Citrus Sinensis ID: 015813

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Protein Sequence
MSKTMSSTSTESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMNDVA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHcccccccEEEEEEEcccccHHcccccccHHHHHHHccccccccEEEEccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
msktmsststessdgdqaTVELIVcnsspsaadgggtasdeispllaqsekpktnifsvsytrrkprehvietdtSLTNCMLWVwngsrysgLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRrsgqpifgpmHARNLLVLRALVGFLSLFSFVYSIqrlplsqatvlsfTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQavsgglvkpgeaislnvrgSDHMLAVLVGLFSSITGGISYCLIKaganasdqplvTVFSFGilaspaagiclfffeefvlpsfYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGmglsriapsfgRLVGCVLILVSVFYTMyigpekemndva
Flexible Loop (DISEMBL)
msktmsststessdgdqATVELIVCNSSPSAADGGGTASDEISpllaqsekpktnifsvsytrrkprehvietdtsltncMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQavsgglvkpGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLektskvanVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMyigpekemndva
Low Complexity Region (SEG)
msktmsststessDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMNDVA
Disordered region (IsUnstruct)
********************************************************FSVSYT*****EHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIG*********
Disordered Region (DISOPRED)
**********************************************************************************WVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMY***********
Disordered Region (DISEMBL)
****************QATVELIVCNSSP*********SDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMNDVA
Disordered Region (DISPRO)
************SDGDQATVELIVCNSS**********SDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQ******************GSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKTMSSTSTESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMNDVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	400	2.2.26 [Sep-21-2011]
Q04835	414	Uncharacterized membrane	yes	no	0.69	0.666	0.255	2e-13
Q08980	353	Probable transport protei	no	no	0.685	0.776	0.232	2e-12
Q8BY79	368	Solute carrier family 35	yes	no	0.642	0.698	0.227	5e-09
Q2M3R5	365	Solute carrier family 35	yes	no	0.58	0.635	0.245	7e-09
Q5ZJZ4	411	Solute carrier family 35	no	no	0.635	0.618	0.229	0.0005

>sp|Q04835|YM87_YEAST Uncharacterized membrane protein YMR253C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR253C PE=1 SV=1

 Score = 77.4 bits (189), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 14/290 (4%)

Query: 110 SDVFMVQSIPLFETVFMRCTVTLI--LSYLWLRRS--GQPIFGPMHARNLLVLRALVGFL 165
            D+   + I   + + +R  +T I  L Y+++ +S      FG    R  LVLR   GF 
Sbjct: 96  DDIANDRQIKPLQILLVRMVITYIGTLIYMYINKSTISDVPFGKPEVRKWLVLRGCTGFF 155

Query: 166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
            +F   YS+  L +S A +++F AP +    + +ILRE+    E  G  +S  GV+ I R
Sbjct: 156 GVFGMYYSLMYLTISDAVLITFLAPSLTIFLSWVILRERFTKVEALGSLISLLGVVLIVR 215

Query: 226 RILTTQAVSGGLVKPGEAISLNVRGSD---HMLAVLVGLFSSITGGISYCLIK-AGANAS 281
                 +   G  +  ++ S  V  SD    ++A LVGL+  +     Y +I+  G  A 
Sbjct: 216 -----PSFLFGTPELTDSSSQIVESSDPKSRLIATLVGLWGVLGMSCVYIIIRYIGKRAH 270

Query: 282 DQPLVTVFSFGILASPAAGICLFFFEEFVLP-SFYSFLLMLVLSILAFFAEVLLARGLQL 340
               V+ FS         GI      +F +P S   ++L   L +  F  ++LL  G+Q 
Sbjct: 271 AIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQWILFGNLGVSGFIFQLLLTMGIQR 330

Query: 341 EKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYI 390
           E+  + + + Y ++     W + L +  P+    +G ++I+ +  + + I
Sbjct: 331 ERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIGMIIIISATLWVIRI 380

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q08980|YP264_YEAST Probable transport protein YPL264C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL264C PE=1 SV=1

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 123/280 (43%), Gaps = 6/280 (2%)

Query: 122 ETVFMRCTVTLILSYLWLRRSGQPI----FGPMHARNLLVLRALVGFLSLFSFVYSIQRL 177
           + + +R ++T   + +++  + Q +    +GP   R  L+LR ++GF  +F   +S+  L
Sbjct: 53  QILLVRMSITYCCTLVYMHWNKQSVPDIPWGPAPCRKWLILRGIMGFFGVFGMYFSLMYL 112

Query: 178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGL 237
            +S A +++F +P +    + ++L E     E  G  +SF GV+ I R        + G 
Sbjct: 113 SISDAVLITFMSPTLTIFLSFLLLGEPFSKLEALGSLISFSGVVLIIRPTFLFGEQTQGQ 172

Query: 238 VKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL-VTVFSFGILAS 296
             P + I         ++A+ V L         Y +I+   N +   + V+ FS      
Sbjct: 173 QSPQDDIVETQNPKLRLIAIGVSLLGVCGLSSVYIIIRYIGNKAHAIMSVSYFSLVTTVV 232

Query: 297 PAAGICLFFFEEFVLP-SFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVA 355
            A G+ L       LP S+  + L L L I  F  ++LL  G+Q E+  + + + Y +V 
Sbjct: 233 AALGVLLIPSMSLQLPHSWKQWGLFLNLGISGFIHQILLTMGIQRERAGRGSLMTYTQVI 292

Query: 356 LTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKE 395
               W + L    P+     G  +I+ S  + + +   K+
Sbjct: 293 YAVFWDVVLFHHWPNIWTWCGMAVIVSSTIWVINMRASKQ 332

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q8BY79|S35G1_MOUSE Solute carrier family 35 member G1 OS=Mus musculus GN=Slc35g1 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 126/272 (46%), Gaps = 15/272 (5%)

Query: 115 VQSIPLFETVFMRCTVTL--ILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
           VQ +   E    RC V +  I+  L  R++G    GP   R  L LR + G  ++    Y
Sbjct: 95  VQGVHAVEISAFRCVVQMLVIIPCLIYRKTG--FIGPKGQRLFLFLRGVFGSSAMILMYY 152

Query: 173 SIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQA 232
           + Q   L+ ATV++F+ P+  SI A I L+EK  + +      +  GV+ I R      +
Sbjct: 153 AFQTTSLADATVIAFSCPVFTSIFAWIFLKEKYSLWDAFFTLFAIAGVILIVRPPFIFGS 212

Query: 233 VSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFG 292
            + G+ +           S+H+      +  ++   I+  +++    + D   ++++ + 
Sbjct: 213 DTSGMRE---------SYSEHIKGTFAAIGHAVLAAITLVILRKMGKSVDY-FLSIWYYV 262

Query: 293 ILASPAAGICLFFFEEFVLP-SFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQY 351
           IL  P A I LF   E+ LP      L ++++ +L    ++ + + +Q+EK   VA ++ 
Sbjct: 263 ILGLPEAIIILFVIGEWSLPYCGLDRLFLILIGLLGLGGQIFITKAVQIEKAGLVAIMKT 322

Query: 352 IEVALTQLWGMGLSRIAPSFGRLVGCVLILVS 383
           +++    ++ +      P++  + G + ++VS
Sbjct: 323 MDIVFAFIFQIAFFDNVPTWWTVGGALCVVVS 354

Mus musculus (taxid: 10090)

>sp|Q2M3R5|S35G1_HUMAN Solute carrier family 35 member G1 OS=Homo sapiens GN=SLC35G1 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 21/253 (8%)

Query: 105 FMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGF 164
           F++ + DV  V+ I  F  VF    V   L Y   R++G    GP   R  L+LR ++G 
Sbjct: 88  FVKKVQDVHAVE-ISAFRCVFQMLVVIPCLIY---RKTG--FIGPKGQRIFLILRGVLGS 141

Query: 165 LSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF 224
            ++    Y+ Q + L+ ATV++F++P+  SI A I L+EK    +      +  GV+ I 
Sbjct: 142 TAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIV 201

Query: 225 RRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQP 284
           R      + + G+ +           S H+      + S++    +  +++    + D  
Sbjct: 202 RPPFLFGSDTSGMEE---------SYSGHLKGTFAAIGSAVFAASTLVILRKMGKSVDY- 251

Query: 285 LVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFF---AEVLLARGLQLE 341
            ++++ + +L    + I L    E+ LP  Y  L  L L  +  F    ++ + + LQ+E
Sbjct: 252 FLSIWYYVVLGLVESVIILSVLGEWSLP--YCGLDRLFLIFIGLFGLGGQIFITKALQIE 309

Query: 342 KTSKVANVQYIEV 354
           K   VA ++ ++V
Sbjct: 310 KAGPVAIMKTMDV 322

Homo sapiens (taxid: 9606)

>sp|Q5ZJZ4|S35G2_CHICK Solute carrier family 35 member G2 OS=Gallus gallus GN=SLC35G2 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 20/274 (7%)

Query: 117 SIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQR 176
            +P  E +F+R ++  +LS   +    +P FGP   R  L    +   +S+     S   
Sbjct: 129 KVPSLELIFIR-SILQVLSVTAVCYYHEPPFGPKGYRLRLFFYGVCNVISITCAYTSFSI 187

Query: 177 LPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSG 235
           +P S  T++   T  + ++I A +++ E +   +I  +  S FGV  +         +  
Sbjct: 188 VPPSNGTIMWRATTTVFSAILAFLLVDEGMASVDIVTVVGSVFGVCLVM--------IPN 239

Query: 236 GLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILA 295
            + +    +S       + + V+ GL ++++  I Y  IK   +        +F+F    
Sbjct: 240 IVKEENSLLSTWKEAFGYTMTVMAGLTTALSM-IVYRSIKDNISM----WTALFTFSWTG 294

Query: 296 SPAAGICLFFFEEFVLP---SFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYI 352
           +      +F  +E ++P     +S+LL + L   A F  V  A  L     + V+ VQ++
Sbjct: 295 TVWGASTMFLLQEPIVPLDGETWSYLLAICLCSTAAFLGVYYA--LSKFHPALVSTVQHL 352

Query: 353 EVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFY 386
           E+ +  +  + + RI P    LVG  +ILVSV +
Sbjct: 353 EIVIAMVLQLVVLRILPGTYDLVGGAVILVSVVF 386

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
225447127	390	PREDICTED: uncharacterized protein LOC10	0.965	0.989	0.698	1e-150
147835022	413	hypothetical protein VITISV_004002 [Viti	0.965	0.934	0.659	1e-146
224129018	393	predicted protein [Populus trichocarpa]	0.95	0.966	0.668	1e-144
255568715	425	Transmembrane protein, putative [Ricinus	0.91	0.856	0.652	1e-133
21554090	401	unknown [Arabidopsis thaliana]	0.96	0.957	0.616	1e-129
297831648	401	integral membrane family protein [Arabid	0.96	0.957	0.604	1e-128
18396156	401	nodulin MtN21 /EamA-like transporter pro	0.96	0.957	0.609	1e-128
449444715	392	PREDICTED: uncharacterized protein LOC10	0.967	0.987	0.562	1e-119
148910334	387	unknown [Picea sitchensis]	0.927	0.958	0.419	1e-77
357462229	475	Membrane protein, putative [Medicago tru	0.55	0.463	0.650	1e-73

>gi|225447127|ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera] gi|297739206|emb|CBI28857.3| unnamed protein product [Vitis vinifera]

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/391 (69%), Positives = 310/391 (79%), Gaps = 5/391 (1%)

Query: 9   STESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPRE 68
           S E+ D D   VELIVC++S S +      S+EI PLLA SEKPK NIFSVSY+RRKPRE
Sbjct: 3   SVETIDSDAPAVELIVCDASSSDSAANSVGSEEIEPLLAVSEKPKINIFSVSYSRRKPRE 62

Query: 69  HVIET--DTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFM 126
            V ++  D S T  +LW W+GSR SGL+CMALSSTIY  M+ +SD+F  QSIPLFET F 
Sbjct: 63  QVTKSAEDASFTQFILWAWSGSRCSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFT 122

Query: 127 RCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLS 186
           RCTVTLILSY WLRRSGQPIFGP H R+LLV RAL+G+LSL SFVY IQRLPLSQA VLS
Sbjct: 123 RCTVTLILSYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLS 182

Query: 187 FTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL 246
           FT PIMASI ARIIL EKL IAEIGGLA SF GVLFIFR IL  Q   GGL K  EA ++
Sbjct: 183 FTTPIMASIMARIILHEKLNIAEIGGLACSFIGVLFIFRPILAAQ---GGLPKAEEANNI 239

Query: 247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFF 306
            V GSDH+ AVLVGL SSI+GGISYCL +AGA ASDQP++TVF+FG+L SPAA IC F F
Sbjct: 240 YVGGSDHIYAVLVGLVSSISGGISYCLTRAGAKASDQPVITVFAFGMLGSPAAAICTFAF 299

Query: 307 EEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSR 366
           ++FVLPSFYSF LM++L++LAFFAEV LARGLQLEKTSK  N+QYIE AL+QLWG+G S+
Sbjct: 300 QDFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSKATNIQYIEAALSQLWGLGSSK 359

Query: 367 IAPSFGRLVGCVLILVSVFYTMYIGPEKEMN 397
           IAPSFGRLVGC LI  S   TMY GP+KEM 
Sbjct: 360 IAPSFGRLVGCFLIFASTCCTMYFGPDKEME 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147835022|emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/414 (65%), Positives = 310/414 (74%), Gaps = 28/414 (6%)

Query: 9   STESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPRE 68
           S E+ D D   VELIVC++S S +      S+EI PLLA SEKPK NIFSVSY+RRKPRE
Sbjct: 3   SXETIDSDAPAVELIVCDASSSDSAANSVGSEEIEPLLAVSEKPKINIFSVSYSRRKPRE 62

Query: 69  HVIET--DTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFM 126
            V ++  D S T  +LW W+GSR SGL+CMALSSTIY  M+ +SD+F  QSIPLFET F 
Sbjct: 63  QVTKSAEDASFTQFILWAWSGSRCSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFT 122

Query: 127 RCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLS 186
           RCTVTLILSY WLRRSGQPIFGP H R+LLV RAL+G+LSL SFVY IQRLPLSQA VLS
Sbjct: 123 RCTVTLILSYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLS 182

Query: 187 FTAPIMASIAARIILREKLKIAEIG-----------------------GLALSFFGVLFI 223
           FT PIMASI ARIIL EKL IAEIG                       GLA SF GVLFI
Sbjct: 183 FTTPIMASIMARIILHEKLNIAEIGELYTYFCEAGGETDCFVBCIYFPGLACSFIGVLFI 242

Query: 224 FRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQ 283
           FR IL  Q   GGL K  EA ++ V GSDH+ AVLVGL SSI+GGISYCL +AGA ASDQ
Sbjct: 243 FRPILAAQ---GGLPKAEEANNIYVGGSDHIYAVLVGLVSSISGGISYCLTRAGAKASDQ 299

Query: 284 PLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKT 343
           P++TVF+FG+L SPAA IC F F++FVLPSFYSF LM++L++LAFFAEV LARGLQLEKT
Sbjct: 300 PVITVFAFGMLGSPAAAICTFAFQDFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKT 359

Query: 344 SKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMN 397
           SK  N+QYIE AL+QLWG+G S+IAPSFGRLVGC LI  S   TMY GP+KEM 
Sbjct: 360 SKATNIQYIEAALSQLWGLGSSKIAPSFGRLVGCFLIFASTCCTMYFGPDKEME 413

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129018|ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1| predicted protein [Populus trichocarpa]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/398 (66%), Positives = 312/398 (78%), Gaps = 18/398 (4%)

Query: 11  ESSDGDQATVELIVCNSSPS-------AADGGGTASDEISPLLAQSEKPKTNIFSVSYTR 63
           E S+GD   VELIVC++S S       + DG   AS+EI+PLL    KPK NIFSVS++R
Sbjct: 3   EISNGDHDAVELIVCDASASELVPDEISGDGAVLASEEITPLL----KPKINIFSVSHSR 58

Query: 64  RKPREH---VIETDT-SLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIP 119
           RKPRE    + + +T  +T  +LW+W GSRYSGL+C+A+SSTIYF M+V+SD F  QSIP
Sbjct: 59  RKPREQGTKIPDIETFPVTQFVLWIWGGSRYSGLLCVAISSTIYFVMEVLSDFFSAQSIP 118

Query: 120 LFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPL 179
           LFET F RCT+TLILSYLWLR +GQPIFGP HAR  L  RAL G LSL SF+Y I+RLPL
Sbjct: 119 LFETAFARCTITLILSYLWLRGNGQPIFGPAHARKFLFSRALTGCLSLLSFIYCIRRLPL 178

Query: 180 SQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVK 239
           SQA VLSFT PIMASI ARIIL EKLKI ++GGLA SFFGVLFIFR+ILTTQ   G L++
Sbjct: 179 SQAIVLSFTTPIMASIVARIILHEKLKIVDVGGLACSFFGVLFIFRQILTTQ---GALLR 235

Query: 240 PGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAA 299
            GE   + + G +H+L VLV LFSSITGGISYCL+KAGA ASDQPL TVFSFGILA+PA 
Sbjct: 236 VGETNYIAIMGRNHVLTVLVALFSSITGGISYCLVKAGAKASDQPLATVFSFGILATPAT 295

Query: 300 GICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQL 359
           G+C F FEEFVLP+FY+F LML+L +L+F AEV  ARGLQLEKTSK ANV Y+EVAL+QL
Sbjct: 296 GMCAFAFEEFVLPNFYTFFLMLILGLLSFSAEVFFARGLQLEKTSKAANVLYMEVALSQL 355

Query: 360 WGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMN 397
           WG+G  RI PSFG LVGC+LIL+SV  T+YIGPEKEM 
Sbjct: 356 WGIGSWRITPSFGGLVGCLLILISVCCTIYIGPEKEME 393

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568715|ref|XP_002525329.1| Transmembrane protein, putative [Ricinus communis] gi|223535388|gb|EEF37062.1| Transmembrane protein, putative [Ricinus communis]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/394 (65%), Positives = 299/394 (75%), Gaps = 30/394 (7%)

Query: 7   STSTESSDGDQATVELIVCNSS----------PSAADGG---GTASDEISPLLAQSEKPK 53
           + S E  DGD A VELIVCNSS           S AD G   G+ SDEI+PLL    KPK
Sbjct: 2   AASAEIIDGDHA-VELIVCNSSSSSSSSSSSPDSFADNGNPTGSPSDEITPLL----KPK 56

Query: 54  TNIFSVSYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVI 109
            NIFSVS++RRKPRE V    ET+T      +LWVW+GSRYSG++CMALSS+IYF M+++
Sbjct: 57  INIFSVSHSRRKPREQVAKLPETETPPFIQLILWVWSGSRYSGILCMALSSSIYFVMEIL 116

Query: 110 SDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFS 169
           S  F  +SIPLFET FMRCT+ LILSY+WLRRSGQPIFG +HAR LL LRAL GFLSL S
Sbjct: 117 SHSFSTRSIPLFETAFMRCTIVLILSYIWLRRSGQPIFGAVHARKLLFLRALTGFLSLLS 176

Query: 170 FVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILT 229
           F+Y IQRLP SQA +L+FT PI+ASI AR++L EKLKIA+IGGL  SFFGVLFI+R+IL 
Sbjct: 177 FIYCIQRLPFSQAIILNFTTPIVASILARLMLHEKLKIADIGGLTCSFFGVLFIYRQILR 236

Query: 230 TQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVF 289
           TQA        GEA + +  GS H+ AVL GL S ITGGISYC IKAGA ASDQP+VTVF
Sbjct: 237 TQA--------GEANNTSASGSHHVYAVLAGLLSLITGGISYCFIKAGAKASDQPVVTVF 288

Query: 290 SFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANV 349
           SFG+L+SPAAGIC F FEEFV+P F SFLLML+L +LAF  EVLLARGLQLEK SK  NV
Sbjct: 289 SFGLLSSPAAGICAFAFEEFVVPDFCSFLLMLILGVLAFIVEVLLARGLQLEKISKATNV 348

Query: 350 QYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVS 383
           QYIE AL+QLWG+  SRI+ SF  LVGC+LI++S
Sbjct: 349 QYIEAALSQLWGIDSSRISSSFAGLVGCLLIIIS 382

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554090|gb|AAM63171.1| unknown [Arabidopsis thaliana]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/402 (61%), Positives = 302/402 (75%), Gaps = 18/402 (4%)

Query: 5   MSSTSTESSDGDQA-TVELIVCN-SSP---SAADGGGTASDEISPLLAQSEKPKTNIFSV 59
           M+S+S E+   D+  ++EL V +  SP   SA+     +SDEI PLL Q+++P+ NIFS 
Sbjct: 1   MASSSPETRIADEHLSLELTVRDLESPALESASSAPELSSDEIIPLLNQNQRPRINIFSA 60

Query: 60  SYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMV 115
           SYTRRKPRE VI   ET+ S LT    W+W+GSRYSGL+CMALSST+Y  M+++SD F V
Sbjct: 61  SYTRRKPREQVIKVTETEISPLTQFSSWIWSGSRYSGLLCMALSSTLYLIMELVSDTFSV 120

Query: 116 QSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQ 175
           Q IPLFET FMRCT+ LILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ
Sbjct: 121 QPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQ 180

Query: 176 RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSG 235
            LPLSQA VLSF  PIMASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q    
Sbjct: 181 MLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQV--- 237

Query: 236 GLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILA 295
           GL    E    N++ + H+ A L+GLFSSITGGI+YCLIKA A AS+QP++TV SFG++A
Sbjct: 238 GLEGKNE----NLKENHHIYAFLLGLFSSITGGITYCLIKAAAKASEQPVITVLSFGLVA 293

Query: 296 SPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVA 355
            PA  IC+F FE FVLP+F + + M+VL +LAF AEVLLARGLQLEK SK ANV YIEV 
Sbjct: 294 CPATAICMFSFESFVLPAFDTLVSMIVLGLLAFCAEVLLARGLQLEKISKAANVLYIEVV 353

Query: 356 LTQLWGMGLSRIAPS--FGRLVGCVLILVSVFYTMYIGPEKE 395
           L+QLW +   +      F RLVGC+LIL+SV YT+YIGP K+
Sbjct: 354 LSQLWLVSTGKTGSPGLFSRLVGCLLILLSVGYTVYIGPAKD 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831648|ref|XP_002883706.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297329546|gb|EFH59965.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/402 (60%), Positives = 301/402 (74%), Gaps = 18/402 (4%)

Query: 5   MSSTSTESSDGDQA-TVELIVCN-SSPSAADGGG---TASDEISPLLAQSEKPKTNIFSV 59
           M+S+S E+   D+   +EL V +  SP+  D      ++SDEI PLL Q+++P+ NIFS 
Sbjct: 1   MASSSPETRITDEHLALELTVRDLESPALEDASSAPESSSDEIIPLLNQNQRPRINIFSA 60

Query: 60  SYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMV 115
           SYTR KPRE VI   ET+ S +T    W+W+GSRYSGL+CM LSST+Y  M+++SD F V
Sbjct: 61  SYTRHKPREQVIKVTETEISPVTQFSSWIWSGSRYSGLLCMVLSSTLYLIMELVSDTFSV 120

Query: 116 QSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQ 175
           Q IPLFET FMRCT+ LILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ
Sbjct: 121 QPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQ 180

Query: 176 RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSG 235
            LPLSQA VLSF  PIMASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q  S 
Sbjct: 181 MLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQVGS- 239

Query: 236 GLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILA 295
                 E  + N++G+ H+ A  +GLFSSITGGI+YCLIKA A AS+QP++TVFSFG++A
Sbjct: 240 ------EGTNENLKGNHHIYAFWLGLFSSITGGITYCLIKAAAKASEQPVITVFSFGLVA 293

Query: 296 SPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVA 355
            PAA IC+F FE FVLP+F + + M+VL +LAF AEVLLARGLQLEK SK AN+ YIEV 
Sbjct: 294 CPAAAICMFSFESFVLPAFDTLITMIVLGLLAFCAEVLLARGLQLEKISKAANILYIEVV 353

Query: 356 LTQLWGMGLSRIAPS--FGRLVGCVLILVSVFYTMYIGPEKE 395
           L+QLW +   +      F RLVGC+LIL+SV YT+Y+GP K+
Sbjct: 354 LSQLWIVSTGKAGSPGLFSRLVGCLLILISVSYTVYMGPAKD 395

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396156|ref|NP_565328.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|20198220|gb|AAM15467.1| Expressed protein [Arabidopsis thaliana] gi|109134115|gb|ABG25056.1| At2g05755 [Arabidopsis thaliana] gi|110738794|dbj|BAF01320.1| hypothetical protein [Arabidopsis thaliana] gi|330250873|gb|AEC05967.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/402 (60%), Positives = 301/402 (74%), Gaps = 18/402 (4%)

Query: 5   MSSTSTESSDGDQA-TVELIVCNSSPSAADGGGTA----SDEISPLLAQSEKPKTNIFSV 59
           M+S+S E+   D+  ++EL V +   +A +   +A    SDEI PLL Q+++P+ NIFS 
Sbjct: 1   MASSSPETRIADEHLSLELTVRDLESTALESASSAPELSSDEIIPLLNQNQRPRINIFSA 60

Query: 60  SYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMV 115
           SYTRRKP E VI   ET+ S +T    W+W+GSRYSGL+CMALSST+Y  M+++SD F V
Sbjct: 61  SYTRRKPSEQVIKVTETEISPVTQFSSWIWSGSRYSGLLCMALSSTLYLIMELVSDTFSV 120

Query: 116 QSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQ 175
           Q IPLFET FMRCT+ LILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ
Sbjct: 121 QPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQ 180

Query: 176 RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSG 235
            LPLSQA VLSF  PIMASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q    
Sbjct: 181 MLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQV--- 237

Query: 236 GLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILA 295
           GL    E    N++G+ H+ A L+GLFSSITGGI+YCLIKA A AS+QP++TV SFG++A
Sbjct: 238 GLEGKNE----NLKGNHHIYAFLLGLFSSITGGITYCLIKAAAKASEQPVITVLSFGLVA 293

Query: 296 SPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVA 355
            PA  IC+F FE FVLP+F + + M+VL +LAF AEVLLARGLQLEK SK ANV YIEV 
Sbjct: 294 CPATAICMFSFESFVLPAFDTLVSMIVLGLLAFCAEVLLARGLQLEKISKAANVLYIEVV 353

Query: 356 LTQLWGMGLSRIAPS--FGRLVGCVLILVSVFYTMYIGPEKE 395
           L+QLW +   +      F RLVGC+LIL+SV YT+YIGP K+
Sbjct: 354 LSQLWLVSTGKTGSPGLFSRLVGCLLILLSVGYTVYIGPAKD 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444715|ref|XP_004140119.1| PREDICTED: uncharacterized protein LOC101208388 [Cucumis sativus] gi|449481153|ref|XP_004156097.1| PREDICTED: uncharacterized protein LOC101226055 [Cucumis sativus]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/393 (56%), Positives = 277/393 (70%), Gaps = 6/393 (1%)

Query: 9   STESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPRE 68
            ++ + G    VELIV    PS AD     S+EI+PLL Q EKPK NIF++SY RR P E
Sbjct: 2   DSDMNSGVDHLVELIVREEPPSIADDV-PISEEIAPLLTQIEKPKINIFTISYPRRTPME 60

Query: 69  HVIETD----TSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETV 124
            V +      +SL+  ++W+W+GSRYSGL+C +LSS  YF M+V+  VF  QSIP+ E  
Sbjct: 61  QVNKVHDSDVSSLSQSIIWIWSGSRYSGLLCASLSSIFYFAMEVLMGVFSAQSIPIIEMA 120

Query: 125 FMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATV 184
           F RC +  ILSYLWLRRS QPIFG  H R LLV RAL G LS+ SF+YSI+RL +SQA V
Sbjct: 121 FTRCVIITILSYLWLRRSEQPIFGQPHVRKLLVSRALTGLLSMMSFIYSIRRLHISQAIV 180

