Citrus Sinensis ID: 015780

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Protein Sequence
MVNKAIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKNGNSVKHHHSINGANGANGYGARTQQGA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEEccccccEEEEEEcccccccccccEEEEEEcccccEEEEEcccccccccccccccccEEEcccEEEEccEEEEEEEEEEcccccccccEEEcccccccccccccccccccccccEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHcHccccccccEEEEEEcccccEEEEEEEEcccccccEEEEEEccccccccccEEEEEEEcccccEEEEEEEcccccccccccccEEEccccccEEEcccEEEEEEEEEccccccEEEEEEEccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MVNKAIACALFFSFVAALFASSYAQqtcgrqafnnnkvystctdlpvlnsflhwnydqstnTVDLAFRHTTTSSSRWVAWAlnpsgqrmagsqCLVAfqnstgrpvayttpigsgsptlqpgslsfqvpnisatlegnQWTIFATLQLTNNLLSTnqvwqegpmngdtpgahamsgdnarsvgtidfrtgqttagggssdsrrrrrnthgvlnavSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGwgtgiklgndspgikynkhrNIGIALFAIGTLQMFAMLlrpkpdhkyrLYWNIYHWSLGYSVIVLSIINIfegfdildpekkWKRAYIGILIFLGAVAALLEAITWVIVLKrkngnsvkhhhsingangangygartqqga
Flexible Loop (DISEMBL)
MVNKAIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVgtidfrtgqttagggssdsrrrrrnthgvlnavswgvLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKNGNSVKHHhsingangangygartqqga
Low Complexity Region (SEG)
MVNKAIACalffsfvaalfassYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFAtlqltnnllstnqVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQTTAgggssdsrrrrrNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKNGNSVKHHHSIngangangygaRTQQGA
Disordered region (IsUnstruct)
****AIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTP************LSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVW*************************************************HGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKN***************************
Disordered Region (DISOPRED)
***KAIACALFFSFVAALFASS**********FNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVA********************VPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWV**********************************
Disordered Region (DISEMBL)
MVNKAIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQ**************RNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKNGNSVKHHHSINGANGANGYGARTQQGA
Disordered Region (DISPRO)
*VNKAIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQ*******SDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRK****************************
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVNKAIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKNGNSVKHHHSINGANGANGYGARTQQGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	400	2.2.26 [Sep-21-2011]
Q94BT2	252	Auxin-induced in root cul	no	no	0.532	0.845	0.337	2e-23
Q6INU7	590	Putative ferric-chelate r	N/A	no	0.407	0.276	0.258	3e-06
Q8K385	592	Ferric-chelate reductase	yes	no	0.422	0.285	0.247	9e-05
Q6ZNA5	592	Ferric-chelate reductase	no	no	0.337	0.228	0.255	0.0001

>sp|Q94BT2|AIR12_ARATH Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3

 Score =  110 bits (274), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 36/249 (14%)

Query: 5   AIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVD 64
           A+AC     FV+ L + + +QQ C  Q  N+   + +C DLPVLNS+LH+ Y+ S +++ 
Sbjct: 12  AVAC-----FVS-LISPAISQQACKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSSNSSLS 65

Query: 65  LAFRHTTTSSS-RWVAWALNPSGQRMAGSQCLVAFQNSTG-RPVAYTTPIGSGSPTLQPG 122
           +AF  T + ++  WVAWA+NP+G +MAGSQ  +A+++  G  PV  T  I S S +L  G
Sbjct: 66  VAFVATPSQANGGWVAWAINPTGTKMAGSQAFLAYRSGGGAAPVVKTYNISSYS-SLVEG 124

Query: 123 SLSFQVPNISA-TLEGNQWTIFATLQLTNNLLSTNQVWQ-EGPMNGDTPGAHAMSGDNAR 180
            L+F   N+ A +L G +  IF T+++     S NQVWQ  G +    PG H    DN  
Sbjct: 125 KLAFDFWNLRAESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLG 184

Query: 181 SVGTIDF-------------------RTGQTTAG---GGSSDSRRRRRNTHGVLNAVSWG 218
           S   + F                    +G TT G   GG  ++    RN +     V+ G
Sbjct: 185 SHRVLSFTEDAAPGSAPSPGSAPAPGTSGSTTPGTAAGGPGNAGSLTRNVN---FGVNLG 241

Query: 219 VLIPMGAMI 227
           +L+ +G++ 
Sbjct: 242 ILVLLGSIF 250

Arabidopsis thaliana (taxid: 3702)

>sp|Q6INU7|FRRS1_XENLA Putative ferric-chelate reductase 1 OS=Xenopus laevis GN=frrs1 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 11/174 (6%)

Query: 209 HGVLNAVSWGVLIPMGAMIARYLK-VFKTA----NPAWFYLHVACQASGYIVGVAGWGTG 263
           HG +  ++W   + +G +IAR+ K V+ T+       WF +H     +   + V  +   
Sbjct: 372 HGAMMFIAWMTTVSIGVIIARFFKPVWPTSSLFGEKIWFQIHRCLMITTVFLTVVAFVLP 431

Query: 264 -IKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVI 322
            I  G  S    Y+ H  +G+ +  +  LQ    + RP P    R  +N  HW+ G +  
Sbjct: 432 FIYRGYFSKRAGYHPH--LGVTVMILTVLQPVLAVFRPPPQTHRRGIFNWTHWATGTAAR 489

Query: 323 VLSIINIFEGFDI--LDPEKKWKR-AYIGILIFLGAVAALLEAITWVIVLKRKN 373
           ++++  +F G D+  LD    W     IG +++   V  LLEA  + ++ K K 
Sbjct: 490 IIAVAAMFLGMDLQALDLPDPWDTYTMIGFVLWHVFVDLLLEAHGFCLLKKAKT 543

Putative ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8K385|FRRS1_MOUSE Ferric-chelate reductase 1 OS=Mus musculus GN=FRRS1 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 13/182 (7%)

Query: 189 TGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYL-----KVFKTANPAWFY 243
           T    + GGS  S   +   HG L  V+W   + +G ++AR+      K F     AWF 
Sbjct: 355 TDTPKSVGGSRSSPLLK--AHGALMFVAWMTTVSIGVLVARFFRSVWSKAFFLREAAWFQ 412

Query: 244 LH-VACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKP 302
           +H +   A+  +  VA     +  G  S    Y  H  +G  +  +  LQ      RP  
Sbjct: 413 VHRMLMVATSLLTCVAFVLPFVYRGGWSWRAGY--HPYLGCTVMTLAVLQPLLATFRPPL 470

Query: 303 DHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILD---PEKKWKRAYIGILIFLGAVAAL 359
               R  +N  HWS+G +  ++++  +F G D+     P  +   A +G +++      +
Sbjct: 471 HDPRRQVFNWTHWSVGTAARIIAVAAMFLGMDLPGLNLPSPQKTYAMMGFVVWHIGTEVI 530

Query: 360 LE 361
           LE
Sbjct: 531 LE 532

Ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6ZNA5|FRRS1_HUMAN Ferric-chelate reductase 1 OS=Homo sapiens GN=FRRS1 PE=2 SV=2

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 207 NTHGVLNAVSWGVLIPMGAMIARYLK-----VFKTANPAWFYLHVACQ-ASGYIVGVAGW 260
             HG L  V+W   + +G ++AR+ K      F     AWF +H      +  +  +A  
Sbjct: 371 KVHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFV 430

Query: 261 GTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYS 320
              I  G  S    Y  H  +G  +  +  LQ    + RP      R  +N  HWS+G +
Sbjct: 431 MPFIYRGGWSRHAGY--HPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMFNWTHWSMGTA 488

Query: 321 VIVLSIINIFEGFDI--LDPEKKWK 343
             ++++  +F G D+  L+    WK
Sbjct: 489 ARIIAVAAMFLGMDLPGLNLPDSWK 513

Ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
255582433	385	Auxin-induced in root cultures protein 1	0.957	0.994	0.636	1e-144
13785207	400	putative membrane protein [Solanum tuber	0.992	0.992	0.589	1e-133
13785211	400	putative membrane protein [Solanum tuber	0.992	0.992	0.587	1e-133
13785213	400	putative membrane protein [Solanum tuber	0.972	0.972	0.592	1e-132
13785209	402	putative membrane protein [Solanum tuber	0.96	0.955	0.603	1e-132
225447614	394	PREDICTED: uncharacterized protein LOC10	0.957	0.972	0.593	1e-132
224129114	393	predicted protein [Populus trichocarpa]	0.955	0.972	0.584	1e-132
224064860	394	predicted protein [Populus trichocarpa]	0.982	0.997	0.582	1e-131
449453588	396	PREDICTED: uncharacterized protein LOC10	0.96	0.969	0.588	1e-129
449506899	396	PREDICTED: uncharacterized LOC101211761	0.96	0.969	0.588	1e-129

>gi|255582433|ref|XP_002532004.1| Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis] gi|223528335|gb|EEF30377.1| Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/391 (63%), Positives = 298/391 (76%), Gaps = 8/391 (2%)

Query: 4   KAIACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTV 63
           K++  ALF   +    +     QTCG   F++N++Y+TC+DLP L+SFLHWNY  S  T 
Sbjct: 3   KSLRAALFSCVLLMCLSVPSLAQTCGTFTFSSNQIYATCSDLPQLDSFLHWNYHPSNMTA 62

Query: 64  DLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGS 123
           D+AFR T T++S WV WALNP+GQ+M GSQ L+AF +STG P AYTT I + SPT+Q G+
Sbjct: 63  DIAFRRTGTTTSNWVVWALNPTGQQMQGSQALLAFHDSTGTPTAYTTSIDTMSPTMQRGN 122

Query: 124 LSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVG 183
           LSF V NI A    N+  IFATLQL  NL+STNQVWQ G M G T  +HAM   N  SVG
Sbjct: 123 LSFGVQNIRAEYSNNEMIIFATLQLNANLISTNQVWQVGTMTGTTFNSHAMDPANRASVG 182

Query: 184 TIDFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFY 243
           TI+F TG T AG   S+S++   N HGVLNAVSWG+L+PMG MIARY+KVFK ANPAWFY
Sbjct: 183 TINFATGTTVAGSAPSNSKK---NVHGVLNAVSWGILMPMGIMIARYVKVFKVANPAWFY 239

Query: 244 LHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPD 303
           LHVACQ+S Y+VGVAGWGTG+KLG+DSPGIKY KHRNIGI LF + TLQ+FAMLLRPKPD
Sbjct: 240 LHVACQSSAYVVGVAGWGTGLKLGSDSPGIKYEKHRNIGITLFCLATLQIFAMLLRPKPD 299

Query: 304 HKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAI 363
           HKYRLYWNIYH S+GY+ I+LSIIN++EG DILDPEKKWKRAY G+LIFLGA AA+LEA+
Sbjct: 300 HKYRLYWNIYHHSIGYATIILSIINVYEGLDILDPEKKWKRAYSGVLIFLGATAAVLEAV 359

Query: 364 TWVIVLKRKNGNSVKHHHSINGANGANGYGA 394
           TW+IV++RK   S   +      NG NGYGA
Sbjct: 360 TWLIVIRRKKTVSSDKY-----TNGTNGYGA 385

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13785207|emb|CAC37355.1| putative membrane protein [Solanum tuberosum]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 237/402 (58%), Positives = 292/402 (72%), Gaps = 5/402 (1%)

Query: 2   VNKAIACALFFS-FVAALFASSYAQ-QTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQS 59
           +NK +   LF S  ++ LF++SY Q Q C   AF NN++++TC  LP+LNS LHW+Y   
Sbjct: 1   MNKLLTTLLFSSILISTLFSTSYGQNQNCSAFAFRNNQIFATCNALPLLNSVLHWSYHPD 60

Query: 60  TNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTL 119
            +TVDLA+RH    ++ WVAW LN  G RM GSQCLVAF+NS+G   AYT+P+ S    L
Sbjct: 61  NHTVDLAYRHGGVPNTDWVAWGLNIDGTRMVGSQCLVAFRNSSGEIHAYTSPVSSYGTQL 120

Query: 120 QPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNA 179
             G+LSF VP I A    N++ IFATL+L     + NQ WQ G ++G    AH  SGDN 
Sbjct: 121 AEGALSFNVPRIGAEYSNNEFIIFATLELPAGRTNFNQAWQNGAVSGQALTAHVQSGDNM 180

Query: 180 RSVGTIDFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANP 239
           RS G++DF  G+   GG S  SR+RRRN HGVLNAVSWGVL+PMGA+ ARYLKVFK ANP
Sbjct: 181 RSFGSVDFANGELGGGGSSVTSRQRRRNVHGVLNAVSWGVLMPMGAVFARYLKVFKAANP 240

Query: 240 AWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLR 299
           AWFY+HVACQ S YIVGVAGWGTG+KLG+DS GI++  HRNIGI LF +GTLQ+FA+LLR
Sbjct: 241 AWFYIHVACQTSAYIVGVAGWGTGLKLGSDSTGIEFTTHRNIGITLFCLGTLQVFALLLR 300

Query: 300 PKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAAL 359
           PKPDHKYRLYWNIYH ++GY+VI L+I N+FEGFD L+ +K WKRAY G++I +GA+A L
Sbjct: 301 PKPDHKYRLYWNIYHHAVGYAVISLAIANVFEGFDALNGQKNWKRAYTGVIIAIGAIAVL 360

Query: 360 LEAITWVIVLKRKNGNSVKHHHSINGANG-ANGYGARTQQGA 400
           LEA TW IV+KRK  +S K  H+ NG NG  N YG  T Q A
Sbjct: 361 LEAFTWFIVIKRKKTDSNK--HTQNGTNGTVNPYGNGTHQQA 400

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13785211|emb|CAC37357.1| putative membrane protein [Solanum tuberosum]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/402 (58%), Positives = 292/402 (72%), Gaps = 5/402 (1%)

Query: 2   VNKAIACALFFS-FVAALFASSYAQ-QTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQS 59
           +NK +   LF S  ++ LF++SY Q Q C   AF NN++++TC  LP+LNS LHW+Y   
Sbjct: 1   MNKLLTTLLFSSILISTLFSTSYGQNQNCSAFAFRNNQIFATCNALPLLNSVLHWSYHPD 60

Query: 60  TNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTL 119
            +TVDLA+RH    ++ WVAW LN  G RM GSQCLVAF+NS+G   AYT+P+ S    L
Sbjct: 61  NHTVDLAYRHGGVPNTDWVAWGLNIDGTRMVGSQCLVAFRNSSGEIHAYTSPVSSYGTQL 120

Query: 120 QPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNA 179
             G+LSF VP I A    N++ IFATL+L     S NQ WQ G ++G    AH  SGDN 
Sbjct: 121 AKGALSFNVPRIGAEYSNNEFIIFATLELPAGRTSFNQAWQNGAVSGQALTAHVQSGDNM 180

Query: 180 RSVGTIDFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANP 239
           RS G+IDF  G+   GG S  SR+RRRN HGVLNAVSWGVL+PMGA+ ARYLKVFK ANP
Sbjct: 181 RSFGSIDFANGELGGGGSSVTSRQRRRNVHGVLNAVSWGVLMPMGAVFARYLKVFKAANP 240

Query: 240 AWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLR 299
           AWFY+HVACQ S YIVG+AGWGTG+KLG+DS GI++  HRNIGI LF +GTLQ+FA+LLR
Sbjct: 241 AWFYIHVACQTSAYIVGIAGWGTGLKLGSDSTGIEFTTHRNIGITLFCLGTLQVFALLLR 300

Query: 300 PKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAAL 359
           PKPDHKYRLYWNIYH ++GY+VI L+I N+F+GFD L+ +K WKRAY G++I +GA+A L
Sbjct: 301 PKPDHKYRLYWNIYHHAVGYAVISLAIANVFQGFDALNGQKNWKRAYTGVIIAIGAIAVL 360

Query: 360 LEAITWVIVLKRKNGNSVKHHHSINGANG-ANGYGARTQQGA 400
           LEA TW IV+KRK  ++ K  H+ NG NG  N YG  T Q A
Sbjct: 361 LEAFTWFIVIKRKKTDTNK--HTQNGTNGTVNPYGNGTHQQA 400

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13785213|emb|CAC37358.1| putative membrane protein [Solanum tuberosum]

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/395 (59%), Positives = 288/395 (72%), Gaps = 6/395 (1%)

Query: 10  LFFS--FVAALFASSYAQ-QTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLA 66
           L FS   ++ LF++SY Q Q C   AF NN++++TC  LP+LNS LHW+Y    +TVDLA
Sbjct: 8   LLFSSILISTLFSTSYGQNQNCSAFAFRNNQIFATCNALPLLNSVLHWSYHPDNHTVDLA 67

Query: 67  FRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSF 126
           +RH    ++ WVAW LN  G RM GSQCLVAF+NS+G   AYT+P+ S    L  G+LSF
Sbjct: 68  YRHGGVPNTDWVAWGLNIDGTRMVGSQCLVAFRNSSGEIHAYTSPVSSYGTQLAEGALSF 127

Query: 127 QVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTID 186
            VP I A    N++ IFATL+L     S NQ WQ G ++G    AH  SGDN RS G++D
Sbjct: 128 NVPRIGAEYSNNEFIIFATLELPAGRTSFNQAWQNGAVSGQALTAHVQSGDNMRSFGSVD 187

Query: 187 FRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHV 246
           F  G+   GG S  SR+RRRN HG+LNAVSWGVL+PMGA+ ARYLKVFK ANPAWFY+HV
Sbjct: 188 FANGELGGGGSSVTSRQRRRNVHGILNAVSWGVLMPMGAVFARYLKVFKAANPAWFYIHV 247

Query: 247 ACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKY 306
           ACQ S YIVGVAGWGTG+KLG+DS GI++  HRNIGI LF +GTLQ+FA+LLRPKPDHKY
Sbjct: 248 ACQTSAYIVGVAGWGTGLKLGSDSTGIEFTTHRNIGITLFCLGTLQVFALLLRPKPDHKY 307

Query: 307 RLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWV 366
           RLYWNIYH ++GY+VI L+I N+F+GFD L+ +K WKRAY G++I +GA+A LLEA TW 
Sbjct: 308 RLYWNIYHHAVGYAVISLAITNVFQGFDALNGQKNWKRAYTGVIIAIGAIAVLLEAFTWF 367

Query: 367 IVLKRKNGNSVKHHHSINGANG-ANGYGARTQQGA 400
           IV+KRK  +S K  H+ NG NG  N YG  T Q A
Sbjct: 368 IVIKRKKTDSNK--HTQNGTNGTVNPYGNGTHQQA 400

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13785209|emb|CAC37356.1| putative membrane protein [Solanum tuberosum]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/393 (60%), Positives = 286/393 (72%), Gaps = 9/393 (2%)

Query: 10  LFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRH 69
           LF S +  LF  SY Q  C    F NN ++STC  LPVLNSFLHW Y    +TVDLA+RH
Sbjct: 12  LFSSILLTLFTFSYGQN-CSTHQFTNNNLFSTCNPLPVLNSFLHWTYHPDNHTVDLAYRH 70

Query: 70  TTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVP 129
              + S WVAWALN  G  MAG Q L+AF+NS+G+  AYT+PI     TL  G+LSF VP
Sbjct: 71  GGVTESSWVAWALNLDGTGMAGCQSLIAFRNSSGQIHAYTSPIAGYGTTLTEGALSFGVP 130

Query: 130 NISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRT 189
            ISA    ++  IFATL+L  N  S  QVWQ G ++      H  SGDN RSVGT+DF +
Sbjct: 131 RISAEFVRSEMIIFATLELPINRTSFTQVWQNGQVSEQALRVHQTSGDNMRSVGTVDFAS 190

Query: 190 GQTTAGGG---SSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHV 246
           GQT+AG G   S+ +R+RRRN HGVLNAVSWGVL+PMGA+ ARYLKVFK+ANPAWFYLH 
Sbjct: 191 GQTSAGAGGGISASARQRRRNIHGVLNAVSWGVLMPMGAIFARYLKVFKSANPAWFYLHA 250

Query: 247 ACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKY 306
            CQ   Y VGVAGWGTG+KLG+DS GI+++ HRNIGI LF +GTLQ+FA+LLRPKPDHK+
Sbjct: 251 GCQTVAYAVGVAGWGTGLKLGSDSVGIRFDTHRNIGITLFCLGTLQVFALLLRPKPDHKF 310

Query: 307 RLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWV 366
           RLYWNIYH   GY+VI+LSIIN+FEGFD L+ +K WK+AYIG++IFLGA+A LLEAITW 
Sbjct: 311 RLYWNIYHHVTGYTVIILSIINVFEGFDALNGQKNWKKAYIGVIIFLGAIAVLLEAITWF 370

