Citrus Sinensis ID: 015848

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
MEKLQGPINPYFLGDHLSVECFEQEFINTGALRFEFEEEDEEGPQFTTTPSLEDKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQIRAKQSQFSKSPPITREKRKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKVLVSIPFDEPF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccHHHHHHHccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccHHHHHHcccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccEEEEEEEccccccHHHHHHHHHHccccEEEEEEEEEcccEEEEEEEEEEEEcccccccc
cccccccccccccccccccEEEEEEEcccccEEcccccccHcccHHcccccHHccccHHHHccccccccccccccccHHHHHHHHHccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHcccEEEEEEEEEcccEEEEEEEEEEEEEEcccccc
meklqgpinpyflgdhlsvecFEQEfintgalrfefeeedeegpqftttpsledkmPFLQMlqsvgtpsvfpfkepnfqTLLRLQHLkkpwelvspfmpeMEETQIQALEFEscvtqetldlhspvkletkdlqnphsvtscieglssesnqehiqvqpnsdsvinithppqqqirakqsqfsksppitrekrkrkrtkpiknkeEVESQRMTHIAVERNRRRQMNDHLNTlrslmppayvqrgdqasiIGGAIDFVKELEQLLQSLEAQKRMrmgttsaatlegcdsatsttttttttdKAILSnvysmsrpeigncEEKMKAESKLDGAEIEVIVIHNhvnlkihcprrpGQLLKAIVALEDLRLTFLHLNitssettvhYSFNLKVLVSIPFDEPF
meklqgpinpyFLGDHLSVECFEQEFINTGALRFEFEEEDEEGPQFTTTPSLEDKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQETLDLHSpvkletkdlqnphSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQqirakqsqfsksppitrekrkrkrtkpiknkeevesqrmthiavernrrrqMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTtsaatlegcdsatsttttttttdkailsnvysmsrpeIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITssettvhysfNLKVLvsipfdepf
MEKLQGPINPYFLGDHLSVECFEQEFINTGALRfefeeedeeGPQFTTTPSLEDKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQIRAKQSQFSKSPpitrekrkrkrtkpiknkeEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKeleqllqsleaqKRMRMGTTSAATLEGCDSAtsttttttttDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKVLVSIPFDEPF
*******INPYFLGDHLSVECFEQEFINTGALRFEF*********************FLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQETLDL*******************************************************************************************************************PAYVQRGDQASIIGGAIDFVKELEQLL*****************************************************************GAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKVLVSIPF****
********NPYFLGDHLSVECFE*******************************************************************************************************************************************************************************************************R**NDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQ**************************************************PE********************VIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKVLVSIPFD***
MEKLQGPINPYFLGDHLSVECFEQEFINTGALRFEF************TPSLEDKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHP*****************************************MTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKVLVSIPFDEPF
***LQGPINPYFLGDHLSVECFEQEFINTGALRFEF***********TTPSLEDKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMP*********L*FESCVTQETLDLHSP*************************************************************************************R*THIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKR******************************************************KLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKVLVSIPFD**F
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MEKLQGPINPYFLGDHLSVECFEQEFINTGALRFEFEEEDEEGPQFTTTPSLEDKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQIRAKQSQFSKSPPITREKRKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKVLVSIPFDEPF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query399 2.2.26 [Sep-21-2011]
Q700E4358 Transcription factor bHLH yes no 0.779 0.868 0.394 1e-57
O81037371 Transcription factor bHLH no no 0.746 0.803 0.452 9e-56
Q9M128315 Transcription factor bHLH no no 0.691 0.876 0.392 9e-49
Q56YJ8414 Transcription factor FAMA no no 0.511 0.492 0.524 4e-47
Q9C7T4320 Transcription factor bHLH no no 0.431 0.537 0.479 3e-41
Q9SK91304 Transcription factor bHLH no no 0.433 0.569 0.478 3e-38
Q9M8K6202 Transcription factor MUTE no no 0.423 0.836 0.439 2e-29
Q56XR0327 Transcription factor bHLH no no 0.471 0.574 0.407 3e-25
Q9FKQ6296 Transcription factor bHLH no no 0.421 0.567 0.378 7e-21
Q700C7364 Transcription factor SPEE no no 0.162 0.178 0.646 4e-20
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2 SV=1 Back     alignment and function desciption
 Score =  224 bits (570), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/411 (39%), Positives = 212/411 (51%), Gaps = 100/411 (24%)

Query: 1   MEKLQGPINPYFLGDHLSVECFE-QEFINTGALRFEFEEEDEEGPQFTTTPSLEDKMPFL 59
           ME+ QG INP F      V   E Q F    A  F F+E++EE        SL+D +PFL
Sbjct: 1   MERFQGHINPCFFDRKPDVRSLEVQGF--AEAQSFAFKEKEEE--------SLQDTVPFL 50

Query: 60  QMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQET 119
           QMLQS    S F  KEPNF TLL LQ LK+PWEL                  E  ++ E 
Sbjct: 51  QMLQSEDPSSFFSIKEPNFLTLLSLQTLKEPWEL------------------ERYLSLED 92

