Citrus Sinensis ID: 015836

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
MAELKERLLPPKPASAINLRDSSFRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAAGVNEVWQSEGDTNRRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSISAPVSPVSSPPDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAACSF
cccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEHHHHHHHcccccccccccccccccccEEcccccEEEEEccccEEEEEcccEEEEccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccHHHHHHHHHHHHHHccccc
ccHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEccHHHHHHHccccHHHHHHccccccccccEEccccEEEEEHHHEEEEEEccEEEEEccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHccccccccccccccccccccccccHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHccc
maelkerllppkpasainlrdssfrpsasgrqpfqgvdVLGLKKRGQGLRSWIRVdvsgnsqiievdkfsmmrrcdlpardlrlldplfvypstilgREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAAGVNEvwqsegdtnrrrsrnfdnvfgntspdylpfEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRmeasfygdqsvlgyrsndiqsisapvspvssppdtrkLEKSLSIARSrhesmrssdsttDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFsidnklcffspvlALKFEFRLVACYAACSF
maelkerllppkpasainlrdssfrpsasgrqpfqgvdvlGLKKRgqglrswirvdvsgnsqiievdkfsmmRRCDLpardlrlldpLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTaagvnevwqsegdtnrrrsrnfDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSkistlnlervrrlksrlvaltrrvqkvrdeieqlmdddgdMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSIsapvspvssppdtrKLEKSLSiarsrhesmrssdsttdSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAACSF
MAELKERLLPPKPASAINLRDSSFRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDVSGNSQIIEVDKFSMMrrcdlpardlrlldplFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAAGVNEVWQSEGDTNRRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSIsapvspvssppDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAACSF
***********************************GVDVLGLKKRGQGLRSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAAGVNEVWQ************FDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVR****************************************************************************************LEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAAC**
*************************************************RSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVE**************************************YLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYG***VL*************************************************VEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAACSF
MAELKERLLPPKPASAINLRDSSFRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAAGVNE*********RRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSI***************************************VEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAACSF
************************************VDVL*****GQGLRSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTA******************************DYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRME*********************************************************DSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAACSF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAELKERLLPPKPASAINLRDSSFRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAAGVNEVWQSEGDTNRRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERxxxxxxxxxxxxxxxxxxxxxxxxxxxxDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSISAPVSPVSSPPDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFFSIDNKLCFFSPVLALKFEFRLVACYAACSF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query399 2.2.26 [Sep-21-2011]
Q9SAH0443 Magnesium transporter MRS yes no 0.914 0.823 0.841 1e-176
Q9S9N4442 Magnesium transporter MRS no no 0.912 0.823 0.852 1e-175
Q67UQ7436 Magnesium transporter MRS yes no 0.781 0.715 0.750 1e-136
A2YFN7436 Magnesium transporter MRS N/A no 0.781 0.715 0.750 1e-136
Q0JBZ6428 Magnesium transporter MRS no no 0.754 0.703 0.661 1e-110
A2XV81428 Magnesium transporter MRS N/A no 0.754 0.703 0.661 1e-110
Q9ZPR4421 Magnesium transporter MRS no no 0.894 0.847 0.520 5e-90
Q304A0386 Magnesium transporter MRS no no 0.726 0.751 0.517 6e-74
Q9LJN2484 Magnesium transporter MRS no no 0.776 0.640 0.473 2e-73
Q8L4S2444 Magnesium transporter MRS no no 0.721 0.648 0.469 3e-71
>sp|Q9SAH0|MRS2A_ARATH Magnesium transporter MRS2-10 OS=Arabidopsis thaliana GN=MRS2-10 PE=2 SV=1 Back     alignment and function desciption
 Score =  619 bits (1595), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 309/367 (84%), Positives = 336/367 (91%), Gaps = 2/367 (0%)

Query: 1   MAELKERLLPPKPASAINLR-DSSFRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDVSG 59
           M+ELKERLLPP+PASAINLR D+  RPS SGRQP  GVDVLGLKKRGQGL+SWIRVD S 
Sbjct: 1   MSELKERLLPPRPASAINLRGDAGSRPSPSGRQPLLGVDVLGLKKRGQGLKSWIRVDTSA 60

Query: 60  NSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVL 119
           NSQ+IEVDKF+MMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVL
Sbjct: 61  NSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVL 120

Query: 120 LLNSLDSYVLQYVVELQRRLTAAGVNEVWQSEG-DTNRRRSRNFDNVFGNTSPDYLPFEF 178
           LLNSLD+YVL+YVVELQ+RL A+ V EVW  +  + +RRRSR+ DNV  N+SPDYLPFEF
Sbjct: 121 LLNSLDNYVLRYVVELQQRLKASSVTEVWNQDSLELSRRRSRSLDNVLQNSSPDYLPFEF 180

Query: 179 RALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQK 238
           RALEVALEAACTFLDSQA+ELEIEAYPLLDELTSKISTLNLER RRLKSRLVALTRRVQK
Sbjct: 181 RALEVALEAACTFLDSQASELEIEAYPLLDELTSKISTLNLERARRLKSRLVALTRRVQK 240

Query: 239 VRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSISAPVSPVSSPPD 298
           VRDEIEQLMDDDGDMAEMYLTEKK RME S YGDQS+  YR+ND  S+SAPVSPVSSPP+
Sbjct: 241 VRDEIEQLMDDDGDMAEMYLTEKKKRMEGSLYGDQSLPVYRTNDCFSLSAPVSPVSSPPE 300

Query: 299 TRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE 358
           +R+LEKSLSI RSRH+S RSS+  T+++EELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE
Sbjct: 301 SRRLEKSLSIVRSRHDSARSSEDATENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE 360

Query: 359 DFINIQL 365
           DFINIQL
Sbjct: 361 DFINIQL 367
High-affinity magnesium transporter that mediates the influx of magnesium. Involved in tolerance to Aluminum.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9S9N4|MRS21_ARATH Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1 Back     alignment and function description
>sp|Q67UQ7|MRS2B_ORYSJ Magnesium transporter MRS2-B OS=Oryza sativa subsp. japonica GN=MRS2-B PE=2 SV=1 Back     alignment and function description
>sp|A2YFN7|MRS2B_ORYSI Magnesium transporter MRS2-B OS=Oryza sativa subsp. indica GN=MRS2-B PE=3 SV=1 Back     alignment and function description
>sp|Q0JBZ6|MRS2C_ORYSJ Magnesium transporter MRS2-C OS=Oryza sativa subsp. japonica GN=MRS2-C PE=3 SV=3 Back     alignment and function description
>sp|A2XV81|MRS2C_ORYSI Magnesium transporter MRS2-C OS=Oryza sativa subsp. indica GN=H0311C03.3 PE=3 SV=2 Back     alignment and function description
>sp|Q9ZPR4|MRS25_ARATH Magnesium transporter MRS2-5 OS=Arabidopsis thaliana GN=MRS2-5 PE=1 SV=1 Back     alignment and function description
>sp|Q304A0|MRS27_ARATH Magnesium transporter MRS2-7 OS=Arabidopsis thaliana GN=MRS2-7 PE=2 SV=1 Back     alignment and function description
>sp|Q9LJN2|MRS23_ARATH Magnesium transporter MRS2-3 OS=Arabidopsis thaliana GN=MRS2-3 PE=1 SV=1 Back     alignment and function description
>sp|Q8L4S2|MRS2F_ORYSJ Magnesium transporter MRS2-F OS=Oryza sativa subsp. japonica GN=MRS2-F PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
255543347447 RNA splicing protein mrs2, mitochondrial 0.914 0.816 0.900 0.0
224075714443 magnesium transporter [Populus trichocar 0.914 0.823 0.907 0.0
224115768443 magnesium transporter [Populus trichocar 0.914 0.823 0.923 0.0
356556780443 PREDICTED: magnesium transporter MRS2-1- 0.914 0.823 0.899 0.0
356550671443 PREDICTED: magnesium transporter MRS2-1- 0.914 0.823 0.893 0.0
449497201447 PREDICTED: magnesium transporter MRS2-1- 0.914 0.816 0.897 0.0
449439761447 PREDICTED: magnesium transporter MRS2-1- 0.914 0.816 0.897 0.0
225443146444 PREDICTED: magnesium transporter MRS2-1- 0.914 0.822 0.872 0.0
297850020443 hypothetical protein ARALYDRAFT_471800 [ 0.914 0.823 0.852 1e-179
147777338 559 hypothetical protein VITISV_001335 [Viti 0.914 0.652 0.782 1e-176
>gi|255543347|ref|XP_002512736.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis] gi|223547747|gb|EEF49239.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/371 (90%), Positives = 355/371 (95%), Gaps = 6/371 (1%)

Query: 1   MAELKERLLPPKPASAINLRDSSFRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDVSGN 60
           MA+LKERLLPPKPASAINLRD+S+R SASGRQPFQG+DVLGLKKRGQGLRSWIRVD+SGN
Sbjct: 1   MADLKERLLPPKPASAINLRDASYRASASGRQPFQGIDVLGLKKRGQGLRSWIRVDLSGN 60

Query: 61  SQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLL 120
           SQ+IEVDKF+MMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLL
Sbjct: 61  SQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLL 120