Query: 185 LSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAI 244
           LSFT PI+AS+AAR IL EK K ++ GGLA SF GVL IF+ + T+Q    GL K G+  
Sbjct: 181 LSFTTPILASVAARFILNEKFKFSDFGGLACSFLGVLLIFQDLFTSQGTEAGLTKAGKGS 240

Query: 245 SLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLF 304
           +    GS H  AVLVG  +SI G +SYCLI+A A ASDQP+VTVFSFG+LA P  GIC  
Sbjct: 241 TTPSLGSHHAYAVLVGFVASIAGAVSYCLIRASAKASDQPVVTVFSFGLLAGPVTGICTV 300

Query: 305 FFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGL 364
            FE+ VLPS YSFL+MLVL +LAF AEV  ARGLQLEKTSKV N++++E +L QLW +G+
Sbjct: 301 VFEDLVLPSVYSFLVMLVLGLLAFLAEVCWARGLQLEKTSKVNNLRFMEASLVQLWHIGI 360

Query: 365 SRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMN 397
             + P FGR+VG +LI +S+ +T Y+GP+KEM 
Sbjct: 361 LGVVP-FGRIVGTLLIFLSLCWTFYVGPDKEME 392

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148910334|gb|ABR18246.1| unknown [Picea sitchensis]

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 161/384 (41%), Positives = 241/384 (62%), Gaps = 13/384 (3%)

Query: 16  DQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSY--TRRKPREHV-IE 72
           D+    L+V + S  A       +D ++P     +  K +IFSVS+   R K R +  +E
Sbjct: 8   DEEIRPLMVSSPSTVANSIVEVTTDTLAP-----QCLKMSIFSVSHGTARSKERRNKPME 62

Query: 73  TD-TSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVT 131
            D T+L+  ++W W GSRYSG++CMALSS +Y  M +  ++F   S P +ET+F+RC V 
Sbjct: 63  ADFTALSEFLIWAWGGSRYSGMVCMALSSLMYSIMGLFVELFAATSAPSYETIFIRCAVI 122

Query: 132 LILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPI 191
           L+ +++WLR++GQP+FG  H   LL+ RA+ G+LSL  F YSIQ LPL  A VL+FT P 
Sbjct: 123 LVAAFIWLRKTGQPLFGLPHVWRLLMARAITGYLSLLGFFYSIQVLPLHDAIVLNFTTPF 182

Query: 192 MASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGS 251
           MA+I A  IL+EKL + E+GG+  +F G+  +++ I   Q   G   +   +  L++ G 
Sbjct: 183 MAAILASFILQEKLGVIELGGIFCNFLGIFLVYQPIPFLQ---GQRPESNGSTGLDIPGR 239

Query: 252 DHML-AVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFV 310
            + + ++L+ L S++TGG +YC I+A A AS+QPLVTVF+F  +A P+A +C+F F++FV
Sbjct: 240 QYYIHSILIALLSAVTGGANYCFIRAAAKASEQPLVTVFAFAAVACPSAAMCMFLFQKFV 299

Query: 311 LPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPS 370
           LP  Y F+ M+++S+LAF AEVLLARGLQLEK S+  +  YIE   + + G+      PS
Sbjct: 300 LPGIYPFIGMVIISLLAFVAEVLLARGLQLEKASRATSNLYIEAFASHVLGIMFLGQTPS 359

Query: 371 FGRLVGCVLILVSVFYTMYIGPEK 394
              L G  +I++S     Y G +K
Sbjct: 360 VSGLFGAAIIIISTMAVSYFGNDK 383

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462229|ref|XP_003601396.1| Membrane protein, putative [Medicago truncatula] gi|355490444|gb|AES71647.1| Membrane protein, putative [Medicago truncatula]

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/223 (65%), Positives = 172/223 (77%), Gaps = 3/223 (1%)

Query: 175 QRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVS 234
           Q+LP  QA VL+ T PIMAS+ AR  LREKLKIA+I  LA SFFGVLF FR +L TQ   
Sbjct: 256 QKLPFVQAVVLNSTTPIMASVMARFFLREKLKIADIASLACSFFGVLFFFREMLATQ--- 312

Query: 235 GGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGIL 294
           G L K  EA + N + +  + A+LVG+FSSI GG SYCLIKAGA ASDQPL+TVFSFGIL
Sbjct: 313 GQLDKVDEASNANAKPTHQIFAILVGIFSSIIGGTSYCLIKAGAKASDQPLLTVFSFGIL 372

Query: 295 ASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEV 354
           ASPA GIC + FE+FVLP+  S LLM+VL ILAFFAEVLLARGLQLE+  KVAN+QY+E 
Sbjct: 373 ASPAMGICTYAFEDFVLPTVQSILLMVVLGILAFFAEVLLARGLQLERMGKVANIQYMEA 432

Query: 355 ALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMN 397
           ALTQ W + L+ ++P+F  LVG +LI+VSV  TMYIGP+KEM 
Sbjct: 433 ALTQFWSLTLTLVSPAFDHLVGILLIVVSVCCTMYIGPDKEME 475

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
TAIR|locus:505006238	401	AT2G05755 [Arabidopsis thalian	0.93	0.927	0.623	3.3e-118
DICTYBASE|DDB_G0282673	510	DDB_G0282673 "Uncharacterized	0.66	0.517	0.290	1.1e-21
DICTYBASE|DDB_G0292606	698	tmem20 "EamA-like transporter	0.715	0.409	0.273	9.5e-21
CGD|CAL0006171	460	orf19.2204 [Candida albicans (	0.675	0.586	0.276	3.1e-19
UNIPROTKB|Q5A2K2	460	CaO19.2204 "Putative uncharact	0.675	0.586	0.276	3.1e-19
UNIPROTKB|G4NII1	438	MGG_09833 "Uncharacterized pro	0.272	0.248	0.360	2.2e-18
SGD|S000004866	414	YMR253C "Putative protein of u	0.685	0.661	0.258	3.7e-16
SGD|S000006185	353	YPL264C "Putative membrane pro	0.687	0.779	0.265	1.6e-15
UNIPROTKB|Q47WD7	291	CPS_4235 "Membrane protein" [C	0.265	0.364	0.324	6.1e-15
TIGR_CMR|CPS_4235	291	CPS_4235 "membrane protein" [C	0.265	0.364	0.324	6.1e-15

TAIR|locus:505006238 AT2G05755 [Arabidopsis thaliana (taxid:3702)]

 Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
 Identities = 240/385 (62%), Positives = 292/385 (75%)

Query:    17 QATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVI---ET 73
             + TV  +   +  SA+     +SDEI PLL Q+++P+ NIFS SYTRRKP E VI   ET
Sbjct:    18 ELTVRDLESTALESASSAPELSSDEIIPLLNQNQRPRINIFSASYTRRKPSEQVIKVTET 77

Query:    74 DTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTL 132
             + S +T    W+W+GSRYSGL+CMALSST+Y  M+++SD F VQ IPLFET FMRCT+ L
Sbjct:    78 EISPVTQFSSWIWSGSRYSGLLCMALSSTLYLIMELVSDTFSVQPIPLFETAFMRCTIIL 137

Query:   133 ILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIM 192
             ILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ LPLSQA VLSF  PIM
Sbjct:   138 ILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQMLPLSQAIVLSFLNPIM 197

Query:   193 ASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSD 252
             ASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q    GL    E    N++G+ 
Sbjct:   198 ASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQV---GLEGKNE----NLKGNH 250

Query:   253 HMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLP 312
             H+ A L+GLFSSITGGI+YCLIKA A AS+QP++TV SFG++A PA  IC+F FE FVLP
Sbjct:   251 HIYAFLLGLFSSITGGITYCLIKAAAKASEQPVITVLSFGLVACPATAICMFSFESFVLP 310

Query:   313 SFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRI-APS- 370
             +F + + M+VL +LAF AEVLLARGLQLEK SK ANV YIEV L+QLW +   +  +P  
Sbjct:   311 AFDTLVSMIVLGLLAFCAEVLLARGLQLEKISKAANVLYIEVVLSQLWLVSTGKTGSPGL 370

Query:   371 FGRLVGCVLILVSVFYTMYIGPEKE 395
             F RLVGC+LIL+SV YT+YIGP K+
Sbjct:   371 FSRLVGCLLILLSVGYTVYIGPAKD 395

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

DICTYBASE|DDB_G0282673 DDB_G0282673 "Uncharacterized membrane protein YMR253C" [Dictyostelium discoideum (taxid:44689)]

 Score = 271 (100.5 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 82/282 (29%), Positives = 138/282 (48%)

Query:    84 VWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMR---CTVTLILSYLWLR 140
             +W  S++ G++ + LS+ ++  M  ++   + + +   E  F R   C +  +L    L+
Sbjct:   211 IW--SKFQGIILLVLSTGLFSVM-ALAVKQLSKELSSLEIAFFRSFYCFIGCLLILFPLK 267

Query:   141 RSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARII 200
              +  P+ GP   R  L LR L G + L ++ YSI  LPLS+A ++SFT+P+M +  A ++
Sbjct:   268 IN--PL-GPKEKRLFLSLRGLSGTIGLCAYFYSITVLPLSEAVIISFTSPVMTAALAAVL 324

Query:   201 LREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDH-MLAVLV 259
             L+EK    +     LS  G+  I +               G   S +  G  H +L +  
Sbjct:   325 LKEKWGPVQAICAFLSLCGITVISKPSFLFHDDHND----GSTAS-HAEGDPHKLLYIFT 379

Query:   260 GLFSSITGGISYCLI-KAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFL 318
             G+  +  G ISY  + K G N     LVT FS G LAS       F F+ F  PS  ++ 
Sbjct:   380 GIIGAFFGAISYIAVRKVGPNVHAFVLVTYFS-G-LASLVTFPSAFIFQTFKWPSLKAWG 437

Query:   319 LMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLW 360
              + ++ +    A+  + RG+QLEK +K A + Y+++  T +W
Sbjct:   438 WITLMGVFGTVAQGAVNRGIQLEKAAKAAAMNYLQIIFTFIW 479

GO:0016020 "membrane" evidence=IEA

DICTYBASE|DDB_G0292606 tmem20 "EamA-like transporter Tmem20" [Dictyostelium discoideum (taxid:44689)]

 Score = 267 (99.0 bits), Expect = 9.5e-21, P = 9.5e-21
 Identities = 83/303 (27%), Positives = 147/303 (48%)

Query:    92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMH 151
             GL+ +  ++ ++ FM  +  +   +   L E  FMR    LI   + L    +   GP +
Sbjct:   406 GLILLVFAAFLFSFMAYLVKLISKEFDSL-EIAFMRSFYGLIGCIIILFSLRENPLGPKN 464

Query:   152 ARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIG 211
              R  L  R L G +SL ++ Y++  LPLS+A ++SFT+P++ +  A ++L+EK    E  
Sbjct:   465 VRWFLAARGLSGAISLCAYFYTLTVLPLSEAVIISFTSPVITAALAAVVLKEKWGGIEAI 524

Query:   212 GLALSFFGVLFIFR-RILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGIS 270
                LS  GV+ + +   L      G   + GE        S  +L VL+G+  +    +S
Sbjct:   525 CAFLSLCGVVVVSKPSFLFHHHTDGSTTENGE-------DSGKLLYVLIGVGGAFFTAVS 577

Query:   271 YCLIKAGANASDQPLVTVFSFGILASPAAGICL---FFFEEFVLPSFYSFLLMLVLSILA 327
             Y  ++     S  P V V  F  ++S    +CL   F F+ FV PS  ++  + ++ ++A
Sbjct:   578 YIAVRK-VGPSVNPFVLVIYFSAVSS---ALCLPSSFAFQTFVWPSLKAWGYITLIGVVA 633

Query:   328 FFAEVLLARGLQL-EKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFY 386
               A+  +  G+QL +KTS  A + Y+++  T +W + L      +  ++G +LIL     
Sbjct:   634 TIAQGAVNAGIQLSKKTSTAAAMNYLQIIFTFIWQITLMHQPLDWITILGALLILCCAGI 693

Query:   387 TMY 389
             T +
Sbjct:   694 TAF 696

GO:0016020 "membrane" evidence=IEA

CGD|CAL0006171 orf19.2204 [Candida albicans (taxid:5476)]

 Score = 251 (93.4 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 78/282 (27%), Positives = 127/282 (45%)

Query:   122 ETVFMRCTVTLI--LSYLWLRRSGQPI-FGPMHARNLLVLRALVGFLSLFSFVYSIQRLP 178
             + +F+R  +T I  L Y+ + RS     FGP   R LL+LR LVGF  +F   +S+Q L 
Sbjct:   140 QILFVRMFITYICCLLYMAITRSVPDAPFGPKPIRKLLLLRGLVGFFGVFGMYFSLQYLS 199

Query:   179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLV 238
             LS A  L+F  P++ +  A ++L EK  I E      S  GV+ I +        S    
Sbjct:   200 LSDAVALTFLVPMVTAFLAFVLLHEKYSILEAICSVFSLAGVVLIAKPTFIFGNESNKET 259

Query:   239 KPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLI--KAGANASDQPLVTVFSFGILAS 296
                E I  +      +LA +VGL   + G  S  ++  K G NA   PL++V  F +   
Sbjct:   260 GNDETIESS-SSEKRILATIVGLIG-VCGASSVYIVLRKIGMNA--HPLLSVSYFALTCC 315

Query:   297 PAAGICLFFFEE--FVLPS-FYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIE 353
                 + +       FVLP+  Y + L  ++    FF +  L  G+Q  K ++ + + Y  
Sbjct:   316 IVTFLAILVIPSLTFVLPTNAYQWTLFFIIGFSGFFMQFSLTAGVQRVKAARASLMAYSG 375

Query:   354 VALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKE 395
             +    +W + +    P     +G  LI+ +    +   P++E
Sbjct:   376 MIFAVVWDLTIWHHFPGILSFLGITLIIGNAIIILKFKPQQE 417

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A2K2 CaO19.2204 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 251 (93.4 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 78/282 (27%), Positives = 127/282 (45%)

Query:   122 ETVFMRCTVTLI--LSYLWLRRSGQPI-FGPMHARNLLVLRALVGFLSLFSFVYSIQRLP 178
             + +F+R  +T I  L Y+ + RS     FGP   R LL+LR LVGF  +F   +S+Q L 
Sbjct:   140 QILFVRMFITYICCLLYMAITRSVPDAPFGPKPIRKLLLLRGLVGFFGVFGMYFSLQYLS 199

Query:   179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLV 238
             LS A  L+F  P++ +  A ++L EK  I E      S  GV+ I +        S    
Sbjct:   200 LSDAVALTFLVPMVTAFLAFVLLHEKYSILEAICSVFSLAGVVLIAKPTFIFGNESNKET 259

Query:   239 KPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLI--KAGANASDQPLVTVFSFGILAS 296
                E I  +      +LA +VGL   + G  S  ++  K G NA   PL++V  F +   
Sbjct:   260 GNDETIESS-SSEKRILATIVGLIG-VCGASSVYIVLRKIGMNA--HPLLSVSYFALTCC 315

Query:   297 PAAGICLFFFEE--FVLPS-FYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIE 353
                 + +       FVLP+  Y + L  ++    FF +  L  G+Q  K ++ + + Y  
Sbjct:   316 IVTFLAILVIPSLTFVLPTNAYQWTLFFIIGFSGFFMQFSLTAGVQRVKAARASLMAYSG 375

Query:   354 VALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKE 395
             +    +W + +    P     +G  LI+ +    +   P++E
Sbjct:   376 MIFAVVWDLTIWHHFPGILSFLGITLIIGNAIIILKFKPQQE 417

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G4NII1 MGG_09833 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 163 (62.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
 Identities = 40/111 (36%), Positives = 53/111 (47%)

Query:   117 SIPLFETVFMRCTVTLILS--YLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSI 174
             S      +F+R   T IL   Y+W +      FG    R LL+LR   GF  L    YS+
Sbjct:   102 SFHALHVIFVRMLATAILGLLYMWWKSVPDAPFGDRRVRGLLLLRGASGFSGLLGLYYSL 161

Query:   175 QRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
               LPLS AT +SF  P + +I   + L+E +   E     L+F GVL I R
Sbjct:   162 SYLPLSDATFISFIIPAITAIVCFVFLKEPMSKHETFAGVLAFTGVLLIAR 212

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

SGD|S000004866 YMR253C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 224 (83.9 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 75/290 (25%), Positives = 134/290 (46%)

Query:   111 DVFMVQSIPLFETVFMRCTVTLI--LSYLWLRRS--GQPIFGPMHARNLLVLRALVGFLS 166
             D+   + I   + + +R  +T I  L Y+++ +S      FG    R  LVLR   GF  
Sbjct:    97 DIANDRQIKPLQILLVRMVITYIGTLIYMYINKSTISDVPFGKPEVRKWLVLRGCTGFFG 156

Query:   167 LFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKL-KIAEIGGLALSFFGVLFIFR 225
             +F   YS+  L +S A +++F AP +    + +ILRE+  K+  +G L +S  GV+ I R
Sbjct:   157 VFGMYYSLMYLTISDAVLITFLAPSLTIFLSWVILRERFTKVEALGSL-ISLLGVVLIVR 215

Query:   226 RILTTQAVSGGLVKPGEAISLNVRGSD---HMLAVLVGLFSSITGGISYCLIK-AGANAS 281
                   +   G  +  ++ S  V  SD    ++A LVGL+  +     Y +I+  G  A 
Sbjct:   216 -----PSFLFGTPELTDSSSQIVESSDPKSRLIATLVGLWGVLGMSCVYIIIRYIGKRAH 270

Query:   282 DQPLVTVFSFGILASPAAGICLFFFEEFVLP-SFYSFLLMLVLSILAFFAEVLLARGLQL 340
                 V+ FS         GI      +F +P S   ++L   L +  F  ++LL  G+Q 
Sbjct:   271 AIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQWILFGNLGVSGFIFQLLLTMGIQR 330

Query:   341 EKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYI 390
             E+  + + + Y ++     W + L +  P+    +G ++I+ +  + + I
Sbjct:   331 ERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIGMIIIISATLWVIRI 380

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008150 "biological_process" evidence=ND

SGD|S000006185 YPL264C "Putative membrane protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 216 (81.1 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 75/282 (26%), Positives = 126/282 (44%)

Query:   124 VFMRCTVTLILSYL-WLRRSGQPI-FGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQ 181
             V M  T    L Y+ W ++S   I +GP   R  L+LR ++GF  +F   +S+  L +S 
Sbjct:    57 VRMSITYCCTLVYMHWNKQSVPDIPWGPAPCRKWLILRGIMGFFGVFGMYFSLMYLSISD 116

Query:   182 ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPG 241
             A +++F +P +    + ++L E     E  G  +SF GV+ I R        + G   P 
Sbjct:   117 AVLITFMSPTLTIFLSFLLLGEPFSKLEALGSLISFSGVVLIIRPTFLFGEQTQGQQSPQ 176

Query:   242 EAISLNVRGSDHMLAVLVGLFSSITGGIS-YCLIKAGANASDQPL-VTVFSFGILASPAA 299
             + I         ++A+ V L   + G  S Y +I+   N +   + V+ FS       A 
Sbjct:   177 DDIVETQNPKLRLIAIGVSLLG-VCGLSSVYIIIRYIGNKAHAIMSVSYFSLVTTVVAAL 235

Query:   300 GICLFFFEEFVLP-SFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQ 358
             G+ L       LP S+  + L L L I  F  ++LL  G+Q E+  + + + Y +V    
Sbjct:   236 GVLLIPSMSLQLPHSWKQWGLFLNLGISGFIHQILLTMGIQRERAGRGSLMTYTQVIYAV 295

Query:   359 LWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMNDVA 400
              W + L    P+     G  +I+ S  + + +   K+ N VA
Sbjct:   296 FWDVVLFHHWPNIWTWCGMAVIVSSTIWVINMRASKQ-NVVA 336

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISM

UNIPROTKB|Q47WD7 CPS_4235 "Membrane protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 157 (60.3 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
 Identities = 35/108 (32%), Positives = 61/108 (56%)

Query:   118 IPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL 177
             IP+ E V  R  V+ I+SY  ++R    ++G  H + LL+ R  VG  +L    Y++  L
Sbjct:    38 IPVLEIVAARAIVSGIISYADIKRKKISLWG--HNKALLIARGTVGSFALMFVYYAVTTL 95

Query:   178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
             PL++ATVL +  P+  ++ A   L+E ++ + I  +A+S  G+  I +
Sbjct:    96 PLAEATVLQYLHPVFTAVLAVFFLKETIQRSTIACIAISLLGLFIIIQ 143

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_4235 CPS_4235 "membrane protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 157 (60.3 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
 Identities = 35/108 (32%), Positives = 61/108 (56%)

Query:   118 IPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL 177
             IP+ E V  R  V+ I+SY  ++R    ++G  H + LL+ R  VG  +L    Y++  L
Sbjct:    38 IPVLEIVAARAIVSGIISYADIKRKKISLWG--HNKALLIARGTVGSFALMFVYYAVTTL 95

Query:   178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
             PL++ATVL +  P+  ++ A   L+E ++ + I  +A+S  G+  I +
Sbjct:    96 PLAEATVLQYLHPVFTAVLAVFFLKETIQRSTIACIAISLLGLFIIIQ 143

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025940001 SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (389 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	400
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	2e-14
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-10
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	6e-05
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	6e-04

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 73.4 bits (180), Expect = 2e-14
 Identities = 55/302 (18%), Positives = 114/302 (37%), Gaps = 24/302 (7%)

Query: 91  SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPM 150
            GL+ + L   ++    +   + +    P      +R  +  +L    L    + +   +
Sbjct: 7   LGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPAL 66

Query: 151 HARN-LLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIIL-REKLKIA 208
                LL+L  L   L       +++    S A+++    P+  ++ A ++L  E+L + 
Sbjct: 67  RPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL 126

Query: 209 EIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGG 268
           +I G+ L+  GVL I         +S                   +L +L+ L +++   
Sbjct: 127 QILGILLALAGVLLILLGGGGGGILS-------------------LLGLLLALAAALLWA 167

Query: 269 ISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILA- 327
           +   L+K  +     P+       +L +    +  F           ++LL+L L + + 
Sbjct: 168 LYTALVKRLSRLG--PVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFST 225

Query: 328 FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYT 387
             A +L    L+L   S VA +  +E     L G+ L     S  +L+G  L+++ V   
Sbjct: 226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLA 285

Query: 388 MY 389
             
Sbjct: 286 SL 287

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 2/115 (1%)

Query: 113 FMVQSIPLFETVFMRCTVT--LILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSF 170
            +++ I        R  +   L++  L+L R    +        LL L      L    +
Sbjct: 12  KLLERISPLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILALLYLGLFGTALGYLLY 71

Query: 171 VYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
            Y+++ +  S A+V++  +P+   I + ++L EKL + ++ G+ L   GVL I  
Sbjct: 72  FYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 61/282 (21%), Positives = 104/282 (36%), Gaps = 41/282 (14%)

Query: 112 VFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV 171
            ++   +PL+  VF R    L+L  L L R   P         LL+L AL   +    + 
Sbjct: 10  QYLEGQVPLYFAVFRRLIFALLL-LLPLLRRRPP---LKRLLRLLLLGALQIGVFYVLYF 65

Query: 172 YSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQ 231
            +++RLP+ +A +L + AP+  ++ + ++ +E+                     R L   
Sbjct: 66  VAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERP--------------------RKLVLL 105

Query: 232 AVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANA------SDQPL 285
           A   GL   G  + L+        A   GL   +  GIS+ L              +   
Sbjct: 106 AAVLGLA--GAVLLLSDGNLSINPA---GLLLGLGSGISFALGTVLYKRLVKKEGPELLQ 160

Query: 286 VTVFSFGILASPAAGICLFFFEEFVLPSF---YSFLLMLVLSILAFFAEVLLARGLQLEK 342
            T +   + A        F        S        L L+ + LA+F   L  +GL L  
Sbjct: 161 FTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYF---LWNKGLTLVD 217

Query: 343 TSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSV 384
            S  + +   E  +  L G+ +     S  +L+G  LI+ +V
Sbjct: 218 PSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%)

Query: 92  GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMH 151
           GL+    ++ ++     +              +       L+L   +L   G PI     
Sbjct: 155 GLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAW 214

Query: 152 ARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIG 211
              LL L      L+   + Y+++ L  S   +LS   P+ A++   ++L E L  A++ 
Sbjct: 215 LL-LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLL 273

Query: 212 GLALSFFGVLFIFRR 226
           G AL   GVL    R
Sbjct: 274 GAALVVLGVLLASLR 288

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	400
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.98
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.94
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.93
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.92
COG2962	293	RarD Predicted permeases [General function predict	99.91
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.83
KOG2765	416	consensus Predicted membrane protein [Function unk	99.8
COG2510	140	Predicted membrane protein [Function unknown]	99.67
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.61
COG2510	140	Predicted membrane protein [Function unknown]	99.61
KOG1581	327	consensus UDP-galactose transporter related protei	99.55
KOG1580	337	consensus UDP-galactose transporter related protei	99.55
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.54
KOG2766	336	consensus Predicted membrane protein [Function unk	99.53
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.52
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.51
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.5
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.46
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.45
PRK11689	295	aromatic amino acid exporter; Provisional	99.35
PLN00411	358	nodulin MtN21 family protein; Provisional	99.33
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.31
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.27
PRK11272	292	putative DMT superfamily transporter inner membran	99.27
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.27
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.26
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.25
PRK13499	345	rhamnose-proton symporter; Provisional	99.24
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.21
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.17
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.16
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.15
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.11
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.09
PRK15430	296	putative chloramphenical resistance permease RarD;	98.96
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.95
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.95
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.92
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.91
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.89
KOG1582	367	consensus UDP-galactose transporter related protei	98.88
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.87
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.85
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.82
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.8
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.78
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.67
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.64
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.6
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.56
COG2962	293	RarD Predicted permeases [General function predict	98.54
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.51
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.5
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.42
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	98.23
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.16
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.13
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	98.04
PRK10650	109	multidrug efflux system protein MdtI; Provisional	98.01
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.97
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.92
COG2076	106	EmrE Membrane transporters of cations and cationic	97.89
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.88
PRK11431	105	multidrug efflux system protein; Provisional	97.84
PRK13499	345	rhamnose-proton symporter; Provisional	97.8
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.77
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.71
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.68
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.66
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.61
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.58
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.47
KOG1581	327	consensus UDP-galactose transporter related protei	97.41
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.37
KOG2765	416	consensus Predicted membrane protein [Function unk	97.37
COG2076	106	EmrE Membrane transporters of cations and cationic	97.3
PRK11431	105	multidrug efflux system protein; Provisional	97.23
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.2
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.13
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.12
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.04
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.86
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.86
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.79
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.71
KOG1580	337	consensus UDP-galactose transporter related protei	96.53
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	96.38
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	95.69
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.3
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.17
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.12
KOG1582	367	consensus UDP-galactose transporter related protei	93.19
KOG1443	349	consensus Predicted integral membrane protein [Fun	92.02
PRK02237	109	hypothetical protein; Provisional	91.52
KOG4831	125	consensus Unnamed protein [Function unknown]	91.08
KOG2766	336	consensus Predicted membrane protein [Function unk	91.04
PRK02237	109	hypothetical protein; Provisional	91.03
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	90.52
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	88.5
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	87.3
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	87.06
KOG3912	372	consensus Predicted integral membrane protein [Gen	86.49
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	85.66
COG1742	109	Uncharacterized conserved protein [Function unknow	85.11
KOG4831	125	consensus Unnamed protein [Function unknown]	84.84
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	84.5
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	84.03
COG1742	109	Uncharacterized conserved protein [Function unknow	81.78
TIGR02865	764	spore_II_E stage II sporulation protein E. Stage I	81.42
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	80.44