Query: 120 LDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQIRAKQ 179
              HSPV+ ET            +EG +   + + I               P  Q     
Sbjct: 93  SQFHSPVQSETNRF---------MEGANQAVSSQEI---------------PFSQANMTL 128

Query: 180 SQFSKSPPITREKRKRK-----------------RTKPIKNKEEVESQRMTHIAVERNRR 222
              + SP     +RKRK                 +TKP KN EE+E+QR+ HIAVERNRR
Sbjct: 129 PSSTSSPLSAHSRRKRKINHLLPQEMTREKRKRRKTKPSKNNEEIENQRINHIAVERNRR 188

Query: 223 RQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAA- 281
           RQMN+H+N+LR+L+PP+Y+QRGDQASI+GGAI++VK LEQ++QSLE+QKR +  + S   
Sbjct: 189 RQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKRTQQQSNSEVV 248

Query: 282 --TLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIH 339
              L      +S    TT  D+  +                           +IE  VI 
Sbjct: 249 ENALNHLSGISSNDLWTTLEDQTCI--------------------------PKIEATVIQ 282

Query: 340 NHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITS-SETTVHYSFNLKV 389
           NHV+LK+ C ++ GQLLK I++LE L+LT LHLNIT+ S ++V YSFNLK+
Sbjct: 283 NHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKM 333

Arabidopsis thaliana (taxid: 3702)
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1 Back     alignment and function description
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1 Back     alignment and function description
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1 Back     alignment and function description
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1 Back     alignment and function description
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2 Back     alignment and function description
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1 Back     alignment and function description
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1 SV=1 Back     alignment and function description
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2 SV=1 Back     alignment and function description
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
255548057400 DNA binding protein, putative [Ricinus c 0.914 0.912 0.592 1e-106
359489477419 PREDICTED: transcription factor bHLH70-l 0.949 0.904 0.569 1e-104
356520219384 PREDICTED: transcription factor bHLH70-l 0.892 0.927 0.554 7e-99
147785077 590 hypothetical protein VITISV_028014 [Viti 0.942 0.637 0.555 4e-98
296089016356 unnamed protein product [Vitis vinifera] 0.799 0.896 0.587 8e-89
356560225379 PREDICTED: transcription factor bHLH70-l 0.864 0.910 0.524 2e-86
449432974358 PREDICTED: transcription factor bHLH67-l 0.786 0.877 0.5 2e-73
297817528357 basic helix-loop-helix family protein [A 0.774 0.865 0.395 5e-56
18412203358 transcription factor bHLH67 [Arabidopsis 0.779 0.868 0.394 8e-56
224128065292 predicted protein [Populus trichocarpa] 0.421 0.575 0.613 9e-56
>gi|255548057|ref|XP_002515085.1| DNA binding protein, putative [Ricinus communis] gi|223545565|gb|EEF47069.1| DNA binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/398 (59%), Positives = 285/398 (71%), Gaps = 33/398 (8%)

Query: 1   MEKLQGPINPYFLGDHLSVECFEQEFINTGALRFEFEEEDEEGPQFT--TTPSLEDKMPF 58
           ME++QGPI+P FLG+ L VE  ++EF NTG+LRF+ EEE+EE  + T    PSLEDKMPF
Sbjct: 1   MERVQGPIDPCFLGERLDVEGLQREFANTGSLRFQEEEEEEEEEEETQLLMPSLEDKMPF 60

Query: 59  LQMLQSVGTPSVFPFKEPNFQTLLRLQHLKK--PWELVSPFMPEMEETQIQA--LEFESC 114
           LQMLQSV  P  FP KEPNFQTLL+LQHLKK  PW++ + ++ E E   IQA  LE ESC
Sbjct: 61  LQMLQSVEYPPFFPIKEPNFQTLLKLQHLKKQQPWDMTT-YITETETRHIQAAALEHESC 119

Query: 115 VTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQ 174
           VT +  DLHSPVK E++DL+NPHS  S +E +S E+N + ++V  +S S         QQ
Sbjct: 120 VTHDIPDLHSPVKSESQDLRNPHS-NSYLEEVSREANNQTVRVNSDSSSFPWTI----QQ 174

Query: 175 IRAKQSQFSKSPP--ITREKRKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTL 232
                + FSKS P  + RE+RKRKRT+P KNKEEVESQRMTHIAVERNRRRQMNDHLN+L
Sbjct: 175 TMLSDTHFSKSSPLLVPRERRKRKRTRPTKNKEEVESQRMTHIAVERNRRRQMNDHLNSL 234

Query: 233 RSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAATLEGCDSATST 292
           RSLMPP+YVQRGDQASIIGGAIDFVKELEQLLQSLEAQ+R R    + A +         
Sbjct: 235 RSLMPPSYVQRGDQASIIGGAIDFVKELEQLLQSLEAQRRTRKPEEAEAGI--------- 285