Query: 121 LNSLDSYVLQYVVELQRRLTAAGVNEVWQSEG-DTNRRRS----RNFDNVFGNTSPDYLP 175
           LNSLDSYVLQYVVELQRRLTA GV EVWQSEG + NRRRS    RNFDNVFGN SPDYLP
Sbjct: 121 LNSLDSYVLQYVVELQRRLTAPGVGEVWQSEGPELNRRRSRNFDRNFDNVFGNPSPDYLP 180

Query: 176 FEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRR 235
           FEFRALEVALEAACTFLDSQ +ELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRR
Sbjct: 181 FEFRALEVALEAACTFLDSQVSELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRR 240

Query: 236 VQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQ-SISAPVSPVS 294
           VQKVRDEIEQLMDDDGDMAEMYLTEKK RME+SFYGDQS++G+RSND   S+SAPVSPVS
Sbjct: 241 VQKVRDEIEQLMDDDGDMAEMYLTEKKGRMESSFYGDQSLMGFRSNDGGISLSAPVSPVS 300

Query: 295 SPPDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYI 354
           SPPD+R+LEKSLSIARSRHESM+SS+S T+S+E+LEMLLEAYFVVIDSTLNKLTSLKEYI
Sbjct: 301 SPPDSRRLEKSLSIARSRHESMKSSESATESIEQLEMLLEAYFVVIDSTLNKLTSLKEYI 360

Query: 355 DDTEDFINIQL 365
           DDTEDFINIQL
Sbjct: 361 DDTEDFINIQL 371

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224075714|ref|XP_002304732.1| magnesium transporter [Populus trichocarpa] gi|222842164|gb|EEE79711.1| magnesium transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224115768|ref|XP_002332052.1| magnesium transporter [Populus trichocarpa] gi|222831938|gb|EEE70415.1| magnesium transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356556780|ref|XP_003546700.1| PREDICTED: magnesium transporter MRS2-1-like [Glycine max] Back     alignment and taxonomy information
>gi|356550671|ref|XP_003543708.1| PREDICTED: magnesium transporter MRS2-1-like [Glycine max] Back     alignment and taxonomy information
>gi|449497201|ref|XP_004160340.1| PREDICTED: magnesium transporter MRS2-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449439761|ref|XP_004137654.1| PREDICTED: magnesium transporter MRS2-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225443146|ref|XP_002263392.1| PREDICTED: magnesium transporter MRS2-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297850020|ref|XP_002892891.1| hypothetical protein ARALYDRAFT_471800 [Arabidopsis lyrata subsp. lyrata] gi|297338733|gb|EFH69150.1| hypothetical protein ARALYDRAFT_471800 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|147777338|emb|CAN71705.1| hypothetical protein VITISV_001335 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
TAIR|locus:2200542442 MGT2 "magnesium transporter 2" 0.947 0.855 0.755 3.3e-143
TAIR|locus:2025767443 MGT1 "magnesium transporter 1" 0.949 0.855 0.744 7e-141
TAIR|locus:2044254421 MGT3 "magnesium transporter 3" 0.556 0.527 0.517 6.6e-77
TAIR|locus:2091176484 MGT4 "magnesium transporter 4" 0.300 0.247 0.590 3.3e-66
TAIR|locus:2174799394 MGT9 "magnesium transporter 9" 0.541 0.548 0.502 1.1e-64
TAIR|locus:2077665436 MGT6 "magnesium transporter 6" 0.761 0.697 0.425 4.8e-55
TAIR|locus:2139905408 MGT5 "AT4G28580" [Arabidopsis 0.593 0.580 0.373 2e-43
TAIR|locus:2144746294 AT5G09720 [Arabidopsis thalian 0.641 0.870 0.395 2.6e-40
UNIPROTKB|Q6C8H7455 LPE10 "Mitochondrial inner mem 0.240 0.210 0.322 1.6e-11
POMBASE|SPBC25H2.08c422 mrs2 "magnesium ion transporte 0.213 0.201 0.354 2.2e-11
TAIR|locus:2200542 MGT2 "magnesium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1400 (497.9 bits), Expect = 3.3e-143, P = 3.3e-143
 Identities = 290/384 (75%), Positives = 322/384 (83%)

Query:     1 MAELKERLLPPKPASAINLRDSSF-RPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDVSG 59
             M+ELKERLLPP+PASA+NLRD+S  RPSASGR P  GVDVLGLKKRGQGLRSWIRVD SG
Sbjct:     1 MSELKERLLPPRPASAMNLRDASVTRPSASGRPPLLGVDVLGLKKRGQGLRSWIRVDTSG 60

Query:    60 NSQIIEVDKFSMMXXXXXXXXXXXXXXXXFVYPSTILGREKAIVVNLEQIRCIITADEVL 119
             N+Q++EVDKF+MM                FVYPSTILGREKAIVVNLEQIRCIITADEVL
Sbjct:    61 NTQVMEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVL 120

Query:   120 LLNSLDSYVLQYVVELQRRLTAAGVNEVWQSEGDT-NRRRSRNFDNVFGNTSPDYLPFEF 178
             LLNSLD+YVL+YVVELQ+RL  + V E+WQ E    +RRRSR+FDN F N+SPDYLPFEF
Sbjct:   121 LLNSLDNYVLRYVVELQQRLKTSSVGEMWQQENSQLSRRRSRSFDNAFENSSPDYLPFEF 180

Query:   179 RALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQK 238
             RALE+ALEAACTFLDSQA+ELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQK
Sbjct:   181 RALEIALEAACTFLDSQASELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQK 240

Query:   239 VRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSIXXXXXXXXXXXD 298
             VRDEIEQLMDDDGDMAEMYLTEKK RME S YGDQS+LGYRSND  S+           D
Sbjct:   241 VRDEIEQLMDDDGDMAEMYLTEKKRRMEGSMYGDQSLLGYRSNDGLSVSAPVSPVSSPPD 300

Query:   299 TRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE 358
             +R+L+KSLSIARSRH+S RSS+   +++EELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE
Sbjct:   301 SRRLDKSLSIARSRHDSARSSEGA-ENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE 359

Query:   359 DFINIQLVCFFSIDNKLCFFSPVL 382
             DFINIQL    ++ N+L  F  +L
Sbjct:   360 DFINIQLD---NVRNQLIQFELLL 380
GO:0005886 "plasma membrane" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0030001 "metal ion transport" evidence=IEA;ISS
GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA
TAIR|locus:2025767 MGT1 "magnesium transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044254 MGT3 "magnesium transporter 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091176 MGT4 "magnesium transporter 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174799 MGT9 "magnesium transporter 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077665 MGT6 "magnesium transporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139905 MGT5 "AT4G28580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144746 AT5G09720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6C8H7 LPE10 "Mitochondrial inner membrane magnesium transporter LPE10" [Yarrowia lipolytica CLIB122 (taxid:284591)] Back     alignment and assigned GO terms
POMBASE|SPBC25H2.08c mrs2 "magnesium ion transporter Mrs2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9S9N4MRS21_ARATHNo assigned EC number0.85280.91220.8235nono
Q67UQ7MRS2B_ORYSJNo assigned EC number0.75070.78190.7155yesno
Q9SAH0MRS2A_ARATHNo assigned EC number0.84190.91470.8239yesno
A2YFN7MRS2B_ORYSINo assigned EC number0.75070.78190.7155N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00031528
magnesium transporter (444 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
cd12823323 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae 8e-91
>gnl|CDD|213357 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae inner mitochondrial membrane Mg2+ transporters Mfm1p and Mrs2p-like family Back     alignment and domain information 
 Score =  276 bits (708), Expect = 8e-91
 Identities = 137/318 (43%), Positives = 170/318 (53%), Gaps = 72/318 (22%)

Query: 52  WIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFV-YPSTILGREKAIVVNLEQIR 110
           W  +D +GN+ ++E+DK  ++R   L  RDLRLLDP    YP +IL RE AI+VNLE IR
Sbjct: 1   WTVIDSTGNATVVELDKSELLRELGLQPRDLRLLDPTLTSYPPSILVRENAILVNLEHIR 60

Query: 111 CIITADEVLLLNSLDS---YVLQYVVELQRRLTAAGVNEVWQSEGDTNRRRSRNFDNVFG 167
            IITADEVLL +   S    V  ++ ELQRRL ++  +E                     
Sbjct: 61  AIITADEVLLFDPDGSSSALVSAFLEELQRRLASSNGSE-------------------SE 101

Query: 168 NTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKS 227
           +   D LPFEFRALE ALE  C+ L+++   LE EA PLLDELT KIST NLER+  LK 
Sbjct: 102 SGGEDSLPFEFRALEAALEEVCSHLEAELKRLEPEALPLLDELTDKISTSNLERLLPLKR 161

Query: 228 RLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSNDIQSIS 287
           RLV L  RVQKVRD +E+L+DDD DMA+MYLT+K +  E                     
Sbjct: 162 RLVELETRVQKVRDALEELLDDDEDMADMYLTDKAAGPERL------------------- 202

Query: 288 APVSPVSSPPDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKL 347
                                          S    D  EE+EMLLEAY   +D  LNKL
Sbjct: 203 ------------------------------ESSRKEDDHEEVEMLLEAYLQQVDELLNKL 232

Query: 348 TSLKEYIDDTEDFINIQL 365
             L+EYIDDTE+ IN+ L
Sbjct: 233 EELREYIDDTEELINLIL 250

A eukaryotic subfamily belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This functionally diverse subfamily includes the inner mitochondrial membrane Mg2+ transporters Saccharomyces cerevisiae Mfm1p/Lpe10p, Mrs2p, and human MRS2/ MRS2L. It also includes a family of Arabidopsis thaliana proteins (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of two EcCorA_ZntB-like family transporters: Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, as in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport. Length = 323

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 399
KOG2662414 consensus Magnesium transporters: CorA family [Ino 100.0
PF01544292 CorA: CorA-like Mg2+ transporter protein; InterPro 97.69
TIGR00383318 corA magnesium Mg(2+) and cobalt Co(2+) transport 96.33
COG0598322 CorA Mg2+ and Co2+ transporters [Inorganic ion tra 94.66
PRK09546324 zntB zinc transporter; Reviewed 92.26
>KOG2662 consensus Magnesium transporters: CorA family [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-86  Score=659.81  Aligned_cols=311  Identities=61%  Similarity=0.853  Sum_probs=266.1

Q ss_pred             cccccCCCcceEEEECCCCCeEEEEeehhhhhhhcCCCCCcccCcCCCCCCCceeeecCCeeEeecccceeeeecCeeEe
Q 015836           41 GLKKRGQGLRSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLL  120 (399)
Q Consensus        41 ~~~~~~~~~r~w~~~D~~G~~~~~e~~K~~l~~~~gL~~RDLR~LDp~~~~PssIl~R~~aIlvnLe~IrAIIt~d~VLL  120 (399)
                      +.+|+++|+|+|++||++|+++..+++|++||+++||+|||||++||+++||++|++|++|||+||||||||||+|+|+|
T Consensus        56 ~~~~~~~~~~sw~~~D~tGn~~~~e~dK~~i~~r~~L~aRDLR~ldp~~~~~ssIl~RE~aIVlNLe~IKAIItaeeVll  135 (414)
T KOG2662|consen   56 VSKKSGSGSRSWTRFDATGNSTVLEVDKYTIMKRVGLPARDLRKLDPSLSYPSSILGRENAIVLNLEHIKAIITADEVLL  135 (414)
T ss_pred             cccccCCcceEEEEEcCCCCeeeccccHHHHHHHcCCChhhhhhccccccCccccccccceEEeehhhhheeeehhheeE
Confidence            55677999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCChhHHHHHHHHHHhhcccCCCCcccccCCccccccCCcCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 015836          121 LNSLDSYVLQYVVELQRRLTAAGVNEVWQSEGDTNRRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELE  200 (399)
Q Consensus       121 fd~~~~~v~~fl~~L~~rL~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~LPFEfrALEa~L~~v~s~Le~e~~~Le  200 (399)
                      ||+.++ |.++..+++++|.....+...|-.++              ...++.+||||||||+||+++|++|++++.+||
T Consensus       136 ~d~~~~-v~~~~~el~~~l~~~~~~~~~q~s~~--------------~~~~~~lPFEFrALE~aLe~~~s~L~~~~~~Le  200 (414)
T KOG2662|consen  136 LDSLDP-VIPYNEELQRRLPVELESRGNQLSSD--------------GGSKDELPFEFRALEVALEAACSFLDSRLSELE  200 (414)
T ss_pred             eccccc-cchHHHHHHHHhcccccccccccCCC--------------CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988 99999999999987643321111111              012468999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccChhhHHHHHHHhhhHHHHHHHHHHHHHHHHHhhCCHHHHhhcccccccccccccccCccccccccC
Q 015836          201 IEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRS  280 (399)
Q Consensus       201 ~~~~~~Ld~L~~~Is~~~LerLr~lK~rL~~l~~rvq~VRd~LeelLddDeDMa~MyLT~k~~~~~~~~~~~~~~~~~~~  280 (399)
                      +.++++||+|+++|++.||++||.+|++|++|.+|||+|||+|+|+||||+|||+||||+|+.+.+              
T Consensus       201 ~~~~~~LdeLt~~is~~nL~~lr~~k~~Lt~l~~rvqkvRDeLe~LLddd~Dma~mYLT~K~~~~~--------------  266 (414)
T KOG2662|consen  201 TEAYPLLDELTNKISTLNLERLRILKKRLTELTSRVQKVRDELEELLDDDDDMAEMYLTRKLAQAS--------------  266 (414)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhHHhhhcc--------------
Confidence            999999999999999999999999999999999999999999999999999999999999997632              