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=6.8e-33  Score=264.63  Aligned_cols=305  Identities=14%  Similarity=0.124  Sum_probs=229.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCC-CC--cCchhHHHHHHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQ-PI--FGPMHARNLLVLRALVGFL  165 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~  165 (400)
                      ..+-++.|++.-++++...++.|.+...+++|+.+.++|+.++.++++++.+.+++ +.  +..++.+..+.+.++.++.
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~   90 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSM   90 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHH
Confidence            45678899999999999999999998889999999999999999888887654332 21  1223444556666666666


Q ss_pred             HHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHH------hcCcCcHHHHHHHHHHHHhhhhhhcccccccccc--CCC
Q 015813          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARII------LREKLKIAEIGGLALSFFGVLFIFRRILTTQAVS--GGL  237 (400)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~------l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~--~~~  237 (400)
                      .+.+++++++++++++++++.+++|+++.++++++      +|||+++++++|++++++|+.++..++......+  ++.
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            77789999999999999999999999999999999      6999999999999999999998775432110000  000


Q ss_pred             cCCCccc-ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCc--c----
Q 015813          238 VKPGEAI-SLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEF--V----  310 (400)
Q Consensus       238 ~~~~~~~-~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----  310 (400)
                      .+-.+.. +......+...|++++++++++||+|+++.|+..++.++.....+++.+++.+...+.....++.  .    
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~  250 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWII  250 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccccee
Confidence            0000000 00011122356999999999999999999998766555544545555555554444433333221  1    


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHc
Q 015813          311 LPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYI  390 (400)
Q Consensus       311 ~~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~  390 (400)
                      ..+.. +..+++.++++.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|+++..+.
T Consensus       251 ~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        251 HFDIT-LITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             ccchH-HHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            12323 33466777777889999999999999999999999999999999999999999999999999999999998876


Q ss_pred             CCcc
Q 015813          391 GPEK  394 (400)
Q Consensus       391 ~~~~  394 (400)
                      ++++
T Consensus       330 ~~~~  333 (358)
T PLN00411        330 KANE  333 (358)
T ss_pred             hhhh
Confidence            5544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1e-32  Score=259.30  Aligned_cols=287  Identities=14%  Similarity=0.085  Sum_probs=219.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFS  169 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (400)
                      .+++++++.++++||.+.+..|... ++++|+...++|+.++.++++++..+  ++  .+++.++..+.+++.....+.+
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~l~~~~~~~~   77 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTVGF--PR--LRQFPKRYLLAGGLLFVSYEIC   77 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHccc--cc--cccccHHHHHHHhHHHHHHHHH
Confidence            4578899999999999999999986 88999999999999999888766421  11  1222334455566666666777


Q ss_pred             HHHHHh----ccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccc
Q 015813          170 FVYSIQ----RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAIS  245 (400)
Q Consensus       170 ~~~al~----~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~  245 (400)
                      ++.+++    .+++.+++++.++.|+++.+++++++|||+++++++|++++++|++++..++.....          ...
T Consensus        78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~----------~~~  147 (295)
T PRK11689         78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSL----------AEL  147 (295)
T ss_pred             HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchh----------hhh
Confidence            777775    468888999999999999999999999999999999999999999999866421100          000


Q ss_pred             cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCc-cCCCHHHHHHHHHHH
Q 015813          246 LNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEF-VLPSFYSFLLMLVLS  324 (400)
Q Consensus       246 ~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g  324 (400)
                      ++ ....+..|++++++++++||+|.++.||..++.+ +...  .+...+..+ .+.....+++ ...+...|..+++.+
T Consensus       148 ~~-~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~--~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~~  222 (295)
T PRK11689        148 IN-NIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITL--FFILTALAL-WIKYFLSPQPAMVFSLPAIIKLLLAA  222 (295)
T ss_pred             hh-ccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhH--HHHHHHHHH-HHHHHHhcCccccCCHHHHHHHHHHH
Confidence            00 0012356999999999999999999999765433 3332  222222222 2222222222 235677888888888


Q ss_pred             HHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcccc
Q 015813          325 ILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEM  396 (400)
Q Consensus       325 v~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  396 (400)
                      +.+.++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++...+++++++
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~~~~~  294 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATRRKRR  294 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHhHhcc
Confidence            767999999999999999999999999999999999999999999999999999999999888877655443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=2e-31  Score=250.24  Aligned_cols=276  Identities=16%  Similarity=0.097  Sum_probs=222.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHH-HHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALV-GFLSLFSF  170 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  170 (400)
                      -.+..++..++||.+.++.|... ++++|.++.++|+.++.++++++...++++.. +++.+......+.. ...++.++
T Consensus         9 ~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~   86 (292)
T PRK11272          9 LFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGHPLP-TLRQWLNAALIGLLLLAVGNGMV   86 (292)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            34668888999999999999886 79999999999999999888887766554432 33444444444444 45678888


Q ss_pred             HHHH-hccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccC
Q 015813          171 VYSI-QRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVR  249 (400)
Q Consensus       171 ~~al-~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (400)
                      +++. ++++++.++++.++.|+++.+++.+ +|||+++++++|++++++|+.++..++..                    
T Consensus        87 ~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------------------  145 (292)
T PRK11272         87 TVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------------------  145 (292)
T ss_pred             HHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------------------
Confidence            9999 9999999999999999999999985 79999999999999999999988643211                    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcC-cc-CCCHHHHHHHHHHHHHH
Q 015813          250 GSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEE-FV-LPSFYSFLLMLVLSILA  327 (400)
Q Consensus       250 ~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~gv~~  327 (400)
                       .....|++++++++++||.+.+..|+..+ .++. ....+....+.+...+.....+. +. .++...|..++++++++
T Consensus       146 -~~~~~G~l~~l~a~~~~a~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~  222 (292)
T PRK11272        146 -SGNPWGAILILIASASWAFGSVWSSRLPL-PVGM-MAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFG  222 (292)
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHHHhcCC-Ccch-HHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHH
Confidence             12347999999999999999999999654 3333 33445555555555444433332 22 24678899999999886


Q ss_pred             -HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          328 -FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       328 -~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                       .+++.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++++.|+++..+++++
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence             899999999999999999999999999999999999999999999999999999999998876554

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=5.5e-31  Score=248.13  Aligned_cols=276  Identities=16%  Similarity=0.181  Sum_probs=212.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHH-HHHHHHHH
Q 015813           93 LMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVG-FLSLFSFV  171 (400)
Q Consensus        93 ~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  171 (400)
                      .++.++++++||...++.|... ++++|.++.++|+.++.+.++++..+++.       .++.....++.. ...+.+++
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~   77 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFVARPKV-------PLNLLLGYGLTISFGQFAFLF   77 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHhcCCCC-------chHHHHHHHHHHHHHHHHHHH
Confidence            4678899999999999999987 78999999999999987666555432111       122233334433 34455778


Q ss_pred             HHHhc-cchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCC
Q 015813          172 YSIQR-LPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRG  250 (400)
Q Consensus       172 ~al~~-~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (400)
                      .++++ .|+++++++.++.|+++.+++++++|||+++++++|++++++|+.++..++...                   .
T Consensus        78 ~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-------------------~  138 (299)
T PRK11453         78 CAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG-------------------Q  138 (299)
T ss_pred             HHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC-------------------c
Confidence            88887 689999999999999999999999999999999999999999999988543110                   1


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCh--HHHHHHHHHHHHHHHHHHHHhhcC-------ccCCCHHHHHHHH
Q 015813          251 SDHMLAVLVGLFSSITGGISYCLIKAGANASDQP--LVTVFSFGILASPAAGICLFFFEE-------FVLPSFYSFLLML  321 (400)
Q Consensus       251 ~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~  321 (400)
                      ..+..|++++++++++||.+.++.|+..++.+.+  .....+..+.+.+.........++       +...+...|..++
T Consensus       139 ~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  218 (299)
T PRK11453        139 HVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLM  218 (299)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHH
Confidence            2245799999999999999999999975433222  222233333333222222222221       2245678899999


Q ss_pred             HHHHHH-HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCccc
Q 015813          322 VLSILA-FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKE  395 (400)
Q Consensus       322 ~~gv~~-~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  395 (400)
                      ++|+++ .++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.++.|+
T Consensus       219 ~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~~~~  293 (299)
T PRK11453        219 YLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLRWRK  293 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchhhhc
Confidence            999886 89999999999999999999999999999999999999999999999999999999988876655333

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=4.7e-31  Score=248.13  Aligned_cols=275  Identities=14%  Similarity=0.089  Sum_probs=209.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCc-----CchhHHHHHHHHHHH
Q 015813           88 SRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIF-----GPMHARNLLVLRALV  162 (400)
Q Consensus        88 ~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  162 (400)
                      ++.+|.+++++++++|+...+..|..  .+++|.++.++|+.++.+++.++...++++..     +.++.+.....+++.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL   82 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence            45679999999999999999999984  57999999999999998877666544332111     112223334566777


Q ss_pred             HHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCc
Q 015813          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGE  242 (400)
Q Consensus       163 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  242 (400)
                      .+..+.++++|++++|+++++++.++.|+++.+++++++|||+++++++|++++++|+.++..++.              
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~--------------  148 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG--------------  148 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC--------------
Confidence            888999999999999999999999999999999999999999999999999999999999875421              


Q ss_pred             ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHhhcCcc--CCCH-HHHH
Q 015813          243 AISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQ-PLVTVFSFGILASPAAGICLFFFEEFV--LPSF-YSFL  318 (400)
Q Consensus       243 ~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~  318 (400)
                              ..    .+++++++++||+|.+..|+..++... ......+....+.....  ........  ..++ ..+.
T Consensus       149 --------~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  214 (296)
T PRK15430        149 --------SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLF--AIADSSTSHMGQNPMSLNL  214 (296)
T ss_pred             --------Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH--HHccCCcccccCCcHHHHH
Confidence                    00    146788999999999999986432111 11112222222222211  11111111  1122 2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          319 LMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       319 ~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      .++..|+.+.++|.+|++++++.++++++++.+++|+++.+++++++||++++.+++|+++|+.|+.+...+..
T Consensus       215 ~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~  288 (296)
T PRK15430        215 LLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI  288 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            55556666789999999999999999999999999999999999999999999999999999988888776543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=1.3e-30  Score=244.74  Aligned_cols=277  Identities=13%  Similarity=0.049  Sum_probs=218.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFS  169 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (400)
                      ..|+.+++++.++|+....+.|... +++||.++.++|++++.++++++.++++++  .+++.++..+..++.....+.+
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~   87 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAIFKPWRLR--FAKEQRLPLLFYGVSLGGMNYL   87 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHhHHhcc--CCHHHHHHHHHHHHHHHHHHHH
Confidence            4589999999999999999999987 679999999999999998888776543322  2334445566667777888899


Q ss_pred             HHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccC
Q 015813          170 FVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVR  249 (400)
Q Consensus       170 ~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (400)
                      ++++++++|++.++++.++.|+++.+++    +|++++  ..++.++++|+.++..++...                   
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~-------------------  142 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDV-------------------  142 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCc-------------------
Confidence            9999999999999999999999998886    366554  456778899999887543211                   


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHH-H
Q 015813          250 GSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILA-F  328 (400)
Q Consensus       250 ~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~-~  328 (400)
                      +..+..|++++++++++||.|.+..|+..++.+ +.... +..+.+.++..+.....+.....+...|..++++|+++ .
T Consensus       143 ~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        143 SHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             ccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHH
Confidence            112457999999999999999999999765433 44433 34444444444433333222234566777778999886 9


Q ss_pred             HHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcccc
Q 015813          329 FAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEM  396 (400)
Q Consensus       329 ~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  396 (400)
                      ++|.+|++++++.++++++++.+++|+++.+++++++||++++.+++|+++|+.|+++..++.+|+.|
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999887766444

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.98  E-value=6.7e-30  Score=236.27  Aligned_cols=257  Identities=21%  Similarity=0.239  Sum_probs=212.4

Q ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhH
Q 015813          103 YFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQA  182 (400)
Q Consensus       103 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a  182 (400)
                      ||.+.+..|...++..|+.+..+.|.+.+.+++.+...++    ..++++.+....+++...+.+.++++|+++++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~   76 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA   76 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence            7888899999765678999999999999988887766554    233455566677777788999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCchhHHHHHHHHH
Q 015813          183 TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLF  262 (400)
Q Consensus       183 ~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~  262 (400)
                      +++.++.|+++.+++++++|||+++++++|++++++|+.++..++..                     ..+..|++++++
T Consensus        77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~---------------------~~~~~G~~~~l~  135 (260)
T TIGR00950        77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL---------------------SINPAGLLLGLG  135 (260)
T ss_pred             HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc---------------------cccHHHHHHHHH
Confidence            99999999999999999999999999999999999999998754311                     234689999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCChH-HHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcc
Q 015813          263 SSITGGISYCLIKAGANASDQPL-VTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILA-FFAEVLLARGLQL  340 (400)
Q Consensus       263 aa~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~-~~~~~~~~~al~~  340 (400)
                      ++++|+.+.+..|+..++.++.. ....+....+.+...+.....++....+...|..+++.++++ .++|.+|++++++
T Consensus       136 a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  215 (260)
T TIGR00950       136 SGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTL  215 (260)
T ss_pred             HHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999765433222 222234555555555444444333344677888889999886 8999999999999


Q ss_pred             cCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHH
Q 015813          341 EKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSV  384 (400)
Q Consensus       341 ~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~  384 (400)
                      .++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       216 ~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       216 VDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999886

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.97  E-value=1.6e-32  Score=238.61  Aligned_cols=294  Identities=22%  Similarity=0.338  Sum_probs=248.4

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHH
Q 015813           87 GSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLS  166 (400)
Q Consensus        87 ~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (400)
                      ..+++|.++..++.++-.. .++.+..  -..+|.+..-.|++.-.+..++....++.....+...+++++++|+.++.+
T Consensus        34 d~p~~gl~l~~vs~ff~~~-~vv~t~~--~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   34 DKPNLGLLLLTVSYFFNSC-MVVSTKV--LENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTG  110 (346)
T ss_pred             CCCccCceehhhHHHHhhH-HHhhhhh--hccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhH
Confidence            3467888888888444444 4444443  368999999999777777776665555555556666678899999999999


Q ss_pred             HHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCccccc
Q 015813          167 LFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (400)
Q Consensus       167 ~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~  246 (400)
                      ..+.||+++|.+.++|++++++.|+|+.++++.++|||.++.+.++..+.+.||+++.+|.+.+..       +.++.++
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~-------~t~g~~~  183 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGD-------TTEGEDS  183 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCC-------Ccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999876543       1122111


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCC-CHHHHHHHHHHHH
Q 015813          247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLP-SFYSFLLMLVLSI  325 (400)
Q Consensus       247 ~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gv  325 (400)
                       .....+.+|...++.+++..|..+++.|+..| ..+....+.|+.+.+++...+.....+.++.| ...+|...+-+|+
T Consensus       184 -s~~~~~~~gt~aai~s~lf~asvyIilR~iGk-~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGv  261 (346)
T KOG4510|consen  184 -SQVEYDIPGTVAAISSVLFGASVYIILRYIGK-NAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGV  261 (346)
T ss_pred             -ccccccCCchHHHHHhHhhhhhHHHHHHHhhc-cccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehh
Confidence             12245667899999999999999999999876 46677788899999999988888777788877 6789999999999


Q ss_pred             HHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          326 LAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       326 ~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      +++++|.+.+.++|+..|.++++..+.+.+++++|.++++++.|+++++.|+++|+.+.++...++-
T Consensus       262 fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  262 FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999888876653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=4e-27  Score=222.41  Aligned_cols=282  Identities=12%  Similarity=0.037  Sum_probs=214.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHh-hCCCCcCchhHHHHHHHHHHHHHHHHHHHHH
Q 015813           94 MCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRR-SGQPIFGPMHARNLLVLRALVGFLSLFSFVY  172 (400)
Q Consensus        94 ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (400)
                      .+.+...++-...++..|.+..+-.+|..+.++|+.++.+.+.+.... .+++...+++.++.++..+++.+..+.+.++
T Consensus         5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   84 (302)
T TIGR00817         5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNV   84 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445666666677778899987333779999999999988776555221 1222223455677777778888888999999


Q ss_pred             HHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCch
Q 015813          173 SIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSD  252 (400)
Q Consensus       173 al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (400)
                      ++++++++.++++.++.|+++.+++++++|||+++++++|++++++|+.+....+.                      ..
T Consensus        85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~----------------------~~  142 (302)
T TIGR00817        85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL----------------------SF  142 (302)
T ss_pred             HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc----------------------cc
Confidence            99999999999999999999999999999999999999999999999987542211                      22


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccC-CCChHHHHHHHHHHHHHHHHHHHHhhcCccCC--CH----------HHHHH
Q 015813          253 HMLAVLVGLFSSITGGISYCLIKAGANA-SDQPLVTVFSFGILASPAAGICLFFFEEFVLP--SF----------YSFLL  319 (400)
Q Consensus       253 ~~~G~l~~l~aa~~~a~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~  319 (400)
                      +..|++++++++++||++.++.|+..++ +.++.....++...+.+...+.....++.+..  +.          ..+..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            4579999999999999999999997651 23456677787777777666665544332211  00          11111


Q ss_pred             HHHHHHHH-HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCccccc
Q 015813          320 MLVLSILA-FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMN  397 (400)
Q Consensus       320 l~~~gv~~-~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~~  397 (400)
                      .+..+..+ ...+.++++++++.+|++.++..+++|+++++++++++||++++.+++|+++++.|+++..+.+.+|++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~~  301 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKP  301 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcCC
Confidence            22222222 3333566789999999999999999999999999999999999999999999999999999877666554

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=4.5e-27  Score=219.66  Aligned_cols=269  Identities=14%  Similarity=0.068  Sum_probs=200.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhh--CCC-CcCchhHHHHHHHHHHHHHHHHHH
Q 015813           93 LMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRS--GQP-IFGPMHARNLLVLRALVGFLSLFS  169 (400)
Q Consensus        93 ~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~  169 (400)
                      .++.+.++++|+..++..|... ++-++.  .+++.....+++.++...+  +++ ...+++++...+.+++.....+.+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA-DKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG   79 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC-CchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999654 444443  4777777776776665543  222 222345566777788888899999


Q ss_pred             HHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccC
Q 015813          170 FVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVR  249 (400)
Q Consensus       170 ~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (400)
                      +++++++.+++.++++.++.|+++.+++++++|||+++++++|+++++.|+.++..++..                    
T Consensus        80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--------------------  139 (281)
T TIGR03340        80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--------------------  139 (281)
T ss_pred             HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc--------------------
Confidence            999999999999999999999999999999999999999999999999999988765311                    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHH---HHHHH-HHHHHHHHHhhcCcc-CCCHHHHHHHHHHH
Q 015813          250 GSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFS---FGILA-SPAAGICLFFFEEFV-LPSFYSFLLMLVLS  324 (400)
Q Consensus       250 ~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g  324 (400)
                       ..+..|+.++++++++|++|.+..|+..++.++......+   ..+.. .+.... ....+... .+....+..+++.+
T Consensus       140 -~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  217 (281)
T TIGR03340       140 -QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLL-YLKRHGRSMFPYARQILPSATLG  217 (281)
T ss_pred             -ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHH-HHHHhccchhhhHHHHHHHHHHH
Confidence             1123688899999999999999998854322211111111   11111 111111 11111111 12223444555555


Q ss_pred             HH-HHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHH
Q 015813          325 IL-AFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFY  386 (400)
Q Consensus       325 v~-~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~  386 (400)
                      .+ +.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++
T Consensus       218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            44 589999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.96  E-value=9.3e-27  Score=214.71  Aligned_cols=243  Identities=15%  Similarity=0.104  Sum_probs=186.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCC-----C---cCchhHHHHHHHHHHH
Q 015813           91 SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQP-----I---FGPMHARNLLVLRALV  162 (400)
Q Consensus        91 ~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~  162 (400)
                      +|.+++++++++||...++.|.+  .+++|.++.++|++++.+++.++...++++     .   ..+++++.....+++.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            58999999999999999999983  469999999999999988877665332211     0   1122234456777888


Q ss_pred             HHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCc
Q 015813          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGE  242 (400)
Q Consensus       163 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  242 (400)
                      ...++.++++|++++++++++++.++.|+++.+++++++|||++++++++++++++|+.++..++.              
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~--------------  145 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG--------------  145 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC--------------
Confidence            889999999999999999999999999999999999999999999999999999999998875421              


Q ss_pred             ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCc--cC-CCHHHHHH
Q 015813          243 AISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEF--VL-PSFYSFLL  319 (400)
Q Consensus       243 ~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~  319 (400)
                              ...    +++++++++||.|.+..|+..+ .+.. ..... .....+............  .. +...+|.+
T Consensus       146 --------~~~----~~~l~aa~~~a~~~i~~~~~~~-~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T TIGR00688       146 --------SLP----WEALVLAFSFTAYGLIRKALKN-TDLA-GFCLE-TLSLMPVAIYYLLQTDFATVQQTNPFPIWLL  210 (256)
T ss_pred             --------Cch----HHHHHHHHHHHHHHHHHhhcCC-CCcc-hHHHH-HHHHHHHHHHHHHHhccCcccccCchhHHHH
Confidence                    001    3578899999999999999653 3322 22211 122222222111111111  11 22247888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHH
Q 015813          320 MLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGL  364 (400)
Q Consensus       320 l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~  364 (400)
                      +++.|+++.++|.++++++|+.++++++++.|++|+++.+++.++
T Consensus       211 l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       211 LVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            889998889999999999999999999999999999999999765

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=2.4e-25  Score=213.55  Aligned_cols=277  Identities=12%  Similarity=0.090  Sum_probs=214.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCC-HHHHHHHHHHHHHHHHHHHHHh-hCC-CCcC-chhHHHHHHHHHHHHHHH
Q 015813           91 SGLMCMALSSTIYFFMQVISDVFMVQSIP-LFETVFMRCTVTLILSYLWLRR-SGQ-PIFG-PMHARNLLVLRALVGFLS  166 (400)
Q Consensus        91 ~G~ll~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~-~~~-~~~~-~~~~~~~~~~~~~~~~~~  166 (400)
                      +-.++.+.+..+-.......|.+. +.+| |..+.++|++++.+++.+.... .++ ++.. +++.++.++..++++...
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~  127 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFV  127 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            455677777888888899999987 7789 9999999999998765544322 111 1121 344567777888888877


Q ss_pred             HHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCccccc
Q 015813          167 LFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (400)
Q Consensus       167 ~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~  246 (400)
                      +...+.++++++++.++++..+.|+++++++++++|||++++++++++++++|+.+....+.                  
T Consensus       128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~------------------  189 (350)
T PTZ00343        128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL------------------  189 (350)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc------------------
Confidence            77788999999999999999999999999999999999999999999999999999875331                  


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCC------ChHHHHHHHHHHHHHHHHHHHHhhcCcc----------
Q 015813          247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASD------QPLVTVFSFGILASPAAGICLFFFEEFV----------  310 (400)
Q Consensus       247 ~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  310 (400)
                          ..++.|+++++++++++|++.++.|+..++.+      +......+..+.+.++.++.....+...          
T Consensus       190 ----~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~  265 (350)
T PTZ00343        190 ----HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTA  265 (350)
T ss_pred             ----hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhh
Confidence                22568999999999999999999999775432      2332333345666666555544333211          


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHH----HhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHH
Q 015813          311 LPSFYSFLLMLVLSILAFFAEVLLAR----GLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFY  386 (400)
Q Consensus       311 ~~~~~~~~~l~~~gv~~~~~~~~~~~----al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~  386 (400)
                      ..+...+..+++..+++++.+.+++.    ++++.+|.+.++..+++|+++++++++++||++++.+++|+++++.|+++
T Consensus       266 ~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        266 NMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence            01111223334444456888888884    99999999999999999999999999999999999999999999999998


Q ss_pred             HHHc
Q 015813          387 TMYI  390 (400)
Q Consensus       387 ~~~~  390 (400)
                      ..+.
T Consensus       346 Ys~~  349 (350)
T PTZ00343        346 YSLF  349 (350)
T ss_pred             Hhhc
Confidence            8754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.95  E-value=3e-24  Score=201.24  Aligned_cols=279  Identities=20%  Similarity=0.209  Sum_probs=222.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCC-CCcCchhHHHHHHHHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQ-PIFGPMHARNLLVLRALVGFLSL  167 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  167 (400)
                      ...+..+.+...+.|+......|.......++....+.|...+.+...+...+++. +....++.++..+.+++.....+
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPF   84 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence            45678889999999999999999986233778888888999998885444444321 22222224567777888888999


Q ss_pred             HHHHHHHhccchhhHHHHHhhHHHHHHHHHH-HHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCccccc
Q 015813          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAAR-IILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (400)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~-~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~  246 (400)
                      .+++.++++++++.++++.++.|+++.++++ +++|||+++++++++++++.|+.++..++.....              
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~--------------  150 (292)
T COG0697          85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI--------------  150 (292)
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh--------------
Confidence            9999999999999999999999999999997 6679999999999999999999999988744211              


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHH-HHHHHHHHHHHHHHHhhcCc-cCCCHHHHHHHHHHH
Q 015813          247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVF-SFGILASPAAGICLFFFEEF-VLPSFYSFLLMLVLS  324 (400)
Q Consensus       247 ~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g  324 (400)
                          . ...|+++++++++++|++.+..|+..  ..+...... +... .... ........+. ...+...|..+.+.|
T Consensus       151 ----~-~~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g  221 (292)
T COG0697         151 ----L-SLLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLL-LALL-LLLLFFLSGFGAPILSRAWLLLLYLG  221 (292)
T ss_pred             ----H-HHHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHH-HHHH-HHHHHHhccccccCCHHHHHHHHHHH
Confidence                1 56899999999999999999999876  233333333 2322 1111 1111112222 245677899999999


Q ss_pred             HHH-HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHc
Q 015813          325 ILA-FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYI  390 (400)
Q Consensus       325 v~~-~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~  390 (400)
                      +++ .+++.++++++++.++.+++.+.+++|+++.++++++++|+++..+++|+.+++.|+.+...+
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         222 VFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            887 689999999999999999999999999999999999999999999999999999999998877

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.94  E-value=2.4e-24  Score=201.62  Aligned_cols=287  Identities=15%  Similarity=0.139  Sum_probs=225.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcC--chhHHHHHHHHHHHHHHHHH
Q 015813           91 SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFG--PMHARNLLVLRALVGFLSLF  168 (400)
Q Consensus        91 ~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  168 (400)
                      .|.++.++-+..-.++..+.+.  .-+.|.+|..+...++..+.......+++++.+.  .++.++..++.+++...+++
T Consensus        17 lgQ~lsl~~~~t~~~s~~l~~~--~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~   94 (334)
T PF06027_consen   17 LGQVLSLCITGTGTFSSLLANK--GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANY   94 (334)
T ss_pred             HHHHHHHHHHhHHHHHHHHHhc--CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHH
Confidence            4666666666666666666555  3578889998888877776655444554432221  23344556666899999999


Q ss_pred             HHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCccccccc
Q 015813          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNV  248 (400)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (400)
                      +.+.|++|++.+.++++..+..+++++++++++|||+++.|++|++++++|+.++...|....+             ++.
T Consensus        95 ~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~-------------~~~  161 (334)
T PF06027_consen   95 LVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGS-------------DSS  161 (334)
T ss_pred             HHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccc-------------cCC
Confidence            9999999999999999999999999999999999999999999999999999999887754311             112


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcC--cc--CCCHHHHHHHHHHH
Q 015813          249 RGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEE--FV--LPSFYSFLLMLVLS  324 (400)
Q Consensus       249 ~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~l~~~g  324 (400)
                      .+++...|++++++++++||+++++.++..|+. +........++.+.++..+.....+.  +.  ..+...+.+++..+
T Consensus       162 ~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~  240 (334)
T PF06027_consen  162 SGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA  240 (334)
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH
Confidence            345678999999999999999999999988754 45566666777777776665554431  11  12445566666666