Query: 293 TTTTTTTDKAILSN-VYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRR 351
                     I SN ++++     GNCEE+ K +   +  EIEV  +HNHVNLKI C R+
Sbjct: 286 ---------GISSNGLFTLQSDCNGNCEEESKVKRISEVGEIEVTAVHNHVNLKIQCHRK 336

Query: 352 PGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKV 389
           PG LL+AI ALE+LRL+ LHLNITSSETTV YSFNLK+
Sbjct: 337 PGLLLRAIFALEELRLSVLHLNITSSETTVLYSFNLKI 374

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359489477|ref|XP_002267819.2| PREDICTED: transcription factor bHLH70-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520219|ref|XP_003528761.1| PREDICTED: transcription factor bHLH70-like [Glycine max] Back     alignment and taxonomy information
>gi|147785077|emb|CAN75452.1| hypothetical protein VITISV_028014 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296089016|emb|CBI38719.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356560225|ref|XP_003548394.1| PREDICTED: transcription factor bHLH70-like [Glycine max] Back     alignment and taxonomy information
>gi|449432974|ref|XP_004134273.1| PREDICTED: transcription factor bHLH67-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297817528|ref|XP_002876647.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] gi|297322485|gb|EFH52906.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18412203|ref|NP_567121.1| transcription factor bHLH67 [Arabidopsis thaliana] gi|75294405|sp|Q700E4.1|BH067_ARATH RecName: Full=Transcription factor bHLH67; AltName: Full=Basic helix-loop-helix protein 67; Short=AtbHLH67; Short=bHLH 67; AltName: Full=Transcription factor EN 11; AltName: Full=bHLH transcription factor bHLH067 gi|45935017|gb|AAS79543.1| At3g61950 [Arabidopsis thaliana] gi|46367456|emb|CAG25854.1| hypothetical protein [Arabidopsis thaliana] gi|332646762|gb|AEE80283.1| transcription factor bHLH67 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224128065|ref|XP_002320235.1| predicted protein [Populus trichocarpa] gi|222861008|gb|EEE98550.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
TAIR|locus:2116977315 AT4G01460 "AT4G01460" [Arabido 0.431 0.546 0.478 8.5e-43
TAIR|locus:2044387371 AT2G46810 "AT2G46810" [Arabido 0.476 0.512 0.359 4.6e-40
TAIR|locus:2079512358 AT3G61950 "AT3G61950" [Arabido 0.541 0.603 0.312 3.8e-36
TAIR|locus:2093746414 FMA "AT3G24140" [Arabidopsis t 0.824 0.794 0.338 5.7e-36
UNIPROTKB|Q6K4B1351 OJ1595_D08.4 "Os09g0468700 pro 0.461 0.524 0.427 2.9e-32
UNIPROTKB|Q8H7N8329 OJ1217B09.8 "BHLH transcriptio 0.461 0.559 0.442 3.8e-30
TAIR|locus:2207061320 AT1G72210 "AT1G72210" [Arabido 0.431 0.537 0.418 7.9e-30
UNIPROTKB|Q6YTU1363 P0419H09.4 "cDNA clone:002-131 0.461 0.506 0.417 2.1e-29
UNIPROTKB|Q6ZGS3373 OJ1148_D05.9 "Putative basic-h 0.132 0.142 0.811 2.6e-29
TAIR|locus:2009537304 AT1G22490 "AT1G22490" [Arabido 0.423 0.555 0.423 5.6e-29
TAIR|locus:2116977 AT4G01460 "AT4G01460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 388 (141.6 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 88/184 (47%), Positives = 112/184 (60%)

Query:   206 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 265
             EVE+QRMTHIAVERNRRRQMN+HLN+LRSLMPP+++QRGDQASI+GGAIDF+K       
Sbjct:   109 EVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQ 168

Query:   266 XXXXXKRMRMGTTSAATLEGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIGNCEEKMKAE 325
                  KR + GT        C S+               S++ S+S         +    
Sbjct:   169 SLEAEKR-KDGTDETPKTASCSSSSSLACTN--------SSISSVSTTSENGFTARFGGG 219

Query:   326 SKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSF 385
                D  E+E  VI NHV+LK+ C R   Q+LKAIV++E+L+L  LHL I+SS   V YSF
Sbjct:   220 ---DTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSF 276

Query:   386 NLKV 389
             NLK+
Sbjct:   277 NLKM 280
GO:0003677 "DNA binding" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS
TAIR|locus:2044387 AT2G46810 "AT2G46810" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079512 AT3G61950 "AT3G61950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093746 FMA "AT3G24140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6K4B1 OJ1595_D08.4 "Os09g0468700 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q8H7N8 OJ1217B09.8 "BHLH transcription factor" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2207061 AT1G72210 "AT1G72210" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6YTU1 P0419H09.4 "cDNA clone:002-131-D10, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ZGS3 OJ1148_D05.9 "Putative basic-helix-loop-helix transcription factor" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2009537 AT1G22490 "AT1G22490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00026175001
SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (298 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
pfam0001052 pfam00010, HLH, Helix-loop-helix DNA-binding domai 4e-13
cd0008360 cd00083, HLH, Helix-loop-helix domain, found in sp 5e-12
smart0035353 smart00353, HLH, helix loop helix domain 7e-09
>gnl|CDD|215654 pfam00010, HLH, Helix-loop-helix DNA-binding domain Back     alignment and domain information 
 Score = 62.9 bits (154), Expect = 4e-13
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query: 210 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELE 261
           +R  H   ER RR ++ND    LR L+P    ++  +A I+  AI+++K L+
Sbjct: 1   RRKAHNERERRRRDRINDAFEELRELLPTPPNKKLSKAEILRLAIEYIKHLQ 52