Query: 367 IVLKRKNGN-SVKHHHSINGANGANGYGARTQQ 398
           IV+KRK  + S K+ H     NG NGY +R+  
Sbjct: 371 IVIKRKKTSVSDKYPH----GNGTNGYASRSHD 399

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447614|ref|XP_002273270.1| PREDICTED: uncharacterized protein LOC100258038 [Vitis vinifera]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 232/391 (59%), Positives = 300/391 (76%), Gaps = 8/391 (2%)

Query: 6   IACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDL 65
           ++CAL    V+ L +SS   QTCG   F+NN +Y++CTDL  L SF+HW    +  T+++
Sbjct: 10  VSCAL----VSMLVSSS--AQTCGSYTFSNNNLYTSCTDLSELGSFIHWT-RHTNGTLEI 62

Query: 66  AFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLS 125
           A+R    SS+ W+AWA+N +   M G+Q LVA+ NS+  P AYT+P+ S S TL PGSLS
Sbjct: 63  AYRQPDFSSTNWIAWAINLNSTGMVGAQSLVAYVNSSA-PYAYTSPVSSYSTTLAPGSLS 121

Query: 126 FQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTI 185
           F VP I A     +  I+ATL+L+++L + NQVWQEGP++G TPG H+ +G++ +S+GT+
Sbjct: 122 FSVPKIEAENSNGEMIIYATLELSSSLTTVNQVWQEGPLSGGTPGTHSTTGEHVQSMGTL 181

Query: 186 DFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLH 245
           D  +GQT+ GG ++ SR RRRN HGVLN VSWG L+P+GAMIARY+KVF+ A+PAWFYLH
Sbjct: 182 DLLSGQTSTGGSATSSRVRRRNIHGVLNVVSWGTLMPLGAMIARYMKVFQAADPAWFYLH 241

Query: 246 VACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHK 305
           VACQ+SGYIVGVAGW TGIKLG+DS  ++Y+ HRN+GI LF +GTLQ+FA+LLRP  DHK
Sbjct: 242 VACQSSGYIVGVAGWATGIKLGSDSSTVQYDTHRNVGITLFCLGTLQLFALLLRPNKDHK 301

Query: 306 YRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITW 365
           YRLYWNIYH ++GY +I+LSI NIFEGFDILDPE+KWKRAYIGILIFLG  A +LEA TW
Sbjct: 302 YRLYWNIYHHAIGYCIIILSIFNIFEGFDILDPEEKWKRAYIGILIFLGFFAIMLEAATW 361

Query: 366 VIVLKRKNGNSVKHHHSINGANGANGYGART 396
            IV+KRK  +S K+  + NG NG NG+GART
Sbjct: 362 YIVIKRKRESSEKYPQNGNGVNGVNGHGART 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129114|ref|XP_002320504.1| predicted protein [Populus trichocarpa] gi|222861277|gb|EEE98819.1| predicted protein [Populus trichocarpa]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/395 (58%), Positives = 287/395 (72%), Gaps = 13/395 (3%)

Query: 7   ACALFFSFVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLA 66
           +CAL  S      A     QTCG   F+ N+ YSTC DLP L+  LHWNY  S  T D+A
Sbjct: 11  SCALLISLCVPSLA-----QTCGNYTFSGNRSYSTCNDLPQLSCSLHWNYHPSNLTADIA 65

Query: 67  FRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSF 126
           FR +  S+S W++WALNPS + MAGSQ LVA+Q+  G  +AYTT +   +P +QPG LSF
Sbjct: 66  FRKSGASTSNWISWALNPSRRAMAGSQALVAYQHPNGSILAYTTQLNK-NPNMQPGRLSF 124

Query: 127 QVPNISATLEGN-QWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTI 185
            VP+I+A    N    IFATLQLT++L  TNQVWQEGPMNG  PG H  +G N +S+GT+
Sbjct: 125 DVPSIAAEFSSNGDMIIFATLQLTDSLRLTNQVWQEGPMNGGNPGEHPTNGQNGKSMGTV 184

Query: 186 DFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLH 245
           DF  G +    G + S++R+RN HGVLNAVSWG+L+P+G +IARYLKVFK+A PAWFYLH
Sbjct: 185 DFING-SVTTTGGTTSKQRKRNVHGVLNAVSWGILMPVGIIIARYLKVFKSAGPAWFYLH 243

Query: 246 VACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHK 305
           V CQ SGY VG+AGW TGIKLG+DSPGI Y+ HRN+G+ +FA+GTLQ+ A+LLRPKPDHK
Sbjct: 244 VMCQTSGYAVGIAGWATGIKLGSDSPGISYDTHRNLGMIIFALGTLQVLALLLRPKPDHK 303

Query: 306 YRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITW 365
           YRLYWNIYH ++GY+ ++LSI NIFEGFD+LD E  WK+AY G+LIFL  VAA++EA+TW
Sbjct: 304 YRLYWNIYHHTIGYTTVILSIANIFEGFDVLDTEDNWKKAYTGVLIFLVVVAAIMEAVTW 363

Query: 366 VIVLKRKNGNSVKHHHSINGANGANGYGARTQQGA 400
            IV+KRK   S   H      NG N YG+R QQ A
Sbjct: 364 FIVIKRKKAASSDKH-----VNGENVYGSRAQQTA 393

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064860|ref|XP_002301587.1| predicted protein [Populus trichocarpa] gi|118486648|gb|ABK95161.1| unknown [Populus trichocarpa] gi|222843313|gb|EEE80860.1| predicted protein [Populus trichocarpa]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/400 (58%), Positives = 294/400 (73%), Gaps = 7/400 (1%)

Query: 2   VNKAIACALFFS-FVAALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQST 60
           ++K++   L FS F+      S   Q+CG  +F+N++ YS C DL  LN  LHW Y  S 
Sbjct: 1   MDKSLTTTLLFSCFLLISLPVSSLAQSCGNYSFSNSQEYSACNDLSQLNCSLHWTYHPSN 60

Query: 61  NTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQ 120
            T D+AFR T  S++ W+AWALNP+ Q MAGSQ LVA+Q S      YTT +   S ++Q
Sbjct: 61  MTADIAFRKTGASTTNWIAWALNPTRQGMAGSQALVAYQQSNSTMRFYTTQV-DASGSMQ 119

Query: 121 PGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNAR 180
           P SLSF V NISA   G    IFATLQL+ +L+STNQVWQEGP++G +P  H+ +G N +
Sbjct: 120 PASLSFGVRNISAEYTGRDMIIFATLQLSASLVSTNQVWQEGPLSGGSPSPHSTTGPNMQ 179

Query: 181 SVGTIDFRTGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPA 240
           SVGT++F +G  T+ GG + S+ R+RN HGVLNAVSWG+L+P+G +IARYLKVFK+A PA
Sbjct: 180 SVGTVNFVSGTATSTGGGTSSKARKRNVHGVLNAVSWGILMPVGIIIARYLKVFKSAGPA 239

Query: 241 WFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRP 300
           WFYLH  CQ SGY VGVAGW TGIKLG+DSPGI YN HR +GI +FA+GTLQ+ A+LLRP
Sbjct: 240 WFYLHAICQTSGYAVGVAGWATGIKLGSDSPGITYNTHRKLGITIFALGTLQVLALLLRP 299

Query: 301 KPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALL 360
           KPDHKYRLYWNIYH ++GY+ ++LSI+NIFEGF+ LD EK WK+AYIG+LIFLG+VA +L
Sbjct: 300 KPDHKYRLYWNIYHHTIGYTTVILSIVNIFEGFEALDREKNWKKAYIGVLIFLGSVAVVL 359

Query: 361 EAITWVIVLKRKNGNSVKHHHSINGANGANGYGARTQQGA 400
           EA+TW+IV+KRK   S   H      NG NGYG+R QQ A
Sbjct: 360 EAVTWLIVIKRKKTASSDKH-----VNGVNGYGSRVQQTA 394

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453588|ref|XP_004144538.1| PREDICTED: uncharacterized protein LOC101211761 [Cucumis sativus]

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/389 (58%), Positives = 284/389 (73%), Gaps = 5/389 (1%)

Query: 11  FFSFVA--ALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFR 68
           FFS +   +L  S+ AQ       F NN+V++ C D PVLNSFLHW   QS NT+ +AFR
Sbjct: 8   FFSVLILFSLCLSASAQTCRSYNGFTNNEVFAACVDHPVLNSFLHWTLIQSNNTLRIAFR 67

Query: 69  HTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQV 128
              T  ++W+AWA+N     M GSQ LVA++NS+G   AYT+ + S +PTLQ  S+SFQV
Sbjct: 68  RPNTGPNQWIAWAINRQRLNMFGSQALVAYRNSSGIAHAYTSDVNSPTPTLQESSISFQV 127

Query: 129 PNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFR 188
           P + AT    + TIFAT+ L +N  + NQVWQEGP+ G +P +HA++  N  S  T+D  
Sbjct: 128 PQLRATYVNQEMTIFATIILGDNETTINQVWQEGPLAGGSPASHAITDANRASRTTLDLL 187

Query: 189 TGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVAC 248
           TG +TA   ++D   ++RNTHGVLNAVSWG ++PMGA+ ARYLKVFK A+PAWFYLHV C
Sbjct: 188 TGSSTA---AADDVLKKRNTHGVLNAVSWGTMMPMGAIFARYLKVFKGADPAWFYLHVGC 244

Query: 249 QASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRL 308
           QAS Y VGVAGW TGIKLG+DS GI+YN HRNIGI LF  GTLQ+FA+LLRP  DHKYR+
Sbjct: 245 QASAYAVGVAGWATGIKLGSDSLGIEYNTHRNIGITLFVFGTLQVFALLLRPNKDHKYRI 304

Query: 309 YWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIV 368
           YWNIYH S+GYSVIVLSIIN+F+G DIL+P+ KWKRAY GILIFLGAVA +LE ITW+I 
Sbjct: 305 YWNIYHHSIGYSVIVLSIINVFKGLDILNPDGKWKRAYTGILIFLGAVAVVLEVITWIIC 364

Query: 369 LKRKNGNSVKHHHSINGANGANGYGARTQ 397
           +KRK  NS K  H++NG NG NG   R +
Sbjct: 365 IKRKRSNSDKFPHNVNGVNGINGNATREE 393

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506899|ref|XP_004162878.1| PREDICTED: uncharacterized LOC101211761 [Cucumis sativus]

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/389 (58%), Positives = 284/389 (73%), Gaps = 5/389 (1%)

Query: 11  FFSFVA--ALFASSYAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFR 68
           FFS +   +L  S+ AQ       F NN+V++ C D PVLNSFLHW   QS NT+ +AFR
Sbjct: 8   FFSVLILFSLCLSASAQTCRSYNGFTNNEVFAACVDHPVLNSFLHWTLIQSNNTLRIAFR 67

Query: 69  HTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQV 128
              T  ++W+AWA+N     M GSQ LVA++NS+G   AYT+ + S +PTLQ  S+SFQV
Sbjct: 68  RPNTGPNQWIAWAINRQRLNMFGSQALVAYRNSSGIAHAYTSDVNSPTPTLQESSISFQV 127

Query: 129 PNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDFR 188
           P + AT    + TIFAT+ L +N  + NQVWQEGP+ G +P +HA++  N  S  T+D  
Sbjct: 128 PQLRATYVNQEMTIFATIILGDNETTINQVWQEGPLAGGSPASHAITDANRASRTTLDLL 187

Query: 189 TGQTTAGGGSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVAC 248
           TG +TA   ++D   ++RNTHGVLNAVSWG ++PMGA+ ARYLKVFK A+PAWFYLHV C
Sbjct: 188 TGSSTA---AADDVLKKRNTHGVLNAVSWGTMMPMGAIFARYLKVFKGADPAWFYLHVGC 244

Query: 249 QASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRL 308
           QAS Y VGVAGW TGIKLG+DS GI+YN HRNIGI LF  GTLQ+FA+LLRP  DHKYR+
Sbjct: 245 QASAYAVGVAGWATGIKLGSDSLGIEYNTHRNIGITLFVFGTLQVFALLLRPNKDHKYRI 304

Query: 309 YWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIV 368
           YWNIYH S+GYSVIVLSIIN+F+G DIL+P+ KWKRAY GILIFLGAVA +LE ITW+I 
Sbjct: 305 YWNIYHHSIGYSVIVLSIINVFKGLDILNPDGKWKRAYTGILIFLGAVAVVLEVITWIIC 364

Query: 369 LKRKNGNSVKHHHSINGANGANGYGARTQ 397
           +KRK  NS K  H++NG NG NG   R +
Sbjct: 365 IKRKRSNSDKFPHNVNGVNGINGNATREE 393

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
TAIR|locus:505006660	404	AT5G35735 "AT5G35735" [Arabido	0.877	0.868	0.570	4.8e-110
TAIR|locus:2130789	402	AT4G17280 [Arabidopsis thalian	0.867	0.863	0.501	2.1e-100
TAIR|locus:2168948	395	AT5G47530 [Arabidopsis thalian	0.865	0.875	0.495	1.5e-99
TAIR|locus:2090240	393	AT3G25290 "AT3G25290" [Arabido	0.88	0.895	0.479	3.6e-89
TAIR|locus:2123271	394	AT4G12980 "AT4G12980" [Arabido	0.872	0.885	0.483	2.6e-86
TAIR|locus:2077690	466	AT3G59070 [Arabidopsis thalian	0.85	0.729	0.430	3.8e-78
TAIR|locus:2049254	404	AT2G04850 [Arabidopsis thalian	0.85	0.841	0.327	2.1e-52
TAIR|locus:2156559	255	AT5G48750 [Arabidopsis thalian	0.55	0.862	0.409	4.2e-47
TAIR|locus:2091097	369	AT3G07570 [Arabidopsis thalian	0.812	0.880	0.281	2.6e-31
TAIR|locus:2076770	398	AT3G61750 [Arabidopsis thalian	0.422	0.424	0.35	4.9e-22

TAIR|locus:505006660 AT5G35735 "AT5G35735" [Arabidopsis thaliana (taxid:3702)]

 Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
 Identities = 203/356 (57%), Positives = 248/356 (69%)

Query:    25 QQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNP 84
             Q  C    F NN  ++ C+DL  L SFLHW Y++   TV +A+RH  TS+S WVAW LNP
Sbjct:    26 QSLCNTHRFTNNLAFADCSDLSALGSFLHWTYNEQNGTVSIAYRHPGTSASSWVAWGLNP 85

Query:    85 SGQRMAGSQCLVAFQNSTGRPV-AYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIF 143
             S  +M G+Q LVAF N+T     AYT+ + S    L+  SLSF V  +SATL   + TIF
Sbjct:    86 SSTQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFGVSGLSATLVSGEVTIF 145

Query:   144 AXXXXXXXXXXXXXVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQTTAXXXXXXXXX 203
             A             +WQ GP+    P +H  SGDN RS G IDFRTGQ +A         
Sbjct:   146 ATLELSPNLITANQLWQVGPVVNGVPASHQTSGDNMRSSGRIDFRTGQASAGGGGSGDRL 205

Query:   204 XXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTG 263
                NTHGVLNAVSWGVL+PMGAM+ARY+KVF  A+P WFYLH+A Q SGY++GVAGW TG
Sbjct:   206 RKRNTHGVLNAVSWGVLMPMGAMMARYMKVF--ADPTWFYLHIAFQVSGYVIGVAGWATG 263

Query:   264 IKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIV 323
             IKLGNDSPG  Y+ HRN+GIALF   TLQ+FA+L+RPKPDHKYR YWN+YH ++GY+ I+
Sbjct:   264 IKLGNDSPGTSYSTHRNLGIALFTFATLQVFALLVRPKPDHKYRTYWNVYHHTVGYTTII 323

Query:   324 LSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKN--GNSV 377
             LSI+NIF+GFDILDPE KW+ AYIGILIFLGA   +LE +TW IVL+RK+  GN+V
Sbjct:   324 LSIVNIFKGFDILDPEDKWRWAYIGILIFLGACVLILEPLTWFIVLRRKSRGGNTV 379

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2130789 AT4G17280 [Arabidopsis thaliana (taxid:3702)]

 Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
 Identities = 176/351 (50%), Positives = 246/351 (70%)

Query:    26 QTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPS 85
             QTC +  F++N V+ +C DLP L+SFLH+ Y+ ST ++ +A+RHT  +S +WVAWA+NP+
Sbjct:    32 QTCSKYKFSSNNVFDSCNDLPFLDSFLHYTYESSTGSLHIAYRHTKLTSGKWVAWAVNPT 91

Query:    86 GQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFAX 145
                M G+Q +VA+  S G    YT+PI S   +L  G LSF V  +SAT + N+  + A 
Sbjct:    92 STGMVGAQAIVAYPQSDGTVRVYTSPIRSYQTSLLEGDLSFNVSGLSATYQNNEIVVLAS 151

Query:   146 XXXXXXXX---XXXXVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQTTAXXXXXXXX 202
                            VWQ+G M+G++   H  SG+N RSV T++  +G + A        
Sbjct:   152 LKLAQDLGNGGTINTVWQDGSMSGNSLLPHPTSGNNVRSVSTLNLVSGVSAAAGGAGGSS 211

Query:   203 XXXX-NTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWG 261
                  N HG+LN VSWG+++P+GA+IARYL+V K+A+PAWFY+HV CQAS YI+GVAGW 
Sbjct:   212 KLRKRNIHGILNGVSWGIMMPLGAIIARYLRVAKSADPAWFYIHVFCQASAYIIGVAGWA 271

Query:   262 TGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSV 321
             TG+KLG DSPGI+Y+ HR IGIALF++ T+Q+FAM LRPKP+HK+RLYWNIYH ++GY++
Sbjct:   272 TGLKLGGDSPGIQYSTHRAIGIALFSLATVQVFAMFLRPKPEHKHRLYWNIYHHTIGYTI 331

Query:   322 IVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRK 372
             I+L ++N+F+G  IL P+K+WK AYIGI++ L  VA LLEA TW +V+KR+
Sbjct:   332 IILGVVNVFKGLGILSPKKQWKNAYIGIIVVLAIVATLLEAFTWYVVIKRR 382

GO:0005576 "extracellular region" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2168948 AT5G47530 [Arabidopsis thaliana (taxid:3702)]

 Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
 Identities = 173/349 (49%), Positives = 242/349 (69%)

Query:    26 QTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPS 85
             Q C    F+ N+++ +C DLPVL+SFLH+ YD S+  + +A+RHT  +  +WVAWA+NP+
Sbjct:    25 QKCSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSGNLQIAYRHTKLTPGKWVAWAVNPT 84

Query:    86 GQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFAX 145
                M G+Q +VA+  S G   AYT+PI S   +L    LSF V  +SAT + N+  I+A 
Sbjct:    85 STGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQLSATYQNNEMVIYAI 144

Query:   146 XXX-XXXXXXXXXVWQEGPMNGDTPGAHAMSGDNARSVGTIDFRTGQT--TAXXXXXXXX 202
                          VWQ+G ++G+ P  H  SG+N RSV T++  +G +  T+        
Sbjct:   145 LNLPLANGGIINTVWQDGSLSGNNPLPHPTSGNNVRSVSTLNLVSGASGSTSTGAGGASK 204

Query:   203 XXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGT 262
                 N HG+LN VSWG+++P+GA+IARYLKV K+A+PAWFYLHV CQ+S YI+GVAGW T
Sbjct:   205 LRKRNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVFCQSSAYIIGVAGWAT 264

Query:   263 GIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVI 322
             G+KLGN+S GI++  HR +GIALF + T+Q+FAM LRPKP+HKYR+YWNIYH ++GYSVI
Sbjct:   265 GLKLGNESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYRVYWNIYHHTVGYSVI 324

Query:   323 VLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKR 371
             +L+++N+F+G DIL PEK+W+ AY  I++ LG VA +LE  TW +V+KR
Sbjct:   325 ILAVVNVFKGLDILSPEKQWRNAYTAIIVVLGIVAVVLEGFTWYVVIKR 373

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2090240 AT3G25290 "AT3G25290" [Arabidopsis thaliana (taxid:3702)]

 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 175/365 (47%), Positives = 231/365 (63%)

Query:    26 QTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPS 85
             QTC  Q F+ +K Y  C DLP L +FLH++YD S  T+ + F         W+AWA+NP 
Sbjct:    26 QTCKSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFSAPPAKPGGWIAWAINPK 85

Query:    86 GQRMAGSQCLVAFQN-STGRPVAYTTPIGSGSPTLQPGSLSFQVPNISA---TLEGNQWT 141
                M GSQ LVA+++   G  V  T  I S S +L P  L+F V ++ A     +G    
Sbjct:    86 ATGMVGSQTLVAYKDPGNGVAVVKTLNISSYS-SLIPSKLAFDVWDMKAEEAARDGGSLR 144

Query:   142 IFAXX---XXXXXXXXXXXVWQEGPM--NGDTPGAHAMSGDNARSVGTIDFR---TGQTT 193
             IFA                VWQ GP    G   G HA    N  S+ ++D +   +G T 
Sbjct:   145 IFARVKVPADLVAKGKVNQVWQVGPELGPGGMIGRHAFDSANLASMSSLDLKGDNSGGTI 204

Query:   194 AXXXXXXXXXXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGY 253
             +            N HG+LNAVSWG+L P+GA+IARY++VF +A+PAWFYLHV+CQ S Y
Sbjct:   205 SGGDEVNAKIKNRNIHGILNAVSWGILFPIGAIIARYMRVFDSADPAWFYLHVSCQFSAY 264

Query:   254 IVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIY 313
             ++GVAGW TG+KLGN+S GI+++ HRNIGIALF + T+QMFAMLLRPK DHKYR YWNIY
Sbjct:   265 VIGVAGWATGLKLGNESEGIRFSAHRNIGIALFTLATIQMFAMLLRPKKDHKYRFYWNIY 324

Query:   314 HWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKN 373
             H  +GY+++ L IIN+F+G +IL P+  +K AYI ++  LG +A LLEAITWV+VLKRK+
Sbjct:   325 HHGVGYAILTLGIINVFKGLNILKPQDTYKTAYIAVIAVLGGIALLLEAITWVVVLKRKS 384

Query:   374 GNSVK 378
              NS+K
Sbjct:   385 NNSMK 389

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2123271 AT4G12980 "AT4G12980" [Arabidopsis thaliana (taxid:3702)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 177/366 (48%), Positives = 229/366 (62%)

Query:    27 TCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSG 86
             +C  Q F+  K Y  C DLP L + LH++YD S  T+ + F    +    W+AWA+NP  
Sbjct:    28 SCSSQTFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVVFSAPPSKPGGWIAWAINPKS 87

Query:    87 QRMAGSQCLVAFQN-STGRPVAYTTPIGSGSPTLQPGSLSFQVPNISA---TLEGNQWTI 142
               MAGSQ LVA ++ STG     T  I S S +L P  LSF V ++ A     +G    I
Sbjct:    88 TGMAGSQALVASKDPSTGVASVTTLNIVSYS-SLVPSKLSFDVWDVKAEEAANDGGALRI 146

Query:   143 FAXX---XXXXXXXXXXXVWQEGP--MNGDTPGAHAMSGDNARSVGTIDFRTGQT----- 192
             FA                VWQ GP   NG    AH  SG N  SVG++D  TG T     
Sbjct:   147 FAKVKVPADLAASGKVNQVWQVGPGVSNGRIQ-AHDFSGPNLNSVGSLDL-TGTTPGVPV 204

Query:   193 TAXXXXXXXXXXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASG 252
             +             N HG+LNAVSWG+L P+GAMIARY+++F++A+PAWFYLHV+CQ S 
Sbjct:   205 SGGGGAGNSRIHKRNIHGILNAVSWGLLFPIGAMIARYMRIFESADPAWFYLHVSCQFSA 264

Query:   253 YIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNI 312
             Y++GVAGW TG+KLG++S GI+YN HRNIGI LF+I TLQMFAMLLRP+ DHK+R  WNI
Sbjct:   265 YVIGVAGWATGLKLGSESKGIQYNTHRNIGICLFSIATLQMFAMLLRPRKDHKFRFVWNI 324

Query:   313 YHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRK 372
             YH  +GYS+++L IIN+F+G  IL+P+  +K AYI ++  LG +  LLE +TWVIVLKRK
Sbjct:   325 YHHGVGYSILILGIINVFKGLSILNPKHTYKTAYIAVIGTLGGITLLLEVVTWVIVLKRK 384

Query:   373 NGNSVK 378
             +  S K
Sbjct:   385 SAKSTK 390

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2077690 AT3G59070 [Arabidopsis thaliana (taxid:3702)]

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 148/344 (43%), Positives = 211/344 (61%)

Query:    23 YAQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWAL 82
             +A+  C   +FNN K + +CTDL VLNS+LH+NY Q T  +++A+ H+   SS W++WA+
Sbjct:    32 HARSRCESYSFNNGKSFRSCTDLLVLNSYLHFNYAQETGVLEIAYHHSNLESSSWISWAI 91

Query:    83 NPSGQRMAGSQCLVAFQNST-GRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWT 141
             NP+ + M G+Q LVA++NST G   AYT+ I S SP LQ   LS +V  +SA     +  
Sbjct:    92 NPTSKGMVGAQALVAYRNSTSGVMRAYTSSINSYSPMLQESPLSLRVTQVSAEYSNGEMM 151

Query:   142 IFAXXXXXXXXXXXXXVWQEGPMN-GDTPGAHAMSGDNARSVGTIDFRTGQTTAXXXXXX 200
             IFA             +WQ+GP+  GD  G HAMSGDN +S+ ++D  +GQ T       
Sbjct:   152 IFATLVLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLLSGQVTTTKSVNR 211

Query:   201 XXXXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVG-VAG 259
                     H ++NA+SWG+L+P+G M ARY+K ++  +P WFY+HV CQ +GY  G + G
Sbjct:   212 NMLLVKQIHAIVNALSWGILMPIGVMAARYMKNYEVLDPTWFYIHVVCQTTGYFSGLIGG 271

Query:   260 WGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGY 319
              GT I +   + G++   H  IG+ LFA+G LQ+ ++  RP  DHKYR YWN YH ++GY
Sbjct:   272 LGTAIYMARHT-GMRTTLHTVIGLLLFALGFLQILSLKARPNKDHKYRKYWNWYHHTMGY 330

Query:   320 SVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAI 363
              VIVLSI NI++G  IL P   WK AY  I+  + A A ++E +
Sbjct:   331 IVIVLSIYNIYKGLSILQPGSIWKIAYTTIICCIAAFAVVMEIL 374

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2049254 AT2G04850 [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 118/360 (32%), Positives = 179/360 (49%)

Query:    37 KVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNP-SGQRMAGSQCL 95
             K +  C  LP   + + W Y     T+DL F  T  S S WV W +NP S  +M GS+ L
Sbjct:    32 KSFEKCISLPTQQASIAWTYHPHNATLDLCFFGTFISPSGWVGWGINPDSPAQMTGSRVL 91

Query:    96 VAFQNSTGRPVAYTTPIGSGSPTLQPGSLS------FQVPNISATLEGNQWT-------- 141
             +AF +     +     +   S  LQ G L        ++ + SA+L G +          
Sbjct:    92 IAFPDPNSGQLILLPYVLDSSVKLQKGPLLSRPLDLVRLSSSSASLYGGKMATIRNGASV 151

Query:   142 -IFAXXXXXXXXXXXXXVWQEGP-MNGDTPGAHAMSGDNARSVGTIDFRTGQTTAXXXXX 199
              I+A             VW  G  + G +P  H  +  +  S  T D  +G  T      
Sbjct:   152 QIYASVKLSSNNTKIHHVWNRGLYVQGYSPTIHPTTSTDLSSFSTFDVTSGFATVNQNSG 211

Query:   200 XXXXXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAG 259
                     THGV+NA+SWG L+P GA+ ARYL+  ++  P WFY+H A Q +G+++G  G
Sbjct:   212 SRALKV--THGVVNAISWGFLLPAGAVTARYLRQMQSIGPTWFYIHAAIQLTGFLLGTIG 269

Query:   260 WGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGY 319
             +  GI LG++SPG+ Y  HR++GIA F    LQ  A+L RPK  +K+R YW  YH  +GY
Sbjct:   270 FSIGIVLGHNSPGVTYGLHRSLGIATFTAAALQTLALLFRPKTTNKFRRYWKSYHHFVGY 329

Query:   320 SVIVLSIINIFEGFDILDPEKKW-KRAYIGILIFLGAVAALLEAITWVIVLKRKNGNSVK 378
             + +V+ ++N+F+GF++L   + + K  Y   L  L  V   +E  +WV+  ++     +K
Sbjct:   330 ACVVMGVVNVFQGFEVLREGRSYAKLGYCLCLSTLVGVCVAMEVNSWVVFCRKAKEEKMK 389

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2156559 AT5G48750 [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 91/222 (40%), Positives = 134/222 (60%)

Query:    25 QQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNP 84
             Q +C    FNN K + +C DLPVL+SFLH++Y + T  +++A+RHT   SS W+AW +NP
Sbjct:    31 QVSCDSHNFNNGKHFRSCVDLPVLDSFLHYSYVRETGVLEVAYRHTNIESSSWIAWGINP 90

Query:    85 SGQRMAGSQCLVAFQNST-GRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIF 143
             + + M G+Q L+A++NST G   AYT+ I   +P LQ G LSF+V  +SA     + TIF
Sbjct:    91 TSKGMIGAQTLLAYRNSTSGFMRAYTSSINGYTPMLQEGPLSFRVTQLSAEYLNREMTIF 150

Query:   144 AXXXXXXXXXXXXXVWQEGPMN-GDTPGAHAMSGDNARSVGTIDFRTGQTTAXXXXXXXX 202
             A             +WQ+GP+  GD  G HAMSG++ +S+  +D  +GQ           
Sbjct:   151 ATMVWPSNTTVVNHLWQDGPLKEGDRLGMHAMSGNHLKSMANLDLLSGQVMTTKAANDNM 210

Query:   203 XXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYL 244
                 + HG++NAV WG+ IP+G M ARY++ +K  +P WFY+
Sbjct:   211 LLVKSIHGLVNAVCWGIFIPIGVMAARYMRTYKGLDPTWFYI 252

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0030198 "extracellular matrix organization" evidence=ISS

TAIR|locus:2091097 AT3G07570 [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 97/345 (28%), Positives = 158/345 (45%)

Query:    24 AQQTCGRQAFNNNKVYST----CTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVA 79
             A  +C      N+  ++T    CT+     +F+      + NT   +F  +   SS ++ 
Sbjct:    26 ATDSCNSTLPLNDLTFNTSLLQCTEAWTPQNFILRYARTAENT--WSFILSAPDSSAFIG 83

Query:    80 WALNPSGQRMAGSQCLVAFQNSTGRPVAYTTP--IGSGSP-TLQPGSLSFQVPNISATLE 136
                + +GQ M GS  +V +  S G       P  +G  SP  + P      + N S  +E
Sbjct:    84 IGFSTNGQ-MIGSSAIVGWIPSDGGS-GTVKPYLLGGKSPGEVNPDQGDLTIVNGSLKIE 141

Query:   137 GNQWTIFAXXXXXXXXXXXXXVWQEGPMNGDTPGAHAMSGDNARSVGT--IDFRTGQTTA 194
                  ++              ++  GP  G  P +        R V T  I++ TG  + 
Sbjct:   142 SVSSRLYMRFQLTATLPRQSLLYAVGPA-GFFPSSPDFRLREHRFVTTTTINYNTGSQSV 200

Query:   195 XXXXXXXXXXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYI 254
                          THG++N   WG+LI +GA++AR++K +   +P WFY H+A Q +G++
Sbjct:   201 VKVSPHSKLK--KTHGLMNMFGWGILIIVGAIVARHMKQW---DPTWFYAHIALQTTGFL 255

Query:   255 VGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYH 314
             +G+ G   G+ L N       +KH+ +GI +  +G LQM A+L RP    KYR YWN YH
Sbjct:   256 LGLTGVICGLVLENRLKANNVSKHKGLGITILVMGVLQMLALLARPDKQSKYRKYWNWYH 315

Query:   315 WSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAAL 359
              ++G  +I+L+I NIF G  +      W   Y G  + + A+ A+
Sbjct:   316 HNIGRLLIILAISNIFYGIHLAKAGTSWNGGY-GFAVAVLALTAI 359

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2076770 AT3G61750 [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 4.9e-22, P = 4.9e-22
 Identities = 63/180 (35%), Positives = 93/180 (51%)

Query:   185 IDFRTGQTTAXXXXXXXXXXXXNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYL 244
             +DF   + +               HGV+  + WG L+P+GA++ARYL+  K  +P W+YL
Sbjct:   198 VDF--SKASGATSIKTTTSTEKTKHGVMAILGWGFLLPVGAILARYLR-HK--DPLWYYL 252

Query:   245 HVACQASGYIVGVAGWGTGIKLGND-SPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPD 303
             H+  Q +G+I G+A    GI+L N   P I    HR IGI L  + TLQ+ A   RP+ +
Sbjct:   253 HIGFQFTGFIFGLAAVILGIQLYNRIQPDIP--AHRGIGIFLLVLSTLQVLAFFARPQKE 310

Query:   304 HKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKK-WKRAYIGILIFLGAVA-ALLE 361
              K R YWN YH  +G   +    +NI  G  + D     WK  Y G ++ +  +A  +LE
Sbjct:   311 TKMRRYWNWYHHWIGRISLFFGAVNIVLGIRMADNGGDGWKIGY-GFVLSVTLLAFVVLE 369

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	400
cd09629	152	cd09629, DOMON_CIL1_like, DOMON-like domain of Bra	4e-67
cd08760	191	cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrom	9e-55
smart00665	129	smart00665, B561, Cytochrome b-561 / ferric reduct	4e-37
pfam04526	101	pfam04526, DUF568, Protein of unknown function (DU	6e-35
smart00664	148	smart00664, DoH, Possible catecholamine-binding do	6e-13
pfam03699	771	pfam03699, UPF0182, Uncharacterized protein family	0.001

>gnl|CDD|187687 cd09629, DOMON_CIL1_like, DOMON-like domain of Brassica carinata CIL1 and similar proteins

 Score =  209 bits (534), Expect = 4e-67
 Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 1/152 (0%)

Query: 39  YSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAF 98
           ++ C DLP L + LHW Y+ S +T+D+AFR T  SSS WVAW +NP+G  M G+Q LVAF
Sbjct: 1   FAACNDLPTLGASLHWTYNASNSTLDVAFRATPPSSSGWVAWGINPTGTGMVGTQALVAF 60

Query: 99  QNSTGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQV 158
           +NS G  + YT  I S +   +P  LSF V ++SA   G + TIFATL+L +NL S N V
Sbjct: 61  RNSNGSVLVYTYNITSYTKLGEPLPLSFDVSDLSAEYSGGEMTIFATLKLPSNLTSVNHV 120

Query: 159 WQEGPM-NGDTPGAHAMSGDNARSVGTIDFRT 189
           WQ GP   G +PG H  SG N  S GT+D  T
Sbjct: 121 WQVGPAVTGGSPGPHPTSGANLASKGTLDLLT 152

Brassica carinata CIL1 has been described as involved in suppression of axillary meristem development. It contains a single DOMON domain, the function of which is unclear. Members in this diverse family of plant proteins may have a cytochrome b561 domain C-terminal to the DOMON domain, some members from Arabidopsis have been characterized as auxin-responsive or auxin-induced proteins. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases. Length = 152

>gnl|CDD|176490 cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrome b(561), including the FRRS1 gene product

 Score =  179 bits (455), Expect = 9e-55
 Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 13/194 (6%)

Query: 179 ARSVGTIDFRTGQTTAGGG--------SSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARY 230
           ++S  ++D  +G +++GG         S  S       HGVL A++WG+L+P+GA++ARY
Sbjct: 1   SKSSYSLDLASGTSSSGGSPFLLPNGSSVGSSDTLIKAHGVLMAIAWGILMPIGALLARY 60

Query: 231 LKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGT 290
              F   +P WFYLH   Q    ++ +AG+  GI L     G   N H  +GI + A+  
Sbjct: 61  ---FLLGDPVWFYLHAGLQLLAVLLAIAGFVLGIVLVQGGGGSLNNAHAILGIIVLALAI 117

Query: 291 LQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPE--KKWKRAYIG 348
           LQ    LLRP P  K R  WN  H  LG + ++L+I+NIF G D+      K WK AY  
Sbjct: 118 LQPLLGLLRPHPGSKKRSIWNWAHRWLGRAALILAIVNIFLGLDLAGAGTPKAWKIAYGV 177

Query: 349 ILIFLGAVAALLEA 362
           ++  L  V  +LE 
Sbjct: 178 VVAVLALVYLILEI 191

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 191

>gnl|CDD|214769 smart00665, B561, Cytochrome b-561 / ferric reductase transmembrane domain

 Score =  130 bits (330), Expect = 4e-37
 Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 5/130 (3%)

Query: 208 THGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLG 267
            H VL  + +G L+    ++AR L     + P WF LHV  Q    ++GV G        
Sbjct: 1   LHPVLMILGFGFLMGEAILVARPL-TRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISH 59

Query: 268 NDSPG-IKYNKHRNIGIALFAIGTLQMFAMLLRPKPD---HKYRLYWNIYHWSLGYSVIV 323
           N+S     Y+ H  +G+A F +  LQ  +  LRP P     KYR Y N YH  +G +  +
Sbjct: 60  NESGIANFYSLHSWLGLAAFVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFI 119

Query: 324 LSIINIFEGF 333
           L+I+ IF G 
Sbjct: 120 LAIVTIFLGL 129

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders. Length = 129

>gnl|CDD|191019 pfam04526, DUF568, Protein of unknown function (DUF568)

 Score =  124 bits (313), Expect = 6e-35
 Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 2/101 (1%)

Query: 89  MAGSQCLVAFQNS-TGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQ 147
           M GSQ LVAF++S +G    YT+ I S S +LQ G LSF VP++SA     + TIFATL+
Sbjct: 1   MVGSQALVAFRDSSSGAVRVYTSNISSYSTSLQEGPLSFDVPDLSAEESNGEVTIFATLK 60

Query: 148 LTNNLLSTNQVWQEGPM-NGDTPGAHAMSGDNARSVGTIDF 187
           L  N    NQVWQ GP+  G +PG H  SGDN RS+GT+D 
Sbjct: 61  LPANTTKVNQVWQVGPVVTGGSPGIHPTSGDNLRSMGTLDL 101

Family of uncharacterized plant proteins. Length = 101

>gnl|CDD|214768 smart00664, DoH, Possible catecholamine-binding domain present in a variety of eukaryotic proteins

 Score = 65.5 bits (160), Expect = 6e-13
 Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 16/154 (10%)

Query: 48  LNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVA 107
            + FL W+ D   N++       T S++ WVA   +P GQ MAG+  +VA+ ++ GR   
Sbjct: 2   CDYFLSWSVD-GENSIAFELSGPT-STNGWVAIGFSPDGQ-MAGADVVVAWVDNNGRVTV 58

Query: 108 YTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNL--------LSTNQVW 159
                    P ++          +SAT E    T     +L +N          + + +W
Sbjct: 59  KDYYTPGYGPPVEDDQQDVTD-LLSATYENGVLTCRFRRKLGSNDPDDKSLLDGTVHVLW 117

Query: 160 QEGPMNGDT-PGAHAMSGDNARSVGTIDFRTGQT 192
            +GP++ +   G H  S    +S   +   +   
Sbjct: 118 AKGPLSPNGGLGYHDFSL---KSTKKVCLSSCTG 148

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press). Length = 148

>gnl|CDD|217678 pfam03699, UPF0182, Uncharacterized protein family (UPF0182)

 Score = 41.0 bits (97), Expect = 0.001
 Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 18/100 (18%)

Query: 283 IALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDP---- 338
           I LF +  L  F  L              +       +      ++  +  D L      
Sbjct: 49  IGLFLLVFLIFFLFLF-------------LNLLLAYRARPPFVPLSPEQFGDPLARYRSV 95

Query: 339 -EKKWKRAYIGILIFLGAVAALLEAITWVIVLKRKNGNSV 377
              + +   +GI + LG +A L  +  W  VL   N    
Sbjct: 96  ILPRRRLLLLGISLVLGLLAGLSASSRWETVLLFLNAVPF 135