Q ss_pred             HHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          325 ILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       325 v~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                      ++.++-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|.++.+..+++
T Consensus       241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            666889999999999999999999999999999999999999999999999999999999998876543

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.93  E-value=2.7e-23  Score=180.15  Aligned_cols=275  Identities=13%  Similarity=0.064  Sum_probs=224.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHH
Q 015813           93 LMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY  172 (400)
Q Consensus        93 ~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (400)
                      ++.++.+.+.--....+.|.++ +..++..++.+|..++.++++++++..+++  ..++.+..+..-|++....|.+||.
T Consensus        14 ~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RPwr~r--~~~~~~~~~~~yGvsLg~MNl~FY~   90 (292)
T COG5006          14 ILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLALFRPWRRR--LSKPQRLALLAYGVSLGGMNLLFYL   90 (292)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhHHHhc--cChhhhHHHHHHHHHHHHHHHHHHH
Confidence            5667777777778888899987 899999999999999999888876644332  3355677788889999999999999


Q ss_pred             HHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCch
Q 015813          173 SIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSD  252 (400)
Q Consensus       173 al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (400)
                      +++++|.+.+..+.++.|+.+.+++      .-+.++.+.+.+++.|+.++.-.+..                   ....
T Consensus        91 si~riPlGiAVAiEF~GPL~vA~~~------sRr~~d~vwvaLAvlGi~lL~p~~~~-------------------~~~l  145 (292)
T COG5006          91 SIERIPLGIAVAIEFTGPLAVALLS------SRRLRDFVWVALAVLGIWLLLPLGQS-------------------VWSL  145 (292)
T ss_pred             HHHhccchhhhhhhhccHHHHHHHh------ccchhhHHHHHHHHHHHHhheeccCC-------------------cCcC
Confidence            9999999999999999999988876      34567788888899999887644422                   1245


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHH-HHHH
Q 015813          253 HMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILA-FFAE  331 (400)
Q Consensus       253 ~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~-~~~~  331 (400)
                      +..|..+++.++.||+.|.+..||..+ .++........+..+.++...+..........++.-...-+..++++ .+.|
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccch
Confidence            679999999999999999999999774 45555555555566665555555444444455677777778888997 9999


Q ss_pred             HHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcccc
Q 015813          332 VLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEM  396 (400)
Q Consensus       332 ~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  396 (400)
                      .+-..++++.+....+.++.+||.++.+.|++++||++|+.|++|+.+|+.+..-..+..+|+.+
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~~  289 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPAV  289 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999998877666555544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.92  E-value=3.4e-22  Score=186.91  Aligned_cols=274  Identities=14%  Similarity=0.053  Sum_probs=208.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (400)
                      +++++++++++||...+..|...  +.++.++.  |..++.+++..+....+.+.+..++.+...++.|+....++.+++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~~   77 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQF   77 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhHH
Confidence            67899999999999999999853  68887775  677777666554433332223335566667788888999999999


Q ss_pred             HHHhccchhhHHHHHh-hHHHHHHHHHHHHhcCcCcHHH----HHHHHHHHHhhhhhhccccccccccCCCcCCCccccc
Q 015813          172 YSIQRLPLSQATVLSF-TAPIMASIAARIILREKLKIAE----IGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (400)
Q Consensus       172 ~al~~~~~~~a~~l~~-~~P~~~~ll~~~~l~e~~~~~~----~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~  246 (400)
                      .++++++.+.+.++.. +.++++.+.+.+++|||.++++    ++|++++++|++++...+...            ..++
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~------------~~~~  145 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKS------------AGIK  145 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccc------------cccc
Confidence            9999999999999988 8899999999999999999999    999999999999886553211            0000


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHH----HHHHHHHHHHHhhcCccCCCHHHHHHHHH
Q 015813          247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGI----LASPAAGICLFFFEEFVLPSFYSFLLMLV  322 (400)
Q Consensus       247 ~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  322 (400)
                      + . .....|++++++++++|+.|.+..|+..  .+ +....+.+..    .+.++....   . ...+...+.+.....
T Consensus       146 ~-~-~~~~~Gi~~~l~sg~~y~~~~~~~~~~~--~~-~~~~~~~~~~g~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~  216 (290)
T TIGR00776       146 S-E-FNFKKGILLLLMSTIGYLVYVVVAKAFG--VD-GLSVLLPQAIGMVIGGIIFNLGH---I-LAKPLKKYAILLNIL  216 (290)
T ss_pred             c-c-cchhhHHHHHHHHHHHHHHHHHHHHHcC--CC-cceehhHHHHHHHHHHHHHHHHH---h-cccchHHHHHHHHHH
Confidence            0 0 1235799999999999999999999852  23 3333333332    222222211   0 012223333333344


Q ss_pred             HHHHHHHHHHHHHHHhc-ccCccchhhhHhhHHHHHHHHHHHHhcccCchhhh----hhhHHHHHHHHHHHHc
Q 015813          323 LSILAFFAEVLLARGLQ-LEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRL----VGCVLILVSVFYTMYI  390 (400)
Q Consensus       323 ~gv~~~~~~~~~~~al~-~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~----~G~~li~~g~~~~~~~  390 (400)
                      .|++..+++.+|..+.+ +.++++++++.+.+|+.+.+++++++||..++.++    +|+++++.|+.+....
T Consensus       217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            88888999999999999 99999999999999999999999999999999999    9999999999887653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=1.2e-21  Score=174.74  Aligned_cols=274  Identities=19%  Similarity=0.176  Sum_probs=225.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCC-----cCchhHHHHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPI-----FGPMHARNLLVLRALVG  163 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  163 (400)
                      ..+|+++.+.+.+.||......|.+  +..++.++...|.+.+.++++.+....+++.     .++++......+.+...
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            4469999999999999999999995  6899999999999999887766654333221     22334455666777888


Q ss_pred             HHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcc
Q 015813          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEA  243 (400)
Q Consensus       164 ~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~  243 (400)
                      ...+..|.+|.++-..-++++=.++.|++.++++.+++|||+++.|+++++++.+||........               
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g---------------  147 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG---------------  147 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC---------------
Confidence            88899999999999999999999999999999999999999999999999999999998775432               


Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCcc---C-CCHHHHHH
Q 015813          244 ISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFV---L-PSFYSFLL  319 (400)
Q Consensus       244 ~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~  319 (400)
                             +-.+    .++.=+++|++|..+-|+. +  .+.......-++...+...+.....++..   . .+...|..
T Consensus       148 -------~lpw----val~la~sf~~Ygl~RK~~-~--v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~L  213 (293)
T COG2962         148 -------SLPW----VALALALSFGLYGLLRKKL-K--VDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLL  213 (293)
T ss_pred             -------CCcH----HHHHHHHHHHHHHHHHHhc-C--CchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHH
Confidence                   1122    2345577899999887774 3  34556666666777777776666554333   1 35677888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          320 MLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       320 l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                      ++..|+++.++..++..+-|+.+-+..+.++|.+|..-.+++++++||+++..+++..++|-.|..+.....-+
T Consensus       214 Lv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~  287 (293)
T COG2962         214 LVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY  287 (293)
T ss_pred             HHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999988876543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.83  E-value=1.2e-17  Score=157.55  Aligned_cols=276  Identities=15%  Similarity=0.157  Sum_probs=220.0

Q ss_pred             HHHHHHhh-cCCCC--HHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Q 015813          107 QVISDVFM-VQSIP--LFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQAT  183 (400)
Q Consensus       107 ~~~~k~~~-~~~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~  183 (400)
                      .+....+. .+...  |..+++..+....+...+.....+.+ ..++..++.....++....+..+.+.+++++|...-.
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~   94 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-KSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQI   94 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence            34555443 23334  88899999998888777665555422 2233445666777899999999999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCchhHHHHHHHHHH
Q 015813          184 VLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFS  263 (400)
Q Consensus       184 ~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~a  263 (400)
                      ++....|+.+++++.+++|+|++++|++++++..+|+.+....+.....            +.+........|+++.+++
T Consensus        95 ~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~------------~~~~~~~~~~~G~~ll~~s  162 (303)
T PF08449_consen   95 VFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS------------SSNSSSFSSALGIILLLLS  162 (303)
T ss_pred             HHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc------------ccccccccchhHHHHHHHH
Confidence            9999999999999999999999999999999999999998877643211            1111111223499999999


Q ss_pred             HHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHHHHHHHHHHHh--hcCccC------CCHHHHHHHHHHHHHHHHHHHHH
Q 015813          264 SITGGISYCLIKAGAN-ASDQPLVTVFSFGILASPAAGICLFF--FEEFVL------PSFYSFLLMLVLSILAFFAEVLL  334 (400)
Q Consensus       264 a~~~a~~~v~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~l~~~gv~~~~~~~~~  334 (400)
                      .++.|+..++.++..+ ...++...+++....+.+...+....  .+++..      ..+..+..++...+++.+++.+.
T Consensus       163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i  242 (303)
T PF08449_consen  163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFI  242 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998664 44567788899999988888777766  333221      23456667777778888999999


Q ss_pred             HHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCccc
Q 015813          335 ARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKE  395 (400)
Q Consensus       335 ~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  395 (400)
                      ++..++.++...+++..+.-+++++++++++++++++.+++|.++++.|..+..+.++||+
T Consensus       243 ~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  243 FYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            9999999999999999999999999999999999999999999999999999998877764

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.80  E-value=1.1e-18  Score=159.69  Aligned_cols=234  Identities=17%  Similarity=0.190  Sum_probs=194.7

Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          147 FGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      +..++..+..+..+...+.+++.++.|+.+++++..+++..++-+|+.+++.++.+||+++.+++++++++.|++++...
T Consensus       153 ~t~~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~  232 (416)
T KOG2765|consen  153 LTATQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMG  232 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEec
Confidence            34456677778888899999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             ccccccccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHH--
Q 015813          227 ILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLF--  304 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  304 (400)
                      +..+              +++........|+++++++|+.||+|.++.||...+++.-..+-.+++.+|+.-+++..+  
T Consensus       233 ~s~~--------------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l  298 (416)
T KOG2765|consen  233 DSKQ--------------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPL  298 (416)
T ss_pred             cccc--------------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHH
Confidence            6432              222234567899999999999999999999986654433444445555555544444332  


Q ss_pred             ------hhcCccCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhh
Q 015813          305 ------FFEEFVLPSFYSFLLMLVLSILA-FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGC  377 (400)
Q Consensus       305 ------~~~~~~~~~~~~~~~l~~~gv~~-~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~  377 (400)
                            ..+.+..|+..+...++..++++ +++-++|.+|+-..++..++.-+.++...+++.+.++-+..+++.+++|.
T Consensus       299 ~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGs  378 (416)
T KOG2765|consen  299 IILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGS  378 (416)
T ss_pred             HHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHH
Confidence                  12456677888888888888776 99999999999999999999999999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHcCCcc
Q 015813          378 VLILVSVFYTMYIGPEK  394 (400)
Q Consensus       378 ~li~~g~~~~~~~~~~~  394 (400)
                      ..|+.|.+.++...+..
T Consensus       379 i~Ifv~Fv~vn~~~~~~  395 (416)
T KOG2765|consen  379 IPIFVGFVIVNISSENS  395 (416)
T ss_pred             HHHHHHHhheecccccc
Confidence            99999999998876543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.67  E-value=8.5e-16  Score=119.89  Aligned_cols=133  Identities=19%  Similarity=0.254  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcC---chhHHHHHHHHHHHHHHHH
Q 015813           91 SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFG---PMHARNLLVLRALVGFLSL  167 (400)
Q Consensus        91 ~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  167 (400)
                      ...++++++++++++..++.|.-. +++||...++.|.....+++..++...++....   .++.+..+.+.|+....++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHH
Confidence            357899999999999999999976 899999999999999999999998888876554   5677788999999999999


Q ss_pred             HHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      .+||+|++.-.++.+.++..++|+++.+++++++|||++..+++|++++.+|++++.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999999999999998875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.61  E-value=3.5e-15  Score=138.28  Aligned_cols=279  Identities=12%  Similarity=0.041  Sum_probs=215.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHHhhCCCC--cCchhHHHHHHHHHHHHHHHHHHHH
Q 015813           96 MALSSTIYFFMQVISDVFMV--QSIPLFETVFMRCTVTLILSYLWLRRSGQPI--FGPMHARNLLVLRALVGFLSLFSFV  171 (400)
Q Consensus        96 ~l~a~~~~~~~~~~~k~~~~--~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  171 (400)
                      .....++-...+...|.+..  .---|..++..+...+.+........+..+.  ...+..++.++..++..+++..+-+
T Consensus        22 ~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n  101 (316)
T KOG1441|consen   22 FAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGN  101 (316)
T ss_pred             HHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcc
Confidence            34444444455566777763  3334666666766666665554433332222  1234567778888999999999999


Q ss_pred             HHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCc
Q 015813          172 YSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGS  251 (400)
Q Consensus       172 ~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (400)
                      .+++++|++-...+-.++|++++++++++.+|+.++..++.++....||.+....+.                      +
T Consensus       102 ~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~----------------------~  159 (316)
T KOG1441|consen  102 VSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL----------------------S  159 (316)
T ss_pred             hhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc----------------------c
Confidence            999999999999999999999999999999999999999999999999999887543                      3


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCChHHHHHHHHHHHHHHHH-HHHHhhcCcc-------CCCHHHHHHH
Q 015813          252 DHMLAVLVGLFSSITGGISYCLIKAGAN---ASDQPLVTVFSFGILASPAAG-ICLFFFEEFV-------LPSFYSFLLM  320 (400)
Q Consensus       252 ~~~~G~l~~l~aa~~~a~~~v~~k~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~l  320 (400)
                      .++.|...++.+.++.+..+++.|+..+   ..-++.....+..-.+...++ +.....+...       ..+.. ...+
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~  238 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLIL  238 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHH
Confidence            4779999999999999999999999774   235677777787777777666 3333322211       12223 3333


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCccccc
Q 015813          321 LVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEMN  397 (400)
Q Consensus       321 ~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~~  397 (400)
                      +...++...-+...+..+.+.+|...+..+.+.-++.++.++++++++.++.+.+|.++.+.|+.++.+.+.+++++
T Consensus       239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            44447778888889999999999999999999999999999999999999999999999999999999887776654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.61  E-value=6.6e-15  Score=114.94  Aligned_cols=133  Identities=20%  Similarity=0.236  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCC---CHHHHHHHHHHHHHHHHHHH
Q 015813          256 AVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLP---SFYSFLLMLVLSILAFFAEV  332 (400)
Q Consensus       256 G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gv~~~~~~~  332 (400)
                      ..++++++++.+++..++.|-..++.| +..-.+...+....++....+..++++.+   +++.|.+++..|+.++++.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            578999999999999999998776555 44444556667777777777778888876   89999999999988899999


Q ss_pred             HHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHH
Q 015813          333 LLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       333 ~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~  389 (400)
                      +|++|++..+++++..+.-+.|++++++++++++|+++..+++|+++|++|.+++.+
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999877643

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.55  E-value=4.8e-12  Score=113.63  Aligned_cols=261  Identities=11%  Similarity=0.072  Sum_probs=210.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHH
Q 015813          119 PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAAR  198 (400)
Q Consensus       119 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~  198 (400)
                      ++..+.+..-+.+.++-..++...+.. ...++.++.....++...++..|.+.|++|++--.-.+--.+--+-+++.+.
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~  128 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGT  128 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc-CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHH
Confidence            567777888788877776666555444 3334455666677889999999999999999999998888888888899999


Q ss_pred             HHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015813          199 IILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGA  278 (400)
Q Consensus       199 ~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~  278 (400)
                      ++.|.|+++.+.+..+++-.|+.+....+..+             +..+........|+++....-..-++.+..+.++.
T Consensus       129 Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~-------------s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf  195 (327)
T KOG1581|consen  129 LVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD-------------SSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLF  195 (327)
T ss_pred             HHhcCccCcHHHHHHHHHHhheeeEEEecCCC-------------CccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHh
Confidence            99999999999999999999998776543221             11111223578999999999999999999888866


Q ss_pred             c-CCCChHHHHHHHHHHHHHHHHHHHHhhcCccC------CCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHh
Q 015813          279 N-ASDQPLVTVFSFGILASPAAGICLFFFEEFVL------PSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQY  351 (400)
Q Consensus       279 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~  351 (400)
                      + ........+++..+...+.........+++..      ..+..+.-++.+..++.++|.+.++-+++.|+-..+.++.
T Consensus       196 ~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~t  275 (327)
T KOG1581|consen  196 KKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMT  275 (327)
T ss_pred             ccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHH
Confidence            5 34567788888888888877776554444432      2567788888999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          352 IEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       352 ~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                      +.-+++++++.+.++.++++.|++|..+++.|+.+-.+.+.+
T Consensus       276 tRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  276 TRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999998886655443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.55  E-value=2.1e-13  Score=117.50  Aligned_cols=283  Identities=13%  Similarity=0.126  Sum_probs=211.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCC-----------HHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHH
Q 015813           95 CMALSSTIYFFMQVISDVFMVQSIP-----------LFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVG  163 (400)
Q Consensus        95 l~l~a~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (400)
                      +...-.+|+-.+.+....+....+.           .+.++|..+....++.=.++..+++ ...++..-+....++...
T Consensus        17 ca~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~-~~~D~t~~~~YaAcs~sY   95 (337)
T KOG1580|consen   17 CAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKK-TEIDNTPTKMYAACSASY   95 (337)
T ss_pred             EecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccc-ccccCCcchHHHHHHHHH
Confidence            3444445666666676665422222           4556666666666555333333322 222333345667778888


Q ss_pred             HHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcc
Q 015813          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEA  243 (400)
Q Consensus       164 ~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~  243 (400)
                      .+++..-+.|++++|-....+-.+.-|+=+++++.++.+++.+|++...++++++||++..+.+..-.+           
T Consensus        96 LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g-----------  164 (337)
T KOG1580|consen   96 LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGG-----------  164 (337)
T ss_pred             HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCC-----------
Confidence            899999999999999999999999999999999999999999999999999999999999887532211           


Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccC-CCChHHHHHHHHHHHHHHHHHHHHhhc-CccC-----CCHHH
Q 015813          244 ISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANA-SDQPLVTVFSFGILASPAAGICLFFFE-EFVL-----PSFYS  316 (400)
Q Consensus       244 ~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~  316 (400)
                          ........|.++.+++-.+-++....+.+..+. .......+++..+-+.+.+...+.+.+ -|..     -.+..
T Consensus       165 ----~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~  240 (337)
T KOG1580|consen  165 ----AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYV  240 (337)
T ss_pred             ----CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHH
Confidence                122345689999999999998888877765542 233455667777777776666555443 2322     13456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          317 FLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       317 ~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                      |.-+..+++++.+++++.+.-+...+|-.-+++....-+|+++.++++++.+++..||+|.++++.+...-....++
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            66677888889999999999999999999999999999999999999999999999999999999988777666553

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.54  E-value=1.3e-12  Score=118.56  Aligned_cols=226  Identities=15%  Similarity=0.146  Sum_probs=166.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcccc
Q 015813          149 PMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~  228 (400)
                      .++....+.+-++...+.+.+.++++++++++.-.++.++-.+++++++++++|+|++++||+++++.++|+.++-.++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34445666777888999999999999999999999999999999999999999999999999999999999999876654


Q ss_pred             ccccccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCC-ChHHHHHHHHHHHHHHHHHHHHhhc
Q 015813          229 TTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASD-QPLVTVFSFGILASPAAGICLFFFE  307 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  307 (400)
                      .....     ++++..+.+........|.++.++++++.|+..++..+..|+.+ +.+.......+.+.++.++..... 
T Consensus        93 ~~~~~-----~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~-  166 (244)
T PF04142_consen   93 QSSDN-----SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLS-  166 (244)
T ss_pred             ccccc-----ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            32110     00001111112345679999999999999999999999888653 344445555666666655554332 


Q ss_pred             CccCC----CHHHHHHHHHHHHH-HHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHH
Q 015813          308 EFVLP----SFYSFLLMLVLSIL-AFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLI  380 (400)
Q Consensus       308 ~~~~~----~~~~~~~l~~~gv~-~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li  380 (400)
                      ++...    -...|-...+.-++ ..++=++....+|+.+...=+.......+++.+.++++++.+++....+|+.+|
T Consensus       167 ~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  167 DGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            22211    11222222222222 355566667778999998889999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.53  E-value=4.1e-15  Score=129.49  Aligned_cols=278  Identities=12%  Similarity=0.103  Sum_probs=204.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHH
Q 015813           91 SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSF  170 (400)
Q Consensus        91 ~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (400)
                      .|.++-++.+..-....-..|.  .-+.|..|......+.+.+.-....+|+ +.  . +..|+..++.++...-++++.
T Consensus        22 LGQiLSL~~t~~a~tss~la~k--~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~--~-~~~~~hYilla~~DVEaNy~v   95 (336)
T KOG2766|consen   22 LGQILSLLITSTAFTSSELARK--GINAPTSQTFLNYVLLALVYGPIMLFRR-KY--I-KAKWRHYILLAFVDVEANYFV   95 (336)
T ss_pred             HHHHHHHHHHcchhhhHHHHhc--cCCCccHHHHHHHHHHHHHHhhHHHhhh-HH--H-HHHHHHhhheeEEeecccEEE
Confidence            4666666666555555555554  2356666665555555544443333443 21  1 222344777788889999999


Q ss_pred             HHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCC
Q 015813          171 VYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRG  250 (400)
Q Consensus       171 ~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (400)
                      ..|.||++...+.++.......+.+++|+++|-|.++.++.|+++|+.|++.+...|...              .+...+
T Consensus        96 V~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a--------------gd~agg  161 (336)
T KOG2766|consen   96 VKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA--------------GDRAGG  161 (336)
T ss_pred             eeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc--------------ccccCC
Confidence            999999999999999999999999999999999999999999999999999998776442              122234


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCC-HHHHHHHHH--HHHHH
Q 015813          251 SDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPS-FYSFLLMLV--LSILA  327 (400)
Q Consensus       251 ~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~--~gv~~  327 (400)
                      ++..+|+.+.+.+|.+||+.++.-..+.|+ .+....+....+.+.++..+- +..+..+..+ .++|....+  ..++.
T Consensus       162 snp~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~M  239 (336)
T KOG2766|consen  162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALTM  239 (336)
T ss_pred             CCCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHHH
Confidence            567789999999999999999988887764 445566677778888777766 3333333211 111322222  33334


Q ss_pred             HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          328 FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       328 ~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      ++-|.+....+|..+++..++-..+.-.++.++  ..||.+.+|..++....+..|.++...|.+
T Consensus       240 FllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~  302 (336)
T KOG2766|consen  240 FLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREK  302 (336)
T ss_pred             HHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecccc
Confidence            888999999999999999999999999999998  677888999999999999999887755443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.52  E-value=1.2e-13  Score=112.47  Aligned_cols=122  Identities=23%  Similarity=0.352  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCC---CCcCchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015813          101 TIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQ---PIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL  177 (400)
Q Consensus       101 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  177 (400)
                      ++|+.+.+..|... ++.||.+..++|+..+.+ ++++....++   +...+++.....+.+.+....++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            46999999999987 779999999999999996 4444332222   233334444455555555789999999999999


Q ss_pred             chhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       178 ~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      +++.++++.++.|+++.+++++++||++++++++|+++++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.51  E-value=1.3e-11  Score=112.25  Aligned_cols=282  Identities=13%  Similarity=0.104  Sum_probs=214.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHH--HHHHHHHHHHHHHHHHhhCC-C-CcCchhHHHHHHHHHHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETV--FMRCTVTLILSYLWLRRSGQ-P-IFGPMHARNLLVLRALVGFLSL  167 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~--~~r~~~~~l~l~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~  167 (400)
                      .+..++.-+++--.+.+..|.+....--|..+.  .++.+...+.+... .+.+- + ....++..+.++...+......
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~l-k~~~lv~~~~l~~~~~kk~~P~~~lf~~~i   91 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVL-KRLGLVNFRPLDLRTAKKWFPVSLLFVGML   91 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHhceeecCCcChHHHHHHccHHHHHHHHH
Confidence            345555556666667778888763332333333  36666666555443 33221 1 1223455566666677777777


Q ss_pred             HHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccc
Q 015813          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLN  247 (400)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~  247 (400)
                      ..-..+++++++...+++-+..|+++++....++|.|+++..+..+....+|......++...                 
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf-----------------  154 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF-----------------  154 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee-----------------
Confidence            777899999999999999999999999999999999999999999999999998887776443                 


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHhhccC-CCChHHHHHHHHHHHHHHHHHHHHhhcCcc--------CCCHHHHH
Q 015813          248 VRGSDHMLAVLVGLFSSITGGISYCLIKAGANA-SDQPLVTVFSFGILASPAAGICLFFFEEFV--------LPSFYSFL  318 (400)
Q Consensus       248 ~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  318 (400)
                           +..|+.+++...+.-+.+.+..|+..+. .-.....++|..+.+++.+.+..+.++++.        ..+...|.
T Consensus       155 -----~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~  229 (314)
T KOG1444|consen  155 -----NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLV  229 (314)
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHH
Confidence                 3359999999999999999999986642 223445778888999988888887777654        23455677


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcccc
Q 015813          319 LMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEM  396 (400)
Q Consensus       319 ~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  396 (400)
                      .+...|++++.-.++-.+..+..+++..++++...-..+.+-+.++.+++.++..++|..+-++|.++..+.+.++++
T Consensus       230 ~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~  307 (314)
T KOG1444|consen  230 VMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK  307 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence            888888999666667778889999999999998788888888888888999999999999999999999887755544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.50  E-value=6.3e-11  Score=109.40  Aligned_cols=286  Identities=13%  Similarity=0.118  Sum_probs=206.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHHhhCCC----Cc--------CchhHHHHHH
Q 015813           93 LMCMALSSTIYFFMQVISDVFMVQS---IPLFETVFMRCTVTLILSYLWLRRSGQP----IF--------GPMHARNLLV  157 (400)
Q Consensus        93 ~ll~l~a~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~--------~~~~~~~~~~  157 (400)
                      ++.++...+-++......|.....+   +.|....++--.+-.+++.....+..++    ..        ..++....+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            4566667777888888888765333   6788888888888777776666554211    10        1122234455


Q ss_pred             HHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCC
Q 015813          158 LRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGL  237 (400)
Q Consensus       158 ~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  237 (400)
                      +-++..++.+.++|.++.+.+++...+..++-.+.|.++..+++++|++++||.++++-++|+.++-.+....       
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~-------  169 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP-------  169 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC-------
Confidence            5677888888899999999999999999999999999999999999999999999999999999987443211       


Q ss_pred             cCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCC-CChHHHHHHHHHHHHHHHHHHHHhhcCcc------
Q 015813          238 VKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANAS-DQPLVTVFSFGILASPAAGICLFFFEEFV------  310 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  310 (400)
                         .+. .........+.|....+.++...++..++..+..|+. .+.+.........+.++.++........+      
T Consensus       170 ---~~a-~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gf  245 (345)
T KOG2234|consen  170 ---TGA-KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGF  245 (345)
T ss_pred             ---CCc-cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCc
Confidence               011 1122335678999999999999999999999988754 34444455555666666555554332111      


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHH
Q 015813          311 --LPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTM  388 (400)
Q Consensus       311 --~~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~  388 (400)
                        ..+...|..++..    +++-++....+|+.+-..=+....+..+++.+.++.+++-+++....+|+.+|+.++.+..
T Consensus       246 f~G~s~~vw~vVl~~----a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~  321 (345)
T KOG2234|consen  246 FYGYSSIVWLVVLLN----AVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS  321 (345)
T ss_pred             cccccHHHHHHHHHH----hccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence              1233334333333    4444455555677777777777788899999999999999999999999999999999988


Q ss_pred             HcCCc
Q 015813          389 YIGPE  393 (400)
Q Consensus       389 ~~~~~  393 (400)
                      ..+.+
T Consensus       322 ~~P~~  326 (345)
T KOG2234|consen  322 LYPAR  326 (345)
T ss_pred             cCCcc
Confidence            55543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.46  E-value=4.2e-11  Score=108.38  Aligned_cols=249  Identities=13%  Similarity=0.056  Sum_probs=176.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH-hhHHHHHHHHH
Q 015813          119 PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLS-FTAPIMASIAA  197 (400)
Q Consensus       119 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~-~~~P~~~~ll~  197 (400)
                      +|.+-.+--.+-+.++-+.....+++......+.+...+++|++..+++.+++.++++.+.+++.++. ...-+.+.+++
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            34444444344444444444444443322224667788999999999999999999999999999995 57777789999


Q ss_pred             HHHhcCcCcHHHH----HHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHH
Q 015813          198 RIILREKLKIAEI----GGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCL  273 (400)
Q Consensus       198 ~~~l~e~~~~~~~----~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~  273 (400)
                      .++++|+.+..++    +++++.++|+++....+.....              .....+...|.+..+++.+.|..|.++
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~--------------~~~~~~~~kgi~~Ll~stigy~~Y~~~  156 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK--------------SSSKSNMKKGILALLISTIGYWIYSVI  156 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc--------------cccccchhhHHHHHHHHHHHHHHHHHH
Confidence            9999999887764    4888889999988876643211              011234567999999999999999999


Q ss_pred             HHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhH
Q 015813          274 IKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIE  353 (400)
Q Consensus       274 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~  353 (400)
                      .|..   +.++....+-+++...+...++.... .....+...| .-...|++-.++..++..+.++.+.+..=.+..+.
T Consensus       157 ~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~~k~~~-~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~  231 (269)
T PF06800_consen  157 PKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFFEKKSW-KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLG  231 (269)
T ss_pred             HHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-cccccccchH-HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHH
Confidence            8873   23455555555555444444443322 1111222233 22455666688999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCchh----hhhhhHHHHHHHHH
Q 015813          354 VALTQLWGMGLSRIAPSFG----RLVGCVLILVSVFY  386 (400)
Q Consensus       354 pv~a~i~~~l~l~e~~~~~----~~~G~~li~~g~~~  386 (400)
                      ++++.+.|.+++||+=+..    .++|.++++.|.++
T Consensus       232 vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  232 VVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999999999999986644    46788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.45  E-value=1.9e-12  Score=119.55  Aligned_cols=179  Identities=17%  Similarity=0.120  Sum_probs=135.9

Q ss_pred             ccccccccCCCCcccccccccCCCCCcccccccccccchhhhhhc----cCcchHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015813           41 EISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVW----NGSRYSGLMCMALSSTIYFFMQVISDVFMVQ  116 (400)
Q Consensus        41 ~~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~  116 (400)
                      .++.+..+..|..+...+.-..|||.+.++..+......++..+.    ......|++++++++++|+.+.+..|... +
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~-~  152 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV-K  152 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh-h
Confidence            344455555566555566666678777777555555555555332    13346799999999999999999999986 5


Q ss_pred             CCCH--HHHHHHHHHHHHHHHHHHHHhhCCCCcCch-hHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHH
Q 015813          117 SIPL--FETVFMRCTVTLILSYLWLRRSGQPIFGPM-HARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMA  193 (400)
Q Consensus       117 ~~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~  193 (400)
                      +.++  .....+++.++.+++.++....++...... .+....+.+.+...+++.+|++++++.+++.++.+.++.|+++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~  232 (260)
T TIGR00950       153 KEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVA  232 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            6664  455557888888888877665544332233 3334555666677899999999999999999999999999999


Q ss_pred             HHHHHHHhcCcCcHHHHHHHHHHHHhh
Q 015813          194 SIAARIILREKLKIAEIGGLALSFFGV  220 (400)
Q Consensus       194 ~ll~~~~l~e~~~~~~~~g~~l~~~Gv  220 (400)
                      .+++++++||++++.+++|..+.+.|+
T Consensus       233 ~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       233 LLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999986

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.35  E-value=1.3e-11  Score=116.14  Aligned_cols=179  Identities=16%  Similarity=0.152  Sum_probs=124.9

Q ss_pred             ccccCCCCcccccccccCCCCCcccccccccccchhhhhhccC--------------cchHHHHHHHHHHHHHHHHHHHH
Q 015813           45 LLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNG--------------SRYSGLMCMALSSTIYFFMQVIS  110 (400)
Q Consensus        45 l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~G~ll~l~a~~~~~~~~~~~  110 (400)
                      +.....|.....++.-..|||++.++..+......++..+...              +...|++++++++++|+.+.+..
T Consensus        96 ~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~  175 (295)
T PRK11689         96 MVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVT  175 (295)
T ss_pred             HHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444455555567777777765555555555533211              12359999999999999999999


Q ss_pred             HHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCC-CcCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhH
Q 015813          111 DVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQP-IFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTA  189 (400)
Q Consensus       111 k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~  189 (400)
                      |... ++.++....+   ....+++.+.....+.. .....+.+..++..++...+++.+|++++++.+++.++.+.++.
T Consensus       176 k~~~-~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~  251 (295)
T PRK11689        176 RKYA-RGKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFT  251 (295)
T ss_pred             hhcc-CCCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhH
Confidence            9975 6677765432   22223332222222221 11222334444455577788999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          190 PIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       190 P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      |++..+++++++||++++.+++|.++++.|+++....+
T Consensus       252 Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        252 PVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            99999999999999999999999999999998876543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.33  E-value=1.7e-11  Score=117.66  Aligned_cols=191  Identities=10%  Similarity=0.117  Sum_probs=132.7

Q ss_pred             CCCccccccccccCCCCccccccccc------CCCCCcccccccccccchhhhhhc--cC--------------------
Q 015813           36 GTASDEISPLLAQSEKPKTNIFSVSY------TRRKPREHVIETDTSLTNCMLWVW--NG--------------------   87 (400)
Q Consensus        36 ~~~~~~~~~l~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------------   87 (400)
                      ++++..+++++....|..+.+++...      .+|+.+.++..+......|+.++.  +.                    
T Consensus       100 ~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~  179 (358)
T PLN00411        100 EYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPP  179 (358)
T ss_pred             hhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccc
Confidence            45566677777777776666666544      366666666555555555544321  11                    


Q ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCH-HHHHHHHHHHHHHHHHHHHHh-hCCC--Cc-C--chhHHH
Q 015813           88 ------SRYSGLMCMALSSTIYFFMQVISDVFMVQSIPL-FETVFMRCTVTLILSYLWLRR-SGQP--IF-G--PMHARN  154 (400)
Q Consensus        88 ------~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~~~l~l~~~~~~-~~~~--~~-~--~~~~~~  154 (400)
                            +...|.+++++++++|+++.+..|... +++++ ....++...++.+.+.+.... .+..  .+ .  ......
T Consensus       180 ~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  258 (358)
T PLN00411        180 LSSSNSDWLIGGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLIT  258 (358)
T ss_pred             cCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHH
Confidence                  113488999999999999999999876 55544 455666666665544433322 2211  11 1  111122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcccc
Q 015813          155 LLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (400)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~  228 (400)
                       .+..++...+++.+|++++++.+++.++++.++.|++++++++++++|++++.+++|.++++.|+++...++.
T Consensus       259 -i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        259 -IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence             2223445567899999999999999999999999999999999999999999999999999999999886653

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.31  E-value=1.1e-11  Score=100.73  Aligned_cols=122  Identities=22%  Similarity=0.242  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCc--cCCCHHHHHHHHHHHHHH-HHHHHHHHHHhccc
Q 015813          265 ITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEF--VLPSFYSFLLMLVLSILA-FFAEVLLARGLQLE  341 (400)
Q Consensus       265 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gv~~-~~~~~~~~~al~~~  341 (400)
                      ++||.+.+..|+..++ .++....++....+.+ ..+........  ..++...+...++.++++ .+++.++++++++.
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4688999999998764 6677777787777776 44444444333  456778888888889885 99999999999999


Q ss_pred             CccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHH
Q 015813          342 KTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTM  388 (400)
Q Consensus       342 ~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~  388 (400)
                      ++++++.+.+++|+++.++++++++|++++.+++|+.+++.|+++..
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.27  E-value=2.8e-10  Score=107.03  Aligned_cols=136  Identities=12%  Similarity=-0.003  Sum_probs=108.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHH-HHHHHHHHHHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHAR-NLLVLRALVGFLSLF  168 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  168 (400)
                      ..|.++.++++++|+.+.+..|... ++.++....... .++.+++.++..............+ ..++++.++..+++.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~-~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~  224 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAG-AEHGPATVAIGS-LIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYS  224 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHHHH-HHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4699999999999999999999985 677887765444 4555555555544332211122222 235666777889999


Q ss_pred             HHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      +|++++++++++.++++.++.|+++.+++++++||++++.+++|.+++++|+++.....
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999886553

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.27  E-value=2.6e-10  Score=107.23  Aligned_cols=181  Identities=14%  Similarity=0.080  Sum_probs=133.2

Q ss_pred             ccccccCCCCcccccccccCCCCCcccccccccccchhhhhh-ccC---cchHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 015813           43 SPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWV-WNG---SRYSGLMCMALSSTIYFFMQVISDVFMVQSI  118 (400)
Q Consensus        43 ~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~  118 (400)
                      +.+.....|....+++.- .+||.+.++..+......|+.++ +++   ....|.++.++++++|+.+.+..|... + -
T Consensus        99 a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~-~-~  175 (292)
T PRK11272         99 AAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLP-L-P  175 (292)
T ss_pred             HHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcC-C-C
Confidence            344444455555555543 47777777755555555555543 221   234699999999999999999999864 3 3


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhCCCC--c-CchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHH
Q 015813          119 PLFETVFMRCTVTLILSYLWLRRSGQPI--F-GPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASI  195 (400)
Q Consensus       119 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~l  195 (400)
                      ++....++...++.+.+.++........  . ....+....+.+.+...+++.+|++++++.++++++.+.++.|+++++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i  255 (292)
T PRK11272        176 VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL  255 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence            4455667788887777766655433221  1 123344555666667789999999999999999999999999999999


Q ss_pred             HHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          196 AARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       196 l~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      ++++++||++++.+++|.++++.|+++....
T Consensus       256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.27  E-value=2.8e-11  Score=101.81  Aligned_cols=211  Identities=11%  Similarity=0.061  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCC
Q 015813          161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKP  240 (400)
Q Consensus       161 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  240 (400)
                      +.....++.|..|++++++++++.+..+.--|+.+++++.+|+|+...++++..+++.|++.+.+.+...          
T Consensus        61 i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~----------  130 (290)
T KOG4314|consen   61 IFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH----------  130 (290)
T ss_pred             EEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh----------
Confidence            3445678899999999999999999999999999999999999999999999999999999998765322          


Q ss_pred             CcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHH------HHHHHh--hcCccCC
Q 015813          241 GEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAA------GICLFF--FEEFVLP  312 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~  312 (400)
                                ...+.|+.+++.++.+.|+|-++-|+... ..+......++...+..-+      .+++..  .++|+..
T Consensus       131 ----------a~e~iGi~~AV~SA~~aAlYKV~FK~~iG-nAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF  199 (290)
T KOG4314|consen  131 ----------ADEIIGIACAVGSAFMAALYKVLFKMFIG-NANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF  199 (290)
T ss_pred             ----------hhhhhhHHHHHHHHHHHHHHHHHHHHHhc-cCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH
Confidence                      35789999999999999999999998763 2222222222222222111      111111  2345544


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          313 SFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       313 ~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      ....|+.+...+.+...-..+.+.++....|-..++-+.....-...++.++-+-..+...+.|..+|.+|.++......
T Consensus       200 A~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d  279 (290)
T KOG4314|consen  200 AAAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPED  279 (290)
T ss_pred             hhCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccc
Confidence            55668888888877777788889999999999999998888888889998876667888999999999999887765543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.26  E-value=9.3e-11  Score=93.87  Aligned_cols=104  Identities=19%  Similarity=0.285  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCc----CchhHHHHHHHHHHHH-HHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHH
Q 015813          125 FMRCTVTLILSYLWLRRSGQPIF----GPMHARNLLVLRALVG-FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARI  199 (400)
Q Consensus       125 ~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~  199 (400)
                      .+|+..+.+++..+...+++...    .+++.+.+.+..++.. ..++.++++|+++.| +.++++.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            57889888888776665443211    1123334445545555 488999999999999 58889999999999999999


Q ss_pred             HhcCcCcHHHHHHHHHHHHhhhhhhccccc
Q 015813          200 ILREKLKIAEIGGLALSFFGVLFIFRRILT  229 (400)
Q Consensus       200 ~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~  229 (400)
                      ++|||++++++++++++++|++++..++..
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999988754

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.25  E-value=8.8e-10  Score=103.08  Aligned_cols=275  Identities=19%  Similarity=0.135  Sum_probs=161.0

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHH-HHHHHHHHHHHH
Q 015813           87 GSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHAR-NLLVLRALVGFL  165 (400)
Q Consensus        87 ~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  165 (400)
                      .+...|.++++.++++.+....+.|... .+.+.   .-                .++.....+... +.++.+.+...+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~-~r~~~---~~----------------~~~~~~~~~~l~~~~W~~G~~~~~~   62 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSH-LRLPR---GS----------------LRAGSGGRSYLRRPLWWIGLLLMVL   62 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhc---cc----------------ccccchhhHHHhhHHHHHHHHHHhc
Confidence            4456799999999999999999998753 11100   00                000000011111 223333445567


Q ss_pred             HHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccc
Q 015813          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAIS  245 (400)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~  245 (400)
                      +..+.+.|+...|.+..+++..+.-++..+++.+++|||++++++.|.++++.|..++.........         ..+.
T Consensus        63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~---------~~t~  133 (300)
T PF05653_consen   63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEP---------IHTL  133 (300)
T ss_pred             chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCC---------cCCH
Confidence            7788899999999999999999999999999999999999999999999999999876543211100         0000


Q ss_pred             ccc---CCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHH-------HHHHH-HHhhcCccCCCH
Q 015813          246 LNV---RGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASP-------AAGIC-LFFFEEFVLPSF  314 (400)
Q Consensus       246 ~~~---~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~  314 (400)
                      ++.   .......... .+...+...+.....+|..+++.  ........+.+..       +.... ....++.+...+
T Consensus       134 ~~l~~~~~~~~fl~y~-~~~~~~~~~L~~~~~~r~g~~~i--~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~  210 (300)
T PF05653_consen  134 DELIALLSQPGFLVYF-ILVLVLILILIFFIKPRYGRRNI--LVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYP  210 (300)
T ss_pred             HHHHHHhcCcceehhH-HHHHHHHHHHHHhhcchhcccce--EEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhh
Confidence            100   0000011111 11112222222222223222111  1000000111110       00011 111122223356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHh-hHHHHHHHHHHHHhccc--Cch----hhhhhhHHHHHHHHHH
Q 015813          315 YSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQY-IEVALTQLWGMGLSRIA--PSF----GRLVGCVLILVSVFYT  387 (400)
Q Consensus       315 ~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~-~~pv~a~i~~~l~l~e~--~~~----~~~~G~~li~~g~~~~  387 (400)
                      ..|..++.+.++...-..+.|+|+++.+++.+.++.+ .-..++++-|.++++|.  .++    ....|+.+++.|+.++
T Consensus       211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL  290 (300)
T PF05653_consen  211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL  290 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence            6676666655555777788899999999999998888 56777888888888984  444    3477888899998888


Q ss_pred             HHcCCc
Q 015813          388 MYIGPE  393 (400)
Q Consensus       388 ~~~~~~  393 (400)
                      ..+++.
T Consensus       291 ~~~~~~  296 (300)
T PF05653_consen  291 SSSKDK  296 (300)
T ss_pred             eccCch
Confidence            665443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.24  E-value=2.4e-08  Score=94.17  Aligned_cols=291  Identities=10%  Similarity=0.009  Sum_probs=182.7

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHHHHHHHHHHHhhC-CC-----CcCchhHHHHHHHH
Q 015813           87 GSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFM-RCTVTLILSYLWLRRSG-QP-----IFGPMHARNLLVLR  159 (400)
Q Consensus        87 ~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~l~l~~~~~~~~-~~-----~~~~~~~~~~~~~~  159 (400)
                      ++...|+++.+++++||+...+-.|+.  ++.+-... +. -.+++.++.....-... +.     .-.+.+.....++.
T Consensus         3 ~~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          3 NAIILGIIWHLIGGASSGSFYAPFKKV--KKWSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             chhHHHHHHHHHHHHHhhccccccccc--CCCchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            345679999999999999999999983  44442222 21 11122222211100000 00     00224556778889


Q ss_pred             HHHHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcC-------cHHHHHHHHHHHHhhhhhhccccccc
Q 015813          160 ALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKL-------KIAEIGGLALSFFGVLFIFRRILTTQ  231 (400)
Q Consensus       160 ~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~-------~~~~~~g~~l~~~Gv~l~~~~~~~~~  231 (400)
                      |+...+++..++.++++.+.+.+.++ ..+.-++..++..++++|..       ...-.+|++++++|+++........+
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999999888 57899999999999999865       23468899999999999887433221


Q ss_pred             cccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHH-------HHHHhhccCCCChHHHHHHHHH---HHHHHH-H
Q 015813          232 AVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISY-------CLIKAGANASDQPLVTVFSFGI---LASPAA-G  300 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~-------v~~k~~~~~~~~~~~~~~~~~~---~~~~~~-~  300 (400)
                      .         +...++.......+|+++++++.+.++.|+       ...+...+.+.++.....-+.+   .+..+. .
T Consensus       160 ~---------~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~  230 (345)
T PRK13499        160 R---------KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNL  230 (345)
T ss_pred             c---------ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence            1         111110122446689999999999999999       4433311112222222222222   222221 1


Q ss_pred             HHHHh---h-cCcc---CC--C----HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhh----hHhhHHHHHHHHHHH
Q 015813          301 ICLFF---F-EEFV---LP--S----FYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVAN----VQYIEVALTQLWGMG  363 (400)
Q Consensus       301 ~~~~~---~-~~~~---~~--~----~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~----~~~~~pv~a~i~~~l  363 (400)
                      +....   . .++.   ..  +    ......-...|++-.+++.++..+-++.+......    .+.+..+++.++|. 
T Consensus       231 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-  309 (345)
T PRK13499        231 GFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-  309 (345)
T ss_pred             HHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-
Confidence            11111   1 1111   11  1    22333334455555788888888888886654443    34788899999998 


Q ss_pred             HhcccCc------hhhhhhhHHHHHHHHHHHHc
Q 015813          364 LSRIAPS------FGRLVGCVLILVSVFYTMYI  390 (400)
Q Consensus       364 ~l~e~~~------~~~~~G~~li~~g~~~~~~~  390 (400)
                      +++|.=+      ..-++|+++++.|..++...
T Consensus       310 ~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        310 VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            5999755      45689999999999887664

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.21  E-value=2.4e-09  Score=96.44  Aligned_cols=247  Identities=15%  Similarity=0.107  Sum_probs=180.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhCCCC------cCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHH
Q 015813          119 PLFETVFMRCTVTLILSYLWLRRSGQPI------FGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIM  192 (400)
Q Consensus       119 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~  192 (400)
                      -|+.++.+..++-.++.....+.++.+.      ..+++..+.+...+++.++-..+-++++++++.+.-++..+..++|
T Consensus        44 fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   44 FPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHH
Confidence            4677777777766665554443332221      1223445666788888888899999999999999999999999999


Q ss_pred             HHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHH
Q 015813          193 ASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYC  272 (400)
Q Consensus       193 ~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v  272 (400)
                      +.+++.+|-=||++|.-..-++++.+|+++....+..                      -+..|..+.+.++.+.++-..
T Consensus       124 IllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq----------------------f~i~Gf~lv~~aS~~sGlRW~  181 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ----------------------FNIEGFFLVLAASLLSGLRWA  181 (349)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc----------------------eeehhHHHHHHHHHhhhhhHH
Confidence            9999999888999999999999999999998876532                      245788888888888888888


Q ss_pred             HHHhhccCCC----ChHHHHHHHHHHHHHHHHHHHHhhcCccC---------CCHH-HHHHHHHH---HHHHHHHHHHHH
Q 015813          273 LIKAGANASD----QPLVTVFSFGILASPAAGICLFFFEEFVL---------PSFY-SFLLMLVL---SILAFFAEVLLA  335 (400)
Q Consensus       273 ~~k~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~l~~~---gv~~~~~~~~~~  335 (400)
                      +.+++.++++    +|..++++..-...+.+++.....++...         .+.. .+..+..+   |.++++--..-+
T Consensus       182 ~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEf  261 (349)
T KOG1443|consen  182 FTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEF  261 (349)
T ss_pred             HHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7777665433    56666666555555554554444443321         1221 22222222   333334444455


Q ss_pred             HHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHH
Q 015813          336 RGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYT  387 (400)
Q Consensus       336 ~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~  387 (400)
                      ..+.+.+.-..++..-..-+.+.+++..+.+++++...++|..+...|+.+-
T Consensus       262 lLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  262 LLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             heeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            6678888899999999999999999999999999999999999999998887

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.17  E-value=8.6e-11  Score=109.82  Aligned_cols=181  Identities=12%  Similarity=0.044  Sum_probs=123.6

Q ss_pred             cccccccCCCCcccccccccCCCCCcccccccccccchhhhhhc-c---CcchHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 015813           42 ISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVW-N---GSRYSGLMCMALSSTIYFFMQVISDVFMVQS  117 (400)
Q Consensus        42 ~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~  117 (400)
                      +........+......+.-..+|+++.++.-+......++..+. .   .....|..++++++++|+.+.+..|... ++
T Consensus        91 ~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~-~~  169 (281)
T TIGR03340        91 LVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAA-LG  169 (281)
T ss_pred             hhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccc-cc
Confidence            33333444455454555555678777777666555555555331 1   1234688899999999999999988753 33


Q ss_pred             CCHH----HHHHHHHHHHHHHHHHHHHhhCCC-C-cCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHH
Q 015813          118 IPLF----ETVFMRCTVTLILSYLWLRRSGQP-I-FGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPI  191 (400)
Q Consensus       118 ~~~~----~~~~~r~~~~~l~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~  191 (400)
                      .++.    ....+......+.+.++....+.. . ....+.+...+..++...+++.+|++++++.+++.++.+.++.|+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv  249 (281)
T TIGR03340       170 VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIV  249 (281)
T ss_pred             hhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHH
Confidence            4432    223333333312222222222221 1 122344556777788888999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhh
Q 015813          192 MASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (400)
Q Consensus       192 ~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~  223 (400)
                      ++.+++++++||++++.+++|.+++++|++++
T Consensus       250 ~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       250 FAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            99999999999999999999999999999863

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.16  E-value=7.4e-10  Score=104.45  Aligned_cols=185  Identities=13%  Similarity=0.126  Sum_probs=130.6

Q ss_pred             cccccccCCCCcccccccccCCCCCcccccccccccchhhhhhc-c---C--cchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015813           42 ISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVW-N---G--SRYSGLMCMALSSTIYFFMQVISDVFMV  115 (400)
Q Consensus        42 ~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~--~~~~G~ll~l~a~~~~~~~~~~~k~~~~  115 (400)
                      ++....+.++..+.+++.-..||+++.++.-+......++..+. +   .  ....|++++++++++|+.+.+..|... 
T Consensus        88 ~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~-  166 (299)
T PRK11453         88 LASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIM-  166 (299)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence            33444455555555666666788887777666555555555332 1   1  123699999999999999999999864 


Q ss_pred             CCCC---HHHHHHHHHHHHHHHHHHHHH-hhCCC-------CcCchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Q 015813          116 QSIP---LFETVFMRCTVTLILSYLWLR-RSGQP-------IFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATV  184 (400)
Q Consensus       116 ~~~~---~~~~~~~r~~~~~l~l~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~  184 (400)
                      ++.+   .....++-..++.+.+..... ..+..       ......+....+++.+...+++.+|++++++.++++++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~  246 (299)
T PRK11453        167 SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAP  246 (299)
T ss_pred             cccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            3332   233334444444333322221 12111       122234555667777888899999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          185 LSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       185 l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      +..+.|++..+++++++||++++.+++|.+++++|+++...+.
T Consensus       247 ~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        247 LSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            9999999999999999999999999999999999999887654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.15  E-value=2.8e-09  Score=91.59  Aligned_cols=283  Identities=11%  Similarity=0.056  Sum_probs=200.9

Q ss_pred             HHHHHHHHHHHHHHHHHhh-cCCCC-HHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 015813           96 MALSSTIYFFMQVISDVFM-VQSIP-LFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYS  173 (400)
Q Consensus        96 ~l~a~~~~~~~~~~~k~~~-~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  173 (400)
                      .+.-+..--++.+..|.+. ..+.+ -+.+++.+.+...+-+..+-..+-.+.+  ....+.++.-.+......+.--.+
T Consensus        11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR--~t~aK~WfpiSfLLv~MIyt~SKs   88 (309)
T COG5070          11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR--LTKAKKWFPISFLLVVMIYTSSKS   88 (309)
T ss_pred             HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee--hhhhhhhcCHHHHHHHHHHhcccc
Confidence            3333444445566667654 12222 3455666666655544443222111111  111222233344444445555689


Q ss_pred             HhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCchh
Q 015813          174 IQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDH  253 (400)
Q Consensus       174 l~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (400)
                      ++|.++..-+++.++..+.++.....++|.|.+-.+.....+.+..-+.-.++|.....               .....-
T Consensus        89 LqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~---------------~~~~~l  153 (309)
T COG5070          89 LQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASA---------------FKAQIL  153 (309)
T ss_pred             eeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHH---------------HHhccc
Confidence            99999999999999999999999999999999999999999888888777766532110               000112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccC-CCChHHHHHHHHHHHHHHHHHHHHhhcCccCC------CHHHHHHHHHHHHH
Q 015813          254 MLAVLVGLFSSITGGISYCLIKAGANA-SDQPLVTVFSFGILASPAAGICLFFFEEFVLP------SFYSFLLMLVLSIL  326 (400)
Q Consensus       254 ~~G~l~~l~aa~~~a~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gv~  326 (400)
                      -.|++++...++.-+.+....|+..|. .-....+++|..+.+.+++..+.+..++|.+-      +.....+++..|++
T Consensus       154 N~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~  233 (309)
T COG5070         154 NPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC  233 (309)
T ss_pred             CCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH
Confidence            258888888899999888888875542 12345789999999999999999999988754      34456678888998


Q ss_pred             HHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCccc
Q 015813          327 AFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKE  395 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  395 (400)
                      ++.--++-.|.++-.+.+..+++..++-.-..+.|.++++|+.+...+..+.+-..+.++....+.+|+
T Consensus       234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            855556778899999999999999999999999999999999999999999988888777776655443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.11  E-value=3e-10  Score=107.29  Aligned_cols=190  Identities=11%  Similarity=0.085  Sum_probs=135.9

Q ss_pred             CCccccccccccCCCCcccccccccCCCCCcccccccccccchhhhhhcc---CcchHHHHHHHHHHHHHHHHHHHHHHh
Q 015813           37 TASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWN---GSRYSGLMCMALSSTIYFFMQVISDVF  113 (400)
Q Consensus        37 ~~~~~~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~ll~l~a~~~~~~~~~~~k~~  113 (400)
                      +++..+..+.....|..+.+++.-..+|+.+.++.........|+...-.   .....|.+++++++++|+.+.+..|..
T Consensus        88 ~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~  167 (302)
T TIGR00817        88 KVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKA  167 (302)
T ss_pred             hccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34445555666666666666666666777766665554445555543211   223569999999999999999999987


Q ss_pred             hcC--CCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCch---------h---HHHHHHHHHH-HHHHHHHHHHHHHhccc
Q 015813          114 MVQ--SIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPM---------H---ARNLLVLRAL-VGFLSLFSFVYSIQRLP  178 (400)
Q Consensus       114 ~~~--~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~---~~~~~~~~~~-~~~~~~~~~~~al~~~~  178 (400)
                      . +  ++++..+.++...++.++++++............         .   .+...+..+. +....+.++++++++++
T Consensus       168 ~-~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s  246 (302)
T TIGR00817       168 M-TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVS  246 (302)
T ss_pred             h-ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            6 5  7999999999999998888877654332111100         0   0111112222 23334456678999999


Q ss_pred             hhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       179 ~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      +..++++..+.|+++.+++++++||+++..+++|.++++.|+++....+
T Consensus       247 a~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       247 PLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             chHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999877544

specificities overlap.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.09  E-value=1.8e-10  Score=101.80  Aligned_cols=255  Identities=13%  Similarity=0.087  Sum_probs=194.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhCCC----Cc----CchhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHH
Q 015813          119 PLFETVFMRCTVTLILSYLWLRRSGQP----IF----GPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAP  190 (400)
Q Consensus       119 ~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P  190 (400)
                      .|..+.++.++....+...+-+...+-    ..    .+-+..+..+-..+.......+-++++++++++--.+-..+.-
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhh
Confidence            578888888888877776654422211    01    1112233444445555566677788999999998888889999


Q ss_pred             HHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHH
Q 015813          191 IMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGIS  270 (400)
Q Consensus       191 ~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~  270 (400)
                      +|++++.+.++|+|-+..-..+.++++.|..+=...+..                   .+.-.+.|.+++++++++-|+.
T Consensus       140 vFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~-------------------~~~ls~~GvifGVlaSl~vAln  200 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS-------------------TGTLSWIGVIFGVLASLAVALN  200 (347)
T ss_pred             hHHHHhHHhhcccccccccceeehhheehheeccccccc-------------------cCccchhhhHHHHHHHHHHHHH
Confidence            999999999999999999999999988887664433211                   2245678999999999999999


Q ss_pred             HHHHHhhcc-CCCChHHHHHHHHHHHHHHHHHHHHhhcCc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 015813          271 YCLIKAGAN-ASDQPLVTVFSFGILASPAAGICLFFFEEF-------VLPSFYSFLLMLVLSILAFFAEVLLARGLQLEK  342 (400)
Q Consensus       271 ~v~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~  342 (400)
                      .+..|+... -.+..+...+|..+.++++++..+...++.       +.++...|..+...|++++...+.-.+-+|-.+
T Consensus       201 aiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TS  280 (347)
T KOG1442|consen  201 AIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTS  280 (347)
T ss_pred             HHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecc
Confidence            999998553 346678888999999988888777655432       234677888889999998554445556678888


Q ss_pred             ccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          343 TSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       343 a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      |-+-.+-..-......++++.+++|..+..-|-+-.+|+.|.....+.++
T Consensus       281 plThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  281 PLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             cceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence            88888888888888899999999999999999999999999888877543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.96  E-value=2.3e-08  Score=94.15  Aligned_cols=135  Identities=10%  Similarity=0.014  Sum_probs=106.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccC-----CCHHHHHHHHHHHHH
Q 015813          252 DHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVL-----PSFYSFLLMLVLSIL  326 (400)
Q Consensus       252 ~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gv~  326 (400)
                      +...|++++++++++|+...+..|.. . ..++....++..+.+.++.........++..     -+...+...+ .+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA-VSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHH-HHHH
Confidence            45689999999999999999999874 3 4567888888888877655544433222111     1334443333 4544


Q ss_pred             H-HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHH
Q 015813          327 A-FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       327 ~-~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~  389 (400)
                      + ++.+.++++++++.+++.++++.++.|++..++++++++|+++..+++|.++.+.|+.++..
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            4 78899999999999999999999999999999999999999999999999999999988764

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.95  E-value=1.9e-10  Score=100.24  Aligned_cols=274  Identities=12%  Similarity=0.051  Sum_probs=192.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (400)
                      +++.+++.++.|++...+..+.   +-.|.+-..-.-+-+.++.+.+++...+  ......+...++.|....+++...+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p--~~T~~~~iv~~isG~~Ws~GQ~~Qf   77 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSP--ELTLTIFIVGFISGAFWSFGQANQF   77 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecC--ccchhhHHHHHHhhhHhhhhhhhhh
Confidence            6788999999999999887763   3455555554444455554444444222  2334556677888899999999999


Q ss_pred             HHHhccchhhHHHHH-hhHHHHHHHHHHHHhcCcCcHHHH----HHHHHHHHhhhhhhccccccccccCCCcCCCccccc
Q 015813          172 YSIQRLPLSQATVLS-FTAPIMASIAARIILREKLKIAEI----GGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (400)
Q Consensus       172 ~al~~~~~~~a~~l~-~~~P~~~~ll~~~~l~e~~~~~~~----~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~  246 (400)
                      .|+++.+++++.++. ...-+-+.+++.+.++|+.+..+.    +++++.++|+++....+.....              
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~--------------  143 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE--------------  143 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc--------------
Confidence            999999999999995 566777888899999999998874    5677778888877766532111              


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHH
Q 015813          247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSIL  326 (400)
Q Consensus       247 ~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~  326 (400)
                      ....+..-.|....+.+.+.|-.|.++.+...   .+.+....-+.+...+...++...-.  .....+.-..-..-|+.
T Consensus       144 ~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~---v~g~saiLPqAiGMv~~ali~~~~~~--~~~~~K~t~~nii~G~~  218 (288)
T COG4975         144 EENPSNLKKGIVILLISTLGYVGYVVLFQLFD---VDGLSAILPQAIGMVIGALILGFFKM--EKRFNKYTWLNIIPGLI  218 (288)
T ss_pred             ccChHhhhhheeeeeeeccceeeeEeeecccc---ccchhhhhHHHHHHHHHHHHHhhccc--ccchHHHHHHHHhhHHH
Confidence            11123355788888899999999998888753   22333334444433333333332221  23333333344566777


Q ss_pred             HHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhh----hhhhHHHHHHHHHHHH
Q 015813          327 AFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGR----LVGCVLILVSVFYTMY  389 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~----~~G~~li~~g~~~~~~  389 (400)
                      -.++...+..+.++.+.+..=.+..+..+.+.+=|.++++|+=|..+    +.|+++++.|..+...
T Consensus       219 Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         219 WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            78999999999999998888888888899999999999999877655    6788888888777654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.95  E-value=1.8e-07  Score=83.44  Aligned_cols=222  Identities=9%  Similarity=0.080  Sum_probs=159.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcccccccccc
Q 015813          155 LLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVS  234 (400)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~  234 (400)
                      ..+.-+++...+..+.|.++.+++++.-.++.....+|+.+++.-+++++++.+||+|+....+|++++...+.....  
T Consensus        88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~--  165 (372)
T KOG3912|consen   88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT--  165 (372)
T ss_pred             eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc--
Confidence            445578899999999999999999999999999999999999999999999999999999999999998766543211  


Q ss_pred             CCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHHHHHHHHHHHhh-----c-
Q 015813          235 GGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGAN-ASDQPLVTVFSFGILASPAAGICLFFF-----E-  307 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-  307 (400)
                                +....-+.-..|+++.+.+-+.-|+.+++-.|..+ ...++.....+..+.+.++..+.....     + 
T Consensus       166 ----------~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~  235 (372)
T KOG3912|consen  166 ----------DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGD  235 (372)
T ss_pred             ----------CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCC
Confidence                      00011134567999999999999999998877554 456788888888888866655443321     1 


Q ss_pred             Ccc-CC--CHHHHHHH---------HHHHHHH-HHHHHHHH----HHhcccCccchhhhHhhHHHHHHHHHHHHhcccCc
Q 015813          308 EFV-LP--SFYSFLLM---------LVLSILA-FFAEVLLA----RGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPS  370 (400)
Q Consensus       308 ~~~-~~--~~~~~~~l---------~~~gv~~-~~~~~~~~----~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~  370 (400)
                      .+. .+  ...+|...         ++..+.+ .++-.+++    .--|+.+++.=.++-.+...+--+++.....|.++
T Consensus       236 sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~  315 (372)
T KOG3912|consen  236 SFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH  315 (372)
T ss_pred             cCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence            111 01  12223211         1222222 22222222    22345566666777777777777788888899999


Q ss_pred             hhhhhhhHHHHHHHHHHH
Q 015813          371 FGRLVGCVLILVSVFYTM  388 (400)
Q Consensus       371 ~~~~~G~~li~~g~~~~~  388 (400)
                      ..|+.|.++.+.|+++.+
T Consensus       316 llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  316 LLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999876

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.94  E-value=1.6e-08  Score=85.44  Aligned_cols=133  Identities=18%  Similarity=0.150  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccC------CCChHHHHHHHHHHHHHHHHHHHHhhcCccCC-------------CHHH
Q 015813          256 AVLVGLFSSITGGISYCLIKAGANA------SDQPLVTVFSFGILASPAAGICLFFFEEFVLP-------------SFYS  316 (400)
Q Consensus       256 G~l~~l~aa~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~  316 (400)
                      |.++++.+.++.|++.++.|+..++      ..++.....+....+.+...+..+..+.+...             +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5688999999999999999986654      55678888888888888888877766544310             2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHH
Q 015813          317 FLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTM  388 (400)
Q Consensus       317 ~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~  388 (400)
                      +..++..|+++.+-+...+..+++.+|...++...+..+...+.++++++|++++.+++|.++.+.|+++..
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            666677788889999999999999999999999999999999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.92  E-value=7.6e-08  Score=89.87  Aligned_cols=173  Identities=18%  Similarity=0.195  Sum_probs=118.7

Q ss_pred             CCccccccc-ccCCCCCcccccccccccchhhhhhcc-Cc-----chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHH
Q 015813           51 KPKTNIFSV-SYTRRKPREHVIETDTSLTNCMLWVWN-GS-----RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFET  123 (400)
Q Consensus        51 ~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~  123 (400)
                      +.....++. -..+|+.+.++..+......++..+.. ..     ...|.++.+.++++|+.+.+..|...  ..++...
T Consensus       107 p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~  184 (292)
T COG0697         107 PLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS--RLGPVTL  184 (292)
T ss_pred             HHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHH
Confidence            333334442 333666666665554444555554322 11     24799999999999999999999864  5667666


Q ss_pred             HH-HHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHH-HHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHh
Q 015813          124 VF-MRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRA-LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIIL  201 (400)
Q Consensus       124 ~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l  201 (400)
                      .. +.......+..+....... .......+......+ +....++.++++++++.++..++.+..+.|++..+++++++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~  263 (292)
T COG0697         185 ALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLL  263 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Confidence            66 3333222222222222222 122233334444444 44447999999999999999999999999999999999999


Q ss_pred             cCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          202 REKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       202 ~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      +|+++..+++|.++.+.|+.+....
T Consensus       264 ~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         264 GEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999988754

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.91  E-value=1.9e-08  Score=96.84  Aligned_cols=183  Identities=9%  Similarity=0.157  Sum_probs=125.5

Q ss_pred             cccccccCCCCcccccccccCCCCCcccccccccccchhhhhhcc---CcchHHHHHHHHHHHHHHHHHHHHHHhhcC--
Q 015813           42 ISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWN---GSRYSGLMCMALSSTIYFFMQVISDVFMVQ--  116 (400)
Q Consensus        42 ~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~--  116 (400)
                      ...+....+|..+-+++.-..+|+.+.++.........|+...-.   .....|.++++++.++|++.++..|....+  
T Consensus       142 ~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~  221 (350)
T PTZ00343        142 FTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKS  221 (350)
T ss_pred             HHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            333444444554555666666777777776655555555553321   123469999999999999999999998622  


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHHhh-CCCCc--------C-chhHHHHHHHHHHHHHHHHHHH----HHHHhccc
Q 015813          117 ----SIPLFETVFMRCTVTLILSYLWLRRS-GQPIF--------G-PMHARNLLVLRALVGFLSLFSF----VYSIQRLP  178 (400)
Q Consensus       117 ----~~~~~~~~~~r~~~~~l~l~~~~~~~-~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~----~~al~~~~  178 (400)
                          ++++.....+-..++.++++|+.... .....        . ........+...+...+.+.++    ++++++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s  301 (350)
T PTZ00343        222 EIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVN  301 (350)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence                36677777777788888877765422 11100        0 0000111111233334444444    47999999


Q ss_pred             hhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       179 ~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      +...++...+-|+++.++++++++|++++.+++|.++++.|+++-.
T Consensus       302 ~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        302 QVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             hhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999998754

>TIGR00688 rarD rarD protein

Probab=98.89  E-value=4.8e-08  Score=89.99  Aligned_cols=133  Identities=14%  Similarity=0.077  Sum_probs=107.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCc-------cCCCHHH-HHHHHHHHHH
Q 015813          255 LAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEF-------VLPSFYS-FLLMLVLSIL  326 (400)
Q Consensus       255 ~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~l~~~gv~  326 (400)
                      +|.++.++++++|+...+..|.. . +.++....++..+.+.+...+......+.       +..+... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            48899999999999999999984 3 46788888888888876655544332221       1122222 4445666676


Q ss_pred             HHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHH
Q 015813          327 AFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~  389 (400)
                      ....+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.++..
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999999999999999999999987754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.88  E-value=8.4e-08  Score=85.04  Aligned_cols=226  Identities=12%  Similarity=0.058  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccc
Q 015813          152 ARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQ  231 (400)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~  231 (400)
                      .|+.....++.....+.+-+-++.|++--.-.++..+--+=+++.+.++-|.|..+.+.++..+...|.+.....|... 
T Consensus       105 P~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~-  183 (367)
T KOG1582|consen  105 PWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT-  183 (367)
T ss_pred             chhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc-
Confidence            3455555566666666677777777776666666666666666778888999999999999999999999888766432 


Q ss_pred             cccCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 015813          232 AVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGAN-ASDQPLVTVFSFGILASPAAGICLFFFEEFV  310 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (400)
                                       ....+..|+.+.-.+-++-|+.--++.+..| ...+.....++...++.+.....+...++.-
T Consensus       184 -----------------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f  246 (367)
T KOG1582|consen  184 -----------------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELF  246 (367)
T ss_pred             -----------------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccch
Confidence                             1133567888887777777766655555444 3345556667777777777666655444321


Q ss_pred             -C------CCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHH
Q 015813          311 -L------PSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVS  383 (400)
Q Consensus       311 -~------~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g  383 (400)
                       .      ......++.+.....+.+++......++..++..++.++...-.++++++++++..++|....-|..+|+.|
T Consensus       247 ~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lg  326 (367)
T KOG1582|consen  247 SAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLG  326 (367)
T ss_pred             hhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHH
Confidence             1      123467777777777888888888899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCccc
Q 015813          384 VFYTMYIGPEKE  395 (400)
Q Consensus       384 ~~~~~~~~~~~~  395 (400)
                      +++-.+.+++|.
T Consensus       327 I~Ln~ysk~nk~  338 (367)
T KOG1582|consen  327 IYLNMYSKRNKI  338 (367)
T ss_pred             HHhhcccCCCCC
Confidence            999888875543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.87  E-value=1.1e-07  Score=80.20  Aligned_cols=131  Identities=21%  Similarity=0.273  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHHhhCCCC--------cC-----chhH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQ------SIPLFETVFMRCTVTLILSYLWLRRSGQPI--------FG-----PMHA  152 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~--------~~-----~~~~  152 (400)
                      |.++++.+.++.++..+..|....+      +.++.++..+....+.+++.+.....+...        ..     ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6788999999999999999988633      789999999999999988888755433221        00     2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhh
Q 015813          153 RNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLF  222 (400)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l  222 (400)
                      ...++..++..+..+.+.+..++++++...++....-.+++.+++.++++|+++..+++|++++++|+++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            5567777888889999999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.85  E-value=1.3e-07  Score=75.03  Aligned_cols=70  Identities=17%  Similarity=0.164  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhc
Q 015813          156 LVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (400)
Q Consensus       156 ~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~  225 (400)
                      .....++...++.++.+++++.|.+.+..+..+.++++.+++++++|||++++|++|++++++|++++..
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3334466778999999999999999999999999999999999999999999999999999999988753

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.82  E-value=1.6e-07  Score=76.34  Aligned_cols=121  Identities=20%  Similarity=0.172  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHH
Q 015813           91 SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSF  170 (400)
Q Consensus        91 ~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (400)
                      +|+++++.+.++-+...++.|.-. ++.+..+.... .. ..+      ...       .......+++.++..+++.+|
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~-~~-~~~------~~~-------~~p~~~i~lgl~~~~la~~~w   65 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWD-FI-AAL------LAF-------GLALRAVLLGLAGYALSMLCW   65 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhH-HH-HHH------HHH-------hccHHHHHHHHHHHHHHHHHH
Confidence            478999999999999999999875 44443332221 10 000      000       111346777888999999999


Q ss_pred             HHHHhccchhhHHHHHhhHHHHHHHHHHH--HhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          171 VYSIQRLPLSQATVLSFTAPIMASIAARI--ILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       171 ~~al~~~~~~~a~~l~~~~P~~~~ll~~~--~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      .+++++.|++.+.++....+.++.+.++.  ++||++++.+++|++++++|++++..++
T Consensus        66 ~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         66 LKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999888888885  8999999999999999999999987654

>TIGR00803 nst UDP-galactose transporter

Probab=98.80  E-value=6e-08  Score=87.37  Aligned_cols=208  Identities=11%  Similarity=0.124  Sum_probs=130.4

Q ss_pred             chhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcccccccc---cc-CC-CcCCCcccccccCCch
Q 015813          178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQA---VS-GG-LVKPGEAISLNVRGSD  252 (400)
Q Consensus       178 ~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~---~~-~~-~~~~~~~~~~~~~~~~  252 (400)
                      +......+.+..++++++..+.+.++|.++.++++.++...|++.....+.....   .. +. ..+.++..+.....+.
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~   82 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN   82 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence            4445566778889999999999999999999999999999998765443321100   00 00 0000000000111235


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChH-HHHHHHHHHHHHHHHHHHHhhcCccC--C-C-HHHHH-HHHHHHHH
Q 015813          253 HMLAVLVGLFSSITGGISYCLIKAGANASDQPL-VTVFSFGILASPAAGICLFFFEEFVL--P-S-FYSFL-LMLVLSIL  326 (400)
Q Consensus       253 ~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~-~l~~~gv~  326 (400)
                      .+.|....+.+..+-++..++.++..|.++... .......+.+.+...... ...+...  . . ...+. ......++
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVL-LWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHH-hhcccchhhccCcccCCchHHHHHHHH
Confidence            677888888888888888888888665443221 111112222222111111 1111110  0 0 00111 11223344


Q ss_pred             HHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHH
Q 015813          327 AFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFY  386 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~  386 (400)
                      ..+++.+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|+.+
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            577888899999999999999999999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.78  E-value=1.6e-07  Score=76.35  Aligned_cols=122  Identities=16%  Similarity=0.128  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHH-HHHHHH
Q 015813          255 LAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILA-FFAEVL  333 (400)
Q Consensus       255 ~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~-~~~~~~  333 (400)
                      .|.++.+++.++-+...++.|+..++.... ..... .. .    ....       ..++.   ..++.|+++ ++++.+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~-~~~~~-~~-~----~~~~-------~~~p~---~~i~lgl~~~~la~~~   64 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLL-SHAWD-FI-A----ALLA-------FGLAL---RAVLLGLAGYALSMLC   64 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCc-cchhH-HH-H----HHHH-------HhccH---HHHHHHHHHHHHHHHH
Confidence            377888999999999999999866532211 11110 00 0    0000       01111   135566665 899999


Q ss_pred             HHHHhcccCccchhhhHhhHHHHHHHHHHH--HhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          334 LARGLQLEKTSKVANVQYIEVALTQLWGMG--LSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       334 ~~~al~~~~a~~~s~~~~~~pv~a~i~~~l--~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                      |.+++++.+++++..+..+.+++..+.++.  ++||++++.+++|+++|++|++++.+.+++
T Consensus        65 w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         65 WLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            999999999999999999998888888885  899999999999999999999998765443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.67  E-value=5e-07  Score=84.72  Aligned_cols=128  Identities=18%  Similarity=0.234  Sum_probs=101.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHH----HHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCT----VTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFL  165 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (400)
                      .+|+++.++++++++.+.+..|..   +.+|....+....    .+.++..+.  ++. +... .+..+..++.|+...+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~~-~~~~~~~~~~Gi~~~i  223 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA-KPLK-KYAILLNILPGLMWGI  223 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--hcc-cchH-HHHHHHHHHHHHHHHH
Confidence            579999999999999999999974   4788888555554    333333333  111 1122 2233344447777889


Q ss_pred             HHHHHHHHHh-ccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHH----HHHHHHHHhhhhhh
Q 015813          166 SLFSFVYSIQ-RLPLSQATVLSFTAPIMASIAARIILREKLKIAEI----GGLALSFFGVLFIF  224 (400)
Q Consensus       166 ~~~~~~~al~-~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~----~g~~l~~~Gv~l~~  224 (400)
                      ++.+|+.+.+ +.+++.++++....|+...+.+.+++||+.+++++    +|.++.+.|+.++.
T Consensus       224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            9999999999 99999999999999999999999999999999999    99999999998874

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.64  E-value=5.3e-07  Score=80.32  Aligned_cols=263  Identities=9%  Similarity=0.038  Sum_probs=167.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHHHHhc-cchhhHHHHHhhHHHHHHHHHHH
Q 015813          121 FETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQR-LPLSQATVLSFTAPIMASIAARI  199 (400)
Q Consensus       121 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~a~~l~~~~P~~~~ll~~~  199 (400)
                      -.++|..+++-..--++..-.-  ...+++-.++.........+..+.+-+++++. +|...=.++-.-.++-+++++++
T Consensus        34 NLITFaqFlFia~eGlif~skf--~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~i  111 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKF--FTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWI  111 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccc--cccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHH
Confidence            6677777776655444433111  11112223344444455566778888999996 67777777788899999999999


Q ss_pred             HhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCcccccc-cCCchhHHHHHHHHHHHHHHHHHHHHHHhh-
Q 015813          200 ILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLN-VRGSDHMLAVLVGLFSSITGGISYCLIKAG-  277 (400)
Q Consensus       200 ~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~-  277 (400)
                      ++|+|.+.+|+..+++.-+|+++....+..+...    ...+-+.++. .....-..|+.+..++-+..|.-.+.+... 
T Consensus       112 l~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~----~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y  187 (330)
T KOG1583|consen  112 LLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS----KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTY  187 (330)
T ss_pred             hccceeehhhhhhHHhhhhhheeEEeecCcchhh----hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998876544332110    0000011111 111234457666666666666555544332 


Q ss_pred             ccCCCChHHHHHHHHHHHHHHHHHHHH----------hhcCccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 015813          278 ANASDQPLVTVFSFGILASPAAGICLF----------FFEEFVLP-----SFYSFLLMLVLSILAFFAEVLLARGLQLEK  342 (400)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-----~~~~~~~l~~~gv~~~~~~~~~~~al~~~~  342 (400)
                      .|.+.++...++|.-...++.++...-          ..+....|     -+..|.+++.-.+.-...---.+..-.+..
T Consensus       188 ~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~  267 (330)
T KOG1583|consen  188 QKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETS  267 (330)
T ss_pred             HHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceec
Confidence            222345667788888888777665431          01111111     345666665544443222222333345667


Q ss_pred             ccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHH
Q 015813          343 TSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       343 a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~  389 (400)
                      +-.++++..+.-.++.+++.+.++.++++..++|..+++.|.++...
T Consensus       268 sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  268 SLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             ceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            78888999999999999999999999999999999999999887664

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.60  E-value=2.3e-07  Score=84.70  Aligned_cols=273  Identities=19%  Similarity=0.130  Sum_probs=170.4

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHH
Q 015813           87 GSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLS  166 (400)
Q Consensus        87 ~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (400)
                      .+...|.++.+.+.++.+....+.|... .+...   .              -.+.+...++..+. +.+..+.+...++
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl-~r~~~---~--------------~~ra~~gg~~yl~~-~~Ww~G~ltm~vG   77 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGL-KRAGA---S--------------GLRAGEGGYGYLKE-PLWWAGMLTMIVG   77 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHH-HHHhh---h--------------cccccCCCcchhhh-HHHHHHHHHHHHH
Confidence            3456788899999999999888888743 11110   0              01111111111111 3344556667788


Q ss_pred             HHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccccccccCCCcCCCccccc
Q 015813          167 LFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (400)
Q Consensus       167 ~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~  246 (400)
                      ..+-|.|+...|++..+++-.++.++..+++..+++||+++...+|.+++++|-.++.......+.         -.+.+
T Consensus        78 ei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~---------i~t~~  148 (335)
T KOG2922|consen   78 EIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE---------IESVE  148 (335)
T ss_pred             hHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc---------cccHH
Confidence            888999999999999999999999999999999999999999999999999999877754422111         00000


Q ss_pred             c----cCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHH---------HH--HHhhcCccC
Q 015813          247 N----VRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAG---------IC--LFFFEEFVL  311 (400)
Q Consensus       247 ~----~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~~  311 (400)
                      +    ..+...+.- ...+...  ..+-....|.   ++. ......|..+++.+-.+         +.  ....+..+.
T Consensus       149 el~~~~~~~~Fliy-~~~iil~--~~il~~~~~p---~~g-~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql  221 (335)
T KOG2922|consen  149 EVWELATEPGFLVY-VIIIILI--VLILIFFYAP---RYG-QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQL  221 (335)
T ss_pred             HHHHHhcCccHHHH-HHHHHHH--HHHHheeecc---ccc-ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCccc
Confidence            0    111111111 1111111  1112222332   111 11222333333322110         11  112223344


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHh-hHHHHHHHHHHHHhcccCc------hhhhhhhHHHHHHH
Q 015813          312 PSFYSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQY-IEVALTQLWGMGLSRIAPS------FGRLVGCVLILVSV  384 (400)
Q Consensus       312 ~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~-~~pv~a~i~~~l~l~e~~~------~~~~~G~~li~~g~  384 (400)
                      ..+..|..++.+..+...-....++|++..+++.++++.| +--.++++-+.++++|.-.      ...+.|+..++.|+
T Consensus       222 ~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~  301 (335)
T KOG2922|consen  222 FYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGI  301 (335)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhhee
Confidence            4567787777777777777888999999999999998888 6677888999999998532      23578999999999


Q ss_pred             HHHHHcCCcc
Q 015813          385 FYTMYIGPEK  394 (400)
Q Consensus       385 ~~~~~~~~~~  394 (400)
                      .++...++++
T Consensus       302 flL~~~kd~~  311 (335)
T KOG2922|consen  302 FLLHRTKDME  311 (335)
T ss_pred             eEeeeecccc
Confidence            9886655443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.56  E-value=7e-07  Score=84.34  Aligned_cols=192  Identities=18%  Similarity=0.080  Sum_probs=142.5

Q ss_pred             CCCCccccccccccCCCCcccccccccCCCCCcccccccccccchhhhhh------------ccCcchHHHHHHHHHHHH
Q 015813           35 GGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWV------------WNGSRYSGLMCMALSSTI  102 (400)
Q Consensus        35 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~G~ll~l~a~~~  102 (400)
                      -++|+-....+++...-|..-.+|.-..++|-+..+..+......|+..+            -+.++.+|.++++.++++
T Consensus       100 ~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~l  179 (334)
T PF06027_consen  100 YQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAIL  179 (334)
T ss_pred             hhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHH
Confidence            35555666667777777777777877778877777655554444444421            124678999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCC---CcC-chhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 015813          103 YFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQP---IFG-PMHARNLLVLRALVGFLSLFSFVYSIQRLP  178 (400)
Q Consensus       103 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~~  178 (400)
                      ++.++++.+... ++.+..+...+-.+++.++..+.+....+.   ... ..+.....+...++.+..+.+.-..+++.+
T Consensus       180 ya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ss  258 (334)
T PF06027_consen  180 YAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSS  258 (334)
T ss_pred             HHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            999999999886 788999998888888888776654422221   111 122233334444555666667778899999


Q ss_pred             hhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       179 ~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      ++...+=.-+..++++++..+++|++++|..++|.+++++|+++....+
T Consensus       259 At~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  259 ATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             cceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            9988888888999999999999999999999999999999999886544

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.54  E-value=1.9e-06  Score=77.96  Aligned_cols=136  Identities=13%  Similarity=0.058  Sum_probs=117.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccC-----CCHHHHHHHHHHHHHHH
Q 015813          254 MLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVL-----PSFYSFLLMLVLSILAF  328 (400)
Q Consensus       254 ~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~  328 (400)
                      ..|+++++.+-+.|+....+.|-+.  ..+......+-.+-+.++..+......++..     -+++.+......+++-.
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLE--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            3699999999999999999999864  4667788888888888888777766655542     36677878788888778


Q ss_pred             HHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcC
Q 015813          329 FAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIG  391 (400)
Q Consensus       329 ~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~  391 (400)
                      .-...|.|+.+......++.--+++|.+.+++|.++++|+++..|++..++..+|+....+..
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999999999999999999998877653

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.51  E-value=3.8e-06  Score=74.14  Aligned_cols=134  Identities=14%  Similarity=0.048  Sum_probs=110.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHH-HHHHHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARN-LLVLRALVGFLSL  167 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  167 (400)
                      ...|..+.+.+..||+.|-+..|.+. +..+.-.-+..-++++.++.+|+-..........+.... .+..+.+...+-|
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g-~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAG-RAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhc-ccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccch
Confidence            35799999999999999999999875 577777888888999999998887655544444444333 3344445556888


Q ss_pred             HHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhh
Q 015813          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (400)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~  223 (400)
                      .+-..++++.|...-+++.++.|.+..+.++++++|++++.||+++..++.+..-.
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999998887633

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.50  E-value=9.7e-07  Score=70.51  Aligned_cols=78  Identities=19%  Similarity=0.202  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          315 YSFLLMLVLSILA-FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       315 ~~~~~l~~~gv~~-~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                      +.|.+.+..|+++ ..++.++.+++++.+ ..++.+..+.|+++.++++++++|+++..+++|.+++++|++++.+.+.+
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            4456677777777 599999999999999 48889999999999999999999999999999999999999999887644

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.42  E-value=5.5e-06  Score=65.70  Aligned_cols=66  Identities=15%  Similarity=0.015  Sum_probs=61.0

Q ss_pred             HHHH-HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHH
Q 015813          324 SILA-FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       324 gv~~-~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~  389 (400)
                      ++++ ++++.++..++++.+.+++..+.++.++++.+++++++||++++.+++|.++++.|+.++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3344 78999999999999999999999999999999999999999999999999999999988754

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=98.23  E-value=0.0019  Score=60.30  Aligned_cols=289  Identities=12%  Similarity=0.083  Sum_probs=179.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCC------cCchhHHHHHHHHHH
Q 015813           88 SRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPI------FGPMHARNLLVLRAL  161 (400)
Q Consensus        88 ~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~------~~~~~~~~~~~~~~~  161 (400)
                      +-..|+++..+.+++-+...+-.|+.  ++.+-...=....+++.+++..+.....-+.      ..+.+.....++.|+
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            44579999999999999999999984  5665555555555566554433322211111      122345666777788


Q ss_pred             HHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhc-------CcCcHHHHHHHHHHHHhhhhhhccccccccc
Q 015813          162 VGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILR-------EKLKIAEIGGLALSFFGVLFIFRRILTTQAV  233 (400)
Q Consensus       162 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~-------e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~  233 (400)
                      ...++...|-.+++|++.+...-+ ..+.-++..++-.++.+       .+-...-++|++++++|+.+....+..-+. 
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~-  160 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK-  160 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh-
Confidence            888999999999999988887554 56777777777666544       233456799999999999998876543221 


Q ss_pred             cCCCcCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcc-------CCCChHHHH----HHHHHHHHHHHHHH
Q 015813          234 SGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGAN-------ASDQPLVTV----FSFGILASPAAGIC  302 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~-------~~~~~~~~~----~~~~~~~~~~~~~~  302 (400)
                              +. .++..+.+--+|.++++++.+..|..+.-......       ...++....    ......+.+.-++.
T Consensus       161 --------~~-~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~y  231 (344)
T PF06379_consen  161 --------EL-GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIY  231 (344)
T ss_pred             --------hh-ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHH
Confidence                    11 11122234568999999999999988874433111       111111111    11112222222232


Q ss_pred             HHhh----cCcc---------CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCcc----chhhhHhhHHHHHHHHHHHHh
Q 015813          303 LFFF----EEFV---------LPSFYSFLLMLVLSILAFFAEVLLARGLQLEKTS----KVANVQYIEVALTQLWGMGLS  365 (400)
Q Consensus       303 ~~~~----~~~~---------~~~~~~~~~l~~~gv~~~~~~~~~~~al~~~~a~----~~s~~~~~~pv~a~i~~~l~l  365 (400)
                      .+..    .++.         ++-...+..-+..|++-...+.+|-++-.+.++.    --.+.+.+..+++-++|.+ +
T Consensus       232 c~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-l  310 (344)
T PF06379_consen  232 CLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-L  310 (344)
T ss_pred             HHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-H
Confidence            2211    1121         1113445555666666678888888888888754    3347788899999999965 6


Q ss_pred             cccC------chhhhhhhHHHHHHHHHHHH
Q 015813          366 RIAP------SFGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       366 ~e~~------~~~~~~G~~li~~g~~~~~~  389 (400)
                      +|.=      -..-++|+++++.++.++-+
T Consensus       311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  311 KEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            8842      23347888888887776643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.16  E-value=4.9e-05  Score=69.24  Aligned_cols=129  Identities=19%  Similarity=0.254  Sum_probs=95.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHH
Q 015813           88 SRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSL  167 (400)
Q Consensus        88 ~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (400)
                      +..+|++..+++.+.+..+.+..|.   .+.++....+=...-..+-...+.... ++.... +..+.-.+.|+...+++
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~---~~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~~-k~~~~nil~G~~w~ign  209 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKA---FHVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFFE-KKSWKNILTGLIWGIGN  209 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHh---cCCChhHhHHHHHHHHHHHHHHHhhcc-cccccc-cchHHhhHHHHHHHHHH
Confidence            3467999999999999999999997   457887776644433333333332222 222222 33455677899999999


Q ss_pred             HHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHH----HHHHHHHhhh
Q 015813          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIG----GLALSFFGVL  221 (400)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~----g~~l~~~Gv~  221 (400)
                      .+++.+.+..+.+.+-.+..+.+++..+-+.+++||+-+++++.    |+++.++|.+
T Consensus       210 l~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  210 LFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999988764    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.13  E-value=9.9e-05  Score=69.73  Aligned_cols=136  Identities=19%  Similarity=0.243  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHh--hCCCC------cCchhHHHHHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRR--SGQPI------FGPMHARNLLVLRALV  162 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~--~~~~~------~~~~~~~~~~~~~~~~  162 (400)
                      |+++++++.++-+...+..+... ..+.++.+.+++....+.++..+....  .+...      ...++....+++..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            99999999999999999999886 457899999999999998877766555  22211      1122355667778888


Q ss_pred             HHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       163 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      ..+++.+.++-.++.++...+++..+--+++.+++.+++++++++.+|.|+++.+.|..+=..++
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            88999999999999999999999999999999999999999999999999999999998866544

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=98.04  E-value=0.00024  Score=58.67  Aligned_cols=130  Identities=19%  Similarity=0.289  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCC-HHHHHHHHHHHHHHHHHHHHHhhCCC-CcCchhHHHHHHHHHHHHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQSIP-LFETVFMRCTVTLILSYLWLRRSGQP-IFGPMHARNLLVLRALVGFLSLFS  169 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  169 (400)
                      ..++.+++..+-+....+.-.+. +..+ |....++.+..+.+.+..+....+++ ....++..++.+++|+.+.....+
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~-~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~   80 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLG-KALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLS   80 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHH
Confidence            35678888888888888887775 5565 99999999999998877766554442 222234456677799999999999


Q ss_pred             HHHHHhccchhhHHHHHhhHHHHHH-HHHHH----HhcCcCcHHHHHHHHHHHHhhhh
Q 015813          170 FVYSIQRLPLSQATVLSFTAPIMAS-IAARI----ILREKLKIAEIGGLALSFFGVLF  222 (400)
Q Consensus       170 ~~~al~~~~~~~a~~l~~~~P~~~~-ll~~~----~l~e~~~~~~~~g~~l~~~Gv~l  222 (400)
                      ..+...+++++.+..+.-..-++.. ++.++    .-++++++.+++|+.+.++|+.+
T Consensus        81 ~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   81 NIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            9999999999999888665555544 44554    35689999999999999999864

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=98.01  E-value=0.0002  Score=56.17  Aligned_cols=70  Identities=19%  Similarity=0.169  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhh
Q 015813          154 NLLVLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (400)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~  223 (400)
                      .......+....++++...+++++|.+.+-.+ ....-+.+.+.+.+++||++++.|++|+.+++.|++.+
T Consensus        36 ~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         36 IYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            33455577778899999999999999999776 56889999999999999999999999999999999886

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.97  E-value=6.7e-05  Score=59.93  Aligned_cols=72  Identities=18%  Similarity=0.308  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhHHHHH-hhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          156 LVLRALVGFLSLFSFVYSIQRLPLSQATVLS-FTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       156 ~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~-~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      ..+..++...+++++..+++++|.+.+-.+. .+.-+.+.+++.+++||++++.+++|+.++++|++++...+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3456777888999999999999999998885 69999999999999999999999999999999998886443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.92  E-value=0.00011  Score=57.95  Aligned_cols=71  Identities=20%  Similarity=0.203  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          156 LVLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       156 ~~~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      .....++..+++.++..+++++|.+.+-.+ ..+.-+.+.+++++++||++++.+++|+.++++|++++...
T Consensus        33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            345577778889999999999999999887 56899999999999999999999999999999999998643

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.89  E-value=0.00011  Score=56.73  Aligned_cols=73  Identities=19%  Similarity=0.242  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          154 NLLVLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      +..++..++...++.+.-.+++++|.+.+-.+ .....+.+.+.+++++||++++.+++|+.+.++|++.+...
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34455567778899999999999999999766 67999999999999999999999999999999999987543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.88  E-value=7.7e-05  Score=59.60  Aligned_cols=68  Identities=9%  Similarity=0.073  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHhcccCccchhhh-HhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcc
Q 015813          327 AFFAEVLLARGLQLEKTSKVANV-QYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEK  394 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~~s~~-~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~  394 (400)
                      -+++++++..++|+.+.+.+=.+ ..+..+.+.++++++++|++++.+++|..+|+.|++.+....+++
T Consensus        40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~  108 (120)
T PRK10452         40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA  108 (120)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence            38899999999999998776555 568899999999999999999999999999999999998766544

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.84  E-value=0.0002  Score=55.89  Aligned_cols=71  Identities=18%  Similarity=0.255  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          154 NLLVLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      .......++...++++...+++++|.+.+-.+ ..+.-+.+.+++.+++||++++.+++|+.+.++|++.+.
T Consensus        30 ~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         30 TPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            33444577778899999999999999999776 559999999999999999999999999999999999874

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.80  E-value=0.00025  Score=67.21  Aligned_cols=132  Identities=14%  Similarity=0.064  Sum_probs=97.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHH---------hhcCccCCCHHHHHHHHHH
Q 015813          253 HMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLF---------FFEEFVLPSFYSFLLMLVL  323 (400)
Q Consensus       253 ~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~  323 (400)
                      ...|+++++++++|++..++-.|+ .|.-  .+... |. +.+....++..+         ..+..+..+...+..-+..
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w--~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKKW--SWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCCC--chhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            568999999999999999999998 4322  22222 22 222211111111         1122334567778888888


Q ss_pred             HHHHHHHHHHHHHHhcccCccchhhhHh-hHHHHHHHHHHHHhcccC---c----hhhhhhhHHHHHHHHHHHH
Q 015813          324 SILAFFAEVLLARGLQLEKTSKVANVQY-IEVALTQLWGMGLSRIAP---S----FGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       324 gv~~~~~~~~~~~al~~~~a~~~s~~~~-~~pv~a~i~~~l~l~e~~---~----~~~~~G~~li~~g~~~~~~  389 (400)
                      |++-.+++..+..++|+.+.++.-.+.. ++-+++.+++.+++||..   +    ..-++|.+++++|+.+..+
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            8888999999999999999999887776 999999999999999754   2    2358899999999999988

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.77  E-value=0.0001  Score=57.96  Aligned_cols=109  Identities=12%  Similarity=0.080  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015813           98 LSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL  177 (400)
Q Consensus        98 ~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  177 (400)
                      +.+++||.++.++|... ++.++..-.. +..-....+     .         . .+.+.+.-...-.+...|++.+.+.
T Consensus         3 ~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~~L-----l---------~-n~~y~ipf~lNq~GSv~f~~~L~~~   65 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIKFL-----L---------L-NPKYIIPFLLNQSGSVLFFLLLGSA   65 (113)
T ss_pred             eehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHHHH-----H---------H-hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            45688999999999986 4443333221 322111110     0         0 1223334455567788899999999


Q ss_pred             chhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhh
Q 015813          178 PLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (400)
Q Consensus       178 ~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~  223 (400)
                      +.+.+.++ +.+.=++|++.++++.+|..+++.++|+.+++.|+.+.
T Consensus        66 dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   66 DLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             CceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999 47888999999988777888999999999999999764

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.71  E-value=2e-05  Score=69.42  Aligned_cols=138  Identities=14%  Similarity=0.171  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015813          256 AVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLA  335 (400)
Q Consensus       256 G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~  335 (400)
                      ..+.+|+-++.|+..-....+..   ..|.......++.++++..+..+.  .-..++...+..-+..|.+-.++|..++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G---G~p~qQ~lGtT~GALifaiiv~~~--~~p~~T~~~~iv~~isG~~Ws~GQ~~Qf   77 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG---GKPYQQTLGTTLGALIFAIIVFLF--VSPELTLTIFIVGFISGAFWSFGQANQF   77 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC---CChhHhhhhccHHHHHHHHHHhee--ecCccchhhHHHHHHhhhHhhhhhhhhh
Confidence            56888999999988777666643   224444445555555554444333  1223466677777777888899999999


Q ss_pred             HHhcccCccchhhhHh-hHHHHHHHHHHHHhcccCchhh----hhhhHHHHHHHHHHHHcCCcccccc
Q 015813          336 RGLQLEKTSKVANVQY-IEVALTQLWGMGLSRIAPSFGR----LVGCVLILVSVFYTMYIGPEKEMND  398 (400)
Q Consensus       336 ~al~~~~a~~~s~~~~-~~pv~a~i~~~l~l~e~~~~~~----~~G~~li~~g~~~~~~~~~~~~~~~  398 (400)
                      ++++..+.+++.++.. ++-+-+.++|++++||..+..+    .++.++++.|+++..++++.+++++
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~  145 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEE  145 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccccc
Confidence            9999999999998877 8899999999999999988776    4466778888888888776555443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.68  E-value=0.00027  Score=55.72  Aligned_cols=65  Identities=18%  Similarity=0.190  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHhcccCccchhhh-HhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          328 FFAEVLLARGLQLEKTSKVANV-QYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       328 ~~~~~~~~~al~~~~a~~~s~~-~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      .+++.++..++++.+.+.+=.+ .-+..+.+.++++++++|++++.+++|+.+|+.|++.++..++
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~  106 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR  106 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            7888999999999998766544 5688889999999999999999999999999999999977554

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.66  E-value=0.00059  Score=56.33  Aligned_cols=129  Identities=15%  Similarity=0.049  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCC---HHHHHHHHHHHHHHHHHHH
Q 015813          256 AVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPS---FYSFLLMLVLSILAFFAEV  332 (400)
Q Consensus       256 G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gv~~~~~~~  332 (400)
                      ..++++++..+-++...+..++.++..++....+.....+.+...+......+.+...   ...|.++  -|+++.+...
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l--GG~lG~~~V~   79 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL--GGLLGVFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc--cHHHHHHHHH
Confidence            3567888888888888888887765554666666666777777666666554433222   2223332  5677888888


Q ss_pred             HHHHHhcccCccchhhhHh-hHHHHHHHHHHH----HhcccCchhhhhhhHHHHHHHHH
Q 015813          333 LLARGLQLEKTSKVANVQY-IEVALTQLWGMG----LSRIAPSFGRLVGCVLILVSVFY  386 (400)
Q Consensus       333 ~~~~al~~~~a~~~s~~~~-~~pv~a~i~~~l----~l~e~~~~~~~~G~~li~~g~~~  386 (400)
                      +..+.+++.+++....+.. -|-+.+.+++.+    .-++++++.+++|..+++.|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            9999999999977776555 788888888886    34468999999999999999763

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.61  E-value=0.00021  Score=66.90  Aligned_cols=139  Identities=17%  Similarity=0.262  Sum_probs=110.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHH-HHHHhhCCCCc------CchhHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFM---VQSIPLFETVFMRCTVTLILSY-LWLRRSGQPIF------GPMHARNLLVL  158 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~---~~~~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~------~~~~~~~~~~~  158 (400)
                      ...|.+.++.+.+..++.+++.|...   ..+++++++..+..-++.++++ |+.........      ...-.....+.
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            56799999999999999999999987   3469999999999999988888 87554332221      11111222333


Q ss_pred             HHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          159 RALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       159 ~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      ..++.+..+...|..+.++++..-++....-=+++...++++++++.++.+.+|.+++++|+++=.+-+
T Consensus       241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            337777778888999999999999999888888888899999999999999999999999998865443

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.58  E-value=0.00021  Score=67.09  Aligned_cols=124  Identities=19%  Similarity=0.185  Sum_probs=89.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHHHHH
Q 015813          251 SDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFA  330 (400)
Q Consensus       251 ~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~  330 (400)
                      .+...|.++++.++++.+....+.|+..++.+.. ..  ..               .....+...+..|..++. +..++
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~-~~--~~---------------~~~~~~~l~~~~W~~G~~-~~~~g   63 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG-SL--RA---------------GSGGRSYLRRPLWWIGLL-LMVLG   63 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc--cc---------------cchhhHHHhhHHHHHHHH-HHhcc
Confidence            3467899999999999999999999855432210 00  00               000001112222222221 12567


Q ss_pred             HHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCc
Q 015813          331 EVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPE  393 (400)
Q Consensus       331 ~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~  393 (400)
                      ..+.+.++...+++.++++..+..++..+++..+++|+++..+++|+++++.|..+......+
T Consensus        64 ~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~  126 (300)
T PF05653_consen   64 EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPK  126 (300)
T ss_pred             hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCC
Confidence            778889999999999999999999999999999999999999999999999999877655443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.47  E-value=8.9e-05  Score=66.12  Aligned_cols=136  Identities=13%  Similarity=0.107  Sum_probs=112.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCc-CchhHHHHHHHHHHHHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIF-GPMHARNLLVLRALVGFLSLF  168 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  168 (400)
                      .+|....+.++++-+...+..|.+. ++.+......+-.+++.+..++.+..-+...+ .-.+.|+..+..|+++++++.
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iG-k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgfigQI  268 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIG-KNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGFIGQI  268 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhh-ccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhhHHHH
Confidence            4567788888888888889999986 88888888888888888777776665543322 223455666777999999999


Q ss_pred             HHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      +...++|.--++..++...+..+|..+...+|++|.|++..|.|.++++...+.....
T Consensus       269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~  326 (346)
T KOG4510|consen  269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK  326 (346)
T ss_pred             HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999888777665543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.41  E-value=0.0029  Score=57.81  Aligned_cols=136  Identities=15%  Similarity=0.161  Sum_probs=114.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCC------cCchhHHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRRSGQPI------FGPMHARNLLVLRAL  161 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~------~~~~~~~~~~~~~~~  161 (400)
                      ...|+.++....++=|+.+...+.+. ...++++++.+.-.+...+.........+...      ...++.++.+++-..
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            45699999999999999999888876 34789999999999988887666543333221      123567788999999


Q ss_pred             HHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          162 VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       162 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      +++.++.+.++-+++-++-.-+.++-+--++..+++.+.++.++++.||+|+.+.+.|+.+=.
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEI  312 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999987644

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.37  E-value=0.0025  Score=48.79  Aligned_cols=61  Identities=20%  Similarity=0.276  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHH
Q 015813          156 LVLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALS  216 (400)
Q Consensus       156 ~~~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~  216 (400)
                      ......+...+++++..+++++|.+.+-.+ ..+..+.+.+++.+++||++++.|++|+.++
T Consensus        32 ~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   32 TILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             --HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            334455778889999999999999999776 4699999999999999999999999999863

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.37  E-value=0.0023  Score=60.06  Aligned_cols=142  Identities=13%  Similarity=0.005  Sum_probs=108.8

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHH---hhCCCC---cCchhHHHHHHH
Q 015813           88 SRYSGLMCMALSSTIYFFMQVISDVFMV---QSIPLFETVFMRCTVTLILSYLWLR---RSGQPI---FGPMHARNLLVL  158 (400)
Q Consensus        88 ~~~~G~ll~l~a~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~l~l~~~~~---~~~~~~---~~~~~~~~~~~~  158 (400)
                      +...|.++++++++.++.+.++.|.-..   +.++--.+..+-.++..+++.|.+.   ..+.+.   +...+....++.
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            4578999999999999999999998652   2466666666667777777665433   222221   122233334555


Q ss_pred             HHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccccc
Q 015813          159 RALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILT  229 (400)
Q Consensus       159 ~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~  229 (400)
                      +.+..+++-++|.+|.-.+++-.+++-..+..-..++.-.++-+.++++..++|...+++|.+++..++..
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            66777789999999999999999999888887788888888889999999999999999999999887644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.30  E-value=0.0014  Score=50.68  Aligned_cols=64  Identities=25%  Similarity=0.084  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHhcccCccc-hhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcC
Q 015813          328 FFAEVLLARGLQLEKTSK-VANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIG  391 (400)
Q Consensus       328 ~~~~~~~~~al~~~~a~~-~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~  391 (400)
                      .+++.+...++|+.+.+. .++..-+-.+.+.+.|+++++|++++.+++|..+++.|++.++...
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            788999999999998754 4677778999999999999999999999999999999999887643

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.23  E-value=0.0022  Score=50.03  Aligned_cols=64  Identities=19%  Similarity=0.102  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHhcccCccc-hhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHc
Q 015813          327 AFFAEVLLARGLQLEKTSK-VANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYI  390 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~-~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~  390 (400)
                      -.+++++...++|+.+.+. .++..-+..+.+.+.++++++|++++.+++|+.+++.|++.++..
T Consensus        39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            3889999999999998755 456666889999999999999999999999999999999988643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.20  E-value=0.002  Score=50.61  Aligned_cols=62  Identities=19%  Similarity=0.031  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHhcccCccch-hhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHH
Q 015813          327 AFFAEVLLARGLQLEKTSKV-ANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTM  388 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~~-s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~  388 (400)
                      -.+++++...++|+.+.+.+ ++..-+..+.+.+.++++++|++++.+++|..+|+.|++.++
T Consensus        45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            37899999999999997554 566668889999999999999999999999999999998874

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.13  E-value=0.0089  Score=49.44  Aligned_cols=135  Identities=11%  Similarity=-0.022  Sum_probs=92.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCC----HHHHHHHHHHHHHHH
Q 015813          253 HMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPS----FYSFLLMLVLSILAF  328 (400)
Q Consensus       253 ~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gv~~~  328 (400)
                      .+...++++++..+-.+..-+..++.+...++....+.....+.+.+.+.....+....+.    ...|.++  -|+++.
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~--GG~lGa   80 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWI--GGLLGA   80 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHH--ccchhh
Confidence            3467888999999999999988888775566767677666777666666555543322221    1223332  235665


Q ss_pred             HHHHHHHHHhcccCcc-chhhhHhhHHHHHHHHHHHHhc----ccCchhhhhhhHHHHHHHHHHHH
Q 015813          329 FAEVLLARGLQLEKTS-KVANVQYIEVALTQLWGMGLSR----IAPSFGRLVGCVLILVSVFYTMY  389 (400)
Q Consensus       329 ~~~~~~~~al~~~~a~-~~s~~~~~~pv~a~i~~~l~l~----e~~~~~~~~G~~li~~g~~~~~~  389 (400)
                      +--........+.+++ .......-|-+.+++++.+=+.    .+++...++|++++++|+++...
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            5556666777888764 4555666888888888876555    57899999999999999555433

>TIGR00803 nst UDP-galactose transporter

Probab=97.12  E-value=0.0039  Score=55.97  Aligned_cols=131  Identities=13%  Similarity=0.116  Sum_probs=84.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHH----HHHHHHHHHHHhhCCCC---cC-chhHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCT----VTLILSYLWLRRSGQPI---FG-PMHARNLLVLRA  160 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~---~~-~~~~~~~~~~~~  160 (400)
                      ...|..+.+.++.+-++..+..+... +.-+..  ...|..    ...+.............   .. -.+.....+...
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~-k~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKIL-KDGDTM--FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG  159 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcc-cCCCCc--hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence            34577778888888888888877764 322111  111111    11111111111111110   00 011122233344


Q ss_pred             HHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhh
Q 015813          161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLF  222 (400)
Q Consensus       161 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l  222 (400)
                      +....+..+..+.+++.+....+....+.++++.+++.++++|+++..+++|+.+++.|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            66677778889999999999999999999999999999999999999999999999998753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.04  E-value=0.034  Score=46.00  Aligned_cols=134  Identities=18%  Similarity=0.213  Sum_probs=91.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHHHHHHHHHh-hCCCCcC-chhHHHHHHHHHHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFMVQSI-PLFETVFMRCTVTLILSYLWLRR-SGQPIFG-PMHARNLLVLRALVGFLS  166 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~~~~~-~~~~~~~~r~~~~~l~l~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  166 (400)
                      ...++..+.+..+-...+.+.-.+. +.. +|+...+..+..+.+.+..+... ++++... .++..++.+.+|+.+...
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~-~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLA-RYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHH-HHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhh
Confidence            3467778888888888888877665 444 59999999999887766655444 2222221 133345667777777777


Q ss_pred             HHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHH-h---cCcCcHHHHHHHHHHHHhhhhhh
Q 015813          167 LFSFVYSIQRLPLSQATVL-SFTAPIMASIAARII-L---REKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       167 ~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~-l---~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      -..-.....+++++....+ ..-+-+...++..+= +   ++++++.+++|+++.++|++++-
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            7777777888877777665 445555555555442 2   47899999999999999955543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.86  E-value=0.0097  Score=45.49  Aligned_cols=53  Identities=19%  Similarity=0.061  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHhcccCccch-hhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHH
Q 015813          328 FFAEVLLARGLQLEKTSKV-ANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLI  380 (400)
Q Consensus       328 ~~~~~~~~~al~~~~a~~~-s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li  380 (400)
                      .+++.++..++|+.+.+.+ ++..-+..+...+.+.+++||++++.+++|+.+|
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            7888999999999999888 4455689999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.86  E-value=0.022  Score=51.80  Aligned_cols=180  Identities=11%  Similarity=0.053  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (400)
                      |++..+++++++|.+.+=.|..  +..|++..-++.+....+.-+.+...++.+     +...+..++|...+.++.+-.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p-----~f~p~amlgG~lW~~gN~~~v   73 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVVNLILGFP-----PFYPWAMLGGALWATGNILVV   73 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHHHHhcCCC-----cceeHHHhhhhhhhcCceeeh
Confidence            5678999999999999999984  566887777776666665555554444432     235667888999999999999


Q ss_pred             HHHhccchhhHHHHHhhHHHHHHHH-HHH-HhcCc-----CcHHHHHHHHHHHHhhhhhhccccccc----ccc-CCCcC
Q 015813          172 YSIQRLPLSQATVLSFTAPIMASIA-ARI-ILREK-----LKIAEIGGLALSFFGVLFIFRRILTTQ----AVS-GGLVK  239 (400)
Q Consensus       172 ~al~~~~~~~a~~l~~~~P~~~~ll-~~~-~l~e~-----~~~~~~~g~~l~~~Gv~l~~~~~~~~~----~~~-~~~~~  239 (400)
                      -.++.++.+....+.+..-+++--. +++ +++++     -.+...+|++++++|..+...-+....    ... .....
T Consensus        74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~  153 (254)
T PF07857_consen   74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSI  153 (254)
T ss_pred             hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCcccccccccccc
Confidence            9999999999999987755555444 443 45432     345678999999999887654322110    000 00000


Q ss_pred             C-Cc-c------ccccc------CCchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015813          240 P-GE-A------ISLNV------RGSDHMLAVLVGLFSSITGGISYCLIKAGA  278 (400)
Q Consensus       240 ~-~~-~------~~~~~------~~~~~~~G~l~~l~aa~~~a~~~v~~k~~~  278 (400)
                      + .+ .      ..++.      ....+..|..+++++++.|+...+=..+..
T Consensus       154 ~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~  206 (254)
T PF07857_consen  154 EDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQ  206 (254)
T ss_pred             ccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHH
Confidence            0 00 0      00000      112478899999999999999888666644

The region concerned is approximately 280 residues long.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.79  E-value=0.0048  Score=56.22  Aligned_cols=80  Identities=15%  Similarity=0.114  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcc
Q 015813          315 YSFLLMLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEK  394 (400)
Q Consensus       315 ~~~~~l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~  394 (400)
                      .+...+..=+++=.+...+.+.++++.+|+...++..+..+++.++.+++++++++..||++..+.+.|+.+........
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            34444444445557888999999999999999999999999999999999999999999999999999999988776544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.71  E-value=0.0068  Score=47.71  Aligned_cols=108  Identities=19%  Similarity=0.130  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 015813          262 FSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLARGLQLE  341 (400)
Q Consensus       262 ~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~al~~~  341 (400)
                      +-+++|++.+-+.|+..+..++.....  +.......              -...|-+++.. ++...+-..|++.+.+.
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~--~~~~~~~~--------------Ll~n~~y~ipf-~lNq~GSv~f~~~L~~~   65 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL--QLLQEIKF--------------LLLNPKYIIPF-LLNQSGSVLFFLLLGSA   65 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH--HHHHHHHH--------------HHHhHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence            457889999999999776444333321  11111100              11223333322 22477888899999999


Q ss_pred             CccchhhhH-hhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHH
Q 015813          342 KTSKVANVQ-YIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFY  386 (400)
Q Consensus       342 ~a~~~s~~~-~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~  386 (400)
                      +-+.+.++. .+.-+++++.++++.+|..+...++|+.+|+.|+.+
T Consensus        66 dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   66 DLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             CceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            999999885 799999999999888888888999999999999865

Many members are annotated as potential transmembrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.53  E-value=0.017  Score=50.81  Aligned_cols=136  Identities=13%  Similarity=0.017  Sum_probs=100.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHHhhCCCC------cCchhHHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMV-QSIPLFETVFMRCTVTLILSYLWLRRSGQPI------FGPMHARNLLVLRAL  161 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~------~~~~~~~~~~~~~~~  161 (400)
                      ...|-++.+++...=|+.......+-. -.-+..++.+...+-+.+.+..-....+.-+      .+.+..++.+.+.++
T Consensus       170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai  249 (337)
T KOG1580|consen  170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI  249 (337)
T ss_pred             cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH
Confidence            446788888888888888877665531 1223455666666666555443222222110      011345666777899


Q ss_pred             HHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          162 VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       162 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      ++++++.+.+.-+.+-++-..+++..+--+|+++.+.++++.+++.+||+|..+.+.|...=.
T Consensus       250 ~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  250 ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            999999999999999999999999999999999999999999999999999999999986644

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=96.38  E-value=0.036  Score=51.34  Aligned_cols=138  Identities=12%  Similarity=0.147  Sum_probs=110.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHhhCCC--------CcCchhHHHHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRRSGQP--------IFGPMHARNLLVLRA  160 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~--------~~~~~~~~~~~~~~~  160 (400)
                      ..|+.+++..+++-+...+..|+-. ..+.+-+.++++..+.+.+.+.......+..        .+.....+..+.+.+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            3489999999999999999999864 3567888999999999988877766444331        122234456788889


Q ss_pred             HHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       161 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      ++++.-.++-+++.+..|+..-++.-...-..+.+...++.+++.++..++|+.++++|-++=.+..
T Consensus       236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            9999999999999999999988888877777777777778889999999999999999987765544

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=95.69  E-value=0.075  Score=46.57  Aligned_cols=137  Identities=9%  Similarity=0.083  Sum_probs=108.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcC------chhHHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFG------PMHARNLLVLRAL  161 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~------~~~~~~~~~~~~~  161 (400)
                      .+.|++++...++.-+..-...|.-. ..+.--+...++..+++.++++.+-....++...      +.+...++++.|+
T Consensus       153 lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl  232 (309)
T COG5070         153 LNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL  232 (309)
T ss_pred             cCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH
Confidence            45688888888888887777777643 2456678899999999998888776544433222      2344567888899


Q ss_pred             HHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhc
Q 015813          162 VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (400)
Q Consensus       162 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~  225 (400)
                      +.+.-.+|--|.++-++.+.-+.+-.+.-.-..+.+.++++|+.+...+..+++++...++-..
T Consensus       233 ~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYav  296 (309)
T COG5070         233 CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV  296 (309)
T ss_pred             HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence            9988888999999999999999999998888999999999999999999999999876655443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.30  E-value=0.16  Score=47.83  Aligned_cols=142  Identities=11%  Similarity=0.071  Sum_probs=91.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHH-HHHHHHHHHHHHHHHh--hcCc----cCCCHHHHHHHHHHH
Q 015813          252 DHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVF-SFGILASPAAGICLFF--FEEF----VLPSFYSFLLMLVLS  324 (400)
Q Consensus       252 ~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~l~~~g  324 (400)
                      .-..|+++..+++++.+.+++=.||..+  = .+...+ .+.+++-++.......  ..++    ...+...+......|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--W-sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG--W-SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC--c-cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            3568999999999999999999998532  2 222222 2233332222221111  1111    122345566667788


Q ss_pred             HHHHHHHHHHHHHhcccCccchh-hhHhhHHHHHHHHHHHHhcc-------cCchhhhhhhHHHHHHHHHHHHcCCcccc
Q 015813          325 ILAFFAEVLLARGLQLEKTSKVA-NVQYIEVALTQLWGMGLSRI-------APSFGRLVGCVLILVSVFYTMYIGPEKEM  396 (400)
Q Consensus       325 v~~~~~~~~~~~al~~~~a~~~s-~~~~~~pv~a~i~~~l~l~e-------~~~~~~~~G~~li~~g~~~~~~~~~~~~~  396 (400)
                      ++-.++-..|-.++|+.+.+... +..-+..+++.++--++.++       +-....++|.++.++|+.+.-+....|++
T Consensus        81 ~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~  160 (344)
T PF06379_consen   81 VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK  160 (344)
T ss_pred             HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence            88889999999999999976554 44446677777776665443       22346799999999999998877655554

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.17  E-value=0.0063  Score=56.19  Aligned_cols=127  Identities=18%  Similarity=0.209  Sum_probs=95.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHH-H
Q 015813          250 GSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILA-F  328 (400)
Q Consensus       250 ~~~~~~G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~-~  328 (400)
                      +.++..|.++++.+++..+...++.|+..++...   ..              .-..++ ..+-..+  .+-+.|++. .
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~~--------------~ra~~g-g~~yl~~--~~Ww~G~ltm~   75 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---SG--------------LRAGEG-GYGYLKE--PLWWAGMLTMI   75 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh---hc--------------ccccCC-Ccchhhh--HHHHHHHHHHH
Confidence            3567789999999999999999998886653221   00              000011 1111122  223556666 7


Q ss_pred             HHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcccc
Q 015813          329 FAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEKEM  396 (400)
Q Consensus       329 ~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  396 (400)
                      ++....+.+....+++.++++..++.++..+++..+++|++++...+|+++.++|..+++...+++++
T Consensus        76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~  143 (335)
T KOG2922|consen   76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE  143 (335)
T ss_pred             HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence            88888889999999999999999999999999999999999999999999999999888776665544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.12  E-value=1.1  Score=42.37  Aligned_cols=137  Identities=13%  Similarity=0.057  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCC---CChHHHHHHHHHHHHHHHHHHHHhhc-----Ccc-C------CCHHHHHH
Q 015813          255 LAVLVGLFSSITGGISYCLIKAGANAS---DQPLVTVFSFGILASPAAGICLFFFE-----EFV-L------PSFYSFLL  319 (400)
Q Consensus       255 ~G~l~~l~aa~~~a~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~------~~~~~~~~  319 (400)
                      .=.+..+...+..+......|+..+++   -.+....+..=+.-+++.....+...     ++. .      .++.+..-
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            344444555556666666777655433   12333333333444444444333321     111 0      12212222


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcC
Q 015813          320 MLVLSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIG  391 (400)
Q Consensus       320 l~~~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~  391 (400)
                      +..=+++=.+-+-+++.++.+.+|+...+...+..+.+.++.+++++++++..||...++...|+.+++...
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            221122224555689999999999999999999999999999999999999999999999999999998443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.19  E-value=1.1  Score=40.77  Aligned_cols=137  Identities=12%  Similarity=0.155  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCc-------CchhHHHHHHHHHHH
Q 015813           91 SGLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRRSGQPIF-------GPMHARNLLVLRALV  162 (400)
Q Consensus        91 ~G~ll~l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  162 (400)
                      .|+.++-.+.++=+...-+....+ ...-+..+++++...++.++++......+.-..       .+.+.....++-++.
T Consensus       190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~  269 (367)
T KOG1582|consen  190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLA  269 (367)
T ss_pred             eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHH
Confidence            466655555555555444444443 234566888899888888877665554443211       112334455666666


Q ss_pred             HHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       163 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      +.++..+..--++.-++..++.++..---++.+++++++.++++-....+.++++.|+++=..++
T Consensus       270 gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  270 GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            66776666666677788899999999999999999999999999999999999999999988876

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=92.02  E-value=3.9  Score=38.01  Aligned_cols=135  Identities=17%  Similarity=0.192  Sum_probs=83.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHH-hhCCCCc---------CchhHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMVQ----SIPLFETVFMRCTVTLILSYLWLR-RSGQPIF---------GPMHARN  154 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~~----~~~~~~~~~~r~~~~~l~l~~~~~-~~~~~~~---------~~~~~~~  154 (400)
                      ...|..++..+.++-|+-..+.+.+..+    .-+|+...+.-.-...+.+++... .++....         .....++
T Consensus       162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r  241 (349)
T KOG1443|consen  162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR  241 (349)
T ss_pred             eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence            4568999999988888887777776511    124555555444433334444332 3332111         1111222


Q ss_pred             H---HHHHHHHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhh
Q 015813          155 L---LVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (400)
Q Consensus       155 ~---~~~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~  223 (400)
                      .   +.++|...+.--.+-+.-+.+++.-..++.--.-=+.+.+++..+.+|+++-..|.|..++..|+.+=
T Consensus       242 v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  242 VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            2   22233333333333355566777766666666667888899999999999999999999999999876

>PRK02237 hypothetical protein; Provisional

Probab=91.52  E-value=4.2  Score=31.55  Aligned_cols=47  Identities=9%  Similarity=-0.006  Sum_probs=37.7

Q ss_pred             hhhHHH-HHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhc
Q 015813          179 LSQATV-LSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (400)
Q Consensus       179 ~~~a~~-l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~  225 (400)
                      .+.+-. .-..+.+...+..+.+-|+||++.+++|..++++|+.++..
T Consensus        58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY  105 (109)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence            444433 34567777778899999999999999999999999988753

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=91.08  E-value=2.4  Score=32.55  Aligned_cols=110  Identities=12%  Similarity=0.062  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCC------HHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHH
Q 015813           96 MALSSTIYFFMQVISDVFMVQSIP------LFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFS  169 (400)
Q Consensus        96 ~l~a~~~~~~~~~~~k~~~~~~~~------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (400)
                      ++..++.||..+.++|... .+++      .-...++|-.....+                  .+.+.+--...-.+..+
T Consensus         8 lvaVgllWG~Tnplirrgs-~g~~~v~~~~~k~~~~lqe~~tl~l------------------~w~Y~iPFllNqcgSal   68 (125)
T KOG4831|consen    8 LVAVGLLWGATNPLIRRGS-LGWDKVKSSSRKIMIALQEMKTLFL------------------NWEYLIPFLLNQCGSAL   68 (125)
T ss_pred             HHHHHHHHccccHHHHHHH-hhHhhccCchHHHHHHHHHHHHHHH------------------hHHHHHHHHHHHhhHHH
Confidence            5667788999999999864 2221      122222222211110                  11111222233345677


Q ss_pred             HHHHHhccchhhHHHHH-hhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          170 FVYSIQRLPLSQATVLS-FTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       170 ~~~al~~~~~~~a~~l~-~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      ||.-+++.|.+.+..+. .+.-.|+.+.+..+-.|-...+.++|..+.++|+.+..
T Consensus        69 y~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   69 YYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            88889999999999985 46778888888775556667777999999999987653

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=91.04  E-value=0.3  Score=43.89  Aligned_cols=135  Identities=12%  Similarity=0.031  Sum_probs=88.7

Q ss_pred             cCcchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCc-hhH-HHHHHHHHHHH
Q 015813           86 NGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGP-MHA-RNLLVLRALVG  163 (400)
Q Consensus        86 ~~~~~~G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~  163 (400)
                      +.++.+|..++++.+.+++.+++.-..+. ++.|-.++...-.+++.++..+=....+.+...- +++ ....+...++.
T Consensus       161 gsnp~~GD~lvi~GATlYaVSNv~EEflv-kn~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~~~i~~yl~f~L~M  239 (336)
T KOG2766|consen  161 GSNPVKGDFLVIAGATLYAVSNVSEEFLV-KNADRVELMGFLGLFGAIISAIQFIFERHHVSTLHWDSAIFLYLRFALTM  239 (336)
T ss_pred             CCCCccCcEEEEecceeeeeccccHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhhhccceeeEeehHHHHHHHHHHHHH
Confidence            35678999999999999999999988875 8999999999999988888766544443332221 111 12222222222


Q ss_pred             HHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhh
Q 015813          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (400)
Q Consensus       164 ~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~  223 (400)
                      ++-+.+.-.-++..+++...+-.-++-++..++  ..++-+..|.-.++......|.++-
T Consensus       240 FllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiY  297 (336)
T KOG2766|consen  240 FLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIY  297 (336)
T ss_pred             HHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence            222333333445555554444444455565555  5678889999999999999998765

>PRK02237 hypothetical protein; Provisional

Probab=91.03  E-value=1.3  Score=34.24  Aligned_cols=46  Identities=24%  Similarity=0.270  Sum_probs=39.1

Q ss_pred             hhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          347 ANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       347 s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      +...-.-.+.+.++++.+-+++|+...++|..+.++|+.++.+.+|
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            4455566778889999999999999999999999999988876654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=90.52  E-value=0.087  Score=45.24  Aligned_cols=67  Identities=12%  Similarity=0.036  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCCcc
Q 015813          328 FFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGPEK  394 (400)
Q Consensus       328 ~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~~~  394 (400)
                      ..+.++|..++++.+|+.++.+.--+..|..+++++++++++....++...+.+.|++...+.++..
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            4567788899999999999999999999999999999999999999999999998887776655443

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=88.50  E-value=3  Score=32.22  Aligned_cols=53  Identities=11%  Similarity=0.070  Sum_probs=40.9

Q ss_pred             HhccchhhHHH-HHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          174 IQRLPLSQATV-LSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       174 l~~~~~~~a~~-l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      ++-.+.+.+-. .-....+...+-.+.+-|+||++.+++|..++++|+.++...
T Consensus        51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            44444444433 345677788888999999999999999999999999887653

; GO: 0016020 membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=87.30  E-value=1.2  Score=40.62  Aligned_cols=130  Identities=12%  Similarity=0.051  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015813          256 AVLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILAFFAEVLLA  335 (400)
Q Consensus       256 G~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~  335 (400)
                      |.+.+++|+++|+...+=.|+... .| .....+++.....+...+..... +....    +.+-..-|.+-..+..+-.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~-gD-g~~fQw~~~~~i~~~g~~v~~~~-~~p~f----~p~amlgG~lW~~gN~~~v   73 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT-GD-GFFFQWVMCSGIFLVGLVVNLIL-GFPPF----YPWAMLGGALWATGNILVV   73 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC-CC-cHHHHHHHHHHHHHHHHHHHHhc-CCCcc----eeHHHhhhhhhhcCceeeh
Confidence            567789999999999999998653 44 44545555444444444433332 22111    1111222233344555555


Q ss_pred             HHhcccCccchhhhHh-hHHHHHHHHHHH-HhcccC-----chhhhhhhHHHHHHHHHHHHcCC
Q 015813          336 RGLQLEKTSKVANVQY-IEVALTQLWGMG-LSRIAP-----SFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       336 ~al~~~~a~~~s~~~~-~~pv~a~i~~~l-~l~e~~-----~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      -.+|..+-+..-.+=. .+-+.+-..+.+ ++|+..     .+..++|++++++|..+....|.
T Consensus        74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~  137 (254)
T PF07857_consen   74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKS  137 (254)
T ss_pred             hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecC
Confidence            5556665544443333 455555555543 455432     46679999999999888776543

The region concerned is approximately 280 residues long.

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=87.06  E-value=1.9  Score=33.31  Aligned_cols=46  Identities=20%  Similarity=0.323  Sum_probs=39.2

Q ss_pred             hhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          347 ANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       347 s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      +...-.-.+.+.++++.+-+++|+...++|..+.+.|+.++.+.+|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            3445566778899999999999999999999999999998877654

; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=86.49  E-value=0.9  Score=41.48  Aligned_cols=68  Identities=10%  Similarity=0.126  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHhcccCccchhhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHc
Q 015813          323 LSILAFFAEVLLARGLQLEKTSKVANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYI  390 (400)
Q Consensus       323 ~gv~~~~~~~~~~~al~~~~a~~~s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~  390 (400)
                      =++|-..+-.+++.++....++-.-++.-...+|+.+++..+++.+++..||+|+..+.+|.+.+-..
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            34555888889999999999999999999999999999999999999999999999999998876544

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=85.66  E-value=8.7  Score=35.26  Aligned_cols=137  Identities=12%  Similarity=0.104  Sum_probs=88.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHH---------hhCCCCcC-c-hhHHHHHH
Q 015813           90 YSGLMCMALSSTIYFFMQVISDVFMV-QSIPLFETVFMRCTVTLILSYLWLR---------RSGQPIFG-P-MHARNLLV  157 (400)
Q Consensus        90 ~~G~ll~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~---------~~~~~~~~-~-~~~~~~~~  157 (400)
                      ..|+.+..++.+.-+.+.+.....+. .+-++-+.+|+.-++..++++....         ...++... . ........
T Consensus       163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~  242 (330)
T KOG1583|consen  163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW  242 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence            45888888888888888887766542 3568899999999888877665421         11110000 0 00011112


Q ss_pred             HHHHHHHHHHHHHHHHHh----ccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          158 LRALVGFLSLFSFVYSIQ----RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       158 ~~~~~~~~~~~~~~~al~----~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      .-.++.++.+++...+..    .++.-++++...+-=.+..+++.+.++.+.++.+|+|..+.++|.++....
T Consensus       243 ~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  243 VYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            223333444433333332    345555667777888999999999999999999999999999999876543

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=85.11  E-value=8  Score=29.73  Aligned_cols=41  Identities=12%  Similarity=-0.048  Sum_probs=34.1

Q ss_pred             HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhcc
Q 015813          186 SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (400)
Q Consensus       186 ~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~  226 (400)
                      -..+.+...+..+++-|.+|++.+++|..+|++|+.++...
T Consensus        65 GGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~  105 (109)
T COG1742          65 GGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG  105 (109)
T ss_pred             cchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence            34566667777888899999999999999999999877654

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=84.84  E-value=1.4  Score=33.77  Aligned_cols=61  Identities=20%  Similarity=0.216  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHhcccCccchhhhHh-hHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHH
Q 015813          327 AFFAEVLLARGLQLEKTSKVANVQY-IEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYT  387 (400)
Q Consensus       327 ~~~~~~~~~~al~~~~a~~~s~~~~-~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~  387 (400)
                      +-++-.+|+.-+++.+-+.+..+.+ +.-.|+.++|..+-.|...-..++|..++++|+.+.
T Consensus        62 NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   62 NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence            4566777888889999888887766 788899999988766667788899999999998764

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=84.50  E-value=9.6  Score=29.42  Aligned_cols=53  Identities=21%  Similarity=0.209  Sum_probs=37.2

Q ss_pred             HHHhccchhhHHHHHhh-HHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhh
Q 015813          172 YSIQRLPLSQATVLSFT-APIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (400)
Q Consensus       172 ~al~~~~~~~a~~l~~~-~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~  224 (400)
                      .|.+..++++--+++-. .-.+-..++.+++||+++|.++.|.++.+.+++++.
T Consensus        54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF  107 (108)
T PF04342_consen   54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF  107 (108)
T ss_pred             hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence            34445566666565432 233335567889999999999999999888887654

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=84.03  E-value=1.4  Score=40.07  Aligned_cols=137  Identities=12%  Similarity=0.063  Sum_probs=90.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHHhhCCC-------CcCchhHHHHHHHHH
Q 015813           89 RYSGLMCMALSSTIYFFMQVISDVFMVQ-SIPLFETVFMRCTVTLILSYLWLRRSGQP-------IFGPMHARNLLVLRA  160 (400)
Q Consensus        89 ~~~G~ll~l~a~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-------~~~~~~~~~~~~~~~  160 (400)
                      ...|.++.+.+.++-+...+..|..... +-.-..+.++....+.++++|.....+.-       +....+.|..+.++|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            3579999999999999999999975411 22346778888888988888887655431       222334456667777


Q ss_pred             HHHHHHHHHHHHHHhccchhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhc
Q 015813          161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (400)
Q Consensus       161 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~  225 (400)
                      ++++.-.+.-.+=++-+++-.-.+--..-..-=.+++..+++|..+...|-+-.+.+.|-..-.+
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            77765555444445544443222222222233356778889999999999998888888765443

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=81.78  E-value=3.3  Score=31.75  Aligned_cols=46  Identities=15%  Similarity=0.186  Sum_probs=38.0

Q ss_pred             hhhHhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          347 ANVQYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       347 s~~~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      +...-.-.+.+.++.+++-+.+|+...+.|..+.+.|..++.+.++
T Consensus        62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR  107 (109)
T COG1742          62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR  107 (109)
T ss_pred             HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence            4455567788899999999999999999999999999777666544

>TIGR02865 spore_II_E stage II sporulation protein E

Probab=81.42  E-value=43  Score=35.99  Aligned_cols=45  Identities=22%  Similarity=0.205  Sum_probs=32.3

Q ss_pred             hhhHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhh
Q 015813          179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (400)
Q Consensus       179 ~~~a~~l~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~  223 (400)
                      .+.+.++..+.|+-.+.++.....+|.+...+.+.+-.++|.+.+
T Consensus        10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~   54 (764)
T TIGR02865        10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI   54 (764)
T ss_pred             HhHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence            356778888999999999888877776555555655566666544

Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=80.44  E-value=3.7  Score=31.06  Aligned_cols=32  Identities=28%  Similarity=0.322  Sum_probs=28.4

Q ss_pred             HHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhc
Q 015813          194 SIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (400)
Q Consensus       194 ~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~  225 (400)
                      +.++.+.+||+++|.++.+.++...|+.++.+
T Consensus        84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr  115 (116)
T COG3169          84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR  115 (116)
T ss_pred             HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence            45788999999999999999999999988764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	400
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.93
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.91
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.89
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.7

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.93  E-value=2.7e-08  Score=77.82  Aligned_cols=102  Identities=14%  Similarity=0.094  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcCchhHHHHHHHHHHHHHHHHHHHH
Q 015813           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (400)
Q Consensus        92 G~ll~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (400)
                      ..++.+++.++-...+...|..  ++..                               + .+..+...++...++.++.
T Consensus         3 ~~l~l~~a~~~e~~~~~~lK~s--~~~~-------------------------------~-~~~~~~~~~~~~~~~~~~~   48 (110)
T 3b5d_A            3 PYIYLGGAILAEVIGTTLMKFS--EGFT-------------------------------R-LWPSVGTIICYCASFWLLA   48 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc--cCcc-------------------------------h-HHHHHHHHHHHHHHHHHHH
Confidence            3566777777777777787762  2210                               1 1233566777889999999


Q ss_pred             HHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          172 YSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       172 ~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      +++++.|.+.+..+ ..+.|+++.+++++++||++++.|++|++++++|++++...+
T Consensus        49 ~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999998 799999999999999999999999999999999999987543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.91  E-value=3.4e-09  Score=85.90  Aligned_cols=72  Identities=19%  Similarity=0.196  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhhhhhccc
Q 015813          156 LVLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (400)
Q Consensus       156 ~~~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~ll~~~~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  227 (400)
                      .+++.++..++++++.+++++.|++.+..+ .++.|+++.+++++++||++++.+++|++++++|++++...+
T Consensus        33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            356678888999999999999999999999 899999999999999999999999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.89  E-value=3.9e-09  Score=85.59  Aligned_cols=70  Identities=19%  Similarity=0.199  Sum_probs=52.4

Q ss_pred             HHHHH-HHHHHHHHHHhcccCccchhhh-HhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcCC
Q 015813          323 LSILA-FFAEVLLARGLQLEKTSKVANV-QYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIGP  392 (400)
Q Consensus       323 ~gv~~-~~~~~~~~~al~~~~a~~~s~~-~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~~  392 (400)
                      +++++ +++|+++++++++.+++++..+ .++.|+++.++++++++|++++.+++|+++|++|++++...++
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            44444 8999999999999999999998 8999999999999999999999999999999999999987553

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.70  E-value=2.7e-07  Score=72.09  Aligned_cols=100  Identities=17%  Similarity=0.113  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHhhcCccCCCHHHHHHHHHHHHHH-HHHHHHHH
Q 015813          257 VLVGLFSSITGGISYCLIKAGANASDQPLVTVFSFGILASPAAGICLFFFEEFVLPSFYSFLLMLVLSILA-FFAEVLLA  335 (400)
Q Consensus       257 ~l~~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~-~~~~~~~~  335 (400)
                      .++.+++.++-+..+...|+. +  + .                         .    ..|..  ..++++ .+++.++.
T Consensus         4 ~l~l~~a~~~e~~~~~~lK~s-~--~-~-------------------------~----~~~~~--~~~~~~~~~~~~~~~   48 (110)
T 3b5d_A            4 YIYLGGAILAEVIGTTLMKFS-E--G-F-------------------------T----RLWPS--VGTIICYCASFWLLA   48 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-c--C-c-------------------------c----hHHHH--HHHHHHHHHHHHHHH
Confidence            456677788888888887762 1  1 0                         0    11222  244444 88999999


Q ss_pred             HHhcccCccchhhh-HhhHHHHHHHHHHHHhcccCchhhhhhhHHHHHHHHHHHHcC
Q 015813          336 RGLQLEKTSKVANV-QYIEVALTQLWGMGLSRIAPSFGRLVGCVLILVSVFYTMYIG  391 (400)
Q Consensus       336 ~al~~~~a~~~s~~-~~~~pv~a~i~~~l~l~e~~~~~~~~G~~li~~g~~~~~~~~  391 (400)
                      +++|+.+.+++..+ ..+.|+++.+++++++||++++.+++|+.+|+.|++.+...+
T Consensus        49 ~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999888 799999999999999999999999999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00