Q ss_pred             CCccccCCCCCCCCCCCchhhhhhhhhhhhhccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh
Q 015836          281 NDIQSISAPVSPVSSPPDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDF  360 (399)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~eElEmLLEaYf~qiD~~~~~l~~L~e~IddTEd~  360 (399)
                         .+.++|++|+.....++.        ++...+  +.-...+|+||+||||||||+|||+++||+++|+|||||||||
T Consensus       267 ---~~~~~~~sp~~~~~~~r~--------~~~~~~--s~~~~~dd~eElEMLLEaYf~qiD~~~nk~~~Lre~IddTEd~  333 (414)
T KOG2662|consen  267 ---SPESAPTSPTIKAGISRA--------KSNRAS--STVRGEDDVEELEMLLEAYFMQIDSTLNKLESLREYIDDTEDI  333 (414)
T ss_pred             ---ccccCCCCccccCCccch--------hhcccc--hhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence               133455555543322211        000000  0001278999999999999999999999999999999999999


Q ss_pred             hHHhcccCcccccchhcccccccee-eeeehhhhhcc
Q 015836          361 INIQLVCFFSIDNKLCFFSPVLALK-FEFRLVACYAA  396 (399)
Q Consensus       361 InI~LD~~~~~RN~Li~~el~Lsl~-~~~~~~~~~~~  396 (399)
                      |||+||+   +||+||||+|+|+++ |++++.+..||
T Consensus       334 InI~LDs---~RN~LiqleL~Lt~gT~~~s~~~~va~  367 (414)
T KOG2662|consen  334 INIQLDS---NRNELIQLELLLTIGTFCLSVFSVVAG  367 (414)
T ss_pred             HHHHhcc---chhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999   999999999999995 66665555443

>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ] Back     alignment and domain information
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) Back     alignment and domain information
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09546 zntB zinc transporter; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
3rkg_A261 Structural And Functional Characterization Of The Y 4e-04
>pdb|3RKG|A Chain A, Structural And Functional Characterization Of The Yeast Mg2+ Channel Mrs2 Length = 261 Back     alignment and structure 
Iteration: 1

 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 35/176 (19%)
Query: 94  TILGREKAIVVNLEQIRCIITADEVLLLNSLDSY------VLQYVVELQRRLTAAGVNEV 147
           TI+ +   IV+NL  I+ +I  D+V + ++ +        VL Y  +L+ +L++   N  
Sbjct: 64  TIMCKPNCIVINLLHIKALIERDKVYVFDTTNPSAAAKLSVLMY--DLESKLSSTKNNSQ 121
Query: 148 WQSEGDTNRRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLL 207
           +           R  +++F N           ALE   +     L SQ          +L
Sbjct: 122 FYEH--------RALESIFINV--------MSALETDFK-----LHSQIC------IQIL 154
Query: 208 DELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKS 263
           ++L ++++ L L  +      L    ++   +RD +++L+++D D+A MYLT KKS
Sbjct: 155 NDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKS 210

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
3rkg_A261 Magnesium transporter MRS2, mitochondrial; matrix 6e-52
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Length = 261 Back     alignment and structure
 Score =  173 bits (439), Expect = 6e-52
 Identities = 57/327 (17%), Positives = 107/327 (32%), Gaps = 84/327 (25%)

Query: 42  LKKRGQGLRSWIRVDVSGNSQII--EVDKFSMMRRCDLPARDLRLLD-PLFVYPSTILGR 98
           +        S    +  GN   +  +  K+S +    L  RDLR +D        TI+ +
Sbjct: 9   ISASDSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCK 68

Query: 99  EKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAAGVNEVWQSEGDTNRRR 158
              IV+NL  I+ +I  D+V + ++ +      +  L                       
Sbjct: 69  PNCIVINLLHIKALIERDKVYVFDTTNPSAAAKLSVLMYD-------------------- 108

Query: 159 SRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLN 218
               ++   +T  +   +E RALE       + L++           +L++L ++++ L 
Sbjct: 109 ---LESKLSSTKNNSQFYEHRALESIFINVMSALETDFKLHSQICIQILNDLENEVNRLK 165

Query: 219 LERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGY 278
           L  +      L    ++   +RD +++L+++D D+A MYLT KKS  +     +  +  Y
Sbjct: 166 LRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKSPKDNFSDLEMLIETY 225

Query: 279 RSNDIQSISAPVSPVSSPPDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFV 338
                                                    D      E           
Sbjct: 226 -------------------------------------YTQCDEYVQQSES---------- 238

Query: 339 VIDSTLNKLTSLKEYIDDTEDFINIQL 365
                      L + I  TE+ +NI L
Sbjct: 239 -----------LIQDIKSTEEIVNIIL 254
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
3rkg_A261 Magnesium transporter MRS2, mitochondrial; matrix 100.0
4ev6_A339 Magnesium transport protein CORA; membrane protein 96.51
2iub_A363 CORA, divalent cation transport-related protein; m 96.24
4egw_A280 Magnesium transport protein CORA; magnesium transp 96.14
3nvo_A264 Zinc transport protein ZNTB; alpha-beta-alpha sand 94.95
3ck6_A252 Putative membrane transport protein; APC91421.1, Z 93.28
3swf_A74 CGMP-gated cation channel alpha-1; coiled-coil, as 85.71
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=1.2e-71  Score=536.11  Aligned_cols=239  Identities=27%  Similarity=0.408  Sum_probs=220.7

Q ss_pred             cceEEEECCCCCeEEEE--eehhhhhhhcCCCCCcccCcCCCC-CCCceeeecCCeeEeecccceeeeecCeeEeecCCC
Q 015836           49 LRSWIRVDVSGNSQIIE--VDKFSMMRRCDLPARDLRLLDPLF-VYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLD  125 (399)
Q Consensus        49 ~r~w~~~D~~G~~~~~e--~~K~~l~~~~gL~~RDLR~LDp~~-~~PssIl~R~~aIlvnLe~IrAIIt~d~VLLfd~~~  125 (399)
                      .-+|++||++|+++.++  ++|++||+++||+|||||+|||++ +++|+|++|++||||||+|||||||+|+|||||+.+
T Consensus        16 ~~~ct~fD~~G~~~~~~~~~~K~~l~~~~~L~~RDLR~ld~~~~~~~PsIl~R~~aIlvnL~~irAII~~d~Vllfd~~~   95 (261)
T 3rkg_A           16 FISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFDTTN   95 (261)
T ss_dssp             EEEEEEECTTSCEEEEEEEEEHHHHHHHTTCCGGGGGGTSSCCSSCCCEEEECSSCEEEEETTEEEEECSSCEEEECCSC
T ss_pred             eEEEEEECCCCCEEEecccccHHHHHHHcCCChhhHHHhcccccCCCceEEecCCeEEEechhceEEEEcceEEEEcCCC
Confidence            56899999999999876  999999999999999999999985 344479999999999999999999999999999998


Q ss_pred             hhHH----HHHHHHHHhhcccCCCCcccccCCccccccCCcCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015836          126 SYVL----QYVVELQRRLTAAGVNEVWQSEGDTNRRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEI  201 (399)
Q Consensus       126 ~~v~----~fl~~L~~rL~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~LPFEfrALEa~L~~v~s~Le~e~~~Le~  201 (399)
                      +.+.    .|+++|+.||...+                           ...+|||||||||||++||+.|++++..+++
T Consensus        96 ~~~~~~~~~f~~~l~~~l~~~~---------------------------~~~lPFEfraLEa~L~~v~~~Le~e~~~l~~  148 (261)
T 3rkg_A           96 PSAAAKLSVLMYDLESKLSSTK---------------------------NNSQFYEHRALESIFINVMSALETDFKLHSQ  148 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSS---------------------------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhHHHHHHHHHHHhccCC---------------------------CCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7765    69999999997542                           1359999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccChhhHHHHHHHhhhHHHHHHHHHHHHHHHHHhhCCHHHHhhcccccccccccccccCccccccccCC
Q 015836          202 EAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMEASFYGDQSVLGYRSN  281 (399)
Q Consensus       202 ~~~~~Ld~L~~~Is~~~LerLr~lK~rL~~l~~rvq~VRd~LeelLddDeDMa~MyLT~k~~~~~~~~~~~~~~~~~~~~  281 (399)
                      .++++|++|+++|++.+|++|+..|++|++|++||++||++|+++||||+||++||||+|+..                 
T Consensus       149 ~~~~~L~~L~~~i~~~~L~~Ll~~~k~L~~~~~kv~~vr~~leelLddDeDm~~myLT~k~~~-----------------  211 (261)
T 3rkg_A          149 ICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKSP-----------------  211 (261)
T ss_dssp             HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHTCCSSCCCT-----------------
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCHHHHHHhhccCCCCC-----------------
Confidence            999999999999999999999999999999999999999999999999999999999998521                 


Q ss_pred             CccccCCCCCCCCCCCchhhhhhhhhhhhhccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhh
Q 015836          282 DIQSISAPVSPVSSPPDTRKLEKSLSIARSRHESMRSSDSTTDSVEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFI  361 (399)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~eElEmLLEaYf~qiD~~~~~l~~L~e~IddTEd~I  361 (399)
                                                               .++|+|+|||||+||+|+|+++|++++|++||+||||+|
T Consensus       212 -----------------------------------------~~d~eElEmLLE~Y~~q~d~~~~~~~~L~~~I~~TEe~i  250 (261)
T 3rkg_A          212 -----------------------------------------KDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIV  250 (261)
T ss_dssp             -----------------------------------------TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------------------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                     358999999999999999999999999999999999999


Q ss_pred             HHhcccCcccccch
Q 015836          362 NIQLVCFFSIDNKL  375 (399)
Q Consensus       362 nI~LD~~~~~RN~L  375 (399)
                      ||+||+   +||+|
T Consensus       251 ~i~LD~---~RN~L  261 (261)
T 3rkg_A          251 NIILDA---NRNSL  261 (261)
T ss_dssp             HHHHHH---TC---
T ss_pred             HHHHhh---hccCC
Confidence            999999   99986
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii} Back     alignment and structure
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A Back     alignment and structure
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A Back     alignment and structure
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A* Back     alignment and structure
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
d2bbha1232 Magnesium transport protein CorA, soluble domain { 89.04
>d2bbha1 d.328.1.1 (A:13-244) Magnesium transport protein CorA, soluble domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: CorA soluble domain-like
superfamily: CorA soluble domain-like
family: CorA soluble domain-like
domain: Magnesium transport protein CorA, soluble domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.04  E-value=1.6  Score=37.30  Aligned_cols=170  Identities=15%  Similarity=0.119  Sum_probs=95.2

Q ss_pred             cceEEEECCCCCeEEEEeehhhhhhhcCCCCCcccCc-CCCCCCCceeeecCCee--------------Eeecccceeee
Q 015836           49 LRSWIRVDVSGNSQIIEVDKFSMMRRCDLPARDLRLL-DPLFVYPSTILGREKAI--------------VVNLEQIRCII  113 (399)
Q Consensus        49 ~r~w~~~D~~G~~~~~e~~K~~l~~~~gL~~RDLR~L-Dp~~~~PssIl~R~~aI--------------lvnLe~IrAII  113 (399)
                      .-.|+-++.-++...    =..|...+||++--+--+ ++. ..| .+-.-++++              -+...+|..++
T Consensus        46 ~~~Widi~~~~~~e~----l~~l~~~f~i~~l~led~l~~~-~rp-k~e~~~~~~fiil~~~~~~~~~~~~~~~~l~i~l  119 (232)
T d2bbha1          46 TPTWINITGIHRTDV----VQRVGEFFGTHPLVLEDILNVH-QRP-KVEFFENYVFIVLKMFTYDKNLHELESEQVSLIL  119 (232)
T ss_dssp             SCEEEEEECTTCHHH----HHHHHHHHTCCHHHHHHHHCTT-CCC-EEEECSSEEEEEEEEEECCC--CCCEEEEEEEEE
T ss_pred             CcEEEEeCCCCCHHH----HHHHHHHcCcCHhHHHHHhCcc-cCC-ceEEeCCEEEEEEEeecccCCCCcceeEEEEEEE
Confidence            457777754433221    133677889988665422 222 112 233333332              23445777888


Q ss_pred             ecCeeEeecCCChhHHHHHHHHHHhhcccCCCCcccccCCccccccCCcCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 015836          114 TADEVLLLNSLDSYVLQYVVELQRRLTAAGVNEVWQSEGDTNRRRSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLD  193 (399)
Q Consensus       114 t~d~VLLfd~~~~~v~~fl~~L~~rL~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~LPFEfrALEa~L~~v~s~Le  193 (399)
                      +.+.|+-|.....   .++..+..++......-                        ...-|-  ..+-++|..++..+.
T Consensus       120 ~~~~lITv~~~~~---~~~~~v~~~~~~~~~~~------------------------~~~~~~--~ll~~lld~ivd~y~  170 (232)
T d2bbha1         120 TKNCVLMFQEKIG---DVFDPVRERIRYNRGII------------------------RKKRAD--YLLYSLIDALVDDYF  170 (232)
T ss_dssp             ETTEEEEEESSSC---CSCHHHHHHHHTTCTTG------------------------GGSCHH--HHHHHHHHHHHHHHH
T ss_pred             ECCEEEEEecCCC---chHHHHHHHHHhCcccc------------------------ccCCHH--HHHHHHHHHHHHHHH
Confidence            8888777764321   12334444443321100                        000011  355666777777776


Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhhHHHHHHHhhhHHHHHHHHHHHHHHHHHhhCCHHHH
Q 015836          194 SQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDM  253 (399)
Q Consensus       194 ~e~~~Le~~~~~~Ld~L~~~Is~~~LerLr~lK~rL~~l~~rvq~VRd~LeelLddDeDM  253 (399)
                      .-+..++..+..+=+.+-++-+...++++..+|+.+..+..-+.-.|++|..|+.+|.++
T Consensus       171 ~~l~~l~~~id~lE~~v~~~~~~~~l~~i~~lrr~l~~lrr~l~p~revl~~L~r~~~~l  230 (232)
T d2bbha1         171 VLLEKIDDEIDVLEEEVLERPEKETVQRTHQLKRNLVELRKTIWPLREVLSSLYRDVPPL  230 (232)
T ss_dssp             HHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence            666666666444323333333455689999999999999999999999999999888765