Length = 52
>gnl|CDD|238036 cd00083, HLH, Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long Back     alignment and domain information
>gnl|CDD|197674 smart00353, HLH, helix loop helix domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 399
PF0001055 HLH: Helix-loop-helix DNA-binding domain only nucl 99.36
cd0008360 HLH Helix-loop-helix domain, found in specific DNA 99.33
smart0035353 HLH helix loop helix domain. 99.26
KOG1318411 consensus Helix loop helix transcription factor EB 98.9
KOG1319229 consensus bHLHZip transcription factor BIGMAX [Tra 98.55
KOG4304250 consensus Transcriptional repressors of the hairy/ 98.16
KOG3960284 consensus Myogenic helix-loop-helix transcription 98.13
KOG2483232 consensus Upstream transcription factor 2/L-myc-2 98.08
KOG2588 953 consensus Predicted DNA-binding protein [Transcrip 98.02
KOG3561 803 consensus Aryl-hydrocarbon receptor nuclear transl 97.99
cd0489775 ACT_ACR_3 ACT domain-containing protein which is c 97.88
cd0489572 ACT_ACR_1 ACT domain-containing protein which is c 97.88
cd0492776 ACT_ACR-like_2 Second ACT domain, of a novel type 97.83
cd0490073 ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, 97.69
cd0489675 ACT_ACR-like_3 ACT domain-containing protein which 97.65
KOG4029228 consensus Transcription factor HAND2/Transcription 97.48
cd0492574 ACT_ACR_2 ACT domain-containing protein which is c 97.41
cd0492868 ACT_TyrKc Uncharacterized, N-terminal ACT domain o 97.27
cd0489970 ACT_ACR-UUR-like_2 C-terminal ACT domains of the b 97.16
KOG0561 373 consensus bHLH transcription factor [Transcription 97.13
cd0492672 ACT_ACR_4 C-terminal ACT domain, of a novel type o 97.07
PLN0321793 transcription factor ATBS1; Provisional 96.97
KOG4447173 consensus Transcription factor TWIST [Transcriptio 96.91
cd0487370 ACT_UUR-ACR-like ACT domains of the bacterial sign 96.5
PF1374076 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A. 96.49
PF0184266 ACT: ACT domain; InterPro: IPR002912 The ACT domai 96.35
PF1329180 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A. 96.28
cd0489377 ACT_GcvR_1 ACT domains that comprise the Glycine C 96.14
PRK05007884 PII uridylyl-transferase; Provisional 95.9
KOG3910632 consensus Helix loop helix transcription factor [T 95.71
PRK00275895 glnD PII uridylyl-transferase; Provisional 95.41
cd0487574 ACT_F4HF-DF N-terminal ACT domain of formyltetrahy 95.19
PRK0019490 hypothetical protein; Validated 95.15
cd0486981 ACT_GcvR_2 ACT domains that comprise the Glycine C 95.12
PRK04374869 PII uridylyl-transferase; Provisional 95.11
cd0487288 ACT_1ZPV ACT domain proteins similar to the yet un 95.05
PRK03381774 PII uridylyl-transferase; Provisional 95.0
cd0488673 ACT_ThrD-II-like C-terminal ACT domain of biodegra 94.99
PRK03059856 PII uridylyl-transferase; Provisional 94.98
PRK05092931 PII uridylyl-transferase; Provisional 94.94
cd0488774 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-te 94.93
PRK01759854 glnD PII uridylyl-transferase; Provisional 94.67
PRK03381 774 PII uridylyl-transferase; Provisional 94.58
TIGR01693850 UTase_glnD [Protein-PII] uridylyltransferase. This 94.3
TIGR01693 850 UTase_glnD [Protein-PII] uridylyltransferase. This 94.26
PRK01759 854 glnD PII uridylyl-transferase; Provisional 94.26
PRK05007 884 PII uridylyl-transferase; Provisional 93.97
PRK00275 895 glnD PII uridylyl-transferase; Provisional 93.96
PRK03059 856 PII uridylyl-transferase; Provisional 93.95
cd0487671 ACT_RelA-SpoT ACT domain found C-terminal of the R 93.8
cd0211660 ACT ACT domains are commonly involved in specifica 93.55
cd0487075 ACT_PSP_1 CT domains found N-terminal of phosphose 93.47
cd0487774 ACT_TyrR N-terminal ACT domain of the TyrR protein 93.38
cd0488876 ACT_PheB-BS C-terminal ACT domain of a small (~147 93.15
COG2844867 GlnD UTP:GlnB (protein PII) uridylyltransferase [P 93.07
PRK05092 931 PII uridylyl-transferase; Provisional 93.02
PRK04374 869 PII uridylyl-transferase; Provisional 93.01
cd0487472 ACT_Af1403 N-terminal ACT domain of the yet unchar 92.56
cd0488179 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-termin 92.49
PRK04435147 hypothetical protein; Provisional 92.45
KOG3898254 consensus Transcription factor NeuroD and related 92.25
KOG3560 712 consensus Aryl-hydrocarbon receptor [Transcription 91.99
cd0487872 ACT_AHAS N-terminal ACT domain of the Escherichia 91.77
cd0488956 ACT_PDH-BS-like C-terminal ACT domain of the monof 91.12
cd0489469 ACT_ACR-like_1 ACT domain-containing protein which 91.07
cd0487971 ACT_3PGDH-like ACT_3PGDH-like CD includes the C-te 91.0
cd0490371 ACT_LSD C-terminal ACT domain of the L-serine dehy 90.5
cd0490580 ACT_CM-PDT C-terminal ACT domain of the bifunction 90.26
cd0488075 ACT_AAAH-PDT-like ACT domain of the nonheme iron-d 90.13
PRK08577136 hypothetical protein; Provisional 89.15
PRK07334403 threonine dehydratase; Provisional 88.08
PRK13011 286 formyltetrahydrofolate deformylase; Reviewed 88.02
PRK06027 286 purU formyltetrahydrofolate deformylase; Reviewed 87.28
cd0488265 ACT_Bt0572_2 C-terminal ACT domain of a novel prot 86.8
cd0490866 ACT_Bt0572_1 N-terminal ACT domain of a novel prot 86.62
cd0490969 ACT_PDH-BS C-terminal ACT domain of the monofuncti 86.54
KOG3558 768 consensus Hypoxia-inducible factor 1/Neuronal PAS 85.85
cd0493190 ACT_PAH ACT domain of the nonheme iron-dependent a 85.04
cd0488372 ACT_AcuB C-terminal ACT domain of the Bacillus sub 84.64
KOG4395285 consensus Transcription factor Atonal, contains HT 84.23
cd0488472 ACT_CBS C-terminal ACT domain of the cystathionine 83.94
cd0490474 ACT_AAAH ACT domain of the nonheme iron-dependent, 83.8
COG2844 867 GlnD UTP:GlnB (protein PII) uridylyltransferase [P 83.38
KOG3559 598 consensus Transcriptional regulator SIM1 [Transcri 82.49
cd0490273 ACT_3PGDH-xct C-terminal ACT (regulatory) domain o 81.01
>PF00010 HLH: Helix-loop-helix DNA-binding domain only nuclear translocator protein (Arnt) Back     alignment and domain information 
Probab=99.36  E-value=1.3e-12  Score=98.00  Aligned_cols=52  Identities=38%  Similarity=0.653  Sum_probs=48.4

Q ss_pred             hhchhhHHHHHHHHHHHHHHHHHHhcCCCC---CCCCCChhhhHHHHHHHHHHHH
Q 015848          210 QRMTHIAVERNRRRQMNDHLNTLRSLMPPA---YVQRGDQASIIGGAIDFVKELE  261 (399)
Q Consensus       210 ~r~~H~~~ER~RR~~mn~~~~~LrsLvP~~---~~~K~dKasIL~eAI~YIk~Lq  261 (399)
                      +|..|+..||+||.+||+.|..|+.+||..   ...|++|++||..||+||+.||
T Consensus         1 rR~~h~~~Er~RR~~i~~~~~~L~~llp~~~~~~~~k~~K~~iL~~ai~yI~~Lq   55 (55)
T PF00010_consen    1 RRQKHNERERRRRDRINDCFDELRELLPSCSAGSSRKLSKASILQKAIDYIKQLQ   55 (55)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCSSHHCCTTSSSSHHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhccchhccccccCCHHHHHHHHHHHHHHhC
Confidence            478899999999999999999999999995   4578999999999999999997

; InterPro: IPR011598 The helix-loop-helix (HLH) DNA-binding domain consists of a closed bundle of four helices in a left-handed twist with two crossover connections. The HLH domain directs dimerisation, and is juxtaposed to basic regions to create a DNA interaction interface surface that recognises specific DNA sequences. Basic region/HLH (bHLH) proteins regulate diverse biological pathways []. bHLH proteins include MyoD [], SREBPs (sterol regulatory element binding proteins) [], and yeast Pho4 (phosphatase system) []. In certain proteins the bHLH domain contains a leucine-zipper motif. The bHLH/leucine zipper (bHLHZip) domain specifies dimerisation within a network of proteins and determines sequence-specific DNA binding []. bHLHZip domains occur in the transcription factors Myc, Mad, Max and Usf [, ]. This entry is bHLHZip, which covers the bHLH domain and the leucine zipper motif, when present.; PDB: 1NLW_A 1NKP_D 1A93_A 2A93_A 1AM9_C 3U5V_A 1A0A_B 2QL2_C 1UKL_C 1AN4_B ....
>cd00083 HLH Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long Back     alignment and domain information
>smart00353 HLH helix loop helix domain Back     alignment and domain information
>KOG1318 consensus Helix loop helix transcription factor EB [Transcription] Back     alignment and domain information
>KOG1319 consensus bHLHZip transcription factor BIGMAX [Transcription] Back     alignment and domain information
>KOG4304 consensus Transcriptional repressors of the hairy/E(spl) family (contains HLH) [Transcription] Back     alignment and domain information
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription] Back     alignment and domain information
>KOG2483 consensus Upstream transcription factor 2/L-myc-2 protein [Transcription] Back     alignment and domain information
>KOG2588 consensus Predicted DNA-binding protein [Transcription] Back     alignment and domain information
>KOG3561 consensus Aryl-hydrocarbon receptor nuclear translocator [Transcription] Back     alignment and domain information
>cd04897 ACT_ACR_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04927 ACT_ACR-like_2 Second ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04900 ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, includes the first of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains Back     alignment and domain information
>cd04896 ACT_ACR-like_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>KOG4029 consensus Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1 [Transcription] Back     alignment and domain information
>cd04925 ACT_ACR_2 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04928 ACT_TyrKc Uncharacterized, N-terminal ACT domain of an Arabidopsis/Oryza predicted tyrosine kinase and other related ACT domains Back     alignment and domain information
>cd04899 ACT_ACR-UUR-like_2 C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains Back     alignment and domain information
>KOG0561 consensus bHLH transcription factor [Transcription] Back     alignment and domain information
>cd04926 ACT_ACR_4 C-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>PLN03217 transcription factor ATBS1; Provisional Back     alignment and domain information
>KOG4447 consensus Transcription factor TWIST [Transcription] Back     alignment and domain information
>cd04873 ACT_UUR-ACR-like ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD Back     alignment and domain information
>PF13740 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A Back     alignment and domain information
>PF01842 ACT: ACT domain; InterPro: IPR002912 The ACT domain is found in a variety of contexts and is proposed to be a conserved regulatory binding fold Back     alignment and domain information
>PF13291 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A Back     alignment and domain information
>cd04893 ACT_GcvR_1 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains Back     alignment and domain information
>PRK05007 PII uridylyl-transferase; Provisional Back     alignment and domain information
>KOG3910 consensus Helix loop helix transcription factor [Transcription] Back     alignment and domain information
>PRK00275 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04875 ACT_F4HF-DF N-terminal ACT domain of formyltetrahydrofolate deformylase (F4HF-DF; formyltetrahydrofolate hydrolase) Back     alignment and domain information
>PRK00194 hypothetical protein; Validated Back     alignment and domain information
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains Back     alignment and domain information
>PRK04374 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04872 ACT_1ZPV ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein Back     alignment and domain information
>PRK03381 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains Back     alignment and domain information
>PRK03059 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK05092 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04887 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI and related domains Back     alignment and domain information
>PRK01759 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK03381 PII uridylyl-transferase; Provisional Back     alignment and domain information
>TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase Back     alignment and domain information
>TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase Back     alignment and domain information
>PRK01759 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK05007 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK00275 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK03059 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04876 ACT_RelA-SpoT ACT domain found C-terminal of the RelA/SpoT domains Back     alignment and domain information
>cd02116 ACT ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme Back     alignment and domain information
>cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB) Back     alignment and domain information
>cd04877 ACT_TyrR N-terminal ACT domain of the TyrR protein Back     alignment and domain information
>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a Back     alignment and domain information
>COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05092 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK04374 PII uridylyl-transferase; Provisional Back     alignment and domain information
>cd04874 ACT_Af1403 N-terminal ACT domain of the yet uncharacterized, small (~133 a Back     alignment and domain information
>cd04881 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent, homoserine dehydrogenase (HSDH) and related domains Back     alignment and domain information
>PRK04435 hypothetical protein; Provisional Back     alignment and domain information
>KOG3898 consensus Transcription factor NeuroD and related HTH proteins [Transcription] Back     alignment and domain information
>KOG3560 consensus Aryl-hydrocarbon receptor [Transcription] Back     alignment and domain information
>cd04878 ACT_AHAS N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS) Back     alignment and domain information
>cd04889 ACT_PDH-BS-like C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) enzyme that catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate Back     alignment and domain information
>cd04894 ACT_ACR-like_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04879 ACT_3PGDH-like ACT_3PGDH-like CD includes the C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) Back     alignment and domain information
>cd04903 ACT_LSD C-terminal ACT domain of the L-serine dehydratase (LSD), iron-sulfur-dependent, beta subunit Back     alignment and domain information
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme Back     alignment and domain information
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information
>PRK08577 hypothetical protein; Provisional Back     alignment and domain information
>PRK07334 threonine dehydratase; Provisional Back     alignment and domain information
>PRK13011 formyltetrahydrofolate deformylase; Reviewed Back     alignment and domain information
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed Back     alignment and domain information
>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains Back     alignment and domain information
>cd04908 ACT_Bt0572_1 N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains Back     alignment and domain information
>cd04909 ACT_PDH-BS C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) Back     alignment and domain information
>KOG3558 consensus Hypoxia-inducible factor 1/Neuronal PAS domain protein NPAS1 [Signal transduction mechanisms; Transcription] Back     alignment and domain information
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH) Back     alignment and domain information
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB Back     alignment and domain information
>KOG4395 consensus Transcription factor Atonal, contains HTH domain [Transcription] Back     alignment and domain information
>cd04884 ACT_CBS C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria Back     alignment and domain information
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information
>COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3559 consensus Transcriptional regulator SIM1 [Transcription] Back     alignment and domain information
>cd04902 ACT_3PGDH-xct C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 2e-10
1nkp_A88 C-MYC, MYC proto-oncogene protein; transcription, 4e-10
1hlo_A80 Protein (transcription factor MAX); transcriptiona 1e-09
1am9_A82 Srebp-1A, protein (sterol regulatory element bindi 3e-09
1nlw_A80 MAD protein, MAX dimerizer; transcription factor, 7e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
1an4_A65 Protein (upstream stimulatory factor); protein-DNA 1e-06
1a0a_A63 BHLH, protein (phosphate system positive regulator 7e-06
1mdy_A68 Protein (MYOD BHLH domain); protein-DNA complex, t 6e-05
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Length = 83 Back     alignment and structure
 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 14/64 (21%), Positives = 32/64 (50%)

Query: 210 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEA 269
           +R  H A+ER RR  + D  ++LR  +P    ++  +A I+  A ++++ + +   + + 
Sbjct: 2   KRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQ 61

Query: 270 QKRM 273
               
Sbjct: 62  DIDD 65
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 Length = 88 Back     alignment and structure
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Length = 80 Back     alignment and structure
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C Length = 82 Back     alignment and structure
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1 Length = 80 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1 Length = 65 Back     alignment and structure
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1 Length = 63 Back     alignment and structure
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B* Length = 68 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
1am9_A82 Srebp-1A, protein (sterol regulatory element bindi 99.6
1hlo_A80 Protein (transcription factor MAX); transcriptiona 99.54
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 99.54
4h10_B71 Circadian locomoter output cycles protein kaput; B 99.51
1nkp_A88 C-MYC, MYC proto-oncogene protein; transcription, 99.49
1an4_A65 Protein (upstream stimulatory factor); protein-DNA 99.43
1nlw_A80 MAD protein, MAX dimerizer; transcription factor, 99.4
1a0a_A63 BHLH, protein (phosphate system positive regulator 99.4
4ati_A118 MITF, microphthalmia-associated transcription fact 99.39
4h10_A73 ARYL hydrocarbon receptor nuclear translocator-LI 99.38
3u5v_A76 Protein MAX, transcription factor E2-alpha chimer; 99.33
1mdy_A68 Protein (MYOD BHLH domain); protein-DNA complex, t 99.23
2ql2_B60 Neurod1, neurogenic differentiation factor 1; basi 99.14
4f3l_A 361 Mclock, circadian locomoter output cycles protein 98.82
4f3l_B 387 BMAL1B; BHLH, PAS, circadian rhythm proteins, tran 98.65
2lfh_A68 DNA-binding protein inhibitor ID-3; structural gen 98.5
4ath_A83 MITF, microphthalmia-associated transcription fact 98.09
4aya_A97 DNA-binding protein inhibitor ID-2; cell cycle; 2. 97.99
1zpv_A91 ACT domain protein; structural genomics, PSI, prot 96.23
2nyi_A 195 Unknown protein; protein structure initiative, PSI 95.61
1u8s_A 192 Glycine cleavage system transcriptional repressor, 95.56
2ko1_A88 CTR148A, GTP pyrophosphokinase; homodimer, alpha+b 95.27
2nyi_A195 Unknown protein; protein structure initiative, PSI 93.8
1u8s_A192 Glycine cleavage system transcriptional repressor, 92.35
3p96_A 415 Phosphoserine phosphatase SERB; ssgcid, structural 88.31
3obi_A 288 Formyltetrahydrofolate deformylase; structural gen 83.61
3n0v_A 286 Formyltetrahydrofolate deformylase; formyl transfe 83.57
3o1l_A 302 Formyltetrahydrofolate deformylase; structural gen 83.11
3nrb_A 287 Formyltetrahydrofolate deformylase; N-terminal ACT 82.93
3lou_A 292 Formyltetrahydrofolate deformylase; structural gen 82.3
2f1f_A 164 Acetolactate synthase isozyme III small subunit; f 81.96
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C Back     alignment and structure
Probab=99.60  E-value=1.4e-15  Score=122.88  Aligned_cols=66  Identities=23%  Similarity=0.379  Sum_probs=61.6

Q ss_pred             hhhchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015848          209 SQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRM  275 (399)
Q Consensus       209 s~r~~H~~~ER~RR~~mn~~~~~LrsLvP~~~~~K~dKasIL~eAI~YIk~Lq~~v~~Le~~~~~l~  275 (399)
                      .+|.+|+.+||+||.+||+.|..|++|||.. ..|+||++||.+||+||+.|+.+++.|+.+...+.
T Consensus         5 ~rr~~H~~~ErrRR~~in~~f~~L~~lvP~~-~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~~L~   70 (82)
T 1am9_A            5 EKRTAHNAIEKRYRSSINDKIIELKDLVVGT-EAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLR   70 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999984 48999999999999999999999999999887664
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Back     alignment and structure
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens} Back     alignment and structure
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1 Back     alignment and structure
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A Back     alignment and structure
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens} Back     alignment and structure
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A* Back     alignment and structure
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B* Back     alignment and structure
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus} Back     alignment and structure
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Back     alignment and structure
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Back     alignment and structure
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Back     alignment and structure
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus} Back     alignment and structure
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens} Back     alignment and structure
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7 Back     alignment and structure
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria} Back     alignment and structure
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5 Back     alignment and structure
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A Back     alignment and structure
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria} Back     alignment and structure
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5 Back     alignment and structure
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Back     alignment and structure
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris} Back     alignment and structure
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida} Back     alignment and structure
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV} Back     alignment and structure
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida} Back     alignment and structure
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei} Back     alignment and structure
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 399
d1mdya_68 a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus muscul 5e-15
d1nkpb_83 a.38.1.1 (B:) Max protein {Human (Homo sapiens) [T 5e-14
d1nkpa_88 a.38.1.1 (A:) Myc proto-oncogene protein {Human (H 4e-13
d1a0aa_63 a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Sa 6e-12
d1an4a_65 a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapien 2e-11
d1nlwa_79 a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [T 3e-11
d1am9a_80 a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxI 1e-10
d1uklc_61 a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId 1e-09
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 68 Back     information, alignment and structure

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myod B/HLH domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.2 bits (164), Expect = 5e-15
 Identities = 17/65 (26%), Positives = 30/65 (46%)

Query: 201 IKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKEL 260
           +K K     +R      ER R  ++N+   TL+        QR  +  I+  AI +++ L
Sbjct: 3   LKRKTTNADRRKAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGL 62

Query: 261 EQLLQ 265
           + LL+
Sbjct: 63  QALLR 67
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Length = 83 Back     information, alignment and structure
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 63 Back     information, alignment and structure
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]} Length = 65 Back     information, alignment and structure
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} Length = 80 Back     information, alignment and structure
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 61 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
d1am9a_80 SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} 99.54
d1mdya_68 Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10 99.51
d1nkpb_83 Max protein {Human (Homo sapiens) [TaxId: 9606]} 99.51
d1nlwa_79 Mad protein {Human (Homo sapiens) [TaxId: 9606]} 99.49
d1a0aa_63 Pho4 B/HLH domain {Baker's yeast (Saccharomyces ce 99.46
d1nkpa_88 Myc proto-oncogene protein {Human (Homo sapiens) [ 99.44
d1an4a_65 Usf B/HLH domain {Human (Homo sapiens) [TaxId: 960 99.34
d1uklc_61 SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} 99.26
d1zpva183 UPF0237 protein SP0238 {Streptococcus pneumoniae [ 96.54
d1u8sa186 putative transcriptional repressor VC2159 {Vibrio 96.44
d1u8sa293 putative transcriptional repressor VC2159 {Vibrio 93.86
d1y7pa277 Hypothetical protein AF1403, N-terminal domain {Ar 92.42
d2f06a270 Hypothetical protein BT0572 {Bacteroides thetaiota 91.96
d2f06a171 Hypothetical protein BT0572 {Bacteroides thetaiota 91.27
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-1a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.4e-15  Score=117.20  Aligned_cols=67  Identities=22%  Similarity=0.369  Sum_probs=61.3

Q ss_pred             hhhhchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015848          208 ESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRM  275 (399)
Q Consensus       208 es~r~~H~~~ER~RR~~mn~~~~~LrsLvP~~~~~K~dKasIL~eAI~YIk~Lq~~v~~Le~~~~~l~  275 (399)
                      ..+|..|+.+||+||.+||+.|..|++|||.. ..|++|++||..||+||+.|+.+++.|..+...+.
T Consensus         4 ~~kR~~H~~~Er~RR~~in~~~~~L~~llP~~-~~k~~K~~iL~~a~~yI~~L~~~~~~L~~e~~~lk   70 (80)
T d1am9a_           4 GEKRTAHNAIEKRYRSSINDKIIELKDLVVGT-EAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLR   70 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999985 57999999999999999999999999998877653
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure