTVARALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLE--TVKDMLP 228 (343)
T ss_dssp S------HHHHHHHHHHHHHTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCS--SHHHHHH
T ss_pred C------HHHHHHHHHHHHHCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCC--CHHHHHH
Confidence 3 2467788899999999999999631 234555 7889999999999999999875 3456778
Q ss_pred HHHhCCC-cEEEEEecCCcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHH
Q 015777 294 KLFHANL-KLLLVTEGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 294 ~l~~~g~-~~vvvT~G~~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a 370 (400)
.+.+.|+ +.|+||+|++|++++.++ +.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|++
T Consensus 229 ~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~ 301 (343)
T 2rbc_A 229 VLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSV 301 (343)
T ss_dssp HHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHH
T ss_pred HHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHH
Confidence 8888999 999999999999999887 78899999999999999999999999999999999 9999999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 371 CGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 371 ~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+|++++++.|+.+++|+++++++++++
T Consensus 302 ~aa~~v~~~G~~~~~p~~~ev~~~l~~ 328 (343)
T 2rbc_A 302 AAALKCTVFGGRIGAPTREETEEAMRQ 328 (343)
T ss_dssp HHHHHHTSSSGGGGCCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCccCCCCHHHHHHHHHh
Confidence 999999999998778999999998865
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=368.58 Aligned_cols=291 Identities=23% Similarity=0.326 Sum_probs=248.7
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcC----CCceeeecccccccccceeeeccCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLG----GSSAFIGKTTLFCFYEHVKVIILPC 132 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG----~~~~~i~~~~~~~~~~~~~~~~~~~ 132 (400)
|.|+++|+|||++++|++... ..+...+||++.|+|++|+||| .++.++|.
T Consensus 1 m~m~~~i~viG~~~~D~~~~~--------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~----------------- 55 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKG--------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTA----------------- 55 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECE-----------------
T ss_pred CCccCceeeechhhhhhccCC--------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEE-----------------
Confidence 345568999999999998753 3467899999999999999999 89999999
Q ss_pred CcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCC-ccccCCccccc--hhhcCCccEE
Q 015777 133 PKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPS-ADMLLQEAELD--LSLITKAKIF 209 (400)
Q Consensus 133 ~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~-~~~~l~~~~l~--~~~i~~~~~v 209 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|+|+++++++.. +...+++++++ .+.+++++++
T Consensus 56 --vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 133 (319)
T 3lhx_A 56 --LGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYL 133 (319)
T ss_dssp --ECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEE
T ss_pred --eCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEE
Confidence 999999999999999999999999988888999999999989999999886543 33345554443 2578899999
Q ss_pred EEccccc--cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc
Q 015777 210 HYGSISL--ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287 (400)
Q Consensus 210 ~~~~~~~--~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~ 287 (400)
|++++.+ ..+.+.+.+.++++.++++|+++++||+++..+|.+.+...+.+.++++++|++++|++|++.|+|.. +
T Consensus 134 ~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~--~ 211 (319)
T 3lhx_A 134 YLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQ--P 211 (319)
T ss_dssp EEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCC--C
T ss_pred EEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCC--C
Confidence 9988654 23455678889999999999999999999888898877888888899999999999999999999874 3
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceE-EEccc---cccccCCCCchHHHHHHHHHHHHcCCccccchHHHHH
Q 015777 288 DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSG-RVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRD 363 (400)
Q Consensus 288 ~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~-~vpa~---~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~ 363 (400)
.++++++++++|++.|+||+|++|++++++++.+ ++|++ +++++|||||||+|+|||+++|++|++ +++
T Consensus 212 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~ 284 (319)
T 3lhx_A 212 VEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AEN 284 (319)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHH
T ss_pred HHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHH
Confidence 4677888999999999999999999999988655 88986 678999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHhcccCCCC
Q 015777 364 ALRFANACGALTVMERGAIP 383 (400)
Q Consensus 364 al~~A~a~Aa~~v~~~G~~~ 383 (400)
|+++|+++|++++++.|+.+
T Consensus 285 a~~~A~~~aa~~v~~~Ga~~ 304 (319)
T 3lhx_A 285 AAKRGHLTASTVIQYRGAII 304 (319)
T ss_dssp HHHHHHHHHHHHTTSSSSSC
T ss_pred HHHHHHHHHHhhhccCCCcC
Confidence 99999999999999999864
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-47 Score=368.38 Aligned_cols=299 Identities=19% Similarity=0.210 Sum_probs=257.0
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCC---CCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~---~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
.++++|+|+|++++|++..+++.|.... ..+...+||++.|+|++|++||.++.++|.
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~------------------- 64 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSI------------------- 64 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECE-------------------
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEE-------------------
Confidence 4567899999999999998887665421 146789999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYG 212 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~ 212 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.++++++++|+|.+.+.. ++....++++.++ .+.+..+++++++
T Consensus 65 vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (328)
T 3kzh_A 65 LGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIAD-MKSIGAMNTDFIDSKREIFENAEYTVLD 143 (328)
T ss_dssp ECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHHHTHHHHHTCSEEEEE
T ss_pred ecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEc-hhhhhhCCHHHHHHHHHhhccCCEEEEe
Confidence 999999999999999999999999888888999999999999999886542 4455556665554 2567899999987
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---H
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---D 289 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~ 289 (400)
+.. + +.+..+++ +++.++++++||+. ....+.+.++++++|++++|++|++.|++....+. +
T Consensus 144 ~~~-----~-~~~~~l~~-a~~~~~~v~~D~~~--------~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~ 208 (328)
T 3kzh_A 144 SDN-----P-EIMEYLLK-NFKDKTNFILDPVS--------AEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLI 208 (328)
T ss_dssp SSC-----H-HHHHHHHH-HHTTTSEEEEECCS--------HHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHH
T ss_pred CCc-----H-HHHHHHHH-HhhcCCcEEEEeCC--------HHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHH
Confidence 632 2 56666666 88899999999963 22345577789999999999999999999765432 4
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
++++.+++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+
T Consensus 209 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~ 281 (328)
T 3kzh_A 209 KASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAM 281 (328)
T ss_dssp HHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 5567888889999999999999999998888999999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|+++|++.|+.++.|+++++++++++.
T Consensus 282 a~aa~~v~~~G~~~~~~~~~~v~~~~~~~ 310 (328)
T 3kzh_A 282 TMSNITISHEETIHPDMALDTVLAKLEKT 310 (328)
T ss_dssp HHHHHHHTSSSSSCTTCSHHHHHHHHHTC
T ss_pred HHHHHHhcCCCCCCCcCCHHHHHHHhhhc
Confidence 99999999999998999999999999864
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=369.71 Aligned_cols=300 Identities=23% Similarity=0.328 Sum_probs=260.3
Q ss_pred CCcEEEEccceeecccCcCCC-------CccC---------------CCCceecCCChHHHHHHHHHHcCCCceeeeccc
Q 015777 60 SPLVVCFGEMLIDFVPTVSGL-------SLAE---------------SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTT 117 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~-------~~~~---------------~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~ 117 (400)
+++|+|+|++++|++..++.. +... .......+||++.|+|+++++||.++.++|.
T Consensus 25 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~-- 102 (352)
T 4e3a_A 25 RFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGN-- 102 (352)
T ss_dssp SEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECC--
T ss_pred cccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEE--
Confidence 468999999999999988752 2111 1234678999999999999999999999999
Q ss_pred ccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccc
Q 015777 118 LFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 197 (400)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~ 197 (400)
+|+|.+|+++++.|++.||+++++...++.+|+.++++++++|+|++..+ .++...+++++
T Consensus 103 -----------------vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~ 163 (352)
T 4e3a_A 103 -----------------VAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPED 163 (352)
T ss_dssp -----------------CCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGG
T ss_pred -----------------ECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhh
Confidence 99999999999999999999999988777899999999999999999877 45667788888
Q ss_pred cchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHh
Q 015777 198 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEE 275 (400)
Q Consensus 198 l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~ 275 (400)
++.+.+++++++|++++....+...+.+.++++.++++|+++++|++... ..+..++.+.++++ ++|++++|++
T Consensus 164 ~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~ 239 (352)
T 4e3a_A 164 VEADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQ 239 (352)
T ss_dssp CCHHHHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHH
T ss_pred CCHHHHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHH
Confidence 88888999999999988765666778889999999999999999996311 12345667788898 8999999999
Q ss_pred HHhcccCCCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 276 EISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 276 E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
|++.|++..+ .+++++.+.. +++.|+||+|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|++|++
T Consensus 240 Ea~~l~g~~~--~~~a~~~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~- 315 (352)
T 4e3a_A 240 EALSLYQTDD--FEEALNRIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS- 315 (352)
T ss_dssp HHHHHTTCSC--HHHHHHHHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHhCCCC--HHHHHHHHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-
Confidence 9999999754 3456666654 7899999999999999999999999999986 899999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 394 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~ 394 (400)
+++|+++|+++|+++|++.|+.+.+|.++.+++.
T Consensus 316 ------l~~a~~~A~~aAa~~v~~~G~~~~~~~~~~~~~~ 349 (352)
T 4e3a_A 316 ------LEDCGKLGCLAAGIVIQQIGPRPMTSLSEAAKQA 349 (352)
T ss_dssp ------HHHHHHHHHHHHHHHTTSSSSSCSSCHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHcCCCCCCCcCHHHHHHHh
Confidence 9999999999999999999999998888777653
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-47 Score=364.23 Aligned_cols=281 Identities=21% Similarity=0.264 Sum_probs=248.1
Q ss_pred CCCcEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
|+|+|+|+|++++|++..+++.|.+. ...+...+||++.|+|++|++||.++.++|.
T Consensus 1 M~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~------------------- 61 (299)
T 3ikh_A 1 MSLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAA------------------- 61 (299)
T ss_dssp -CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECC-------------------
T ss_pred CCceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEE-------------------
Confidence 45789999999999999988877652 3457789999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYG 212 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~ 212 (400)
+|+|.+|+++++.|+++||++++++ .++.+|+.+++.++++|+|+++++ .+++..+++++++ .+.+++++++|++
T Consensus 62 vG~D~~g~~i~~~l~~~gv~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~ 138 (299)
T 3ikh_A 62 TGNDSNGAWIRQQIKNEPLMLLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQ 138 (299)
T ss_dssp CCSSHHHHHHHHHGGGSSCEEESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEEC
T ss_pred ECCCHHHHHHHHHHHHcCCceeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEEC
Confidence 9999999999999999999999985 566799999999999999998876 4566667777665 2567899999987
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHH
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV 292 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~ 292 (400)
+. .+.+...++++.++++|+++++||+.+. +.+.++++++|++++|++|++.|++
T Consensus 139 g~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g---------- 193 (299)
T 3ikh_A 139 GN-----FSLDKTRALFQYARSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP---------- 193 (299)
T ss_dssp SC-----SCHHHHHHHHHHHHHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC----------
T ss_pred CC-----CCHHHHHHHHHHHHHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc----------
Confidence 63 2356788899999999999999997542 3456688999999999999999887
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHH-HHHHHHHcCCccccchHHHHH-HHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVA-GILSQLSTDFSLLQKEDQLRD-ALRFANA 370 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~A-gfl~~l~~g~~~~~~~~~l~~-al~~A~a 370 (400)
.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.| ||+++|++|++ +++ |+++|++
T Consensus 194 -----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~ 261 (299)
T 3ikh_A 194 -----YGVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASR 261 (299)
T ss_dssp -----CSCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHH
T ss_pred -----CCCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 688999999999999999988899999999999999999999999 99999999999 999 9999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 371 CGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 371 ~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+++|++.|+.+++|+++++++++++.
T Consensus 262 ~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 289 (299)
T 3ikh_A 262 AAAITVSRRGTLSAFPGSRELAALLTTD 289 (299)
T ss_dssp HHHHHHHSSSSTTTSCCHHHHHHHHC--
T ss_pred HHHHHhCCCcccccCCCHHHHHHHHHhc
Confidence 9999999999998899999999998763
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-47 Score=362.97 Aligned_cols=289 Identities=26% Similarity=0.379 Sum_probs=249.3
Q ss_pred CcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
++|+++|++++|++..+++.|.. ....+...+||++.|+|++|+|||.++.++|. +|
T Consensus 6 ~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~-------------------vG 66 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSC-------------------VG 66 (302)
T ss_dssp EEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------EC
T ss_pred CcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEE-------------------Ee
Confidence 47999999999999988776553 23457789999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+|.+|+++++.|+++||+++++...++.+|+.+++.++++|++++++++ ++...+++++++. ++++++|+++..
T Consensus 67 ~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~---~~~~~v~~~~~~- 140 (302)
T 2c4e_A 67 YDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLW--GAAKHYKELNPPN---FNTEIVHIATGD- 140 (302)
T ss_dssp TTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEEC--GGGGGGGGCCCCC---CCEEEEEECSSC-
T ss_pred CCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeC--ChhhhCCHhhcCc---ccCCEEEEeCCC-
Confidence 9999999999999999999999887787899999999989999988773 3555566666543 689999987531
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
++...++++.++++| ++++||+.+...|. .+.+.++++++|++++|++|++.|++....+.. +++
T Consensus 141 -----~~~~~~~~~~a~~~g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l~ 205 (302)
T 2c4e_A 141 -----PEFNLKCAKKAYGNN-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID----DYL 205 (302)
T ss_dssp -----HHHHHHHHHHHBTTB-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH----HHH
T ss_pred -----cHHHHHHHHHHHhcC-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH----HHH
Confidence 267788899999999 99999986543332 345667889999999999999999886554332 566
Q ss_pred hCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++ ++.|+||+|++|++++.+++.+++|+++++ ++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 206 ~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~ 277 (302)
T 2c4e_A 206 ER-VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFV 277 (302)
T ss_dssp TT-CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred hc-CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 77 999999999999999988888899999998 999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhC
Q 015777 376 VMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++.|+.+.+|+++++++++++
T Consensus 278 ~~~~G~~~~~p~~~ev~~~~~~ 299 (302)
T 2c4e_A 278 VEAKGCQTNLPTWDKVVERLEK 299 (302)
T ss_dssp TTSSSSSTTCCCHHHHHHHHHH
T ss_pred HccccccccCCCHHHHHHHHHh
Confidence 9999998889999999998865
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=363.54 Aligned_cols=295 Identities=25% Similarity=0.349 Sum_probs=251.6
Q ss_pred CCCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPC 132 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~ 132 (400)
|.++++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|+|||.++.++|.
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~----------------- 83 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCK----------------- 83 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-----------------
T ss_pred ccccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEE-----------------
Confidence 345578999999999999988877654 23457788999999999999999999999999
Q ss_pred CcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEE
Q 015777 133 PKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFH 210 (400)
Q Consensus 133 ~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~ 210 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|+|++++++ +++..+++++++. +.++.+++++
T Consensus 84 --vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~l~~~~~v~ 159 (331)
T 2fv7_A 84 --VGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVA--GANLLLNTEDLRAAANVISRAKVMV 159 (331)
T ss_dssp --EESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEEC--GGGGGCCHHHHHHTHHHHHHCSEEE
T ss_pred --ECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecC--CccccCCHHHHHHHHHhhccCCEEE
Confidence 999999999999999999999999887788999999999988999988873 4555677776643 3567899999
Q ss_pred EccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---
Q 015777 211 YGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY--- 287 (400)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~--- 287 (400)
+++. .+.+.+.++++.+++.++++++||+++...| ..++++++|++++|++|++.|++....+
T Consensus 160 ~~~~-----~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~---------~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~ 225 (331)
T 2fv7_A 160 CQLE-----ITPATSLEALTMARRSGVKTLFNPAPAIADL---------DPQFYTLSDVFCCNESEAEILTGLTVGSAAD 225 (331)
T ss_dssp ECSS-----SCHHHHHHHHHHHHHTTCEEEECCCSCCTTC---------CTHHHHTCSEEEEEHHHHHHHHSSCCCSHHH
T ss_pred EecC-----CCHHHHHHHHHHHHHcCCEEEEeCCcccccc---------hHHHHhcCCEEEeCHHHHHHHhCCCCCChhH
Confidence 8642 2346778889999999999999998753222 2347889999999999999999875432
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHHHHHcC--CccccchHHHHH
Q 015777 288 DDAVVYKLFHANLKLLLVTEGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--FSLLQKEDQLRD 363 (400)
Q Consensus 288 ~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g--~~~~~~~~~l~~ 363 (400)
..+.++++++.|++.|+||+|++|++++.++ +.+++|+++++++|||||||+|.|+|+++|++| ++ +++
T Consensus 226 ~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~ 298 (331)
T 2fv7_A 226 AGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LED 298 (331)
T ss_dssp HHHHHHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHH
Confidence 2456678888999999999999999999887 788999999999999999999999999999999 99 999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 015777 364 ALRFANACGALTVMERGAIPALPTREAVLN 393 (400)
Q Consensus 364 al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~ 393 (400)
|+++|+++|++++++.|+.+.+|+++++++
T Consensus 299 a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~ 328 (331)
T 2fv7_A 299 MLNRSNFIAAVSVQAAGTQSSYPYKKDLPL 328 (331)
T ss_dssp HHHHHHHHHHHHHTSSSGGGGCCCGGGSCG
T ss_pred HHHHHHHHHHHHhCCCCCccCCCCHHHHhh
Confidence 999999999999999999888899988754
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=356.09 Aligned_cols=297 Identities=20% Similarity=0.163 Sum_probs=247.2
Q ss_pred CCcEEEEccceeecccCcCCCCccCC---CCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~~---~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|++|+|+|++++|++..+++.+.+.. ..+...+||++.|+|++|+|||.++.++|. +|
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 63 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAP-------------------RG 63 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------EE
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEe-------------------ec
Confidence 35899999999999988776554321 136788999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch----hhcCCccEEEEc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAKIFHYG 212 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~----~~i~~~~~v~~~ 212 (400)
+|.+|+++++.|+++||++++ ...++.+|+.++++++++|++++.+++. .....++++.++. +.+..++++|++
T Consensus 64 ~D~~G~~l~~~L~~~gV~~~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 141 (317)
T 2nwh_A 64 GDVTGEVVAEAARQAGVEDTP-FTFLDRRTPSYTAILERDGNLVIALADM-DLYKLFTPRRLKVRAVREAIIASDFLLCD 141 (317)
T ss_dssp SSHHHHHHHHHHHHTTCEECC-EEETTSCCCEEEEEECTTSCEEEEEEEC-GGGGGCCHHHHTSHHHHHHHHHCSEEEEE
T ss_pred CCchHHHHHHHHHHcCCCCCC-cccCCCCCceEEEEEcCCCCEEEEEcch-HHHhhCCHHHhhhhhhhhHhccCCEEEEe
Confidence 999999999999999999998 5566779999999999999998876542 3334466655542 457789999986
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHH
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV 292 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~ 292 (400)
+. .+.+.+.++++.+++.|+++++||+. . ...+.+.++++++|++++|++|++.|++.+..+..+.+
T Consensus 142 ~~-----~~~~~~~~~~~~a~~~g~~v~~Dp~~-------~-~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 208 (317)
T 2nwh_A 142 AN-----LPEDTLTALGLIARACEKPLAAIAIS-------P-AKAVKLKAALGDIDILFMNEAEARALTGETAENVRDWP 208 (317)
T ss_dssp TT-----SCHHHHHHHHHHHHHTTCCEEEECCS-------H-HHHGGGTTTGGGCSEEEEEHHHHHHHHC-----CTTHH
T ss_pred CC-----CCHHHHHHHHHHHHhcCCeEEEeCCC-------H-HHHHHHHHHhhhCeEecCCHHHHHHHhCCChhHHHHHH
Confidence 42 23567888999999999999999963 1 12355677889999999999999999987323334567
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCC-ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~-~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.+++.|++.|+||+|++|+++++++ ..+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++
T Consensus 209 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~ 281 (317)
T 2nwh_A 209 NILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAA 281 (317)
T ss_dssp HHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 78888999999999999999998866 46889999999999999999999999999999999 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 372 GALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
|++++++.|+.+.+|++++++++...
T Consensus 282 aa~~v~~~G~~~~~~~~~~v~~~~~~ 307 (317)
T 2nwh_A 282 AAITVQSSFATSQDLSKDSVEAMLGL 307 (317)
T ss_dssp HHHHHSSTTCCGGGCCHHHHHHHHTT
T ss_pred HHHHHcCCCCCCCCCCHHHHHhHhhh
Confidence 99999999998888999999986443
|
| >3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-46 Score=367.60 Aligned_cols=296 Identities=18% Similarity=0.230 Sum_probs=253.0
Q ss_pred CCcEEEEccceeecccCcCC--------------------CCcc----CCCCceecCCChHHHHHHHHHHc---CCCcee
Q 015777 60 SPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL---GGSSAF 112 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~N~A~~larL---G~~~~~ 112 (400)
+.+|+++|++++|++..++. .|.. ........+||++.|+|+++++| |.++.+
T Consensus 24 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ 103 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 103 (370)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEE
Confidence 36799999999999999884 3322 34577889999999999999999 999999
Q ss_pred eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCcccc
Q 015777 113 IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 192 (400)
Q Consensus 113 i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~ 192 (400)
+|. ||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|+++.+ .+++..
T Consensus 104 ig~-------------------vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ga~~~ 161 (370)
T 3vas_A 104 VGC-------------------IGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACD 161 (370)
T ss_dssp EEE-------------------ECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGG
T ss_pred EEE-------------------EcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--cchhhh
Confidence 999 9999999999999999999999987756779999999998 899999876 456667
Q ss_pred CCccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCc
Q 015777 193 LQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETAD 268 (400)
Q Consensus 193 l~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~d 268 (400)
+++++++. +.+++++++|++++... .+.+.+.++++.++++|+++++|+.. +.| .+..++.+.++++++|
T Consensus 162 l~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~--~~~--~~~~~~~l~~ll~~~d 235 (370)
T 3vas_A 162 LSLAHIEQPHVWSLVEKAQVYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSA--PFL--SQFNTKEVDEMISYSN 235 (370)
T ss_dssp CCHHHHTSHHHHHHHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCC--HHH--HHHCHHHHHHHHTTCS
T ss_pred CCHHHcCchhhHHHHhhCCEEEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCc--HHH--HHHHHHHHHHHHhhCC
Confidence 88777764 56889999999987543 44678889999999999999999852 111 1233566778899999
Q ss_pred EEEcCHhHHhcccCCCC---CcHHHHHHHHHhC-------CCcEEEEEecCCcEEEEe--CCceEEEccccc---cccCC
Q 015777 269 IIKISEEEISFLTQGED---PYDDAVVYKLFHA-------NLKLLLVTEGPDGCRYYT--KDFSGRVQGLKV---EAVDA 333 (400)
Q Consensus 269 vl~~N~~E~~~l~~~~~---~~~~~~~~~l~~~-------g~~~vvvT~G~~G~~~~~--~~~~~~vpa~~v---~vvDt 333 (400)
++++|++|++.|++... .+.+++++++.++ +++.||||+|++|++++. +++.+++|++++ ++|||
T Consensus 236 il~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDt 315 (370)
T 3vas_A 236 IVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDT 315 (370)
T ss_dssp EEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCC
T ss_pred EEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCC
Confidence 99999999999987643 3345677788875 999999999999999999 788899999987 89999
Q ss_pred CCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 015777 334 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 392 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~ 392 (400)
|||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+. +|+++++.
T Consensus 316 tGAGDaF~ag~l~~l~~g~~-------l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 316 NGAGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp TTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred CChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 99999999999999999999 9999999999999999999984 58887764
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=353.47 Aligned_cols=291 Identities=22% Similarity=0.309 Sum_probs=250.3
Q ss_pred CCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCC-ceeeecccccccccceeeeccCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGS-SAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~-~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
|-++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|+|||.+ +.++|.
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~------------------ 74 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTC------------------ 74 (311)
T ss_dssp CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEE------------------
T ss_pred ccCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEE------------------
Confidence 5578999999999999998887654 24567788999999999999999999 999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS 213 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~ 213 (400)
+|+|.+|+++++.|+++|| ++.+.++.+|+.+++.++++|++++++++ ++...+++++++.+.+++++++++++
T Consensus 75 -vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~~~~~v~~~~ 148 (311)
T 1vm7_A 75 -IGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFP--GANAELKKELIDWNTLSESDILLLQN 148 (311)
T ss_dssp -ECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEEC--GGGGGCCGGGCCHHHHTTCSEEEECS
T ss_pred -ECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEec--CccccCCHHHhChhhcccCCEEEEeC
Confidence 9999999999999999999 67776777999999999988999998874 56666787777667788999999875
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC---CCcHHH
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDA 290 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~---~~~~~~ 290 (400)
.. +.+.+. +.+++.++++++||+++. +.+.++++++|++++|++|++.|++.. ..+..+
T Consensus 149 ~~-----~~~~~~---~~a~~~~~~v~~Dp~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 210 (311)
T 1vm7_A 149 EI-----PFETTL---ECAKRFNGIVIFDPAPAQ----------GINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK 210 (311)
T ss_dssp SS-----CHHHHH---HHHHHCCSEEEECCCSCT----------TCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHH
T ss_pred CC-----CHHHHH---HHHHHcCCEEEEeCcchh----------hhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHH
Confidence 32 223333 337888999999998632 233457889999999999999998752 133456
Q ss_pred HHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHH
Q 015777 291 VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 291 ~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a 370 (400)
.++++.++|++.|+||+|++|++++.+++.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|++
T Consensus 211 ~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~ 283 (311)
T 1vm7_A 211 AAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTA 283 (311)
T ss_dssp HHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHH
Confidence 778888999999999999999999988888899999999999999999999999999999999 9999999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 371 CGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 371 ~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+.++++.|+.+.+|++++++++++++
T Consensus 284 ~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 311 (311)
T 1vm7_A 284 AAAISVTRLGAQSSIPAREEVEAFLKNL 311 (311)
T ss_dssp HHHHHTTSSSSGGGCCCHHHHHHHHHTC
T ss_pred HHHHHhCcCCccccCCCHHHHHHHHhcC
Confidence 9999999999987899999999998764
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=348.88 Aligned_cols=287 Identities=25% Similarity=0.346 Sum_probs=236.0
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+++|+|+|++++|+++. ...+||++.|+|++++|||.++.++|. +|+|
T Consensus 2 m~~~v~viG~~~~D~~p~------------~~~~GG~~~N~A~~la~LG~~~~~~~~-------------------vG~D 50 (296)
T 2qhp_A 2 MNNIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSA-------------------VGND 50 (296)
T ss_dssp -CCEEEEESCCEEEEETT------------EEEEECHHHHHHHHHHHTTCEEEEEEE-------------------EESS
T ss_pred CcceEEEEchhheEecCC------------CCCCCCHHHHHHHHHHHcCCCeeEEEE-------------------eCCC
Confidence 446899999999999842 368999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccC
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT 218 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~ 218 (400)
.+|+++++.|+++|| +++.+.++.+|+++++.++++|+|++.++++ .....+..++...+.++++|++|++++....
T Consensus 51 ~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~ 127 (296)
T 2qhp_A 51 ELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFGSLAQRN 127 (296)
T ss_dssp HHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEECSGGGSS
T ss_pred hHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEECChHhcC
Confidence 999999999999999 7787777789999999888889988877643 2223343332233567899999999876666
Q ss_pred chhHHHHHHHHHHHhh-CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC---CCcHHHHHHH
Q 015777 219 EPCKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDAVVYK 294 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~ 294 (400)
+.+.+.+.++++.+++ +++++++||+.+...|. .+.+.++++++|++++|++|++.|++.. ..+.++++++
T Consensus 128 ~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 202 (296)
T 2qhp_A 128 EVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWI 202 (296)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHH
Confidence 6667788888988887 69999999998877663 2455667889999999999999998743 2344567778
Q ss_pred HHhC-CCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHA-NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~-g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
++++ |++.|+||+|++|++++++++.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|+++|+
T Consensus 203 l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa 275 (296)
T 2qhp_A 203 LLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSA 275 (296)
T ss_dssp HHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 8775 9999999999999999998888999999999999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHH
Q 015777 374 LTVMERGAIPALPTREAVLN 393 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~ 393 (400)
.++++.|+.+.+| +++.+
T Consensus 276 ~~v~~~G~~~~~~--~~l~~ 293 (296)
T 2qhp_A 276 YVCTQSGAMPELP--VILKD 293 (296)
T ss_dssp HHHTSSSSSCCCC--HHHHG
T ss_pred HHHcCCCCCCCCc--HHHHh
Confidence 9999999987654 44443
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=349.22 Aligned_cols=309 Identities=22% Similarity=0.302 Sum_probs=255.8
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
.-|+|++||+.+.++... ...+......+...+||++.|+|++|++||.++.++|. +|+|
T Consensus 11 ~~~~~~~~ge~l~~~~~~-~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D 70 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPP-DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTK-------------------LPNN 70 (351)
T ss_dssp CCCEEEEESCCEEEEECS-TTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEE-------------------ECSS
T ss_pred ccceEEEechhhheecCC-CCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEE-------------------eCCC
Confidence 457999999999997653 22233345678889999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEE-EecCCCccccCCccccch-hhcCCccEEEEccccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM-FYRNPSADMLLQEAELDL-SLITKAKIFHYGSISL 216 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~-~~~~~~~~~~l~~~~l~~-~~i~~~~~v~~~~~~~ 216 (400)
.+|+++++.|+++||+++++.. .+.+|+++++..+.++++.++ +.+...+...++++++.. ..+++++++|++++..
T Consensus 71 ~~G~~i~~~L~~~gv~~~~v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 149 (351)
T 2afb_A 71 PLGDAAAGHLRKFGVKTDYIAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITP 149 (351)
T ss_dssp HHHHHHHHHHHHTTCBCTTEEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSG
T ss_pred HHHHHHHHHHHHcCCcceeEEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCccc
Confidence 9999999999999999999986 567999999877654444443 344334445566666654 3568999999987754
Q ss_pred -cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC---------
Q 015777 217 -ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP--------- 286 (400)
Q Consensus 217 -~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~--------- 286 (400)
..+...+.+.++++.+++.|+++++||+.+..+|. .+..++.+.++++++|++++|++|++.|++....
T Consensus 150 ~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 228 (351)
T 2afb_A 150 PLGKELPLILEDALKVANEKGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKL 228 (351)
T ss_dssp GGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------
T ss_pred ccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCccccccccccc
Confidence 34445678889999999999999999999888885 3445677788999999999999999999987643
Q ss_pred c---HHHHHHHHHhC-CCcEEEEEecCCcE--------EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 287 Y---DDAVVYKLFHA-NLKLLLVTEGPDGC--------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 287 ~---~~~~~~~l~~~-g~~~vvvT~G~~G~--------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
+ ..++++++++. |++.|+||+|++|+ +++.+++.+++|+++++++|||||||+|+|||+++|++|++
T Consensus 229 ~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~- 307 (351)
T 2afb_A 229 NREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD- 307 (351)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-
T ss_pred chhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-
Confidence 2 23456677774 99999999999975 77777778899999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++|+++|++++++.|+.+ +|+++++++++++
T Consensus 308 ------l~~a~~~A~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 308 ------SQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp ------HHHHHHHHHHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred ------HHHHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 99999999999999999999875 8999999998865
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=354.62 Aligned_cols=292 Identities=23% Similarity=0.263 Sum_probs=246.7
Q ss_pred CCcEEEEccceeecccCc----------CCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccce
Q 015777 60 SPLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~----------~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~ 125 (400)
.|+|+|+|++++|++..+ ++.|.. ....+...+||++.|+|+++++||.++.++|.
T Consensus 10 ~m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~---------- 79 (334)
T 2pkf_A 10 HMTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGA---------- 79 (334)
T ss_dssp SSEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECE----------
T ss_pred CCeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEE----------
Confidence 368999999999999876 444433 23457789999999999999999999999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchh--hc
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS--LI 203 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~--~i 203 (400)
+|+| +|+ +++.|++.||+++++.+.++.+|+.+++.++++|++.+.+++ ++...++.+++... .+
T Consensus 80 ---------vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~~~~~~~~~~~~~l 146 (334)
T 2pkf_A 80 ---------AGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYP--GAMSEARNIKLADVVSAI 146 (334)
T ss_dssp ---------ECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEEC--GGGGGGGGCCHHHHHHHH
T ss_pred ---------EeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECC--chhhhCCHhhcChhhhhh
Confidence 9999 899 999999999999999888788999999999988999887763 34555555555432 35
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCC
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 283 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~ 283 (400)
++++++|+++.. ++...++++.+++.|+++++||+++..+|. .+.+.++++++|++++|++|++.|++.
T Consensus 147 ~~~~~v~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~ 215 (334)
T 2pkf_A 147 GKPELVIIGAND------PEAMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSK 215 (334)
T ss_dssp CSCSEEEEESCC------HHHHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHH
T ss_pred cCCCEEEEcCCC------hHHHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhcc
Confidence 889999987642 456778888899999999999988766663 234567889999999999999999876
Q ss_pred CCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCc-eEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHH
Q 015777 284 EDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDF-SGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361 (400)
Q Consensus 284 ~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~-~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l 361 (400)
...+.+ .+.+. ++.|+||+|++|++++.+++ .+++|+++++ ++|||||||+|.|||+++|++|++ +
T Consensus 216 ~~~~~~----~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~ 283 (334)
T 2pkf_A 216 TGWSEA----DVMAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------L 283 (334)
T ss_dssp HCCCHH----HHHTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------H
T ss_pred CCCCHH----HHHhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------H
Confidence 443332 24443 89999999999999998887 8899999987 789999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 362 RDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 362 ~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++|+++|+++|++++++.|+.+.+|+++++++++++
T Consensus 284 ~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 319 (334)
T 2pkf_A 284 ERSAQLGSLVAVLVLESTGTQEWQWDYEAAASRLAG 319 (334)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcCCCCHHHHHHHHHH
Confidence 999999999999999999999889999999998764
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=353.97 Aligned_cols=289 Identities=24% Similarity=0.358 Sum_probs=243.1
Q ss_pred CcEEEEccceeecccCc----------CCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeeccccccccccee
Q 015777 61 PLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVK 126 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~----------~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~ 126 (400)
|+|+|+|++++|++..+ ++.|.. ....+...+||++.|+|++|+|||.++.++|.
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~----------- 69 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGT----------- 69 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEE-----------
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEE-----------
Confidence 36999999999999887 544443 23567788999999999999999999999999
Q ss_pred eeccCCCcCCC-ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCC
Q 015777 127 VIILPCPKVGA-DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITK 205 (400)
Q Consensus 127 ~~~~~~~~vG~-D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~ 205 (400)
+|+ | +|+ +++.|+++||+++++.+.++.+|+.+++.++++|++.+.++ +++...+.++++... ++
T Consensus 70 --------vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~ 135 (326)
T 3b1n_A 70 --------LGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KD 135 (326)
T ss_dssp --------EETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CS
T ss_pred --------ECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cC
Confidence 999 9 899 99999999999999988888899999999998899887666 345545555555422 78
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED 285 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~ 285 (400)
++++|+++.. ++.+.++++.+++.|+++++||+.+...|. .+.+.++++++|++++|++|++.|++...
T Consensus 136 ~~~v~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 204 (326)
T 3b1n_A 136 IKLAIVGPDG------FQGMVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTG 204 (326)
T ss_dssp CSEEEECSCC------HHHHHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHC
T ss_pred CCEEEECCcc------HHHHHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCC
Confidence 9999987542 457778889999999999999987665553 23456788899999999999999987644
Q ss_pred CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 286 PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 286 ~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
.+.++ +.+ +++.|+||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|
T Consensus 205 ~~~~~----l~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a 272 (326)
T 3b1n_A 205 WSEDE----IAS-RVQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATA 272 (326)
T ss_dssp CCHHH----HHT-TSSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred CCHHH----HHh-cCCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHH
Confidence 33322 333 3899999999999999998888899999986 789999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++|++++++.|+...+|+++++++++++
T Consensus 273 ~~~A~~~aa~~v~~~G~~~~~~~~~ev~~~l~~ 305 (326)
T 3b1n_A 273 GRLASLMGALKIAHQGPQTYAPTRAEIDARFET 305 (326)
T ss_dssp HHHHHHHHHHHHTSSSTTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999998888999999998864
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=353.89 Aligned_cols=292 Identities=18% Similarity=0.239 Sum_probs=244.2
Q ss_pred CCCcEEEEccceeecccCcCC--------------------CCcc----CCCCceecCCChHHHHHHHHHHc----CCC-
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL----GGS- 109 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~N~A~~larL----G~~- 109 (400)
+.++|+++|++++|++..++. .|.. +...+...+||++.|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 456899999999999998874 2221 34567899999999999999999 999
Q ss_pred ceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCc
Q 015777 110 SAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA 189 (400)
Q Consensus 110 ~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~ 189 (400)
+.++|. ||+|.+|+++++.|+++||++++++ .++.+|+.+++.++ +|+|+++.+ .++
T Consensus 86 ~~~ig~-------------------vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga 142 (347)
T 3otx_A 86 VTYVGC-------------------IADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGA 142 (347)
T ss_dssp EEEECE-------------------ECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEG
T ss_pred EEEEEE-------------------ecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhh
Confidence 999999 9999999999999999999999985 56679999999998 899988776 456
Q ss_pred cccCCccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc
Q 015777 190 DMLLQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE 265 (400)
Q Consensus 190 ~~~l~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~ 265 (400)
...+++++++. +.+++++++|++++... .+.+.+.++++.++++|+++++|+... .| .+.+++.+.++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~ 216 (347)
T 3otx_A 143 ANHLSSEHMRSPAVVRAMDESRIFYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLP 216 (347)
T ss_dssp GGGCCHHHHTSHHHHHHHHHCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGG
T ss_pred hhcCCHHHcCchhhHHHHhhCCEEEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHh
Confidence 66677777753 57889999999987543 346788899999999999999998521 11 1233567788999
Q ss_pred cCcEEEcCHhHHhcccCCC---CCcHHHHHHHHH------hCCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCC
Q 015777 266 TADIIKISEEEISFLTQGE---DPYDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDA 333 (400)
Q Consensus 266 ~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~------~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDt 333 (400)
++|++++|++|++.|++.. ..+.+++++.+. +.+++.|+||+|++|++++++++.+++|++++ ++|||
T Consensus 217 ~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDt 296 (347)
T 3otx_A 217 YTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDM 296 (347)
T ss_dssp GCSEEEEEHHHHHHHHHHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSS
T ss_pred hCCEEecCHHHHHHHhcccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCC
Confidence 9999999999999998652 234566777777 47999999999999999999998889998877 89999
Q ss_pred CCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCH
Q 015777 334 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 388 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~ 388 (400)
|||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+ .+|++
T Consensus 297 tGAGDaF~ag~l~~l~~g~~-------l~~a~~~a~~~aa~~v~~~G~--~~p~~ 342 (347)
T 3otx_A 297 NGAGDAFMGGFLSAYAVGKD-------LRRCCETGHYTAQEVIQRDGC--SFPEK 342 (347)
T ss_dssp CCSHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTCC------CCS
T ss_pred CChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCC--CCCCC
Confidence 99999999999999999999 999999999999999999996 44654
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=340.48 Aligned_cols=290 Identities=20% Similarity=0.187 Sum_probs=242.8
Q ss_pred CCcEEEEccceeec-ccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 60 SPLVVCFGEMLIDF-VPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 60 ~~~v~viG~~~vD~-~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
.|-+.|.+++++|+ +..++++... ....+...+||++.|+|++|++||.++.++|. +
T Consensus 2 ~mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------v 62 (320)
T 3ie7_A 2 SLIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGI-------------------A 62 (320)
T ss_dssp CCEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEE-------------------E
T ss_pred ceEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEE-------------------e
Confidence 35677789999999 9988876321 34567889999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCC--eeEEEecCCCccccCCccccch------hhcCCcc
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDL------SLITKAK 207 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~--r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~ 207 (400)
|+| +|+++++.|+++||+++++...++ +|+.++++++ +|+ |+++..+ +. .+++++++. +.+++++
T Consensus 63 G~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~~--g~--~~~~~~~~~~~~~~~~~~~~~~ 135 (320)
T 3ie7_A 63 GSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLS-DDTNGSTMIPEA--GF--TVSQTNKDNLLKQIAKKVKKED 135 (320)
T ss_dssp EST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEE-TTCSCCEEEECC--CC--CCCHHHHHHHHHHHHHHCCTTC
T ss_pred cCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEE-CCCceeEEEeCC--CC--CCCHHHHHHHHHHHHHHhcCCC
Confidence 998 999999999999999999955555 8999999988 788 8776653 22 355555542 5688999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhcccCCCCC
Q 015777 208 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDP 286 (400)
Q Consensus 208 ~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~l~~~~~~ 286 (400)
++|++++.. .....+.+.++++.+++.|+++++||+. + .+.+.+. ++|++++|++|++.|+|....
T Consensus 136 ~v~~~g~~~-~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~----~l~~~l~~~~dil~~N~~E~~~l~g~~~~ 202 (320)
T 3ie7_A 136 MVVIAGSPP-PHYTLSDFKELLRTVKATGAFLGCDNSG--------E----YLNLAVEMGVDFIKPNEDEVIAILDEKTN 202 (320)
T ss_dssp EEEEESCCC-TTCCHHHHHHHHHHHHHHTCEEEEECCH--------H----HHHHHHHHCCSEECCBTTGGGGGSCTTCC
T ss_pred EEEEeCCCC-CCCCHHHHHHHHHHHHhcCCEEEEECCh--------H----HHHHHHhcCCeEEeeCHHHHHHHhCCCcC
Confidence 999976532 2344678889999999999999999962 2 2334444 899999999999999998765
Q ss_pred cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHH
Q 015777 287 YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 366 (400)
Q Consensus 287 ~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~ 366 (400)
...+.+.++.+. ++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|++
T Consensus 203 ~~~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~ 274 (320)
T 3ie7_A 203 SLEENIRTLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLK 274 (320)
T ss_dssp CHHHHHHHHTTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHH
T ss_pred CCHHHHHHHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 233444455555 999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 367 FANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 367 ~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+++|+++|++.|+ .+|++++++++++++
T Consensus 275 ~A~a~aa~~v~~~G~--~~~~~~ev~~~~~~~ 304 (320)
T 3ie7_A 275 VATGCSASKVMQQDS--SSFDLEAAGKLKNQV 304 (320)
T ss_dssp HHHHHHHHHHTSSSS--SCCCHHHHHHHGGGC
T ss_pred HHHHHHHHHHhCcCC--CCCCHHHHHHHhhCe
Confidence 999999999999994 679999999999875
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=341.92 Aligned_cols=290 Identities=17% Similarity=0.169 Sum_probs=237.1
Q ss_pred CCcEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+|.++|+|++++|++..++++... ....+...+||++.|+|++|+|||.++.++|. +|
T Consensus 20 ~Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 80 (330)
T 2jg1_A 20 HMILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGF-------------------IG 80 (330)
T ss_dssp CCEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEE-------------------EE
T ss_pred cEEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEE-------------------ec
Confidence 356778999999999988865211 23467889999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEE
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFH 210 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~ 210 (400)
+ .+|+++++.|+++||+++++...++ |++++++++++ +++++.. +++ .+++++++. +.++++|++|
T Consensus 81 ~-~~G~~l~~~L~~~gV~~~~v~~~~~--t~~~~~~v~~~-~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~ 152 (330)
T 2jg1_A 81 G-ELGQFIAKKLDHADIKHAFYNIKGE--TRNCIAILHEG-QQTEILE--QGP--EIDNQEAAGFIKHFEQMMEKVEAVA 152 (330)
T ss_dssp H-HHHHHHHHHHHHTTCEECCEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHGGGCSEEE
T ss_pred c-hhHHHHHHHHHHCCCceeEEEccCC--CeeEEEEEeCC-CcEEEEC--CCC--CCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6 7999999999999999999887654 66667777665 6655443 333 255544431 3467899999
Q ss_pred EccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc---cCcEEEcCHhHHhcccCCCCC-
Q 015777 211 YGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE---TADIIKISEEEISFLTQGEDP- 286 (400)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~---~~dvl~~N~~E~~~l~~~~~~- 286 (400)
++++... ..+.+.+.++++.++++|+++++||+. . .+.++++ ++|++++|++|++.|++....
T Consensus 153 ~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~----~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~ 219 (330)
T 2jg1_A 153 ISGSLPK-GLNQDYYAQIIERCQNKGVPVILDCSG--------A----TLQTVLENPYKPTVIKPNISELYQLLNQPLDE 219 (330)
T ss_dssp EESCCCB-TSCTTHHHHHHHHHHTTTCCEEEECCH--------H----HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCC
T ss_pred EECCCCC-CCCHHHHHHHHHHHHHCCCEEEEECCc--------H----HHHHHHhccCCceEEEeCHHHHHHHhCCCCCC
Confidence 8765332 234567788899999999999999962 2 2444555 899999999999999987533
Q ss_pred ---cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHH
Q 015777 287 ---YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRD 363 (400)
Q Consensus 287 ---~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~ 363 (400)
+..+.+++++++|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++
T Consensus 220 ~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~ 292 (330)
T 2jg1_A 220 SLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHD 292 (330)
T ss_dssp CHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHH
Confidence 2344567778889999999999999999998888899999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 364 ALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 364 al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|+++|+++|++++++.|+. +|++++++++++++
T Consensus 293 al~~A~a~aa~~v~~~G~~--~~~~~ev~~~~~~i 325 (330)
T 2jg1_A 293 LLKKANTLGMLNAQEAQTG--YVNLNNYDDLFNQI 325 (330)
T ss_dssp HHHHHHHHHHHHHTSSSSS--CCCGGGHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCcCCC--CCCHHHHHHHHhce
Confidence 9999999999999999984 69999999998875
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=356.17 Aligned_cols=287 Identities=19% Similarity=0.217 Sum_probs=239.3
Q ss_pred CcEEEEccceeecccCcCCC--------------------Ccc----CCCCceecCCChHHHHHHHHHHc---CCCceee
Q 015777 61 PLVVCFGEMLIDFVPTVSGL--------------------SLA----ESPAFKKAPGGAPANVAVGIARL---GGSSAFI 113 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~--------------------~~~----~~~~~~~~~GG~~~N~A~~larL---G~~~~~i 113 (400)
.+|+++|++++|++..++.. |.. +.......+||++.|+|+++++| |.++.++
T Consensus 24 ~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~i 103 (365)
T 3loo_A 24 GMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFF 103 (365)
T ss_dssp TSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEEE
T ss_pred ccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEEE
Confidence 47999999999999998862 110 11246789999999999999987 9999999
Q ss_pred ecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccC
Q 015777 114 GKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193 (400)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l 193 (400)
|. ||+|.+|+++++.|++.||+++++.. ++.+|+++++.++ +|+|+++.+ .++...+
T Consensus 104 g~-------------------vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~ 160 (365)
T 3loo_A 104 GC-------------------VGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDF 160 (365)
T ss_dssp EE-------------------EESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGC
T ss_pred EE-------------------ecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhC
Confidence 99 99999999999999999999999887 6779999999998 788988876 5666678
Q ss_pred Cccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcE
Q 015777 194 QEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADI 269 (400)
Q Consensus 194 ~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dv 269 (400)
++++++. +.+++++++|++++.+. .+.+.+.++++.++++|+++++|+... .| .+..++.+.++++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~di 234 (365)
T 3loo_A 161 TPEHLRSDGNRAYLQGAQFFYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSAP--FV--PQFYKNNLEEIFPYVDV 234 (365)
T ss_dssp CGGGGGSHHHHHHHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCST--HH--HHHCHHHHHHHGGGCSE
T ss_pred CHhHcCchhhHHHHhhCCEEEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCch--hh--hHHHHHHHHHHHHhCCE
Confidence 8877763 56789999999987543 346788899999999999999998521 11 13345677888999999
Q ss_pred EEcCHhHHhcccCCC---CCcHHHHHHHHHhC------CCcEEEEEecCCcEEEE--eCCceEEEccccc---cccCCCC
Q 015777 270 IKISEEEISFLTQGE---DPYDDAVVYKLFHA------NLKLLLVTEGPDGCRYY--TKDFSGRVQGLKV---EAVDATG 335 (400)
Q Consensus 270 l~~N~~E~~~l~~~~---~~~~~~~~~~l~~~------g~~~vvvT~G~~G~~~~--~~~~~~~vpa~~v---~vvDttG 335 (400)
+++|++|++.|++.. ..+.+++++++.++ +++.||||+|++|++++ .+++.+++|++++ ++|||||
T Consensus 235 l~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttG 314 (365)
T 3loo_A 235 LFGNETEAIALAKEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNG 314 (365)
T ss_dssp EEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTT
T ss_pred EecCHHHHHHHhcccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCC
Confidence 999999999998753 23456677788774 89999999999999999 7778889999988 8999999
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
|||+|+|||+++|++|++ +++|+++|+++|+++|++.|++.
T Consensus 315 AGDaF~agfl~~l~~g~~-------l~~a~~~a~~~Aa~~v~~~G~~~ 355 (365)
T 3loo_A 315 AGDAFVGGFLAQLLQSRT-------VDVCIKCGIWAAREIIQRSGCTF 355 (365)
T ss_dssp HHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHGGGGG
T ss_pred hHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999 99999999999999999999853
|
| >3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=333.74 Aligned_cols=291 Identities=22% Similarity=0.241 Sum_probs=239.8
Q ss_pred cEEEE-ccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCF-GEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~vi-G~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++ +++++|++..+++.... ....+...+||++.|+|+++++||.++.++|. +|+
T Consensus 3 ~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~ 63 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFP-------------------AGG 63 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEE-------------------ECH
T ss_pred cEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ecC
Confidence 46666 67999999999887321 35678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch-----hhcCCccEEEEc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-----SLITKAKIFHYG 212 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~-----~~i~~~~~v~~~ 212 (400)
| +|+++++.|+++||+++++...++.+++.++ ..+.+|+++++.+++ +. +++++++. +.+..++++|++
T Consensus 64 d-~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~-~~~~~g~~~~~~~~g--~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (309)
T 3umo_A 64 A-TGEHLVSLLADENVPVATVEAKDWTRQNLHV-HVEASGEQYRFVMPG--AA--LNEDEFRQLEEQVLEIESGAILVIS 137 (309)
T ss_dssp H-HHHHHHHHHHHTTCCEEEEECSSCCCCCEEE-EETTTCCEEEEECCC--CC--CCHHHHHHHHHHHTTSCTTCEEEEE
T ss_pred c-hHHHHHHHHHHcCCceEEEEecCCCeeEEEE-EECCCCcEEEEEcCC--CC--CCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8 9999999999999999998776554444443 334478888777643 32 55555431 124578899988
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc--CcEEEcCHhHHhcccCCCCC---c
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEISFLTQGEDP---Y 287 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~--~dvl~~N~~E~~~l~~~~~~---~ 287 (400)
++. ....+.+.+.++++.++++|+++++||+ . +.+.+++++ +|++++|++|++.|+|.... +
T Consensus 138 g~~-~~~~~~~~~~~~~~~a~~~~~~v~~D~~--------~----~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~ 204 (309)
T 3umo_A 138 GSL-PPGVKLEKLTQLISAAQKQGIRCIVDSS--------G----EALSAALAIGNIELVKPNQKELSALVNRELTQPDD 204 (309)
T ss_dssp SCC-CTTCCHHHHHHHHHHHHHTTCEEEEECC--------H----HHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTH
T ss_pred ccC-CCCCCHHHHHHHHHHHHhcCCEEEEECC--------c----HHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHH
Confidence 753 2234567888999999999999999995 1 235566776 59999999999999997633 3
Q ss_pred HHHHHHHHHhCCC-cEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHH
Q 015777 288 DDAVVYKLFHANL-KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 366 (400)
Q Consensus 288 ~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~ 366 (400)
..+.++.+++++. +.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|++
T Consensus 205 ~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~ 277 (309)
T 3umo_A 205 VRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVR 277 (309)
T ss_dssp HHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 3456778888887 89999999999999999889999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHhCCC
Q 015777 367 FANACGALTVMERGAIPALPTREAVLNAIHAPV 399 (400)
Q Consensus 367 ~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~~ 399 (400)
+|+++|+++|++.|+. +|+++||+++++++.
T Consensus 278 ~A~~~aa~~v~~~G~~--~~~~~ev~~~l~~~~ 308 (309)
T 3umo_A 278 FGVAAGSAATLNQGTR--LCSHDDTQKIYAYLS 308 (309)
T ss_dssp HHHHHHHHHTTSSTTC--CCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCC--CCCHHHHHHHHHHhc
Confidence 9999999999999985 699999999998763
|
| >3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=349.30 Aligned_cols=298 Identities=18% Similarity=0.238 Sum_probs=239.5
Q ss_pred cEEEEccceeecccCcCCCCcc------------------------CCCCceecCCChHHHHHHHHHHcCCC---ceeee
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA------------------------ESPAFKKAPGGAPANVAVGIARLGGS---SAFIG 114 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~------------------------~~~~~~~~~GG~~~N~A~~larLG~~---~~~i~ 114 (400)
.|++||+.++|++..++...+. +.......+||++.|+|+++++||.+ +.|+|
T Consensus 28 ~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG 107 (372)
T 3uq6_A 28 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVG 107 (372)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEE
T ss_pred eEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEe
Confidence 5999999999999888732110 23345678999999999999999975 88999
Q ss_pred cccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCC
Q 015777 115 KTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQ 194 (400)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~ 194 (400)
+ ||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|++..+ .++...+.
T Consensus 108 ~-------------------VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~ 165 (372)
T 3uq6_A 108 C-------------------IGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLS 165 (372)
T ss_dssp E-------------------ECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCC
T ss_pred e-------------------ecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcc
Confidence 9 9999999999999999999999998888888999988875 899999887 45666677
Q ss_pred ccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 195 EAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 195 ~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
+++++. +.++.++++|++++.. +...+...++++.++++|+++++|++.... .+..++.+.++++++|++
T Consensus 166 ~~~i~~~~~~~~i~~a~~~~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~~----~~~~~~~l~~ll~~~Dil 239 (372)
T 3uq6_A 166 LAHIEQPHVWSLVEKAQVYYIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPFL----SQFNTKEVDEMISYSNIV 239 (372)
T ss_dssp HHHHTSHHHHHHHHHCSEEEEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHHH----HHHCHHHHHHHHTTCSEE
T ss_pred hhhhhhhhHHHHhhcccEEEEecccc--cccHHHHHHHHHHHHHcCCeEeeccccchh----hhhhHHHHHHHhhcCCcc
Confidence 777653 5678899999998754 345677888999999999999999863211 233456778889999999
Q ss_pred EcCHhHHhcccCCCC---CcHHHHHHHHHh-------CCCcEEEEEecCCcEEEEeCCc--eEE--Ecccc-ccccCCCC
Q 015777 271 KISEEEISFLTQGED---PYDDAVVYKLFH-------ANLKLLLVTEGPDGCRYYTKDF--SGR--VQGLK-VEAVDATG 335 (400)
Q Consensus 271 ~~N~~E~~~l~~~~~---~~~~~~~~~l~~-------~g~~~vvvT~G~~G~~~~~~~~--~~~--vpa~~-v~vvDttG 335 (400)
++|++|++.|++... .+.++.++.+.+ .+.+.||||+|++|++++.+++ ... +++.+ .++|||||
T Consensus 240 ~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtG 319 (372)
T 3uq6_A 240 FGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNG 319 (372)
T ss_dssp EEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTT
T ss_pred cCCHHHHHHHhCCCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCc
Confidence 999999999987543 233455555544 4678999999999999998763 233 34433 47999999
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
|||+|+|||+++|++|++ +++|+++|+++|+.+|++.|+ .+|++++++-.|+
T Consensus 320 AGDaF~agfl~~l~~g~~-------l~~a~~~a~~aAa~vv~~~Ga--~lp~r~~~~lkln 371 (372)
T 3uq6_A 320 AGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAYIICRSGF--SLGSRDSYSLKIN 371 (372)
T ss_dssp HHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTSSSS--CCCCGGGCC----
T ss_pred hHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCC--CCCChhHHHHHhc
Confidence 999999999999999999 999999999999999999997 4688887764443
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=334.21 Aligned_cols=292 Identities=22% Similarity=0.197 Sum_probs=236.7
Q ss_pred CCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
+|.++|+|++++|++..+++ +.. ....+...+||++.|+|++|+|||.++.++|. +
T Consensus 2 ~m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------v 61 (323)
T 2f02_A 2 SLIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGV-------------------L 61 (323)
T ss_dssp CCEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEE-------------------E
T ss_pred ceEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEE-------------------e
Confidence 46899999999999999887 432 23467889999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEE
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIF 209 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v 209 (400)
|+ .+|+++++.|+++||+++++...++ |++++++++++ +++++.. +++ .+++++++. +.++++|++
T Consensus 62 G~-~~G~~i~~~L~~~gV~~~~v~~~~~--t~~~~~~~~~~-~~~~~~~--~g~--~l~~~~~~~~~~~~~~~~~~~~~v 133 (323)
T 2f02_A 62 GG-FHGAFIANELKKANIPQAFTSIKEE--TRDSIAILHEG-NQTEILE--AGP--TVSPEEISNFLENFDQLIKQAEIV 133 (323)
T ss_dssp EH-HHHHHHHHHHHHTTCCBCCEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHHTTCSEE
T ss_pred cc-chHHHHHHHHHHCCCceeEEEcCCC--CeeEEEEEcCC-CeEEEEC--CCC--CCCHHHHHHHHHHHHHhccCCCEE
Confidence 96 6999999999999999999887654 56666666665 6655443 333 255554432 246899999
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC---
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP--- 286 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~--- 286 (400)
|+.++... ....+.+.++++.+++.|+++++||+. ..+.+.+..+ +++|++++|++|++.|++....
T Consensus 134 ~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~Dp~~--------~~~~~~l~~~-~~~dil~~N~~E~~~l~g~~~~~~~ 203 (323)
T 2f02_A 134 TISGSLAK-GLPSDFYQELVQKAHAQEVKVLLDTSG--------DSLRQVLQGP-WKPYLIKPNLEELEGLLGQDFSENP 203 (323)
T ss_dssp EEESCCCB-TSCTTHHHHHHHHHHHTTCEEEEECCT--------HHHHHHHHSS-CCCSEECCBHHHHHHHHTCCCCSSC
T ss_pred EEECCCCC-CCChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhcc-CCCeEEecCHHHHHHHhCCCCCCCc
Confidence 98654332 223457788899999999999999962 2222222211 5899999999999999987632
Q ss_pred --cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 287 --YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 287 --~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
+..+.+++++++|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|
T Consensus 204 ~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a 276 (323)
T 2f02_A 204 LAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAEL 276 (323)
T ss_dssp HHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHH
Confidence 2234566777889999999999999999998888899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|++++++.|+. +|++++++++++++
T Consensus 277 ~~~A~~~aa~~v~~~G~~--~~~~~ev~~~~~~~ 308 (323)
T 2f02_A 277 LKWGMAAGMANAQERMTG--HVDVENVKKHLMNI 308 (323)
T ss_dssp HHHHHHHHHHHHHSSSSS--CCCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCcC--CCCHHHHHHHhhcE
Confidence 999999999999999974 69999999998765
|
| >4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=344.96 Aligned_cols=287 Identities=21% Similarity=0.264 Sum_probs=230.6
Q ss_pred CCCcEEEEccceeecccC--cCCC----Ccc--CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc
Q 015777 59 ESPLVVCFGEMLIDFVPT--VSGL----SLA--ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL 130 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~--~~~~----~~~--~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~ 130 (400)
.+++|+|+|++++|++.. +++. |.+ ....+...+||+ .|+|++|+|||.++.++|.
T Consensus 52 ~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~--------------- 115 (352)
T 4e84_A 52 ARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCV--------------- 115 (352)
T ss_dssp TTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEE---------------
T ss_pred CCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEE---------------
Confidence 457899999999999875 3332 222 335678899998 8999999999999999999
Q ss_pred CCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCcccc--chhhcCCccE
Q 015777 131 PCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL--DLSLITKAKI 208 (400)
Q Consensus 131 ~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l--~~~~i~~~~~ 208 (400)
+|+|.+|+++++.|+++||++ .+...++.+|+.+++.++.++++..+.+. .........+.+ ..+.++++|+
T Consensus 116 ----vG~D~~G~~i~~~L~~~GV~~-~~~~~~~~~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 189 (352)
T 4e84_A 116 ----VGCDEPGERIVELLGSSGVTP-HLERDPALPTTIKLRVLARQQQLLRVDFE-AMPTHEVLLAGLARFDVLLPQHDV 189 (352)
T ss_dssp ----EESSHHHHHHHHHHTTTSCEE-EEEEETTSCCCEEEEEEESSCEEEEEEEC-CCCCHHHHHHHHHHHHHHGGGCSE
T ss_pred ----eCCChhHHHHHHHHHHcCCce-eeEECCCCCCceEEEEEcCCceEEEEEcC-CCCCHHHHHHHHHHHHHhcccCCE
Confidence 999999999999999999999 45556777999999998876665444332 122211222111 1356889999
Q ss_pred EEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC--
Q 015777 209 FHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-- 286 (400)
Q Consensus 209 v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-- 286 (400)
+|++++.... .+...++++.++++|+++++||+++ .| ++++++|++++|++|++.|++....
T Consensus 190 v~~~g~~~~~---~~~~~~~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g~~~~~~ 253 (352)
T 4e84_A 190 VLMSDYAKGG---LTHVTTMIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVGQWKSED 253 (352)
T ss_dssp EEEECCSSSS---CSSHHHHHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHCCCSSHH
T ss_pred EEEeCCCCCC---HHHHHHHHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhCCCCCHH
Confidence 9998765322 1236778889999999999999753 22 3678999999999999999993211
Q ss_pred cHHHHHHHHHh-CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHH
Q 015777 287 YDDAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 365 (400)
Q Consensus 287 ~~~~~~~~l~~-~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al 365 (400)
+..+.++++++ .|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+
T Consensus 254 ~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al 326 (352)
T 4e84_A 254 DLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAV 326 (352)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHH
Confidence 12345566764 69999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHH
Q 015777 366 RFANACGALTVMERGAIPALPTREAVL 392 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~~~~~p~~~~l~ 392 (400)
++|+++|+++|++.|+.+ ++++||+
T Consensus 327 ~~A~aaaa~~v~~~Ga~~--~t~~el~ 351 (352)
T 4e84_A 327 VLANRAAGIVVGKLGTAT--VDYDELF 351 (352)
T ss_dssp HHHHHHHHHHHTSSSSCC--CCHHHHT
T ss_pred HHHHHHHHHHhcCCCCcc--CCHHHhc
Confidence 999999999999999876 7999885
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=338.30 Aligned_cols=291 Identities=14% Similarity=0.133 Sum_probs=238.1
Q ss_pred CCCcEEEEccceeecccCcCCCCcc----CC---CCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILP 131 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~----~~---~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~ 131 (400)
.-|.++|+|++++|++..+++ +.+ .. ..+...+||++.|+|++|+|||.++.++|.
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~---------------- 73 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGF---------------- 73 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEE----------------
T ss_pred cceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEE----------------
Confidence 347899999999999999887 433 23 577889999999999999999999999999
Q ss_pred CCcCCCChHHHHHHHHHHHCC--CCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhc
Q 015777 132 CPKVGADEFGYMLADILKENN--VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLI 203 (400)
Q Consensus 132 ~~~vG~D~~g~~i~~~L~~~g--V~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i 203 (400)
+|+| +|+++++.|+++| |+++++...++ |++++++++++|++.+.+.. +++ .+++++++. +.+
T Consensus 74 ---vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~~--t~~~~~~v~~~g~~~~~~~~-~g~--~l~~~~~~~~~~~~~~~~ 144 (331)
T 2ajr_A 74 ---VGGY-MGKILVEELRKISKLITTNFVYVEGE--TRENIEIIDEKNKTITAINF-PGP--DVTDMDVNHFLRRYKMTL 144 (331)
T ss_dssp ---EEHH-HHHHHHHHHHHHCTTEEEEEEEESSC--CEEEEEEEETTTTEEEEEEC-CCC--CCCHHHHHHHHHHHHHHH
T ss_pred ---ecCc-hHHHHHHHHHHcCCccceEEEEcCCC--CeEEEEEEeCCCceEEEEeC-CCC--CCCHHHHHHHHHHHHHhc
Confidence 9998 9999999999999 99998877653 66667777778988333432 333 255554432 356
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc---cCcEEEcCHhH-Hhc
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE---TADIIKISEEE-ISF 279 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~---~~dvl~~N~~E-~~~ 279 (400)
++++++|+++.... ..+.+.+.++++.++++|+++++||+. +. +.++++ ++|++++|++| ++.
T Consensus 145 ~~~~~v~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~----~~~~l~~~~~~dil~~N~~E~~~~ 211 (331)
T 2ajr_A 145 SKVDCVVISGSIPP-GVNEGICNELVRLARERGVFVFVEQTP--------RL----LERIYEGPEFPNVVKPDLRGNHAS 211 (331)
T ss_dssp TTCSEEEEESCCCT-TSCTTHHHHHHHHHHHTTCEEEEECCH--------HH----HHHHHHSSCCCSEECCCCTTCCSC
T ss_pred ccCCEEEEECCCCC-CCCHHHHHHHHHHHHHcCCEEEEECCh--------HH----HHHHHhcCCCCeEEEeCccchHHH
Confidence 88999999764322 233467788899999999999999962 22 334444 49999999999 999
Q ss_pred ccCCCCCcH---HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEc-cccccccCCCCchHHHHHHHHHHHH-cCCcc
Q 015777 280 LTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ-GLKVEAVDATGAGDAFVAGILSQLS-TDFSL 354 (400)
Q Consensus 280 l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vp-a~~v~vvDttGAGDaF~Agfl~~l~-~g~~~ 354 (400)
|++....+. .+.+++++++ ++.|+||+|++|++++++++.+++| +++++++|||||||+|+|||+++|+ +|++
T Consensus 212 l~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~- 289 (331)
T 2ajr_A 212 FLGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN- 289 (331)
T ss_dssp BTTBCCCSHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-
T ss_pred HhCCCCCCHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-
Confidence 998764332 3456778777 9999999999999999888888999 9999999999999999999999999 9999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|+++|++++++.|+ .+|++++++++++++
T Consensus 290 ------~~~al~~A~a~aa~~v~~~G~--~~~~~~ev~~~~~~~ 325 (331)
T 2ajr_A 290 ------FLEMAKFGFASALAATRRKEK--YMPDLEAIKKEYDHF 325 (331)
T ss_dssp ------HHHHHHHHHHHHHHHTTSSSC--CCCCHHHHHTTGGGE
T ss_pred ------HHHHHHHHHHHHHHHHcCcCc--CCCCHHHHHHHHhhc
Confidence 999999999999999999997 469999999988764
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=340.10 Aligned_cols=277 Identities=13% Similarity=0.212 Sum_probs=231.2
Q ss_pred CCCcEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
++++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|++||.++.++|. +
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------v 79 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSA-------------------V 79 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEE-------------------E
T ss_pred CCCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEE-------------------E
Confidence 4468999999999999988776621 23456788999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccc
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
|+| +|+++++.|++.||+++++...++.+|+.+++.+++ |+|+++.++ ++...++ ++++ ++++++|+++..
T Consensus 80 G~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~--ga~~~~~-~~l~----~~~~~v~~~~~~ 150 (306)
T 3bf5_A 80 GMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQ--GAMAAWA-PQLA----DEYEYVHFSTGP 150 (306)
T ss_dssp ETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEEC--THHHHCC-CCCC----SCEEEEEECSSS
T ss_pred eCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeC--Chhhhhh-Hhhc----CCCCEEEECChH
Confidence 999 999999999999999999877777789999999988 999888773 4544455 4442 689999998753
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
...++++.+++ ++++||+.+...| ..+.+.++++++|++++|++|++.|++....+.. ++
T Consensus 151 --------~~~~~~~~a~~---~v~~D~~~~~~~~-----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l 210 (306)
T 3bf5_A 151 --------NYLDMAKSIRS---KIIFDPSQEIHKY-----SKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP----KV 210 (306)
T ss_dssp --------SHHHHHHHCCS---EEEECCGGGGGGS-----CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC----SS
T ss_pred --------HHHHHHHHhCC---cEEEcCchhhhhc-----cHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc----cE
Confidence 34566676665 9999998532111 1345667889999999999999999875443221 11
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
.|+||+|++|++++.+++.+++|+++++ +|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 211 ------~vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~ 276 (306)
T 3bf5_A 211 ------TTIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHV 276 (306)
T ss_dssp ------CEEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred ------EEEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 1999999999999998888899999999 99999999999999999999999 999999999999999
Q ss_pred hcc--cCCCCCCCCHHHHHHHHhC
Q 015777 376 VME--RGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~--~G~~~~~p~~~~l~~~l~~ 397 (400)
+++ .|+.+.+|+++++++++++
T Consensus 277 v~~~~~G~~~~~p~~~ev~~~~~~ 300 (306)
T 3bf5_A 277 IDDGIENFSLNMEDLERETENYRR 300 (306)
T ss_dssp HHHCSTTCCCCHHHHHHHHHHHHH
T ss_pred hccCCccccccCCCHHHHHHHHHh
Confidence 999 9998788999999998865
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-42 Score=330.65 Aligned_cols=288 Identities=22% Similarity=0.249 Sum_probs=230.4
Q ss_pred cEEEE-ccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 62 LVVCF-GEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 62 ~v~vi-G~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+|+++ |++++|++..+++. .. ....+...+||++.|+|++|++||.++.++|. +|
T Consensus 3 ~I~~v~g~~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 62 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQI-YPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFP-------------------AG 62 (309)
T ss_dssp CEEEECSSCEEEEEEEESCC-CSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEE-------------------EC
T ss_pred eEEEEeccchheEEEEcCCC-cCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ec
Confidence 57755 69999999988873 32 24567889999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEE-EcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEE
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVT-LRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIF 209 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~-~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v 209 (400)
+| +|+++++.|+++||+++++...++.++ ++++ ++++|+++++.. ++.. +++++++ .+.+++ +++
T Consensus 63 ~d-~g~~i~~~l~~~gv~~~~v~~~~~t~~--~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~-~~v 134 (309)
T 3cqd_A 63 GA-TGEHLVSLLADENVPVATVEAKDWTRQ--NLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESG-AIL 134 (309)
T ss_dssp HH-HHHHHHHHHHHTTCCEEEEECSSCCCC--CEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHHTSCTT-CEE
T ss_pred Cc-hHHHHHHHHHHcCCCceeEEcCCCCee--EEEEEEcCCCCEEEEEc--CCCC--CCHHHHHHHHHHHHHhhcC-CEE
Confidence 97 999999999999999999876654444 4455 678888866554 3332 4444443 134677 999
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccC-cEEEcCHhHHhcccCCCCC--
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETA-DIIKISEEEISFLTQGEDP-- 286 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~-dvl~~N~~E~~~l~~~~~~-- 286 (400)
|++++... ....+.+.++++.+++.|+++++||+. ..+++. +.+.+ |++++|++|++.|++....
T Consensus 135 ~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~---l~~~~~dil~~N~~E~~~l~g~~~~~~ 202 (309)
T 3cqd_A 135 VISGSLPP-GVKLEKLTQLISAAQKQGIRCIVDSSG--------EALSAA---LAIGNIELVKPNQKELSALVNRELTQP 202 (309)
T ss_dssp EEESCCCT-TCCHHHHHHHHHHHHTTTCEEEEECCH--------HHHHHH---TTTCCBSEECCBHHHHHHHHTSCCCST
T ss_pred EEECCCCC-CCCHHHHHHHHHHHHHcCCeEEEECCh--------HHHHHH---HHhCCCEEEeeCHHHHHHHhCCCCCCH
Confidence 98765332 234677888999999999999999962 222222 23688 9999999999999987532
Q ss_pred -cHHHHHHHHHhCC-CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 287 -YDDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 287 -~~~~~~~~l~~~g-~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
+..+.++++++.| ++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|
T Consensus 203 ~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a 275 (309)
T 3cqd_A 203 DDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEM 275 (309)
T ss_dssp THHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHH
Confidence 2345677888899 999999999999999988888899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|+.++++.|+. .|++++++++++++
T Consensus 276 ~~~A~~~aa~~~~~~G~~--~~~~~~v~~~~~~~ 307 (309)
T 3cqd_A 276 VRFGVAAGSAATLNQGTR--LCSHDDTQKIYAYL 307 (309)
T ss_dssp HHHHHHHHHHHTC-------CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCCC--CCCHHHHHHHHHHh
Confidence 999999999999999974 59999999998875
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=341.62 Aligned_cols=291 Identities=20% Similarity=0.296 Sum_probs=240.9
Q ss_pred CCcEEEEccceeecccCcCC-------CCcc-----------------CCCCceecCCChHHHHHHHHHHcC----CCce
Q 015777 60 SPLVVCFGEMLIDFVPTVSG-------LSLA-----------------ESPAFKKAPGGAPANVAVGIARLG----GSSA 111 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~N~A~~larLG----~~~~ 111 (400)
.++|+|+|++++|++..+++ .... +...+...+||++.|+|+++++|| .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 35799999999999988775 1110 124677899999999999999996 8999
Q ss_pred eeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccc
Q 015777 112 FIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM 191 (400)
Q Consensus 112 ~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~ 191 (400)
++|. +|+|.+|+++++.|+++||+++++.. ++.+|+.+++.++ +|+|+++.+ .++..
T Consensus 86 ~ig~-------------------vG~D~~G~~i~~~L~~~gv~~~~v~~-~~~~T~~~~~~~~-~g~r~~~~~--~~a~~ 142 (345)
T 1bx4_A 86 FFGC-------------------IGIDKFGEILKRKAAEAHVDAHYYEQ-NEQPTGTCAACIT-GDNRSLIAN--LAAAN 142 (345)
T ss_dssp EEEE-------------------EESSHHHHHHHHHHHHTTCEEEEEEE-SSSCCCEEEEEEE-TTEEEEEEE--CGGGG
T ss_pred EEEE-------------------eCCChhHHHHHHHHHHcCCceeeeec-CCCCCceEEEEEc-CCceEeeec--cchHh
Confidence 9999 99999999999999999999998864 5668999999887 788877655 45555
Q ss_pred cCCcc-ccc----hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc
Q 015777 192 LLQEA-ELD----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET 266 (400)
Q Consensus 192 ~l~~~-~l~----~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~ 266 (400)
.++++ +++ .+.+++++++|++++... .+.+.+.++++.++++|+++++|+.. ..| .+..++.+.+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~--~~~--~~~~~~~~~~~l~~ 216 (345)
T 1bx4_A 143 CYKKEKHLDLEKNWMLVEKARVCYIAGFFLT--VSPESVLKVAHHASENNRIFTLNLSA--PFI--SQFYKESLMKVMPY 216 (345)
T ss_dssp GCCGGGTTTSHHHHHHHHHCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCS--HHH--HHHTHHHHHHHGGG
T ss_pred hcCcccccCcHHHHHHHhhCCEEEEEEEecc--CCHHHHHHHHHHHHHcCCEEEEeCCc--HHH--HHHHHHHHHHHhcc
Confidence 66666 665 355778999999887543 34578888999999999999999852 112 12234566778999
Q ss_pred CcEEEcCHhHHhcccCCC---CCcHHHHHHHHHh------CCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCCC
Q 015777 267 ADIIKISEEEISFLTQGE---DPYDDAVVYKLFH------ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDAT 334 (400)
Q Consensus 267 ~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~------~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDtt 334 (400)
+|++++|++|++.|++.. ..+.+++++++++ .|++.|+||+|++|++++.+++.+++|++++ +++|||
T Consensus 217 ~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDtt 296 (345)
T 1bx4_A 217 VDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTN 296 (345)
T ss_dssp CSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHH
T ss_pred CCEEeCCHHHHHHHhcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCC
Confidence 999999999999998643 2345667788887 5999999999999999998888889999887 899999
Q ss_pred CchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCH
Q 015777 335 GAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 388 (400)
Q Consensus 335 GAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~ 388 (400)
||||+|+|||+++|++|++ +++|+++|+++|++++++.|+. +|++
T Consensus 297 GAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~--~p~~ 341 (345)
T 1bx4_A 297 GAGDAFVGGFLSQLVSDKP-------LTECIRAGHYAASIIIRRTGCT--FPEK 341 (345)
T ss_dssp HHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSC--CCSS
T ss_pred CcchHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCC--CCCc
Confidence 9999999999999999999 9999999999999999999975 4543
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=342.61 Aligned_cols=288 Identities=22% Similarity=0.284 Sum_probs=235.1
Q ss_pred CCCcEEEEccceeecccCcCC-C-----Ccc-----------------CCCCceecCCChHHHHHHHHHHc---CCCcee
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG-L-----SLA-----------------ESPAFKKAPGGAPANVAVGIARL---GGSSAF 112 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~-~-----~~~-----------------~~~~~~~~~GG~~~N~A~~larL---G~~~~~ 112 (400)
++++|+|+|++++|++..+++ . +.. +...+...+||++.|+|++|++| |.++.+
T Consensus 31 ~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~ 110 (383)
T 2abs_A 31 GPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGY 110 (383)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEE
Confidence 446899999999999988765 1 111 13356778999999999999999 899999
Q ss_pred eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCcccc
Q 015777 113 IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 192 (400)
Q Consensus 113 i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~ 192 (400)
+|. ||+|.+|+++++.|+++||+++++. .++.+|+.+++.++ +|+|+++.+ .++...
T Consensus 111 ig~-------------------vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~ 167 (383)
T 2abs_A 111 MGA-------------------IGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGS 167 (383)
T ss_dssp EEE-------------------ECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGG
T ss_pred EEE-------------------ecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhh
Confidence 999 9999999999999999999999886 45669999999987 788887665 455555
Q ss_pred CCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhh-CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE
Q 015777 193 LQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK 271 (400)
Q Consensus 193 l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~ 271 (400)
+++++...+.+++++++|++++... .+.+.+.++++.+++ .|+++++|+.. ..| .+..++.+.++++++|+++
T Consensus 168 l~~~~~~~~~l~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~--~~~--~~~~~~~l~~ll~~~dil~ 241 (383)
T 2abs_A 168 FRLPEDWTTFASGALIFYATAYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSA--PFC--VELYKDAMQSLLLHTNILF 241 (383)
T ss_dssp CCCCTTHHHHTTTCCEEEEEGGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCC--HHH--HHHCHHHHHHHHHTCSEEE
T ss_pred CChhhhhHHHhhcCCEEEEeeeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCc--HHH--HHHHHHHHHHHHhhCCEEe
Confidence 6655444467889999999887553 335788889999999 89999999852 112 1233456677899999999
Q ss_pred cCHhHHhcccCCCC---------------CcHHHHHHHHHh------C-CCcEEEEEecCCcEEEE-----eCCceEEEc
Q 015777 272 ISEEEISFLTQGED---------------PYDDAVVYKLFH------A-NLKLLLVTEGPDGCRYY-----TKDFSGRVQ 324 (400)
Q Consensus 272 ~N~~E~~~l~~~~~---------------~~~~~~~~~l~~------~-g~~~vvvT~G~~G~~~~-----~~~~~~~vp 324 (400)
+|++|++.|++... .+.+++++++.+ . |++.||||+|++|++++ .+++.+++|
T Consensus 242 pN~~Ea~~L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~ 321 (383)
T 2abs_A 242 GNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVG 321 (383)
T ss_dssp EEHHHHHHHHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCHHHHHHHhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEec
Confidence 99999999976431 112345566766 4 89999999999999998 555677889
Q ss_pred cccc---cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCC
Q 015777 325 GLKV---EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 382 (400)
Q Consensus 325 a~~v---~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~ 382 (400)
++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+.
T Consensus 322 ~~~v~~~~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 322 VPVVAAEKIVDTNGAGDAFVGGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp CCCCCGGGCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred CccCCcCCcCcCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCcc
Confidence 8877 8999999999999999999999999 9999999999999999999986
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=326.85 Aligned_cols=276 Identities=18% Similarity=0.277 Sum_probs=227.5
Q ss_pred CCcEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
+++|+|+|++++|++..+++.|... .......+||++.|+|++|+|||.++.++|. +
T Consensus 17 ~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~-------------------v 77 (312)
T 2hlz_A 17 GSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGS-------------------M 77 (312)
T ss_dssp CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEE-------------------E
T ss_pred CCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEE-------------------e
Confidence 4579999999999998887765432 3345678999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEc-CCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR-SDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~-~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
|+|.+|+++++.|+++||+++++...++.+|++++++++ .+|+|+++++++ ....+++++++...+++++++|++++
T Consensus 78 G~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~--~~~~~~~~~~~~~~l~~~~~v~~~~~ 155 (312)
T 2hlz_A 78 APGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDR--SLPDVSATDFEKVDLTQFKWIHIEGR 155 (312)
T ss_dssp CSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECC--CCCCCCHHHHHTSCGGGEEEEEEECS
T ss_pred cCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCC--ccccCCHHHhhHhhhccCCEEEEecc
Confidence 999999999999999999999998876667777777665 579999888743 34556777666556788999999886
Q ss_pred cccCchhHHHHHHHHHHHhhC--------CCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC
Q 015777 215 SLITEPCKSAHIAAAKAAKDA--------GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP 286 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~--------g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~ 286 (400)
. .+...++++.+++. ++++++|+... ++.+.++++++|++++|++|++.+ +. .
T Consensus 156 ~------~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~--~ 216 (312)
T 2hlz_A 156 N------ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GF--Q 216 (312)
T ss_dssp S------HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TC--C
T ss_pred C------HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CC--C
Confidence 3 24556677777665 78999998532 235667899999999999999987 54 2
Q ss_pred cHHHHHHHHHhCCC--cEEEEEecCCcEEEEeC-CceEEEccc-cccccCCCCchHHHHHHHHHHHHcCCccccchHHHH
Q 015777 287 YDDAVVYKLFHANL--KLLLVTEGPDGCRYYTK-DFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362 (400)
Q Consensus 287 ~~~~~~~~l~~~g~--~~vvvT~G~~G~~~~~~-~~~~~vpa~-~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~ 362 (400)
+.++.++.+.+.+. +.|+||+|++|++++++ ++.+++|++ +++++|||||||+|.|+|+++|++|++ ++
T Consensus 217 ~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~ 289 (312)
T 2hlz_A 217 SAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQ 289 (312)
T ss_dssp SHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HH
T ss_pred CHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HH
Confidence 34566777766543 89999999999999875 457789986 468999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHhcccCCC
Q 015777 363 DALRFANACGALTVMERGAI 382 (400)
Q Consensus 363 ~al~~A~a~Aa~~v~~~G~~ 382 (400)
+|+++|+++|+++|++.|+.
T Consensus 290 ~a~~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 290 EALRFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp HHHHHHHHHHHHHHTSSSSG
T ss_pred HHHHHHHHHHHHHHhhcCcc
Confidence 99999999999999999963
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-42 Score=331.32 Aligned_cols=292 Identities=17% Similarity=0.226 Sum_probs=231.8
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCC-CceeeecccccccccceeeeccCCCcCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGG-SSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~-~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
|+|+|+|||++++|++.... ......+||++.|+|+++++||. ++.++|. +|+
T Consensus 1 M~~~ilviG~~~iD~~~~~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~-------------------vG~ 54 (313)
T 3kd6_A 1 MSLSLLVIGSLAFDDIETPF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGV-------------------VGS 54 (313)
T ss_dssp --CCEEEESCCEEEEEECSS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEE-------------------EET
T ss_pred CCccEEEEeEEEEeeecCCC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEe-------------------cCC
Confidence 34689999999999997532 24578999999999999999999 9999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEE--EcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVT--LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~--~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
| +|+++++.|+++||+++++.+.++.+|....-. .+.++++.+... .+....+.++ + .+.++++|++|++++.
T Consensus 55 D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~~ 129 (313)
T 3kd6_A 55 D-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNID 129 (313)
T ss_dssp T-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSSC
T ss_pred C-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCCC
Confidence 9 999999999999999999988876677432111 233445554443 2333333332 2 3568899999998753
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
.+...++++.+ +.+.++++||. .+|. +...+.+.++++++|++++|++|++.|++.. +.++.++.+
T Consensus 130 ------~~~~~~~~~~~-~~~~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l 195 (313)
T 3kd6_A 130 ------PELQLKVLDQI-DDPKLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDP--NLVKTARII 195 (313)
T ss_dssp ------HHHHHHHHTTC-SSCSEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS--CHHHHHHHH
T ss_pred ------HHHHHHHHHHH-hhCCEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC--CHHHHHHHH
Confidence 23445666666 57889999983 2231 2234667778999999999999999999865 346778889
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccc-cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGAL 374 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~ 374 (400)
++.|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|.++ .+.++++|+++|+++|++
T Consensus 196 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~--~~~~l~~a~~~a~~~aa~ 273 (313)
T 3kd6_A 196 REMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT--SEAEMRKAVLYGSAMASF 273 (313)
T ss_dssp HTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCc--cccCHHHHHHHHHHHHHH
Confidence 999999999999999999999998999999998 79999999999999999999998820 122399999999999999
Q ss_pred HhcccCCCCC-CCCHHHHHHHHhC
Q 015777 375 TVMERGAIPA-LPTREAVLNAIHA 397 (400)
Q Consensus 375 ~v~~~G~~~~-~p~~~~l~~~l~~ 397 (400)
+|++.|+.+. .|++++|++++++
T Consensus 274 ~v~~~G~~~~~~~~~~ev~~~l~~ 297 (313)
T 3kd6_A 274 CVEQFGPYRYNDLDLLEVDDRYQS 297 (313)
T ss_dssp HTTSSTTGGGGTCCHHHHHHHHHH
T ss_pred HHeecCCCCCCCCCHHHHHHHHHH
Confidence 9999998753 5899999998865
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-41 Score=321.80 Aligned_cols=285 Identities=21% Similarity=0.252 Sum_probs=233.9
Q ss_pred cEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
=+.+.|++++|++..++++... ....+...+||++.|+|++++|||.++.++|. +|+
T Consensus 2 i~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~-------------------vG~- 61 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGF-------------------LGG- 61 (306)
T ss_dssp EEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEE-------------------EEH-
T ss_pred EEEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEE-------------------ecc-
Confidence 3677899999999998875221 24467788999999999999999999999999 998
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hh---cCCccEEEEcc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL---ITKAKIFHYGS 213 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~---i~~~~~v~~~~ 213 (400)
.+|+++++.|+++||+++++...++ |++++++ .+|+++++.. .+. .+++++++. +. ++++|++|+++
T Consensus 62 ~~g~~i~~~L~~~gv~~~~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g 133 (306)
T 2abq_A 62 FTGAYVRNALEKEEIGLSFIEVEGD--TRINVKI--KGKQETELNG--TAP--LIKKEHVQALLEQLTELEKGDVLVLAG 133 (306)
T ss_dssp HHHHHHHHHHHHTTCEECCEEESSC--CEEEEEE--ESSSCEEEBC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred hhHHHHHHHHHHcCCceEEEEcCCC--CceEEEE--eCCceEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEec
Confidence 8999999999999999999987543 5666655 4788865443 333 355554432 11 57899999866
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhcccCCCCCcH---H
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---D 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~l~~~~~~~~---~ 289 (400)
+... ..+.+.+.++++.++++|+++++||+ . +.+.++++ ++|++++|++|++.|++....+. .
T Consensus 134 ~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~--------~----~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 200 (306)
T 2abq_A 134 SVPQ-AMPQTIYRSMTQIAKERGAFVAVDTS--------G----EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAI 200 (306)
T ss_dssp CCCT-TSCTTHHHHHHHHHHTTTCEEEEECC--------H----HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHH
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCEEEEECC--------h----HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHH
Confidence 5332 23346778889999999999999995 2 23456788 99999999999999998754332 3
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++++++.|++.|+||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+
T Consensus 201 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~ 273 (306)
T 2abq_A 201 PHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAV 273 (306)
T ss_dssp HHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 4567888889999999999999999988888899999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++. ++|++++++++++++
T Consensus 274 a~aa~~v~~~----~~p~~~ev~~~~~~~ 298 (306)
T 2abq_A 274 AAGSATAFSD----GFCTREEVERLQQQL 298 (306)
T ss_dssp HHHHHHHHSS----SCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCc----CCCCHHHHHHHHhhE
Confidence 9999999998 468999999988764
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=318.77 Aligned_cols=285 Identities=20% Similarity=0.253 Sum_probs=232.4
Q ss_pred cEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
-+.|.|++++|++..++++... ....+...+||++.|+|++++|||.++.++|. +|+
T Consensus 2 i~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~-------------------vG~- 61 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGF-------------------AGG- 61 (306)
T ss_dssp EEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEE-------------------ECH-
T ss_pred EEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEE-------------------ecC-
Confidence 4678899999999998874211 24567888999999999999999999999999 999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch---hh--cCCccEEEEcc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL---SL--ITKAKIFHYGS 213 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~---~~--i~~~~~v~~~~ 213 (400)
.+|+++++.|+++||+++++...++ |++++++ .+|++.++.. .++ .+.+++++. .+ ++++|++|+++
T Consensus 62 ~~g~~i~~~l~~~gv~~~~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g 133 (306)
T 2jg5_A 62 FPGKFIIDTLNNSAIQSNFIEVDED--TRINVKL--KTGQETEINA--PGP--HITSTQFEQLLQQIKNTTSEDIVIVAG 133 (306)
T ss_dssp HHHHHHHHHHHHTTCEECCEECSSC--CEEEEEE--ESSSEEEEEC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred cchHHHHHHHHHCCCceeEEEcCCC--CeEEEEE--cCCCEEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEeC
Confidence 7999999999999999999877543 5556554 4788765544 333 245554432 11 57899999876
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhcccCCCCCcH---H
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---D 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~l~~~~~~~~---~ 289 (400)
.... ..+.+...++++.++++|+++++||+. . .+.++++ ++|++++|++|++.|++....+. .
T Consensus 134 ~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~----~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 200 (306)
T 2jg5_A 134 SVPS-SIPSDAYAQIAQITAQTGAKLVVDAEK--------E----LAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVI 200 (306)
T ss_dssp CCCT-TSCTTHHHHHHHHHHHHCCEEEEECCH--------H----HHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHH
T ss_pred CCCC-CCChHHHHHHHHHHHHCCCEEEEECCh--------H----HHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHH
Confidence 5332 223457778889999999999999862 2 2444566 69999999999999998764332 3
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.+++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+
T Consensus 201 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~ 273 (306)
T 2jg5_A 201 KYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAV 273 (306)
T ss_dssp HHHHHHHHTTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 4567788899999999999999999988888899999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++.| +|++++++++++++
T Consensus 274 a~aa~~v~~~G----~~~~~ev~~~~~~~ 298 (306)
T 2jg5_A 274 ACGTATAFDED----LATRDAIEKIKSQV 298 (306)
T ss_dssp HHHHHHHTSSS----SCCHHHHHHHHTTC
T ss_pred HHHHHHHcCCC----CCCHHHHHHHHhce
Confidence 99999999999 58999999998775
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=301.90 Aligned_cols=278 Identities=18% Similarity=0.118 Sum_probs=217.0
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
-.|.++|....|.+.+.. .+...+||++.|+|++|+|||.++.++|. +|+|.
T Consensus 12 ~~~~~~~~~~~~~~~~~~--------~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D~- 63 (298)
T 1vk4_A 12 HMITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITK-------------------CTRED- 63 (298)
T ss_dssp SEEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEE-------------------ECTTT-
T ss_pred eeEEEeccccCceEeecC--------eEEEecCCHHHHHHHHHHHcCCceEEEEE-------------------EcCCH-
Confidence 358999999999887643 45788999999999999999999999999 99997
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCch
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEP 220 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~ 220 (400)
+.+++.|+++||+++++.. +.+|+++.++ +++|++++..+.. +...+++++++. ..++++|++++... +.
T Consensus 64 -~~~~~~L~~~gVd~~~v~~--~~~t~~~~i~-~~~g~~~~~~~~~--~~~~l~~~~~~~---~~~~~v~~~~~~~~-~~ 133 (298)
T 1vk4_A 64 -VSKFSFLRDNGVEVVFLKS--PRTTSIENRY-GSDPDTRESFLIS--AADPFTESDLAF---IEGEAVHINPLWYG-EF 133 (298)
T ss_dssp -GGGGTTTGGGTCEEEEEEC--SSCEEEEEEC------CCEEEEEE--CCCCCCGGGGGG---CCSSEEEECCSSTT-SS
T ss_pred -HHHHHHHHHcCCceEEEec--CCCcEEEEEE-cCCCCeeEEEecc--ccccCCHHHcCc---CCCCEEEECCcccc-cc
Confidence 7889999999999998754 3466666655 5578887766533 334566666542 67999999887432 22
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCC-CCCCCCh--HHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLR-LPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~-~~~~~~~--~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
..++++.++++|+++++|++.. ..+|... ....+.+.++++++|++++|++|++.|++.. +.+++++.+.+
T Consensus 134 ----~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~ 207 (298)
T 1vk4_A 134 ----PEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTN--DLRESCRIIRS 207 (298)
T ss_dssp ----CGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSCS--CHHHHHHHHHH
T ss_pred ----cHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCCC--CHHHHHHHHHh
Confidence 2355667788899999999621 0001000 0001235567889999999999999999875 34567788889
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHh
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~-g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
.|++.|+||+ ++|++++.+ +.+++|+++++++|||||||+|.|||+++|++ |++ +++|+++|+++|++++
T Consensus 208 ~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~aa~~v 278 (298)
T 1vk4_A 208 FGAKIILATH-ASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKM 278 (298)
T ss_dssp TTCSSEEEEE-TTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEc-CCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 9999999999 999999887 78899999999999999999999999999999 999 9999999999999999
Q ss_pred cccCCCCCCCCHHHHH
Q 015777 377 MERGAIPALPTREAVL 392 (400)
Q Consensus 377 ~~~G~~~~~p~~~~l~ 392 (400)
++.|+.+. |+++++.
T Consensus 279 ~~~G~~~~-~~~~el~ 293 (298)
T 1vk4_A 279 RHPGPLRR-EDLEAIS 293 (298)
T ss_dssp TSSSSCCG-GGGGGCC
T ss_pred ccCCCCCC-CCHHHHh
Confidence 99998765 6776654
|
| >2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-25 Score=209.54 Aligned_cols=216 Identities=17% Similarity=0.125 Sum_probs=159.9
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------h--hcCCc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------S--LITKA 206 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~--~i~~~ 206 (400)
+|.| ..+..|++.||++.++.. . +..+.+|.+.+.. ..++.+++.. + .++++
T Consensus 30 ~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~~g-------~~~~~~~~~~~~~~l~~~~~~~~~ 89 (283)
T 2ddm_A 30 VGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTFYG-------GAIPDEWFSGYLRALQERDALRQL 89 (283)
T ss_dssp STHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCCCE-------EECCHHHHHHHHHHHHHTTCCTTC
T ss_pred chHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCceee-------eeCCHHHHHHHHHHHHhcCCcccC
Confidence 8886 356789999999887642 1 2224556554211 1233333321 1 46688
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCC---CCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 207 KIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 207 ~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
++++++.+.. ....+.+.++++.+++ .|+++++||+++. ..|.+.+.......++++++|++++|++|++.|+
T Consensus 90 ~~v~~G~l~~--~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~ 167 (283)
T 2ddm_A 90 RAVTTGYMGT--ASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILT 167 (283)
T ss_dssp CEEEECCCSC--HHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHH
T ss_pred CEEEECCcCC--HHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHh
Confidence 9999987543 2345677788888887 7899999998764 4554332233333457899999999999999999
Q ss_pred CCCCCc---HHHHHHHHHhCCCcEEEEEecCC-------cEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC
Q 015777 282 QGEDPY---DDAVVYKLFHANLKLLLVTEGPD-------GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351 (400)
Q Consensus 282 ~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~-------G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g 351 (400)
|....+ ..+.++++.+.|++.|+||.|++ |++++++++.+++++++++ +||+||||+|.|+|++++++|
T Consensus 168 g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~g 246 (283)
T 2ddm_A 168 GKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLKG 246 (283)
T ss_dssp TSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHcC
Confidence 976433 23456778888999999999999 8999888888889988886 899999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhcccC
Q 015777 352 FSLLQKEDQLRDALRFANACGALTVMERG 380 (400)
Q Consensus 352 ~~~~~~~~~l~~al~~A~a~Aa~~v~~~G 380 (400)
++ +++|+++|+++++.++++..
T Consensus 247 ~~-------~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 247 KA-------LTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp CC-------HHHHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999998753
|
| >2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=212.89 Aligned_cols=211 Identities=17% Similarity=0.100 Sum_probs=154.8
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceec--CCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hh-----cCC
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFD--PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL-----ITK 205 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~--~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~-----i~~ 205 (400)
+|+|. |+++ |+++||+++++... .+ +|++.+ + .+ ..+++++++. +. +++
T Consensus 19 vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~-------------~--~g--~~l~~~~i~~~~~~~~~~~~~~ 76 (312)
T 2yxt_A 19 VGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH-------------W--KG--QVLNSDELQELYEGLRLNNMNK 76 (312)
T ss_dssp STHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC-------------C--CE--EECCHHHHHHHHHHHHHTTCCC
T ss_pred cchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC-------------c--cC--ccCCHHHHHHHHHHHHhcCCcc
Confidence 99998 9998 99999999887653 21 232111 1 11 1244444431 11 678
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCC--eEEEeCCCCCC------CCCChHHHHHhHHh-hhccCcEEEcCHhH
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGV--VLSYDPNLRLP------LWPSADKAREGILS-IWETADIIKISEEE 276 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~--~v~~D~~~~~~------~~~~~~~~~~~~~~-ll~~~dvl~~N~~E 276 (400)
+++++++.+. .+...+.+.++++.++++|. ++++||+.+.. +|.. +.+.+.+.+ +++++|++++|++|
T Consensus 77 ~~~v~~G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~dil~pN~~E 153 (312)
T 2yxt_A 77 YDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADIITPNQFE 153 (312)
T ss_dssp CSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSEECCCHHH
T ss_pred CCEEEECCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCEEcCCHHH
Confidence 9998876543 22335666688888888875 48999987643 3432 234556664 89999999999999
Q ss_pred HhcccCCCCCc---HHHHHHHHHhCCCcEEEEEecCC------cEEEE-------eC-C----ceEEEccccccccCCCC
Q 015777 277 ISFLTQGEDPY---DDAVVYKLFHANLKLLLVTEGPD------GCRYY-------TK-D----FSGRVQGLKVEAVDATG 335 (400)
Q Consensus 277 ~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~------G~~~~-------~~-~----~~~~vpa~~v~vvDttG 335 (400)
++.|+|....+ ..++++++++.|++.|+||.|+. |++++ ++ + +.+++|++++++ ||||
T Consensus 154 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-dttG 232 (312)
T 2yxt_A 154 AELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-VFVG 232 (312)
T ss_dssp HHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSS-CCSS
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCC-CCCC
Confidence 99999975433 24556778888999999998886 47765 44 2 567889888887 9999
Q ss_pred chHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 336 AGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 336 AGDaF~Agfl~~l~~-g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|||+|.|+|+++|++ |++ +++|+++|+++++.+++.
T Consensus 233 AGDaf~a~~~~~l~~~g~~-------l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 233 TGDLFAAMLLAWTHKHPNN-------LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp HHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999 999 999999999999888764
|
| >1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=187.49 Aligned_cols=160 Identities=16% Similarity=0.116 Sum_probs=125.0
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCe-EEEeCCCCC----CCCCChHHHHHhHHh-hhccCcEEEcCHhHHhc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEEEISF 279 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~----~~~~~~~~~~~~~~~-ll~~~dvl~~N~~E~~~ 279 (400)
+|+++++.+. +.+....+++.+++.+++ +++||+.+. .+|. +...+.+.+ +++++|++++|+.|++.
T Consensus 95 ~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~--~~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGMLA-----ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS--PSAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC--HHHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC--HHHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 6888877532 356778888999999986 999998764 2342 223344543 78899999999999999
Q ss_pred ccCC-CCCc---HHHHHHHHHhCCCcEEEEEecCCc-----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 280 LTQG-EDPY---DDAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 280 l~~~-~~~~---~~~~~~~l~~~g~~~vvvT~G~~G-----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
|++. ...+ ..++++++.+.|++.|+||.|.+| ++++++++.+++++++++++||+||||+|.|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9987 4433 234567888899999999999999 888887778889998899999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
|.+ +++|+++|+++++.+++..
T Consensus 248 g~~-------~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 248 HRS-------WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SSS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999776
|
| >1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.8e-22 Score=184.91 Aligned_cols=161 Identities=19% Similarity=0.154 Sum_probs=127.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCC----CCCChHHHHHhH-HhhhccCcEEEcCHhHHh
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLP----LWPSADKAREGI-LSIWETADIIKISEEEIS 278 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~----~~~~~~~~~~~~-~~ll~~~dvl~~N~~E~~ 278 (400)
+.+.++++.+. +.+....+++.+++.+ +++++||+++.. +|. +...+.+ .++++++|++++|+.|++
T Consensus 70 ~~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~--~~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGALG-----DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA--KEAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEECCCC---------C--HHHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC--hHHHHHHHHhhcccCeEEeCCHHHHH
Confidence 46788777532 3456777888888888 899999987643 343 1222344 457889999999999999
Q ss_pred cccCCCCCcH---HHHHHHHHhCCCcEEEEEecCC-c----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 279 FLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD-G----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 279 ~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~-G----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
.|+|....+. .+.++++.+.|++.|++|.|++ | ++++++++.+++++++++++||+||||+|.|+|++++++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9999764332 3456778888999999999998 9 788888888889999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
|++ +++|+++|+++++.++++.
T Consensus 223 g~~-------~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 GRP-------LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999988753
|
| >2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.3e-21 Score=178.86 Aligned_cols=163 Identities=16% Similarity=0.132 Sum_probs=133.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCC-eEEEeCCCCCCCCCC--hHHHHHhHH-hhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLPLWPS--ADKAREGIL-SIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~~~~~--~~~~~~~~~-~ll~~~dvl~~N~~E~~~l 280 (400)
+.|.++++.+. . .+....+++.+++.+. ++++||+.+...|.. .+...+.+. ++++++|++++|+.|++.|
T Consensus 74 ~~d~v~~G~l~--~---~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGMLP--T---VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCCC--S---HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCCC--C---HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 67888887542 1 4677788888888898 699999887655432 122334554 6789999999999999999
Q ss_pred cCCC-CCc---HHHHHHHHHhCCCcEEEEEecC--CcE----EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGE-DPY---DDAVVYKLFHANLKLLLVTEGP--DGC----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~-~~~---~~~~~~~l~~~g~~~vvvT~G~--~G~----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.. ..+ ..+.++++.+.|++.|++|.|. +|+ +++++++.+++++++++++||+||||+|.|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9976 332 2345678888899999999999 784 67777778889999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
|++ +++|+++|+++++.+++..
T Consensus 229 g~~-------~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-------VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999874
|
| >3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=168.22 Aligned_cols=164 Identities=16% Similarity=0.106 Sum_probs=130.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC--CCC-ChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP--LWP-SADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~--~~~-~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
+.|.+.+|-+ ......+.+.++++.+++.++++++||+.+.. +|. ..+...+.++++++++|+++||+.|++.|+
T Consensus 77 ~~~aik~G~l--~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGYL--GSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECCC--SSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 5788887643 23344567777777776678999999988754 454 235556677889999999999999999999
Q ss_pred CCCCC------cHHHHHHHHHhCCCcEEEEEecC-------CcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHH
Q 015777 282 QGEDP------YDDAVVYKLFHANLKLLLVTEGP-------DGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 282 ~~~~~------~~~~~~~~l~~~g~~~vvvT~G~-------~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
|.... +.++++++++++|++.|+||.|. .|+++++++ +.++++.+++. +|++|+||+|.|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 98642 23456788889999999999654 577888763 45677877775 8999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|++|.+ +++|+++|+++++.++..
T Consensus 234 ~l~~g~~-------l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 234 SLMQGDS-------LPMALDRATQFILQGIRA 258 (291)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999998888765
|
| >3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.5e-19 Score=165.96 Aligned_cols=161 Identities=17% Similarity=0.172 Sum_probs=127.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhh-CCCeEEEeCCCCC--CCCC-ChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKD-AGVVLSYDPNLRL--PLWP-SADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~--~~~~-~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.|.+.+|.+. . .+....+.+..++ .+.++++||+.+. .+|. ..+...+.++++++++|+++||+.|++.|
T Consensus 74 ~~daik~G~l~--s---~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L 148 (282)
T 3h74_A 74 HFDQALIGYVG--S---VALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALL 148 (282)
T ss_dssp CCSEEEECCCC--S---HHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHH
T ss_pred ccCEEEECCCC--C---HHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHH
Confidence 67888887542 2 3334444444444 4689999998874 3454 24555667778999999999999999999
Q ss_pred cCCCCC---cHHHHHHHHHh-CCC-cEEEEEecC----CcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGEDP---YDDAVVYKLFH-ANL-KLLLVTEGP----DGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~~~---~~~~~~~~l~~-~g~-~~vvvT~G~----~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.... +.+++++++.+ .|+ +.|+||.|. .|+++++ +++.++++.+++. +|++|+||+|.|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~ 227 (282)
T 3h74_A 149 TGAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGR 227 (282)
T ss_dssp HTCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHC
Confidence 997642 44667788888 899 999999995 7888885 6667788887775 89999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|++ +++|+++|+++++.+++.
T Consensus 228 g~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 228 GYP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHH
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999999998888865
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.6e-19 Score=166.87 Aligned_cols=165 Identities=19% Similarity=0.106 Sum_probs=130.3
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCCCC----CCCCChHHHHHhHHh-hhccCcEEEcCHh
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEE 275 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~----~~~~~~~~~~~~~~~-ll~~~dvl~~N~~ 275 (400)
+.+.|++..|.+ ......+.+.++++.+++++ +++++||..+. .+|. +...+.+++ +++++|+++||+.
T Consensus 75 l~~~d~v~~G~l--~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~ 150 (289)
T 3pzs_A 75 LKDCDAVLSGYI--GSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLL 150 (289)
T ss_dssp GGGCCEEEECCC--SSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHH
T ss_pred ccCCCEEEECCC--CCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHH
Confidence 357888877654 34445677788888888766 89999985432 2332 344555554 7899999999999
Q ss_pred HHhcccCCCCCcH---HHHHHHHHhCCCcEEEEEec-CCcE-------EEEeCCceEEEccccccc--cCCCCchHHHHH
Q 015777 276 EISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG-PDGC-------RYYTKDFSGRVQGLKVEA--VDATGAGDAFVA 342 (400)
Q Consensus 276 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G-~~G~-------~~~~~~~~~~vpa~~v~v--vDttGAGDaF~A 342 (400)
|++.|+|....+. .++++++.++|++.|+||.| .+|+ +++++++.++++.+++++ +|++||||+|.|
T Consensus 151 E~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a 230 (289)
T 3pzs_A 151 ELEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSG 230 (289)
T ss_dssp HHHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHH
Confidence 9999999875433 34567888899999999985 5787 777777788888887776 999999999999
Q ss_pred HHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 343 GILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 343 gfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|++++++|.+ +++|+++|+++++..+..
T Consensus 231 ~~~~~l~~g~~-------~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 231 LLLVNLLKGEP-------LDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999987777664
|
| >3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-17 Score=157.64 Aligned_cols=163 Identities=14% Similarity=0.058 Sum_probs=120.7
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCC------CeEEEeCCCCCC--CCCChHHHHHhHHhhhccCcEEEcCHh
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG------VVLSYDPNLRLP--LWPSADKAREGILSIWETADIIKISEE 275 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g------~~v~~D~~~~~~--~~~~~~~~~~~~~~ll~~~dvl~~N~~ 275 (400)
.++|.+..|.+. .....+.+.++++..++.+ .++++||..+.. +|. .+...+.++++++++|+++||..
T Consensus 75 ~~~daV~tG~l~--s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGYIN--NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECCCC--CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECCCC--CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHH
Confidence 468888776542 3334566667777776654 799999976543 554 34455667779999999999999
Q ss_pred HHhcccCCCCCcH---HHHHHHHHhCCCcEEEEEecCCc-------EEEEeC------CceEEEccccccccCCCCchHH
Q 015777 276 EISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG-------CRYYTK------DFSGRVQGLKVEAVDATGAGDA 339 (400)
Q Consensus 276 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G-------~~~~~~------~~~~~vpa~~v~vvDttGAGDa 339 (400)
|++.|+|.+..+. .+++++|+++|++.|+||.|..| +++..+ ++.++++.++++. |++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 9999999875443 34567888899999999999988 333334 4667788887776 89999999
Q ss_pred HHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 340 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 340 F~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|.|+|+++| +|.+ +++|+++|+++....+..
T Consensus 231 fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 231 FAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp HHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHH
Confidence 999999999 9999 999999999996666543
|
| >1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-14 Score=134.44 Aligned_cols=163 Identities=15% Similarity=0.014 Sum_probs=112.8
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~E~~ 278 (400)
+.++.++.+++..-. ..+...+.+.++++.+++.++++++||..... . ....+...++++ ++|+++||..|++
T Consensus 54 ~~~~~a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~-~~~~~~~~~ll~~~~~~vitPN~~E~~ 128 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---T-PFRTESARDIIREVRLAAIRGNAAEIA 128 (272)
T ss_dssp HHHHHSSEEEEECTT-CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---B-HHHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhCCEEEEECCC-CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---c-cchHHHHHHHHccCCCeEECCCHHHHH
Confidence 455678887763322 23334567778888888999999999964211 1 111233345666 8999999999999
Q ss_pred cccCCC-C--------Cc---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHH
Q 015777 279 FLTQGE-D--------PY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 279 ~l~~~~-~--------~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
.|+|.. . .+ ..+.++++.+++...|++| |..+ +++++++.++++.....+.|++|+||+|.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa 206 (272)
T 1ekq_A 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (272)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHH
Confidence 999875 3 11 2345566766654555555 9887 5556667788887777788999999999888888
Q ss_pred HHHcCCccccchHHHHHHHHHHHH----HHHHHhc
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANA----CGALTVM 377 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a----~Aa~~v~ 377 (400)
.+.+|.+ +.+|+++|+. ++.....
T Consensus 207 ~la~g~~-------~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 207 FCAVEEN-------PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHTTCSS-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHHHHh
Confidence 8888999 9999999986 5544444
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.9e-14 Score=145.33 Aligned_cols=159 Identities=18% Similarity=0.080 Sum_probs=117.1
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCChHHHHHhHH-hhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGIL-SIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~-~ll~~~dvl~~N~~E~~~ 279 (400)
+.|.|.+|.+ .....+.+.++++..++.+.++++||+.+. .++. +...+.+. ++++.+|+|+||..|++.
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~--~~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAG--KDIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------C--TTHHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCC--HHHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6788888754 444455666777766666899999997642 2221 22334444 688999999999999999
Q ss_pred ccCCC--CC---cHHHHHHHHHhCCC-cEEEEEecCCc--------E--EEE--eCCceEEEccccccccCCCCchHHHH
Q 015777 280 LTQGE--DP---YDDAVVYKLFHANL-KLLLVTEGPDG--------C--RYY--TKDFSGRVQGLKVEAVDATGAGDAFV 341 (400)
Q Consensus 280 l~~~~--~~---~~~~~~~~l~~~g~-~~vvvT~G~~G--------~--~~~--~~~~~~~vpa~~v~vvDttGAGDaF~ 341 (400)
|+|.. .. +..++++++.++|. +.|+||.|..+ + +++ .+++.++++.++++.+|++|+||+|.
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLA 245 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHH
Confidence 99974 22 23456678888876 89999998863 3 455 34566778888888899999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 342 AGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 342 Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
|+|++.|++|.+ +++|+++|+..-...
T Consensus 246 aaiaa~La~G~~-------l~eAv~~A~~~v~~a 272 (550)
T 3rm5_A 246 SAIASNLARGYS-------LPQSVYGGIEYVQNA 272 (550)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 999999999999 999999999643333
|
| >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-10 Score=108.12 Aligned_cols=146 Identities=16% Similarity=0.031 Sum_probs=99.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISF 279 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~ 279 (400)
+.++.+|.+.++.- +..+...+.+..+++.+++.++++++||..... .. ...+...++++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G-~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~~-~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEEC-CCCHHHHHHHHHHHHHHHHcCCcEEEcCccccc---cc-cCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 55677888887532 223323345667778888899999999964221 11 11222333443 39999999999999
Q ss_pred ccCCCC------------CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 280 LTQGED------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 280 l~~~~~------------~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
|+|... .+..+.++++.+++...|++| |..+. ++++++.++++.......+++|+||+|.|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 988542 112345667776665667777 87764 4566667777766555679999999999999999
Q ss_pred HHcCCc
Q 015777 348 LSTDFS 353 (400)
Q Consensus 348 l~~g~~ 353 (400)
+.+|.+
T Consensus 205 lA~g~~ 210 (265)
T 1v8a_A 205 VAVTEP 210 (265)
T ss_dssp HTTSCH
T ss_pred HhcCCC
Confidence 999874
|
| >3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.4e-09 Score=102.40 Aligned_cols=172 Identities=13% Similarity=0.087 Sum_probs=104.4
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhh-h-ccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI-W-ETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l-l-~~~dvl~~N~~E~~ 278 (400)
+.++..|.+.++.-....+...+.+.++++..+ .++++++|+. ...+...-.++ + +.+++|+||..|++
T Consensus 121 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~l~L~~~~~viTPN~~E~~ 191 (311)
T 3bgk_A 121 EQITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGS--------AINLLAKRKPAIWPTKQIILTPHQKEWE 191 (311)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETH--------HHHHHHHCC-CCCSCSCEEEECCSCC-C
T ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCC--------hhhhhccChhhcCCCCCEEECCcHHHHH
Confidence 344567888886311112222344555555443 5899999983 22222211111 3 47899999999999
Q ss_pred cccCCCCCcH-H----HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHH-Hc-C
Q 015777 279 FLTQGEDPYD-D----AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL-ST-D 351 (400)
Q Consensus 279 ~l~~~~~~~~-~----~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l-~~-g 351 (400)
.|+|....+. + +.++++.+ + .+|+..| .+.++++ ++.+++.....+..+++|+||+| +|+++++ .+ |
T Consensus 192 ~L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~~g 265 (311)
T 3bgk_A 192 RLSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTL-AGMIAGFVAQFH 265 (311)
T ss_dssp TTTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHH-HHHHHHHHHHCC
T ss_pred HHhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHH-HHHHHHHHHccC
Confidence 9999765432 2 23344444 3 3444445 5677777 44445556667788999999997 5566655 58 9
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhcc---cCCCCCCCCHHHHHHHHhC
Q 015777 352 FSLLQKEDQLRDALRFANACGALTVME---RGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 352 ~~~~~~~~~l~~al~~A~a~Aa~~v~~---~G~~~~~p~~~~l~~~l~~ 397 (400)
.+ +.+|+++|+.+.+..-.. .| . + ....+|.+.|.+
T Consensus 266 ~~-------~~eA~~~A~~~~~~ag~~a~~~g-~-~-~~a~dl~~~l~~ 304 (311)
T 3bgk_A 266 TD-------RFEVAAAAVFLHSYIADQLSKEA-Y-V-VLPTRISAEITR 304 (311)
T ss_dssp SC-------HHHHHHHHHHHHHHHHHHHHTTC-S-S-CCHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHHHHhhC-C-C-CCHHHHHHHHHH
Confidence 99 999999997766653321 24 2 3 367777776643
|
| >3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-08 Score=94.74 Aligned_cols=166 Identities=14% Similarity=-0.024 Sum_probs=110.7
Q ss_pred ccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcE
Q 015777 191 MLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADI 269 (400)
Q Consensus 191 ~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dv 269 (400)
|...++++. ++.+.++.++++.-. ..+...+.+..+++.+++.++|+++||..... +..+ .+...+++ ..+++
T Consensus 45 M~~~~~e~~-e~~~~a~alvIn~G~-l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~~r-~~~~~~Ll~~~~~V 118 (273)
T 3dzv_A 45 MADDPREFP-QMFQQTSALVLNLGH-LSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SDIR-NEVGEKLVHNQPTV 118 (273)
T ss_dssp CCCCGGGHH-HHHTTCSEEEEECCS-CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CHHH-HHHHHHHHHTCCSE
T ss_pred hcCCHHHHH-HHHHHCCeEEEecCC-CChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---cccC-HHHHHHHHhcCCcE
Confidence 333444443 677788888876422 33333466777788899999999999964322 1111 12222222 37899
Q ss_pred EEcCHhHHhcccCCCCC-----------------cHHHHHHHHHhCCC-cEEEEEecCCcEEEEeCCceEEEcccccccc
Q 015777 270 IKISEEEISFLTQGEDP-----------------YDDAVVYKLFHANL-KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAV 331 (400)
Q Consensus 270 l~~N~~E~~~l~~~~~~-----------------~~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vv 331 (400)
|++|..|+..|+|.... +..+.++++.++.. ..|++|-+. -+++++++.+.++.-....-
T Consensus 119 ItpN~~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--D~i~dg~~~~~~~~G~~~~~ 196 (273)
T 3dzv_A 119 VKGNLSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--DVLVSQEQVIVLQNGVPELD 196 (273)
T ss_dssp EEEEHHHHHHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--EEEECSSCEEEECCCCGGGG
T ss_pred ECCCHHHHHHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--eEEEcCCEEEEeCCCCcccC
Confidence 99999999999986531 11234566766555 677777543 24555566667765544556
Q ss_pred CCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 332 DATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 332 DttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+++|.||++.|.+.+.+.+|.+ +.+|+..|...
T Consensus 197 ~v~GtGc~Ls~~Iaa~lA~g~~-------~~~Aa~~A~~~ 229 (273)
T 3dzv_A 197 CFTGTGDLVGALVAALLGEGNA-------PMTAAVAAVSY 229 (273)
T ss_dssp SSTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHH
T ss_pred CcCCchHHHHHHHHHHHhCCCC-------HHHHHHHHHHH
Confidence 6799999999999999999999 88888877654
|
| >2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-09 Score=101.09 Aligned_cols=170 Identities=11% Similarity=-0.013 Sum_probs=102.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh--ccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW--ETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll--~~~dvl~~N~~E~~ 278 (400)
+.++.+|.+.++.-....+...+.+.++++..+ .++++++|+. ...+...-.+++ +.+++|+||..|++
T Consensus 107 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~~l~~~~~~viTPN~~E~~ 177 (310)
T 2r3b_A 107 NVVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGS--------AITLFSQGNFSLTYPEKVVFTPHQMEWQ 177 (310)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETH--------HHHHHHHTTCCCSSGGGEEEECCHHHHH
T ss_pred HHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCC--------cchhcccchhhhcCCCCEEEcCCHHHHH
Confidence 344567888876311112222344555555443 5899999983 222222101122 46889999999999
Q ss_pred cccCCCCCcH-----HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHH-HcCC
Q 015777 279 FLTQGEDPYD-----DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL-STDF 352 (400)
Q Consensus 279 ~l~~~~~~~~-----~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l-~~g~ 352 (400)
.|+|....+. .++++++ ++ +|+..| .+.++++ ++..++.....+..+++|+||++ +|+++++ .+|.
T Consensus 178 ~L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG-~~~vi~~-~~~~~~~~~g~~~~~t~GtGD~L-ag~Iaa~lA~g~ 249 (310)
T 2r3b_A 178 RLSHLPIEQQTLANNQRQQAKL---GS--TIVLKS-HRTTIFH-AGEPFQNTGGNPGMATGGTGDTL-AGIIAGFLAQFK 249 (310)
T ss_dssp HHHCCCGGGCCHHHHHHHHHHH---TS--EEEECS-TTCEEEC-SSSCEECCCCCGGGCSTTHHHHH-HHHHHHHHHHSC
T ss_pred HHhCCCCCcccchHHHHHHHHh---Cc--EEEEeC-CceEEEE-CCEEEEECCCCCCCCCCChHHHH-HHHHHHHHHcCC
Confidence 9999764322 2333444 43 455555 5566666 43334555566778999999997 5555555 5899
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc---ccCCCCCCCCHHHHHHHHhC
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM---ERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~---~~G~~~~~p~~~~l~~~l~~ 397 (400)
+ +.+|+++|+.+.+..-. ..| .+ ....+|.+.|.+
T Consensus 250 ~-------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~~ 287 (310)
T 2r3b_A 250 P-------TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQALPT 287 (310)
T ss_dssp S-------SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHHHH
T ss_pred C-------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHHH
Confidence 9 89999998766665332 224 23 356777666543
|
| >3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.4e-07 Score=88.48 Aligned_cols=171 Identities=15% Similarity=0.033 Sum_probs=108.2
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
.++++|++.++.- +..+ +...++++.+.+.+.++++|...-.. +.+. .....+|++||..|++.|+
T Consensus 95 ~l~~~davviGPG-lg~~---~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~-~~~~~~vlTPN~~E~~~L~ 160 (279)
T 3rpz_A 95 LEETYRAIAIGPG-LPQT---ESVQQAVDHVLTADCPVILDAGALAK---------RTYP-KREGPVILTPHPGEFFRMT 160 (279)
T ss_dssp CSSCCSEEEECTT-CCCC---HHHHHHHHHHTTSSSCEEECGGGCCS---------CCCC-CCSSCEEECCCHHHHHHHH
T ss_pred hccCCCEEEECCC-CCCC---HHHHHHHHHHHhhCCCEEEECCccch---------hhhh-hccCCEEEecCHHHHHHHh
Confidence 4578899988742 2221 23345666666778899999852110 0111 1246789999999999999
Q ss_pred CCCCC----cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 282 QGEDP----YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 282 ~~~~~----~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
|.... +..+.++++.+++.. +|+-.|. +.++++.+..+++.....+...++|+||++.+.+...+.+|.+
T Consensus 161 g~~~~~~~~d~~~aa~~la~~~~~-~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~---- 234 (279)
T 3rpz_A 161 GVPVNELQKKRAEYAKEWAAQLQT-VIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED---- 234 (279)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTS-EEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS----
T ss_pred CCCccchHHHHHHHHHHHHHHcCe-EEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC----
Confidence 97642 233455666654333 4444454 4556665545555555556778999999876665566679999
Q ss_pred hHHHHHHHHHHHH----HHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 358 EDQLRDALRFANA----CGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 358 ~~~l~~al~~A~a----~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+.+|+..|.. ++-....+.|.+ + ....||.+.+.+
T Consensus 235 ---~~~A~~~a~~lh~~Ag~~a~~~~g~~-~-~~a~dl~~~lp~ 273 (279)
T 3rpz_A 235 ---PKHAVLNAVYLHGACAELWTDEHSAH-T-LLAHELSDILPR 273 (279)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHSCTT-S-CCHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHHH
Confidence 8999998864 444445555644 3 356777776643
|
| >3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=8.7e-07 Score=89.85 Aligned_cols=174 Identities=11% Similarity=0.007 Sum_probs=107.9
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHH-HHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAK-AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~-~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.++.+|.+.++.- +..+ . ...++++ .+++.++++++|+..... . . .+.+ +..+..++++||..|+..
T Consensus 316 ~~~~~~davviGpG-lg~~--~-~~~~~~~~~l~~~~~pvVlDadgl~~-l-~----~~ll-~~~~~~~vlTPN~~E~~~ 384 (502)
T 3rss_A 316 ELSKDVDVVAIGPG-LGNN--E-HVREFVNEFLKTLEKPAVIDADAINV-L-D----TSVL-KERKSPAVLTPHPGEMAR 384 (502)
T ss_dssp HHHTTCSEEEECTT-CCCS--H-HHHHHHHHHHHHCCSCEEECHHHHHT-C-C----HHHH-HHCSSCEEECCCHHHHHH
T ss_pred HHhccCCEEEEeCC-CCCC--H-HHHHHHHHHHHhcCCCEEEeCcccch-h-c----HHHH-hccCCCEEEeCCHHHHHH
Confidence 46788999988742 2222 1 1222222 456679999999842100 0 0 1111 123457999999999999
Q ss_pred ccCCCCCc---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcccc
Q 015777 280 LTQGEDPY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQ 356 (400)
Q Consensus 280 l~~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~ 356 (400)
|+|....+ +.+.++++.+++.. +|+..|. +.++++.+..+ +.....+..+++|+||+|.|.+.+.+.+|.+
T Consensus 385 L~g~~~~~~~~d~~aa~~la~~~~~-~VvlKG~-~~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~--- 458 (502)
T 3rss_A 385 LVKKTVGDVKYNYELAEEFAKENDC-VLVLKSA-TTIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLS--- 458 (502)
T ss_dssp HHTCCHHHHTTCHHHHHHHHHHHTS-EEEECSS-SEEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCC---
T ss_pred HhCCCccchHHHHHHHHHHHHHcCC-EEEEeCC-CeEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCC---
Confidence 99975321 14556666655322 5555565 45556665444 4444556789999999988887777889999
Q ss_pred chHHHHHHHHHHHHHHHHHhccc--CCCCCCCCHHHHHHHHhC
Q 015777 357 KEDQLRDALRFANACGALTVMER--GAIPALPTREAVLNAIHA 397 (400)
Q Consensus 357 ~~~~l~~al~~A~a~Aa~~v~~~--G~~~~~p~~~~l~~~l~~ 397 (400)
+.+|+.+|+..-+..-... |.. + .+..||.+.+.+
T Consensus 459 ----~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~lp~ 495 (502)
T 3rss_A 459 ----PLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLIPE 495 (502)
T ss_dssp ----HHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHHH
Confidence 9999999977666542221 432 2 356777766543
|
| >3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A | Back alignment and structure |
|---|
Probab=98.56 E-value=2.1e-06 Score=85.57 Aligned_cols=78 Identities=12% Similarity=0.007 Sum_probs=58.4
Q ss_pred hcCCccEEEEccccccCc-----hh----HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc
Q 015777 202 LITKAKIFHYGSISLITE-----PC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI 272 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~-----~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~ 272 (400)
..+.+|.++++|+.++.+ .. .+...+.++..+..++++.++... +.+.+..+..+..+++++|.+-+
T Consensus 233 ~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As----~~~~~l~~~i~~~i~p~vDSlGm 308 (474)
T 3drw_A 233 IGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFAS----VQDRKLRKKIITNILPFVDSVGI 308 (474)
T ss_dssp HHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCC----CSCHHHHHHHHHHTGGGSSEEEE
T ss_pred hhcCCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCc----cccHHHHHHHHHHhccccccccc
Confidence 334689999999987655 11 223335556667889999999864 34566666777789999999999
Q ss_pred CHhHHhcccCC
Q 015777 273 SEEEISFLTQG 283 (400)
Q Consensus 273 N~~E~~~l~~~ 283 (400)
||.|+..+.+.
T Consensus 309 NEqELa~l~~~ 319 (474)
T 3drw_A 309 DEAEIAQILSV 319 (474)
T ss_dssp EHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999988764
|
| >3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-05 Score=81.95 Aligned_cols=164 Identities=15% Similarity=-0.030 Sum_probs=103.9
Q ss_pred ccCCccccchhhcCC-ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cC
Q 015777 191 MLLQEAELDLSLITK-AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TA 267 (400)
Q Consensus 191 ~~l~~~~l~~~~i~~-~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~ 267 (400)
|...++++. ++.+. ++.++++.-.+ .+ .+.+..+.+.+++.++|+++||..... .. .-.+...++++ ..
T Consensus 292 M~~~~~E~~-e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~~-~r~~~~~~Ll~~~~~ 363 (540)
T 3nl6_A 292 MSEIQSEVN-DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---TE-TRLLLNNKLLTFGQF 363 (540)
T ss_dssp CCCCHHHHH-HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT---SH-HHHHHHHHHTTSCCC
T ss_pred hcCCHHHHH-HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc---cc-ccHHHHHHHHhhCCC
Confidence 333444443 56666 88887754322 22 677888888899999999999965322 12 11244455666 79
Q ss_pred cEEEcCHhHHhcccCCCC--------------CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeC----------------
Q 015777 268 DIIKISEEEISFLTQGED--------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK---------------- 317 (400)
Q Consensus 268 dvl~~N~~E~~~l~~~~~--------------~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~---------------- 317 (400)
+||++|..|+..|+|... .+..+.++++.++....|++| |+. -++.++
T Consensus 364 ~vItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~ 441 (540)
T 3nl6_A 364 SCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTS 441 (540)
T ss_dssp SEEEECHHHHHHHTTC--------------CCHHHHHHHHHHHHHTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCC
T ss_pred eEECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEc-CCC-eEEECCCccccccccccccccc
Confidence 999999999999998652 111234566666555556665 433 234444
Q ss_pred ---CceEEEcccc-ccccCCCCchHHHHHHHHHHHHcCC---ccccchHHHHHHHHHHHHH
Q 015777 318 ---DFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDF---SLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 318 ---~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~---~~~~~~~~l~~al~~A~a~ 371 (400)
+..+.++.-. .-.-.++|.||++.+.+.+.+..+. + +.+|+..|...
T Consensus 442 ~~~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-------~~~Aa~~a~~~ 495 (540)
T 3nl6_A 442 VEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGN-------LFHAVVAGVML 495 (540)
T ss_dssp TTSSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-------HHHHHHHHHHH
T ss_pred cCCccEEEECCCChhhccCccCchHHHHHHHHHHHhcCcCCCC-------HHHHHHHHHHH
Confidence 3445555433 2233479999999998888888876 5 66776666543
|
| >1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.32 E-value=2.6e-06 Score=84.96 Aligned_cols=163 Identities=9% Similarity=0.143 Sum_probs=97.3
Q ss_pred cCCChHHHHHHHHHHcCCCcee--eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCce--e------
Q 015777 91 APGGAPANVAVGIARLGGSSAF--IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMR--F------ 160 (400)
Q Consensus 91 ~~GG~~~N~A~~larLG~~~~~--i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~--~------ 160 (400)
+.||.+..+|..++++|.++.+ ++. +|+ .+.+.|.+.+|..-.+. .
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~-------------------l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~ 164 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQ-------------------LSR-----LQANLFLDGPIYVPTLENGEVKLIHP 164 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSC-------------------CCH-----HHHTTSCSSSEEEEEEETTEEEEECG
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCC-------------------CCH-----HHHHhcCCCCeEeecccCCccccccc
Confidence 8999999999999999999988 666 665 23333332223220000 0
Q ss_pred ---cCCCCceEEEEEEcCCCC----------eeEEEecCCCccccCCccccch---hhcCCccEEEEccccccCchh---
Q 015777 161 ---DPGARTALAFVTLRSDGE----------REFMFYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITEPC--- 221 (400)
Q Consensus 161 ---~~~~~t~~~~i~~~~~g~----------r~~~~~~~~~~~~~l~~~~l~~---~~i~~~~~v~~~~~~~~~~~~--- 221 (400)
....+....+|+-.+.|+ ++|+...+.........+++.. +...++|.++++|+.++.+.+
T Consensus 165 ~e~~~~~~~~iH~I~Ef~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~ 244 (455)
T 1ua4_A 165 KEFSGDEENCIHYIYEFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKE 244 (455)
T ss_dssp GGCSCCCCCCEEEEEEECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHH
T ss_pred hhhccCCCCCceEEEEcCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHH
Confidence 012344555555445554 2343332222111112333331 233459999999998765532
Q ss_pred -HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccC
Q 015777 222 -KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282 (400)
Q Consensus 222 -~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~ 282 (400)
.+...+.++..+..++++.++.... .+.+.....+ .+++++|.+-+|+.|+..+.+
T Consensus 245 ~~~~~l~~i~~L~~~~~~iH~ElAs~----~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 245 PFEIVKSNLEVLNEREIPVHLEFAFT----PDEKVREEIL-NVLGMFYSVGLNEVELASIME 301 (455)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEeCCc----cCHHHHHHHH-hhhccCcccccCHHHHHHHHH
Confidence 2222222223467789999999653 3455556666 899999999999999987754
|
| >3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.4e-05 Score=74.18 Aligned_cols=154 Identities=17% Similarity=0.015 Sum_probs=89.8
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhHHhc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISF 279 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E~~~ 279 (400)
++.+.++.+++..- ...+...+.+....+.+++.++|+++||..... +..+ .+..++++ .++++|++|..|+..
T Consensus 52 e~~~~a~al~iNiG-tl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~~R-~~~~~~ll~~~~~vIrgN~sEi~~ 126 (265)
T 3hpd_A 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKFR-TRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHHH-HHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEECC-CCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cHHH-HHHHHHHHhcCCcEEcCCHHHHHH
Confidence 45556666665422 223334556677788899999999999964322 1111 12233333 378999999999999
Q ss_pred ccCCCCC---------c---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 280 LTQGEDP---------Y---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 280 l~~~~~~---------~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
|.|.... . ..+.++.+.++.-..|++| |+. -++.++++.+.++.-..-.-..+|.||+..+.+.+.
T Consensus 127 L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlk-G~~-d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~ 204 (265)
T 3hpd_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAV-DYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSS-EEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhcccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEe-CCC-eEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHH
Confidence 9864311 1 1234455655544455555 543 445555556655543333334589999976655555
Q ss_pred HHcCCccccchHHHHHHHHHHH
Q 015777 348 LSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 348 l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++ + +.+|+..|.
T Consensus 205 lA~~-~-------~~~Aa~~a~ 218 (265)
T 3hpd_A 205 VAVT-E-------PLKATTSAL 218 (265)
T ss_dssp HTTS-C-------HHHHHHHHH
T ss_pred HhcC-C-------hHHHHHHHH
Confidence 5555 4 445555554
|
| >1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00011 Score=73.19 Aligned_cols=161 Identities=7% Similarity=0.098 Sum_probs=93.5
Q ss_pred cCCChHHHHHHHHHHcCCCcee--eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCC-----Ccee---
Q 015777 91 APGGAPANVAVGIARLGGSSAF--IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGA-----GMRF--- 160 (400)
Q Consensus 91 ~~GG~~~N~A~~larLG~~~~~--i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~-----~v~~--- 160 (400)
+.||.+.-+|..|+++|.++.+ ++. +|+ ...+.|...+|..- .+..
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~-------------------~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~ 172 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQ-------------------NPK-----LQAELFVDGPIYVPVFEGNKLKLVHP 172 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSC-------------------CCH-----HHHTTSCSSSEEEEEECSSCEEEECG
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCC-------------------CCH-----HHHHhcCCCCeeeeeccCCceecccc
Confidence 9999999999999999999988 554 443 23333321222110 0000
Q ss_pred ---cCCCCceEEEEEEcCCCC----------eeEE-EecCCCccccCCccccch---hhcCCccEEEEccccccCc----
Q 015777 161 ---DPGARTALAFVTLRSDGE----------REFM-FYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITE---- 219 (400)
Q Consensus 161 ---~~~~~t~~~~i~~~~~g~----------r~~~-~~~~~~~~~~l~~~~l~~---~~i~~~~~v~~~~~~~~~~---- 219 (400)
..+.+.-..+|+-.+.|+ ++|+ ..+..+..... .+++.. +.....|.++++|+.++.+
T Consensus 173 ~ea~~~~~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~ 251 (467)
T 1gc5_A 173 KDAIAEEEELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYM-RREFREGFEEITRNVELAIISGLQVLKEYYPD 251 (467)
T ss_dssp GGSCCSCCCCEEEEEEECSSCEETTEECSSCEEEEEECCSSTTTTCC-CHHHHHSHHHHHTTCSEEEECCGGGCCSBCTT
T ss_pred hhhccCCCCcceEEEEcCCCCeecceeccCCceEEEecCCCCccccc-cHHHHHHHHhhccCCCEEEEechhcccCccCC
Confidence 001233334444333333 2343 33322322222 233321 3345699999999977555
Q ss_pred -hhH-HHH---HHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 220 -PCK-SAH---IAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 220 -~~~-~~~---~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
... +.+ .+.++.....++++.++... +.+.+-....+ .+++++|.+-+||.|+..+.
T Consensus 252 g~~~~~~l~~~~~~l~~l~~~~~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 252 GTTYKDVLDRVESHLNILNRYNVKSHFEFAY----TANRRVREALV-ELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp SCBHHHHHHHHHHHHHHHHHTTCEEEEECCC----CCCHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhhcCCCCeEEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 212 222 23333336678999999865 34566666777 89999999999999998543
|
| >1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=97.89 E-value=7.2e-05 Score=74.38 Aligned_cols=75 Identities=11% Similarity=0.104 Sum_probs=54.0
Q ss_pred hhcCCccEEEEccccccCchh----HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhH
Q 015777 201 SLITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEE 276 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E 276 (400)
+...+.|.++++|+.++.+.. .+...+.++..+..++++.++... +.+.+-.+..+ .+++++|.+-+||.|
T Consensus 224 e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqE 298 (457)
T 1l2l_A 224 EIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAF----TPDEVVRLEIV-KLLKHFYSVGLNEVE 298 (457)
T ss_dssp HHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCC----CSSHHHHHHHH-HHGGGCSEEEECHHH
T ss_pred hhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECC----cccHHHHHHHH-hhccccccCccCHHH
Confidence 344569999999997766511 122223333447789999999864 34566666777 899999999999999
Q ss_pred Hhcc
Q 015777 277 ISFL 280 (400)
Q Consensus 277 ~~~l 280 (400)
+..+
T Consensus 299 La~l 302 (457)
T 1l2l_A 299 LASV 302 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
|
| >3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.002 Score=64.67 Aligned_cols=166 Identities=19% Similarity=0.123 Sum_probs=99.0
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccC
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~ 282 (400)
.+++|.+.++.- +..+.. + +.++++ . + ++++|... ++ ...+.+.++...|++||..|+..|++
T Consensus 290 ~~~~~a~~iGPG-lG~~~~-~-l~~~l~---~-~-p~VlDADa---L~------~~~~~~~~~~~~VlTPh~~E~~rL~g 352 (475)
T 3k5w_A 290 PNLLSAFALGMG-LENIPK-D-FNRWLE---L-A-PCVLDAGV---FY------HKEILQALEKEAVLTPHPKEFLSLLN 352 (475)
T ss_dssp CSSCSEEEECTT-CSSCCT-T-HHHHHH---H-S-CEEEEGGG---GG------SGGGGTTTTSSEEEECCHHHHHHHHH
T ss_pred ccCCCEEEEcCC-CCCCHH-H-HHHHHh---c-C-CEEEECcc---cC------CchhhhccCCCEEECCCHHHHHHHhC
Confidence 367888888752 222222 2 344442 2 4 99999741 10 01122334566899999999999987
Q ss_pred C-----CCCc----HHHHHHHHHhCC-CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 283 G-----EDPY----DDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 283 ~-----~~~~----~~~~~~~l~~~g-~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
. +..+ ..+.++++.++. ...|++| |.. .+++++++.+..+ .-..-..+.|.||++.+.+...+.+|.
T Consensus 353 ~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlK-G~~-~vI~~~~~~~~~~-~g~~~mat~GtGdvLsg~Iaa~lA~g~ 429 (475)
T 3k5w_A 353 LVGINISMLELLDNKLEIARDFSQKYPKVVLLLK-GAN-TLIAHQGQVFINI-LGSVALAKAGSGDVLAGLILSLLSQNY 429 (475)
T ss_dssp HTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEEC-SSS-EEEEETTEEEEEC-CCCGGGCSTTHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEe-CCC-CEEECCCEEEEEC-CCCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 6 3221 124456666655 4455555 443 3444544444333 223345679999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhccc-CCCCCCCCHHHHHHHHhC
Q 015777 353 SLLQKEDQLRDALRFANACGALTVMER-GAIPALPTREAVLNAIHA 397 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~~~-G~~~~~p~~~~l~~~l~~ 397 (400)
+ +.+|+..|...-+..-... +. .+ ....||.+.+.+
T Consensus 430 ~-------~~~Aa~~a~~lhg~ag~~a~~~-~~-~~a~dl~~~l~~ 466 (475)
T 3k5w_A 430 T-------PLDAAINASLAHALASLEFKNN-YA-LTPLDLIEKIKQ 466 (475)
T ss_dssp C-------HHHHHHHHHHHHHHGGGGCSST-TC-CCHHHHHHHHHT
T ss_pred C-------HHHHHHHHHHHHHHHHHHhccC-CC-cCHHHHHHHhhh
Confidence 9 8888887765544443332 21 23 367788877654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 400 | ||||
| d1tyya_ | 304 | c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm | 2e-48 | |
| d2afba1 | 333 | c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase | 8e-45 | |
| d1v19a_ | 302 | c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther | 6e-43 | |
| d2dcna1 | 308 | c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 | 1e-41 | |
| d1rkda_ | 306 | c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: | 8e-38 | |
| d2fv7a1 | 308 | c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien | 4e-37 | |
| d1vm7a_ | 299 | c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax | 1e-35 | |
| d1vk4a_ | 288 | c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot | 3e-35 | |
| d2ajra1 | 319 | c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T | 2e-27 | |
| d2f02a1 | 313 | c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac | 3e-27 | |
| d2abqa1 | 306 | c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru | 2e-26 | |
| d1bx4a_ | 342 | c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien | 3e-25 | |
| d2absa1 | 350 | c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g | 4e-23 | |
| d1vi9a_ | 288 | c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col | 0.003 |
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Score = 164 bits (415), Expect = 2e-48
Identities = 102/333 (30%), Positives = 153/333 (45%), Gaps = 32/333 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
V G+ +D VP ++ K PGGA ANV V +ARLGG FIG
Sbjct: 3 VWVIGDASVDLVPEKQN-------SYLKCPGGASANVGVCVARLGGECGFIGC------- 48
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
+G D+ G L + ++N V+ +R D +A+ V L +DGER F
Sbjct: 49 ------------LGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFT 96
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242
+ +P AD + DL + + F++ SI L P + A + A+ ++AG + +D
Sbjct: 97 YLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFD 154
Query: 243 PNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKL 302
NLR +W + D+ E I A I K+S +E+ L+ D Y L
Sbjct: 155 VNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDAR--YYLRDLGCDT 212
Query: 303 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362
+++ G DG T + +V+ VD TGAGDAFV G+L LS L
Sbjct: 213 TIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCW--DHALLA 270
Query: 363 DALRFANACGALTVMERGAIPALPTREAVLNAI 395
+A+ ANACGA+ V +GA+ ALP + + +
Sbjct: 271 EAISNANACGAMAVTAKGAMTALPFPDQLNTFL 303
|
| >d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermotoga maritima, TM0067 [TaxId: 2336]
Score = 155 bits (393), Expect = 8e-45
Identities = 62/352 (17%), Positives = 113/352 (32%), Gaps = 52/352 (14%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
VV FGE+++ P + ++ +F GGA ANVA +A++G + F+ K
Sbjct: 6 VVTFGEIMLRLSPPDHK-RIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTK------- 57
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
+ + G A L++ V + S + +
Sbjct: 58 ------------LPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVV 105
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISL--ITEPCKSAHIAAAKAAKDAGVVLS 240
+ R SA + + D I + + S + + A K A + GV +S
Sbjct: 106 YDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVS 165
Query: 241 YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL 300
D N R + ++A++ ++ E D++ +EE+I + D KL
Sbjct: 166 CDLNYRAR-LWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAY 224
Query: 301 KLLL---------------------VTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDA 339
+ T + ++ VD GAGD+
Sbjct: 225 AKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDS 284
Query: 340 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 391
F ++ F + FA A L G + + E +
Sbjct: 285 FAGALIYGSLMGFD-------SQKKAEFAAAASCLKHTIPGDFV-VLSIEEI 328
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Score = 150 bits (378), Expect = 6e-43
Identities = 88/330 (26%), Positives = 122/330 (36%), Gaps = 37/330 (11%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
VV GE L+ VP G L + GGA NVAV +ARLG F+G+
Sbjct: 4 VVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGR------- 55
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
VG DE G M+ + L+ V+ R PG G+
Sbjct: 56 ------------VGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREY-LPLGQGRVF 102
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT-EPCKSAHIAAAKAAKDAGVVLSY 241
+YR SA L D + + H I+ ++ + A + AK GV +S
Sbjct: 103 YYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSL 162
Query: 242 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301
D N R LW + AR + D++ +SEEE L + +
Sbjct: 163 DVNYRQTLWSPEE-ARGFLERALPGVDLLFLSEEEAELLFGRVEEALR-------ALSAP 214
Query: 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361
+++ G G + VEAVD GAGDAF AG L+ +
Sbjct: 215 EVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPV------- 267
Query: 362 RDALRFANACGALTVMERGAIPALPTREAV 391
+ LR AN GA RG P RE +
Sbjct: 268 EERLRLANLLGASVAASRGDHEGAPYREDL 297
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Score = 147 bits (370), Expect = 1e-41
Identities = 86/335 (25%), Positives = 131/335 (39%), Gaps = 34/335 (10%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
++ GE+LI+F G L F+K G+ AN V + G I K
Sbjct: 3 LITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAK------- 54
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER--E 180
VG DEFGY + L+ V+ + M+ DP A T + F+ E
Sbjct: 55 ------------VGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSE 102
Query: 181 FMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLS 240
++YR SA L ++D + A + H I+L + A + S
Sbjct: 103 SIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAV---YKAFEIASNRS 159
Query: 241 YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL 300
+D N+RL LW + + RE + + + I++ + S + GE D A F
Sbjct: 160 FDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGESDPDKAAKA--FSDYA 217
Query: 301 KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQ 360
+++++ GP G Y G +V D TGAGDA LS F +
Sbjct: 218 EIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEM------ 271
Query: 361 LRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
AL +A L VM RG LPT + + +
Sbjct: 272 -EKALDYAIVASTLNVMIRGDQENLPTTKDIETFL 305
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Score = 136 bits (343), Expect = 8e-38
Identities = 75/340 (22%), Positives = 128/340 (37%), Gaps = 48/340 (14%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
+V G + D + + ++ A GG AN AV R G + AFI
Sbjct: 4 LVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIAC--- 60
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
G D G + L +N++ + G T +A + + +GE
Sbjct: 61 ----------------TGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGE 104
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 238
+ +A + L + +I + ++ + E + +AAAK A +
Sbjct: 105 NVIGIHAGANAAL-----SPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTI 159
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY---KL 295
++ +P L + DII +E E LT D+ L
Sbjct: 160 VALNPAPARELPDE----------LLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVL 209
Query: 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLL 355
++ +L+T G G RV G +V+AVD AGD F +++ L + L
Sbjct: 210 HEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPL- 268
Query: 356 QKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+A+RFA+A A+ V +GA P++P RE + +
Sbjct: 269 ------PEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFL 302
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 4e-37
Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 41/335 (12%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTL 118
VV G + D V S L F GG AN V ARLG ++ + K
Sbjct: 4 VVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCK--- 60
Query: 119 FCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE 178
VG D FG + LK+N+++ A T A + + ++G+
Sbjct: 61 ----------------VGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQ 104
Query: 179 REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 238
+ + + ++ ++I++AK+ + + A A+ +GV
Sbjct: 105 NIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLE-----ITPATSLEALTMARRSGVK 159
Query: 239 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298
++P + ++ + + E ++ LT G L
Sbjct: 160 TLFNPAPAIADL------DPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKR 213
Query: 299 NLKLLLVTEGPDGCRYYTK--DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQ 356
+++++T G +GC ++ + KV+AVD TGAGD+FV + L+
Sbjct: 214 GCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLA-----YY 268
Query: 357 KEDQLRDALRFANACGALTVMERGAIPALPTREAV 391
L D L +N A++V G + P ++ +
Sbjct: 269 PNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDL 303
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Score = 131 bits (328), Expect = 1e-35
Identities = 60/338 (17%), Positives = 112/338 (33%), Gaps = 51/338 (15%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSS-AFIGKTT 117
+ G ID V V + ++ PGG AN AV +A++G F+
Sbjct: 5 ISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTC-- 62
Query: 118 LFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDG 177
+G D++ +L + ++ + G P R F+ + G
Sbjct: 63 -----------------IGNDDYSDLLIENYEKLGITGYIRVSLPTGRA---FIEVDKTG 102
Query: 178 EREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 237
+ + + +A+ L++ +D + ++++ I + + A D
Sbjct: 103 QNRIIIFPGANAE--LKKELIDWNTLSESDILLLQNEIPFETTLECAKRFNGIVIFDP-- 158
Query: 238 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297
+ + ++ D I + + K
Sbjct: 159 --APAQGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLT-----------VEKAAEKFLE 205
Query: 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357
+K ++V G G K+ KV+AVD T AGD F LS +
Sbjct: 206 LGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNP--- 262
Query: 358 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395
+A+ F A A++V GA ++P RE V +
Sbjct: 263 ----EEAVIFGTAAAAISVTRLGAQSSIPAREEVEAFL 296
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Score = 129 bits (324), Expect = 3e-35
Identities = 45/324 (13%), Positives = 84/324 (25%), Gaps = 55/324 (16%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122
+ G + D V V G + A GG A+ + LG + I
Sbjct: 9 ITFIGHVSKD-VNVVDG-------KREIAYGGGVVMGAITSSLLGVKTKVIT-------- 52
Query: 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 182
K ++ L++N V ++ + SD +
Sbjct: 53 -----------KCTREDVSKF--SFLRDNGVEVVFLKSPRTTSIENRYG---SDPDTRES 96
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242
F + + + + + H + P + + LS D
Sbjct: 97 FLISAADPFTESDLAFI-----EGEAVHINPLWYGEFP-----EDLIPVLRRKVMFLSAD 146
Query: 243 PNLRLP---LWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299
+ + E + D+ K+ E LT D + + + F A
Sbjct: 147 AQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTNDLRESCRIIRSFGAK 206
Query: 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKED 359
+ TG GD A L + K+
Sbjct: 207 II----LATHASGVIVFDGNFYEASFRSWSLEGRTGRGDTCTAAFL------VGFVFKKM 256
Query: 360 QLRDALRFANACGALTVMERGAIP 383
+ A +FA A ++ + G +
Sbjct: 257 SIEKATKFAAAVTSVKMRHPGPLR 280
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Score = 108 bits (271), Expect = 2e-27
Identities = 44/333 (13%), Positives = 100/333 (30%), Gaps = 49/333 (14%)
Query: 71 IDFVPTVSGLSLAE------SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEH 124
+D + + + +PGG NV++ +++LG S G
Sbjct: 11 LDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATG---------- 60
Query: 125 VKVIILPCPKVGADEFGYMLADILKENNVN--GAGMRFDPGARTALAFVTLRSDGEREFM 182
VG G +L + L++ + + + R + + ++
Sbjct: 61 ---------FVG-GYMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAIN 110
Query: 183 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242
F DM + + S S+ + + A++ GV + +
Sbjct: 111 FPGPDVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVE 170
Query: 243 PNLRLPLWPSADKAREGILSIWETADIIKIS---EEEISFLTQGEDPYDDAVVYKLFHAN 299
+ E I E +++K + D + +
Sbjct: 171 QT---------PRLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEK 221
Query: 300 LKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKE 358
++ +V+ T++ +++ GAGDA+VAG++ ++
Sbjct: 222 SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVY------YFIKHG 275
Query: 359 DQLRDALRFANACGALTVMERGAIPALPTREAV 391
+ +F A + +P EA+
Sbjct: 276 ANFLEMAKFGFASALAATRRKEK--YMPDLEAI 306
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Score = 107 bits (268), Expect = 3e-27
Identities = 56/328 (17%), Positives = 100/328 (30%), Gaps = 38/328 (11%)
Query: 71 IDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKV 127
ID + L L + K PGG NV I LGG G
Sbjct: 11 IDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATG------------- 57
Query: 128 IILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNP 187
+G G +A+ LK+ N+ A R ++A + + E +
Sbjct: 58 ------VLG-GFHGAFIANELKKANIPQAFTSIKEETRDSIAIL--HEGNQTEILEAGPT 108
Query: 188 SADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL 247
+ + + + K S SL + + A V + D +
Sbjct: 109 VSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS 168
Query: 248 PLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTE 307
+ ++ + ++ K A ++ ++++
Sbjct: 169 LRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTAL----TKPMFAGIEWIVISL 224
Query: 308 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367
G DG D RV+ ++A + G+GDA +AG+ L+ D + L++
Sbjct: 225 GKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKW 277
Query: 368 ANACGALTVMERGAIPALPTREAVLNAI 395
A G ER E V +
Sbjct: 278 GMAAGMANAQERMT--GHVDVENVKKHL 303
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Score = 105 bits (263), Expect = 2e-26
Identities = 63/324 (19%), Positives = 115/324 (35%), Gaps = 46/324 (14%)
Query: 71 IDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKV 127
ID++ V S +K PGG NV+ + RLG + +G
Sbjct: 11 IDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALG------------- 57
Query: 128 IILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNP 187
+G G + + L++ + + + + R V ++ E E
Sbjct: 58 ------FLGGF-TGAYVRNALEKEEIGLSFIEVEGDTRI---NVKIKGKQETELNGTAPL 107
Query: 188 SADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL 247
+Q L+ + K + + S+ ++ + + + AK+ G ++ D +
Sbjct: 108 IKKEHVQALLEQLTELEKGDVLVL-AGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEA 166
Query: 248 PLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTE 307
A K + E ++++ V +L ++ +LV+
Sbjct: 167 LHEVLAAKPSFIKPNHHELSELVSK--------PIASIEDAIPHVQRLIGEGIESILVSF 218
Query: 308 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367
DG + + + V E ++ GAGD+ VAG L+ L S L DA+ F
Sbjct: 219 AGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPF 271
Query: 368 ANACGALTVMERGAIPALPTREAV 391
A A G+ T G TRE V
Sbjct: 272 AVAAGSATAFSDG----FCTREEV 291
|
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (256), Expect = 3e-25
Identities = 53/364 (14%), Positives = 106/364 (29%), Gaps = 64/364 (17%)
Query: 61 PLVVCFGEMLIDFVPTVS------------------------GLSLAESPAFKKAPGGAP 96
++ G L+D V L + + GG+
Sbjct: 4 NILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGST 63
Query: 97 ANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGA 156
N + T F G D+FG +L E +V+
Sbjct: 64 QNSIKVAQWMI--QQPHKAATFFGCI-------------GIDKFGEILKRKAAEAHVDAH 108
Query: 157 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216
+ + D + + +L+ + + K
Sbjct: 109 YYEQNEQPTGT-CAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGF 167
Query: 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEE 276
+ + A A + + + + + + +E ++ + DI+ +E E
Sbjct: 168 FLTVSPESVLKVAHHASENNRIFTLNLSA----PFISQFYKESLMKVMPYVDILFGNETE 223
Query: 277 ISFLTQGEDPYDD---------AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL- 326
+ + + + K+ ++++ T+G D T+ L
Sbjct: 224 AATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLD 283
Query: 327 --KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA-IP 383
+ E +D GAGDAFV G LSQL +D L + +R + ++ + G P
Sbjct: 284 QDQKEIIDTNGAGDAFVGGFLSQLVSDKP-------LTECIRAGHYAASIIIRRTGCTFP 336
Query: 384 ALPT 387
P
Sbjct: 337 EKPD 340
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Score = 97.2 bits (240), Expect = 4e-23
Identities = 58/372 (15%), Positives = 106/372 (28%), Gaps = 85/372 (22%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAE-----------------------SPAFKKAPGGAPANV 99
V G ++D V V L E PGG+ N
Sbjct: 6 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNS 65
Query: 100 AVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMR 159
+ +L G G D G +L ++ + +
Sbjct: 66 VRVVQKLLRKP---GSAGYMGAI-------------GDDPRGQVLKELCDKEGLA-TRFM 108
Query: 160 FDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219
PG T + V + + L ++ + Y + +T
Sbjct: 109 VAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPEDWTTF----ASGALIFYATAYTLTA 164
Query: 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 279
K+A A A + + + + + ++ + S+ +I+ +EEE +
Sbjct: 165 TPKNALEVAGYAHGIPNAIFTLNLSA----PFCVELYKDAMQSLLLHTNILFGNEEEFAH 220
Query: 280 LTQGEDPYDDA----------------------VVYKLFHANLKLLLVTEGPDGCRYYTK 317
L + + + + KL+++T G + +
Sbjct: 221 LAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQ 280
Query: 318 DFSGRVQGLKV--------EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369
G V +V + VD GAGDAFV G L LS + ++ + N
Sbjct: 281 TADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKT-------VKQCIMCGN 333
Query: 370 ACGALTVMERGA 381
AC + G
Sbjct: 334 ACAQDVIQHVGF 345
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Score = 37.1 bits (85), Expect = 0.003
Identities = 20/116 (17%), Positives = 35/116 (30%), Gaps = 20/116 (17%)
Query: 268 DIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDG--------CRYYT 316
DII + E+ L + + V +L +++LV T
Sbjct: 141 DIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVT 200
Query: 317 KD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 370
D + + G GD +L +L + L++AL A
Sbjct: 201 ADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGAT-------LQEALEHVTA 249
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 400 | |||
| d1v19a_ | 302 | 2-keto-3-deoxygluconate kinase {Thermus thermophil | 100.0 | |
| d1tyya_ | 304 | Aminoimidazole riboside kinase {Salmonella typhimu | 100.0 | |
| d2afba1 | 333 | 2-keto-3-deoxygluconate kinase {Thermotoga maritim | 100.0 | |
| d2dcna1 | 308 | Hypothetical fructokinase ST2478 {Sulfolobus tokod | 100.0 | |
| d1vm7a_ | 299 | Ribokinase {Thermotoga maritima [TaxId: 2336]} | 100.0 | |
| d1rkda_ | 306 | Ribokinase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2fv7a1 | 308 | Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2f02a1 | 313 | Tagatose-6-phosphate kinase LacC {Enterococcus fae | 100.0 | |
| d2abqa1 | 306 | Fructose 1-phosphate kinase FruB {Bacillus halodur | 100.0 | |
| d2ajra1 | 319 | Putative sugar kinase TM0828 {Thermotoga maritima | 100.0 | |
| d1bx4a_ | 342 | Adenosine kinase {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d2absa1 | 350 | Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | 100.0 | |
| d1vk4a_ | 288 | Hypothetical protein TM0415 {Thermotoga maritima [ | 99.97 | |
| d1vi9a_ | 288 | Pyridoxamine kinase {Escherichia coli [TaxId: 562] | 99.62 | |
| d1ub0a_ | 258 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.42 | |
| d1lhpa_ | 309 | Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] | 99.34 | |
| d1jxha_ | 266 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.33 | |
| d1ekqa_ | 269 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba | 98.7 | |
| d1v8aa_ | 264 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar | 98.42 | |
| d1kyha_ | 275 | Hypothetical protein YxkO {Bacillus subtilis [TaxI | 98.29 | |
| d1u2xa_ | 450 | ADP-specific phosphofructokinase {Pyrococcus horik | 98.08 | |
| d1gc5a_ | 467 | ADP-dependent glucokinase {Archaeon Thermococcus l | 97.95 | |
| d1ua4a_ | 454 | ADP-dependent glucokinase {Archaeon Pyrococcus fur | 97.85 | |
| d1l2la_ | 451 | ADP-dependent glucokinase {Archaeon Thermococcus l | 97.79 | |
| d2ax3a1 | 278 | Hypothetical protein TM0922, C-terminal domain {Th | 97.45 |
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.7e-45 Score=347.08 Aligned_cols=301 Identities=30% Similarity=0.431 Sum_probs=259.7
Q ss_pred CCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
|++|+|||++++|++...++ +..+...+...+||+++|+|.+|++||.+|.++|. +|+|.
T Consensus 1 ~~~i~viG~~~vD~~~~~~~-~~~~~~~~~~~~GG~~~Nva~~l~~lg~~v~~~~~-------------------iG~D~ 60 (302)
T d1v19a_ 1 MLEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGR-------------------VGEDE 60 (302)
T ss_dssp CCSEEEESCCEEEEEESSSS-CGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EESSH
T ss_pred CCeEEEECcceEEEecCCCC-ceeecceEEEecCcHHHHHHHHHHHcCCCEEEEEE-------------------EcCCc
Confidence 47899999999999986554 33356667889999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc-cC
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-IT 218 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~-~~ 218 (400)
+|+++++.|+++||++.++...+. +++.+++.+..+|++++...........++.++.....++++++++...+.. ..
T Consensus 61 ~g~~i~~~l~~~gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 139 (302)
T d1v19a_ 61 LGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALS 139 (302)
T ss_dssp HHHHHHHHHHHHTCBCTTEEEESS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETHHHHHC
T ss_pred ccccchhhhhhcccccchhccccc-cccccchhhccccccccccccccccchhhccccccHHHHhcccEEeeeccccccc
Confidence 999999999999999999877665 6777788888899999888766677767777777778899999999877654 23
Q ss_pred chhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhC
Q 015777 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~ 298 (400)
+...+....+++..++.++.+.+|++.+...+. .....+.+.+.++.+|++++|++|++.+.+... +.+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~~-------~~~~~~ 211 (302)
T d1v19a_ 140 PEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRVE-------EALRAL 211 (302)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSTT-------HHHHHT
T ss_pred hhHHHHHHHHHHHHHhcCCccccccchhhhccc-hhhhHHHHHhhhhhccchhhhhhhhhhhhhhhh-------hhhhhc
Confidence 344567778899999999999999988766553 444556677789999999999999987766543 245567
Q ss_pred CCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 299 NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 299 g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+.+.++||+|++|++++.+++.+++|++++++||||||||+|+|||++++++|++ +++|+++|+++|++++++
T Consensus 212 ~~~~viit~G~~G~~~~~~~~~~~~p~~~v~vvDttGAGDaf~a~~~~~~~~g~~-------~~~a~~~a~~~Aa~~v~~ 284 (302)
T d1v19a_ 212 SAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAAS 284 (302)
T ss_dssp CCSEEEEECTTSCEEEEETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTS
T ss_pred cceEEEEecCCCCCccccccccccccccccccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHh
Q 015777 379 RGAIPALPTREAVLNAIH 396 (400)
Q Consensus 379 ~G~~~~~p~~~~l~~~l~ 396 (400)
.|+++++|+++||+++|+
T Consensus 285 ~G~~~~~p~~~~i~~~l~ 302 (302)
T d1v19a_ 285 RGDHEGAPYREDLEVLLK 302 (302)
T ss_dssp SSSSTTCCCHHHHHHCC-
T ss_pred CCCCCCCCCHHHHHHHhC
Confidence 999999999999999874
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=5.5e-44 Score=338.03 Aligned_cols=303 Identities=33% Similarity=0.526 Sum_probs=259.0
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+|||++++|++++.. ..+...+||++.|+|.+|++||.++.++|. +|+|.+|
T Consensus 2 ki~viG~~~~D~i~~~~-------~~~~~~~GG~~~NvA~~l~~lG~~v~~v~~-------------------vG~D~~g 55 (304)
T d1tyya_ 2 KVWVIGDASVDLVPEKQ-------NSYLKCPGGASANVGVCVARLGGECGFIGC-------------------LGDDDAG 55 (304)
T ss_dssp CEEEESCCEEEEEECSS-------SEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------ECSSHHH
T ss_pred eEEEECccEEEEecCCC-------CeEEEccCcHHHHHHHHHHHcCCCEEEEEE-------------------ecCChHH
Confidence 69999999999987643 345678999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchh
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~ 221 (400)
+++++.|++.||+++++...+..+++.+++..+.+|++++...+.......+.+++. ..+...+++++.+..+.....
T Consensus 56 ~~i~~~L~~~gi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 133 (304)
T d1tyya_ 56 RFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL--PPFRQYEWFYFSSIGLTDRPA 133 (304)
T ss_dssp HHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC--CCCCTTCEEEEEHHHHSSHHH
T ss_pred HHHHHhhhccccccccccccccccccceeeEeecccccccceecccccccccchhhh--hhhccceEEEEecccccccch
Confidence 999999999999999999999988999999989999999888766666655555444 445677889988777767777
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+...++++.+++.++++++|++.+..+|.....+...+.+.+...+....++.+.......+.. ..+.+.+.+.|++
T Consensus 134 ~~~~~~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~g~~ 211 (304)
T d1tyya_ 134 REACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDARYYLRDLGCD 211 (304)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSG--GGGSSTTGGGTCS
T ss_pred HHHHHHHHHHhhhcCceEeeccccccccccchhhhhhhhhhcccccccccccccccccccccchH--HHHHHHHHhcccc
Confidence 78888999999999999999999988888888888888888888999999999988777666543 2344566678999
Q ss_pred EEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCC
Q 015777 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381 (400)
Q Consensus 302 ~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~ 381 (400)
.++||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ .+++++++|+++|+++|+++|++.|+
T Consensus 212 ~vivt~G~~Ga~~~~~~~~~~~p~~~v~vvdt~GAGDaf~ag~~~~l~~g~~--~~~~~l~~al~~a~~~As~~v~~~G~ 289 (304)
T d1tyya_ 212 TTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANC--WDHALLAEAISNANACGAMAVTAKGA 289 (304)
T ss_dssp CEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSS--CCHHHHHHHHHHHHHHHHHGGGSSST
T ss_pred eeeeecccceeeeeccCCccccCcccccCCCCCCchHHHHHHHHHHHHhCCC--ccchHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999999999999999999987 35667899999999999999999999
Q ss_pred CCCCCCHHHHHHHHh
Q 015777 382 IPALPTREAVLNAIH 396 (400)
Q Consensus 382 ~~~~p~~~~l~~~l~ 396 (400)
.+++|+++||+++|.
T Consensus 290 ~~~~P~~~ev~~~l~ 304 (304)
T d1tyya_ 290 MTALPFPDQLNTFLS 304 (304)
T ss_dssp TTTCCCHHHHHHHHC
T ss_pred CCCCCCHHHHHHhhC
Confidence 999999999999974
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=2.9e-42 Score=327.38 Aligned_cols=303 Identities=28% Similarity=0.442 Sum_probs=247.7
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|++||++++|++...++ +..+...+..++||.+.|+|++|++||.++.++|. +|+|.+|
T Consensus 2 ki~~iG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~i~~-------------------vG~D~~g 61 (308)
T d2dcna1 2 KLITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAK-------------------VGDDEFG 61 (308)
T ss_dssp EEEEESCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------EESSHHH
T ss_pred EEEEECcceEEEecCCCC-ceeecceeEEecCcHHHHHHHHHHHCCCCEEEEEE-------------------eCCcccc
Confidence 799999999998876443 34466778889999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcC--CCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRS--DGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~--~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+++++.|+++||+++++++.++.+|+.+++..+. ++.....++...++......++...+.+..+++++.+.+.....
T Consensus 62 ~~i~~~L~~~gI~~~~i~~~~~~~t~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (308)
T d2dcna1 62 YNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAIS 141 (308)
T ss_dssp HHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSC
T ss_pred cccccccccccccccceeeeecccceEEEEEeccccccccccceeeecccccccccccccccccccceEEEeeccccccc
Confidence 9999999999999999999999999999887652 23333334445667777777777778899999999887754322
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
. ...+.+..+.+.+....+|.+.+...|.......+. .+.+. ..+.++.|++|...+.+.... +.+.+++.
T Consensus 142 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 214 (308)
T d2dcna1 142 S---TAKEAVYKAFEIASNRSFDTNIRLKLWSAEEAKREI-LKLLSKFHLKFLITDTDDSKIILGESDP---DKAAKAFS 214 (308)
T ss_dssp H---HHHHHHHHHHHHCSSEEEECCCCTTTSCHHHHHHHH-HHHHHHCCEEEEEEEHHHHHHHHSCCCH---HHHHHHHT
T ss_pred c---chhHHHHHHHhhccccccccceeccccchhhhhhhh-hhhccccccccccchhhhhhhhcchhhh---hhhhhhcc
Confidence 1 222333444555667788888877777543333333 33333 467888999999988876653 33446677
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.+++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++++
T Consensus 215 ~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDt~GAGDaf~ag~i~~l~~g~~-------~~~a~~~a~~~aa~~~~ 287 (308)
T d2dcna1 215 DYAEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVM 287 (308)
T ss_dssp TTEEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTT
T ss_pred cceeEEeeccccCceeeecCCcccccccceeeecCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHhCC
Q 015777 378 ERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+.|+.+++|+.++++++|+++
T Consensus 288 ~~G~~~~~p~~~~~~~~l~~~ 308 (308)
T d2dcna1 288 IRGDQENLPTTKDIETFLREM 308 (308)
T ss_dssp SSSSSTTCCCHHHHHHHHHHC
T ss_pred cCCCCcCCCCHHHHHHHHhhC
Confidence 999999999999999999875
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.5e-42 Score=325.68 Aligned_cols=291 Identities=23% Similarity=0.328 Sum_probs=248.1
Q ss_pred CCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCC-ceeeecccccccccceeeeccCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGS-SAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~-~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
|.|+|+|||++++|++..+++.|.+ ....+...+||++.|+|++|++||.+ |.++|.
T Consensus 1 ~~m~I~ViG~~~~D~~~~v~~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~i~~------------------ 62 (299)
T d1vm7a_ 1 MFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTC------------------ 62 (299)
T ss_dssp CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEE------------------
T ss_pred CeeEEEEeCeeeEEEEEEeCCCCCCCcEEeeeeEEEecCCHHHHHHHHHHHcCCCceEEEEe------------------
Confidence 4578999999999999999988775 34568889999999999999999997 789999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS 213 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~ 213 (400)
+|+|.+|+++++.|++.||++..+ .+.+|+.+.+.++.+|+|++..+ ......++.++++...+...+++++.+
T Consensus 63 -vG~D~~g~~~~~~l~~~gv~~~~~---~~~~t~~~~i~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~ 136 (299)
T d1vm7a_ 63 -IGNDDYSDLLIENYEKLGITGYIR---VSLPTGRAFIEVDKTGQNRIIIF--PGANAELKKELIDWNTLSESDILLLQN 136 (299)
T ss_dssp -ECSSHHHHHHHHHHHHTTEEEEEE---CSSCCCEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHTTCSEEEECS
T ss_pred -eeccchhHHHHHHHhhhccccccc---cccccceeEEEecCCCCeeEecc--CCcchhCCHhHhChhhcccccceeecc
Confidence 999999999999999999997643 34578999999999999998877 445566888888888888999999876
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC---CCcHHH
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDA 290 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~---~~~~~~ 290 (400)
... .....+...+.+.++++|+......+ ..+++.+|++++|++|+....+.. ..+.+.
T Consensus 137 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 198 (299)
T d1vm7a_ 137 EIP--------FETTLECAKRFNGIVIFDPAPAQGIN----------EEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK 198 (299)
T ss_dssp SSC--------HHHHHHHHHHCCSEEEECCCSCTTCC----------GGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHH
T ss_pred ccc--------chhhhHhhhhcCceEEEecCcchhhh----------HHHHhhcccccccHHHHHhhhccccccchhhhh
Confidence 532 11234456778899999987543322 235678999999999988765432 233455
Q ss_pred HHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHH
Q 015777 291 VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 291 ~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a 370 (400)
..+.+...+.+.+++|+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|++
T Consensus 199 ~~~~l~~~~~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~vvDttGAGDaf~Ag~i~~l~~g~~-------~~~al~~a~~ 271 (299)
T d1vm7a_ 199 AAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTA 271 (299)
T ss_dssp HHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHH
T ss_pred hhhhhhcCCCcEEEEeCCCCceEEEeccceEEEeeeeeeeECCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHH
Confidence 667888999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 371 CGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 371 ~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+++|++.|+.+++|+++||+++|+++
T Consensus 272 ~aa~~~~~~G~~~~~p~~~ei~~~lk~~ 299 (299)
T d1vm7a_ 272 AAAISVTRLGAQSSIPAREEVEAFLKNL 299 (299)
T ss_dssp HHHHHTTSSSSGGGCCCHHHHHHHHHTC
T ss_pred HHHHHhCcCCCCCCCCCHHHHHHHHhcC
Confidence 9999999999999999999999999875
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-41 Score=319.77 Aligned_cols=294 Identities=26% Similarity=0.349 Sum_probs=240.9
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+|||++++|.+..+++.|.+ ....+...+||++.|+|++|++||.++.++|. +|+
T Consensus 3 ~IlviG~~~~D~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~l~~lG~~v~~~~~-------------------vG~ 63 (306)
T d1rkda_ 3 SLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIAC-------------------TGD 63 (306)
T ss_dssp EEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEE-------------------EES
T ss_pred EEEEEceeeEEEEEeeCCCCCCCceEeeceEEEecCCHHHHHHHHHHHcCCCEEEEEE-------------------ECC
Confidence 6999999999999999988765 45667889999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEcccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSIS 215 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~~~~ 215 (400)
|.+|+.+++.|+++||++.++.......++.+...++.++++.....+.. ......+... .........+....
T Consensus 64 d~~~~~~~~~l~~~gi~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-- 139 (306)
T d1rkda_ 64 DSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGA--NAALSPALVEAQRERIANASALLMQL-- 139 (306)
T ss_dssp STTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGG--GGGCCHHHHHTTHHHHHHCSEEEECS--
T ss_pred ccccchhhhccccccccccccccccccccccceeeEeecCcceeeeeccc--hhhhhhhhhhhhHhhhhhheeeeecc--
Confidence 99999999999999999999999999999999999999999988776432 2222222211 11222222322221
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHH---HHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVV 292 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~---~~~ 292 (400)
....+............+.....++.... +.+.++++++|++++|.+|+..+++....... ...
T Consensus 140 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~ 206 (306)
T d1rkda_ 140 ---ESPLESVMAAAKIAHQNKTIVALNPAPAR----------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAA 206 (306)
T ss_dssp ---SSCHHHHHHHHHHHHHTTCEEEECCCSCC----------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHH
T ss_pred ---cchhhhhhhHHHHhhhcccccccCchhhh----------hhHHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHH
Confidence 12234555556667777888887775432 22345788999999999999999988765432 233
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
+.+...+.+.+++|+|++|+.++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|
T Consensus 207 ~~~~~~~~~~vivt~G~~g~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~Ag~l~~l~~g~~-------~~~a~~~a~~~a 279 (306)
T d1rkda_ 207 QVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAA 279 (306)
T ss_dssp HHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHH
T ss_pred HHHhhcCCcEEEEecCCceEEEeecCceEEeCCccCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 5566789999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 373 ALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 373 a~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|++.|+++++|+++||+++|++.
T Consensus 280 a~~v~~~G~~~~~p~~~ev~~~l~~~ 305 (306)
T d1rkda_ 280 AIAVTRKGAQPSVPWREEIDAFLDRQ 305 (306)
T ss_dssp HHHHTSSSSGGGCCCHHHHHHHHHTC
T ss_pred HHHhCCCCCCCCCCCHHHHHHHHHhc
Confidence 99999999999999999999999873
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-41 Score=318.58 Aligned_cols=293 Identities=26% Similarity=0.370 Sum_probs=237.3
Q ss_pred CcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+.|+|||++++|++..+++.|.+ .+..+...+||++.|+|++|++||.+|.++|. +|
T Consensus 2 ~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~lg~~v~~is~-------------------vG 62 (308)
T d2fv7a1 2 AAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCK-------------------VG 62 (308)
T ss_dssp CSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EE
T ss_pred CEEEEEChhheEeEeecCCCCCCCceEeeceEEEecCCHHHHHHHHHHHCCCCEEEEEE-------------------ec
Confidence 57999999999999999888765 23557889999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEEccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSI 214 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~~~~ 214 (400)
+|.+|+.+.+.|+++||+++++...+..++..+.+.++.+|++.+..+.. ....+....+.. .......+..+..
T Consensus 63 ~D~~g~~i~~~L~~~gi~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~- 139 (308)
T d2fv7a1 63 KDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAG--ANLLLNTEDLRAAANVISRAKVMVCQL- 139 (308)
T ss_dssp SSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECG--GGGGCCHHHHHHTHHHHHHCSEEEECS-
T ss_pred cccccccccchhcccccccccccccccccccceEEEEecCCceEEEeeec--chhhhchhhhhhhhhhcccceEEeecc-
Confidence 99999999999999999999999988889999999999999998887633 333333333221 2222233332221
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAV 291 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~ 291 (400)
...++......+.+++.+..+++|++++...|.. ......+++..+.+|.+........+. ...
T Consensus 140 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 206 (308)
T d2fv7a1 140 ----EITPATSLEALTMARRSGVKTLFNPAPAIADLDP---------QFYTLSDVFCCNESEAEILTGLTVGSAADAGEA 206 (308)
T ss_dssp ----SSCHHHHHHHHHHHHHTTCEEEECCCSCCTTCCT---------HHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHH
T ss_pred ----ccchHHHHHHHHHhhhcCceEEecccchhhhhhh---------hHHhhhhhhhhhHHHHHHhhhhhccchhhhhhH
Confidence 1235566778888999999999999876654432 234467888999888887766655443 334
Q ss_pred HHHHHhCCCcEEEEEecCCcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHHHH--HcCCccccchHHHHHHHHH
Q 015777 292 VYKLFHANLKLLLVTEGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQL--STDFSLLQKEDQLRDALRF 367 (400)
Q Consensus 292 ~~~l~~~g~~~vvvT~G~~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~l--~~g~~~~~~~~~l~~al~~ 367 (400)
...+++.+++.+++|+|++|+++++++ ..+++|+++++++|||||||+|+|||++++ .+|++ +++|+++
T Consensus 207 ~~~~~~~~~~~vivT~G~~G~~~~~~~~~~~~~~p~~~v~vvDttGAGDaF~ag~~~~l~~~~~~~-------~~~a~~~ 279 (308)
T d2fv7a1 207 ALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNR 279 (308)
T ss_dssp HHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHH
T ss_pred HHHHHhcCCCEEEEEecccceeeecccccceeecccccccccCCCChhHHHHHHHHHHHHHhCCCC-------HHHHHHH
Confidence 466778899999999999999999864 478999999999999999999999999977 58888 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 015777 368 ANACGALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 368 A~a~Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
|+++|+++|++.|+++++|+++||+.+|
T Consensus 280 a~~~aa~~v~~~G~~~~~p~~~ei~~~l 307 (308)
T d2fv7a1 280 SNFIAAVSVQAAGTQSSYPYKKDLPLTL 307 (308)
T ss_dssp HHHHHHHHHTSSSGGGGCCCGGGSCGGG
T ss_pred HHHHHHHHhCCCCCCCCCCCHHHHHHhh
Confidence 9999999999999999999999998765
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=1.2e-38 Score=304.81 Aligned_cols=290 Identities=22% Similarity=0.220 Sum_probs=230.7
Q ss_pred EEEEc-cceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 63 VVCFG-EMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 63 v~viG-~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|++++ +.++|++..+++.... ........+||++.|+|++|++||.++.++|. +|+|
T Consensus 2 ~~~~~~np~vD~~~~vd~~~~g~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~-------------------vGdd 62 (313)
T d2f02a1 2 IVTVTMNPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGV-------------------LGGF 62 (313)
T ss_dssp EEEEESSCEEEEEEECSCCCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEE-------------------EEHH
T ss_pred EEEEeCChHHcEEEEeCCccCCCEEEeCeeeecCCCHHHHHHHHHHHCCCCEEEEEE-------------------ecCc
Confidence 45555 3359999999887432 35678889999999999999999999999999 9965
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEEEEc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYG 212 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v~~~ 212 (400)
.|+.+.+.|+++||+++++...++ |+.++++++.++++.+. ..+ ..++.++++ .+.+..+|+++++
T Consensus 63 -~~~~i~~~l~~~gi~~~~i~~~~~--t~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~l~~~~~~~~~~~~~v~~~ 134 (313)
T d2f02a1 63 -HGAFIANELKKANIPQAFTSIKEE--TRDSIAILHEGNQTEIL-EAG----PTVSPEEISNFLENFDQLIKQAEIVTIS 134 (313)
T ss_dssp -HHHHHHHHHHHTTCCBCCEEESSC--CEEEEEEEETTEEEEEE-ECC----CBCCHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred -cHHHHHHHHHhhccCceEEEeecC--CceEEEEEeCCCceEEe-ecc----ccCCHHHHHHHHHHhhhhhcccceEEEe
Confidence 789999999999999999877654 55566666655544443 322 224444333 3578899999998
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc--H--
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY--D-- 288 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~--~-- 288 (400)
+... .....+.+.++++.+++.++++++|+.. ..++..+ +....+|++++|+.|+..|++....+ .
T Consensus 135 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~ 204 (313)
T d2f02a1 135 GSLA-KGLPSDFYQELVQKAHAQEVKVLLDTSG--------DSLRQVL-QGPWKPYLIKPNLEELEGLLGQDFSENPLAA 204 (313)
T ss_dssp SCCC-BTSCTTHHHHHHHHHHHTTCEEEEECCT--------HHHHHHH-HSSCCCSEECCBHHHHHHHHTCCCCSSCHHH
T ss_pred cccc-cccCHHHHHHHHHHHHhcCCceeecchH--------HHHHHHh-hhcccceEEEehhhhHHHhhccccccchhhH
Confidence 7532 2233467778899999999999999852 2333333 34568999999999999999875432 1
Q ss_pred -HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHH
Q 015777 289 -DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367 (400)
Q Consensus 289 -~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~ 367 (400)
.+.++++...|++.++||+|++|++++.+++.+++++++++++|||||||+|+|||+++|++|++ +++|+++
T Consensus 205 ~~~~~~~~~~~g~~~vivT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGD~f~ag~i~~l~~g~~-------~~~al~~ 277 (313)
T d2f02a1 205 VQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKW 277 (313)
T ss_dssp HHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHH
T ss_pred HHHHHHHHHhcCCceeEEecccceEEEEeCCceEecccccCCCCCCcCHHHHHHHHHHHHHHcCCC-------HHHHHHH
Confidence 22334556779999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 368 ANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 368 A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|+++|++++++.|+ ..|+.+++++++.++
T Consensus 278 A~a~aa~~~~~~g~--~~~~~e~~~~~~~~~ 306 (313)
T d2f02a1 278 GMAAGMANAQERMT--GHVDVENVKKHLMNI 306 (313)
T ss_dssp HHHHHHHHHHSSSS--SCCCHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCC--CCCCHHHHHHHHhcC
Confidence 99999999999996 569999999999864
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=8.3e-39 Score=304.61 Aligned_cols=285 Identities=21% Similarity=0.234 Sum_probs=228.2
Q ss_pred EEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 63 VVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 63 v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
+.|-.+.++|++..+++++.. +.......+||++.|+|++|++||.++.++|. +|+|
T Consensus 3 ~~~~~np~iD~~~~v~~~~~g~~~~~~~~~~~~GG~~~N~A~~l~~lG~~~~~ig~-------------------vG~D- 62 (306)
T d2abqa1 3 YTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGF-------------------LGGF- 62 (306)
T ss_dssp EEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEE-------------------EEHH-
T ss_pred EEEeCchhHeEEEEeCCcCCCCeEEcCeeeecCCCHHHHHHHHHHHcCCCEEEEEE-------------------ecCc-
Confidence 445568899999999987643 35566778999999999999999999999999 9998
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc-----hhhcCCccEEEEccc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD-----LSLITKAKIFHYGSI 214 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~-----~~~i~~~~~v~~~~~ 214 (400)
.|+++++.|+++||+++++...++ |..++...+. ++..... . ......++++ ...+..++++++.++
T Consensus 63 ~g~~i~~~L~~~gi~~~~v~~~~~--t~~~i~~~~~--~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (306)
T d2abqa1 63 TGAYVRNALEKEEIGLSFIEVEGD--TRINVKIKGK--QETELNG--T--APLIKKEHVQALLEQLTELEKGDVLVLAGS 134 (306)
T ss_dssp HHHHHHHHHHHTTCEECCEEESSC--CEEEEEEESS--SCEEEBC--C--CCCCCHHHHHHHHHHHTTCCTTCEEEEESC
T ss_pred cHHHHHHHHHhcccccccceeeee--eEEEEEEecc--ccccccc--c--cccCCHHHhhhhhhhHhhhccCCEEEEcCc
Confidence 699999999999999999987654 5555554332 2222221 1 1222333322 245678899988775
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHH---HH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AV 291 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~---~~ 291 (400)
.. .....+....+++.+++.+.++++|++. . ......+..+|++++|+.|+..+++....+.+ +.
T Consensus 135 ~~-~~~~~~~~~~~~~~a~~~~~~~~~d~~~--------~---~~~~~~~~~~~~l~~n~~E~~~~~~~~~~~~~~~~~~ 202 (306)
T d2abqa1 135 VP-QAMPQTIYRSMTQIAKERGAFVAVDTSG--------E---ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPH 202 (306)
T ss_dssp CC-TTSCTTHHHHHHHHHHTTTCEEEEECCH--------H---HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHH
T ss_pred cc-cchHHHHHHHHHHHHHHcCCceeccchh--------h---HHHHHhhhcceeecccccccccccccccccccchhhc
Confidence 32 2333456778889999999999999852 2 22334567899999999999999998765543 44
Q ss_pred HHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 292 VYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 292 ~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
++++.+.+.+.++||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 203 ~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~a~ 275 (306)
T d2abqa1 203 VQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAA 275 (306)
T ss_dssp HHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHH
T ss_pred ccccccccccceeeeecccCcccccccccccccccCCccCCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 57888899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 372 GALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|++++++.|. |++++++++++++
T Consensus 276 aa~~~~~~G~----~~~~~v~~~~~~~ 298 (306)
T d2abqa1 276 GSATAFSDGF----CTREEVERLQQQL 298 (306)
T ss_dssp HHHHHHSSSC----CCHHHHHHHHHHH
T ss_pred HHHHhcCCCC----CCHHHHHHHHHHH
Confidence 9999999993 7899999988764
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.6e-38 Score=303.01 Aligned_cols=293 Identities=15% Similarity=0.148 Sum_probs=225.6
Q ss_pred EEEEc-cceeecccCcCCCCcc------CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 63 VVCFG-EMLIDFVPTVSGLSLA------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 63 v~viG-~~~vD~~~~~~~~~~~------~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
|+.+| +.++|++..+++++.. +.......+||++.|+|+++++||.++.+++. +
T Consensus 2 i~t~~lnp~iD~~~~v~~l~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------v 62 (319)
T d2ajra1 2 VLTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGF-------------------V 62 (319)
T ss_dssp EEEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEE-------------------E
T ss_pred EEEEeCChHHcEEEEECCccCCCceeeeecceeeECCCCHHHHHHHHHHHCCCCEEEEEE-------------------e
Confidence 66777 5679999999877432 23456778999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEE
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIF 209 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v 209 (400)
|+ .+|+++.+.|++.|++++...+..+.+|++++.+++.++++.+.+.. ++.. +...+++ .+.+.+++++
T Consensus 63 G~-d~g~~~~~~L~~~~~~i~~~~i~~~~~T~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~v 138 (319)
T d2ajra1 63 GG-YMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINF-PGPD--VTDMDVNHFLRRYKMTLSKVDCV 138 (319)
T ss_dssp EH-HHHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEEEC-CCCC--CCHHHHHHHHHHHHHHHTTCSEE
T ss_pred cC-ccHHHHHHHHHHhCCCCCceeEecCCCCceEEEEEECCCCeEEEEec-CCCc--CCHHHHHHHHHHHHhhcccccEE
Confidence 95 58999999999988776654333344677888888877776655432 2222 3333322 2568899999
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcC-HhHHhcccCCCCCcH
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKIS-EEEISFLTQGEDPYD 288 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N-~~E~~~l~~~~~~~~ 288 (400)
++++. +....+.+.+..+++.++++++++++|+. .. ....+.+....+|++++| ++|++.+++....+.
T Consensus 139 ~~sGs-~~~~~~~~~~~~l~~~a~~~~~~v~~D~s--------~~-~~~~~~~~~~~~~~ikpn~~~e~~~l~g~~~~~~ 208 (319)
T d2ajra1 139 VISGS-IPPGVNEGICNELVRLARERGVFVFVEQT--------PR-LLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTF 208 (319)
T ss_dssp EEESC-CCTTSCTTHHHHHHHHHHHTTCEEEEECC--------HH-HHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSH
T ss_pred EEecC-CcccccHHHHHHHHHHHHhcCCcccccch--------hh-HHHHHhhhcccCcEEeeccHHHHHHHHhhccCCH
Confidence 98752 21222345778899999999999999974 22 233444556788999999 578999999876655
Q ss_pred HHH---HHHHHhCCCcEEEEEecCCcEEEEeCCceEE-EccccccccCCCCchHHHHHHHHHHHH-cCCccccchHHHHH
Q 015777 289 DAV---VYKLFHANLKLLLVTEGPDGCRYYTKDFSGR-VQGLKVEAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQLRD 363 (400)
Q Consensus 289 ~~~---~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~-vpa~~v~vvDttGAGDaF~Agfl~~l~-~g~~~~~~~~~l~~ 363 (400)
++. ++.+++++ +.+|||+|.+|++++.+++.++ .++++++++|||||||+|+|||+++++ +|++ +++
T Consensus 209 ~d~~~~~~~l~~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~i~~~l~~g~~-------~~~ 280 (319)
T d2ajra1 209 DDYVKLAEKLAEKS-QVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLE 280 (319)
T ss_dssp HHHHHHHHHHHHHS-SEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHH
T ss_pred HHHHHHHhhhhhhc-ceeeeecccceeeeeccCCceEecccccCCCCCCCChHHHHHHHHHHHHHHCCCC-------HHH
Confidence 544 45666766 5678999999999988775554 466778999999999999999999977 5999 999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 364 ALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 364 al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|+++|+++|+.++++.|+ .+|++++++++++++
T Consensus 281 a~~~a~a~aa~~~~~~g~--~~~~~~~~~~~~~~~ 313 (319)
T d2ajra1 281 MAKFGFASALAATRRKEK--YMPDLEAIKKEYDHF 313 (319)
T ss_dssp HHHHHHHHHHHHTTSSSC--CCCCHHHHHTTGGGE
T ss_pred HHHHHHHHHHHHhCCCCC--CCCCHHHHHHHHhcC
Confidence 999999999999999996 579999999988764
|
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-39 Score=308.55 Aligned_cols=291 Identities=21% Similarity=0.280 Sum_probs=224.9
Q ss_pred CcEEEEccceeecccCcCC-------CCcc-----------------CCCCceecCCChHHHHHHH----HHHcCCCcee
Q 015777 61 PLVVCFGEMLIDFVPTVSG-------LSLA-----------------ESPAFKKAPGGAPANVAVG----IARLGGSSAF 112 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~N~A~~----larLG~~~~~ 112 (400)
..|+|||+.++|++..++. .+.. +...+...+||+++|+|.+ +++||.++.+
T Consensus 4 ~~il~iG~~~vD~~~~vd~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GG~~~N~a~~~a~~l~~lG~~~~~ 83 (342)
T d1bx4a_ 4 NILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATF 83 (342)
T ss_dssp TCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEEE
T ss_pred CEEEEECcceEEEEEEeCHHHHHHcCCCCCceeechhhHHHHHHHhhcccceEEeCCcHHHHHHHHHHHhccccCceEEE
Confidence 4699999999999987762 1110 1234567899999997776 6789999999
Q ss_pred eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCcccc
Q 015777 113 IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 192 (400)
Q Consensus 113 i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~ 192 (400)
+|. ||+|.+|+++++.|+++||+++++...+. +|+.+++.++.++++.+..+.. ....
T Consensus 84 ig~-------------------vG~D~~G~~i~~~l~~~GVd~~~i~~~~~-~t~~~~~~~~~~~~~~~~~~~~--~~~~ 141 (342)
T d1bx4a_ 84 FGC-------------------IGIDKFGEILKRKAAEAHVDAHYYEQNEQ-PTGTCAACITGDNRSLIANLAA--ANCY 141 (342)
T ss_dssp EEE-------------------EESSHHHHHHHHHHHHTTCEEEEEEESSS-CCCEEEEEEETTEEEEEEECGG--GGGC
T ss_pred Eee-------------------cCCChhhhhhhhhhhhhcccceeeeeecc-cceEEEEEecCCccceeeeccc--cccc
Confidence 999 99999999999999999999999987654 7778888888888887776533 2222
Q ss_pred CCcccc----chhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCc
Q 015777 193 LQEAEL----DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETAD 268 (400)
Q Consensus 193 l~~~~l----~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~d 268 (400)
...+.. ....++.++++++.++.. ....+....+++.+++.+..+.+|+.. +...+..+..+.++++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d 215 (342)
T d1bx4a_ 142 KKEKHLDLEKNWMLVEKARVCYIAGFFL--TVSPESVLKVAHHASENNRIFTLNLSA----PFISQFYKESLMKVMPYVD 215 (342)
T ss_dssp CGGGTTTSHHHHHHHHHCSEEEEEGGGG--GTCHHHHHHHHHHHHHTTCEEEEECCS----HHHHHHTHHHHHHHGGGCS
T ss_pred cchhhhhhhhhHHHHhhcccceeccccc--chhHHHHHHHHHHhhhccceeeccccc----ccchhccccchhhhhcccc
Confidence 222222 124577889999887654 334567777888899999999998752 1112344566777899999
Q ss_pred EEEcCHhHHhcccCCCCC---cHHHHHHHH------HhCCCcEEEEEecCCcEEEEeCCceEEEccc---cccccCCCCc
Q 015777 269 IIKISEEEISFLTQGEDP---YDDAVVYKL------FHANLKLLLVTEGPDGCRYYTKDFSGRVQGL---KVEAVDATGA 336 (400)
Q Consensus 269 vl~~N~~E~~~l~~~~~~---~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~---~v~vvDttGA 336 (400)
++++|++|++.|++.... +.++..+.+ ...+.+.+++|+|++|++++.+++..+++++ ++++||||||
T Consensus 216 il~~Ne~Ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGA 295 (342)
T d1bx4a_ 216 ILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGA 295 (342)
T ss_dssp EEEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHH
T ss_pred EEeecHHHHHHhhCcCCcccchhhhhHHHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcH
Confidence 999999999999876532 233333332 2347888999999999999998877666544 3579999999
Q ss_pred hHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCC-CCCC
Q 015777 337 GDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI-PALP 386 (400)
Q Consensus 337 GDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~-~~~p 386 (400)
||+|+|||+++|++|++ +++|+++|+++||++|++.|++ |.+|
T Consensus 296 GDaF~agfl~~l~~g~~-------~~~a~~~a~~~Aa~~v~~~Ga~~p~~~ 339 (342)
T d1bx4a_ 296 GDAFVGGFLSQLVSDKP-------LTECIRAGHYAASIIIRRTGCTFPEKP 339 (342)
T ss_dssp HHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSCCCSSC
T ss_pred HHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCC
Confidence 99999999999999999 9999999999999999999985 3444
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Probab=100.00 E-value=4.2e-38 Score=304.50 Aligned_cols=289 Identities=22% Similarity=0.297 Sum_probs=216.6
Q ss_pred CCcEEEEccceeecccCcCCC-----Ccc------------------CCCCceecCCChHHHHHHHHHHc---CCCceee
Q 015777 60 SPLVVCFGEMLIDFVPTVSGL-----SLA------------------ESPAFKKAPGGAPANVAVGIARL---GGSSAFI 113 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~-----~~~------------------~~~~~~~~~GG~~~N~A~~larL---G~~~~~i 113 (400)
+|+|+|||+.++|++..++.. +.+ ........+||+++|+|+++++| |..+.++
T Consensus 3 p~kil~iG~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~g~~~~~i 82 (350)
T d2absa1 3 PMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYM 82 (350)
T ss_dssp CCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CcEEEEECCceEEEEEEeCHHHHHHcCCCCCcceecCHHHHHHHHhhhccCceEecCcHHHHHHHHHHHhccCCccEEEE
Confidence 479999999999999877521 000 11234567899999999999999 7789999
Q ss_pred ecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccC
Q 015777 114 GKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193 (400)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l 193 (400)
|. ||+|.+|+++++.|+++||+++++. .++.+|+.+++.++ ++++.+..++. ....+
T Consensus 83 g~-------------------vG~D~~G~~i~~~l~~~gv~~~~~~-~~~~~t~~~~v~~~-~~~~~~~~~~~--~~~~~ 139 (350)
T d2absa1 83 GA-------------------IGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTHLG--ACGSF 139 (350)
T ss_dssp EE-------------------ECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEECG--GGGGC
T ss_pred ec-------------------CCCChhhHhHHHHHHhcCCcccccc-cccccceEEEEEee-ccCcceEeeec--ccccc
Confidence 99 9999999999999999999998765 56778999999887 46666666633 33445
Q ss_pred CccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcC
Q 015777 194 QEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKIS 273 (400)
Q Consensus 194 ~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N 273 (400)
...+.....+...++++..++.+... .......+.+.++..+..+.+|+.... ....++..+..+++++|++++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~di~~~N 214 (350)
T d2absa1 140 RLPEDWTTFASGALIFYATAYTLTAT-PKNALEVAGYAHGIPNAIFTLNLSAPF----CVELYKDAMQSLLLHTNILFGN 214 (350)
T ss_dssp CCCTTHHHHTTTCCEEEEEGGGGTTC-HHHHHHHHHHHHTSTTCEEEEECCCHH----HHHHCHHHHHHHHHTCSEEEEE
T ss_pred cccccccccccccccccceeeeeccc-cchhHHHHHHhhhhccceEEEecchhh----hhhhhhcchhhhcccCCEEEec
Confidence 55555567788889988877654333 334444556667777889999975311 1223355666788999999999
Q ss_pred HhHHhcccCCCCCcH-----------HH---H---HHHHH-----hCCCcEEEEEecCCcEEEEeCCc-----eEEE--c
Q 015777 274 EEEISFLTQGEDPYD-----------DA---V---VYKLF-----HANLKLLLVTEGPDGCRYYTKDF-----SGRV--Q 324 (400)
Q Consensus 274 ~~E~~~l~~~~~~~~-----------~~---~---~~~l~-----~~g~~~vvvT~G~~G~~~~~~~~-----~~~v--p 324 (400)
++|++.|++...... ++ . ..++. ..+++.+++|+|++|+++++++. ..++ |
T Consensus 215 ~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p 294 (350)
T d2absa1 215 EEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVP 294 (350)
T ss_dssp HHHHHHHHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCC
T ss_pred HHHHHHHhCCCCchhhHHHHhhhcchhhHHHHHHHHHHHHHhhhhccCccEEEEECCCCCceeecCCCCcceeeeecccc
Confidence 999999876532111 11 1 11222 23688999999999999988652 2233 4
Q ss_pred cccc-cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 325 GLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 325 a~~v-~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
+.++ ++||||||||+|+|||+++|++|++ +++|+++|+++|+.+|++.|++.
T Consensus 295 ~~~~~~VVDttGAGDaF~ag~l~~ll~g~~-------~~~al~~a~~~Aa~~v~~~Ga~l 347 (350)
T d2absa1 295 VVAAEKIVDTNGAGDAFVGGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFSL 347 (350)
T ss_dssp CCCGGGCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCCC
T ss_pred cCCCCCccCCCcHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhcccCCCC
Confidence 4333 6899999999999999999999999 99999999999999999999864
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=1.6e-32 Score=257.69 Aligned_cols=276 Identities=17% Similarity=0.118 Sum_probs=199.5
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
.+|++||++++|++.... .....+||.+.|+|+++++||.++.++|. +|+|..
T Consensus 7 ~~i~~vg~~~~d~~~~~~--------~~~~~~GG~~~n~a~~~~~lG~~~~~i~~-------------------vG~D~~ 59 (288)
T d1vk4a_ 7 HMITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITK-------------------CTREDV 59 (288)
T ss_dssp SEEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEE-------------------ECTTTG
T ss_pred ceEEEECCceeeEEecCC--------cEEEecCCHHHHHHHHHHHcCCCEEEEEE-------------------eCCChH
Confidence 469999999999887643 23668999999999999999999999999 999998
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCch
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEP 220 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~ 220 (400)
|. .+.|+++||+++++.. +..|.+..++.+..+++.+..... ...+..+++. ..+++++++.++... +.
T Consensus 60 ~~--~~~l~~~gi~~~~i~~--~~~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~-~~ 128 (288)
T d1vk4a_ 60 SK--FSFLRDNGVEVVFLKS--PRTTSIENRYGSDPDTRESFLISA---ADPFTESDLA---FIEGEAVHINPLWYG-EF 128 (288)
T ss_dssp GG--GTTTGGGTCEEEEEEC--SSCEEEEEEC-----CCEEEEEEC---CCCCCGGGGG---GCCSSEEEECCSSTT-SS
T ss_pred HH--HHHHHHcCCcEEeecc--CCcceEEEEEecCCCeeEEEeehh---hhcCChhhhh---hhccceEEEchhhhc-cc
Confidence 85 4889999999998753 334555555554445555554422 1233444332 235788887765332 22
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCCCC---CCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRLPL---WPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~---~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
..++++.+++.++.+++|++..... +.......+.+.++++++|++++|++|++.+++... .++.++.+..
T Consensus 129 ----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~i~~N~~E~~~l~~~~~--~~~~~~~~~~ 202 (288)
T d1vk4a_ 129 ----PEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTND--LRESCRIIRS 202 (288)
T ss_dssp ----CGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSCSC--HHHHHHHHHH
T ss_pred ----hHHHHHHHHHhCcceeeccccccccccccccccccHHHHHHHHHhCCcccCCHHHHHHHhhhhh--HHHHHhhhhc
Confidence 2345566788899999998521100 000001123456788999999999999999988765 3455556666
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH-cCCccccchHHHHHHHHHHHHHHHHHh
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~-~g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
.+.. ++++.|..|+.+ .++..++.+.++++++|||||||+|+|||+++++ +|++ +++|+++|+++|++++
T Consensus 203 ~~~~-~v~~~g~~~~~~-~~~~~~~~~~~~~~vvDttGAGDsF~ag~i~~~l~~g~~-------~~~a~~~A~~~Aa~~v 273 (288)
T d1vk4a_ 203 FGAK-IILATHASGVIV-FDGNFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKM 273 (288)
T ss_dssp TTCS-SEEEEETTEEEE-ESSSEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHT
T ss_pred ccce-eeeccccceeec-cccccccccCCCCccCCCCCHHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHh
Confidence 6665 456667777765 4566788888899999999999999999999976 7889 9999999999999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 015777 377 MERGAIPALPTREAVLN 393 (400)
Q Consensus 377 ~~~G~~~~~p~~~~l~~ 393 (400)
++.|+ ++++|+++
T Consensus 274 ~~~Gp----~~~~~~~~ 286 (288)
T d1vk4a_ 274 RHPGP----LRREDLEA 286 (288)
T ss_dssp TSSSS----CCGGGGGG
T ss_pred CcCCC----CCHHHHHh
Confidence 99994 57888765
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=3.5e-15 Score=139.52 Aligned_cols=164 Identities=15% Similarity=0.120 Sum_probs=119.1
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCCC---CCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~~---~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.|.+..|.+. .....+.+.++++..++ .+.++++||..... .....+......+++++++|+++||..|++.
T Consensus 75 ~~daI~tG~l~--s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea~~ 152 (288)
T d1vi9a_ 75 TCDAVLSGYLG--SAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEI 152 (288)
T ss_dssp GCCEEEECCCS--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCEEEEeccC--ChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHHHH
Confidence 57778776543 33334455666666554 36889999953111 1122344455567799999999999999999
Q ss_pred ccCCCCCcHH---HHHHHHHhCCCcEEEEEecCCc--------EEEEeCCceEEE--ccccccccCCCCchHHHHHHHHH
Q 015777 280 LTQGEDPYDD---AVVYKLFHANLKLLLVTEGPDG--------CRYYTKDFSGRV--QGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 280 l~~~~~~~~~---~~~~~l~~~g~~~vvvT~G~~G--------~~~~~~~~~~~v--pa~~v~vvDttGAGDaF~Agfl~ 346 (400)
|+|.+..+.+ +++++|+++|++.|+||.+..| .+++..++.+++ |..+....|++|+||+|.|+|++
T Consensus 153 L~g~~i~~~~~~~~aa~~L~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GtGD~fsa~l~a 232 (288)
T d1vi9a_ 153 LCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLV 232 (288)
T ss_dssp HHTSCCCSHHHHHHHHHHHHHTSCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECCCCTTCCCSCHHHHHHHHHHH
T ss_pred hhccccchhHHHHHHHHHHHhcCCCEEEEEecCccccccCceeEEEEeCCceEEecccccccCCCCCCChhHHHHHHHHH
Confidence 9998866554 4457888999999999977654 245556655544 44555688999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+|++|.+ +++|+++|.+.-...++
T Consensus 233 ~l~~G~~-------l~~A~~~A~~~v~~~l~ 256 (288)
T d1vi9a_ 233 KLLQGAT-------LQEALEHVTAAVYEIMV 256 (288)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHH
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 9999999 99999999877554443
|
| >d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Thermus thermophilus [TaxId: 274]
Probab=99.42 E-value=3.3e-12 Score=117.03 Aligned_cols=162 Identities=17% Similarity=0.101 Sum_probs=118.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhh-CCCeEEEeCCCCCCC---CCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKD-AGVVLSYDPNLRLPL---WPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~---~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.|.+.++-+. . .+....+.+..++ ...++++||...... ....+.....++++++.+|+++||..|++.|
T Consensus 70 ~~daIkiG~l~--s---~~~~~~i~~~l~~~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Llp~adiiTPN~~Ea~~L 144 (258)
T d1ub0a_ 70 PLHAAKTGALG--D---AAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEAL 144 (258)
T ss_dssp CCSEEEECCCC--S---HHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CccEEEEeccc--c---chHHHHHHHHHHHhccccceEeeeeecccCccccchhHHHHHHHhhcccceeecCCHHHHhhh
Confidence 57888877542 2 2333344444434 347899998542221 1123445566667999999999999999999
Q ss_pred cCCCCCcHH---HHHHHHHhCCCcEEEEEecCC----cE-EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 281 TQGEDPYDD---AVVYKLFHANLKLLLVTEGPD----GC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 281 ~~~~~~~~~---~~~~~l~~~g~~~vvvT~G~~----G~-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
+|....+.+ +++++|+++|++.|+||-|.. .. .++++++.+.+..+++...++.|+||+|.++|++.|++|.
T Consensus 145 ~g~~~~~~~d~~~aa~~L~~~g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtGd~~asaia~~La~G~ 224 (258)
T d1ub0a_ 145 LGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGR 224 (258)
T ss_dssp HCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHHHHHHHhCCCeEEEeccccccccccceeccCCeEEecccceecCCCCCChHHHHHHHHHHHHHcCC
Confidence 998876554 456788999999999997643 22 4455677777777777778899999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+ +++|++.|...-...+..
T Consensus 225 ~-------l~~Av~~A~~~v~~~i~~ 243 (258)
T d1ub0a_ 225 P-------LAEAVAEAKAYLTRALKT 243 (258)
T ss_dssp C-------HHHHHHHHHHHHHHHHHT
T ss_pred C-------HHHHHHHHHHHHHHHHHh
Confidence 9 999999999877666643
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.34 E-value=9.4e-12 Score=116.88 Aligned_cols=161 Identities=17% Similarity=0.118 Sum_probs=107.1
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCC------CCCCChHHHHHhHH-hhhccCcEEE
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL------PLWPSADKAREGIL-SIWETADIIK 271 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~------~~~~~~~~~~~~~~-~ll~~~dvl~ 271 (400)
+.+.+.|.+..|-+. .....+.+.++++..+. .+.++++||.... ..+.+.+. .+.++ .+++.+|+++
T Consensus 69 ~~l~~~daI~tG~l~--s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~-~~~~~~~Llp~adiIT 145 (309)
T d1lhpa_ 69 NHVNQYDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDL-LPVYREKVVPVADIIT 145 (309)
T ss_dssp TTCCCCSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGG-HHHHHHTTGGGCSEEC
T ss_pred ccccccCeeeecccC--CHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHH-HHHHHHhhcCcCcEEe
Confidence 344568888777542 22223344455554433 3688999996422 12223333 34444 5899999999
Q ss_pred cCHhHHhcccCCCCCcHH---HHHHHHHhCCCcEEEEEecCC------cEEEEeCC------------ceEEEccccccc
Q 015777 272 ISEEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPD------GCRYYTKD------------FSGRVQGLKVEA 330 (400)
Q Consensus 272 ~N~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvT~G~~------G~~~~~~~------------~~~~vpa~~v~v 330 (400)
||..|++.|+|.+..+.+ ++++.|+++|++.|+||-|.. +.++.... +.+.++.++++
T Consensus 146 PN~~Ea~~Ltg~~~~~~~~~~~aa~~L~~~g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~- 224 (309)
T d1lhpa_ 146 PNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEMHKVD- 224 (309)
T ss_dssp CCHHHHHHHHTCCCCSHHHHHHHHHHHHHHSCSEEEECCCCCCCTTCTTEEEEEEEEEEC---CCCEEEEEEEEEECCS-
T ss_pred ccHHHHhHHhccccCCHHHHHHHHHHHHhcCCCEEEEEccccCCCCCCcEEEEeccceeeeccccceeeeEEEeecccC-
Confidence 999999999998865543 456788899999999997642 22222111 11233333433
Q ss_pred cCCCCchHHHHHHHHHHHHcCC-ccccchHHHHHHHHHHHHHH
Q 015777 331 VDATGAGDAFVAGILSQLSTDF-SLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 331 vDttGAGDaF~Agfl~~l~~g~-~~~~~~~~l~~al~~A~a~A 372 (400)
.+++|+||+|.|+|++.+++|. + +++|++.|.+.-
T Consensus 225 ~~~~GtGD~fsa~l~a~l~~g~~~-------L~~A~~~A~~~v 260 (309)
T d1lhpa_ 225 AVFVGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSAM 260 (309)
T ss_dssp SCCSSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHH
Confidence 4679999999999999999875 7 999999998663
|
| >d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Salmonella typhimurium [TaxId: 90371]
Probab=99.33 E-value=2.1e-11 Score=112.02 Aligned_cols=162 Identities=13% Similarity=0.070 Sum_probs=111.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhC-CCeEEEeCCCCCC---CCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~---~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.|.+.+|-+. . .+....+.+..++. ..++++||..... .....+......+++++.+|+++||..|++.|
T Consensus 72 ~~~aIkiG~l~--s---~~~i~~v~~~l~~~~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Llp~adviTPN~~Ea~~L 146 (266)
T d1jxha_ 72 RIDTTKIGMLA--E---TDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAAL 146 (266)
T ss_dssp CCSEEEECCCC--S---HHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHH
T ss_pred cCceEEEcccc--h---HHHHHHHHHHHHhccCCceEEeccccccccchhhHHHHHHHHHHHhhhhhheecCCHHHHHHH
Confidence 56777777542 2 33444444444443 4788999854221 11233344444456899999999999999988
Q ss_pred cCCCCCc----HHHHHHHHHhCCCcEEEEEecCCc-----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC
Q 015777 281 TQGEDPY----DDAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351 (400)
Q Consensus 281 ~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G-----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g 351 (400)
++..... ..++++.+.+.|++.|++|-|... .+++++++......+++...++.|.||+|.+++.+.|++|
T Consensus 147 l~~~~~~~~~~~~~aa~~l~~~g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hGTGc~lasaiaa~La~G 226 (266)
T d1jxha_ 147 LDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRH 226 (266)
T ss_dssp HTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGGS
T ss_pred hcCCcccChHHHHHHHHHHHhcCCceEEEeccccCCCcceEEEEcCCceEEEeeccccCCCCCCchHHHHHHHHHHHHcC
Confidence 7765432 234567888999999999976543 2455666666666666677788999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 352 FSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 352 ~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
.+ +++|++.|.......+..
T Consensus 227 ~~-------l~~Av~~A~~~v~~~i~~ 246 (266)
T d1jxha_ 227 RS-------WGETVNEAKAWLSAALAQ 246 (266)
T ss_dssp SS-------HHHHHHHHHHHHHHHHTT
T ss_pred CC-------HHHHHHHHHHHHHHHHHh
Confidence 99 999999999888777754
|
| >d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Bacillus subtilis [TaxId: 1423]
Probab=98.70 E-value=1.8e-07 Score=84.94 Aligned_cols=157 Identities=15% Similarity=0.018 Sum_probs=101.6
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~E~~ 278 (400)
++.+.++.+++.. ....+...+.+....+.+++.++|+++||..... +. .-.+...+++. +.+||++|..|+.
T Consensus 54 e~~~~a~alviN~-Gtl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvga---s~-~R~~~~~~ll~~~~~tVI~gN~~Ei~ 128 (269)
T d1ekqa_ 54 DMAKIAGALVLNI-GTLSKESVEAMIIAGKSANEHGVPVILDPVGAGA---TP-FRTESARDIIREVRLAAIRGNAAEIA 128 (269)
T ss_dssp HHHHHSSEEEEEC-TTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---BH-HHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhccceEEec-CCCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCC---ch-hHHHHHHHHHHhCCCceEcCCHHHHH
Confidence 5666677777643 2333344567778888999999999999964321 11 22344445554 5799999999999
Q ss_pred cccCCCCC------------cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHH
Q 015777 279 FLTQGEDP------------YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 279 ~l~~~~~~------------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
.|.|.... +..+.++++.++.-..|++| |+. -++.++++.+.+..-....-..+|.||++.+.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~d~~~~A~~la~~~~~vVvlk-G~~-D~I~dg~~~~~~~~G~~~m~~itGtGc~Ls~~iaa 206 (269)
T d1ekqa_ 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEV-DVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (269)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSS-EEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCccCCcCCcCCcccHHHHHHHHHHHHHhcCCEEEec-CCc-eEEEeCCeeEEecCCChhhccCCcchHHHHHHHHH
Confidence 99985421 11234566666555566665 433 34555556666654333344458999999998888
Q ss_pred HHHcCCccccchHHHHHHHHHHHHH
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
.+.++.+ +.+|+..|...
T Consensus 207 ~la~~~~-------~~~A~~~A~~~ 224 (269)
T d1ekqa_ 207 FCAVEEN-------PLFAAIAAISS 224 (269)
T ss_dssp HHTTCSS-------HHHHHHHHHHH
T ss_pred HHhCCCC-------HHHHHHHHHHH
Confidence 8888888 77777766644
|
| >d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.42 E-value=9.6e-07 Score=79.87 Aligned_cols=155 Identities=17% Similarity=0.015 Sum_probs=92.8
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhHHhc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISF 279 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E~~~ 279 (400)
++.+.++.+++..- ...+...+.+..+.+.+++.++|+++||..... +..+ .+...+++ ..+++|++|..|+..
T Consensus 52 e~~~~a~al~iN~G-tl~~~~~~~m~~a~~~A~~~~~PvVLDPVgvga---s~~R-~~~~~~ll~~~~~vItgN~~Ei~~ 126 (264)
T d1v8aa_ 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKFR-TRVSLEILSRGVDVLKGNFGEISA 126 (264)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHHH-HHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHhcCceEeeCC-CCCHHHHHHHHHHHHHHHHcCCCEEEcCcccCc---chhH-HHHHHHHhccCCcEEcCCHHHHHH
Confidence 45555666665432 223334567778888999999999999964322 1211 22333333 368999999999999
Q ss_pred ccCCCCC---------c---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 280 LTQGEDP---------Y---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 280 l~~~~~~---------~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
|.|.... . ..+.++.+.++.-..|++| |+. -++.++++.+.++.-....-..+|.||++.+.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~d~~~~a~~lA~~~~~vVvlk-G~~-D~I~dg~~~~~~~~G~~~m~~itGtGc~Ls~~iaa~ 204 (264)
T d1v8aa_ 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAV-DYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (264)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSS-EEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCcccCCCCCCcccccHHHHHHHHHHHHHHhCCEEEec-CCe-eEEEcCCEEEEeCCCCchhccCCcccHHHHHHHHHH
Confidence 9875321 1 1234556655544455555 654 345566667766654444445689999866655555
Q ss_pred HHcCCccccchHHHHHHHHHHHH
Q 015777 348 LSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 348 l~~g~~~~~~~~~l~~al~~A~a 370 (400)
+..+ + ..+|+..|..
T Consensus 205 la~~-~-------~~~Aa~~A~~ 219 (264)
T d1v8aa_ 205 VAVT-E-------PLKATTSALV 219 (264)
T ss_dssp HTTS-C-------HHHHHHHHHH
T ss_pred HhcC-C-------HHHHHHHHHH
Confidence 5554 4 3456555543
|
| >d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein YxkO species: Bacillus subtilis [TaxId: 1423]
Probab=98.29 E-value=2.5e-06 Score=77.60 Aligned_cols=171 Identities=16% Similarity=0.021 Sum_probs=107.0
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
+.++.|.+.++.-.-.. +...++++.+.+.++++++|...-.. ......+...|++||..|+..|+
T Consensus 91 ~~~~~~~~~iGpGlg~~----~~~~~~~~~l~~~~~p~VlDAdal~~----------~~~~~~~~~~IiTPH~gE~~rL~ 156 (275)
T d1kyha_ 91 LEETYRAIAIGPGLPQT----ESVQQAVDHVLTADCPVILDAGALAK----------RTYPKREGPVILTPHPGEFFRMT 156 (275)
T ss_dssp CCSCCSEEEECTTCCSS----HHHHHHHHHHTTSSSCEEECGGGCCS----------CCCCCCSSCEEECCCHHHHHHHH
T ss_pred hhhccceEEEeccccch----HHHHHHHHHHhhccCceeehhhhhhh----------hhcccccCceEecccHHHHHHhc
Confidence 34577888877532222 23445666777788999999853211 01113456789999999999999
Q ss_pred CCCCCc----HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 282 QGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 282 ~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
+....+ ..+.++++.+..-. +++-.|....+ ...+...++-...-....+.|.||++.|.+...+.+|.+
T Consensus 157 g~~~~~~~~~~~~~a~~~~~~~~~-~vllKG~~t~I-~~~~g~~~~~~~g~~~lat~GsGDvLaGiIa~~lAq~~~---- 230 (275)
T d1kyha_ 157 GVPVNELQKKRAEYAKEWAAQLQT-VIVLKGNQTVI-AFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED---- 230 (275)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTS-EEEECSTTCEE-ECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS----
T ss_pred CcccchhhccHHHHHHHHHHHhCC-eEEeccCcceE-EcCCCceeecCCCCccccCCccccHHHHHHHHHHHcCCC----
Confidence 976532 23445555544333 45555665544 443434444444445568899999999999999999999
Q ss_pred hHHHHHHHHHHHH---HHH-HHhcccCCCCCCCCHHHHHHHHhC
Q 015777 358 EDQLRDALRFANA---CGA-LTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 358 ~~~l~~al~~A~a---~Aa-~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+.+|+..|+. .|+ ....+.|.. ++ ..+||.+.+.+
T Consensus 231 ---~~~Aa~~a~~lh~~aa~~~~~~~~~~-~~-~asdi~~~ip~ 269 (275)
T d1kyha_ 231 ---PKHAVLNAVYLHGACAELWTDEHSAH-TL-LAHELSDILPR 269 (275)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHSCGG-GC-CTHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCC-CC-CHHHHHHHHHH
Confidence 9999999953 333 333444432 33 44566665543
|
| >d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-specific phosphofructokinase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.08 E-value=4.3e-05 Score=73.58 Aligned_cols=75 Identities=12% Similarity=0.042 Sum_probs=54.2
Q ss_pred CCccEEEEccccccCch-----hHH----HHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCH
Q 015777 204 TKAKIFHYGSISLITEP-----CKS----AHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISE 274 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~-----~~~----~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~ 274 (400)
.+.|.++++|+.++.+. .++ ...+.+...++.++++.++... +.+.+-....+..+++++|-+-+||
T Consensus 213 ~~~dl~vlSGlq~l~~~~~~~~~~~~~l~~~~~~l~~~~~~~i~iHlElAs----~~d~~l~~~i~~~ilp~vDSlGmNE 288 (450)
T d1u2xa_ 213 KEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFAS----VQDRKLRKKIITNILPFVDSVGIDE 288 (450)
T ss_dssp HTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCC----CCCHHHHHHHHHHHGGGSSEEEEEH
T ss_pred cCCCEEEEechhhhhccccCchhHHHHHHHHHHHHHhCCCCCCeEEEEecc----cchHHHHHHHHHHhccccccCCCCH
Confidence 36799999999876321 222 2223344456678999999865 3456777777778999999999999
Q ss_pred hHHhcccC
Q 015777 275 EEISFLTQ 282 (400)
Q Consensus 275 ~E~~~l~~ 282 (400)
.|+..|..
T Consensus 289 qEL~~l~~ 296 (450)
T d1u2xa_ 289 AEIAQILS 296 (450)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99977753
|
| >d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=97.95 E-value=0.00016 Score=69.81 Aligned_cols=75 Identities=8% Similarity=0.158 Sum_probs=52.9
Q ss_pred hcCCccEEEEccccccCc-----hh----HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc
Q 015777 202 LITKAKIFHYGSISLITE-----PC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI 272 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~-----~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~ 272 (400)
...+.|.++++|+.+..+ .. .+.+.+.+...+..++++.++.... .+ ..++..+.++++++|-+=+
T Consensus 230 ~~~~~dl~vlSGlqml~~~~~~~~~~~~~l~~~~~~l~~l~~~~i~iH~ElAs~----~d-~~l~~~i~~ilp~vDSlGm 304 (467)
T d1gc5a_ 230 ITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYT----AN-RRVREALVELLPKFTSVGL 304 (467)
T ss_dssp HHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCC----CC-HHHHHHHHHHGGGCSEEEE
T ss_pred hccCCCEEEEEchhhccccCCCchhHHHHHHHHHHHHHhcCcCCCceEEEecch----hh-HHHHHHHHHhccccccCCC
Confidence 344789999999977642 11 2223344555567789999998743 33 4566666679999999999
Q ss_pred CHhHHhccc
Q 015777 273 SEEEISFLT 281 (400)
Q Consensus 273 N~~E~~~l~ 281 (400)
||.|+..|.
T Consensus 305 NEqEL~~l~ 313 (467)
T d1gc5a_ 305 NEVELASIM 313 (467)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999997665
|
| >d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.85 E-value=0.0007 Score=64.93 Aligned_cols=74 Identities=14% Similarity=0.216 Sum_probs=53.0
Q ss_pred cCCccEEEEccccccCchh----HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHh
Q 015777 203 ITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEIS 278 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~ 278 (400)
..+.|.++++|+-++...+ .+...+.++..+..+++|.++.... .+ ..++..+.++++++|-+=+||.|+.
T Consensus 222 ~~~~dl~vlSGlqmm~~~~~~~~~~~~~~~l~~~~~~~i~IH~ElAs~----~d-~~l~~~i~~vlp~vDSlGmNEqEL~ 296 (454)
T d1ua4a_ 222 IKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPVHLEFAFT----PD-EKVREEILNVLGMFYSVGLNEVELA 296 (454)
T ss_dssp GGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCEEEECCCC----CC-HHHHHHHHHHGGGCSEEEECHHHHH
T ss_pred ccCCCEEEEEccccccchhhHHHHHHHHHHHHhcCccCCceEEEeccc----cH-HHHHHHHHHhCCcCCcCCCCHHHHH
Confidence 3468999999997654322 2233344555567899999999742 23 4566667789999999999999988
Q ss_pred ccc
Q 015777 279 FLT 281 (400)
Q Consensus 279 ~l~ 281 (400)
.|.
T Consensus 297 ~l~ 299 (454)
T d1ua4a_ 297 SIM 299 (454)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
|
| >d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=97.79 E-value=0.00039 Score=66.72 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=53.6
Q ss_pred cCCccEEEEccccccCchh----HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHh
Q 015777 203 ITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEIS 278 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~ 278 (400)
-.+.|+++++|+-++...+ .+...+.++..+..++++.++.... .+ +.++..+.++++++|-+=+||.|+.
T Consensus 220 ~~~pdl~vlSGlq~l~~~~~~~~~~~~~~~l~~~~~~~i~iH~ElAs~----~d-~~~~~~l~~vlp~vdSlGmNEqEL~ 294 (451)
T d1l2la_ 220 AKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFT----PD-EVVRLEIVKLLKHFYSVGLNEVELA 294 (451)
T ss_dssp HTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCC----SS-HHHHHHHHHHGGGCSEEEECHHHHH
T ss_pred hcCCCEEEEecccccccccchHHHHHHHHHHHhcCCcCCcEEEEeccc----hH-HHHHHHHHHhcccCccCCcCHHHHH
Confidence 3578999999987654322 2333444555677899999998742 23 5666667789999999999999987
Q ss_pred ccc
Q 015777 279 FLT 281 (400)
Q Consensus 279 ~l~ 281 (400)
.|.
T Consensus 295 ~l~ 297 (451)
T d1l2la_ 295 SVV 297 (451)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
|
| >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein TM0922, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.45 E-value=0.00094 Score=60.16 Aligned_cols=174 Identities=11% Similarity=0.006 Sum_probs=100.7
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+..++.+.+.++.-.-.. ......+.+.......++++|...-.. + . ...+. ..+...|++||..|++.|
T Consensus 93 ~~~~~~~a~~iGpGlg~~---~~~~~~~~~~~~~~~~~~vldadal~~-~--~---~~~l~-~~~~~~IlTPH~gE~~rL 162 (278)
T d2ax3a1 93 ELSKDVDVVAIGPGLGNN---EHVREFVNEFLKTLEKPAVIDADAINV-L--D---TSVLK-ERKSPAVLTPHPGEMARL 162 (278)
T ss_dssp HHHHTCSEEEECTTCCCS---HHHHHHHHHHHHHCCSCEEECHHHHHT-C--C---HHHHH-TCSSCEEECCCHHHHHHH
T ss_pred HhcccCCEEEecCCcccc---hHHHHHHHHHHhccchheecchhhhhh-h--h---hhhhh-hcCCCEEeCCCHhHHHHH
Confidence 445678888887532222 233333444556778899998631000 0 0 01111 123457899999999999
Q ss_pred cCCCCCc---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 281 TQGEDPY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 281 ~~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
++....+ ..+.++.+.++.-. +|+-.|.. .++.++++.+..+. ......+.|.||+..|.+..-+.++.+
T Consensus 163 ~~~~~~~~~~~~~~a~~~a~~~~~-~vvlKG~~-t~i~~~~~~~~~~~-g~~~la~~GtGDvLaGiIaallAq~~~---- 235 (278)
T d2ax3a1 163 VKKTVGDVKYNYELAEEFAKENDC-VLVLKSAT-TIVTDGEKTLFNIT-GNTGLSKGGSGDVLTGMIAGFIAQGLS---- 235 (278)
T ss_dssp HTCCHHHHTTCHHHHHHHHHHHTS-EEEECSSS-EEEECSSCEEEECC-CC-CCSSTTHHHHHHHHHHHHHHTTCC----
T ss_pred hhcccchhhhHHHHHHHHHHHcCC-cEEecCcc-ccccCcccceeecC-CCCccccccchhHHHHHHHHHHHcCCC----
Confidence 9975422 22444444433222 33334443 34445555544433 334567899999999988888889999
Q ss_pred hHHHHHHHHHHHHH---HHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 358 EDQLRDALRFANAC---GALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 358 ~~~l~~al~~A~a~---Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+.+|+..|... |+....+.+ .++ ..+||.+.+.+
T Consensus 236 ---~~~A~~~a~~lhg~aa~~a~~~~--~g~-~Asdi~~~ip~ 272 (278)
T d2ax3a1 236 ---PLEASTVSVYLHGFAAELFEQDE--RGL-TASELLRLIPE 272 (278)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCSSCG--GGC-CHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcCC--CCc-CHHHHHHHHHH
Confidence 88999888543 333333332 233 67788776654
|