This family contains uncharacterized integral membrane proteins. Length = 771

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	400
KOG4293	403	consensus Predicted membrane protein, contains DoH	100.0
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	99.97
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	99.92
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	99.88
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	99.86
smart00664	148	DoH Possible catecholamine-binding domain present	99.85
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	99.82
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	99.82
PLN02810	231	carbon-monoxide oxygenase	99.8
PLN02351	242	cytochromes b561 family protein	99.79
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	99.78
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	99.78
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	99.77
PF03351	124	DOMON: DOMON domain; InterPro: IPR005018 The DOMON	99.76
PLN02680	232	carbon-monoxide oxygenase	99.74
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	99.73
KOG1619	245	consensus Cytochrome b [Energy production and conv	99.65
PF04526	101	DUF568: Protein of unknown function (DUF568); Inte	99.6
cd00241	184	CDH_cytochrome Cellobiose dehydrogenase (Cellobios	99.36
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	99.29
KOG3568	603	consensus Dopamine beta-monooxygenase [Amino acid	99.17
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	96.21
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	96.12
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	96.1
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	96.04
PF13301	175	DUF4079: Protein of unknown function (DUF4079)	95.87
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	95.78
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	95.78
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	95.55
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	95.46
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	95.32
PLN02680	232	carbon-monoxide oxygenase	95.26
PLN02810	231	carbon-monoxide oxygenase	93.87
PLN02351	242	cytochromes b561 family protein	93.83
KOG1619	245	consensus Cytochrome b [Energy production and conv	92.98
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	92.67
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	92.21
COG2717	209	Predicted membrane protein [Function unknown]	90.63
PF10067	103	DUF2306: Predicted membrane protein (DUF2306); Int	90.47
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	89.68
COG5658	204	Predicted integral membrane protein [Function unkn	87.59
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	86.4
PF13172	34	PepSY_TM_1: PepSY-associated TM helix	86.16
PF05568	189	ASFV_J13L: African swine fever virus J13L protein;	86.11
PF13301	175	DUF4079: Protein of unknown function (DUF4079)	85.88
PF10951	347	DUF2776: Protein of unknown function (DUF2776); In	82.99
PF10361	296	DUF2434: Protein of unknown function (DUF2434); In	82.38
PF01292	182	Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPr	80.53

>KOG4293 consensus Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-40  Score=334.06  Aligned_cols=352  Identities=43%  Similarity=0.796  Sum_probs=293.5

Q ss_pred             ccccccc--CcCcccccccccccccccCCCCCeEEEEEEecCCCeEEEEEEEecCCCCceEEEEeCCCCCCCCCCcEEEE
Q 015780           20 ASSYAQQ--TCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVA   97 (400)
Q Consensus        20 ~~~~~~~--~C~~~~~~~~~~~~~C~~l~~~~~~l~W~~~~~~~~i~i~~~~~~~~~~gWvA~Gfs~~g~~M~gsd~vI~   97 (400)
                      +.++.++  .|.+.+++.+++|+.|.++|+++..++++++.+++.+++.|....  ...|++++|+|++.+|.++.++++
T Consensus        15 ~~~~~~~~~~C~~~~~~~~~~~~~c~~lp~~~~~i~~~~~~~~~~~~i~~~~~~--~~~w~~~~~~p~~t~m~~~~~~va   92 (403)
T KOG4293|consen   15 TSPAFSQTDTCSSQTFNIDKSFDSCVDLPTLNSFIHYTYNSANGVLSIAFSAPL--SSAWVAWAINPTGTGMVGSRALVA   92 (403)
T ss_pred             cCchhhhhcceeeeeccCCccccccccCCCCCceEEEEEecCCCeEEEEEecCC--cccccccccCCccccccccceeee
Confidence            4455554  699988888899999999999999999999988899999998743  445999999999977999999999


Q ss_pred             EECC-CCCeEEEEeecCCCCCCCCCCCcceeeecceEEEeCCE---EEEEEEEecC-CCCcceeEEEeeCCCC--CCCCC
Q 015780           98 FQNS-TGRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQ---WTIFATLQLT-NNLLSTNQVWQEGPMN--GDTPG  170 (400)
Q Consensus        98 ~~~~-~G~v~v~~~~~~g~~~p~~d~~~~~~l~~~s~~~~~g~---~~~~f~~~l~-~~~~~~~~IwA~G~~~--~~~l~  170 (400)
                      |.++ +|...+..++..++.+........+++.+....+....   +.++.+.+++ .+...++.+|+.|+..  +..+.
T Consensus        93 ~~~~~~g~~~~~t~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~l~~~~~~~~~~~w~~~~~~~~g~~~~  172 (403)
T KOG4293|consen   93 YAGSSSGATTVKTYVILGYSPSLVPALLSFTLGNVRAECNLRSSSPIGIFASFKLAGANGGKYSAVWQVGPTGSGGGRPK  172 (403)
T ss_pred             eeccccchhhceeeeecccchhhcccccceeeecCcchhhccCCCCceEEEEEEeecCCCceeEEEEEccCCccCCCCCc
Confidence            9975 67788888888888643333334455555544443333   6778888888 4668889999999876  68899


Q ss_pred             CCCCCCCCCccceeEeccc--CccccCC--CCCCcccchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhH
Q 015780          171 AHAMSGDNARSVGTIDFRT--GQTTAGG--GSSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHV  246 (400)
Q Consensus       171 ~H~~~g~n~~s~~~ldl~~--g~~~~~~--~~~~~~~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~  246 (400)
                      +|+..+.+..+...+|++.  |......  ....++.++...||++|.++|++++|+|++.+||+|..+..++.||++|+
T Consensus       173 ~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~hgil~~~sw~il~p~g~i~ary~~~~~~~~~~Wfy~H~  252 (403)
T KOG4293|consen  173 RHKLSGSNLASVTSLDLTSDIGELSITSEGNFNSSGLKLRMTHGILNALSWGILFPAGAIIARYLRQKPSGDPTWFYIHR  252 (403)
T ss_pred             cCccccCCccceeecccccccccccccccCcccCcchhccccHHHHhhhhhheeccccceeEEEecccCCCCcchhhhhh
Confidence            9999887766666777775  3222111  11233456677799999999999999999999999998778999999999


Q ss_pred             hHHHHHHHHHHHHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHHHHHHHH
Q 015780          247 ACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSI  326 (400)
Q Consensus       247 ~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~  326 (400)
                      .+|..++++.+.|+..+....+++.+..+..|..+|+.++++.++|++..++||.|++|.|++|||+|+..||..+++|+
T Consensus       253 ~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~h~~~G~~~~~l~~lQ~~~~l~Rp~~~~k~R~~~nwyH~~~g~~~~~~~~  332 (403)
T KOG4293|consen  253 ACQFTGFILGVAGFVDGLKLSNESDGTVYSAHTDLGIILLVLAFLQPLALLLRPLPESKIRRYWNWYHHLVGRLSIILGI  332 (403)
T ss_pred             hheeeEEEEEeeeeeeeEEEccCCCceeeeecccchhHHHHHHHHHHHHHHhcCCcccCceeccceeeeecCcceeeehh
Confidence            99999999999999999998887777777999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcccccCCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015780          327 INIFEGFDILDPEKKWK-RAYIGILIFLGAVAALLEAITWVIVLKRKN  373 (400)
Q Consensus       327 ~ni~~Gl~l~~~~~~~~-~~~~~~~~~~~~~~i~lei~~w~~~~~~~~  373 (400)
                      +|++.|+.+.++...|+ ++|+.+.+++.++++++|+.+|+...+|.+
T Consensus       333 ~~i~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~  380 (403)
T KOG4293|consen  333 VNIFDGLELLYPGQSWIKLGYGSILAVLGLIAVILEILSWRITIERPS  380 (403)
T ss_pred             hHHhhhHhhhcCCCceEEeeeeeEEEEechhhhhhhhheeeeeecccC
Confidence            99999999999988898 799999999999999999999877655544

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=99.97  E-value=3.9e-31  Score=241.64  Aligned_cols=178  Identities=39%  Similarity=0.696  Sum_probs=151.4

Q ss_pred             cceeEecccCccccCCC--------CCCcccchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHH
Q 015780          181 SVGTIDFRTGQTTAGGG--------SSDSRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASG  252 (400)
Q Consensus       181 s~~~ldl~~g~~~~~~~--------~~~~~~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~  252 (400)
                      +..++|+++|+++....        ...+.+..+++||++|++||++++|+|++++||++.   .++.||++|+.+|+++
T Consensus         3 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~Hg~lm~iaw~~l~p~gil~ar~~~~---~~~~~~~~H~~~q~~~   79 (191)
T cd08760           3 SSYSLDLASGTSSSGGSPFLLPNGSSVGSSDTLIKAHGVLMAIAWGILMPIGALLARYFLL---GDPVWFYLHAGLQLLA   79 (191)
T ss_pred             cceEEEeccceeccCCCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCchhHHHHHHHHHHH
Confidence            34678888877653321        112346789999999999999999999999999743   4688999999999999


Q ss_pred             HHHHHHHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHc
Q 015780          253 YIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEG  332 (400)
Q Consensus       253 ~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~G  332 (400)
                      ++++++|+++++..........++.|+++|+++++++++|++.|++||.+..+.|++|+++|+++|++++++|++|+.+|
T Consensus        80 ~~~~i~g~~~~~~~~~~~~~~~~~~H~~lGl~~~~l~~lQ~~~G~~~~~~~~~~R~~~~~~H~~~G~~~~~l~~v~i~~G  159 (191)
T cd08760          80 VLLAIAGFVLGIVLVQGGGGSLNNAHAILGIIVLALAILQPLLGLLRPHPGSKKRSIWNWAHRWLGRAALILAIVNIFLG  159 (191)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCcCcchhhhHHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987511122336899999999999999999999999998888899999999999999999999999999


Q ss_pred             ccccCCC--CcchhHHHHHHHHHHHHHHHHH
Q 015780          333 FDILDPE--KKWKRAYIGILIFLGAVAALLE  361 (400)
Q Consensus       333 l~l~~~~--~~~~~~~~~~~~~~~~~~i~le  361 (400)
                      +.+.+.+  +.+.++|.++++++.++.+++|
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (191)
T cd08760         160 LDLAGAGTPKAWKIAYGVVVAVLALVYLILE  190 (191)
T ss_pred             HHHhcCCcccchhhHHHHHHHHHHHHHHHHc
Confidence            9999876  7888899999998888888776

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=99.92  E-value=7.8e-25  Score=187.67  Aligned_cols=123  Identities=35%  Similarity=0.618  Sum_probs=110.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHh-hhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCC--CCCCcccccchhHH
Q 015780          208 THGVLNAVSWGVLIPMGAMIARY-LKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDS--PGIKYNKHRNIGIA  284 (400)
Q Consensus       208 ~Hg~lm~~aw~il~P~gil~aR~-~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~~~~~~~H~~lG~~  284 (400)
                      +||++|.+||++++|.|++++|+ .+.  ..++.||++|+.+|+++++++++|+++++...++.  +++ +++|+++|++
T Consensus         1 ~H~~lm~~~f~~l~p~gil~~r~~~~~--~~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~~~~~~~~~-~s~H~~lGl~   77 (129)
T smart00665        1 LHPVLMILGFGFLMGEAILVARPLTRF--LSKPTWFLLHVVLQILALVLGVIGLLAIFISHNESGIANF-YSLHSWLGLA   77 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhHhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCc-cchhHHHHHH
Confidence            69999999999999999999997 333  25688999999999999999999999999876653  234 6999999999


Q ss_pred             HHHHHHHHHhheeeccCCC---CCCcccchhhhHHHHHHHHHHHHHHHHHcc
Q 015780          285 LFAIGTLQMFAMLLRPKPD---HKYRLYWNIYHWSLGYSVIVLSIINIFEGF  333 (400)
Q Consensus       285 ~~~l~~~Q~l~~~~rp~~~---~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl  333 (400)
                      ++++..+|++.|++||.++   .+.|+.++++|+++|++++++|++|+.+|+
T Consensus        78 ~~~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~~~~lG~  129 (129)
T smart00665       78 AFVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFILAIVTIFLGL  129 (129)
T ss_pred             HHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            9999999999999887775   677899999999999999999999999996

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=99.88  E-value=3.8e-22  Score=172.54  Aligned_cols=126  Identities=29%  Similarity=0.491  Sum_probs=108.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCC--CCCCcccccchhHHH
Q 015780          208 THGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDS--PGIKYNKHRNIGIAL  285 (400)
Q Consensus       208 ~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~~~~~~~H~~lG~~~  285 (400)
                      +|+++|.+||++++|.|++++|+.+..+.+++.|+++|+.+|++++++.++|+++++...++.  +++ +++|+++|+++
T Consensus         1 ~H~~lm~~~f~~l~~~~il~~r~~~~~~~~~~~~~~~H~~lq~l~~~~~~~G~~~~~~~~~~~~~~h~-~s~H~~lG~~~   79 (137)
T PF03188_consen    1 WHPILMTIGFVFLMPEGILAARYNPFRRKSRKWWFRIHWILQVLALVFAIIGFVAIFINKNRNGKPHF-KSWHSILGLAT   79 (137)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC-CCchhhhhHHH
Confidence            699999999999999999999974421335788999999999999999999999998876543  344 68999999999


Q ss_pred             HHHHHHHHhheeec---cCCCCCCcccchhhhHHHHHHHHHHHHHHHHHccc
Q 015780          286 FAIGTLQMFAMLLR---PKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFD  334 (400)
Q Consensus       286 ~~l~~~Q~l~~~~r---p~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~  334 (400)
                      ++++++|++.|+++   |.++.+.|+.++++|+++|++++++|++|+.+|+.
T Consensus        80 ~~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~~i~~G~~  131 (137)
T PF03188_consen   80 FVLALLQPLLGFFRFFMPGLPRKRRPIWNKWHRWLGYLIYVLAIATIFLGLT  131 (137)
T ss_pred             HHHHHHHHHHHHHHHccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988753   44555678889999999999999999999999984

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=99.86  E-value=1e-21  Score=168.67  Aligned_cols=125  Identities=22%  Similarity=0.348  Sum_probs=109.1

Q ss_pred             hhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCC--CCCCcccccchhH
Q 015780          206 RNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDS--PGIKYNKHRNIGI  283 (400)
Q Consensus       206 ~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~~~~~~~H~~lG~  283 (400)
                      +++|+++|.++|++++|.|++.+|++|..  .++.|+++|+.+|+++.++.++|+++++...++.  .++ ++.|+++|+
T Consensus         2 f~~H~~lm~~g~~~l~~~~il~~r~~~~~--~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~~~~~~~h~-~s~Hs~lGl   78 (131)
T cd08554           2 FNWHPLLMVIGFVFLMGEALLVYRVFRLL--TKRALKLLHAILHLLAFVLGLVGLLAVFLFHNAGGIANL-YSLHSWLGL   78 (131)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccc-hhHHHHHHH
Confidence            57999999999999999999999998765  4678999999999999999999999999876432  244 589999999


Q ss_pred             HHHHHHHHHHhheee---ccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcc
Q 015780          284 ALFAIGTLQMFAMLL---RPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGF  333 (400)
Q Consensus       284 ~~~~l~~~Q~l~~~~---rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl  333 (400)
                      +++++.++|++.|+.   .|.+..+.|..++++|+++|+++++++++|+++|+
T Consensus        79 ~~~~l~~~q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~t~~~G~  131 (131)
T cd08554          79 ATVLLFLLQFLSGFVLFLLPLLRLSYRSSLLPFHRFFGLAIFVLAIATILLGI  131 (131)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999988774   35544445889999999999999999999999984

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>smart00664 DoH Possible catecholamine-binding domain present in a variety of eukaryotic proteins

Probab=99.85  E-value=7.1e-20  Score=160.31  Aligned_cols=135  Identities=26%  Similarity=0.448  Sum_probs=109.2

Q ss_pred             CCeEEEEEEecCCCeEEEEEEEecCCCCceEEEEeCCCCCCCCCCcEEEEEECCCCCeEEEEeecCCCCCCCCCCCccee
Q 015780           48 LNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTLQPGSLSFQ  127 (400)
Q Consensus        48 ~~~~l~W~~~~~~~~i~i~~~~~~~~~~gWvA~Gfs~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~~d~~~~~~  127 (400)
                      .++.++|+++.+ ++++|+++.+.. +.||+|||||++++ |.|+|+++|+.+++|.+.+.|+|++++..|.+|...+  
T Consensus         2 ~~~~l~W~~~~~-~~v~~~l~~~~~-~~gwvaiGfs~~~~-M~~~d~vv~~~~~~g~~~v~d~~~~~~~~~~~d~~~~--   76 (148)
T smart00664        2 CDYFLSWSVDGE-NSIAFELSGPTS-TNGWVAIGFSPDGQ-MAGADVVVAWVDNNGRVTVKDYYTPGYGPPVEDDQQD--   76 (148)
T ss_pred             ceEEEEEEECCC-CeEEEEEEEecC-CCCEEEEEECCCCC-cCCCCEEEEEEcCCCCEEEEEEEcCCCCCCCcCcccc--
Confidence            357899999855 787788877542 38999999999865 9999999999987789999999999999888776544  


Q ss_pred             eecc-eEEEeCCEEEEEEEEecCCCCc--------ceeEEEeeCCC-CCCCCCCCCCCCCCCccceeEecccC
Q 015780          128 VPNI-SATLEGNQWTIFATLQLTNNLL--------STNQVWQEGPM-NGDTPGAHAMSGDNARSVGTIDFRTG  190 (400)
Q Consensus       128 l~~~-s~~~~~g~~~~~f~~~l~~~~~--------~~~~IwA~G~~-~~~~l~~H~~~g~n~~s~~~ldl~~g  190 (400)
                      +... ++.++||.++|+|+|++.+++.        +.+++||.|+. .++.+.+|+..   ..+..++++.+.
T Consensus        77 ~~~~~~~~~~~g~~~~~f~R~l~t~d~~d~~~~~~~~~~i~a~G~~~~~~~~~~H~~~---~~~~~~i~~~~~  146 (148)
T smart00664       77 VTDLLSATYENGVLTCRFRRKLGSNDPDDKSLLDGTVHVLWAKGPLSPNGGLGYHDFS---LKSTKKVCLSSC  146 (148)
T ss_pred             cccceeEEEECCEEEEEEEEEccCCCccccccCCCeEEEEEEECCCCCCCCeeecccc---ccCceEEEeccC
Confidence            3333 6778999999999999998753        67899999983 36789999864   236678888754

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press).

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=99.82  E-value=5.8e-20  Score=166.79  Aligned_cols=132  Identities=17%  Similarity=0.163  Sum_probs=109.7

Q ss_pred             cchhhcchhHHHHHHHHHHHHHHHHHHhhhhcc-cCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCC--CCCCccccc
Q 015780          203 RRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFK-TANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDS--PGIKYNKHR  279 (400)
Q Consensus       203 ~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~-~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~~~~~~~H~  279 (400)
                      +.++++|+++|.++|++++|.|++..|-.+... .+++.|+++|+.+|.+++++.++|+++.+...++.  +++ ++.|+
T Consensus        18 ~~~f~~Hp~~m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~~~~~~~~hf-~s~H~   96 (183)
T cd08761          18 TSLFSWHPLLMSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYNKERNGKPHF-TSWHG   96 (183)
T ss_pred             cceeehhHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc-cchhH
Confidence            468999999999999999999999755322211 24677899999999999999999999888765432  245 58999


Q ss_pred             chhHHHHHHHHHHHhheee---ccCCC--CCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          280 NIGIALFAIGTLQMFAMLL---RPKPD--HKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       280 ~lG~~~~~l~~~Q~l~~~~---rp~~~--~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      ++|+++++++++|++.|+.   +|.+.  .++|+.++++|+++|++++++|++|+.+|++.
T Consensus        97 ~lGl~~~~l~~~Q~~~G~~~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~t~~lGl~~  157 (183)
T cd08761          97 ILGLVTVILIVLQALGGLALLYPPGLRRGESKAKKLKKYHRLSGYVAYLLGLATLVLGLET  157 (183)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHhhHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999999999988773   34333  25678899999999999999999999999987

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=99.82  E-value=5e-20  Score=159.53  Aligned_cols=131  Identities=18%  Similarity=0.215  Sum_probs=112.4

Q ss_pred             cccchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCC--CCCcccc
Q 015780          201 SRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSP--GIKYNKH  278 (400)
Q Consensus       201 ~~~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~--~~~~~~H  278 (400)
                      ++..++++|++||.++|.++++.|+++.|..|.   .++.|..+|+.+|.+++++.++|++..+...++.+  ++ +++|
T Consensus         3 ~~~~~Fn~HP~lM~~gfi~l~~eAiL~~r~~~~---~k~~~k~iH~~l~~la~~~~vvGl~avf~~~~~~~~~~~-~SlH   78 (144)
T cd08766           3 NKGLIFNVHPVLMVIGFIFLAGEAILAYKTVPG---SREVQKAVHLTLHLVALVLGIVGIYAAFKFHNEVGIPNL-YSLH   78 (144)
T ss_pred             CCcceeeccHHHHHHHHHHHHHHHHHHhhcccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccc-ccHH
Confidence            445789999999999999999999999887653   45677899999999999999999999888765542  33 6999


Q ss_pred             cchhHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          279 RNIGIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       279 ~~lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      +|+|++++++..+|.+.|+   +.|....+.|+...++|+++|+++++++++++.+|+..
T Consensus        79 SwlGl~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~~~la~~t~~lGl~e  138 (144)
T cd08766          79 SWLGIGTISLFGLQWLFGFVTFWFPGASRNTRAALLPWHVFLGLAIYYLAIATAETGLLE  138 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988665   47775545677788899999999999999999999864

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PLN02810 carbon-monoxide oxygenase

Probab=99.80  E-value=5.8e-19  Score=161.73  Aligned_cols=172  Identities=19%  Similarity=0.203  Sum_probs=130.5

Q ss_pred             cchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCC--CCCcccccc
Q 015780          203 RRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSP--GIKYNKHRN  280 (400)
Q Consensus       203 ~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~--~~~~~~H~~  280 (400)
                      +..+++|+++|.+++.++...||++.|.++.   .++.+..+|+.+|.++++++++|+...+...++.+  ++ ++.|+|
T Consensus        44 ~~~FN~HPvlMv~Gfi~l~geAIL~Yr~~~~---~k~~~K~iH~~lh~~Al~l~vvGl~Avf~~Hn~~~i~nl-ySLHSW  119 (231)
T PLN02810         44 NLIFNLHPVLMLIGLIIIGGEAIMSYKSLPL---KKEVKKLIHLVLHAIALILGIFGICAAFKNHNESGIANL-YSLHSW  119 (231)
T ss_pred             CceeeehHHHHHHHHHHHhhHHHHHhhcccc---ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCce-eeHHHH
Confidence            4589999999999999999999999887654   24556899999999999999999999998776543  33 799999


Q ss_pred             hhHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHccccc----CC-------CCcchhHH
Q 015780          281 IGIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDIL----DP-------EKKWKRAY  346 (400)
Q Consensus       281 lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~----~~-------~~~~~~~~  346 (400)
                      +|++++++..+|.+.|+   +.|......|....++|..+|..+++++++++.+|+..-    +.       +....+-+
T Consensus       120 lGl~tv~Lf~lQw~~Gf~~Fl~P~~~~~~R~~~lP~Hv~~Gl~if~LAiata~lGi~EKl~Fl~~~~~~~~~~Ea~lvN~  199 (231)
T PLN02810        120 LGIGIISLYGIQWIYGFIVFFFPGGSTNLRSGSLPWHVLFGLFVYILAVGNAALGFLEKLTFLESGGLDKYGSEALLVNF  199 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCchhhhHHH
Confidence            99999999999987665   577766666777889999999999999999999998752    11       12233445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q 015780          347 IGILIFLGAVAALLEAITWVIVLKRKNGNSVKHHHSI  383 (400)
Q Consensus       347 ~~~~~~~~~~~i~lei~~w~~~~~~~~~~~~~~~~~~  383 (400)
                      ++++.+++++.+++-+..     +...++..+.|++|
T Consensus       200 ~Glliv~fg~~V~~~~~~-----~~~~~~~~~~~~~~  231 (231)
T PLN02810        200 TAIITILYGAFVVLTALA-----QSPSDEDDYSYSAI  231 (231)
T ss_pred             HHHHHHHHHHHHHHhhcc-----CCCCCCCccccccC
Confidence            555555555544443322     22233445556654

>PLN02351 cytochromes b561 family protein

Probab=99.79  E-value=8.1e-19  Score=162.06  Aligned_cols=155  Identities=15%  Similarity=0.096  Sum_probs=118.3

Q ss_pred             chh-hcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccC-CCCCCcccccch
Q 015780          204 RRR-NTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGND-SPGIKYNKHRNI  281 (400)
Q Consensus       204 ~~~-~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~-~~~~~~~~H~~l  281 (400)
                      ..+ ++|+++|.++|++|.+.||++.|.+|.   .++.|+.+|+.+|.++++++++|+...+...+. .+++ ++.|+|+
T Consensus        48 ~iffn~HP~lMviGfi~L~geAILvYR~~~~---~~k~~K~lH~~Lh~~Ali~~vvGl~a~fh~~~~~i~nl-ySLHSWl  123 (242)
T PLN02351         48 LVYAVLHPLLMVIGFILISGEAILVHRWLPG---SRKTKKSVHLWLQGLALASGVFGIWTKFHGQDGIVANF-YSLHSWM  123 (242)
T ss_pred             ceeecccHHHHHHHHHHHHHHHHHHhhcccc---cchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccch-hHHHHHH
Confidence            355 799999999999999999999998764   345689999999999999999999884332221 1233 7999999


Q ss_pred             hHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHccccc----C-C-------CCcchhHH
Q 015780          282 GIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDIL----D-P-------EKKWKRAY  346 (400)
Q Consensus       282 G~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~----~-~-------~~~~~~~~  346 (400)
                      |++++++..+|.+.|+   +.|......|....++|..+|+.+++++++++.+|+..-    . .       +....+-+
T Consensus       124 Gl~tv~Lf~lQwv~Gf~~F~~P~~~~~~Ra~~~P~Hv~~Gl~if~LaiaTa~lGl~EKl~F~~~~~~y~~~~~Ea~lvN~  203 (242)
T PLN02351        124 GLICVSLFGAQWLTGFMSFWHRGEMRTTRTTVLPWHVFLGLYTYGLAVATAETGLLEKLTFLQTKRNVSKHGSESMVVNG  203 (242)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCchhhhHHH
Confidence            9999999999987665   356555556777889999999999999999999998742    1 1       22334455


Q ss_pred             HHHHHHHHHHHHHHHH
Q 015780          347 IGILIFLGAVAALLEA  362 (400)
Q Consensus       347 ~~~~~~~~~~~i~lei  362 (400)
                      ++++.+++++.+++-+
T Consensus       204 ~Glliv~fG~~Vv~~~  219 (242)
T PLN02351        204 LGLGLALLSGIVILAA  219 (242)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            5555555554444444

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=99.78  E-value=8.4e-19  Score=155.64  Aligned_cols=132  Identities=24%  Similarity=0.245  Sum_probs=112.1

Q ss_pred             chhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCC-CCCcccccchh
Q 015780          204 RRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSP-GIKYNKHRNIG  282 (400)
Q Consensus       204 ~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~lG  282 (400)
                      +.+++|+.+|.+++++|...++++.|..+.++..+..|+.+|..+|.++++++++|+...+...++.+ ...+|.|+|+|
T Consensus        33 ~~Fn~HP~lMv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf~~hn~~~~~nlySlHSWlG  112 (179)
T cd08762          33 KNFNWHPVLMVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFHNVHHTANLYSLHSWVG  112 (179)
T ss_pred             CceeehHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHH
Confidence            47999999999999999999999998766543345668899999999999999999999998876643 12268999999


Q ss_pred             HHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          283 IALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       283 ~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      ++++++..+|.+.|+   +-|..+...|....++|+.+|+.+++++++++.+|+..
T Consensus       113 l~t~~Lf~lQ~~~Gf~~f~~p~~~~~~ra~~~p~H~~~G~~if~Laiat~~lGl~e  168 (179)
T cd08762         113 ICTVALFTCQWVMGFTSFLLPWAPMWLRALVKPIHVFFGAMILVLSIASCISGINE  168 (179)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987665   35555545677789999999999999999999999864

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=99.78  E-value=7.1e-19  Score=153.18  Aligned_cols=132  Identities=17%  Similarity=0.184  Sum_probs=112.4

Q ss_pred             cchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCC--CCCcccccc
Q 015780          203 RRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSP--GIKYNKHRN  280 (400)
Q Consensus       203 ~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~--~~~~~~H~~  280 (400)
                      ...+++|++||.+++.+++..+|++.|..+..+..++.+..+|+.+|.+++++.++|+...+...++.+  ++ +|+|+|
T Consensus         9 ~~~Fn~HPlLm~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf~~hn~~~~~~f-ySlHSw   87 (153)
T cd08765           9 AAEFNWHPVLMVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFVFHNAKNIPNM-YSLHSW   87 (153)
T ss_pred             CCeeechHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCcc-ccHHHH
Confidence            358999999999999999999999988655433345677899999999999999999999888766543  44 799999


Q ss_pred             hhHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          281 IGIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       281 lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      +|++++++..+|.+.|+   +-|......|+...++|+++|+++++++++++.+|+..
T Consensus        88 lGl~t~~l~~lQ~~~Gf~~f~~P~~~~~~r~~~~p~H~~~G~~i~~Lai~t~~lG~~e  145 (153)
T cd08765          88 VGLAAVILYPLQLVLGISVYLLPVAPVRLRAALMPLHVYSGLFIFGTVIATALMGITE  145 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987665   46665555688889999999999999999999999864

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=99.77  E-value=1.7e-18  Score=158.86  Aligned_cols=130  Identities=19%  Similarity=0.228  Sum_probs=109.8

Q ss_pred             cchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCC----CCCCcccc
Q 015780          203 RRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDS----PGIKYNKH  278 (400)
Q Consensus       203 ~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~----~~~~~~~H  278 (400)
                      ...+++|.++|.+++.++++.|+++.|.+|..  .++.+..+|+.+|.++++++++|+..++...++.    +++ +|.|
T Consensus        21 ~~~Fn~HP~lM~~Gfi~l~geAiLvyr~~~~~--~k~~~k~~H~~L~~lAl~~~ivGl~avf~~hn~~~~~~~hf-ySlH   97 (214)
T cd08764          21 GLQFNWHPLLMVLGLIFLYGNSILVYRVFRNT--RKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPIPNM-YSLH   97 (214)
T ss_pred             CceEeecHHHHHHHHHHHHHHHHHHhccCccc--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc-cchH
Confidence            35799999999999999999999999987753  3456778999999999999999998887765443    233 6999


Q ss_pred             cchhHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          279 RNIGIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       279 ~~lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      +|+|++++++..+|.+.|+   +.|......|....++|+++|+++++++++++.+|+..
T Consensus        98 SwlGl~t~~L~~lQ~~~Gf~~fl~P~~~~~~r~~~~p~H~~~Gl~~fvLaiaT~~lGl~e  157 (214)
T cd08764          98 SWLGLTAVILFSLQWVGGFVSFLFPGLPETLRAAYLPLHVFFGLFIFVLAVATALLGITE  157 (214)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988665   46765445576677799999999999999999999865

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF03351 DOMON: DOMON domain; InterPro: IPR005018 The DOMON domain is an 110-125 residue long domain which has been identified in the physiologically important enzyme dopamine beta-monooxygenase and in several other secreted and transmembrane proteins from both plants and animals

Probab=99.76  E-value=3.1e-17  Score=139.01  Aligned_cols=111  Identities=22%  Similarity=0.323  Sum_probs=90.3

Q ss_pred             CCCeEEEEEEecCCCeEEEEEEEecCCCCceEEEEeCCCCCCCCCCcEEEEEECCCCCeEEEEee-cCCCCCCCCCCC--
Q 015780           47 VLNSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTP-IGSGSPTLQPGS--  123 (400)
Q Consensus        47 ~~~~~l~W~~~~~~~~i~i~~~~~~~~~~gWvA~Gfs~~g~~M~gsd~vI~~~~~~G~v~v~~~~-~~g~~~p~~d~~--  123 (400)
                      ..++.|+|+++.+++++.|++++.. .+.+|+|+|||++++ |.++|+++|+.+ +|++.++|++ ..++..|..|.+  
T Consensus         2 ~~~~~l~w~~~~~~~~i~~~l~~~~-~~~~w~aiGfs~~~~-M~~~Dvv~~~~~-~~~~~v~d~~~~~~~~~p~~d~~~~   78 (124)
T PF03351_consen    2 DCNFSLSWTVDGDNNTIEFELTGPA-NTNGWVAIGFSDDGG-MGGSDVVVCWVD-DGKVYVQDYYSTGGYGPPTVDDQGS   78 (124)
T ss_pred             CceEEEEEEEECCCCEEEEEEEecc-CCCCEEEEEEccccC-CCCCcEEEEEEc-CCceeEEEeeccCcccceeeccccC
Confidence            3468899999977777666666533 248999999999877 999999999997 6999999999 999998988854  


Q ss_pred             cceeeecceEEEeCCEEEEEEEEecCCCC---------cceeEEEeeC
Q 015780          124 LSFQVPNISATLEGNQWTIFATLQLTNNL---------LSTNQVWQEG  162 (400)
Q Consensus       124 ~~~~l~~~s~~~~~g~~~~~f~~~l~~~~---------~~~~~IwA~G  162 (400)
                      .++.+.  ++.++++.++|.|+|++.+++         .+.++|||+|
T Consensus        79 ~~~~~~--~~~~~~g~~~~~F~R~l~t~d~~d~~l~~~~~~~~i~A~G  124 (124)
T PF03351_consen   79 QDIQLL--SGSYSNGTTTCSFTRPLNTGDSQDYDLDSNGTYYVIWAYG  124 (124)
T ss_pred             CcEEEE--EEEEECCEEEEEEEEEccCCCCCccEecCCCcEEEEEEeC
Confidence            444444  567789999999999998842         4568999987

It has been named after DOpamine beta-MOnooxygenase N-terminal domain. The DOMON domain can be found in one to four copies and in association with other domains, such as the Cu-ascorbate dependent monooxygenase domain, the epidermal growth factor domain, the trypsin inhibitor-like domain (TIL), the SEA domain and the Reelin domain. The architectures of the DOMON domain proteins strongly suggest a function in extracellular adhesion []. The sequence conservation is predominantly centred around patches of hydrophobic residues. The secondary structure prediction of the DOMON domain points to an all-beta-strand fold with seven or eight core strands supported by a buried core of conserved hydrophobic residues. There is a chraracteristic motif with two small positions (Gly or Ser) corresponding to a conserved turn immediately C-terminal to strand three. It has been proposed that the DOMON domain might form a beta-sandwich structure, with the strands distributed into two beta sheets as is seen in many extracellular adhesion domains such as the immunoglobulin, fibronectin type III, cadherin and PKD domains [].

>PLN02680 carbon-monoxide oxygenase

Probab=99.74  E-value=1.3e-17  Score=153.90  Aligned_cols=131  Identities=18%  Similarity=0.183  Sum_probs=110.6

Q ss_pred             cccchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCC--CCCcccc
Q 015780          201 SRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSP--GIKYNKH  278 (400)
Q Consensus       201 ~~~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~--~~~~~~H  278 (400)
                      ++...+++|.+||.+++.++...+++..|..|   ..++.+..+|+.+|.+++++.++|+...++..++.+  ++ +|+|
T Consensus        42 ~~~~~Fn~HPlLM~~Gfi~l~geAIL~yr~~~---~~k~~~K~iH~~L~~lA~~l~vvGl~avfk~hn~~~~~nf-ySlH  117 (232)
T PLN02680         42 NKDLIFNVHPVLMVIGLVLLNGEAMLAYKTVP---GTKNLKKLVHLTLQFLAFCLSLIGVWAALKFHNEKGIDNF-YSLH  117 (232)
T ss_pred             CCcceEechHHHHHHHHHHHHHHHHhcccccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccc-ccHH
Confidence            34468999999999999999999999976544   345667899999999999999999999888776543  34 6999


Q ss_pred             cchhHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          279 RNIGIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       279 ~~lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      +|+|++++++..+|.+.|+   +.|....+.|+...++|+++|+++++++++++.+|+..
T Consensus       118 SWlGl~t~iL~~lQ~~~Gf~~f~~P~~~~~~R~~~~p~H~~~G~~if~LaiaT~~lG~~E  177 (232)
T PLN02680        118 SWLGLACLFLFSLQWAAGFVTFWYPGGSRNSRASLLPWHVFFGIYIYALAVATATTGILE  177 (232)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987665   46765445566677899999999999999999999864

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=99.73  E-value=1.2e-17  Score=144.66  Aligned_cols=129  Identities=16%  Similarity=0.167  Sum_probs=111.0

Q ss_pred             chhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCC--CCCcccccch
Q 015780          204 RRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSP--GIKYNKHRNI  281 (400)
Q Consensus       204 ~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~--~~~~~~H~~l  281 (400)
                      ..+++|+++|.+++.+++..++++.|..+..  .++.+.++|+.+|.+++++.++|+...+...++.+  ++ ++.|+|+
T Consensus         5 ~~Fn~HP~lm~~G~i~l~geaiL~~~~~~~~--~k~~~k~~H~~L~~la~~~~~~Gl~av~~~h~~~~~~hf-~SlHswl   81 (143)
T cd08763           5 LQFNVHPLCMVLGLVFLCGEALLVYRVFRNE--TKRSTKILHGLLHIMALVISLVGLVAVFDYHQANGYPDM-YSLHSWC   81 (143)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhcccccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCcc-ccHHHHH
Confidence            4899999999999999999999999876543  34566789999999999999999999887665432  44 7999999


Q ss_pred             hHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          282 GIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       282 G~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      |++++++..+|.+.|+   +-|....+.|..++++|+++|+++++++++++.+|+..
T Consensus        82 Gl~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~f~la~~t~~lG~~e  138 (143)
T cd08763          82 GILTFVLYFLQWLIGFSFFLFPGASFTLRSQYKPLHEFFGRALFLSSVGTSLLGLTE  138 (143)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988665   46765556688899999999999999999999999863

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>KOG1619 consensus Cytochrome b [Energy production and conversion]

Probab=99.65  E-value=2.1e-16  Score=144.53  Aligned_cols=131  Identities=19%  Similarity=0.252  Sum_probs=113.6

Q ss_pred             cchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCC-CCCcccccch
Q 015780          203 RRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSP-GIKYNKHRNI  281 (400)
Q Consensus       203 ~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~l  281 (400)
                      ++.+++|+++|.++|.++...++++.|.+|..  .++.-+.+|..+|+.+.+++++|+...+...+..+ ...++.|+|+
T Consensus        52 ~~~fnlHP~lMviGfI~l~GeAiL~YR~~r~~--~k~~~KliH~~LH~~Alvl~i~gl~avf~~hn~~~i~NfySLHSWl  129 (245)
T KOG1619|consen   52 NKEFNLHPVLMVIGFIYLQGEAILIYRVFRYT--SKKVSKLIHLGLHIIALVLAIIGLCAVFDSHNLVGIANFYSLHSWL  129 (245)
T ss_pred             chhcCcchHHHHHHHHHhccceeeeeehhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccceeeHHHHH
Confidence            57899999999999999999999999998865  34555689999999999999999998888766543 1237999999


Q ss_pred             hHHHHHHHHHHHhhee---eccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          282 GIALFAIGTLQMFAML---LRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       282 G~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      |+.++.+..+|.+.|+   +.|.-..+.|....++|+.+|..+++++++|+.+|+..
T Consensus       130 Gl~~v~ly~~Q~v~GF~tfl~pg~~~~~Rs~lmP~H~~~Gl~~f~lai~ta~~Gl~e  186 (245)
T KOG1619|consen  130 GLCVVILYSLQWVFGFFTFLFPGSPESYRSRLMPWHVFLGLAIFILAIVTALTGLLE  186 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCccHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999977555   56776667899999999999999999999999999954

>PF04526 DUF568: Protein of unknown function (DUF568); InterPro: IPR017214 This group represents an uncharacterised conserved protein

Probab=99.60  E-value=9.7e-15  Score=118.49  Aligned_cols=99  Identities=53%  Similarity=0.805  Sum_probs=92.7

Q ss_pred             CCCCcEEEEEECCC-CCeEEEEeecCCCCCCCCCCCcceeeecceEEEeCCEEEEEEEEecCCCCcceeEEEeeCCCC-C
Q 015780           89 MAGSQCLVAFQNST-GRPVAYTTPIGSGSPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNNLLSTNQVWQEGPMN-G  166 (400)
Q Consensus        89 M~gsd~vI~~~~~~-G~v~v~~~~~~g~~~p~~d~~~~~~l~~~s~~~~~g~~~~~f~~~l~~~~~~~~~IwA~G~~~-~  166 (400)
                      |.|++++|++++++ |.+.+++|.++++..+....++++++.+.+++++++.++||++.+|+.+.+++|++|++|+.+ +
T Consensus         1 M~GtqALvAf~~~~~G~~~v~T~~i~sy~~~l~~~~lsf~v~~lsae~~~~~~~IfAtl~Lp~n~t~vnhVWQ~G~~v~g   80 (101)
T PF04526_consen    1 MVGTQALVAFKNSNGGSVTVYTYNITSYSPSLQPGPLSFDVSDLSAEYSGGEMTIFATLKLPGNSTSVNHVWQVGPSVQG   80 (101)
T ss_pred             CCCceEEEEEeCCCCceEEEEEEeecccccccccccccccccceEeEEeCCEEEEEEEEEcCCCCcEEEEEeCcCCccCC
Confidence            99999999999987 889999999999988676677889999999999999999999999999999999999999988 8


Q ss_pred             CCCCCCCCCCCCCccceeEec
Q 015780          167 DTPGAHAMSGDNARSVGTIDF  187 (400)
Q Consensus       167 ~~l~~H~~~g~n~~s~~~ldl  187 (400)
                      +.+..|+..++|+.|..+|||
T Consensus        81 g~p~~H~~~~~Nl~S~gtldl  101 (101)
T PF04526_consen   81 GSPQPHPTSGANLQSKGTLDL  101 (101)
T ss_pred             CccccCCCCCccccceEEecC
Confidence            999999999999999999997

>cd00241 CDH_cytochrome Cellobiose dehydrogenase (CellobioseDH), cytochrome domain; This extracellular fungal oxidoreductase degrades both lignin and cellulose

Probab=99.36  E-value=1.6e-11  Score=110.53  Aligned_cols=133  Identities=15%  Similarity=0.149  Sum_probs=96.6

Q ss_pred             CCeEEEEEEecC---CCeEEEEEEEecCCCCceEEEEeCCCCCCCCCCcEEEEEECCCCCeEEEEeecCCCCCCC-CCCC
Q 015780           48 LNSFLHWNYDQS---TNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTL-QPGS  123 (400)
Q Consensus        48 ~~~~l~W~~~~~---~~~i~i~~~~~~~~~~gWvA~Gfs~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~-~d~~  123 (400)
                      .++++...+..+   ++.-++.++++.|.+.||+|+|.   |.+|.|+.++|+|.+++ +++++.|+.+||.+|. .+++
T Consensus        22 ~~itfgialP~~a~s~~~~d~i~qi~aP~~~gW~gls~---Gg~M~~~~L~vaw~~g~-~Vt~S~R~atg~~~P~~y~g~   97 (184)
T cd00241          22 HDVTYGIVLPPDALGADSTEFIGELVAPRASGWIGLAL---GGAMTNSLLLVAWPNGN-QIVSSTRYATGYTLPDAYTGP   97 (184)
T ss_pred             CCeEEEEEcCCcccCCCCCCEEEEEeCcCCCCeEEEee---cccCCCCeEEEEEcCCC-eEEEeEEEecCccCCCccCCC
Confidence            356666665322   13458999999999999999998   56799999999999754 5999999999999994 4555


Q ss_pred             cceeeecceEEEeCCEE----EEEEEEecC-CCC----cceeEEEeeCCC---C----CCCCCCCCCCCCCCccceeEec
Q 015780          124 LSFQVPNISATLEGNQW----TIFATLQLT-NNL----LSTNQVWQEGPM---N----GDTPGAHAMSGDNARSVGTIDF  187 (400)
Q Consensus       124 ~~~~l~~~s~~~~~g~~----~~~f~~~l~-~~~----~~~~~IwA~G~~---~----~~~l~~H~~~g~n~~s~~~ldl  187 (400)
                      ..++++..++ ..++++    +|..|.+|+ ++.    +...++||.++.   +    +..+.+|+.+     +.+.+||
T Consensus        98 a~~t~L~gs~-vn~t~~t~~~rC~nC~~W~~gg~~~~t~~~~~~wA~~~~~~~~p~~~~a~i~~Hd~~-----G~f~~dl  171 (184)
T cd00241          98 ATITQLPSSS-VNSTHWKLVFRCQNCTSWNNGGGIDPTSQGVLAWAFSNVAVDDPSDPQSTFSEHTDF-----GFFGINL  171 (184)
T ss_pred             ceEEECCCCc-EeCCEEEEEEEeCCCcccCCCCccCcCCCceEEEEECCCCCCCCCCcccCCceecCC-----cceeEec
Confidence            5677776554 357766    466677786 321    222689998621   1    5679999855     4589999


Q ss_pred             ccC
Q 015780          188 RTG  190 (400)
Q Consensus       188 ~~g  190 (400)
                      ...
T Consensus       172 ~~A  174 (184)
T cd00241         172 SDA  174 (184)
T ss_pred             hhc
Confidence            854

It is a hemoflavoenzyme that is comprised of a b-type cytochrome domain linked to a large flavodehydrogenase domain. The 2 domains can be separated proteolytically. The cytochrome domain folds as a beta sandwich and complexes a heme molecule.

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=99.29  E-value=8.5e-12  Score=102.63  Aligned_cols=88  Identities=22%  Similarity=0.392  Sum_probs=75.4

Q ss_pred             cccchhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcccCCCCC-Cccccc
Q 015780          201 SRRRRRNTHGVLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGI-KYNKHR  279 (400)
Q Consensus       201 ~~~~~~~~Hg~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~-~~~~H~  279 (400)
                      +.+...++|+++|.++|++++|+|+++.+. |      .   ++|..+|++.+++.++|+.++....++.+++ .++.|.
T Consensus        13 ~~~~~l~~Hi~lm~la~~il~Pi~lvL~~~-~------s---r~~~~~q~~~~~l~~~g~~~g~~~~~~~p~lyp~n~H~   82 (105)
T PF10348_consen   13 PHRSALYAHIVLMTLAWVILYPIGLVLGNA-R------S---RWHLPVQTVFLVLMILGLFLGSVYNGSTPDLYPNNAHG   82 (105)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHc-c------c---hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            356789999999999999999999998664 2      2   3499999999999999999998876665444 579999


Q ss_pred             chhHHHHHHHHHHHhheee
Q 015780          280 NIGIALFAIGTLQMFAMLL  298 (400)
Q Consensus       280 ~lG~~~~~l~~~Q~l~~~~  298 (400)
                      ++|.++++++++|++.+++
T Consensus        83 k~g~il~~l~~~q~~~gv~  101 (105)
T PF10348_consen   83 KMGWILFVLMIVQVILGVI  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987764

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>KOG3568 consensus Dopamine beta-monooxygenase [Amino acid transport and metabolism]

Probab=99.17  E-value=2e-10  Score=113.83  Aligned_cols=131  Identities=15%  Similarity=0.192  Sum_probs=98.7

Q ss_pred             ccccccccCCCC-CeEEEEEEecCCCeEEEEEEEecCCCCceEEEEeCCCCCCCCCCcEEEEEECCCCCeEEEEeecCCC
Q 015780           37 KVYSTCTDLPVL-NSFLHWNYDQSTNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSG  115 (400)
Q Consensus        37 ~~~~~C~~l~~~-~~~l~W~~~~~~~~i~i~~~~~~~~~~gWvA~Gfs~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~  115 (400)
                      ..|.....++.. .++|+|.++...+.++|.++..   +.+|++||||+.|. |.+||+++.|.+ .+...+.|+|.+..
T Consensus        31 s~~~~h~~~~~e~~~~lsW~vdy~~q~i~F~l~~~---t~~~v~fGfSdrG~-lanaDivv~~n~-g~~~~~~DayTn~d  105 (603)
T KOG3568|consen   31 STYPHHTLLDSEGKYWLSWSVDYRGQQIAFRLQVR---TAGYVGFGFSDRGA-LANADIVVGGNA-GGRPYLQDAYTNAD  105 (603)
T ss_pred             CCccceeeecCCCcEEEEEeeccccceeEEEEEec---cCCEEEEecCCcCC-cccCcEEEEecc-CCchhhhhhhcCCC
Confidence            456677765555 4899999988888877777664   78999999999998 999999999985 45689999999888


Q ss_pred             CCCCCCCCcceeeecceEEEeCCEEEEEEEEecCCC--------CcceeEEEeeCCCC--CCCCCCCCC
Q 015780          116 SPTLQPGSLSFQVPNISATLEGNQWTIFATLQLTNN--------LLSTNQVWQEGPMN--GDTPGAHAM  174 (400)
Q Consensus       116 ~~p~~d~~~~~~l~~~s~~~~~g~~~~~f~~~l~~~--------~~~~~~IwA~G~~~--~~~l~~H~~  174 (400)
                      .+-..|.++|++++..  ......+++.|+|++.+=        ++++.++||.-...  +....+|+.
T Consensus       106 ~qi~~D~QQDyqll~~--~e~~~~~~i~frRkl~TCDp~Dy~i~dgTv~vv~a~~eed~r~l~~v~~~~  172 (603)
T KOG3568|consen  106 GQIKKDAQQDYQLLYA--MENSTHTIIEFRRKLHTCDPNDYSITDGTVRVVWAYLEEDARELGPVYHDS  172 (603)
T ss_pred             CceecchhhhhHHHhh--hccCCccEEEEecccCcCCccceeccCCeEEEEEEEeccchhhcccccccc
Confidence            8888888888888742  222234568899998872        47889999965432  334445554

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=96.21  E-value=0.039  Score=50.21  Aligned_cols=97  Identities=14%  Similarity=0.049  Sum_probs=65.3

Q ss_pred             CcchhhhhHhHHHHHHHHHH-HHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHH
Q 015780          238 NPAWFYLHVACQASGYIVGV-AGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWS  316 (400)
Q Consensus       238 ~~~Wf~~H~~~q~~~~~~~i-~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~  316 (400)
                      ....++.|..++++++.+.. +|..++-+.....+.+ ...|..+=++.+++.++=...++... +  +.+..++..|.+
T Consensus        32 ~~~~~~~Hg~lm~iaw~~l~p~gil~ar~~~~~~~~~-~~~H~~~q~~~~~~~i~g~~~~~~~~-~--~~~~~~~~~H~~  107 (191)
T cd08760          32 SDTLIKAHGVLMAIAWGILMPIGALLARYFLLGDPVW-FYLHAGLQLLAVLLAIAGFVLGIVLV-Q--GGGGSLNNAHAI  107 (191)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh-HHHHHHHHHHHHHHHHHHHHHHHHhh-c--cCCCCCcCcchh
Confidence            34568999999999988765 4554442221112223 36898888776666665554444322 1  224557789999


Q ss_pred             HHHHHHHHHHHHHHHcccccCC
Q 015780          317 LGYSVIVLSIINIFEGFDILDP  338 (400)
Q Consensus       317 ~G~~~~~lg~~ni~~Gl~l~~~  338 (400)
                      +|.+++++.++|...|+.....
T Consensus       108 lGl~~~~l~~lQ~~~G~~~~~~  129 (191)
T cd08760         108 LGIIVLALAILQPLLGLLRPHP  129 (191)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999876543

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=96.12  E-value=0.048  Score=47.44  Aligned_cols=94  Identities=15%  Similarity=0.119  Sum_probs=66.1

Q ss_pred             hhhhhHhHHHHHHHHHHHHHhhhhhccc-CCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHH
Q 015780          241 WFYLHVACQASGYIVGVAGWGTGIKLGN-DSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGY  319 (400)
Q Consensus       241 Wf~~H~~~q~~~~~~~i~g~~l~~~~~~-~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~  319 (400)
                      =|.+|..+|++|+++...--++.+.... .++......|.++.++.+++.++=....+...++ .+ .+-+...|-|+|.
T Consensus         6 ~Fn~HP~lm~~G~i~l~geaiL~~~~~~~~~k~~~k~~H~~L~~la~~~~~~Gl~av~~~h~~-~~-~~hf~SlHswlGl   83 (143)
T cd08763           6 QFNVHPLCMVLGLVFLCGEALLVYRVFRNETKRSTKILHGLLHIMALVISLVGLVAVFDYHQA-NG-YPDMYSLHSWCGI   83 (143)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHccc-cC-CCccccHHHHHHH
Confidence            4789999999999987765555554322 1222234689999999998887665544422222 22 3446779999999


Q ss_pred             HHHHHHHHHHHHccccc
Q 015780          320 SVIVLSIINIFEGFDIL  336 (400)
Q Consensus       320 ~~~~lg~~ni~~Gl~l~  336 (400)
                      +++++-..|...|+...
T Consensus        84 ~t~~L~~lQ~~~G~~~f  100 (143)
T cd08763          84 LTFVLYFLQWLIGFSFF  100 (143)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999997653

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=96.10  E-value=0.041  Score=46.77  Aligned_cols=94  Identities=18%  Similarity=0.175  Sum_probs=61.0

Q ss_pred             hhHhHHHHHHHHHHH-HHhhhhhcccC-CCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHHH
Q 015780          244 LHVACQASGYIVGVA-GWGTGIKLGND-SPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSV  321 (400)
Q Consensus       244 ~H~~~q~~~~~~~i~-g~~l~~~~~~~-~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~  321 (400)
                      +|..++++++++... |..+.-..... .+......|.++.++.+++.++=...++...++.+  ++-++..|.++|.++
T Consensus         1 ~H~~lm~~~f~~l~p~gil~~r~~~~~~~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~~~~~--~~~~~s~H~~lGl~~   78 (129)
T smart00665        1 LHPVLMILGFGFLMGEAILVARPLTRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISHNESG--IANFYSLHSWLGLAA   78 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC--CCCccchhHHHHHHH
Confidence            489999999866554 44333211111 11122468999988887777665544443322211  345778999999999


Q ss_pred             HHHHHHHHHHcccccCCC
Q 015780          322 IVLSIINIFEGFDILDPE  339 (400)
Q Consensus       322 ~~lg~~ni~~Gl~l~~~~  339 (400)
                      +++..+|...|+.....+
T Consensus        79 ~~l~~~Q~~~G~~~~~~~   96 (129)
T smart00665       79 FVLAGLQWLSGFLRPLPP   96 (129)
T ss_pred             HHHHHHHHHHHHHHhcCC
Confidence            999999999998866443

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=96.04  E-value=0.041  Score=46.86  Aligned_cols=93  Identities=15%  Similarity=0.173  Sum_probs=62.6

Q ss_pred             hhhhHhHHHHHHHHHHHHHhhhhhcccC-CCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHH
Q 015780          242 FYLHVACQASGYIVGVAGWGTGIKLGND-SPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYS  320 (400)
Q Consensus       242 f~~H~~~q~~~~~~~i~g~~l~~~~~~~-~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~  320 (400)
                      |..|..++++++++...--++.....+. .+......|..+.++.+++.++=....+.....  +.++-+...|.++|.+
T Consensus         2 f~~H~~lm~~g~~~l~~~~il~~r~~~~~~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~~~--~~~~h~~s~Hs~lGl~   79 (131)
T cd08554           2 FNWHPLLMVIGFVFLMGEALLVYRVFRLLTKRALKLLHAILHLLAFVLGLVGLLAVFLFHNA--GGIANLYSLHSWLGLA   79 (131)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cCcccchhHHHHHHHH
Confidence            4679999999987655443344333211 111224689999998888777665544433222  1234466789999999


Q ss_pred             HHHHHHHHHHHccccc
Q 015780          321 VIVLSIINIFEGFDIL  336 (400)
Q Consensus       321 ~~~lg~~ni~~Gl~l~  336 (400)
                      ++++..+|...|+...
T Consensus        80 ~~~l~~~q~~~G~~~~   95 (131)
T cd08554          80 TVLLFLLQFLSGFVLF   95 (131)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999997764

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>PF13301 DUF4079: Protein of unknown function (DUF4079)

Probab=95.87  E-value=0.088  Score=47.38  Aligned_cols=88  Identities=16%  Similarity=0.090  Sum_probs=54.3

Q ss_pred             hhhHhHHHHHHHHHHHHHhhhhh---cccCCCCCCcccccchhHHHHHHHHHHHhhe-eeccCCCCCCcccchhhhHHHH
Q 015780          243 YLHVACQASGYIVGVAGWGTGIK---LGNDSPGIKYNKHRNIGIALFAIGTLQMFAM-LLRPKPDHKYRLYWNIYHWSLG  318 (400)
Q Consensus       243 ~~H~~~q~~~~~~~i~g~~l~~~---~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~-~~rp~~~~~~r~~~~~~H~~~G  318 (400)
                      ..|.-.-...+.++..+..-|..   ..+  +....++|-+.|+.+..|+.++.... .+.+.+    ++.+...|..++
T Consensus        81 ~~H~~~g~~ll~~~~L~~lGG~~~~~~~~--~~lf~spH~~~Gl~~~~L~~~s~al~~~i~~g~----~~~~R~lHi~lN  154 (175)
T PF13301_consen   81 DRHYRLGFALLAFMGLGALGGQLGTYRQN--GKLFWSPHLWAGLAVVGLMAFSAALVPQIQKGN----RPWARRLHIYLN  154 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHcchHHHHHcC--CCCccCchHHHHHHHHHHHHHHHHHHHHHccCC----chhHHHHHHHHH
Confidence            45655544444443333333322   222  22346889999999998888885332 232222    345667999999


Q ss_pred             HHHHHHHHHHHHHccccc
Q 015780          319 YSVIVLSIINIFEGFDIL  336 (400)
Q Consensus       319 ~~~~~lg~~ni~~Gl~l~  336 (400)
                      .+++++-..+..+|..+.
T Consensus       155 ~~~l~Lf~~q~itG~~il  172 (175)
T PF13301_consen  155 SLALLLFAWQAITGWRIL  172 (175)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999887653

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=95.78  E-value=0.082  Score=49.08  Aligned_cols=97  Identities=13%  Similarity=0.034  Sum_probs=64.1

Q ss_pred             cchhhhhHhHHHHHHHHHHHHHhhhhhcccCC-CCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHH
Q 015780          239 PAWFYLHVACQASGYIVGVAGWGTGIKLGNDS-PGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSL  317 (400)
Q Consensus       239 ~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~-~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~  317 (400)
                      ...|.+|..+|++|+++...=-++.+...... +......|..+..+.+++.++=....+-..++..+..+-+...|-|+
T Consensus        21 ~~~Fn~HP~lM~~Gfi~l~geAiLvyr~~~~~~k~~~k~~H~~L~~lAl~~~ivGl~avf~~hn~~~~~~~hfySlHSwl  100 (214)
T cd08764          21 GLQFNWHPLLMVLGLIFLYGNSILVYRVFRNTRKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPIPNMYSLHSWL  100 (214)
T ss_pred             CceEeecHHHHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHHHH
Confidence            35799999999999977655444544433211 11123489999999988887664443321122111223355689999


Q ss_pred             HHHHHHHHHHHHHHcccc
Q 015780          318 GYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       318 G~~~~~lg~~ni~~Gl~l  335 (400)
                      |.+++++-..|...|+..
T Consensus       101 Gl~t~~L~~lQ~~~Gf~~  118 (214)
T cd08764         101 GLTAVILFSLQWVGGFVS  118 (214)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999743

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=95.78  E-value=0.062  Score=46.81  Aligned_cols=93  Identities=17%  Similarity=0.157  Sum_probs=62.0

Q ss_pred             chhhhhHhHHHHHHHHHHHHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHH
Q 015780          240 AWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGY  319 (400)
Q Consensus       240 ~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~  319 (400)
                      ..|.+|..+|++|+++...=-++.+.....++......|.++=++.+++.++=....+ +.+...+ .+-+..+|-|+|.
T Consensus         6 ~~Fn~HP~lM~~gfi~l~~eAiL~~r~~~~~k~~~k~iH~~l~~la~~~~vvGl~avf-~~~~~~~-~~~~~SlHSwlGl   83 (144)
T cd08766           6 LIFNVHPVLMVIGFIFLAGEAILAYKTVPGSREVQKAVHLTLHLVALVLGIVGIYAAF-KFHNEVG-IPNLYSLHSWLGI   83 (144)
T ss_pred             ceeeccHHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHhcccC-ccccccHHHHHHH
Confidence            4689999999999877665445555543222222245888887777776665543333 2222222 2335568999999


Q ss_pred             HHHHHHHHHHHHccc
Q 015780          320 SVIVLSIINIFEGFD  334 (400)
Q Consensus       320 ~~~~lg~~ni~~Gl~  334 (400)
                      +++++-..|...|+.
T Consensus        84 ~t~~L~~lQ~~~G~~   98 (144)
T cd08766          84 GTISLFGLQWLFGFV   98 (144)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999975

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=95.55  E-value=0.084  Score=47.78  Aligned_cols=95  Identities=13%  Similarity=0.176  Sum_probs=65.3

Q ss_pred             cchhhhhHhHHHHHHHHHHHHHhhhhhcccC----CCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhh
Q 015780          239 PAWFYLHVACQASGYIVGVAGWGTGIKLGND----SPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYH  314 (400)
Q Consensus       239 ~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~----~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H  314 (400)
                      ...|.+|..+|.+++.+....-++.+...+.    ++......|.++-++.+++.++=....+.- +. .+.++-++-.|
T Consensus        18 ~~~f~~Hp~~m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~-~~-~~~~~hf~s~H   95 (183)
T cd08761          18 TSLFSWHPLLMSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYN-KE-RNGKPHFTSWH   95 (183)
T ss_pred             cceeehhHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-cc-cCCCCCccchh
Confidence            3468999999999998877665555442211    122224689999998888776554333322 21 12244567789


Q ss_pred             HHHHHHHHHHHHHHHHHcccc
Q 015780          315 WSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       315 ~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      .|+|.+++++...|...|+..
T Consensus        96 ~~lGl~~~~l~~~Q~~~G~~~  116 (183)
T cd08761          96 GILGLVTVILIVLQALGGLAL  116 (183)
T ss_pred             HHHHHHHHHHHHHHHHHhHHH
Confidence            999999999999999999854

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=95.46  E-value=0.3  Score=43.96  Aligned_cols=97  Identities=13%  Similarity=0.069  Sum_probs=63.0

Q ss_pred             CcchhhhhHhHHHHHHHHHHHHHhhhhhccc-C--CCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhh
Q 015780          238 NPAWFYLHVACQASGYIVGVAGWGTGIKLGN-D--SPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYH  314 (400)
Q Consensus       238 ~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~-~--~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H  314 (400)
                      ++..|.+|-.+|++|+++...=.++.+.... +  ++...+..|..+=.+.+++.++-....+ +.+...+ .+-...+|
T Consensus        31 ~~~~Fn~HP~lMv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf-~~hn~~~-~~nlySlH  108 (179)
T cd08762          31 SSKNFNWHPVLMVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVF-NFHNVHH-TANLYSLH  108 (179)
T ss_pred             CCCceeehHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HhccccC-ccchhhHH
Confidence            3447999999999999987544445444221 1  1112246788887777777665544433 2222222 22234479


Q ss_pred             HHHHHHHHHHHHHHHHHccccc
Q 015780          315 WSLGYSVIVLSIINIFEGFDIL  336 (400)
Q Consensus       315 ~~~G~~~~~lg~~ni~~Gl~l~  336 (400)
                      -|+|..++++-..|...|+...
T Consensus       109 SWlGl~t~~Lf~lQ~~~Gf~~f  130 (179)
T cd08762         109 SWVGICTVALFTCQWVMGFTSF  130 (179)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998654

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=95.32  E-value=0.11  Score=44.36  Aligned_cols=91  Identities=13%  Similarity=0.201  Sum_probs=59.5

Q ss_pred             hhHhHHHHHHHHHHHHHhhhhhcc-c--CCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHH
Q 015780          244 LHVACQASGYIVGVAGWGTGIKLG-N--DSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYS  320 (400)
Q Consensus       244 ~H~~~q~~~~~~~i~g~~l~~~~~-~--~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~  320 (400)
                      +|..++++|+.+...--++..... .  ..+......|.++-++.+++.++=....+.....  +...-++..|.++|.+
T Consensus         1 ~H~~lm~~~f~~l~~~~il~~r~~~~~~~~~~~~~~~H~~lq~l~~~~~~~G~~~~~~~~~~--~~~~h~~s~H~~lG~~   78 (137)
T PF03188_consen    1 WHPILMTIGFVFLMPEGILAARYNPFRRKSRKWWFRIHWILQVLALVFAIIGFVAIFINKNR--NGKPHFKSWHSILGLA   78 (137)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cCCCCCCCchhhhhHH
Confidence            499999999887664333333321 1  1112224689988887777666655444332111  1234567799999999


Q ss_pred             HHHHHHHHHHHccccc
Q 015780          321 VIVLSIINIFEGFDIL  336 (400)
Q Consensus       321 ~~~lg~~ni~~Gl~l~  336 (400)
                      ++++.+.|...|+...
T Consensus        79 ~~~l~~~Q~~~G~~~~   94 (137)
T PF03188_consen   79 TFVLALLQPLLGFFRF   94 (137)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998764

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>PLN02680 carbon-monoxide oxygenase

Probab=95.26  E-value=0.14  Score=48.02  Aligned_cols=93  Identities=16%  Similarity=0.156  Sum_probs=61.9

Q ss_pred             hhhhhHhHHHHHHHHHHHHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHH
Q 015780          241 WFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYS  320 (400)
Q Consensus       241 Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~  320 (400)
                      =|.+|-.+|++|+++...-.++.+.....++......|..+=.+.+++.++-.... ++.+...+ +.-+..+|-|+|.+
T Consensus        46 ~Fn~HPlLM~~Gfi~l~geAIL~yr~~~~~k~~~K~iH~~L~~lA~~l~vvGl~av-fk~hn~~~-~~nfySlHSWlGl~  123 (232)
T PLN02680         46 IFNVHPVLMVIGLVLLNGEAMLAYKTVPGTKNLKKLVHLTLQFLAFCLSLIGVWAA-LKFHNEKG-IDNFYSLHSWLGLA  123 (232)
T ss_pred             eEechHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHhccccC-ccccccHHHHHHHH
Confidence            47899999999999966545555443222222334578877777777665544332 33322222 33455689999999


Q ss_pred             HHHHHHHHHHHcccc
Q 015780          321 VIVLSIINIFEGFDI  335 (400)
Q Consensus       321 ~~~lg~~ni~~Gl~l  335 (400)
                      ++++-..|...|+..
T Consensus       124 t~iL~~lQ~~~Gf~~  138 (232)
T PLN02680        124 CLFLFSLQWAAGFVT  138 (232)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999765

>PLN02810 carbon-monoxide oxygenase

Probab=93.87  E-value=0.39  Score=44.84  Aligned_cols=92  Identities=20%  Similarity=0.103  Sum_probs=62.4

Q ss_pred             hhhhhHhHHHHHHHHHHHHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHH
Q 015780          241 WFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYS  320 (400)
Q Consensus       241 Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~  320 (400)
                      =|.+|-.+|++|+++.-.=-++.+......+......|..+=.+.+++.++-....+ +.|...+ .+-.-.+|-|+|..
T Consensus        46 ~FN~HPvlMv~Gfi~l~geAIL~Yr~~~~~k~~~K~iH~~lh~~Al~l~vvGl~Avf-~~Hn~~~-i~nlySLHSWlGl~  123 (231)
T PLN02810         46 IFNLHPVLMLIGLIIIGGEAIMSYKSLPLKKEVKKLIHLVLHAIALILGIFGICAAF-KNHNESG-IANLYSLHSWLGIG  123 (231)
T ss_pred             eeeehHHHHHHHHHHHhhHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHH-HhccccC-CCceeeHHHHHHHH
Confidence            489999999999988766555555432212223346788877777776665544433 3332222 23355699999999


Q ss_pred             HHHHHHHHHHHccc
Q 015780          321 VIVLSIINIFEGFD  334 (400)
Q Consensus       321 ~~~lg~~ni~~Gl~  334 (400)
                      ++++-..|-..|+-
T Consensus       124 tv~Lf~lQw~~Gf~  137 (231)
T PLN02810        124 IISLYGIQWIYGFI  137 (231)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999983

>PLN02351 cytochromes b561 family protein

Probab=93.83  E-value=0.63  Score=43.84  Aligned_cols=94  Identities=15%  Similarity=0.069  Sum_probs=60.0

Q ss_pred             chhhhhHhHHHHHHHHHHHHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHH
Q 015780          240 AWFYLHVACQASGYIVGVAGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGY  319 (400)
Q Consensus       240 ~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~  319 (400)
                      ..|.+|-.+|++|+++...=-++.+.....++......|..+=.+.+++.++-...   ..+...+..+-.-..|-|+|.
T Consensus        49 iffn~HP~lMviGfi~L~geAILvYR~~~~~~k~~K~lH~~Lh~~Ali~~vvGl~a---~fh~~~~~i~nlySLHSWlGl  125 (242)
T PLN02351         49 VYAVLHPLLMVIGFILISGEAILVHRWLPGSRKTKKSVHLWLQGLALASGVFGIWT---KFHGQDGIVANFYSLHSWMGL  125 (242)
T ss_pred             eeecccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHH---HHhcccCCccchhHHHHHHHH
Confidence            33479999999999987665555555432222223457777766666655444333   222222212334557999999


Q ss_pred             HHHHHHHHHHHHccccc
Q 015780          320 SVIVLSIINIFEGFDIL  336 (400)
Q Consensus       320 ~~~~lg~~ni~~Gl~l~  336 (400)
                      .++++=.+|-..|+...
T Consensus       126 ~tv~Lf~lQwv~Gf~~F  142 (242)
T PLN02351        126 ICVSLFGAQWLTGFMSF  142 (242)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999997644

>KOG1619 consensus Cytochrome b [Energy production and conversion]

Probab=92.98  E-value=0.49  Score=44.27  Aligned_cols=121  Identities=15%  Similarity=0.132  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcc-cCCc-chhhhhHhHHHHHHHHHHHHHhhhhhc-ccCCCCCCcccccchhHHHHHHHH
Q 015780          214 AVSWGVLIPMGAMIARYLKVFK-TANP-AWFYLHVACQASGYIVGVAGWGTGIKL-GNDSPGIKYNKHRNIGIALFAIGT  290 (400)
Q Consensus       214 ~~aw~il~P~gil~aR~~k~~~-~~~~-~Wf~~H~~~q~~~~~~~i~g~~l~~~~-~~~~~~~~~~~H~~lG~~~~~l~~  290 (400)
                      .+++....-.+..+.-|...+. ..++ .=|.+|-.+|++|++..-.=.++.+.. ...++...+-.|..+=++.+++.+
T Consensus        25 l~G~i~v~lvl~W~~~yr~Glaw~~~~~~~fnlHP~lMviGfI~l~GeAiL~YR~~r~~~k~~~KliH~~LH~~Alvl~i  104 (245)
T KOG1619|consen   25 LLGFITVVLVLYWVNTYRGGLAWSSSPNKEFNLHPVLMVIGFIYLQGEAILIYRVFRYTSKKVSKLIHLGLHIIALVLAI  104 (245)
T ss_pred             HHHHHHHHHHHHHHHHcCCccCCCCCcchhcCcchHHHHHHHHHhccceeeeeehhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444444444433231 1222 348899999999888744322333333 233333445689888888888877


Q ss_pred             HHHhheeeccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHccccc
Q 015780          291 LQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDIL  336 (400)
Q Consensus       291 ~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~  336 (400)
                      +-....+...+..+ . .-+-.+|-|+|..++++=.+|-..|+--+
T Consensus       105 ~gl~avf~~hn~~~-i-~NfySLHSWlGl~~v~ly~~Q~v~GF~tf  148 (245)
T KOG1619|consen  105 IGLCAVFDSHNLVG-I-ANFYSLHSWLGLCVVILYSLQWVFGFFTF  148 (245)
T ss_pred             HHHHHHHHHhhhcC-c-cceeeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66555543222222 2 22456999999999999999999997654

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=92.67  E-value=0.79  Score=40.34  Aligned_cols=94  Identities=15%  Similarity=0.109  Sum_probs=58.8

Q ss_pred             hhhhhHhHHHHHHHHHHHHHhhhhhcc-c--CCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHH
Q 015780          241 WFYLHVACQASGYIVGVAGWGTGIKLG-N--DSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSL  317 (400)
Q Consensus       241 Wf~~H~~~q~~~~~~~i~g~~l~~~~~-~--~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~  317 (400)
                      =|.+|-.+|++|+++.-.=.++.+... .  .++......|.++=.+.+++.++=....+ ..+...+ .+-+...|-|+
T Consensus        11 ~Fn~HPlLm~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf-~~hn~~~-~~~fySlHSwl   88 (153)
T cd08765          11 EFNWHPVLMVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVF-VFHNAKN-IPNMYSLHSWV   88 (153)
T ss_pred             eeechHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH-HHccccC-CCccccHHHHH
Confidence            478999999999888444334443311 0  11222245777766666655554433322 2222222 34466799999


Q ss_pred             HHHHHHHHHHHHHHccccc
Q 015780          318 GYSVIVLSIINIFEGFDIL  336 (400)
Q Consensus       318 G~~~~~lg~~ni~~Gl~l~  336 (400)
                      |.+++++-..|...|+..+
T Consensus        89 Gl~t~~l~~lQ~~~Gf~~f  107 (153)
T cd08765          89 GLAAVILYPLQLVLGISVY  107 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997655

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=92.21  E-value=0.25  Score=44.08  Aligned_cols=93  Identities=14%  Similarity=0.077  Sum_probs=59.9

Q ss_pred             hhhHhHHHHHHHHHHHHHhhhhh----cccCC-CCCCcccccchhHHHHHHHHHHHhheeec------------------
Q 015780          243 YLHVACQASGYIVGVAGWGTGIK----LGNDS-PGIKYNKHRNIGIALFAIGTLQMFAMLLR------------------  299 (400)
Q Consensus       243 ~~H~~~q~~~~~~~i~g~~l~~~----~~~~~-~~~~~~~H~~lG~~~~~l~~~Q~l~~~~r------------------  299 (400)
                      ..|+..-++-+++.+.|+.+...    ..... .......|.++|++.+++.++..+..+.+                  
T Consensus        10 ~~Hw~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (188)
T PF00033_consen   10 LLHWLNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQIPQYR   89 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHHHhh
Confidence            46877766666666777766422    11111 11124789999999999999888766555                  


Q ss_pred             cC--CCCCCcccchhhhHHHHHHHHHHHHHHHHHcccc
Q 015780          300 PK--PDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDI  335 (400)
Q Consensus       300 p~--~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l  335 (400)
                      +.  ++.+.....|...++.-.+++++..+.+.+|+.+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~~  127 (188)
T PF00033_consen   90 LFPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLIM  127 (188)
T ss_dssp             TT-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11  1122344567888888889999999999999888

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>COG2717 Predicted membrane protein [Function unknown]

Probab=90.63  E-value=4.2  Score=37.57  Aligned_cols=132  Identities=14%  Similarity=0.137  Sum_probs=70.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhcc---cCC---CCCCcccccchhHH
Q 015780          211 VLNAVSWGVLIPMGAMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLG---NDS---PGIKYNKHRNIGIA  284 (400)
Q Consensus       211 ~lm~~aw~il~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~---~~~---~~~~~~~H~~lG~~  284 (400)
                      -..++.|..++=.....+|+.+     .+.+.++=+.+-+.++..++.=+..-+...   +-+   .+..+.+=-.+|++
T Consensus        48 g~~al~fLl~~la~tp~~~~~~-----~~~l~~~Rr~LGl~af~~~~lH~~~Y~~~~l~~~~~~~~~d~~~rpyitiG~i  122 (209)
T COG2717          48 GIWALIFLLVTLAVTPLARLLK-----QPKLIRIRRALGLWAFFYALLHFTAYLVLDLGLDLALLGLDLLKRPYITIGMI  122 (209)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHhhHHHHHhHHHHHHHH
Confidence            3444555555555556667654     355666777777777666554332211110   000   11123455577877


Q ss_pred             HHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccccCCCCcchhHHHHHHHHH
Q 015780          285 LFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFL  353 (400)
Q Consensus       285 ~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~~~~~~~~~~~~~~~~~~  353 (400)
                      .+++++.-.+..+---.++-.  +.|+.+|++ +|.++++|.+=...+...   +..+.+.|.++.+++
T Consensus       123 aflll~pLalTS~k~~~rrlG--~rW~~LHrL-vYl~~~L~~lH~~~s~K~---~~~~~vlY~ii~~~l  185 (209)
T COG2717         123 AFLLLIPLALTSFKWVRRRLG--KRWKKLHRL-VYLALILGALHYLWSVKI---DMPEPVLYAIIFAVL  185 (209)
T ss_pred             HHHHHHHHHHHhhHHHHHHHH--HHHHHHHHH-HHHHHHHHHHHHHHhcCc---cchHHHHHHHHHHHH
Confidence            777776555543311111111  459999986 688888888888874432   223345565444433

>PF10067 DUF2306: Predicted membrane protein (DUF2306); InterPro: IPR018750 Members of this family of hypothetical bacterial proteins have no known function

Probab=90.47  E-value=0.85  Score=37.25  Aligned_cols=31  Identities=19%  Similarity=0.076  Sum_probs=25.7

Q ss_pred             cccchhhhHHHHHHHHHHHHHHHHHcccccC
Q 015780          307 RLYWNIYHWSLGYSVIVLSIINIFEGFDILD  337 (400)
Q Consensus       307 r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~~  337 (400)
                      |+.....|+++||+-+++..+....|+.+..
T Consensus         2 R~k~~~~HR~lGrvyv~~~~~~a~sa~~i~~   32 (103)
T PF10067_consen    2 RRKGPRLHRWLGRVYVAAMLISALSALFIAF   32 (103)
T ss_pred             CCCcccHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence            3445679999999999999999999988764

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=89.68  E-value=1.9  Score=35.46  Aligned_cols=88  Identities=19%  Similarity=0.261  Sum_probs=52.2

Q ss_pred             CCcchhhhhHhHHHHHHHHHH-HHHhhhhhcccCCCCCCcccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhH
Q 015780          237 ANPAWFYLHVACQASGYIVGV-AGWGTGIKLGNDSPGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHW  315 (400)
Q Consensus       237 ~~~~Wf~~H~~~q~~~~~~~i-~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~  315 (400)
                      +.+..++.|..+|++++++.. +|++++...   +     ++|.-.=++-+++.++-.+.+.....+ .+ .-+.+-.|.
T Consensus        13 ~~~~~l~~Hi~lm~la~~il~Pi~lvL~~~~---s-----r~~~~~q~~~~~l~~~g~~~g~~~~~~-~p-~lyp~n~H~   82 (105)
T PF10348_consen   13 PHRSALYAHIVLMTLAWVILYPIGLVLGNAR---S-----RWHLPVQTVFLVLMILGLFLGSVYNGS-TP-DLYPNNAHG   82 (105)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHcc---c-----hHHHHHHHHHHHHHHHHHHHHHHHhcC-CC-CCCCCCHHH
Confidence            356678999999999876644 466655332   1     223332222222222222222221111 11 135688999


Q ss_pred             HHHHHHHHHHHHHHHHccc
Q 015780          316 SLGYSVIVLSIINIFEGFD  334 (400)
Q Consensus       316 ~~G~~~~~lg~~ni~~Gl~  334 (400)
                      -+|++++++.++|..+|+.
T Consensus        83 k~g~il~~l~~~q~~~gv~  101 (105)
T PF10348_consen   83 KMGWILFVLMIVQVILGVI  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999874

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>COG5658 Predicted integral membrane protein [Function unknown]

Probab=87.59  E-value=2.6  Score=38.70  Aligned_cols=68  Identities=10%  Similarity=0.053  Sum_probs=44.8

Q ss_pred             CCcccchhhhHHHHHHHHHHHHHHHHHcccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015780          305 KYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEKKWKRAYIGILIFLGAVAALLEAITWVIVLKRK  372 (400)
Q Consensus       305 ~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~~~~~~~~~~~~~~~~~~~~~~i~lei~~w~~~~~~~  372 (400)
                      +.+..|++.|+++|-..++.+.+....+.....+..-+...+...++.+....+.+-+..|....+++
T Consensus        40 ~d~~~wk~a~~~l~pl~vi~gl~~~~~~~l~~~~~~~~~~v~~~~~~~Il~li~~ls~~l~~~g~d~~  107 (204)
T COG5658          40 PDQAMWKKAGLFLGPLLVIGGLVTRYMSLLAGGQGQMLLAVALFAAVLILFLILLLSAILVALGYDIP  107 (204)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            34567999999999999999999999998776665445555544444444434444444444444433

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=86.40  E-value=3.5  Score=36.55  Aligned_cols=129  Identities=17%  Similarity=0.087  Sum_probs=71.8

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHh---hhhcccCCcchhhhhHhHHHHHHHHHHHHHhhhhhc---------------
Q 015780          205 RRNTHGVLNAVSWGVLIPMGAMIARY---LKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKL---------------  266 (400)
Q Consensus       205 ~~~~Hg~lm~~aw~il~P~gil~aR~---~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~---------------  266 (400)
                      .+..| +++++++.+++..|..+...   ...........+.+|..+-.+-.++.+.=+...+..               
T Consensus         8 ~R~~H-w~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (188)
T PF00033_consen    8 TRLLH-WLNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQIP   86 (188)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSHH
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHH
Confidence            34555 47888999999999887521   111111234567899887665444433333333332               


Q ss_pred             ---cc-----CCCCCCcccccchhHHHHHHHHHHHhheeec--------cCC---CCCCcccchhhhHHHHHHHHHHHHH
Q 015780          267 ---GN-----DSPGIKYNKHRNIGIALFAIGTLQMFAMLLR--------PKP---DHKYRLYWNIYHWSLGYSVIVLSII  327 (400)
Q Consensus       267 ---~~-----~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~r--------p~~---~~~~r~~~~~~H~~~G~~~~~lg~~  327 (400)
                         ..     ......+...++.-++++.+++++++.|+..        +..   ....+.....+|.+.+.+++++-.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~~~~~~~~~~~~~~~~~~~~~~~~~~iH~~~~~ll~~~i~~  166 (188)
T PF00033_consen   87 QYRLFPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLIMLWFFWWPLPPWLLPPPGLAEWARLIHFILAYLLLAFIII  166 (188)
T ss_dssp             HHHTT-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHHC-----TTTTGGGS-HHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence               00     0111224566677777777778887766544        111   1123456777888888877776666


Q ss_pred             HHHHccc
Q 015780          328 NIFEGFD  334 (400)
Q Consensus       328 ni~~Gl~  334 (400)
                      =++..+.
T Consensus       167 Hi~~a~~  173 (188)
T PF00033_consen  167 HIYAAIF  173 (188)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6655543

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>PF13172 PepSY_TM_1: PepSY-associated TM helix

Probab=86.16  E-value=0.85  Score=29.37  Aligned_cols=30  Identities=20%  Similarity=0.394  Sum_probs=25.6

Q ss_pred             cccchhhhHHHHHHHHHHHHHHHHHccccc
Q 015780          307 RLYWNIYHWSLGYSVIVLSIINIFEGFDIL  336 (400)
Q Consensus       307 r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~  336 (400)
                      |+.+..+|+++|..+.+.-.+-+.+|+.+.
T Consensus         2 r~~~~~~H~~~g~~~~~~ll~~~lTG~~l~   31 (34)
T PF13172_consen    2 RKFWRKIHRWLGLIAAIFLLLLALTGALLN   31 (34)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            567888999999999999999888887664

>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ]

Probab=86.11  E-value=1.4  Score=38.05  Aligned_cols=56  Identities=16%  Similarity=0.142  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCccccccCCCCCCCCCCCCCCCC
Q 015780          345 AYIGILIFLGAVAALLEAITWVIVLKRKNG--NSVKHHHSINGANGANGYGARTQQGA  400 (400)
Q Consensus       345 ~~~~~~~~~~~~~i~lei~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (400)
                      .|++++.+.+.+.++.-.+.|...||||+.  -+++.-|.|+-.+-..=.|+-||.|+
T Consensus        31 m~tILiaIvVliiiiivli~lcssRKkKaaAAi~eediQfinpyqDqqw~~v~pqPgt   88 (189)
T PF05568_consen   31 MYTILIAIVVLIIIIIVLIYLCSSRKKKAAAAIEEEDIQFINPYQDQQWAGVTPQPGT   88 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhhhhhcccccCcccchhhccCCCCCCC
Confidence            344444444333444444557777776664  22445888988888888888888763

>PF13301 DUF4079: Protein of unknown function (DUF4079)

Probab=85.88  E-value=7.9  Score=34.85  Aligned_cols=70  Identities=19%  Similarity=0.117  Sum_probs=51.3

Q ss_pred             cccccchhHHHHHHHHHHHhheeeccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHcccccCCCC-cchhHH
Q 015780          275 YNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDPEK-KWKRAY  346 (400)
Q Consensus       275 ~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~~~~~-~~~~~~  346 (400)
                      ...|..+|..+++++.+-.++|..--...+  .+.+..-|-|.|..+..|=.++..+.-.+...++ .|..+-
T Consensus        80 r~~H~~~g~~ll~~~~L~~lGG~~~~~~~~--~~lf~spH~~~Gl~~~~L~~~s~al~~~i~~g~~~~~R~lH  150 (175)
T PF13301_consen   80 RDRHYRLGFALLAFMGLGALGGQLGTYRQN--GKLFWSPHLWAGLAVVGLMAFSAALVPQIQKGNRPWARRLH  150 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcchHHHHHcC--CCCccCchHHHHHHHHHHHHHHHHHHHHHccCCchhHHHHH
Confidence            478999999999999999888763111111  1255667999999999999999999988875433 455433

>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function

Probab=82.99  E-value=5  Score=38.73  Aligned_cols=83  Identities=24%  Similarity=0.343  Sum_probs=50.9

Q ss_pred             hHHHHHHHHHHHHHhhhhhccc---CCCCCCcccccchhHHHHHHHHHHHhheeec---cCCCCCCcccchhhhHHHHHH
Q 015780          247 ACQASGYIVGVAGWGTGIKLGN---DSPGIKYNKHRNIGIALFAIGTLQMFAMLLR---PKPDHKYRLYWNIYHWSLGYS  320 (400)
Q Consensus       247 ~~q~~~~~~~i~g~~l~~~~~~---~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~r---p~~~~~~r~~~~~~H~~~G~~  320 (400)
                      .+-.+..++.++|++-.+.+-.   +.+.+..--|-..|+...+-.++-.+.-+.|   ..-..|.|+.|.+       .
T Consensus       156 ~Liav~~~~~li~~iw~~~Ll~~~~~~p~y~VAGhVm~Gla~iCtsLIaLVAtI~RQirN~ys~~Er~~W~~-------l  228 (347)
T PF10951_consen  156 ILIAVPILCALIGWIWAIVLLSSSDEHPAYFVAGHVMFGLACICTSLIALVATIARQIRNTYSEKERWKWPK-------L  228 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCccceehhHHHhhHHHHHHHHHHHHHHHHHHHhccccHHHhhhhHH-------H
Confidence            4445677888888888877543   2233323568888888877666665555544   3334455666654       4


Q ss_pred             HHHHHHHHHHHccccc
Q 015780          321 VIVLSIINIFEGFDIL  336 (400)
Q Consensus       321 ~~~lg~~ni~~Gl~l~  336 (400)
                      ++++|-+++..|+...
T Consensus       229 Vl~mGsi~~l~Gl~vl  244 (347)
T PF10951_consen  229 VLVMGSISILWGLYVL  244 (347)
T ss_pred             HHHHhhHHHHhhhheE
Confidence            5566666666666554

>PF10361 DUF2434: Protein of unknown function (DUF2434); InterPro: IPR018830 This entry represents a family of proteins conserved in fungi

Probab=82.38  E-value=8.9  Score=37.02  Aligned_cols=112  Identities=16%  Similarity=0.253  Sum_probs=66.7

Q ss_pred             ccccchhHHHHHHHHHHHh-hee-eccC------CCCCCcccchhhhHHHHHHHHHHHHHHHHHcccccCC--CCcchh-
Q 015780          276 NKHRNIGIALFAIGTLQMF-AML-LRPK------PDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDILDP--EKKWKR-  344 (400)
Q Consensus       276 ~~H~~lG~~~~~l~~~Q~l-~~~-~rp~------~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~~~--~~~~~~-  344 (400)
                      ..|..+|+..-++..+-.+ ..+ +|.|      .+.+.+.+=..+-++...++.++|.+.++..++....  +...++ 
T Consensus        44 g~rg~vGI~fav~f~i~lvltLvnL~KHG~~~lp~eKRf~~iGRRwqWyW~~fv~a~~~iS~f~~IDVDR~yl~~~piil  123 (296)
T PF10361_consen   44 GTRGSVGIAFAVLFAIALVLTLVNLRKHGRLYLPLEKRFYPIGRRWQWYWMLFVCACGLISLFMSIDVDRYYLQGLPIIL  123 (296)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhcccccchhHHHHHHHHHHHHHHHhhheeeeecHHhcccccHHH
Confidence            6899999988777665543 222 2221      1112233334566678889999999999999887521  222233 


Q ss_pred             -HHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCCCccccccCCCCC
Q 015780          345 -AYIGILIFLGAVAALLEAIT-WVIVLKRKNGNSVKHHHSINGANGA  389 (400)
Q Consensus       345 -~~~~~~~~~~~~~i~lei~~-w~~~~~~~~~~~~~~~~~~~~~~~~  389 (400)
                       .+--++...+.++++-|..+ |-.+..|+--. +|+++ ....|-+
T Consensus       124 ~sfF~~l~~~~~lA~vWE~VRhWGSw~ERQ~id-~dpf~-~~~d~~R  168 (296)
T PF10361_consen  124 QSFFWYLMQPGTLAAVWEAVRHWGSWQERQFID-PDPFA-LRQDDRR  168 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhchhhhcccc-CCccc-cCcccce
Confidence             33344566666777778655 87776555444 77763 3344443

Their function is not known.

>PF01292 Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPro: IPR011577 Cytochrome b561 is an integral membrane and electron transport protein, that binds two haem groups non-covalently

Probab=80.53  E-value=20  Score=31.62  Aligned_cols=92  Identities=21%  Similarity=0.128  Sum_probs=50.2

Q ss_pred             hhhHhHHHHHHHHHHHHHhhhhhcccCCCC-CC--cccccchhHHHHHHHHHHHhhe---------------------ee
Q 015780          243 YLHVACQASGYIVGVAGWGTGIKLGNDSPG-IK--YNKHRNIGIALFAIGTLQMFAM---------------------LL  298 (400)
Q Consensus       243 ~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~-~~--~~~H~~lG~~~~~l~~~Q~l~~---------------------~~  298 (400)
                      ..|+..-+.-+++.+.|+.+-........+ ..  ...|.++|++++++.++=.+-.                     ..
T Consensus         8 ~~HW~~a~~~i~l~~tG~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (182)
T PF01292_consen    8 ILHWLNALSFIALIATGLWIHFPPPGLYFGDFGGVRNWHVIAGLLLFALLIFRLLWRWRRLFPWSDDVFFQVKNYLYFLL   87 (182)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccccccchHHhHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHh
Confidence            367776665556666665543322211111 11  4679999998888776655433                     12


Q ss_pred             ccCCCCCCcccchhhhHHHHHHHHHHHHHHHHHccccc
Q 015780          299 RPKPDHKYRLYWNIYHWSLGYSVIVLSIINIFEGFDIL  336 (400)
Q Consensus       299 rp~~~~~~r~~~~~~H~~~G~~~~~lg~~ni~~Gl~l~  336 (400)
                      +.+.+  .....+..-+..-.+.+++..+.+.+|+-++
T Consensus        88 ~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~iTG~~~~  123 (182)
T PF01292_consen   88 RGKPP--PAGKYNPGQKIVHWVLYLLLLLLPITGLLLW  123 (182)
T ss_pred             cCCCC--CCCcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21111  1122344444566667777777777887764

This domain is also found in a number of nickel-dependent hydrogenase subunits which are also B-type cytochromes that interact with quinones and anchor the hydrogenase to the membrane. Members of the 'eukaryotic cytochrome b561' family can be found in IPR004877 from INTERPRO.; GO: 0009055 electron carrier activity, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	400
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 6e-08
 Identities = 61/437 (13%), Positives = 123/437 (28%), Gaps = 154/437 (35%)

Query: 14  FVAALFASSY-----AQQTCGRQAFNNNKVYSTCTDLPVLNSFLHWNYDQSTNTVDLAFR 68
           FV  +   +Y       +T  RQ     ++Y    D   L     +N +Q     +++ R
Sbjct: 82  FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD--RL-----YNDNQVFAKYNVS-R 133

Query: 69  HTTTSSSRWVAWALNPS------GQRMAGS--QCLVA-------FQNSTGRPVAYTTPIG 113
                  R     L P+      G  + GS    +          Q      + +   + 
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDG--VLGSGKTWVALDVCLSYKVQCKMDFKIFWLN-LK 190

Query: 114 S-GSPT-----LQPGSLSFQV-PNISATLEG--------NQW-----TIFATLQLTNNLL 153
           +  SP      LQ   L +Q+ PN ++  +         +        +  +    N LL
Sbjct: 191 NCNSPETVLEMLQ--KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 154 STNQVWQEGPMNGDTPGAHAMSGDNARSVGTIDF--RTGQTTAGGGSSDSRRRRRNTHGV 211
               V                   NA++    +   +   TT     +D       TH  
Sbjct: 249 VLLNVQ------------------NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 212 LNAVSWGVLIPMG-AMIARYLKVFKTANPAWFYLHVACQASGYIVGVAGWGTGIKLGNDS 270
           L+  S  +      +++ +YL       P           +                   
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLP-----REVLTTN------------------- 326

Query: 271 PGIKYNKHRNIGIALFAIGTLQMFAMLLRPKPDHKYRLYWNIY----HWSLGYSVIVLSI 326
           P                +    + A  +R          W+ +       L  ++I  S+
Sbjct: 327 P--------------RRLS---IIAESIRDGLAT-----WDNWKHVNCDKLT-TIIESSL 363

Query: 327 INIFEGFDILDPEKKWKRAYIGILIFLGAV---AALLEAITW---------VIV------ 368
                  ++L+P  ++++ +  + +F  +      LL  + W         V+V      
Sbjct: 364 -------NVLEPA-EYRKMFDRLSVFPPSAHIPTILLS-LIWFDVIKSDVMVVVNKLHKY 414

Query: 369 --LKRKNGNSVKHHHSI 383
             ++++   S     SI
Sbjct: 415 SLVEKQPKESTISIPSI 431

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	400
1d7b_A	186	Cellobiose dehydrogenase; B-type cytochrome, Met/H	99.6

>1d7b_A Cellobiose dehydrogenase; B-type cytochrome, Met/His ligation, beta sandwich, Fe(II)- protoporphyrin IX, oxidoreductase; HET: NAG BMA HEM 1PG; 1.90A {Phanerochaete chrysosporium} SCOP: b.1.9.1 PDB: 1d7d_A* 1d7c_A* 1pl3_A*

Probab=99.60  E-value=1.4e-14  Score=130.10  Aligned_cols=135  Identities=16%  Similarity=0.205  Sum_probs=102.2

Q ss_pred             CCCeEEEEEEecCC----CeEEEEEEEecCCCCceEEEEeCCCCCCCCCCcEEEEEECCCCCeEEEEeecCCCCCCC-CC
Q 015780           47 VLNSFLHWNYDQST----NTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTL-QP  121 (400)
Q Consensus        47 ~~~~~l~W~~~~~~----~~i~i~~~~~~~~~~gWvA~Gfs~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~-~d  121 (400)
                      ..++.+.|.+..+.    +.-+|.++++.|.+.||+|||+   |.+|.|++|+|+|+++ |++++++|+.+||.+|. .+
T Consensus        22 ~~~~~f~~alP~~~~s~~~s~d~~~qi~~p~~~gW~g~g~---Gg~M~gs~l~v~w~~~-~~v~~S~R~a~g~~~P~~y~   97 (186)
T 1d7b_A           22 VHDVTYGFVFPPLATSGAQSTEFIGEVVAPIASKWIGIAL---GGAMNNDLLLVAWANG-NQIVSSTRWATGYVQPTAYT   97 (186)
T ss_dssp             TTTEEEEEEBCCCCSSSCCCCCEEEEEEEETTCCEEEEET---TSSSSSSCEEEEEEET-TEEEEEEEECSSSSCCEECC
T ss_pred             CCCEEEEEECCCcccCCCCCccEEEEEEccCCCCEEEEec---CCCCCCCcEEEEEeCC-CEEEEEEEEecCccCCCccC
Confidence            55688888875322    2357889998888899999999   4469999999999975 88999999999999997 77


Q ss_pred             CCcceeeecceEEEeCCEEEEEEEEe----c-CCC----CcceeEEEeeCCCC-------CCCCCCCCCCCCCCccceeE
Q 015780          122 GSLSFQVPNISATLEGNQWTIFATLQ----L-TNN----LLSTNQVWQEGPMN-------GDTPGAHAMSGDNARSVGTI  185 (400)
Q Consensus       122 ~~~~~~l~~~s~~~~~g~~~~~f~~~----l-~~~----~~~~~~IwA~G~~~-------~~~l~~H~~~g~n~~s~~~l  185 (400)
                      ++.+++++..++ ..++++++.|+++    + +.+    ++...+|||+++..       +..+.+|+.+     +.+.+
T Consensus        98 ~~~~~~lL~gs~-vn~t~~~~~f~C~~C~~w~~~g~~~~ts~~~~iwA~~~~~p~~~~~~~a~~~~H~~~-----G~~~~  171 (186)
T 1d7b_A           98 GTATLTTLPETT-INSTHWKWVFRCQGCTEWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTDF-----GFFGI  171 (186)
T ss_dssp             SSCEEEECTTCE-ECSSEEEEEEEEETTTBCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCSEE-----EEEEE
T ss_pred             CCceEEEccccc-EeCCEEEEEEEeCCCcccCCCCccccCCCCeEEEEECCCCCCCCCCCcccchhhhCc-----ceEEE
Confidence            777888887553 4678887766664    4 222    12238999997642       3578899864     56899


Q ss_pred             ecccCc
Q 015780          186 DFRTGQ  191 (400)
Q Consensus       186 dl~~g~  191 (400)
                      ||.+..
T Consensus       172 dL~~a~  177 (186)
T 1d7b_A          172 DYSTAH  177 (186)
T ss_dssp             EGGGCB
T ss_pred             Eccccc
Confidence            998543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	400
d1pl3a_	186	Cytochrome domain of cellobiose dehydrogenase {Fun	99.6

>d1pl3a_ b.1.9.1 (A:) Cytochrome domain of cellobiose dehydrogenase {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: CBD9-like
family: Cytochrome domain of cellobiose dehydrogenase
domain: Cytochrome domain of cellobiose dehydrogenase
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=99.60  E-value=8.1e-15  Score=129.73  Aligned_cols=134  Identities=15%  Similarity=0.174  Sum_probs=97.4

Q ss_pred             CCeEEEEEEecC----CCeEEEEEEEecCCCCceEEEEeCCCCCCCCCCcEEEEEECCCCCeEEEEeecCCCCCCC-CCC
Q 015780           48 LNSFLHWNYDQS----TNTVDLAFRHTTTSSSRWVAWALNPSGQRMAGSQCLVAFQNSTGRPVAYTTPIGSGSPTL-QPG  122 (400)
Q Consensus        48 ~~~~l~W~~~~~----~~~i~i~~~~~~~~~~gWvA~Gfs~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~-~d~  122 (400)
                      .+++....+..+    ++.-++.+++..|.+.||+||||+   .+|.|++|+|+|++ +|++++++|+.+||.+|. .+.
T Consensus        23 ~~~~~~~a~P~~~~~~~~~~d~i~qi~ap~~~GWvgiG~g---g~M~gs~l~V~w~~-~~~v~~S~R~atG~~~P~~~~~   98 (186)
T d1pl3a_          23 HDVTYGFVFPPLATSGAQSTEFIGEVVAPIASKWIGIALG---GAHNNDLLLVAWAN-GNQIVSSTRWATGYVQPTAYTG   98 (186)
T ss_dssp             TTEEEEEEBCCCCSSSCCCCCEEEEEEEETTCCEEEEETT---SSSSSSCEEEEEEE-TTEEEEEEEECSTTSCCEECCS
T ss_pred             CCEEEEEEeCCcccCCCCCcCEEEEEeCCCCCcEEEEEcC---CCCCCCcEEEEEec-CCeEEEEEEEecceeCCcccCC
Confidence            455555554321    234578999999999999999994   46999999999997 578999999999999996 455


Q ss_pred             CcceeeecceEEEeCCEEEEEEEEe----cCCC-----CcceeEEEeeCCCC-------CCCCCCCCCCCCCCccceeEe
Q 015780          123 SLSFQVPNISATLEGNQWTIFATLQ----LTNN-----LLSTNQVWQEGPMN-------GDTPGAHAMSGDNARSVGTID  186 (400)
Q Consensus       123 ~~~~~l~~~s~~~~~g~~~~~f~~~----l~~~-----~~~~~~IwA~G~~~-------~~~l~~H~~~g~n~~s~~~ld  186 (400)
                      ..+..++..+. .++++++..|+++    ++.+     +....+|||+++..       +..+.+|+.+     +.+++|
T Consensus        99 ~~~~~~l~~s~-vn~t~~~~~f~C~~C~~w~~~~~~~~~~~~~~iwA~~~~~p~~~~~~~~~i~~H~~~-----G~f~~d  172 (186)
T d1pl3a_          99 TATLTTLPETT-INSTHWKWVFRCQGCTEWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTDF-----GFFGID  172 (186)
T ss_dssp             SCEEEECTTCE-ECSSEEEEEEEEETCSBCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCSEE-----EEEEEE
T ss_pred             CceEEEccCce-EECCEEEEEEEEeccccccCCCcccCCCceEEEEEECCCCCCCCCCCccCcceecCC-----ceEEEE
Confidence            55566665444 4678877666554    3333     34567999998742       4678899754     569999


Q ss_pred             cccCc
Q 015780          187 FRTGQ  191 (400)
Q Consensus       187 l~~g~  191 (400)
                      |+++.
T Consensus       173 l~~a~  177 (186)
T d1pl3a_         173 YSTAH  177 (186)
T ss_dssp             GGGCB
T ss_pred             cccCc
Confidence            98654