Citrus Sinensis ID: 015804

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
MDVSELDRCFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVVIRKQNSS
ccccccccEEEcEEcccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHccccccEEEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccEEEEccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEcccccHHHHHHHHcccHHHHHccccccccccHHHHHHHHHHcccHHHcccccccccccHHHHHHHHccccccHHHHcccccccEEEEccccc
ccccccccEEEEEEEcccccHHHHHHHcccHHccccccHHHHcccccccccccccccccccHEccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHccccccccHHEEEcccccccHHHHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccEcccccccccccccccccccccEEEEEcccHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHcccEcccccccHHHHHHHHcccHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHccccHcHHHcHHHHHHHHHHHHHHHccEEEEccccc
mdvseldrcfvgelrkHEWTNAMLMELIKWERIfvepttencgfshcethlgehnihsacsdiisesgpipasvpcsmSVQRVLNALRKSVMQRSSLHTIFQAVICGrrqeeiapvavLFSGGLDSMILAALLNEcldpsyeidllnvsfdgqfapdRISAKAGLKELrgiaplrrWKLVEIdsdlsnltsETKHVMSLinpantymdLNIGIALWLAaggdgwvyegvtssndvdqQRVKYISKSRIilvgsgadeqcagygrhrtkykhgswvgldeEMKLDMQRIWKRnlgrddrccadngkearfpfldeDVIRTLldiplweianldqpsgtgdKKILREVAKMLGLyeaatlpkrAIQFGSRIAresnrknfgsnraanqasagsVVIRKQNSS
mdvseldrcfvgelrkhewtnAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLkelrgiaplrrwKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTssndvdqqRVKYISKsriilvgsgadeqcagygrhrtkykhgswvgldeeMKLDMQRIWKRNLGRDDRCCADNGkearfpfldedVIRTLLDIPLweianldqpsgtgdKKILREVAKMLGLyeaatlpkraIQFGSRIAResnrknfgsnraanqasagsvvirkqnss
MDVSELDRCFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVVIRKQNSS
******DRCFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFG**********************************
*************LRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGS*********************AG***IR*****
MDVSELDRCFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIARESNRK************************
***SELDRCFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEG**********RVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVVIRK****
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MDVSELDRCFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSDIISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVVIRKQNSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query400 2.2.26 [Sep-21-2011]
Q8JFW1612 Asparagine synthetase dom yes no 0.735 0.480 0.395 3e-58
Q8BFS9627 Asparagine synthetase dom yes no 0.697 0.444 0.396 2e-57
Q4R5D4643 Asparagine synthetase dom N/A no 0.635 0.395 0.408 5e-57
Q9NWL6643 Asparagine synthetase dom yes no 0.685 0.426 0.382 5e-57
Q0V8E4640 Asparagine synthetase dom yes no 0.687 0.429 0.394 6e-57
Q5ZJN0636 Asparagine synthetase dom yes no 0.63 0.396 0.421 9e-55
O74397548 Asparagine synthetase dom yes no 0.632 0.461 0.359 9e-42
Q5LJP9564 Asparagine synthetase dom yes no 0.615 0.436 0.356 2e-38
Q04489525 Asparagine synthetase dom yes no 0.657 0.500 0.357 4e-33
Q58516541 Putative asparagine synth yes no 0.56 0.414 0.262 2e-12
>sp|Q8JFW1|ASND1_DANRE Asparagine synthetase domain-containing protein 1 OS=Danio rerio GN=asnsd1 PE=2 SV=1 Back     alignment and function desciption
 Score =  226 bits (576), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/339 (39%), Positives = 192/339 (56%), Gaps = 45/339 (13%)

Query: 80  VQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDP 139
           V  +++ L ++V +R        A+     Q + A +A+LFSGG+DSMILAAL +  +  
Sbjct: 275 VSALIDVLSEAVRKRVQYLPARDALEVSLNQTK-ADIAILFSGGIDSMILAALTDRHVPA 333

Query: 140 SYEIDLLNVSFDGQFA-----------------------------------PDRISAKAG 164
              IDLLNV+F  Q A                                   PDRI+ +AG
Sbjct: 334 DKPIDLLNVAFKMQEAKMPPKSMKKGKNKKNDCDDADKTQLDQQKFNPFNVPDRITGRAG 393

Query: 165 LKELRGIAPLRRWKLVEIDSDLSNLTS-ETKHVMSLINPANTYMDLNIGIALWLAAGGDG 223
           L+EL+ ++P R+W  +EI+     L     K +  L++P +T +D ++G A+W AA G G
Sbjct: 394 LQELKNLSPKRQWNFIEINVTQEELVEMRQKRICHLVHPLDTVLDDSLGCAIWFAARGIG 453

Query: 224 WVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKL 283
            + E V      D++   YIS+++++L G GADEQ AGY RHR +YKH    GL  E+ +
Sbjct: 454 VINEAV------DEEL--YISEAKVVLTGIGADEQLAGYSRHRVRYKHSGLEGLVRELAM 505

Query: 284 DMQRIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKIL 343
           ++ RI  RNLGRDDR   D+GKEARFP+LDEDV+  L  +P+ E A+L  P G G+K +L
Sbjct: 506 ELGRISSRNLGRDDRIIGDHGKEARFPYLDEDVVSFLNGLPVSEKADLSLPRGVGEKLLL 565

Query: 344 REVAKMLGLYEAATLPKRAIQFGSRIARESNRKNFGSNR 382
           R  A  LGL  +A LPKRA+QFGSRIA+  +     S++
Sbjct: 566 RLAAVELGLGLSALLPKRAMQFGSRIAKLEDNHEKASDK 604

Danio rerio (taxid: 7955)
>sp|Q8BFS9|ASND1_MOUSE Asparagine synthetase domain-containing protein 1 OS=Mus musculus GN=Asnsd1 PE=2 SV=1 Back     alignment and function description
>sp|Q4R5D4|ASND1_MACFA Asparagine synthetase domain-containing protein 1 OS=Macaca fascicularis GN=ASNSD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9NWL6|ASND1_HUMAN Asparagine synthetase domain-containing protein 1 OS=Homo sapiens GN=ASNSD1 PE=2 SV=2 Back     alignment and function description
>sp|Q0V8E4|ASND1_BOVIN Asparagine synthetase domain-containing protein 1 OS=Bos taurus GN=ASNSD1 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZJN0|ASND1_CHICK Asparagine synthetase domain-containing protein 1 OS=Gallus gallus GN=ASNSD1 PE=2 SV=1 Back     alignment and function description
>sp|O74397|ASND1_SCHPO Asparagine synthetase domain-containing protein C4F6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC4F6.11c PE=3 SV=1 Back     alignment and function description
>sp|Q5LJP9|ASND1_DROME Asparagine synthetase domain-containing protein CG17486 OS=Drosophila melanogaster GN=CG17486 PE=2 SV=2 Back     alignment and function description
>sp|Q04489|ASND1_YEAST Asparagine synthetase domain-containing protein YML096W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML096W PE=1 SV=1 Back     alignment and function description
>sp|Q58516|ASNH1_METJA Putative asparagine synthetase [glutamine-hydrolyzing] 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1116 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
297738097 645 unnamed protein product [Vitis vinifera] 0.965 0.598 0.744 1e-166
357475055 646 Asparagine synthetase domain-containing 0.982 0.608 0.7 1e-158
356577015 629 PREDICTED: asparagine synthetase domain- 0.94 0.597 0.691 1e-158
449434722 659 PREDICTED: asparagine synthetase domain- 0.987 0.599 0.684 1e-156
449478352 659 PREDICTED: asparagine synthetase domain- 0.987 0.599 0.681 1e-155
224112106 780 predicted protein [Populus trichocarpa] 0.922 0.473 0.706 1e-148
359472823 567 PREDICTED: LOW QUALITY PROTEIN: asparagi 0.797 0.562 0.798 1e-148
297814678 613 hypothetical protein ARALYDRAFT_484275 [ 0.912 0.595 0.690 1e-147
186499124 610 Asparagine synthase-like protein [Arabid 0.912 0.598 0.675 1e-143
255542008 589 asparagine synthetase, putative [Ricinus 0.85 0.577 0.650 1e-138
>gi|297738097|emb|CBI27298.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 292/392 (74%), Positives = 333/392 (84%), Gaps = 6/392 (1%)

Query: 4   SELDRCFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHCETHLGEHNIHSACSD- 62
           S+ D+C +GE++KHEWTN +L EL+KWER +VEP        H      + ++HS C + 
Sbjct: 252 SKADKCLLGEVKKHEWTNPILKELVKWERTYVEPKPAEL---HFMIPSKQPDVHSICLER 308

Query: 63  IISESGPIPASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSG 122
             S  GP+  SVP  +  Q VL ALR+S+M+R++   IF AV C  +QEE+ PVA+LFSG
Sbjct: 309 KPSGLGPMQTSVP--VPAQTVLIALRESMMRRTTQSAIFPAVTCDLQQEELVPVAILFSG 366

Query: 123 GLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEI 182
           GLDSMILAALL+ECL PSY IDLLNVSFDGQ APDRISAKAGLKEL+ I+PLRRWKLVE+
Sbjct: 367 GLDSMILAALLDECLQPSYGIDLLNVSFDGQSAPDRISAKAGLKELQRISPLRRWKLVEV 426

Query: 183 DSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSSNDVDQQRVKY 242
           D+DLS LT ETKHVMSLINPA TYMDLNIGIALWLAAGGDGWV+E +   ++ + QRVKY
Sbjct: 427 DADLSKLTQETKHVMSLINPAKTYMDLNIGIALWLAAGGDGWVHEEIGEIDNDNYQRVKY 486

Query: 243 ISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCAD 302
            SK+RI+LVGSGADEQCAGYGRH+TKY+ GSW+GL+EEMKLDMQRIWKRNLGRDDRC AD
Sbjct: 487 KSKARILLVGSGADEQCAGYGRHKTKYRSGSWLGLNEEMKLDMQRIWKRNLGRDDRCIAD 546

Query: 303 NGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRA 362
           NGKEARFPFLDEDVIRTLLDIPLWE+ANLDQPSGTGDKKILREVA+MLG+YEAATLPKRA
Sbjct: 547 NGKEARFPFLDEDVIRTLLDIPLWEVANLDQPSGTGDKKILREVAQMLGIYEAATLPKRA 606

Query: 363 IQFGSRIARESNRKNFGSNRAANQASAGSVVI 394
           IQFGSRIARESNRKNFGSNRAANQASAGSVVI
Sbjct: 607 IQFGSRIARESNRKNFGSNRAANQASAGSVVI 638

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357475055|ref|XP_003607813.1| Asparagine synthetase domain-containing protein [Medicago truncatula] gi|355508868|gb|AES90010.1| Asparagine synthetase domain-containing protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356577015|ref|XP_003556625.1| PREDICTED: asparagine synthetase domain-containing protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|449434722|ref|XP_004135145.1| PREDICTED: asparagine synthetase domain-containing protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449478352|ref|XP_004155293.1| PREDICTED: asparagine synthetase domain-containing protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224112106|ref|XP_002316084.1| predicted protein [Populus trichocarpa] gi|222865124|gb|EEF02255.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359472823|ref|XP_002273900.2| PREDICTED: LOW QUALITY PROTEIN: asparagine synthetase domain-containing protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297814678|ref|XP_002875222.1| hypothetical protein ARALYDRAFT_484275 [Arabidopsis lyrata subsp. lyrata] gi|297321060|gb|EFH51481.1| hypothetical protein ARALYDRAFT_484275 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|186499124|ref|NP_001077875.2| Asparagine synthase-like protein [Arabidopsis thaliana] gi|330250639|gb|AEC05733.1| Asparagine synthase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255542008|ref|XP_002512068.1| asparagine synthetase, putative [Ricinus communis] gi|223549248|gb|EEF50737.1| asparagine synthetase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
TAIR|locus:4010713612610 AT2G03667 [Arabidopsis thalian 0.785 0.514 0.754 6.7e-134
RGD|1306332627 Asnsd1 "asparagine synthetase 0.532 0.339 0.495 5.3e-61
MGI|MGI:1917646627 Asnsd1 "asparagine synthetase 0.532 0.339 0.491 1.1e-60
ZFIN|ZDB-GENE-030616-362612 asnsd1 "asparagine synthetase 0.585 0.382 0.448 3.3e-59
UNIPROTKB|F1RXV0642 LOC100737189 "Uncharacterized 0.552 0.344 0.478 9.9e-58
UNIPROTKB|E2REQ1639 ASNSD1 "Uncharacterized protei 0.587 0.367 0.461 3.3e-57
UNIPROTKB|C9IYZ1618 ASNSD1 "Asparagine synthetase 0.572 0.370 0.455 5.4e-57
UNIPROTKB|Q9NWL6643 ASNSD1 "Asparagine synthetase 0.572 0.356 0.455 5.4e-57
UNIPROTKB|E1BB20640 ASNSD1 "Asparagine synthetase 0.53 0.331 0.491 1.4e-56
UNIPROTKB|Q0V8E4640 ASNSD1 "Asparagine synthetase 0.53 0.331 0.486 4.8e-56
TAIR|locus:4010713612 AT2G03667 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1232 (438.7 bits), Expect = 6.7e-134, Sum P(2) = 6.7e-134
 Identities = 243/322 (75%), Positives = 276/322 (85%)

Query:    73 SVPCSMS-VQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAA 131
             SV  S+   Q VL  L++SV +R+SLH+I+Q        +E  PVAVLFSGGLDSMILAA
Sbjct:   288 SVSTSLGFAQTVLVVLKESVRRRTSLHSIYQG------DKEAVPVAVLFSGGLDSMILAA 341

Query:   132 LLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTS 191
             LL++CLDP YE+DLLNVSFDG  APDRISAKAG+KEL+ IAP RRWKLVEID+DLS L  
Sbjct:   342 LLHQCLDPKYEVDLLNVSFDGPNAPDRISAKAGIKELKKIAPFRRWKLVEIDADLSKLGF 401

Query:   192 ETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYE-GVTSSNDVDQQRVKYISKSRIIL 250
             ETK VMSLINPA+TYMDLNIG ALWLAA GDGW++E     S + + QRVKY S +RI+L
Sbjct:   402 ETKRVMSLINPADTYMDLNIGTALWLAARGDGWIHEDNGNPSVEENNQRVKYKSDARILL 461

Query:   251 VGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFP 310
             VG+GADEQCAGYGRHRTKY++GSWV LD+EMKLDMQRIWKRNLGRDDRC ADNGKE RFP
Sbjct:   462 VGAGADEQCAGYGRHRTKYRNGSWVALDQEMKLDMQRIWKRNLGRDDRCIADNGKEGRFP 521

Query:   311 FLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIA 370
             FLDEDVI+TLLDIPLWEIA+L+QPSGTGDKKILR+VA +LG++E A +PKRAIQFGSRIA
Sbjct:   522 FLDEDVIKTLLDIPLWEIADLEQPSGTGDKKILRQVASLLGVHEVAKMPKRAIQFGSRIA 581

Query:   371 RESNRKNFGSNRAANQASAGSV 392
             RESNRKNFGSNRAANQASAGSV
Sbjct:   582 RESNRKNFGSNRAANQASAGSV 603
GO:0004066 "asparagine synthase (glutamine-hydrolyzing) activity" evidence=IEA
GO:0005575 "cellular_component" evidence=ND
GO:0006529 "asparagine biosynthetic process" evidence=IEA
RGD|1306332 Asnsd1 "asparagine synthetase domain containing 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1917646 Asnsd1 "asparagine synthetase domain containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030616-362 asnsd1 "asparagine synthetase domain containing 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RXV0 LOC100737189 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2REQ1 ASNSD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|C9IYZ1 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NWL6 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BB20 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q0V8E4 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
cd01991269 cd01991, Asn_Synthase_B_C, The C-terminal domain o 2e-30
pfam00733195 pfam00733, Asn_synthase, Asparagine synthase 3e-26
COG0367542 COG0367, AsnB, Asparagine synthase (glutamine-hydr 3e-25
TIGR01536466 TIGR01536, asn_synth_AEB, asparagine synthase (glu 4e-17
PRK09431554 PRK09431, asnB, asparagine synthetase B; Provision 1e-05
PRK14561194 PRK14561, PRK14561, hypothetical protein; Provisio 5e-04
>gnl|CDD|238949 cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B Back     alignment and domain information 
 Score =  117 bits (294), Expect = 2e-30
 Identities = 72/304 (23%), Positives = 107/304 (35%), Gaps = 79/304 (25%)

Query: 102 QAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISA 161
            AV    R +   PV VL SGGLDS ++AAL    L    +   +   F+G  + +R  A
Sbjct: 6   DAVRRRLRSD--VPVGVLLSGGLDSSLVAALAARLLPEPVKTFSIGFGFEG--SDEREYA 61

Query: 162 KAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGG 221
           +   + L         +  E++   ++L +    V+      +     +  I L+L +  
Sbjct: 62  RRVAEHLG-------TEHHEVEFTPADLLAALPDVIW---ELDEPFADSSAIPLYLLS-- 109

Query: 222 DGWVYEGVTSSNDVDQQRVKYISK--SRIILVGSGADEQCAGYGRHRTKYKHGSWV---- 275
                              +   K   +++L G GADE   GY R+R             
Sbjct: 110 -------------------RLARKHGIKVVLSGEGADELFGGYPRYRRAPLARRRRRRLL 150

Query: 276 -------------GLDEEMKLDMQRIWKRN--------------------LGRDDRCCAD 302
                        GL EE+  D+ R+   N                    L RDDR    
Sbjct: 151 GLAALARALAGAEGLREELARDLARLHLLNGAADAAARARDLLTYLLGDLLLRDDRASMA 210

Query: 303 NGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRA 362
           +G E R PFLD  ++   L +P           G  +K +LRE A  L   E    PKR 
Sbjct: 211 HGLEVRVPFLDHRLVEFALSLPPELKIR-----GGREKYLLREAAAGLLPDEILWRPKRG 265

Query: 363 IQFG 366
            Q  
Sbjct: 266 FQVP 269

This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase . Length = 269
>gnl|CDD|216090 pfam00733, Asn_synthase, Asparagine synthase Back     alignment and domain information
>gnl|CDD|223444 COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233454 TIGR01536, asn_synth_AEB, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>gnl|CDD|236513 PRK09431, asnB, asparagine synthetase B; Provisional Back     alignment and domain information
>gnl|CDD|184745 PRK14561, PRK14561, hypothetical protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 400
TIGR03104589 trio_amidotrans asparagine synthase family amidotr 100.0
TIGR01536467 asn_synth_AEB asparagine synthase (glutamine-hydro 100.0
PRK09431554 asnB asparagine synthetase B; Provisional 100.0
PTZ00077586 asparagine synthetase-like protein; Provisional 100.0
TIGR03108628 eps_aminotran_1 exosortase 1 system-associated ami 100.0
PLN02549578 asparagine synthase (glutamine-hydrolyzing) 100.0
KOG0571543 consensus Asparagine synthase (glutamine-hydrolyzi 100.0
COG0367542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 100.0
KOG0573520 consensus Asparagine synthase [Amino acid transpor 100.0
cd01991269 Asn_Synthase_B_C The C-terminal domain of Asparagi 100.0
PF00733255 Asn_synthase: Asparagine synthase; InterPro: IPR00 100.0
cd01996154 Alpha_ANH_like_III This is a subfamily of Adenine 99.21
TIGR03573343 WbuX N-acetyl sugar amidotransferase. This enzyme 99.03
PRK00876326 nadE NAD synthetase; Reviewed 98.67
cd00712220 AsnB Glutamine amidotransferases class-II (GATase) 98.63
cd00553248 NAD_synthase NAD+ synthase is a homodimer, which c 98.56
TIGR00552250 nadE NAD+ synthetase. NAD+ synthetase is a nearly 98.55
TIGR00268252 conserved hypothetical protein TIGR00268. The N-te 98.53
cd01990202 Alpha_ANH_like_I This is a subfamily of Adenine nu 98.47
PRK13980265 NAD synthetase; Provisional 98.46
cd01909199 betaLS_CarA_N Glutamine amidotransferases class-II 98.32
COG1606269 ATP-utilizing enzymes of the PP-loop superfamily [ 98.3
PF06508209 QueC: Queuosine biosynthesis protein QueC; InterPr 98.29
COG0603222 Predicted PP-loop superfamily ATPase [General func 98.19
PRK14561194 hypothetical protein; Provisional 98.1
cd01993185 Alpha_ANH_like_II This is a subfamily of Adenine n 98.05
TIGR00364201 exsB protein. This protein family is represented b 97.95
PRK11106231 queuosine biosynthesis protein QueC; Provisional 97.92
PRK04527 400 argininosuccinate synthase; Provisional 97.89
cd01712177 ThiI ThiI is required for thiazole synthesis in th 97.78
PRK00143346 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed 97.75
cd01998349 tRNA_Me_trans tRNA methyl transferase. This family 97.65
PTZ00323294 NAD+ synthase; Provisional 97.63
PRK00509 399 argininosuccinate synthase; Provisional 97.62
PRK13981540 NAD synthetase; Provisional 97.61
TIGR00884311 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C 97.57
PRK14665360 mnmA tRNA-specific 2-thiouridylase MnmA; Provision 97.55
PRK08349198 hypothetical protein; Validated 97.53
cd01986103 Alpha_ANH_like Adenine nucleotide alpha hydrolases 97.49
PF02568197 ThiI: Thiamine biosynthesis protein (ThiI); InterP 97.48
PLN00200 404 argininosuccinate synthase; Provisional 97.46
PRK01565394 thiamine biosynthesis protein ThiI; Provisional 97.44
cd01995169 ExsB ExsB is a transcription regulator related pro 97.43
PF02540242 NAD_synthase: NAD synthase; InterPro: IPR022310 NA 97.4
TIGR00032 394 argG argininosuccinate synthase. argG in bacteria, 97.37
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 97.36
cd01999 385 Argininosuccinate_Synthase Argininosuccinate synth 97.36
PRK00919307 GMP synthase subunit B; Validated 97.3
PRK10696258 tRNA 2-thiocytidine biosynthesis protein TtcA; Pro 97.29
TIGR00342371 thiazole biosynthesis/tRNA modification protein Th 97.29
PRK13820 394 argininosuccinate synthase; Provisional 97.28
PRK08384381 thiamine biosynthesis protein ThiI; Provisional 97.24
PLN02347536 GMP synthetase 97.18
cd01994194 Alpha_ANH_like_IV This is a subfamily of Adenine n 97.18
PRK00768268 nadE NAD synthetase; Reviewed 97.15
cd01997295 GMP_synthase_C The C-terminal domain of GMP synthe 97.14
COG0037298 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle 97.09
COG0367542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 97.08
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 97.06
PRK14664362 tRNA-specific 2-thiouridylase MnmA; Provisional 96.99
TIGR00420352 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-me 96.97
PRK05370 447 argininosuccinate synthase; Validated 96.92
PF03054356 tRNA_Me_trans: tRNA methyl transferase; InterPro: 96.86
COG0482356 TrmU Predicted tRNA(5-methylaminomethyl-2-thiourid 96.83
PRK01269482 tRNA s(4)U8 sulfurtransferase; Provisional 96.81
cd01713173 PAPS_reductase This domain is found in phosphoaden 96.75
PRK00074511 guaA GMP synthase; Reviewed 96.74
PF00764 388 Arginosuc_synth: Arginosuccinate synthase; InterPr 96.71
COG2117198 Predicted subunit of tRNA(5-methylaminomethyl-2-th 96.7
PF01171182 ATP_bind_3: PP-loop family; InterPro: IPR011063 Th 96.52
PRK05253301 sulfate adenylyltransferase subunit 2; Provisional 96.43
COG1365255 Predicted ATPase (PP-loop superfamily) [General fu 96.42
PRK02628679 nadE NAD synthetase; Reviewed 96.33
TIGR03679218 arCOG00187 arCOG00187 universal archaeal metal-bin 96.33
COG0137 403 ArgG Argininosuccinate synthase [Amino acid transp 96.32
PRK10660 436 tilS tRNA(Ile)-lysidine synthetase; Provisional 95.99
PLN02339700 NAD+ synthase (glutamine-hydrolysing) 95.69
PRK08576438 hypothetical protein; Provisional 95.16
COG0171268 NadE NAD synthase [Coenzyme metabolism] 94.89
COG0519315 GuaA GMP synthase, PP-ATPase domain/subunit [Nucle 94.82
COG0301383 ThiI Thiamine biosynthesis ATP pyrophosphatase [Co 94.32
PRK13795 636 hypothetical protein; Provisional 94.27
KOG2805377 consensus tRNA (5-methylaminomethyl-2-thiouridylat 94.16
PRK08557417 hypothetical protein; Provisional 93.7
TIGR02039294 CysD sulfate adenylyltransferase, small subunit. I 93.61
PRK13794479 hypothetical protein; Provisional 93.44
KOG1706 412 consensus Argininosuccinate synthase [Amino acid t 93.32
PRK02090241 phosphoadenosine phosphosulfate reductase; Provisi 93.18
cd00715252 GPATase_N Glutamine amidotransferases class-II (GN 90.63
PF01507174 PAPS_reduct: Phosphoadenosine phosphosulfate reduc 90.63
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 89.06
PRK12563312 sulfate adenylyltransferase subunit 2; Provisional 88.59
TIGR00434212 cysH phosophoadenylyl-sulfate reductase (thioredox 86.99
COG3969407 Predicted phosphoadenosine phosphosulfate sulfotra 85.55
TIGR00289222 conserved hypothetical protein TIGR00289. Homologo 84.11
PRK06388474 amidophosphoribosyltransferase; Provisional 83.95
PRK05793469 amidophosphoribosyltransferase; Provisional 83.54
PRK09246501 amidophosphoribosyltransferase; Provisional 83.36
KOG1622552 consensus GMP synthase [Nucleotide transport and m 83.18
PRK07631475 amidophosphoribosyltransferase; Provisional 83.08
PRK07349500 amidophosphoribosyltransferase; Provisional 82.19
PRK00331604 glucosamine--fructose-6-phosphate aminotransferase 81.64
PRK07847510 amidophosphoribosyltransferase; Provisional 81.62
PRK08341442 amidophosphoribosyltransferase; Provisional 81.54
TIGR01135607 glmS glucosamine--fructose-6-phosphate aminotransf 81.26
TIGR03183 447 DNA_S_dndC putative sulfurtransferase DndC. Member 81.16
TIGR02057226 PAPS_reductase phosphoadenosine phosphosulfate red 80.96
PRK06781471 amidophosphoribosyltransferase; Provisional 80.89
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information 
Probab=100.00  E-value=3e-56  Score=473.24  Aligned_cols=306  Identities=20%  Similarity=0.195  Sum_probs=241.1

Q ss_pred             hhhcccCCEEEEeccchhHHcccCCCCCCCHhHHHHHhh---------hhhcCceeeCCCcEEEEcCCCC-c---C----
Q 015804            9 CFVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHC---------ETHLGEHNIHSACSDIISESGP-I---P----   71 (400)
Q Consensus         9 ~~~~~~~~~~~FaSeikaLl~~~~~~~~~d~~~l~~~l~---------T~~~gI~~l~pG~~l~i~~~~~-~---~----   71 (400)
                      ++....++.++||||+|+|++.+++++++|+.++.+||.         |+|+||++|||||+++++.++. .   |    
T Consensus       147 Lyy~~~~~~~~faSe~kaLl~~~~~~~~~d~~~l~~~l~~~~~~~~~~T~~~gI~~l~pG~~l~i~~~~~~~~~~yw~~~  226 (589)
T TIGR03104       147 LYYAEDAGRLRFASSLPALLAAGGVDTDIDPVALHHYLTFHAVVPAPHTILKGVRKLPPATWMTVEPDGSRTQRSYWSLD  226 (589)
T ss_pred             eEEEEeCCEEEEEeCHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCCCchhhCceeeCCCcEEEEECCCCeEEEeeccCC
Confidence            345567889999999999999999999999999999984         9999999999999999985441 1   1    


Q ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHhcccchhhhhhhcccccCCCceEEEecCCcchHHHHHHHHhhcCCCCcee
Q 015804           72 -------ASVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEID  144 (400)
Q Consensus        72 -------~~~~~~e~~~~l~~~L~~AV~~rl~~~~~~~~~~~~~~~~sd~pvgv~LSGGLDSs~Iaala~~~~~~~~~i~  144 (400)
                             ...+.++++++++++|.+||++|+               ++|+|||++||||||||+|++++++...  .+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~l~~~L~~AV~~rl---------------~sd~pvg~~LSGGlDSs~Iaa~~~~~~~--~~l~  289 (589)
T TIGR03104       227 AGRPADDAARTEADWQDAILEALRLAVKRRL---------------VADVPVGVLLSGGLDSSLIVGLLAEAGV--DGLR  289 (589)
T ss_pred             CCcccccCCCCHHHHHHHHHHHHHHHHHHHh---------------hcCCceeEEecCCccHHHHHHHHHHhcC--CCce
Confidence                   123567889999999999999999               6999999999999999999999987653  4699


Q ss_pred             EEEeecCCC---CCccHHHHHHHHHHHhhcCCcccceEEEecCCcchhccchHHHHhhcccCCCcccchhHHHHHHHhcC
Q 015804          145 LLNVSFDGQ---FAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGG  221 (400)
Q Consensus       145 ~ftvgf~~~---~~~d~~~A~~~a~~l~~~~~~~~~~l~~i~~~~~~~~~~~~~i~~~i~~~~~~~d~~~~~~~~~~~~~  221 (400)
                      |||++|++.   .++|..+|+++|++++..|     +.+.+  +.+++.   +.+.++++..+.++..+..+++|++++ 
T Consensus       290 tftigf~~~~~~~~dE~~~A~~vA~~~g~~h-----~~i~~--~~~~~~---~~l~~~v~~~~~P~~~~~~~~~~~l~~-  358 (589)
T TIGR03104       290 TFSIGFEDVGGEKGDEFEYSDIIAERFHTRH-----HKIRI--PNHRVL---PALPEAVAAMSEPMVSHDCVAFYLLSE-  358 (589)
T ss_pred             EEEEEecCCCCCCCChHHHHHHHHHHhCCcC-----eEEEc--CHHHHH---HHHHHHHHHhCCCCCCchHHHHHHHHH-
Confidence            999999764   3578999999999998543     33443  344554   344444544443433344678888875 


Q ss_pred             CCcccccccCCCchhhHHHHhhcCceEEEecccccccCCCCccchhhhcC-------------------------C----
Q 015804          222 DGWVYEGVTSSNDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKH-------------------------G----  272 (400)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~a~~~g~kVvLsG~GaDElF~GY~~~~~~~~~-------------------------~----  272 (400)
                                        . +++++||+|||+|||||||||++|...+..                         .    
T Consensus       359 ------------------~-a~~~~kV~LsGeGaDElFgGY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (589)
T TIGR03104       359 ------------------E-VSKHVKVVQSGQGADEVFGGYHWYPPLAAGAGDPVAAYRRAFFDRDHAEYLEMVGPRFHA  419 (589)
T ss_pred             ------------------H-HhCCCeEEeecCchHhcccCcHhHHHHHhhccCchHHHHHHHhccCHHHHHHHhhhhhhc
Confidence                              3 466899999999999999999877532100                         0    


Q ss_pred             -Cc---------------chhHHHHHHHHHHHHh-hccCccchhhhcCCCcccCCCCCHHHHHHHhcCChhhhhccCCCC
Q 015804          273 -SW---------------VGLDEEMKLDMQRIWK-RNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPS  335 (400)
Q Consensus       273 -~~---------------~~l~~~l~~dl~~~~~-~~L~r~Dr~sma~gvE~R~PFLD~~vve~a~~lP~~~k~k~~~~~  335 (400)
                       .+               +.+++.++.|++.++. .+|.+.||++|++|||+|+||||++|||||++||+++|+  +   
T Consensus       420 ~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~l~~~~L~~~Dr~sMa~svE~R~PFLD~~lve~a~~lP~~~k~--~---  494 (589)
T TIGR03104       420 EDVSGEFVADHFARPGADTAVDQALRLDTTVMLVDDPVKRVDNMTMAWGLEARVPFLDHELVELAARIPPELKL--A---  494 (589)
T ss_pred             cchhHHHHHHHhhcccCCCHHHHHHHHHHHHhCccccccchhhhhhhccccccCCccCHHHHHHHHhCCHHHhc--C---
Confidence             00               1233444556665555 457899999999999999999999999999999999964  4   


Q ss_pred             CCCchHHHHHHHHhcCchhhhcCCCCcccCCc
Q 015804          336 GTGDKKILREVAKMLGLYEAATLPKRAIQFGS  367 (400)
Q Consensus       336 g~~~K~iLR~a~~~~lP~~i~~R~K~g~q~gs  367 (400)
                      | .+|||||++++++||++|++|||+||..+-
T Consensus       495 ~-~~K~iLR~a~~~~lP~~i~~R~K~gf~~P~  525 (589)
T TIGR03104       495 D-GGKGVLKEAARGVIPSEVIDRPKGYFPVPA  525 (589)
T ss_pred             C-CcCHHHHHHHhhhCCHHHhCCCCCCCCCcH
Confidence            3 379999999999999999999999876553

Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>KOG0571 consensus Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO) Back     alignment and domain information
>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>TIGR03573 WbuX N-acetyl sugar amidotransferase Back     alignment and domain information
>PRK00876 nadE NAD synthetase; Reviewed Back     alignment and domain information
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>TIGR00552 nadE NAD+ synthetase Back     alignment and domain information
>TIGR00268 conserved hypothetical protein TIGR00268 Back     alignment and domain information
>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PRK13980 NAD synthetase; Provisional Back     alignment and domain information
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type Back     alignment and domain information
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only] Back     alignment and domain information
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome Back     alignment and domain information
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only] Back     alignment and domain information
>PRK14561 hypothetical protein; Provisional Back     alignment and domain information
>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>TIGR00364 exsB protein Back     alignment and domain information
>PRK11106 queuosine biosynthesis protein QueC; Provisional Back     alignment and domain information
>PRK04527 argininosuccinate synthase; Provisional Back     alignment and domain information
>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway Back     alignment and domain information
>PRK00143 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed Back     alignment and domain information
>cd01998 tRNA_Me_trans tRNA methyl transferase Back     alignment and domain information
>PTZ00323 NAD+ synthase; Provisional Back     alignment and domain information
>PRK00509 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK13981 NAD synthetase; Provisional Back     alignment and domain information
>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit Back     alignment and domain information
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>PRK08349 hypothetical protein; Validated Back     alignment and domain information
>cd01986 Alpha_ANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information
>PF02568 ThiI: Thiamine biosynthesis protein (ThiI); InterPro: IPR020536 Thiamine pyrophosphate (TPP) is synthesized de novo in many bacteria and is a required cofactor for many enzymes in the cell Back     alignment and domain information
>PLN00200 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK01565 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>cd01995 ExsB ExsB is a transcription regulator related protein Back     alignment and domain information
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6 Back     alignment and domain information
>TIGR00032 argG argininosuccinate synthase Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>cd01999 Argininosuccinate_Synthase Argininosuccinate synthase Back     alignment and domain information
>PRK00919 GMP synthase subunit B; Validated Back     alignment and domain information
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional Back     alignment and domain information
>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI Back     alignment and domain information
>PRK13820 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK08384 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PRK00768 nadE NAD synthetase; Reviewed Back     alignment and domain information
>cd01997 GMP_synthase_C The C-terminal domain of GMP synthetase Back     alignment and domain information
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Back     alignment and domain information
>PRK05370 argininosuccinate synthase; Validated Back     alignment and domain information
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 Back     alignment and domain information
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional Back     alignment and domain information
>cd01713 PAPS_reductase This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6 Back     alignment and domain information
>COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only] Back     alignment and domain information
>PRK02628 nadE NAD synthetase; Reviewed Back     alignment and domain information
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein Back     alignment and domain information
>COG0137 ArgG Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional Back     alignment and domain information
>PLN02339 NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information
>PRK08576 hypothetical protein; Provisional Back     alignment and domain information
>COG0171 NadE NAD synthase [Coenzyme metabolism] Back     alignment and domain information
>COG0519 GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism] Back     alignment and domain information
>PRK13795 hypothetical protein; Provisional Back     alignment and domain information
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK08557 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02039 CysD sulfate adenylyltransferase, small subunit Back     alignment and domain information
>PRK13794 hypothetical protein; Provisional Back     alignment and domain information
>KOG1706 consensus Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional Back     alignment and domain information
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type Back     alignment and domain information
>PF01507 PAPS_reduct: Phosphoadenosine phosphosulfate reductase family; InterPro: IPR002500 This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>TIGR00434 cysH phosophoadenylyl-sulfate reductase (thioredoxin) Back     alignment and domain information
>COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only] Back     alignment and domain information
>TIGR00289 conserved hypothetical protein TIGR00289 Back     alignment and domain information
>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed Back     alignment and domain information
>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing) Back     alignment and domain information
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC Back     alignment and domain information
>TIGR02057 PAPS_reductase phosphoadenosine phosphosulfate reductase, thioredoxin dependent Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 4e-15
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 9e-15
1ct9_A553 Asparagine synthetase B; amidotransferase, substra 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 5e-04
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Length = 503 Back     alignment and structure
 Score = 75.9 bits (187), Expect = 4e-15
 Identities = 35/263 (13%), Positives = 72/263 (27%), Gaps = 48/263 (18%)

Query: 108 RRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAGLKE 167
                   V +  SGGLDS ++ AL +        ++  ++  +   + +   ++     
Sbjct: 233 DLAPRFDTVGIPLSGGLDSSLVTALASRHFKK---LNTYSIGTEL--SNEFEFSQQ---- 283

Query: 168 LRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYE 227
              +A              + + +     +      +  +   I   L+           
Sbjct: 284 ---VADALGTHHQMKILSETEVINGIIESIYYNEIFDG-LSAEIQSGLFNVY-------- 331

Query: 228 GVTSSNDVDQQRVKYISKS-RIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQ 286
                        +        +L G G+D    G  +   +Y + +       +  +  
Sbjct: 332 -------------RQAQGQVSCMLTGYGSDLLFGGILKPGAQYDNPNQ------LLAEQV 372

Query: 287 RIWKRNLGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREV 346
              +          +  G + R PF    +I     +      +         K ILRE 
Sbjct: 373 YRTRWTGEFATHGASCYGIDIRHPFWSHSLISLCHALH----PDYKIFDNEV-KNILREY 427

Query: 347 AKMLGLYEAATL--PKRAIQFGS 367
           A  L L     +   K  I  GS
Sbjct: 428 ADSLQLLPKDIVWRKKIGIHEGS 450
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Length = 513 Back     alignment and structure
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Length = 553 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Length = 203 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 100.0
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 100.0
1ct9_A553 Asparagine synthetase B; amidotransferase, substra 100.0
1xng_A268 NH(3)-dependent NAD(+) synthetase; amidotransferas 98.78
1kqp_A271 NAD+ synthase, NH(3)-dependent NAD(+) synthetase, 98.77
3bl5_A219 Queuosine biosynthesis protein QUEC; PREQ1 biosynt 98.65
3n05_A590 NH(3)-dependent NAD(+) synthetase; ligase, structu 98.49
3fiu_A249 NH(3)-dependent NAD(+) synthetase; rossman fold, a 98.42
2e18_A257 NH(3)-dependent NAD(+) synthetase; ligase, structu 98.39
3p52_A249 NH(3)-dependent NAD(+) synthetase; structural geno 98.33
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 98.22
2pg3_A232 Queuosine biosynthesis protein QUEC; YP_049261.1, 98.14
2dpl_A308 GMP synthetase, GMP synthase [glutamine-hydrolyzin 97.96
1wxi_A275 NH(3)-dependent NAD(+) synthetase; NADE, E.coli, l 97.86
1kor_A 400 Argininosuccinate synthetase; ligase, riken struct 97.71
2nz2_A 413 Argininosuccinate synthase; amino-acid biosynthesi 97.66
1vl2_A 421 Argininosuccinate synthase; TM1780, structural gen 97.65
1wy5_A317 TILS, hypothetical UPF0072 protein AQ_1887; N-type 97.64
2hma_A376 Probable tRNA (5-methylaminomethyl-2-thiouridylat 97.5
1k92_A 455 Argininosuccinate synthase, argininosuccinate SY; 97.44
2der_A380 TRNA-specific 2-thiouridylase MNMA; protein-RNA co 97.36
3sdb_A680 Glutamine-dependent NAD(+) synthetase; glutamine-a 97.35
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 97.34
3tqi_A527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 97.27
3q4g_A279 NH(3)-dependent NAD(+) synthetase; structural geno 97.24
1gpm_A525 GMP synthetase, XMP aminase; class I glutamine ami 97.22
4f4h_A565 Glutamine dependent NAD+ synthetase; structural ge 96.91
2ywb_A503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 96.91
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 96.74
3dpi_A285 NAD+ synthetase; ssgcid, decode, structural genomi 96.73
2c5s_A413 THII, probable thiamine biosynthesis protein THII; 96.62
3a2k_A 464 TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, 96.6
1sur_A215 PAPS reductase; assimilatory sulfate reduction, 3- 96.45
3uow_A556 GMP synthetase; structural genomics consortium, SG 96.3
1ni5_A 433 Putative cell cycle protein MESJ; structural genom 95.89
3rjz_A237 N-type ATP pyrophosphatase superfamily; structural 95.84
2o8v_A252 Phosphoadenosine phosphosulfate reductase; disulfi 95.79
1zun_A325 Sulfate adenylyltransferase subunit 2; beta barrel 95.1
2wsi_A306 FAD synthetase; transferase, nucleotidyltransferas 94.67
2oq2_A261 Phosphoadenosine phosphosulfate reductase; sulfate 94.24
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 94.01
1vbk_A307 Hypothetical protein PH1313; structural genomics, 91.78
2goy_A275 Adenosine phosphosulfate reductase; iron sulfur cl 91.35
1xff_A240 D-fructose-6-, glucosamine--fructose-6-phosphate a 91.23
3fwk_A308 FMN adenylyltransferase; FAD biosynthesis, alpha/b 86.65
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 85.15
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-49  Score=415.40  Aligned_cols=294  Identities=19%  Similarity=0.144  Sum_probs=218.6

Q ss_pred             hhcccCCEEEEeccchhHHcccCCCCCCCHhHHHHHhh-hhhcCceeeCCCcEEEEc--CCCCc---C-------CCCCh
Q 015804           10 FVGELRKHEWTNAMLMELIKWERIFVEPTTENCGFSHC-ETHLGEHNIHSACSDIIS--ESGPI---P-------ASVPC   76 (400)
Q Consensus        10 ~~~~~~~~~~FaSeikaLl~~~~~~~~~d~~~l~~~l~-T~~~gI~~l~pG~~l~i~--~~~~~---~-------~~~~~   76 (400)
                      +.+...+.++||||+|+|++++. +...+..   .+.. |+|++|++|||||+++++  .++..   +       ...+.
T Consensus       144 yy~~~~~~~~faSe~~aL~~~~~-~~~~~l~---~~~~~t~~~~i~~l~pG~~l~i~~~~g~~~~~~yw~~~~~~~~~~~  219 (513)
T 1jgt_A          144 YTCVAPGEVRASTEAKALAAHRD-PKGFPLA---DARRVAGLTGVYQVPAGAVMDIDLGSGTAVTHRTWTPGLSRRILPE  219 (513)
T ss_dssp             EEEEETTEEEEESCHHHHHTC---CCCCCCT---TSEECSSCSSCEECCTTEEEEEETTTTEEEEEECCCCCCSCBCCCH
T ss_pred             EEEEeCCEEEEcchHHHHHhccC-ccccccc---CCCccccccceEEcCCCcEEEEEcCCCCEEEEeecCCcccccCCCH
Confidence            45566789999999999999864 3444432   2222 999999999999999998  44321   1       12467


Q ss_pred             hHHHHHHHHHHHHHHHHHhcccchhhhhhhcccccCCCceEEEecCCcchHHHHHHHHhhcCCCCceeEEEeecCCCCCc
Q 015804           77 SMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAP  156 (400)
Q Consensus        77 ~e~~~~l~~~L~~AV~~rl~~~~~~~~~~~~~~~~sd~pvgv~LSGGLDSs~Iaala~~~~~~~~~i~~ftvgf~~~~~~  156 (400)
                      ++++++++++|.+||++|+               ++|+|||++||||+|||+|++++++..   .++++||++|++  .+
T Consensus       220 ~~~~~~l~~~L~~aV~~rl---------------~sd~~vgv~LSGGlDSS~vaala~~~~---~~v~tfti~~~~--~~  279 (513)
T 1jgt_A          220 GEAVAAVRAALEKAVAQRV---------------TPGDTPLVVLSGGIDSSGVAACAHRAA---GELDTVSMGTDT--SN  279 (513)
T ss_dssp             HHHHHHHHHHHHHHHHHHS---------------CTTCCCEEECCSSHHHHHHHHHHHHHH---SSCEEEEEECSS--CC
T ss_pred             HHHHHHHHHHHHHHHHHHH---------------hCCCcEEEECCCcHHHHHHHHHHHHhC---CCceEEEcCCCC--CC
Confidence            8999999999999999999               699999999999999999999998875   369999999975  57


Q ss_pred             cHHHHHHHHHHHhhcCCcccceEEEecCCcchhccchHHHHhhcccCCC--cccchhHHHHHHHhcCCCcccccccCCCc
Q 015804          157 DRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANT--YMDLNIGIALWLAAGGDGWVYEGVTSSND  234 (400)
Q Consensus       157 d~~~A~~~a~~l~~~~~~~~~~l~~i~~~~~~~~~~~~~i~~~i~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (400)
                      |..+|+.+|++++.     +|+  .+..+.+++....+++   ++..++  ++..+..+++|++++              
T Consensus       280 E~~~A~~vA~~lg~-----~h~--~i~i~~~~~~~~l~~~---~~~~~~~~p~~~~~~~~~~~l~~--------------  335 (513)
T 1jgt_A          280 EFREARAVVDHLRT-----RHR--EITIPTTELLAQLPYA---VWASESVDPDIIEYLLPLTALYR--------------  335 (513)
T ss_dssp             CHHHHHHHHHHHTC-----EEE--EEECCHHHHHTTHHHH---HHHHCCCCHHHHHHHHHHHHHHH--------------
T ss_pred             HHHHHHHHHHHhCC-----CcE--EEECCHHHHHHHHHHH---HHHhCCCCcccchhHHHHHHHHH--------------
Confidence            99999999999974     233  3344444554333333   333322  222334567777764              


Q ss_pred             hhhHHHHhhcCceEEEecccccccCCCCccchhhhcCCCcchhHHHHHHHHHHHHhhccCccchhhh----cCCCcccCC
Q 015804          235 VDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCA----DNGKEARFP  310 (400)
Q Consensus       235 ~~~~~~a~~~g~kVvLsG~GaDElF~GY~~~~~~~~~~~~~~l~~~l~~dl~~~~~~~L~r~Dr~sm----a~gvE~R~P  310 (400)
                           . ++.|++|+|||+||||+|+||.+|.      .|..+.++.   +..++..++.  ||++|    ++|+|+|+|
T Consensus       336 -----~-a~~g~~VvltG~GaDElfgGY~~~~------~~~~l~~e~---l~~l~~~~ll--Dr~sm~la~a~glE~R~P  398 (513)
T 1jgt_A          336 -----A-LDGPERRILTGYGADIPLGGMHRED------RLPALDTVL---AHDMATFDGL--NEMSPVLSTLAGHWTTHP  398 (513)
T ss_dssp             -----H-CCSSCCEEECCTTTHHHHTTTCCCS------CCHHHHHHH---HHHHHHCTTC--CTTCTHHHHTTTCEEECG
T ss_pred             -----H-HHcCCCEEEeCCChhhcccCccccC------ChhhcCHHH---HHHHhhccch--hhhhhhhhhhcCcceECC
Confidence                 3 3789999999999999999999872      354555442   3333344444  99999    999999999


Q ss_pred             CCCHHHHHHHhcCChhhhhccCCCCCCCchHHHHHHHHhcCchhhhcCCCCcccCCchhhHhh
Q 015804          311 FLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIARES  373 (400)
Q Consensus       311 FLD~~vve~a~~lP~~~k~k~~~~~g~~~K~iLR~a~~~~lP~~i~~R~K~g~q~gs~~~~~~  373 (400)
                      |||++|||||++||.++|+  +   +..+|||||++|++++|++|++|+|+||++|++..+++
T Consensus       399 fLD~~lve~a~~lP~~~k~--~---~~~~K~iLR~a~~~~lP~~i~~R~K~gf~~p~~~~~~l  456 (513)
T 1jgt_A          399 YWDREVLDLLVSLEAGLKR--R---HGRDKWVLRAAMADALPAETVNRPKLGVHEGSGTTSSF  456 (513)
T ss_dssp             GGSHHHHHHHHHBCHHHHE--E---TTEETHHHHHHHTTTSCHHHHHSCCC---------CHH
T ss_pred             CCCHHHHHHHHcCCHHHhc--C---CCCCHHHHHHHHHhhCCHHHHhCCcCCCCCChhHHHHH
Confidence            9999999999999999975  3   23689999999999999999999999999999966554
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A Back     alignment and structure
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A Back     alignment and structure
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} Back     alignment and structure
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis} Back     alignment and structure
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} Back     alignment and structure
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii} Back     alignment and structure
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0 Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1 Back     alignment and structure
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A Back     alignment and structure
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A* Back     alignment and structure
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A* Back     alignment and structure
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens} Back     alignment and structure
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1 Back     alignment and structure
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A* Back     alignment and structure
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae} Back     alignment and structure
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A* Back     alignment and structure
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A* Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0 Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis} Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0 Back     alignment and structure
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Back     alignment and structure
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2 Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1 Back     alignment and structure
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A Back     alignment and structure
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} Back     alignment and structure
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2 Back     alignment and structure
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa} Back     alignment and structure
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A* Back     alignment and structure
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A* Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 400
d1ct9a1324 c.26.2.1 (A:193-516) Asparagine synthetase B, C-te 4e-09
d1q15a1296 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pecto 6e-09
d1jgta1299 c.26.2.1 (A:210-508) beta-Lactam synthetase {Strep 6e-05
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 324 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 55.4 bits (132), Expect = 4e-09
 Identities = 47/256 (18%), Positives = 77/256 (30%), Gaps = 28/256 (10%)

Query: 115 PVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDGQFAPDRISAKAG--LKELRGIA 172
           P  VL SGGLDS I++A+  +      E    + ++  Q     +       LK  + +A
Sbjct: 36  PYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVA 95

Query: 173 PLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSS 232
                   EI   +       + V+  I   +                            
Sbjct: 96  NHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYL---------------- 139

Query: 233 NDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRN 292
                 R       +++L G G+DE   GY                EE    +  +   +
Sbjct: 140 ----MSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKEL---HEETVRKLLALHMYD 192

Query: 293 LGRDDRCCADNGKEARFPFLDEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGL 352
             R ++  +  G EAR PFLD+  +   + I   +    +         ILRE  +    
Sbjct: 193 CARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKH---ILRECFEAYLP 249

Query: 353 YEAATLPKRAIQFGSR 368
              A   K     G  
Sbjct: 250 ASVAWRQKEQFSDGVG 265
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 296 Back     information, alignment and structure
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Length = 299 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
d1jgta1299 beta-Lactam synthetase {Streptomyces clavuligerus 100.0
d1ct9a1324 Asparagine synthetase B, C-terminal domain {Escher 100.0
d1q15a1296 beta-Lactam synthetase {Pectobacterium carotovorum 100.0
d1xnga1255 NH3-dependent NAD+-synthetase {Helicobacter pylori 97.72
d1jgta2206 beta-Lactam synthetase {Streptomyces clavuligerus 97.6
d2c5sa1218 Thiamine biosynthesis protein ThiI, C-terminal dom 97.52
d1gpma1197 GMP synthetase, central domain {Escherichia coli [ 97.49
d1wxia1274 NH3-dependent NAD+-synthetase {Escherichia coli [T 97.41
d1k92a1188 Argininosuccinate synthetase, N-terminal domain {E 97.29
d1kqpa_271 NH3-dependent NAD+-synthetase {Bacillus subtilis [ 97.22
d1vl2a1168 Argininosuccinate synthetase, N-terminal domain {T 97.16
d1j20a1165 Argininosuccinate synthetase, N-terminal domain {T 96.99
d1wy5a1216 TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId 96.83
d2pg3a1230 Queuosine biosynthesis protein QueC {Erwinia carot 96.81
d1q15a2204 beta-Lactam synthetase {Pectobacterium carotovorum 96.3
d1ni5a1227 tRNA-Ile-lysidine synthetase, TilS, N-terminal dom 95.92
d1zuna1211 Sulfate adenylyltransferase subunit 2, CysD {Pseud 95.4
d1gph12234 Glutamine PRPP amidotransferase, N-terminal domain 92.08
d1sura_215 Phosphoadenylyl sulphate (PAPS) reductase {Escheri 91.23
d1vbka1132 Hypothetical protein PH1313, C-terminal domain {Ar 85.92
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: beta-Lactam synthetase
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=100.00  E-value=5.6e-47  Score=368.12  Aligned_cols=240  Identities=23%  Similarity=0.208  Sum_probs=181.2

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHhcccchhhhhhhcccccCCCceEEEecCCcchHHHHHHHHhhcCCCCceeEEEeecCC
Q 015804           73 SVPCSMSVQRVLNALRKSVMQRSSLHTIFQAVICGRRQEEIAPVAVLFSGGLDSMILAALLNECLDPSYEIDLLNVSFDG  152 (400)
Q Consensus        73 ~~~~~e~~~~l~~~L~~AV~~rl~~~~~~~~~~~~~~~~sd~pvgv~LSGGLDSs~Iaala~~~~~~~~~i~~ftvgf~~  152 (400)
                      ..++.|+++.++++|.+||++|+               .+++|+|++||||||||+|++++++..   .+++|||++|++
T Consensus         7 ~~~~~ea~~~~r~~L~~AV~~rl---------------~~~~~~gv~LSGGlDSs~iaa~~~~~~---~~~~~~s~~~~~   68 (299)
T d1jgta1           7 ILPEGEAVAAVRAALEKAVAQRV---------------TPGDTPLVVLSGGIDSSGVAACAHRAA---GELDTVSMGTDT   68 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHS---------------CTTCCCEEECCSSHHHHHHHHHHHHHH---SSCEEEEEECSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---------------cCCCCEEEEccCHHHHHHHHHHHHHhC---CCcceeecCccc
Confidence            45788999999999999999999               689999999999999999999998875   379999999976


Q ss_pred             CCCccHHHHHHHHHHHhhcCCcccceEEEecCCcchhccchHHHHhhcccCCCcccchhHHHHHHHhcCCCcccccccCC
Q 015804          153 QFAPDRISAKAGLKELRGIAPLRRWKLVEIDSDLSNLTSETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYEGVTSS  232 (400)
Q Consensus       153 ~~~~d~~~A~~~a~~l~~~~~~~~~~l~~i~~~~~~~~~~~~~i~~~i~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  232 (400)
                        ++|..+|+.+|++++.     +|+.+  ..+.+++...++++...++..+ ++..+..+++|++++            
T Consensus        69 --~~e~~~A~~va~~lg~-----~h~~~--~i~~~d~~~~l~~~i~~~e~~~-~~~~~~~~~~~~l~~------------  126 (299)
T d1jgta1          69 --SNEFREARAVVDHLRT-----RHREI--TIPTTELLAQLPYAVWASESVD-PDIIEYLLPLTALYR------------  126 (299)
T ss_dssp             --CCCHHHHHHHHHHHTC-----EEEEE--ECCHHHHHTTHHHHHHHHCCCC-HHHHHHHHHHHHHHH------------
T ss_pred             --hHHHHHHHHhhhcccc-----ccccc--ceehhhhhccchhhhhccccch-hccccccchHHHHHh------------
Confidence              5799999999999974     23333  3445566544444433322111 122233566666653            


Q ss_pred             CchhhHHHHhhcCceEEEecccccccCCCCccchhhhcCCCcchhHHHHHHHHHHHHhhccCccchhhhcCCCcccCCCC
Q 015804          233 NDVDQQRVKYISKSRIILVGSGADEQCAGYGRHRTKYKHGSWVGLDEEMKLDMQRIWKRNLGRDDRCCADNGKEARFPFL  312 (400)
Q Consensus       233 ~~~~~~~~a~~~g~kVvLsG~GaDElF~GY~~~~~~~~~~~~~~l~~~l~~dl~~~~~~~L~r~Dr~sma~gvE~R~PFL  312 (400)
                              +++.|+||+|||+||||+||||.+|..      +..+++.+..|+..+ .....+.|+++|++|+|+|+|||
T Consensus       127 --------~~~~~~kVvLsG~GaDElfgGY~~~~~------~~~~~~~l~~d~~~~-~~l~~~~d~~s~~~gvE~R~PFL  191 (299)
T d1jgta1         127 --------ALDGPERRILTGYGADIPLGGMHREDR------LPALDTVLAHDMATF-DGLNEMSPVLSTLAGHWTTHPYW  191 (299)
T ss_dssp             --------HCCSSCCEEECCTTTHHHHTTTCCCSC------CHHHHHHHHHHHHHC-TTCCTTCTHHHHTTTCEEECGGG
T ss_pred             --------hhhhccceeeeccChHHHhCcchHHhh------hhhhhhhhHHHhhhh-hhhhhHHHHHHHhcCceeecchh
Confidence                    357899999999999999999998863      334556666665432 23346789999999999999999


Q ss_pred             CHHHHHHHhcCChhhhhccCCCCCCCchHHHHHHHHhcCchhhhcCCCCcccCCchhhHh
Q 015804          313 DEDVIRTLLDIPLWEIANLDQPSGTGDKKILREVAKMLGLYEAATLPKRAIQFGSRIARE  372 (400)
Q Consensus       313 D~~vve~a~~lP~~~k~k~~~~~g~~~K~iLR~a~~~~lP~~i~~R~K~g~q~gs~~~~~  372 (400)
                      |++||+++++||.++|+  +  +| .+|||||++|+++||++|+||||+|||+|++.++.
T Consensus       192 D~~lve~~~~lp~~~k~--~--~~-~~K~iLR~a~~~~lP~~i~~R~K~~f~~g~g~~~~  246 (299)
T d1jgta1         192 DREVLDLLVSLEAGLKR--R--HG-RDKWVLRAAMADALPAETVNRPKLGVHEGSGTTSS  246 (299)
T ss_dssp             SHHHHHHHHHBCHHHHE--E--TT-EETHHHHHHHTTTSCHHHHHSCCC---------CH
T ss_pred             hHHHHHHHHhCcHHHhc--C--CC-CcchhhHHHHhcccCHHHhcCCCCCCCCCCCccHH
Confidence            99999999999999975  3  24 58999999999999999999999999999998653
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]} Back     information, alignment and structure
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure